Query 024753
Match_columns 263
No_of_seqs 303 out of 1600
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 13:51:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024753.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024753hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hqi_A Speckle-type POZ protei 100.0 2.1E-32 7.3E-37 239.5 17.8 186 28-232 123-309 (312)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 1.4E-32 5E-37 234.2 15.7 169 76-250 10-182 (256)
3 3htm_A Speckle-type POZ protei 100.0 3.4E-32 1.2E-36 218.1 15.4 153 79-232 16-169 (172)
4 3i3n_A Kelch-like protein 11; 100.0 5E-32 1.7E-36 233.7 15.5 179 76-260 11-213 (279)
5 4eoz_A Speckle-type POZ protei 100.0 2.5E-30 8.5E-35 201.6 7.4 137 81-218 9-145 (145)
6 2if5_A Zinc finger and BTB dom 99.9 8.7E-27 3E-31 176.0 12.4 113 78-192 6-119 (120)
7 1r29_A B-cell lymphoma 6 prote 99.9 2.8E-26 9.5E-31 175.0 12.8 117 76-195 8-126 (127)
8 2z8h_A Transcription regulator 99.9 2.1E-26 7.1E-31 178.2 10.9 121 76-200 15-137 (138)
9 2ppi_A Gigaxonin; BTB domain, 99.9 5.1E-26 1.8E-30 177.3 9.9 115 76-192 26-143 (144)
10 1buo_A POZ domain, protein (pr 99.9 1.7E-25 5.6E-30 169.3 12.3 113 77-195 8-120 (121)
11 3b84_A Zinc finger and BTB dom 99.9 4.6E-26 1.6E-30 171.8 9.1 112 78-195 5-117 (119)
12 2vpk_A Myoneurin; transcriptio 99.9 9.6E-26 3.3E-30 169.3 10.1 110 78-193 3-115 (116)
13 2yy9_A Zinc finger and BTB dom 99.9 5.8E-26 2E-30 175.1 8.6 117 77-199 5-122 (135)
14 2vkp_A BTB/POZ domain-containi 99.9 2E-25 6.8E-30 165.6 10.3 103 91-196 2-109 (109)
15 3ohu_A Transcription regulator 99.9 7.9E-26 2.7E-30 172.0 5.4 112 76-191 11-124 (125)
16 3ga1_A Nucleus accumbens-assoc 99.9 1.7E-25 6E-30 171.0 6.6 114 76-195 12-127 (129)
17 2q81_A MIZ-1 protein; BTB/POZ 99.9 4.2E-25 1.4E-29 166.6 7.5 109 78-193 8-117 (119)
18 2ihc_A Transcription regulator 99.9 1.5E-25 5E-30 170.3 4.8 113 77-193 9-123 (124)
19 3fkc_A Transcriptional regulat 99.9 4.1E-23 1.4E-27 155.0 12.0 106 76-186 10-115 (116)
20 3m5b_A Zinc finger and BTB dom 99.9 5.6E-23 1.9E-27 154.8 9.9 104 78-194 13-117 (119)
21 2ast_A S-phase kinase-associat 99.5 1.9E-13 6.4E-18 107.7 10.5 113 100-213 3-146 (159)
22 4ajy_C Transcription elongatio 99.3 9.5E-12 3.2E-16 89.7 8.6 81 100-181 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 4.8E-10 1.7E-14 86.2 10.5 99 100-203 4-128 (141)
24 2p1m_A SKP1-like protein 1A; F 99.0 1.7E-10 6E-15 90.6 5.0 107 100-210 6-142 (160)
25 1hv2_A Elongin C, ELC1; protei 98.6 2.1E-07 7.1E-12 66.9 7.8 81 99-181 5-99 (99)
26 3v7d_A Suppressor of kinetocho 98.5 6.2E-07 2.1E-11 70.8 10.8 101 99-200 8-137 (169)
27 3drz_A BTB/POZ domain-containi 98.5 7.7E-07 2.6E-11 64.9 9.8 95 99-194 7-106 (107)
28 2fnj_C Transcription elongatio 98.5 1.9E-07 6.5E-12 66.8 6.0 81 100-181 3-96 (96)
29 2eqx_A Kelch repeat and BTB do 98.2 1.8E-06 6.3E-11 62.6 5.2 64 193-260 5-79 (105)
30 1vcb_B Protein (elongin C); tu 98.1 8.7E-06 3E-10 59.7 6.4 82 99-181 18-112 (112)
31 3drx_A BTB/POZ domain-containi 97.5 0.00017 5.7E-09 58.0 6.7 96 99-195 13-113 (202)
32 3kvt_A Potassium channel prote 96.3 0.0014 4.7E-08 48.1 1.8 96 99-195 6-105 (115)
33 1s1g_A Potassium voltage-gated 96.2 0.012 4.3E-07 43.5 6.8 92 98-193 13-110 (124)
34 1nn7_A Potassium channel KV4.2 95.9 0.0073 2.5E-07 43.4 3.9 89 100-192 2-96 (105)
35 1t1d_A Protein (potassium chan 95.3 0.016 5.3E-07 41.2 3.8 85 100-185 3-90 (100)
36 2nz0_B Potassium voltage-gated 95.1 0.02 7E-07 43.2 4.1 94 97-194 34-133 (140)
37 2vkp_A BTB/POZ domain-containi 87.4 0.76 2.6E-05 32.2 4.5 30 196-225 77-106 (109)
38 2q81_A MIZ-1 protein; BTB/POZ 82.5 1.4 4.8E-05 31.5 4.1 30 196-225 88-117 (119)
39 2vpk_A Myoneurin; transcriptio 81.9 4 0.00014 28.7 6.4 30 196-225 86-115 (116)
40 1buo_A POZ domain, protein (pr 81.0 5 0.00017 28.5 6.7 31 196-226 89-119 (121)
41 1r29_A B-cell lymphoma 6 prote 80.9 4.2 0.00014 29.2 6.3 30 196-225 95-124 (127)
42 2if5_A Zinc finger and BTB dom 80.1 2.3 7.9E-05 30.2 4.5 29 196-224 91-119 (120)
43 2eqx_A Kelch repeat and BTB do 78.8 1.9 6.6E-05 30.3 3.6 59 166-225 10-80 (105)
44 2yy9_A Zinc finger and BTB dom 78.8 2.5 8.7E-05 30.9 4.5 34 195-228 86-120 (135)
45 2r9r_B Paddle chimera voltage 77.5 3.8 0.00013 37.5 6.1 86 99-185 53-141 (514)
46 3b84_A Zinc finger and BTB dom 75.0 1.8 6.3E-05 30.9 2.7 30 196-225 86-115 (119)
47 3htm_A Speckle-type POZ protei 74.9 2.4 8.2E-05 32.1 3.5 30 196-225 100-129 (172)
48 2ppi_A Gigaxonin; BTB domain, 72.8 2 6.7E-05 32.0 2.4 29 196-224 115-143 (144)
49 2z8h_A Transcription regulator 72.4 2.1 7.1E-05 31.5 2.5 30 196-225 101-130 (138)
50 3m5b_A Zinc finger and BTB dom 66.2 4.8 0.00016 28.8 3.3 31 195-225 86-116 (119)
51 3hqi_A Speckle-type POZ protei 61.5 17 0.0006 30.3 6.4 31 167-197 275-305 (312)
52 4eoz_A Speckle-type POZ protei 55.8 6.3 0.00021 28.7 2.4 30 196-225 91-120 (145)
53 3ga1_A Nucleus accumbens-assoc 54.3 2.2 7.6E-05 30.9 -0.4 31 195-225 95-125 (129)
54 3i3n_A Kelch-like protein 11; 47.9 14 0.00048 30.4 3.5 30 196-225 107-136 (279)
55 2plx_B Peptide inhibitor; heli 46.8 21 0.00073 17.5 2.6 21 203-223 3-23 (26)
56 3hve_A Gigaxonin; ubiquitin, c 45.7 17 0.00058 29.4 3.7 30 196-225 99-128 (256)
57 2ihc_A Transcription regulator 42.7 1.3 4.5E-05 32.0 -3.3 29 196-224 94-122 (124)
58 2ast_A S-phase kinase-associat 41.0 32 0.0011 25.8 4.3 37 187-225 87-123 (159)
59 1fs1_B SKP1, cyclin A/CDK2-ass 27.4 1.8E+02 0.006 21.1 6.9 79 146-226 24-119 (141)
60 2cmy_B Beta trypsin, veronica 25.7 47 0.0016 17.4 1.9 21 203-223 8-28 (34)
61 2p1m_A SKP1-like protein 1A; F 24.7 47 0.0016 24.9 2.8 31 196-226 93-123 (160)
No 1
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=100.00 E-value=2.1e-32 Score=239.49 Aligned_cols=186 Identities=25% Similarity=0.361 Sum_probs=151.2
Q ss_pred hcccCCCCceeeecccccceeEEEEeeecccccCCCCCCCCccccccccccCChHHHHHHHHHHhhCCCcccEEEEecCe
Q 024753 28 RQLKNNDDFVWAIEVPLTGKFIIDVEFLDLKIAPSDGGEPCSIWAEGITQKRSNATALASLGRMLTEGIHTDIIINASNG 107 (263)
Q Consensus 28 ~~l~~~d~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~ 107 (263)
.++. ||+++++|+|.+.+...... ......... .+++.+.++++.+++++.++||+|.++|+
T Consensus 123 ~yl~-dD~l~i~~~v~v~~~~~~~~--------~~~~~~~~~---------~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~ 184 (312)
T 3hqi_A 123 GLLP-DDKLTLFCEVSVVQDSVNIS--------GQNTMNMVK---------VPECRLADELGGLWENSRFTDCCLCVAGQ 184 (312)
T ss_dssp CCCG-GGCEEEEEEEEEEEECCCEE--------CCCCCSSCC---------CCCCCHHHHHHHHHHTTCSCCEEEEETTE
T ss_pred Ceec-CCEEEEEEEEEEEecccccc--------ccccccccC---------CCCchHHHHHHHHHhCCCCCceEEEECCE
Confidence 4777 89999999999876542111 000111111 22234678999999999999999999999
Q ss_pred EEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHHHhhCcHHHHHH
Q 024753 108 STGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALLRAADKYDICDLKEA 187 (263)
Q Consensus 108 ~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiYt~~~~~~~~~~~~~ll~~A~~~~~~~L~~~ 187 (263)
+|+|||.|||++||||++||.++++|+...+|.++++++++|+.+|+|+||+..... .+++.+|+.+|++|+++.|+..
T Consensus 185 ~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~-~~~~~~ll~~A~~~~~~~l~~~ 263 (312)
T 3hqi_A 185 EFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNL-DKMADDLLAAADKYALERLKVM 263 (312)
T ss_dssp EEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCCTTH-HHHHHHHHHHHHHTTCHHHHHH
T ss_pred EEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCCCCh-HHHHHHHHHHHHHhCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998843322 3899999999999999999999
Q ss_pred HHHHHHhcCChhhHHHHHHHHHhCCChHHHHHHHHHHH-HHHhhhc
Q 024753 188 CHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV-KFGKIFD 232 (263)
Q Consensus 188 c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~-~~~~v~~ 232 (263)
|+++|.+.++.+|+..++.+|++|++..|++.|++||. |+.++.+
T Consensus 264 c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~ 309 (312)
T 3hqi_A 264 CEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLE 309 (312)
T ss_dssp HHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999 8888865
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=1.4e-32 Score=234.17 Aligned_cols=169 Identities=22% Similarity=0.303 Sum_probs=146.1
Q ss_pred cccCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCC--cCCcceEEeCCCCHHHHHHHH
Q 024753 76 TQKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLK--EKELSTIDIPDMSIDACQAFL 153 (263)
Q Consensus 76 ~~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~--e~~~~~i~l~~~~~~~f~~lL 153 (263)
..+.|+..+.++++.+++++.+|||+|.++|++|+|||.||+++|+||++||.+++. |+....|.++++++++|+.+|
T Consensus 10 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll 89 (256)
T 3hve_A 10 SDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREIL 89 (256)
T ss_dssp CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999998877 677789999999999999999
Q ss_pred HhhcCC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhcCChhhHHHHHHHHHhCCChHHHHHHHHHHH-HHHhhh
Q 024753 154 SYIYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV-KFGKIF 231 (263)
Q Consensus 154 ~fiYt~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~-~~~~v~ 231 (263)
+|+||| ...+. +++.+++.+|++|+++.|+..|+++|.+.++++||+.++.+|..|++..|.+.|.+|+. ||.++.
T Consensus 90 ~~~Yt~~~~i~~--~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~ 167 (256)
T 3hve_A 90 DYIFSGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVS 167 (256)
T ss_dssp HHHHHSCCCCC---CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred hhccCCCCcccH--hHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh
Confidence 999987 43333 78999999999999999999999999999999999999999999999999999999999 999998
Q ss_pred ccccchHHHHhhCcHHHHH
Q 024753 232 DIRDDFSVFLQCADRELIA 250 (263)
Q Consensus 232 ~~~~~~~~fl~~~~~~l~~ 250 (263)
. .++|.+++...+..
T Consensus 168 ~----~~~f~~L~~~~l~~ 182 (256)
T 3hve_A 168 S----TEEFLELSPQKLKE 182 (256)
T ss_dssp T----CHHHHSSCHHHHHH
T ss_pred C----CcchhcCCHHHHHH
Confidence 7 78899887555543
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=100.00 E-value=3.4e-32 Score=218.14 Aligned_cols=153 Identities=27% Similarity=0.433 Sum_probs=138.6
Q ss_pred CChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhcC
Q 024753 79 RSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYG 158 (263)
Q Consensus 79 ~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiYt 158 (263)
.+++.+.+++..+++++.++||+|.++|++|+|||.||+++|+||++||.++++|+....|.++++++++|+.+|+|+||
T Consensus 16 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt 95 (172)
T 3htm_A 16 VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYT 95 (172)
T ss_dssp CCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhC
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhcCChhhHHHHHHHHHhCCChHHHHHHHHHHH-HHHhhhc
Q 024753 159 NIEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV-KFGKIFD 232 (263)
Q Consensus 159 ~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~-~~~~v~~ 232 (263)
+..... .+++.+++.+|++|+++.|++.|+++|.+.++.+|++.++.+|..|++..|++.|.+||. ||.++..
T Consensus 96 ~~~~~~-~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~ 169 (172)
T 3htm_A 96 GKAPNL-DKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLE 169 (172)
T ss_dssp SCCTTG-GGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-----
T ss_pred CCCCCc-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHc
Confidence 733322 378999999999999999999999999999999999999999999999999999999999 9988865
No 4
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.98 E-value=5e-32 Score=233.67 Aligned_cols=179 Identities=21% Similarity=0.274 Sum_probs=153.3
Q ss_pred cccCChHHHHHHHHHHhhCCCcccEEEEec---CeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeC------CCCH
Q 024753 76 TQKRSNATALASLGRMLTEGIHTDIIINAS---NGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIP------DMSI 146 (263)
Q Consensus 76 ~~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~---~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~------~~~~ 146 (263)
..+.|+..+.+.++.+++++.+|||+|+++ |++|+|||.||+++|+||++||.++++|+.+..|.++ ++++
T Consensus 11 ~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~ 90 (279)
T 3i3n_A 11 ECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEP 90 (279)
T ss_dssp ECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCH
T ss_pred CCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCH
Confidence 446788899999999999999999999998 8999999999999999999999999999999999998 8999
Q ss_pred HHHHHHHHhhcCC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhcCChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 147 DACQAFLSYIYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 147 ~~f~~lL~fiYt~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++|+.+|+|+||| ...+. +++.+++.+|++|+++.|+..|+++|.+.++++||+.++.+|..|++..|.+.|.+|+.
T Consensus 91 ~~f~~ll~~~Ytg~~~i~~--~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~ 168 (279)
T 3i3n_A 91 DTVEAVIEYMYTGRIRVST--GSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIR 168 (279)
T ss_dssp HHHHHHHHHHHHSEEEEET--TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCcCCcccCH--HHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 9999999999988 43333 78999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHhhhccccchHHHHhhCcHHHHH-------------HHHHHHHhcc
Q 024753 226 -KFGKIFDIRDDFSVFLQCADRELIA-------------EVFHEVLGAW 260 (263)
Q Consensus 226 -~~~~v~~~~~~~~~fl~~~~~~l~~-------------~l~~~~l~~~ 260 (263)
||.++.. .++|.+++...+.. ++++.++.|.
T Consensus 169 ~~f~~v~~----~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~ 213 (279)
T 3i3n_A 169 RNFHKVIQ----DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWV 213 (279)
T ss_dssp HTHHHHTT----SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHH
T ss_pred HHHHHHhc----CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHH
Confidence 9999987 77888876555442 4666666654
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.96 E-value=2.5e-30 Score=201.61 Aligned_cols=137 Identities=31% Similarity=0.455 Sum_probs=101.5
Q ss_pred hHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhcCCC
Q 024753 81 NATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGNI 160 (263)
Q Consensus 81 ~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiYt~~ 160 (263)
++.+.++++.+++++.++||+|.++|+.|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|+|||.
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~ 88 (145)
T 4eoz_A 9 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGK 88 (145)
T ss_dssp CCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCc
Confidence 34567999999999999999999999999999999999999999999999999888999999999999999999999873
Q ss_pred CccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhcCChhhHHHHHHHHHhCCChHHHH
Q 024753 161 EHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLERLQNAYLYQLPKLKS 218 (263)
Q Consensus 161 ~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~ 218 (263)
.... .+++.+++.+|++|+++.|+..|+++|.+.++.+|++.++.+|++|++..|++
T Consensus 89 ~~~~-~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 89 APNL-DKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp CTTG-GGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred cCCc-HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 3322 37899999999999999999999999999999999999999999999998874
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.94 E-value=8.7e-27 Score=176.00 Aligned_cols=113 Identities=24% Similarity=0.349 Sum_probs=101.0
Q ss_pred cCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhc
Q 024753 78 KRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIY 157 (263)
Q Consensus 78 ~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiY 157 (263)
+.|++.+.++++++++++.+|||+|.++|++|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|+|
T Consensus 6 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Y 85 (120)
T 2if5_A 6 PDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAY 85 (120)
T ss_dssp TTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHc
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CccccHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 024753 158 GNI-EHEEFLTHRLALLRAADKYDICDLKEACHDSL 192 (263)
Q Consensus 158 t~~-~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l 192 (263)
||. .... +++.+++.+|++|+++.|++.|+++|
T Consensus 86 t~~~~~~~--~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 86 TATLTVST--ANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HSCCCCCG--GGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 873 3333 78999999999999999999999987
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.94 E-value=2.8e-26 Score=174.96 Aligned_cols=117 Identities=26% Similarity=0.457 Sum_probs=107.3
Q ss_pred cccCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEe-CCCCHHHHHHHHH
Q 024753 76 TQKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDI-PDMSIDACQAFLS 154 (263)
Q Consensus 76 ~~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l-~~~~~~~f~~lL~ 154 (263)
..+.|+..+.++++.+++++.+|||+|.++|++|+|||.||+++|+||++||.+++.| ....|.+ +++++++|+.+|+
T Consensus 8 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~ 86 (127)
T 1r29_A 8 QFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLD 86 (127)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHH
Confidence 3456788899999999999999999999999999999999999999999999999988 7789999 9999999999999
Q ss_pred hhcCC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhc
Q 024753 155 YIYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVED 195 (263)
Q Consensus 155 fiYt~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 195 (263)
|+||| ...+. +++.+++.+|++|+++.|++.|+++|.++
T Consensus 87 ~~Ytg~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 87 FMYTSRLNLRE--GNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHcCCCcCcCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 99987 33433 78999999999999999999999999764
No 8
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.94 E-value=2.1e-26 Score=178.25 Aligned_cols=121 Identities=17% Similarity=0.291 Sum_probs=109.8
Q ss_pred cccCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeC-CCCHHHHHHHHH
Q 024753 76 TQKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIP-DMSIDACQAFLS 154 (263)
Q Consensus 76 ~~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~-~~~~~~f~~lL~ 154 (263)
..+.|+..+.++|+++++++.+|||+|.++|++|+|||.||+++|+||++||.+++.+. ..|.++ ++++++|+.+|+
T Consensus 15 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~ 92 (138)
T 2z8h_A 15 ESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQ 92 (138)
T ss_dssp CCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHH
Confidence 34677889999999999999999999999999999999999999999999999987663 678995 899999999999
Q ss_pred hhcCC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhcCChhh
Q 024753 155 YIYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKN 200 (263)
Q Consensus 155 fiYt~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n 200 (263)
|+||| ..... +++.+++.+|++|+++.|++.|+++|.+.++.+|
T Consensus 93 ~~Ytg~~~i~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 93 FAYTAKLILSK--DNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHHHSCCCCCT--TTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HhcCCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 99987 33433 7899999999999999999999999999988776
No 9
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.93 E-value=5.1e-26 Score=177.28 Aligned_cols=115 Identities=23% Similarity=0.333 Sum_probs=101.0
Q ss_pred cccCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCc--CCcceEEeCCCCHHHHHHHH
Q 024753 76 TQKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKE--KELSTIDIPDMSIDACQAFL 153 (263)
Q Consensus 76 ~~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e--~~~~~i~l~~~~~~~f~~lL 153 (263)
..+.+...+.++++++++++.+|||+|.++|++|+|||.||+++|+||++||.+++.+ +....|.++++++++|+.+|
T Consensus 26 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL 105 (144)
T 2ppi_A 26 SDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREIL 105 (144)
T ss_dssp CCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHH
Confidence 4567788999999999999999999999999999999999999999999999988765 66788999999999999999
Q ss_pred HhhcCC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 024753 154 SYIYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSL 192 (263)
Q Consensus 154 ~fiYt~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l 192 (263)
+|+||| ...+. +++.+++.+|++|+++.|++.|+++|
T Consensus 106 ~fiYtg~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 106 DYIFSGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHTTSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHhCCCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 999988 33333 78999999999999999999999875
No 10
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.93 E-value=1.7e-25 Score=169.28 Aligned_cols=113 Identities=25% Similarity=0.296 Sum_probs=101.9
Q ss_pred ccCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhh
Q 024753 77 QKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYI 156 (263)
Q Consensus 77 ~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fi 156 (263)
.+.+++.+.+.++++++++.+|||+|.++|++|+|||.||+++|+||++||.++ ..+|.++++++++|+.+|+|+
T Consensus 8 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~ 82 (121)
T 1buo_A 8 NPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYA 82 (121)
T ss_dssp CTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhh
Confidence 356788899999999999999999999999999999999999999999999764 468999999999999999999
Q ss_pred cCCCCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhc
Q 024753 157 YGNIEHEEFLTHRLALLRAADKYDICDLKEACHDSLVED 195 (263)
Q Consensus 157 Yt~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 195 (263)
|||..... .+++.+++.+|++|+++.|++.|+++|.+.
T Consensus 83 Ytg~~~~~-~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 83 YTATLQAK-AEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHSCCCCC-GGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cCCCcCCC-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 98733222 378999999999999999999999999764
No 11
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.93 E-value=4.6e-26 Score=171.85 Aligned_cols=112 Identities=19% Similarity=0.259 Sum_probs=99.9
Q ss_pred cCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhc
Q 024753 78 KRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIY 157 (263)
Q Consensus 78 ~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiY 157 (263)
+.|+..+.++++++++++.+|||+|.++|++|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+|
T Consensus 5 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iY 80 (119)
T 3b84_A 5 VQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFY 80 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHc
Confidence 356788899999999999999999999999999999999999999999998865 5789999999999999999999
Q ss_pred CC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhc
Q 024753 158 GN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVED 195 (263)
Q Consensus 158 t~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 195 (263)
|| ..... +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 81 tg~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 81 TGHLALTS--GNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred CCCCccCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 87 33333 78999999999999999999999988653
No 12
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.93 E-value=9.6e-26 Score=169.27 Aligned_cols=110 Identities=20% Similarity=0.284 Sum_probs=99.5
Q ss_pred cCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeC--CCCHHHHHHHHHh
Q 024753 78 KRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIP--DMSIDACQAFLSY 155 (263)
Q Consensus 78 ~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~lL~f 155 (263)
+.|+..+.++++++++++.+|||+|.++|++|+|||.||+++|+||++||.++ .+..|.++ ++++++|+.+|+|
T Consensus 3 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~ 78 (116)
T 2vpk_A 3 SHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEF 78 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999886 35678888 9999999999999
Q ss_pred hcCC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q 024753 156 IYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLV 193 (263)
Q Consensus 156 iYt~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 193 (263)
+||| ..... +++.+++.+|++|+++.|++.|+++|.
T Consensus 79 ~Yt~~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 79 IYTGTLNLDS--WNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HcCCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9987 33333 789999999999999999999999885
No 13
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.93 E-value=5.8e-26 Score=175.07 Aligned_cols=117 Identities=17% Similarity=0.234 Sum_probs=98.4
Q ss_pred ccCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhh
Q 024753 77 QKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYI 156 (263)
Q Consensus 77 ~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fi 156 (263)
.+.|...+.++|+++++++.+|||+|.++|++|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+
T Consensus 5 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fi 80 (135)
T 2yy9_A 5 SSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFF 80 (135)
T ss_dssp --CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHH
Confidence 3567788999999999999999999999999999999999999999999998875 567999999999999999999
Q ss_pred cCC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhcCChh
Q 024753 157 YGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTK 199 (263)
Q Consensus 157 Yt~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~ 199 (263)
||| ..... +++.+++.+|++|+++.|++.|+++|.+.+...
T Consensus 81 Ytg~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 81 YTGHLALTS--GNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp HHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred hCCCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 987 43433 789999999999999999999999998876543
No 14
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.92 E-value=2e-25 Score=165.56 Aligned_cols=103 Identities=36% Similarity=0.506 Sum_probs=89.5
Q ss_pred HhhCCCcccEEEEecC----eEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhcCC-CCcccc
Q 024753 91 MLTEGIHTDIIINASN----GSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGN-IEHEEF 165 (263)
Q Consensus 91 l~~~~~~~Dv~~~v~~----~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiYt~-~~~~~~ 165 (263)
+++++.+|||+|.++| +.|+|||.||+++|+||++||.++++|+. ..|.++++++++|+.+|+|+||| ...+.
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~- 79 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEA- 79 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT-
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCH-
Confidence 5788999999999988 89999999999999999999999999988 99999999999999999999987 43433
Q ss_pred HHHHHHHHHHHHhhCcHHHHHHHHHHHHhcC
Q 024753 166 LTHRLALLRAADKYDICDLKEACHDSLVEDI 196 (263)
Q Consensus 166 ~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 196 (263)
+++.+++.+|++|+++.|++.|+++|.+++
T Consensus 80 -~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 80 -DTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp -TTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 789999999999999999999999998754
No 15
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.92 E-value=7.9e-26 Score=171.96 Aligned_cols=112 Identities=20% Similarity=0.294 Sum_probs=102.0
Q ss_pred cccCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCC-CCHHHHHHHHH
Q 024753 76 TQKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPD-MSIDACQAFLS 154 (263)
Q Consensus 76 ~~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~-~~~~~f~~lL~ 154 (263)
..+.|...+.+.++++++++.+|||+|.++|++|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|+.+|+
T Consensus 11 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~ 88 (125)
T 3ohu_A 11 ESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQ 88 (125)
T ss_dssp ECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHH
Confidence 4567888999999999999999999999999999999999999999999999998776 67899998 99999999999
Q ss_pred hhcCC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHH
Q 024753 155 YIYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDS 191 (263)
Q Consensus 155 fiYt~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~ 191 (263)
|+||| ...+. +++.+++.+|++|+++.|++.|+++
T Consensus 89 ~iYtg~~~~~~--~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 89 FAYTAKLLLSR--ENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp HHTTSEEEECT--TTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred hHcCCceEECH--HHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 99998 33333 7899999999999999999999765
No 16
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.92 E-value=1.7e-25 Score=171.03 Aligned_cols=114 Identities=22% Similarity=0.332 Sum_probs=96.6
Q ss_pred cccCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeC-CCCHHHHHHHHH
Q 024753 76 TQKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIP-DMSIDACQAFLS 154 (263)
Q Consensus 76 ~~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~-~~~~~~f~~lL~ 154 (263)
..+.+...+.+.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.++ ...+|.++ ++++++|+.+|+
T Consensus 12 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~ 87 (129)
T 3ga1_A 12 EIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILS 87 (129)
T ss_dssp ECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHH
T ss_pred ecCcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHH
Confidence 4466788899999999999999999999999999999999999999999999875 56789996 999999999999
Q ss_pred hhcCC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhc
Q 024753 155 YIYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVED 195 (263)
Q Consensus 155 fiYt~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 195 (263)
|+||| ...+. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 88 ~iYtg~~~i~~--~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 88 FCYTGRLSMNV--GDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHSEEECCT--TTHHHHHHHHHHTTBTTSSCC--------
T ss_pred HHhCCccccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99988 33333 78999999999999999999999998764
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.91 E-value=4.2e-25 Score=166.56 Aligned_cols=109 Identities=20% Similarity=0.265 Sum_probs=98.4
Q ss_pred cCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhc
Q 024753 78 KRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIY 157 (263)
Q Consensus 78 ~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiY 157 (263)
+.|...+.++++++++++.+|||+|.++|++|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|
T Consensus 8 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Y 82 (119)
T 2q81_A 8 PQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLDISNAAGLGQVLEFMY 82 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGGGCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHHHc
Confidence 45678899999999999999999999999999999999999999999999863 4568888999999999999999
Q ss_pred CC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q 024753 158 GN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLV 193 (263)
Q Consensus 158 t~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 193 (263)
|| ..... +++.+++.+|++|+++.|++.|+++|.
T Consensus 83 tg~~~i~~--~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 83 TAKLSLSP--ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 87 33333 789999999999999999999999874
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.91 E-value=1.5e-25 Score=170.30 Aligned_cols=113 Identities=19% Similarity=0.320 Sum_probs=99.0
Q ss_pred ccCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeC-CCCHHHHHHHHHh
Q 024753 77 QKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIP-DMSIDACQAFLSY 155 (263)
Q Consensus 77 ~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~-~~~~~~f~~lL~f 155 (263)
.+.|+..+.++++++++++.+|||+|.++|++|+|||.|||++|+||++||.+++.++ ..|.++ ++++++|+.+|+|
T Consensus 9 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~ 86 (124)
T 2ihc_A 9 SSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQF 86 (124)
T ss_dssp CSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHH
Confidence 3567788999999999999999999999999999999999999999999999987664 678894 8999999999999
Q ss_pred hcCC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q 024753 156 IYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLV 193 (263)
Q Consensus 156 iYt~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 193 (263)
+||| ..... +++.+++.+|++|+++.|++.|+++|.
T Consensus 87 iYtg~~~i~~--~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 87 AYTAKLILSK--ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHSEEEEET--TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred hcCCCcccCH--HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 9988 33333 789999999999999999999998764
No 19
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.90 E-value=4.1e-23 Score=154.97 Aligned_cols=106 Identities=18% Similarity=0.253 Sum_probs=95.2
Q ss_pred cccCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHh
Q 024753 76 TQKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSY 155 (263)
Q Consensus 76 ~~~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~f 155 (263)
..+.++..+.+.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|
T Consensus 10 ~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~ 84 (116)
T 3fkc_A 10 TDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNY 84 (116)
T ss_dssp CCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHh
Confidence 3456788899999999999999999999999999999999999999999999875 56899999999999999999
Q ss_pred hcCCCCccccHHHHHHHHHHHHhhCcHHHHH
Q 024753 156 IYGNIEHEEFLTHRLALLRAADKYDICDLKE 186 (263)
Q Consensus 156 iYt~~~~~~~~~~~~~ll~~A~~~~~~~L~~ 186 (263)
+|||.......+++.+++.+|++|+++.|++
T Consensus 85 ~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 85 IYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred hcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 9998542233589999999999999999874
No 20
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.89 E-value=5.6e-23 Score=154.84 Aligned_cols=104 Identities=19% Similarity=0.187 Sum_probs=88.4
Q ss_pred cCChHHHHHHHHHHhhCCCcccEEEEecCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhc
Q 024753 78 KRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIY 157 (263)
Q Consensus 78 ~~~~~~l~~~l~~l~~~~~~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiY 157 (263)
+.+...+++.+. +.++.+|||+|.++|++|+|||.|||++|+||++ ....|.++++++++|+.+|+|+|
T Consensus 13 ~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiY 81 (119)
T 3m5b_A 13 PYGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVY 81 (119)
T ss_dssp TTTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHT
T ss_pred CcchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHc
Confidence 334456666665 5678999999999999999999999999999985 34679999999999999999999
Q ss_pred CC-CCccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHh
Q 024753 158 GN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVE 194 (263)
Q Consensus 158 t~-~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 194 (263)
|| ..... +++.+++.+|++|+++.|++.|++.+.+
T Consensus 82 tg~~~i~~--~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 82 GESVELQP--GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp TCCEEECG--GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCCcCcCH--HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 98 33333 8899999999999999999999998765
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.48 E-value=1.9e-13 Score=107.67 Aligned_cols=113 Identities=12% Similarity=0.169 Sum_probs=86.2
Q ss_pred EEEEe-cCeEEehhHHHHhhcChhHHhhhcC-CCC-cCCcceEEeCCCCHHHHHHHHHhhcCCC--C-------------
Q 024753 100 IIINA-SNGSTGAHRAVLAARSPVFRSMFSH-DLK-EKELSTIDIPDMSIDACQAFLSYIYGNI--E------------- 161 (263)
Q Consensus 100 v~~~v-~~~~~~aHr~iLaa~S~~F~~~f~~-~~~-e~~~~~i~l~~~~~~~f~~lL~fiYt~~--~------------- 161 (263)
|+++. +|+.|.+||.+ |+.|+||++||.+ ++. |+.+..|.++++++.+++.+++|+|+.. .
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 77776 78899999999 8899999999987 666 6777899999999999999999999542 1
Q ss_pred ----------ccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhcCChhh---HHHHHHHHHhCCC
Q 024753 162 ----------HEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKN---VLERLQNAYLYQL 213 (263)
Q Consensus 162 ----------~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n---~~~~l~~A~~~~~ 213 (263)
...+.+++.+|+.+|++|++..|.+.|++++...+...+ +..++.+...+..
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~ 146 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 146 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCT
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCH
Confidence 122357899999999999999999999999987765444 4444444433433
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.30 E-value=9.5e-12 Score=89.68 Aligned_cols=81 Identities=19% Similarity=0.182 Sum_probs=61.9
Q ss_pred EEEEe-cCeEEehhHHHHhhcChhHHhhhcC--CCCcCCcceEEeCCCCHHHHHHHHHhhc-----C---C-CC-ccccH
Q 024753 100 IIINA-SNGSTGAHRAVLAARSPVFRSMFSH--DLKEKELSTIDIPDMSIDACQAFLSYIY-----G---N-IE-HEEFL 166 (263)
Q Consensus 100 v~~~v-~~~~~~aHr~iLaa~S~~F~~~f~~--~~~e~~~~~i~l~~~~~~~f~~lL~fiY-----t---~-~~-~~~~~ 166 (263)
|+++. +|++|.+||.+ |+.|++|++||.+ ++.|+....|.++++++.+++.+++|+| + + +. ..-+.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 56666 67899999999 9999999999976 6777778899999999999999999999 4 2 22 01234
Q ss_pred HHHHHHHHHHHhhCc
Q 024753 167 THRLALLRAADKYDI 181 (263)
Q Consensus 167 ~~~~~ll~~A~~~~~ 181 (263)
+++.+|+.||++|+.
T Consensus 83 ~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 83 EIALELLMAANFLDC 97 (97)
T ss_dssp GGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhhCC
Confidence 889999999999873
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.11 E-value=4.8e-10 Score=86.24 Aligned_cols=99 Identities=14% Similarity=0.155 Sum_probs=80.3
Q ss_pred EEEEe-cCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhcCC--CC---------------
Q 024753 100 IIINA-SNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGN--IE--------------- 161 (263)
Q Consensus 100 v~~~v-~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiYt~--~~--------------- 161 (263)
|+++. +|+.|.+|+.+ |..|+++++|+.+.- ...|.+++++..+++.+++|+|.. ..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 78 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDD 78 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCCHHHHHHHHHHHHHHTTCC---------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhh
Confidence 67777 77899999998 889999999997531 457999999999999999999942 11
Q ss_pred --------ccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhcCChhhHHH
Q 024753 162 --------HEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLE 203 (263)
Q Consensus 162 --------~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n~~~ 203 (263)
..-+.+++.+|+.||++|++..|.+.|++++...+...++-+
T Consensus 79 i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ee 128 (141)
T 1fs1_B 79 IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEE 128 (141)
T ss_dssp --HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHH
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH
Confidence 122347789999999999999999999999888776555544
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.03 E-value=1.7e-10 Score=90.64 Aligned_cols=107 Identities=16% Similarity=0.204 Sum_probs=59.3
Q ss_pred EEEEe-cCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhcCCCC-----------------
Q 024753 100 IIINA-SNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGNIE----------------- 161 (263)
Q Consensus 100 v~~~v-~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiYt~~~----------------- 161 (263)
|+++. +|+.|.+|+.+ |..|++|++||.+.. ....|.+++++..+++.+++|+|....
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 81 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDD 81 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC-----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccc
Confidence 66776 78899999999 789999999997642 345799999999999999999996321
Q ss_pred ---------ccccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhcC---ChhhHHHHHHHHHh
Q 024753 162 ---------HEEFLTHRLALLRAADKYDICDLKEACHDSLVEDI---DTKNVLERLQNAYL 210 (263)
Q Consensus 162 ---------~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l---~~~n~~~~l~~A~~ 210 (263)
..-+..++.+|+.||++|++..|.+.|++++...+ +++.+..++.++..
T Consensus 82 ~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd 142 (160)
T 2p1m_A 82 DLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKND 142 (160)
T ss_dssp -------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCC
T ss_pred hhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCC
Confidence 01223678899999999999999999999999988 45555555544433
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.57 E-value=2.1e-07 Score=66.92 Aligned_cols=81 Identities=21% Similarity=0.266 Sum_probs=65.8
Q ss_pred cEEEEe-cCeEEehhHHHHhhcChhHHhhhcCCCCcCCcceEEeCCCCHHHHHHHHHhhcCCC-------------Cccc
Q 024753 99 DIIINA-SNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGNI-------------EHEE 164 (263)
Q Consensus 99 Dv~~~v-~~~~~~aHr~iLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~lL~fiYt~~-------------~~~~ 164 (263)
-|+++. +|+.|.+++.+ |..|..++.|+.+++ +.....|.+++++..+++.+++|+|... ...-
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 377777 88899999997 789999999998765 5566789999999999999999998410 0122
Q ss_pred cHHHHHHHHHHHHhhCc
Q 024753 165 FLTHRLALLRAADKYDI 181 (263)
Q Consensus 165 ~~~~~~~ll~~A~~~~~ 181 (263)
+.+++.+|+.||++|++
T Consensus 83 d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 35789999999999875
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.55 E-value=6.2e-07 Score=70.81 Aligned_cols=101 Identities=12% Similarity=0.188 Sum_probs=75.4
Q ss_pred cEEEEe-cCeEEehhHHHHhhcChhHHhhhcCCCC----cCCcceEEeCCCCHHHHHHHHHhhcC--CCC--c-------
Q 024753 99 DIIINA-SNGSTGAHRAVLAARSPVFRSMFSHDLK----EKELSTIDIPDMSIDACQAFLSYIYG--NIE--H------- 162 (263)
Q Consensus 99 Dv~~~v-~~~~~~aHr~iLaa~S~~F~~~f~~~~~----e~~~~~i~l~~~~~~~f~~lL~fiYt--~~~--~------- 162 (263)
-|+++. +|..|.+++.+ |..|..++.|+..... +.....|.+++++..+++.+++|++. +.. .
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 477776 67799999998 6689999999965322 12347899999999999999999973 111 0
Q ss_pred -------------cccHHHHHHHHHHHHhhCcHHHHHHHHHHHHhcCChhh
Q 024753 163 -------------EEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKN 200 (263)
Q Consensus 163 -------------~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n 200 (263)
.-+..++.+|+.||++|++..|.+.|++.+...+...+
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgkt 137 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRS 137 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCC
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCC
Confidence 11236789999999999999999999998866554333
No 27
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.51 E-value=7.7e-07 Score=64.90 Aligned_cols=95 Identities=17% Similarity=0.125 Sum_probs=73.4
Q ss_pred cEEEEecCeEEehhHHHHhhcC-hhHHhhhcCCCC----cCCcceEEeCCCCHHHHHHHHHhhcCCCCccccHHHHHHHH
Q 024753 99 DIIINASNGSTGAHRAVLAARS-PVFRSMFSHDLK----EKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALL 173 (263)
Q Consensus 99 Dv~~~v~~~~~~aHr~iLaa~S-~~F~~~f~~~~~----e~~~~~i~l~~~~~~~f~~lL~fiYt~~~~~~~~~~~~~ll 173 (263)
-|+|.|||+.|...+..|+... .+|.+||.++.. ....+++-+ |-+|..|+.+|+|+.+|....+.......++
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~ 85 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 85 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHHH
Confidence 4789999999999999999765 578899876421 123455666 6799999999999998733222123457899
Q ss_pred HHHHhhCcHHHHHHHHHHHHh
Q 024753 174 RAADKYDICDLKEACHDSLVE 194 (263)
Q Consensus 174 ~~A~~~~~~~L~~~c~~~l~~ 194 (263)
.-|++|+++.|.+.|.+.|.+
T Consensus 86 ~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 86 EEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHhc
Confidence 999999999999999998764
No 28
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.50 E-value=1.9e-07 Score=66.77 Aligned_cols=81 Identities=19% Similarity=0.185 Sum_probs=60.6
Q ss_pred EEEEe-cCeEEehhHHHHhhcChhHHhhhcC--CCCcCCcceEEeCCCCHHHHHHHHHhhcCCC----------CccccH
Q 024753 100 IIINA-SNGSTGAHRAVLAARSPVFRSMFSH--DLKEKELSTIDIPDMSIDACQAFLSYIYGNI----------EHEEFL 166 (263)
Q Consensus 100 v~~~v-~~~~~~aHr~iLaa~S~~F~~~f~~--~~~e~~~~~i~l~~~~~~~f~~lL~fiYt~~----------~~~~~~ 166 (263)
|+++. +|+.|.+++.+ |..|++++.|+.+ .+.|+....|.+++++..+++.+++|+|... ...-+.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 56666 78899999997 7899999999975 2356666789999999999999999998410 011234
Q ss_pred HHHHHHHHHHHhhCc
Q 024753 167 THRLALLRAADKYDI 181 (263)
Q Consensus 167 ~~~~~ll~~A~~~~~ 181 (263)
+++.+|+.||+++++
T Consensus 82 ~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 EIALELLMAANFLDC 96 (96)
T ss_dssp TTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCc
Confidence 689999999999875
No 29
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.19 E-value=1.8e-06 Score=62.60 Aligned_cols=64 Identities=14% Similarity=0.088 Sum_probs=53.9
Q ss_pred HhcCChhhHHHHHHHHHhCCChHHHHHHHHHHH-HHHhhhccccchHHHHhhCcHHHHHH----------HHHHHHhcc
Q 024753 193 VEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV-KFGKIFDIRDDFSVFLQCADRELIAE----------VFHEVLGAW 260 (263)
Q Consensus 193 ~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~-~~~~v~~~~~~~~~fl~~~~~~l~~~----------l~~~~l~~~ 260 (263)
.+.++++||+.++.+|+.|++..|.+.|.+|+. ||.++.+ .++|++++..++... +++.++.|.
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~----~~eFl~L~~~~L~~lL~sdv~~E~~vf~av~~Wv 79 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQN----TEEFLHLPHRLLTDIISDGVPCSQNPTEAIEAWI 79 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHT----SHHHHHSCHHHHHHHHHTCEETTSCHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh----cccHhhCCHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999 9999988 889999886666543 555566553
No 30
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.05 E-value=8.7e-06 Score=59.66 Aligned_cols=82 Identities=18% Similarity=0.156 Sum_probs=60.8
Q ss_pred cEEEEe-cCeEEehhHHHHhhcChhHHhhhcC--CCCcCCcceEEeCCCCHHHHHHHHHhhcCC--C--------Ccccc
Q 024753 99 DIIINA-SNGSTGAHRAVLAARSPVFRSMFSH--DLKEKELSTIDIPDMSIDACQAFLSYIYGN--I--------EHEEF 165 (263)
Q Consensus 99 Dv~~~v-~~~~~~aHr~iLaa~S~~F~~~f~~--~~~e~~~~~i~l~~~~~~~f~~lL~fiYt~--~--------~~~~~ 165 (263)
-|+++. +|..|.+++.+ |..|+.++.|+.. .+.|.....|.+++++..+++.+++|++.. . ...-+
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 477775 77899999995 6799999999974 234555678999999999999999999731 0 01223
Q ss_pred HHHHHHHHHHHHhhCc
Q 024753 166 LTHRLALLRAADKYDI 181 (263)
Q Consensus 166 ~~~~~~ll~~A~~~~~ 181 (263)
..++.+|+.||++|++
T Consensus 97 ~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 97 PEIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 5789999999999875
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.54 E-value=0.00017 Score=58.01 Aligned_cols=96 Identities=17% Similarity=0.123 Sum_probs=72.2
Q ss_pred cEEEEecCeEEehhHHHHhhcC-hhHHhhhcCCCC----cCCcceEEeCCCCHHHHHHHHHhhcCCCCccccHHHHHHHH
Q 024753 99 DIIINASNGSTGAHRAVLAARS-PVFRSMFSHDLK----EKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALL 173 (263)
Q Consensus 99 Dv~~~v~~~~~~aHr~iLaa~S-~~F~~~f~~~~~----e~~~~~i~l~~~~~~~f~~lL~fiYt~~~~~~~~~~~~~ll 173 (263)
=|+|.|||..|...+..|.... .+|.+||.+... ....+.+-| |-+|..|+.+|+|+-+|....+.......++
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l~ 91 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 91 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHHH
Confidence 4788999999999999998654 478888876421 113455655 5699999999999997732222123346799
Q ss_pred HHHHhhCcHHHHHHHHHHHHhc
Q 024753 174 RAADKYDICDLKEACHDSLVED 195 (263)
Q Consensus 174 ~~A~~~~~~~L~~~c~~~l~~~ 195 (263)
.-|++|+++.|.+.|.+.|.+.
T Consensus 92 eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 92 EEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCcHHHHHHHHHHHHHH
Confidence 9999999999999999988653
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.31 E-value=0.0014 Score=48.07 Aligned_cols=96 Identities=11% Similarity=0.069 Sum_probs=66.3
Q ss_pred cEEEEecCeEEehhHHHHhhcC-hhHHhhhcCCC-CcCCcceEEeCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q 024753 99 DIIINASNGSTGAHRAVLAARS-PVFRSMFSHDL-KEKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALLRAA 176 (263)
Q Consensus 99 Dv~~~v~~~~~~aHr~iLaa~S-~~F~~~f~~~~-~e~~~~~i~l~~~~~~~f~~lL~fiYt~~~~~~~~~~~~~ll~~A 176 (263)
=|+|.|||..|...+..|.... ..+.+|+.+.. .....+++-+ |=+|..|+.+|+|+-+|....+.......++.-|
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea 84 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEEL 84 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHHH
Confidence 4889999999999999998653 34566665421 1233456666 4699999999999997732222113467899999
Q ss_pred HhhCcHHHH--HHHHHHHHhc
Q 024753 177 DKYDICDLK--EACHDSLVED 195 (263)
Q Consensus 177 ~~~~~~~L~--~~c~~~l~~~ 195 (263)
++|+++... ..|...+.+.
T Consensus 85 ~fy~i~~~~l~~CC~~~~~~~ 105 (115)
T 3kvt_A 85 EFWGLDSNQVEPCCWMTYTAH 105 (115)
T ss_dssp HHHTCCGGGBCGGGSHHHHSC
T ss_pred HHhCCChHHHHHHHHHHHHhc
Confidence 999998654 3355555544
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=96.24 E-value=0.012 Score=43.47 Aligned_cols=92 Identities=13% Similarity=0.115 Sum_probs=62.4
Q ss_pred ccEEEEecCeEEehhHHHHhhcChhHHhhhcCC----CCcCCcceEEeCCCCHHHHHHHHHhhcCCCCccccHHHHHHHH
Q 024753 98 TDIIINASNGSTGAHRAVLAARSPVFRSMFSHD----LKEKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALL 173 (263)
Q Consensus 98 ~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~----~~e~~~~~i~l~~~~~~~f~~lL~fiYt~~~~~~~~~~~~~ll 173 (263)
.-|+|.|||..|..-+..|..... .+|... ......+++-| |=++..|+.+|+|+-+|.........+..++
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~ 88 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYD 88 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 348899999999999999975422 233221 11223455666 4599999999999998733222123578899
Q ss_pred HHHHhhCcHHHH--HHHHHHHH
Q 024753 174 RAADKYDICDLK--EACHDSLV 193 (263)
Q Consensus 174 ~~A~~~~~~~L~--~~c~~~l~ 193 (263)
.-|++|+++.+. ..|.....
T Consensus 89 ~Ea~fy~i~~l~l~~cC~~~~~ 110 (124)
T 1s1g_A 89 DELAFYGILPEIIGDCCYEEYK 110 (124)
T ss_dssp HHHHHTTCCGGGBCHHHHHHHH
T ss_pred HHHHHcCCChHHHHHHHHHHHH
Confidence 999999999873 44555443
No 34
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=95.87 E-value=0.0073 Score=43.38 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=60.1
Q ss_pred EEEEecCeEEehhHHHHhhcChhHHhhhcCC----CCcCCcceEEeCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHH
Q 024753 100 IIINASNGSTGAHRAVLAARSPVFRSMFSHD----LKEKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALLRA 175 (263)
Q Consensus 100 v~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~----~~e~~~~~i~l~~~~~~~f~~lL~fiYt~~~~~~~~~~~~~ll~~ 175 (263)
|++.|||..|...+..|..... .|+... ......+.+-+ |=+|..|+.+|+|+-+|....+....+..++.-
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~E 77 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYDEE 77 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 7899999999999999976432 233221 11123455666 459999999999998773322211347889999
Q ss_pred HHhhCcHHH--HHHHHHHH
Q 024753 176 ADKYDICDL--KEACHDSL 192 (263)
Q Consensus 176 A~~~~~~~L--~~~c~~~l 192 (263)
|++|+++.+ ...|....
T Consensus 78 a~fy~i~~l~~~~cc~~~~ 96 (105)
T 1nn7_A 78 LAFFGLIPEIIGDCCYEEY 96 (105)
T ss_dssp HHHHTCCSCCBCHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHH
Confidence 999999876 34454443
No 35
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=95.31 E-value=0.016 Score=41.23 Aligned_cols=85 Identities=9% Similarity=0.015 Sum_probs=58.8
Q ss_pred EEEEecCeEEehhHHHHhhcC-hhHHhhhcC-CCCcCCcceEEeCCCCHHHHHHHHHhhcC-CCCccccHHHHHHHHHHH
Q 024753 100 IIINASNGSTGAHRAVLAARS-PVFRSMFSH-DLKEKELSTIDIPDMSIDACQAFLSYIYG-NIEHEEFLTHRLALLRAA 176 (263)
Q Consensus 100 v~~~v~~~~~~aHr~iLaa~S-~~F~~~f~~-~~~e~~~~~i~l~~~~~~~f~~lL~fiYt-~~~~~~~~~~~~~ll~~A 176 (263)
|++.|||..|...+..|+..- ..+.+|+.. .......+++-+ |=+|..|+.+|+|+-+ |....+.......++.-|
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea 81 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEI 81 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHH
Confidence 788999999999999997542 234444432 111224456666 5689999999999997 633222123578899999
Q ss_pred HhhCcHHHH
Q 024753 177 DKYDICDLK 185 (263)
Q Consensus 177 ~~~~~~~L~ 185 (263)
++|+++.+.
T Consensus 82 ~fy~i~~~~ 90 (100)
T 1t1d_A 82 KFYELGENA 90 (100)
T ss_dssp HHTTCCHHH
T ss_pred HHcCCCHHH
Confidence 999998754
No 36
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=95.09 E-value=0.02 Score=43.22 Aligned_cols=94 Identities=13% Similarity=0.129 Sum_probs=63.0
Q ss_pred cccEEEEecCeEEehhHHHHhhcChhHHhhhcCC----CCcCCcceEEeCCCCHHHHHHHHHhhcCCCCccccHHHHHHH
Q 024753 97 HTDIIINASNGSTGAHRAVLAARSPVFRSMFSHD----LKEKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLAL 172 (263)
Q Consensus 97 ~~Dv~~~v~~~~~~aHr~iLaa~S~~F~~~f~~~----~~e~~~~~i~l~~~~~~~f~~lL~fiYt~~~~~~~~~~~~~l 172 (263)
..-|+|.|||..|...+..|.... ..||... ......+++-| |=++..|+.+|+|+-+|.........+..+
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 109 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAY 109 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHHHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHHHH
Confidence 345889999999999999997542 2233221 11123456666 459999999999998773322211357889
Q ss_pred HHHHHhhCcHHH--HHHHHHHHHh
Q 024753 173 LRAADKYDICDL--KEACHDSLVE 194 (263)
Q Consensus 173 l~~A~~~~~~~L--~~~c~~~l~~ 194 (263)
++-|++|+++.+ ...|.....+
T Consensus 110 ~eEa~fy~i~~l~l~~CC~~~~~~ 133 (140)
T 2nz0_B 110 DDELAFYGILPEIIGDCCYEEYKD 133 (140)
T ss_dssp HHHHHHHTCCGGGBCTTTHHHHHH
T ss_pred HHHHHHcCCChHHHHHHHHHHHHH
Confidence 999999999986 3344444443
No 37
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=87.42 E-value=0.76 Score=32.21 Aligned_cols=30 Identities=30% Similarity=0.609 Sum_probs=28.3
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++.+|+..++..|++++.+.|++.|.+|+.
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 106 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLE 106 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 677899999999999999999999999997
No 38
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=82.46 E-value=1.4 Score=31.51 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=27.9
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++.+|+..++..|+.++.+.|++.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 677899999999999999999999999984
No 39
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=81.93 E-value=4 Score=28.75 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=27.7
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++.+|+..++..|+.++.+.|++.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 567899999999999999999999999874
No 40
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=81.01 E-value=5 Score=28.53 Aligned_cols=31 Identities=16% Similarity=0.356 Sum_probs=28.5
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLVK 226 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 226 (263)
++.+|+..++..|+.++.+.|++.|.+|+.+
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999863
No 41
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=80.92 E-value=4.2 Score=29.17 Aligned_cols=30 Identities=13% Similarity=0.453 Sum_probs=28.2
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++.+|+..++..|+.++.+.|++.|.+|+.
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 567899999999999999999999999986
No 42
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=80.07 E-value=2.3 Score=30.23 Aligned_cols=29 Identities=31% Similarity=0.509 Sum_probs=27.1
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYL 224 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i 224 (263)
++.+|+..++..|+.++.+.|++.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 56789999999999999999999999987
No 43
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.81 E-value=1.9 Score=30.25 Aligned_cols=59 Identities=8% Similarity=0.066 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHhhCcHHHHHHHHHHHHhcCC------------hhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 166 LTHRLALLRAADKYDICDLKEACHDSLVEDID------------TKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 166 ~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~------------~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
.+|...++.+|+.|+++.|+..|.+++.++.. .+....++.- +--.-..+.+++++|+.
T Consensus 10 ~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~s-dv~~E~~vf~av~~Wv~ 80 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISD-GVPCSQNPTEAIEAWIN 80 (105)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHT-CEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcC-CCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999987643 2233333332 21233457777777776
No 44
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=78.77 E-value=2.5 Score=30.93 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=28.8
Q ss_pred cCChhhHHHHHHHHHhCCChHHHHHHHHHHH-HHH
Q 024753 195 DIDTKNVLERLQNAYLYQLPKLKSSCMRYLV-KFG 228 (263)
Q Consensus 195 ~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~-~~~ 228 (263)
.++.+|+..++..|+.++...|++.|.+|+. +..
T Consensus 86 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSV 120 (135)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC----
T ss_pred CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcc
Confidence 3678899999999999999999999999997 543
No 45
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=77.46 E-value=3.8 Score=37.49 Aligned_cols=86 Identities=12% Similarity=0.014 Sum_probs=57.4
Q ss_pred cEEEEecCeEEehhHHHHhhcCh-hHHhhhcC-CCCcCCcceEEeCCCCHHHHHHHHHhhcC-CCCccccHHHHHHHHHH
Q 024753 99 DIIINASNGSTGAHRAVLAARSP-VFRSMFSH-DLKEKELSTIDIPDMSIDACQAFLSYIYG-NIEHEEFLTHRLALLRA 175 (263)
Q Consensus 99 Dv~~~v~~~~~~aHr~iLaa~S~-~F~~~f~~-~~~e~~~~~i~l~~~~~~~f~~lL~fiYt-~~~~~~~~~~~~~ll~~ 175 (263)
-|++.|||..|...+..|...-. .+..++.. ..-....++.-+ |=+|..|+.+|+|+.+ |....+.......+.+-
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E 131 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEE 131 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHHHHHH
Confidence 48889999999999999975321 11222211 111233456666 5699999999999997 73322212346678999
Q ss_pred HHhhCcHHHH
Q 024753 176 ADKYDICDLK 185 (263)
Q Consensus 176 A~~~~~~~L~ 185 (263)
|++|+++++.
T Consensus 132 ~~f~~i~~~~ 141 (514)
T 2r9r_B 132 IRFYELGEEA 141 (514)
T ss_dssp HHHTTCCHHH
T ss_pred HHhcCCCHHH
Confidence 9999998754
No 46
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=75.01 E-value=1.8 Score=30.87 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=27.4
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++.+|+..++..|+.++.+.|++.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 667899999999999999999999999886
No 47
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=74.85 E-value=2.4 Score=32.13 Aligned_cols=30 Identities=30% Similarity=0.240 Sum_probs=27.9
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++.+++..++..|+.++.+.|++.|.+++.
T Consensus 100 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 129 (172)
T 3htm_A 100 NLDKMADDLLAAADKYALERLKVMCEDALC 129 (172)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 457899999999999999999999999997
No 48
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=72.81 E-value=2 Score=32.02 Aligned_cols=29 Identities=28% Similarity=0.525 Sum_probs=26.9
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYL 224 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i 224 (263)
++.+|+..++..|+.++.+.|++.|.+|+
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 57789999999999999999999999876
No 49
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=72.41 E-value=2.1 Score=31.49 Aligned_cols=30 Identities=20% Similarity=0.406 Sum_probs=28.4
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++.+|+..++..|+.++...|++.|.+|+.
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 130 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLK 130 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 678899999999999999999999999987
No 50
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=66.17 E-value=4.8 Score=28.80 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=27.6
Q ss_pred cCChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 195 DIDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 195 ~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
.++.+|+..++..|+.++...|++.|.+++.
T Consensus 86 ~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~ 116 (119)
T 3m5b_A 86 ELQPGELRPLQEAARALGVQSLEEACWRARG 116 (119)
T ss_dssp EECGGGHHHHHHHHHHTTCHHHHHHHHHHC-
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 3578999999999999999999999999875
No 51
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=61.47 E-value=17 Score=30.27 Aligned_cols=31 Identities=19% Similarity=0.083 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHhcCC
Q 024753 167 THRLALLRAADKYDICDLKEACHDSLVEDID 197 (263)
Q Consensus 167 ~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~ 197 (263)
+++..++.+|++|+++.|+..|.+++..++.
T Consensus 275 ~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 275 ENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999998754
No 52
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=55.84 E-value=6.3 Score=28.72 Aligned_cols=30 Identities=30% Similarity=0.240 Sum_probs=26.1
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++.+++..++..|+.++.+.|++.|.+++.
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 120 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALC 120 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC--
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 457889999999999999999999999997
No 53
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=54.26 E-value=2.2 Score=30.87 Aligned_cols=31 Identities=6% Similarity=0.139 Sum_probs=23.4
Q ss_pred cCChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 195 DIDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 195 ~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
.++.+|+..++..|+.++...|++.|.+|+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~ 125 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFL 125 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999986
No 54
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=47.92 E-value=14 Score=30.38 Aligned_cols=30 Identities=33% Similarity=0.413 Sum_probs=28.3
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++.+|+..++..|..++...|++.|.+|+.
T Consensus 107 i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~ 136 (279)
T 3i3n_A 107 VSTGSVHEVLELADRFLLIRLKEFCGEFLK 136 (279)
T ss_dssp EETTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 567899999999999999999999999997
No 55
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=46.80 E-value=21 Score=17.52 Aligned_cols=21 Identities=19% Similarity=0.248 Sum_probs=16.3
Q ss_pred HHHHHHHhCCChHHHHHHHHH
Q 024753 203 ERLQNAYLYQLPKLKSSCMRY 223 (263)
Q Consensus 203 ~~l~~A~~~~~~~L~~~~~~~ 223 (263)
.++-.|..|+.++|...|++-
T Consensus 3 kvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhc
Confidence 456678888999998888763
No 56
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=45.72 E-value=17 Score=29.39 Aligned_cols=30 Identities=27% Similarity=0.486 Sum_probs=27.7
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
++.+|+..++..|..++.+.|++.|.+|+.
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~ 128 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLE 128 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 678899999999999999999999999997
No 57
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=42.74 E-value=1.3 Score=31.95 Aligned_cols=29 Identities=21% Similarity=0.447 Sum_probs=26.4
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYL 224 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i 224 (263)
++.+|+..++..|+.++.+.|++.|.+|+
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 56789999999999999999999998876
No 58
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=40.97 E-value=32 Score=25.78 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=31.8
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHhCCChHHHHHHHHHHH
Q 024753 187 ACHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV 225 (263)
Q Consensus 187 ~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 225 (263)
.-.+++ .++.+++..++..|...+...|.+.|.++++
T Consensus 87 wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va 123 (159)
T 2ast_A 87 WDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVA 123 (159)
T ss_dssp HHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 334444 4789999999999999999999999999997
No 59
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=27.44 E-value=1.8e+02 Score=21.07 Aligned_cols=79 Identities=9% Similarity=0.024 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhcCC-CCc-cccHHHHHHHHHHHHhhCc---------------HHHHHHHHHHHHhcCChhhHHHHHHHH
Q 024753 146 IDACQAFLSYIYGN-IEH-EEFLTHRLALLRAADKYDI---------------CDLKEACHDSLVEDIDTKNVLERLQNA 208 (263)
Q Consensus 146 ~~~f~~lL~fiYt~-~~~-~~~~~~~~~ll~~A~~~~~---------------~~L~~~c~~~l~~~l~~~n~~~~l~~A 208 (263)
...++.++.-.-.+ +.. .-....+..+++-+.+..- ..+...-.+++ .++.+++.+++..|
T Consensus 24 S~~ik~ml~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~vd~~~l~eLi~AA 101 (141)
T 1fs1_B 24 SVTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAA 101 (141)
T ss_dssp CHHHHHHHHHTCCSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHT--CSCHHHHHHHHHHH
T ss_pred hHHHHHHHHhcCCCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHH--hCCHHHHHHHHHHH
Confidence 34566666543111 221 1223455556666655541 12333333444 37899999999999
Q ss_pred HhCCChHHHHHHHHHHHH
Q 024753 209 YLYQLPKLKSSCMRYLVK 226 (263)
Q Consensus 209 ~~~~~~~L~~~~~~~i~~ 226 (263)
...+...|.+.|.+++++
T Consensus 102 nyL~I~~Lldl~c~~vA~ 119 (141)
T 1fs1_B 102 NYLDIKGLLDVTCKTVAN 119 (141)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHH
Confidence 999999999999999973
No 60
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=25.67 E-value=47 Score=17.35 Aligned_cols=21 Identities=19% Similarity=0.248 Sum_probs=15.3
Q ss_pred HHHHHHHhCCChHHHHHHHHH
Q 024753 203 ERLQNAYLYQLPKLKSSCMRY 223 (263)
Q Consensus 203 ~~l~~A~~~~~~~L~~~~~~~ 223 (263)
.++-.|..|+.++|...|++-
T Consensus 8 kvmcyaqrhsspellrrcldn 28 (34)
T 2cmy_B 8 KVMCYAQRHSSPELLRRCLDN 28 (34)
T ss_dssp HHHHHHBC--CCHHHHHHHHH
T ss_pred hHHHHHhhcCCHHHHHHHHHh
Confidence 566788899999999999764
No 61
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=24.68 E-value=47 Score=24.90 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=21.8
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHHHH
Q 024753 196 IDTKNVLERLQNAYLYQLPKLKSSCMRYLVK 226 (263)
Q Consensus 196 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 226 (263)
++.+++.+++..|...+...|.+.|.+++++
T Consensus 93 vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~ 123 (160)
T 2p1m_A 93 IDQATLFELILAANYLNIKNLLDLTCQTVAD 123 (160)
T ss_dssp --------CHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999973
Done!