Query 024756
Match_columns 263
No_of_seqs 117 out of 1221
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 07:10:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024756.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024756hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 8E-28 1.7E-32 219.5 23.8 248 6-259 8-266 (358)
2 PRK11272 putative DMT superfam 99.9 1.2E-22 2.6E-27 181.0 21.7 216 8-260 5-223 (292)
3 PRK11453 O-acetylserine/cystei 99.9 6.6E-22 1.4E-26 176.8 20.2 213 13-260 6-225 (299)
4 TIGR00950 2A78 Carboxylate/Ami 99.9 2.3E-21 5E-26 169.1 19.1 199 23-260 1-202 (260)
5 PRK11689 aromatic amino acid e 99.9 3.6E-21 7.7E-26 171.8 17.8 217 9-257 2-223 (295)
6 PRK15430 putative chlorampheni 99.9 9.4E-21 2E-25 169.1 19.0 186 5-226 2-193 (296)
7 TIGR00688 rarD rarD protein. T 99.9 1.8E-20 3.8E-25 163.8 19.7 163 11-208 2-171 (256)
8 PRK10532 threonine and homoser 99.8 1.6E-19 3.5E-24 161.0 19.7 209 9-260 10-219 (293)
9 TIGR00817 tpt Tpt phosphate/ph 99.8 3.9E-18 8.5E-23 152.5 21.0 181 26-236 17-199 (302)
10 PTZ00343 triose or hexose phos 99.7 3.4E-16 7.3E-21 143.0 21.2 198 9-236 47-253 (350)
11 TIGR03340 phn_DUF6 phosphonate 99.7 9.2E-17 2E-21 142.3 16.9 166 13-209 3-170 (281)
12 PF06027 DUF914: Eukaryotic pr 99.7 5.3E-15 1.1E-19 133.3 20.2 195 22-237 24-221 (334)
13 COG0697 RhaT Permeases of the 99.7 8.4E-15 1.8E-19 128.5 20.0 186 7-221 3-191 (292)
14 PF00892 EamA: EamA-like trans 99.6 1.5E-15 3.2E-20 117.1 8.2 123 21-151 1-125 (126)
15 COG2962 RarD Predicted permeas 99.6 3E-13 6.4E-18 117.6 19.3 213 9-259 5-221 (293)
16 COG2510 Predicted membrane pro 99.6 3.2E-14 6.9E-19 109.1 11.3 133 12-151 4-138 (140)
17 KOG4510 Permease of the drug/m 99.5 1.2E-15 2.7E-20 130.4 0.3 201 11-232 38-239 (346)
18 TIGR00776 RhaT RhaT L-rhamnose 99.4 4.4E-12 9.5E-17 113.1 15.8 180 12-221 2-187 (290)
19 TIGR00950 2A78 Carboxylate/Ami 99.4 3.7E-12 8.1E-17 110.9 13.0 131 8-147 125-259 (260)
20 COG5006 rhtA Threonine/homoser 99.3 1.1E-10 2.4E-15 99.6 18.0 186 12-234 13-198 (292)
21 PF13536 EmrE: Multidrug resis 99.2 1.4E-11 3.1E-16 94.6 6.1 101 45-152 2-106 (113)
22 PRK10532 threonine and homoser 99.2 3E-10 6.4E-15 101.4 13.5 133 10-152 147-281 (293)
23 PRK11272 putative DMT superfam 99.2 2.8E-10 6.1E-15 101.4 13.2 135 10-152 149-285 (292)
24 KOG2765 Predicted membrane pro 99.2 8.2E-11 1.8E-15 105.3 8.7 134 80-234 165-301 (416)
25 PLN00411 nodulin MtN21 family 99.2 1.1E-09 2.3E-14 100.5 15.0 133 12-152 190-328 (358)
26 PRK11689 aromatic amino acid e 99.1 9E-10 1.9E-14 98.3 12.3 132 10-152 155-287 (295)
27 TIGR03340 phn_DUF6 phosphonate 99.1 2.1E-09 4.4E-14 95.3 12.3 132 10-149 143-280 (281)
28 PRK11453 O-acetylserine/cystei 99.0 1.5E-08 3.2E-13 90.6 13.9 136 10-151 142-286 (299)
29 PF08449 UAA: UAA transporter 99.0 7.5E-08 1.6E-12 86.3 18.2 172 40-233 32-205 (303)
30 TIGR00817 tpt Tpt phosphate/ph 98.9 1E-08 2.2E-13 91.7 9.2 138 9-152 143-293 (302)
31 KOG2766 Predicted membrane pro 98.8 2E-10 4.4E-15 98.1 -3.0 190 16-233 24-215 (336)
32 PF04142 Nuc_sug_transp: Nucle 98.8 2.6E-07 5.6E-12 80.4 14.4 153 70-234 13-166 (244)
33 PRK15430 putative chlorampheni 98.7 1.3E-07 2.9E-12 84.4 12.3 133 14-152 152-285 (296)
34 PF03151 TPT: Triose-phosphate 98.7 2.4E-07 5.2E-12 74.2 12.0 132 12-149 1-150 (153)
35 TIGR00776 RhaT RhaT L-rhamnose 98.7 2.4E-07 5.3E-12 82.6 12.1 128 10-151 151-287 (290)
36 PTZ00343 triose or hexose phos 98.7 4.7E-07 1E-11 82.9 13.8 137 9-151 192-347 (350)
37 COG0697 RhaT Permeases of the 98.7 5.4E-07 1.2E-11 78.8 13.7 132 10-151 153-286 (292)
38 PRK15051 4-amino-4-deoxy-L-ara 98.5 7.7E-07 1.7E-11 68.1 8.7 67 79-151 41-108 (111)
39 KOG2234 Predicted UDP-galactos 98.3 0.00048 1E-08 62.1 23.6 205 12-234 16-235 (345)
40 KOG1441 Glucose-6-phosphate/ph 98.3 3.6E-06 7.7E-11 75.6 8.6 181 27-237 33-221 (316)
41 KOG1443 Predicted integral mem 98.2 7.9E-05 1.7E-09 65.8 15.6 201 7-237 11-222 (349)
42 PRK02971 4-amino-4-deoxy-L-ara 98.1 2.4E-05 5.2E-10 61.5 9.3 116 12-151 3-121 (129)
43 PF06027 DUF914: Eukaryotic pr 98.0 9.5E-05 2.1E-09 67.1 12.8 138 8-152 165-305 (334)
44 COG5006 rhtA Threonine/homoser 98.0 4.6E-05 9.9E-10 65.6 9.7 136 6-150 143-280 (292)
45 KOG1444 Nucleotide-sugar trans 98.0 0.00045 9.7E-09 61.4 15.7 182 26-236 27-211 (314)
46 KOG3912 Predicted integral mem 97.9 0.00018 4E-09 62.8 12.0 187 23-231 15-225 (372)
47 KOG4314 Predicted carbohydrate 97.9 2.4E-05 5.1E-10 65.1 5.8 101 82-209 61-161 (290)
48 PF08449 UAA: UAA transporter 97.8 0.00048 1.1E-08 61.7 12.7 135 12-152 155-297 (303)
49 PF06800 Sugar_transport: Suga 97.7 0.0046 1E-07 54.4 17.3 142 71-232 42-184 (269)
50 TIGR00688 rarD rarD protein. T 97.5 0.0013 2.8E-08 57.3 10.9 104 15-121 150-255 (256)
51 PF06800 Sugar_transport: Suga 97.4 0.0014 3.1E-08 57.5 10.4 133 7-148 134-267 (269)
52 PRK13499 rhamnose-proton sympo 97.4 0.0092 2E-07 54.4 15.6 175 10-199 6-190 (345)
53 PF10639 UPF0546: Uncharacteri 97.1 0.0013 2.9E-08 50.2 6.0 108 17-149 2-111 (113)
54 PRK13499 rhamnose-proton sympo 97.1 0.02 4.3E-07 52.3 14.4 143 9-152 172-341 (345)
55 COG2962 RarD Predicted permeas 97.0 0.016 3.4E-07 51.2 12.0 126 18-152 155-283 (293)
56 PRK10650 multidrug efflux syst 97.0 0.0065 1.4E-07 46.2 8.4 60 85-150 46-106 (109)
57 PF04657 DUF606: Protein of un 96.9 0.0078 1.7E-07 47.8 8.8 128 14-149 4-138 (138)
58 PRK09541 emrE multidrug efflux 96.9 0.0026 5.7E-08 48.5 5.6 66 81-152 36-103 (110)
59 KOG4510 Permease of the drug/m 96.9 0.00039 8.5E-09 60.5 1.1 133 12-152 192-325 (346)
60 PRK10452 multidrug efflux syst 96.8 0.0025 5.3E-08 49.4 5.2 66 81-152 36-103 (120)
61 KOG1441 Glucose-6-phosphate/ph 96.8 0.0042 9.1E-08 56.0 7.2 137 8-151 160-306 (316)
62 KOG2765 Predicted membrane pro 96.7 0.014 3E-07 53.2 9.5 136 10-152 246-390 (416)
63 COG2076 EmrE Membrane transpor 96.6 0.0031 6.8E-08 47.5 4.4 62 85-152 41-103 (106)
64 PRK11431 multidrug efflux syst 96.6 0.0052 1.1E-07 46.5 5.4 64 82-151 36-101 (105)
65 PF00893 Multi_Drug_Res: Small 96.5 0.0041 8.8E-08 45.9 4.0 56 81-142 35-92 (93)
66 KOG1442 GDP-fucose transporter 96.2 0.068 1.5E-06 47.0 10.5 121 90-236 118-239 (347)
67 KOG1580 UDP-galactose transpor 96.1 0.02 4.3E-07 49.2 6.8 73 73-151 240-312 (337)
68 KOG1580 UDP-galactose transpor 95.7 0.079 1.7E-06 45.6 8.8 134 81-236 92-226 (337)
69 PF05653 Mg_trans_NIPA: Magnes 95.5 0.043 9.4E-07 49.3 7.0 116 10-152 6-122 (300)
70 COG4975 GlcU Putative glucose 95.2 0.0074 1.6E-07 52.0 1.0 171 12-205 3-174 (288)
71 PF07857 DUF1632: CEO family ( 94.9 0.2 4.2E-06 43.9 9.0 188 12-209 1-209 (254)
72 KOG1581 UDP-galactose transpor 94.9 0.73 1.6E-05 41.2 12.4 169 39-231 50-221 (327)
73 TIGR00803 nst UDP-galactose tr 94.9 0.048 1E-06 46.4 5.1 61 82-148 160-220 (222)
74 KOG1581 UDP-galactose transpor 94.1 0.36 7.8E-06 43.0 8.7 136 10-151 171-312 (327)
75 PF00892 EamA: EamA-like trans 94.1 0.083 1.8E-06 39.7 4.2 62 193-259 1-63 (126)
76 COG3238 Uncharacterized protei 93.9 0.55 1.2E-05 37.7 8.8 135 10-150 4-144 (150)
77 KOG1443 Predicted integral mem 93.1 2.1 4.5E-05 38.5 11.7 135 10-150 163-313 (349)
78 KOG2922 Uncharacterized conser 92.7 0.032 6.9E-07 49.9 -0.0 119 10-156 20-139 (335)
79 KOG1444 Nucleotide-sugar trans 92.6 1.3 2.9E-05 39.7 10.0 135 11-151 157-299 (314)
80 COG5070 VRG4 Nucleotide-sugar 91.7 1.4 3.1E-05 37.8 8.6 125 91-237 85-210 (309)
81 PF03151 TPT: Triose-phosphate 91.1 0.99 2.1E-05 35.5 7.0 54 184-237 1-60 (153)
82 KOG1583 UDP-N-acetylglucosamin 88.0 3.5 7.6E-05 36.5 8.3 169 41-223 34-205 (330)
83 COG4975 GlcU Putative glucose 86.3 0.81 1.8E-05 39.8 3.4 134 10-151 151-284 (288)
84 KOG4831 Unnamed protein [Funct 86.1 13 0.00027 28.1 9.9 115 14-150 6-123 (125)
85 PF06379 RhaT: L-rhamnose-prot 85.7 24 0.00053 32.2 12.7 179 10-203 6-193 (344)
86 KOG3912 Predicted integral mem 85.7 3.5 7.6E-05 36.7 7.1 135 10-150 175-332 (372)
87 KOG1582 UDP-galactose transpor 84.6 2.5 5.5E-05 37.4 5.7 136 10-151 189-331 (367)
88 COG5070 VRG4 Nucleotide-sugar 84.6 3.3 7.1E-05 35.6 6.2 133 12-151 156-295 (309)
89 COG2510 Predicted membrane pro 81.5 6.9 0.00015 30.7 6.4 51 185-236 5-55 (140)
90 PF04142 Nuc_sug_transp: Nucle 80.3 16 0.00034 31.7 9.2 126 10-141 113-242 (244)
91 PF04657 DUF606: Protein of un 78.0 15 0.00033 28.9 7.7 52 185-236 3-54 (138)
92 KOG1442 GDP-fucose transporter 74.6 8.9 0.00019 34.1 5.8 137 10-152 184-327 (347)
93 COG3238 Uncharacterized protei 66.2 46 0.001 26.7 7.9 54 183-236 5-58 (150)
94 KOG1582 UDP-galactose transpor 65.5 15 0.00032 32.7 5.2 102 115-241 147-249 (367)
95 TIGR00803 nst UDP-galactose tr 61.6 61 0.0013 27.1 8.5 93 106-209 10-111 (222)
96 COG4657 RnfA Predicted NADH:ub 56.4 52 0.0011 26.9 6.5 73 136-231 101-185 (193)
97 PF09656 PGPGW: Putative trans 52.4 57 0.0012 21.4 5.1 45 136-208 5-49 (53)
98 PF05653 Mg_trans_NIPA: Magnes 49.8 43 0.00093 30.0 5.8 68 85-152 224-292 (300)
99 KOG1583 UDP-N-acetylglucosamin 46.6 1.6E+02 0.0034 26.5 8.4 131 11-151 164-313 (330)
100 PF04342 DUF486: Protein of un 45.9 59 0.0013 24.5 5.0 30 115-150 77-106 (108)
101 PF11139 DUF2910: Protein of u 45.5 1.8E+02 0.0039 24.3 10.2 113 39-151 64-210 (214)
102 KOG2766 Predicted membrane pro 44.2 43 0.00093 29.6 4.6 130 11-151 166-298 (336)
103 PF07698 7TM-7TMR_HD: 7TM rece 40.6 2E+02 0.0043 23.4 16.2 26 102-127 59-85 (194)
104 PF06570 DUF1129: Protein of u 40.5 92 0.002 26.1 6.1 19 12-30 112-130 (206)
105 PF10754 DUF2569: Protein of u 39.3 1.4E+02 0.0031 23.6 6.7 30 180-209 118-147 (149)
106 PRK02237 hypothetical protein; 38.7 40 0.00086 25.5 3.1 35 112-152 71-105 (109)
107 PF02694 UPF0060: Uncharacteri 37.6 35 0.00075 25.8 2.7 35 112-152 69-103 (107)
108 COG3169 Uncharacterized protei 36.9 1.8E+02 0.0039 21.7 7.7 31 115-151 84-114 (116)
109 PF06570 DUF1129: Protein of u 35.6 2.6E+02 0.0057 23.3 10.8 31 89-122 161-191 (206)
110 PF07168 Ureide_permease: Urei 35.4 40 0.00087 30.4 3.2 128 16-149 1-143 (336)
111 COG3086 RseC Positive regulato 32.2 31 0.00068 27.5 1.8 35 94-129 68-102 (150)
112 PF02673 BacA: Bacitracin resi 27.2 3.9E+02 0.0084 23.4 8.0 89 9-101 78-168 (259)
113 PF00689 Cation_ATPase_C: Cati 26.9 2.3E+02 0.005 22.6 6.2 59 38-96 4-74 (182)
114 COG4858 Uncharacterized membra 22.4 2.9E+02 0.0063 23.2 5.8 53 10-63 162-215 (226)
115 PF12292 DUF3624: Protein of u 21.9 1.9E+02 0.0041 20.5 4.0 40 186-226 24-63 (77)
116 PF05297 Herpes_LMP1: Herpesvi 21.2 32 0.00069 30.7 0.0 19 219-237 144-162 (381)
117 PF07857 DUF1632: CEO family ( 20.9 3.3E+02 0.0072 23.8 6.3 55 8-62 180-246 (254)
118 smart00665 B561 Cytochrome b-5 20.3 3.9E+02 0.0084 20.2 8.5 57 130-200 35-91 (129)
119 PRK10862 SoxR reducing system 20.0 59 0.0013 26.1 1.3 24 98-121 72-95 (154)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.96 E-value=8e-28 Score=219.48 Aligned_cols=248 Identities=32% Similarity=0.570 Sum_probs=191.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcC-CCCCCHHHHHHHHHHHHH
Q 024756 6 WLQNTIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNK-GASLTWSLIWRFFLLGLI 83 (263)
Q Consensus 6 ~~~~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~-~~~~~~~~~~~~~l~g~l 83 (263)
|+++.+++..|++.+++++...++.|.+++.+++|..+.++|+.++++++++ .+.++|++ .++.+++++..+.+.|++
T Consensus 8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~ 87 (358)
T PLN00411 8 WRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL 87 (358)
T ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999999999999999999999998 66544422 344467888888899998
Q ss_pred HHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHH------hhccccccccCccccchhHHHHHHHHHHHHhhcCcc
Q 024756 84 GSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIF------RIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPL 157 (263)
Q Consensus 84 ~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~------~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~ 157 (263)
+...+.+++.|++|+++++++++.+++|+++.++++++ ++||++++ +++|++++++|+.++..++++.
T Consensus 88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~ 161 (358)
T PLN00411 88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPR 161 (358)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCcc
Confidence 86677899999999999999999999999999999998 47777777 9999999999999887644432
Q ss_pred ccccCCC--CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHhc
Q 024756 158 LLMASST--SDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIVE 235 (263)
Q Consensus 158 ~~~~~s~--~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 235 (263)
....+++ .|...+.++....+.+...|+++.++|+++||+|++++|+..+++|+....++|++.++++.+.+.+...+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~ 241 (358)
T PLN00411 162 VFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVE 241 (358)
T ss_pred cccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHc
Confidence 1100000 00000000011122345679999999999999999999999999976667788999999998888877665
Q ss_pred CC-cccceeccCchhhhhhhHhhcc
Q 024756 236 ND-IDAWKLTTGVEIMAIVCTVRTH 259 (263)
Q Consensus 236 ~~-~~~~~~~~~~~~~~l~y~g~~~ 259 (263)
++ ...|....+...+.++|.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~i~y~~i~t 266 (358)
T PLN00411 242 KNNPSVWIIHFDITLITIVTMAIIT 266 (358)
T ss_pred cCCcccceeccchHHHHHHHHHHHH
Confidence 43 3344433344466788888753
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.91 E-value=1.2e-22 Score=180.97 Aligned_cols=216 Identities=13% Similarity=0.080 Sum_probs=170.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHH-H
Q 024756 8 QNTIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIG-S 85 (263)
Q Consensus 8 ~~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~-~ 85 (263)
+..--.+.++...++||++++++|...+ ++||.+++++|+.++++++++ ...+ |+ + ..+++++.+....|.++ .
T Consensus 5 ~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~-~~-~-~~~~~~~~~~~~~g~~~~~ 80 (292)
T PRK11272 5 QLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLR-GH-P-LPTLRQWLNAALIGLLLLA 80 (292)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHh-CC-C-CCcHHHHHHHHHHHHHHHH
Confidence 3344456788999999999999999888 899999999999999999888 5433 22 2 23567888888889887 7
Q ss_pred HHHHHHHhhc-cccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCC
Q 024756 86 SGQIIYFTGL-KFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASST 164 (263)
Q Consensus 86 ~~~~~~~~gl-~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~ 164 (263)
.++.+++.+. ++++++.++++.++.|+++.+++.+ +|||++++ +++|++++++|+.++.. +..
T Consensus 81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~--~~~------- 144 (292)
T PRK11272 81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS--GGN------- 144 (292)
T ss_pred HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc--Ccc-------
Confidence 7888999999 9999999999999999999999975 79999999 99999999999988753 110
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHhcCCcccceec
Q 024756 165 SDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIVENDIDAWKLT 244 (263)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 244 (263)
.+ +...|+++.++++++||.|.+..||..++. +...+.+++.++++.+.+.....+++... ..
T Consensus 145 ------------~~-~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 207 (292)
T PRK11272 145 ------------LS-GNPWGAILILIASASWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLLIASLLSGERLTA--LP 207 (292)
T ss_pred ------------cc-cchHHHHHHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHcCCcccc--cC
Confidence 01 123699999999999999999999975443 45667889999998888877654433211 11
Q ss_pred cCchhhhhhhHhhccc
Q 024756 245 TGVEIMAIVCTVRTHQ 260 (263)
Q Consensus 245 ~~~~~~~l~y~g~~~~ 260 (263)
+...|..++|+|++++
T Consensus 208 ~~~~~~~i~~l~i~~s 223 (292)
T PRK11272 208 TLSGFLALGYLAVFGS 223 (292)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 1245788888888764
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.89 E-value=6.6e-22 Score=176.80 Aligned_cols=213 Identities=16% Similarity=0.139 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHH
Q 024756 13 FVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIG-SSGQIIY 91 (263)
Q Consensus 13 ~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~~~~~ 91 (263)
.+..+++.++||.+++++|...+ ++||.++.++|+.++++.+++.. +++ +.+++ .....|++. ...+.++
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~-~~~----~~~~~---~~~~~g~~~~~~~~~~~ 76 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFV-ARP----KVPLN---LLLGYGLTISFGQFAFL 76 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHh-cCC----CCchH---HHHHHHHHHHHHHHHHH
Confidence 35678999999999999999998 79999999999999887766622 121 11222 233446655 5566778
Q ss_pred Hhhccc-cCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCC
Q 024756 92 FTGLKF-SSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDH 170 (263)
Q Consensus 92 ~~gl~~-~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~ 170 (263)
+.++++ .+++.++++.++.|+++.+++++++|||++++ +++|++++++|+.++.. +..
T Consensus 77 ~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~--~~~------------- 135 (299)
T PRK11453 77 FCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE--DSL------------- 135 (299)
T ss_pred HHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc--ccC-------------
Confidence 899998 48899999999999999999999999999999 99999999999988863 210
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCc--hHHHHHHHHHHHHHHHHHHHHHhcCCc---ccceecc
Q 024756 171 PKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPE--EMTVVFFYTFFITIQALCFSVIVENDI---DAWKLTT 245 (263)
Q Consensus 171 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~--~~~~~~~~~~~~~i~~l~~~~~~~~~~---~~~~~~~ 245 (263)
.. ......|+++.++++++|+.|++++|+..++.++ ....+.+++..+.+.....+...+++. ..+....
T Consensus 136 ----~~-~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (299)
T PRK11453 136 ----NG-QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTID 210 (299)
T ss_pred ----CC-cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCC
Confidence 00 1112369999999999999999999998665532 234456666666665555554444321 1121112
Q ss_pred CchhhhhhhHhhccc
Q 024756 246 GVEIMAIVCTVRTHQ 260 (263)
Q Consensus 246 ~~~~~~l~y~g~~~~ 260 (263)
...|..++|+|++++
T Consensus 211 ~~~~~~l~~l~i~~t 225 (299)
T PRK11453 211 MTTILSLMYLAFVAT 225 (299)
T ss_pred HHHHHHHHHHHHHHH
Confidence 245889999998875
No 4
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.88 E-value=2.3e-21 Score=169.07 Aligned_cols=199 Identities=19% Similarity=0.151 Sum_probs=159.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHHHhhccccCc
Q 024756 23 DVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIG-SSGQIIYFTGLKFSSP 100 (263)
Q Consensus 23 wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~~~~~~~gl~~~~a 100 (263)
||.+++.+|...+++.|+....+.|+..+.+++.+ ... + .+++++.+....|.++ .+++.+++.|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 89999999999876789999999999999888877 432 2 2355667777788887 9999999999999999
Q ss_pred ceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcccccccch
Q 024756 101 TLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSE 180 (263)
Q Consensus 101 ~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 180 (263)
++++++.++.|+++.+++.+++|||++++ +++|++++++|+.++.. ++ . +.+
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~-~--------------------~~~ 125 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG-N--------------------LSI 125 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-c--------------------ccc
Confidence 99999999999999999999999999999 99999999999988763 11 0 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHHhcCCcccceeccCchhhhhhhHhhcc
Q 024756 181 WLIGGLLLVLVCISSAIWNVAQAATIRGYP-EEMTVVFFYTFFITIQALCFSVIVENDIDAWKLTTGVEIMAIVCTVRTH 259 (263)
Q Consensus 181 ~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~y~g~~~ 259 (263)
...|+.+.++++++|+.+.+..|+..++.+ ++...+.+++.++.+.+.+.....+++. .+ ....|..++|.|+++
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIG 201 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHH
Confidence 346999999999999999999999887763 1345555788899888888876544332 11 123466777777665
Q ss_pred c
Q 024756 260 Q 260 (263)
Q Consensus 260 ~ 260 (263)
+
T Consensus 202 ~ 202 (260)
T TIGR00950 202 T 202 (260)
T ss_pred H
Confidence 3
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.87 E-value=3.6e-21 Score=171.78 Aligned_cols=217 Identities=13% Similarity=0.059 Sum_probs=149.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHH
Q 024756 9 NTIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIG-SSG 87 (263)
Q Consensus 9 ~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~ 87 (263)
+.++++.++++.++||.+++..|.+.+ ++||..+.++|+.++.+++++.. +++ +.+ ++++ +..+.+.++ ..+
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~-~~~-~~~---~~~~-~~~~~~~l~~~~~ 74 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTV-GFP-RLR---QFPK-RYLLAGGLLFVSY 74 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHc-ccc-ccc---cccH-HHHHHHhHHHHHH
Confidence 456788899999999999999999998 89999999999999999887721 111 111 1112 223344445 777
Q ss_pred HHHHHhhccc----cCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCC
Q 024756 88 QIIYFTGLKF----SSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASS 163 (263)
Q Consensus 88 ~~~~~~gl~~----~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s 163 (263)
+.+++.++++ +++++++++.++.|+++.+++++++|||++++ +++|++++++|++++... +...+..
T Consensus 75 ~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~-~~~~~~~-- 145 (295)
T PRK11689 75 EICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGG-DNGLSLA-- 145 (295)
T ss_pred HHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecC-Cccchhh--
Confidence 7778887754 57788889999999999999999999999999 999999999999888631 1100000
Q ss_pred CCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHhcCCccccee
Q 024756 164 TSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIVENDIDAWKL 243 (263)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 243 (263)
+ ...+..+...|+++.++|++|||.|+++.||..++. ++.+.. ...+++.+.+.....+++...++
T Consensus 146 --~-------~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~- 211 (295)
T PRK11689 146 --E-------LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLF---FILTALALWIKYFLSPQPAMVFS- 211 (295)
T ss_pred --h-------hhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHH---HHHHHHHHHHHHHHhcCccccCC-
Confidence 0 000001224699999999999999999999988777 465432 23333443333333222211111
Q ss_pred ccCchhhhhhhHhh
Q 024756 244 TTGVEIMAIVCTVR 257 (263)
Q Consensus 244 ~~~~~~~~l~y~g~ 257 (263)
...|..++|.|+
T Consensus 212 --~~~~~~l~~~~~ 223 (295)
T PRK11689 212 --LPAIIKLLLAAA 223 (295)
T ss_pred --HHHHHHHHHHHH
Confidence 134667777774
No 6
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.87 E-value=9.4e-21 Score=169.13 Aligned_cols=186 Identities=9% Similarity=-0.017 Sum_probs=143.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCC--CC-CCHHHHHHHHHH
Q 024756 5 SWLQNTIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKG--AS-LTWSLIWRFFLL 80 (263)
Q Consensus 5 ~~~~~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~--~~-~~~~~~~~~~l~ 80 (263)
|++++.+++++++++.++||.+++++|.. + ++||.++.++|+.++.+++++ ...+++++. ++ .+++++... ..
T Consensus 2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 78 (296)
T PRK15430 2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFML-AV 78 (296)
T ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHH-HH
Confidence 56788899999999999999999999985 5 799999999999999988877 544321110 01 134444333 35
Q ss_pred HHHH-HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCcccc
Q 024756 81 GLIG-SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLL 159 (263)
Q Consensus 81 g~l~-~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~ 159 (263)
+.++ +.++.++++|++++++++++++.++.|+++.+++++++|||++++ +++|++++++|++++... .
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~-~---- 147 (296)
T PRK15430 79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWT-F---- 147 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHH-c----
Confidence 5555 889999999999999999999999999999999999999999999 999999999999988631 0
Q ss_pred ccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-CchHHHHHHHHHHHHHH
Q 024756 160 MASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGY-PEEMTVVFFYTFFITIQ 226 (263)
Q Consensus 160 ~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~i~ 226 (263)
++ . ..+.++++++||.|++..|+..++. .+....+.+++.++.+.
T Consensus 148 -----------------~~-~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~ 193 (296)
T PRK15430 148 -----------------GS-L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIY 193 (296)
T ss_pred -----------------CC-c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Confidence 01 1 1467889999999999999864322 12344455555555544
No 7
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.87 E-value=1.8e-20 Score=163.79 Aligned_cols=163 Identities=13% Similarity=0.045 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcC-----CCCCCHHH-HHHHHHHHHH
Q 024756 11 IPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNK-----GASLTWSL-IWRFFLLGLI 83 (263)
Q Consensus 11 ~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~-----~~~~~~~~-~~~~~l~g~l 83 (263)
|++.+++++.++||.+++++|. .+ ++||.+++++|++++.+++++ ...+++++ .++.++++ +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5788999999999999999998 45 699999999999999988877 54432211 11122222 4446667777
Q ss_pred HHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCC
Q 024756 84 GSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASS 163 (263)
Q Consensus 84 ~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s 163 (263)
.+.++.+++++++++++++++++.++.|+++.+++++++|||++++ +++|++++++|++++... +
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~-~-------- 144 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVL-K-------- 144 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHH-c--------
Confidence 7889999999999999999999999999999999999999999999 999999999999887631 0
Q ss_pred CCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024756 164 TSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRG 208 (263)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~ 208 (263)
++.. .+.++++++|+.|.+..|+..++
T Consensus 145 -------------~~~~-----~~~l~aa~~~a~~~i~~~~~~~~ 171 (256)
T TIGR00688 145 -------------GSLP-----WEALVLAFSFTAYGLIRKALKNT 171 (256)
T ss_pred -------------CCch-----HHHHHHHHHHHHHHHHHhhcCCC
Confidence 0111 35788999999999999997543
No 8
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.84 E-value=1.6e-19 Score=161.00 Aligned_cols=209 Identities=12% Similarity=0.099 Sum_probs=158.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 024756 9 NTIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSG 87 (263)
Q Consensus 9 ~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~ 87 (263)
+.+++.+++++.++|+.+++++|.+.+ +.||.++.++|++++++++++ ... ++ . +.++|+++.....|++.+..
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~~~-~~-~--~~~~~~~~~~~~~g~~~~~~ 84 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFP-LVGAPGVTALRLALGTLILIAIFKP-WR-L--RFAKEQRLPLLFYGVSLGGM 84 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhH-Hh-c--cCCHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999998 699999999999999998887 432 22 1 24567888888888877777
Q ss_pred HHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCC
Q 024756 88 QIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDS 167 (263)
Q Consensus 88 ~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~ 167 (263)
+.++++++||+|++.++++.++.|+++.+++ +||++ +..++.++++|+.++.. .+.+
T Consensus 85 ~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--------~~~~~~i~~~Gv~li~~-~~~~---------- 141 (293)
T PRK10532 85 NYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--------DFVWVVLAVLGLWFLLP-LGQD---------- 141 (293)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--------HHHHHHHHHHHHheeee-cCCC----------
Confidence 8889999999999999999999999998876 34433 34567888999988752 1110
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHhcCCcccceeccCc
Q 024756 168 PDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIVENDIDAWKLTTGV 247 (263)
Q Consensus 168 ~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 247 (263)
. +.....|+++.++++++|++|.+..|+..++. ++... .++..++++.+.++....++. ..++. .
T Consensus 142 --------~-~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~-~~~~~---~ 206 (293)
T PRK10532 142 --------V-SHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAGE-ALWHW---S 206 (293)
T ss_pred --------c-ccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccCc-ccCCH---H
Confidence 0 11124699999999999999999999988777 46665 566777777777766543321 11111 2
Q ss_pred hhhhhhhHhhccc
Q 024756 248 EIMAIVCTVRTHQ 260 (263)
Q Consensus 248 ~~~~l~y~g~~~~ 260 (263)
.+..++|+|++++
T Consensus 207 ~~~~~l~lgv~~t 219 (293)
T PRK10532 207 ILPLGLAVAILST 219 (293)
T ss_pred HHHHHHHHHHHHH
Confidence 2556678888765
No 9
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.81 E-value=3.9e-18 Score=152.49 Aligned_cols=181 Identities=12% Similarity=0.122 Sum_probs=149.8
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCcceeee
Q 024756 26 LSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIYFTGLKFSSPTLSSA 105 (263)
Q Consensus 26 ~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~~~gl~~~~a~~asi 105 (263)
..+.-|.++++-.+|..+++.|+.++.+...+.+....+++++.++++++++...|++++.++.+.+.+++|++++.+++
T Consensus 17 ~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~l 96 (302)
T TIGR00817 17 FNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHT 96 (302)
T ss_pred HHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 34577998883367999999999998877655311111223456789999999999999888899999999999999999
Q ss_pred ccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcccccccchhHHHH
Q 024756 106 MANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLIGG 185 (263)
Q Consensus 106 i~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~G~ 185 (263)
+.+++|+++.+++++++|||++++ ++.|++++++|+.+... +. .+ ....|+
T Consensus 97 i~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~~--~~--------------------~~-~~~~G~ 147 (302)
T TIGR00817 97 IKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALASD--TE--------------------LS-FNWAGF 147 (302)
T ss_pred HHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhcC--Cc--------------------cc-ccHHHH
Confidence 999999999999999999999999 99999999999976531 10 01 124699
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh--hCCchHHHHHHHHHHHHHHHHHHHHHhcC
Q 024756 186 LLLVLVCISSAIWNVAQAATIR--GYPEEMTVVFFYTFFITIQALCFSVIVEN 236 (263)
Q Consensus 186 ~~~l~aa~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 236 (263)
+++++|+++|+++.+..||..+ +. ++...+.+++..+.+.++++....++
T Consensus 148 ~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~ 199 (302)
T TIGR00817 148 LSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEG 199 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999887 67 58999999999999999998876654
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.74 E-value=3.4e-16 Score=143.02 Aligned_cols=198 Identities=15% Similarity=0.141 Sum_probs=151.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHHHHH
Q 024756 9 NTIPFVAMVTVECTDVGLSVISKAALTKGMN-KFVSVVYYNALGTLILLPYFLFRRNKGASL--TWSLIWRFFLLGLIGS 85 (263)
Q Consensus 9 ~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~--~~~~~~~~~l~g~l~~ 85 (263)
+.+.....+.-..+=.......|.+++ ++| |..++.+|++++.++..+.+..+.++.++. .+++++.+...|+++.
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 334444444444444566778899988 799 999999999999877655222111222333 2457788889999994
Q ss_pred HHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCC
Q 024756 86 SGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTS 165 (263)
Q Consensus 86 ~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~ 165 (263)
..+...+.++++++++.+.++-+++|++++++++++++||++++ ++.++++++.|+.+... ++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~~--------- 188 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--KE--------- 188 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--cc---------
Confidence 45666779999999999999999999999999999999999999 99999999999999763 11
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC------chHHHHHHHHHHHHHHHHHHHHHhcC
Q 024756 166 DSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYP------EEMTVVFFYTFFITIQALCFSVIVEN 236 (263)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~~~i~~l~~~~~~~~ 236 (263)
.+. ...|++++++|+++|+++++..|+..++.+ ++.....++..++.+.++++....|.
T Consensus 189 -----------~~~-~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~ 253 (350)
T PTZ00343 189 -----------LHF-TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEG 253 (350)
T ss_pred -----------chh-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111 246999999999999999999999877541 35556666788999999988875543
No 11
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.74 E-value=9.2e-17 Score=142.33 Aligned_cols=166 Identities=13% Similarity=0.122 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHh-hcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024756 13 FVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFR-RNKGASLTWSLIWRFFLLGLIGSSGQII 90 (263)
Q Consensus 13 ~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~-~~~~~~~~~~~~~~~~l~g~l~~~~~~~ 90 (263)
+...++++++|+...+..|...+ +.++. ..+++..+++++.| ...+. +++++..+++.+......++.+..++.+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~-~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHAD-KEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLG 79 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC-chhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 46678999999999999997665 33443 47777777777777 54321 2223333344444444445555889999
Q ss_pred HHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCC
Q 024756 91 YFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDH 170 (263)
Q Consensus 91 ~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~ 170 (263)
++.|+++++++.++.+.++.|+++.+++++++|||++++ +++|+.+++.|++++.. ++.
T Consensus 80 ~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~~~-------------- 138 (281)
T TIGR03340 80 LAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-SRF-------------- 138 (281)
T ss_pred HHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-ccc--------------
Confidence 999999999999999999999999999999999999999 99999999999998763 110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 024756 171 PKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGY 209 (263)
Q Consensus 171 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~ 209 (263)
.+.+ ..|+.+.++++++|++|++..|+..++.
T Consensus 139 ------~~~~-~~g~~~~l~aal~~a~~~i~~k~~~~~~ 170 (281)
T TIGR03340 139 ------AQHR-RKAYAWALAAALGTAIYSLSDKAAALGV 170 (281)
T ss_pred ------cccc-hhHHHHHHHHHHHHHHhhhhccccccch
Confidence 0111 2478899999999999999998865554
No 12
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.68 E-value=5.3e-15 Score=133.35 Aligned_cols=195 Identities=19% Similarity=0.231 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHH-HHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 024756 22 TDVGLSVISKAALTKGMN-KFVSVVYYNALGTLILLP-YFLFRRNK-GASLTWSLIWRFFLLGLIGSSGQIIYFTGLKFS 98 (263)
Q Consensus 22 ~wg~~~~~~K~~~~~~~~-p~~~~~~R~~~a~l~ll~-~~~~~~~~-~~~~~~~~~~~~~l~g~l~~~~~~~~~~gl~~~ 98 (263)
+-..+.+.+....+++.+ |..-.+.-++.-.++..+ ..++++++ ..+..+++|...+++|++...++.+...|++||
T Consensus 24 ~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yT 103 (334)
T PF06027_consen 24 CITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYT 103 (334)
T ss_pred HHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 345556666655544443 444455555555555556 44433221 122234566677788999999999999999999
Q ss_pred CcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCccccccc
Q 024756 99 SPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQ 178 (263)
Q Consensus 99 ~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 178 (263)
+.+.+.++.++.-+++.+++++++|||.++. |++|+++++.|+.++...+... + ++...+
T Consensus 104 svtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~-----~---------~~~~~~ 163 (334)
T PF06027_consen 104 SVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLS-----G---------SDSSSG 163 (334)
T ss_pred cHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccc-----c---------ccCCCC
Confidence 9999999999999999999999999999999 9999999999998887522110 0 011234
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHhcCC
Q 024756 179 SEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIVEND 237 (263)
Q Consensus 179 ~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 237 (263)
++...||+++++++++||++++..++..++. +...+..+..++|.+...+....+|.+
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~ 221 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERS 221 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehh
Confidence 5667899999999999999999999999998 588889999999999988888777654
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.67 E-value=8.4e-15 Score=128.52 Aligned_cols=186 Identities=22% Similarity=0.259 Sum_probs=139.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-H
Q 024756 7 LQNTIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIG-S 85 (263)
Q Consensus 7 ~~~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~-~ 85 (263)
+++.......++..+.|+.+....|...++..++......|+..+.++..+...+++....+ .++++....+.+.++ .
T Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 81 (292)
T COG0697 3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRP-ALRPWLLLLLLALLGLA 81 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccc-cccchHHHHHHHHHHHH
Confidence 34455677788888999999999999887437777777889999998855422222111111 122234455556666 9
Q ss_pred HHHHHHHhhccccCcceeeeccchhHHHHHHHHH-HHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCC
Q 024756 86 SGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAV-IFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASST 164 (263)
Q Consensus 86 ~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~-l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~ 164 (263)
.++.+++.++++++++.++.+.++.|+++.+++. ++++||++++ ++.|+.+++.|++++... +..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~-~~~------- 147 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLG-GGG------- 147 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecC-CCc-------
Confidence 9999999999999999999999999999999997 6679999999 999999999999998741 100
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHH-HHHH
Q 024756 165 SDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVF-FYTF 221 (263)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~ 221 (263)
..+. ...|+.+.++++++|+++.+..|+.. +. ++..... +++.
T Consensus 148 -----------~~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~ 191 (292)
T COG0697 148 -----------GGIL-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLL 191 (292)
T ss_pred -----------chhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHH
Confidence 0011 45799999999999999999999987 55 3555555 4444
No 14
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.62 E-value=1.5e-15 Score=117.11 Aligned_cols=123 Identities=23% Similarity=0.384 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHHHhhcccc
Q 024756 21 CTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIG-SSGQIIYFTGLKFS 98 (263)
Q Consensus 21 ~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~~~~~~~gl~~~ 98 (263)
++||...+..|...+ ++||.+..++|+..+.+ +++ ..+.++++....+.+++......|.++ ..++.+++.+++++
T Consensus 1 ~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK-KISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhc-cCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 479999999999988 69999999999999998 555 444443333456778888888889897 99999999999999
Q ss_pred CcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 99 SPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 99 ~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
+++.++.+.+++|+++.+++++++||+++++ +++|+++.+.|++++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999998864
No 15
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.58 E-value=3e-13 Score=117.56 Aligned_cols=213 Identities=12% Similarity=0.084 Sum_probs=161.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCC---CCCCHHHHHHHHHHHHHH
Q 024756 9 NTIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKG---ASLTWSLIWRFFLLGLIG 84 (263)
Q Consensus 9 ~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~---~~~~~~~~~~~~l~g~l~ 84 (263)
..+|++..+.+.++||..+...|.. + ..|+.++.+.|.+.+.+.++. ....|+.+. ...++|.+..+.+.+.+.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~-~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li 82 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-E-PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI 82 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-c-cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 4679999999999999999999985 4 689999999999999999887 544333211 112445677777778888
Q ss_pred HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCC
Q 024756 85 SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASST 164 (263)
Q Consensus 85 ~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~ 164 (263)
+.+...|.++..+-..-++|.=.+..|++.++++.+++|||+++. |++++.++.+|+.......
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~---------- 146 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLL---------- 146 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHc----------
Confidence 999999999999999999999999999999999999999999999 9999999999998877521
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHhcCCcccceec
Q 024756 165 SDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIVENDIDAWKLT 244 (263)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 244 (263)
++..+ ..+.=+++|+.|..+-|+. +. ++.+-.+..+..-....+...++.+.+.+....+
T Consensus 147 ------------g~lpw-----val~la~sf~~Ygl~RK~~--~v-~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~ 206 (293)
T COG2962 147 ------------GSLPW-----VALALALSFGLYGLLRKKL--KV-DALTGLTLETLLLLPVALIYLLFLADSGQFLQQN 206 (293)
T ss_pred ------------CCCcH-----HHHHHHHHHHHHHHHHHhc--CC-chHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcC
Confidence 12233 4555678899998876654 44 3566667777777777777766665543211212
Q ss_pred cCchhhhhhhHhhcc
Q 024756 245 TGVEIMAIVCTVRTH 259 (263)
Q Consensus 245 ~~~~~~~l~y~g~~~ 259 (263)
.+..++-++..|.++
T Consensus 207 ~~~~~~LLv~aG~vT 221 (293)
T COG2962 207 ANSLWLLLVLAGLVT 221 (293)
T ss_pred CchHHHHHHHhhHHH
Confidence 334466666666654
No 16
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.57 E-value=3.2e-14 Score=109.07 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKG-ASLTWSLIWRFFLLGLIGSSGQI 89 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~-~~~~~~~~~~~~l~g~l~~~~~~ 89 (263)
...+.++++++||...++.|...+ ++||...++.|.+.....+.. ....++.+. ...+.|.|..+++.|+.++++..
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl 82 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence 467889999999999999999999 899999999999998888887 555433222 12477889999999988899999
Q ss_pred HHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 90 IYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 90 ~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
+||.++|...++...-+.-+.|++++++++++++||++.+ +++|+++..+|++++.
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs 138 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999 9999999999998764
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.53 E-value=1.2e-15 Score=130.38 Aligned_cols=201 Identities=15% Similarity=0.186 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 024756 11 IPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQI 89 (263)
Q Consensus 11 ~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~ 89 (263)
++..+..++ ..+..+.++.+...+ .+|.+....|++.-.++..| ..+++..-..+ ..+.+.+++.|+.|+.+..
T Consensus 38 ~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp--~g~R~~LiLRg~mG~tgvm 112 (346)
T KOG4510|consen 38 LGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGP--EGKRKWLILRGFMGFTGVM 112 (346)
T ss_pred cCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecC--CCcEEEEEeehhhhhhHHH
Confidence 344555555 444444455554444 69999999998888877777 44432211111 2334466788999977888
Q ss_pred HHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCC
Q 024756 90 IYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPD 169 (263)
Q Consensus 90 ~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~ 169 (263)
..|++++|.+.++|++++++.|+++.+++++++|||.++. ..+|..+.+.|+++++ +.+.....++..|
T Consensus 113 lmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv--RPpFlFG~~t~g~--- 181 (346)
T KOG4510|consen 113 LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV--RPPFLFGDTTEGE--- 181 (346)
T ss_pred HHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe--cCCcccCCCcccc---
Confidence 8899999999999999999999999999999999999999 9999999999999987 4554332211111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHH
Q 024756 170 HPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSV 232 (263)
Q Consensus 170 ~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 232 (263)
+.+.-.....|.+..+.+++.-|...++.|++.|+.+ ....+.+...++.+..++...
T Consensus 182 ----~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~ 239 (346)
T KOG4510|consen 182 ----DSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCA 239 (346)
T ss_pred ----ccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHh
Confidence 1111112245888999999999999999999989884 555566677777776665543
No 18
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.43 E-value=4.4e-12 Score=113.06 Aligned_cols=180 Identities=16% Similarity=0.136 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQII 90 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~ 90 (263)
++++.++++++||++.+..|... +.++.++. |..++.+++.. ....++ .+ +..++.+..-++.|++-..++.+
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~-~~-~~~~~~~~~g~l~G~~w~ig~~~ 75 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVL-PE-FWALSIFLVGLLSGAFWALGQIN 75 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhC-Cc-ccccHHHHHHHHHHHHHHhhhhh
Confidence 35778899999999999999854 67887775 78888887776 444332 11 11234444455556666888899
Q ss_pred HHhhccccCcceeeeccc-hhHHHHHHHHHHHhhccccccccCcccc----chhHHHHHHHHHHHHhhcCccccccCCCC
Q 024756 91 YFTGLKFSSPTLSSAMAN-LIPIYTFLLAVIFRIEKLDLRRSSSQAK----TLGATVAVTGAFMITLYRGPLLLMASSTS 165 (263)
Q Consensus 91 ~~~gl~~~~a~~asii~~-~~Pv~~~ila~l~~~e~~~~~~~~~~~~----~~g~~l~~~G~~ll~~~~~~~~~~~~s~~ 165 (263)
|+.++++++.+.+..+.+ +.|++..+.+.+++|||.+++ + ++|++++++|++++... +++ +.
T Consensus 76 ~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~-~~~-~~----- 142 (290)
T TIGR00776 76 QFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRS-KDK-SA----- 142 (290)
T ss_pred HHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEec-ccc-cc-----
Confidence 999999999999998877 888899999999999999999 8 99999999998887531 110 00
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 024756 166 DSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTF 221 (263)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~ 221 (263)
+.....+...|..+.++|+++|+.|.+..|+. +. +|.+.++.+..
T Consensus 143 --------~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~ 187 (290)
T TIGR00776 143 --------GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAI 187 (290)
T ss_pred --------ccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHH
Confidence 00000233569999999999999999999985 46 57777444443
No 19
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.40 E-value=3.7e-12 Score=110.93 Aligned_cols=131 Identities=20% Similarity=0.269 Sum_probs=112.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--HHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 024756 8 QNTIPFVAMVTVECTDVGLSVISKAALTKGMNK--FVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIG 84 (263)
Q Consensus 8 ~~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p--~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~ 84 (263)
.+.++..+.+++.++|+...+..|...+ +.++ .....+|+.++.+++.+ ....++ ....+.+++......++++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQFTGWVLLLGALLLLPFAWFLGP--NPQALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHhcCC--CCCcchHHHHHHHHHHHHH
Confidence 3457889999999999999999999876 5664 45566789999999888 554332 2234677887788888888
Q ss_pred -HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHH
Q 024756 85 -SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGA 147 (263)
Q Consensus 85 -~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~ 147 (263)
..++.+|++++++.+++.++++.+++|+++.++++++++|+++.+ ++.|..+.+.|+
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~ 259 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999999999 999999999986
No 20
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.35 E-value=1.1e-10 Score=99.58 Aligned_cols=186 Identities=16% Similarity=0.124 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIY 91 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~ 91 (263)
++++++.+.+.-=...-+.|..+. ..+|.-.+++|..+++++++..+.-+| ++++++++..+...|...+.-+.+|
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP-~vG~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~F 88 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFP-LVGAAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLF 88 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHcc-ccChhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHH
Confidence 678888888887777889999998 799999999999999999888322122 3467889999888888888888999
Q ss_pred HhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCC
Q 024756 92 FTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHP 171 (263)
Q Consensus 92 ~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~ 171 (263)
|.++++.|-+.+..+=++-|+.++.++. +| .+ ..+-+.+++.|..++.- .++.
T Consensus 89 Y~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~------d~vwvaLAvlGi~lL~p-~~~~-------------- 141 (292)
T COG5006 89 YLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LR------DFVWVALAVLGIWLLLP-LGQS-------------- 141 (292)
T ss_pred HHHHHhccchhhhhhhhccHHHHHHHhc----cc--hh------hHHHHHHHHHHHHhhee-ccCC--------------
Confidence 9999999999999999999998887753 11 22 56677888999888752 1211
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHh
Q 024756 172 KLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIV 234 (263)
Q Consensus 172 ~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 234 (263)
.+.....|..+.+.++.||+.|++..||..+.. +..+-+...+.++.+..+++....
T Consensus 142 -----~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ 198 (292)
T COG5006 142 -----VWSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQ 198 (292)
T ss_pred -----cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhh
Confidence 111224799999999999999999999988766 456778889999999999988643
No 21
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.24 E-value=1.4e-11 Score=94.57 Aligned_cols=101 Identities=26% Similarity=0.432 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHH-HHHHhhcC--CCCCCHHHHHHHHHHHHHH-HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHH
Q 024756 45 VYYNALGTLILLP-YFLFRRNK--GASLTWSLIWRFFLLGLIG-SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVI 120 (263)
Q Consensus 45 ~~R~~~a~l~ll~-~~~~~~~~--~~~~~~~~~~~~~l~g~l~-~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l 120 (263)
.+|+.++.+++.. ...++|.+ .+..+++++...+..|.++ ..++.++++|+++.+ +.++.+.++.|+++.+++.+
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5899999999888 66543211 1223335566667778888 699999999999999 58889999999999999999
Q ss_pred HhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 121 FRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 121 ~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
++|||++++ +++|++++++|++++..
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIAW 106 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence 999999999 99999999999999875
No 22
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.20 E-value=3e-10 Score=101.35 Aligned_cols=133 Identities=14% Similarity=0.080 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHH-HHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIG-SSG 87 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~ 87 (263)
..+.++.++++++|+...+..|...+ +.++...... ..++++++.+ ...... ....+...+.....+|+++ .++
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~~-~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGA-EHGPATVAIG-SLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHH-HHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 45888999999999999999999765 6788777544 4556666666 443221 1224556666667889998 899
Q ss_pred HHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 88 QIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 88 ~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
+.+|++++++.++++++.+.+++|+++.++++++++|+++.. +++|..+.+.|++....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 99999999999988865
No 23
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.20 E-value=2.8e-10 Score=101.41 Aligned_cols=135 Identities=19% Similarity=0.087 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHH-HHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIG-SSG 87 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~ 87 (263)
..+.++.++++++|+...+..|.... -++....++++.++.+.+.+ ............+.+.|..+...++++ ..+
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 46888999999999999999998543 34566778899999888877 543322111123567888888889998 899
Q ss_pred HHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 88 QIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 88 ~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
+.+|++++++.++++++++.+++|+++.++++++++|+++.. +++|.++.+.|++++..
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 99999999999988764
No 24
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.18 E-value=8.2e-11 Score=105.31 Aligned_cols=134 Identities=20% Similarity=0.243 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCcccc
Q 024756 80 LGLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLL 159 (263)
Q Consensus 80 ~g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~ 159 (263)
.+.+-+.++++++.++.+|+.+..+++.++..+|+..++.++..||+++. |.+++.+.+.|++++...+.. +
T Consensus 165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~--~ 236 (416)
T KOG2765|consen 165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSK--Q 236 (416)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEecccc--c
Confidence 45555999999999999999999999999999999999999999999999 999999999999998753211 1
Q ss_pred ccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC---chHHHHHHHHHHHHHHHHHHHHHh
Q 024756 160 MASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYP---EEMTVVFFYTFFITIQALCFSVIV 234 (263)
Q Consensus 160 ~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~i~~l~~~~~~ 234 (263)
. ++....+...|+++++++|+.||+|+++.||-..+.+ +.-.+-.+..++..+++.+..+++
T Consensus 237 ~-------------~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL 301 (416)
T KOG2765|consen 237 N-------------SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL 301 (416)
T ss_pred c-------------ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 0 1112345578999999999999999999999766652 122222334444444444444433
No 25
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.15 E-value=1.1e-09 Score=100.49 Aligned_cols=133 Identities=11% Similarity=0.122 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHHHHHH-HHHHhhcCC----CCCCHHHHHHHHHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALTKGMNK-FVSVVYYNALGTLILLP-YFLFRRNKG----ASLTWSLIWRFFLLGLIGS 85 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~~~~~p-~~~~~~R~~~a~l~ll~-~~~~~~~~~----~~~~~~~~~~~~l~g~l~~ 85 (263)
+...++.++++|+...+..|.... ..|+ ...+++...++.+.+.+ .....+... ...+.. ...++..++...
T Consensus 190 G~~l~l~aa~~wa~~~il~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t~ 267 (358)
T PLN00411 190 GGALLTIQGIFVSVSFILQAHIMS-EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAIITS 267 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHHHH
Confidence 667899999999999999998776 4544 46677777777666655 444332111 112222 222444565557
Q ss_pred HHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 86 SGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 86 ~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
+++.+|++++++.+|+.++++.+++|+++.++++++++|+++.. +++|.++.+.|+.+...
T Consensus 268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMW 328 (358)
T ss_pred HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 78899999999999999999999999999999999999999999 99999999999998864
No 26
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.11 E-value=9e-10 Score=98.33 Aligned_cols=132 Identities=16% Similarity=0.196 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQ 88 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~ 88 (263)
..+.+++++++++|+...+..|...+ +.++.... +..+.+.+.+ .... .......+.+.+..+.+.|+...+++
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~---~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~t~~~~ 229 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLF---FILTALALWIKYFLS-PQPAMVFSLPAIIKLLLAAAAMGFGY 229 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHH---HHHHHHHHHHHHHHh-cCccccCCHHHHHHHHHHHHHHHHHH
Confidence 34788999999999999999999765 67876643 2333344444 3332 21112355677777777775448899
Q ss_pred HHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 89 IIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 89 ~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
.+|++++|+.++++++.+.+++|++..++++++++|+++.. +++|.++.+.|+++...
T Consensus 230 ~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 230 AAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence 99999999999999999999999999999999999999999 99999999999988754
No 27
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.06 E-value=2.1e-09 Score=95.29 Aligned_cols=132 Identities=15% Similarity=0.092 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHH----HHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFV----SVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIG 84 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~----~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~ 84 (263)
.++..+.++++++|+...+..|...+ +.+|.. ...+.+....+.+.+ ...++++ ....+.+.+......+.+.
T Consensus 143 ~~g~~~~l~aal~~a~~~i~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 220 (281)
T TIGR03340 143 RKAYAWALAAALGTAIYSLSDKAAAL-GVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR-SMFPYARQILPSATLGGLM 220 (281)
T ss_pred hhHHHHHHHHHHHHHHhhhhcccccc-chhcccccHHHHHHHHHHHHHHHHHHHHHHhcc-chhhhHHHHHHHHHHHHHH
Confidence 45667789999999999999987543 344432 223333333222222 2111111 1111222333444555555
Q ss_pred -HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHH
Q 024756 85 -SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFM 149 (263)
Q Consensus 85 -~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~l 149 (263)
..++.+|++++++.+++.++.+.+++|++..++++++++|+++.. +++|..+.+.|+.+
T Consensus 221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~------~~iG~~lil~Gv~l 280 (281)
T TIGR03340 221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLT------RLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHhHHh
Confidence 889999999999999999999999999999999999999999999 99999999999876
No 28
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.96 E-value=1.5e-08 Score=90.62 Aligned_cols=136 Identities=14% Similarity=0.190 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHH-HHHHhhcC-----CCCCCHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMN--KFVSVVYYNALGTLILLP-YFLFRRNK-----GASLTWSLIWRFFLLG 81 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~--p~~~~~~R~~~a~l~ll~-~~~~~~~~-----~~~~~~~~~~~~~l~g 81 (263)
..+.++.++++++|+...+..|...++.-+ ......+-...+.+.+.. ....++.. ....+.+.|..+...|
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 458889999999999999999986542212 223334444444433333 22222111 1234667888888999
Q ss_pred HHH-HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 82 LIG-SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 82 ~l~-~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
++. ..++.+|+.++++.++++++.+.+++|++..++++++++|+++.. +++|.++.+.|+.+..
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHh
Confidence 999 899999999999999999999999999999999999999999999 9999999999998765
No 29
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.95 E-value=7.5e-08 Score=86.30 Aligned_cols=172 Identities=17% Similarity=0.166 Sum_probs=133.9
Q ss_pred hHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHH
Q 024756 40 KFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLA 118 (263)
Q Consensus 40 p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila 118 (263)
|..+++.++....+.-.+ ....+++ +.++..+......+++..++..+-+.+++|.|...-.++-++.|+.+++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~ 108 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFILLSLFKFP---KSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILG 108 (303)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcccc---CCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHH
Confidence 888999999998887766 4333211 223344556677788888899999999999999998999999999999999
Q ss_pred HHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHH
Q 024756 119 VIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIW 198 (263)
Q Consensus 119 ~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~ 198 (263)
.+++|+|.+++ +++++++..+|+++....+..... .+...+.+...|+.+.+++.++-+..
T Consensus 109 ~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~-------------~~~~~~~~~~~G~~ll~~sl~~~a~~ 169 (303)
T PF08449_consen 109 VLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSS-------------SSNSSSFSSALGIILLLLSLLLDAFT 169 (303)
T ss_pred HHhcCccccHH------HHHHHHHHHhhHheeeeccccccc-------------ccccccccchhHHHHHHHHHHHHHHH
Confidence 99999999999 999999999999887653211100 00111112234999999999999999
Q ss_pred HHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHH
Q 024756 199 NVAQAATIRGYP-EEMTVVFFYTFFITIQALCFSVI 233 (263)
Q Consensus 199 ~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~ 233 (263)
.+.+++..++++ ++...+++...++.+..++....
T Consensus 170 ~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~ 205 (303)
T PF08449_consen 170 GVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFL 205 (303)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887664 57888899999999888877766
No 30
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.86 E-value=1e-08 Score=91.73 Aligned_cols=138 Identities=19% Similarity=0.233 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCC---------CCHHHHHH-
Q 024756 9 NTIPFVAMVTVECTDVGLSVISKAALTK-GMNKFVSVVYYNALGTLILLP-YFLFRRNKGAS---------LTWSLIWR- 76 (263)
Q Consensus 9 ~~~~~~~~l~a~~~wg~~~~~~K~~~~~-~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~---------~~~~~~~~- 76 (263)
+..|.++.++++++|+...+..|...++ +.||..+..+....+++.++| ....+...... .+......
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 3458889999999999999999987641 589999999999999999888 65433111000 00001111
Q ss_pred HHHHHHHH-HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 77 FFLLGLIG-SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 77 ~~l~g~l~-~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
....+... ...+.+++.++++++++.+++..+..|++++++++++++|+++.+ +++|.++.+.|+.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence 22223222 334467778999999999999999999999999999999999999 99999999999988763
No 31
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.82 E-value=2e-10 Score=98.08 Aligned_cols=190 Identities=15% Similarity=0.164 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Q 024756 16 MVTVECTDVGLSVISKAALTKGMN-KFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIYFT 93 (263)
Q Consensus 16 ~l~a~~~wg~~~~~~K~~~~~~~~-p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~~~ 93 (263)
-+++.++=+.++..... .+++++ |..-++..+..-+++..| ..+|++ .-+-.|...+++|+...-++++...
T Consensus 24 QiLSL~~t~~a~tss~l-a~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-----~~~~~~~hYilla~~DVEaNy~vV~ 97 (336)
T KOG2766|consen 24 QILSLLITSTAFTSSEL-ARKGINAPTSQTFLNYVLLALVYGPIMLFRRK-----YIKAKWRHYILLAFVDVEANYFVVK 97 (336)
T ss_pred HHHHHHHHcchhhhHHH-HhccCCCccHHHHHHHHHHHHHHhhHHHhhhH-----HHHHHHHHhhheeEEeecccEEEee
Confidence 34444444444443333 333444 556688888888888888 666432 2233455678888888888888899
Q ss_pred hccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcc
Q 024756 94 GLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKL 173 (263)
Q Consensus 94 gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~ 173 (263)
+.|||+-+....+.+-.-..+.+++++++|.|-++. |+.|+++|+.|++++++.+ .+. +
T Consensus 98 AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sD----------V~a----g- 156 (336)
T KOG2766|consen 98 AYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFSD----------VHA----G- 156 (336)
T ss_pred ehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEee----------ecc----c-
Confidence 999999999888876655566689999999999999 9999999999999988521 111 0
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHH
Q 024756 174 LFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVI 233 (263)
Q Consensus 174 ~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 233 (263)
+.+++++...||.+++++|.+||+.++......|+. +....+....++|++...+...+
T Consensus 157 d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i~ 215 (336)
T KOG2766|consen 157 DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFIF 215 (336)
T ss_pred cccCCCCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhh
Confidence 223456667899999999999999999999999999 58999999999999998888443
No 32
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=98.76 E-value=2.6e-07 Score=80.44 Aligned_cols=153 Identities=14% Similarity=0.118 Sum_probs=114.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHH
Q 024756 70 TWSLIWRFFLLGLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFM 149 (263)
Q Consensus 70 ~~~~~~~~~l~g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~l 149 (263)
++|+.....+=+++..+.+.+.|.++++.+|+.-.++..+--+++++++++++|+|++++ ||.++.+.+.|+.+
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~l 86 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVVL 86 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHhe
Confidence 356666677778888889999999999999999999999999999999999999999999 99999999999998
Q ss_pred HHhhcCccccccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHH
Q 024756 150 ITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYP-EEMTVVFFYTFFITIQAL 228 (263)
Q Consensus 150 l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l 228 (263)
....+....+ + ++. .+.++...+.+...|.++.++++++-++..+..+|..|+.+ +....+....+.|.+..+
T Consensus 87 v~~~~~~~~~---~-~~~--~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~ 160 (244)
T PF04142_consen 87 VQLSSSQSSD---N-SSS--SSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNL 160 (244)
T ss_pred eecCCccccc---c-ccc--cccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Confidence 7642111100 0 000 00001112334578999999999999999999999988774 355555666666666665
Q ss_pred HHHHHh
Q 024756 229 CFSVIV 234 (263)
Q Consensus 229 ~~~~~~ 234 (263)
+...+.
T Consensus 161 ~~~~~~ 166 (244)
T PF04142_consen 161 LALLLS 166 (244)
T ss_pred HHHhcc
Confidence 554443
No 33
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.74 E-value=1.3e-07 Score=84.40 Aligned_cols=133 Identities=11% Similarity=0.099 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 024756 14 VAMVTVECTDVGLSVISKAALTKG-MNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIYF 92 (263)
Q Consensus 14 ~~~l~a~~~wg~~~~~~K~~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~~ 92 (263)
...++++++|+...+..|....+. .+......+-..++.+...+............+...+......|+....++.+|+
T Consensus 152 ~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~ 231 (296)
T PRK15430 152 IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFT 231 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccCCcccccCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 346778899999999999864311 2233334444444443322211000000111122333444455665588999999
Q ss_pred hhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 93 TGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 93 ~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
.++++.+++.++.+.+++|++..++++++++|+++.. +++|.++.+.|+.++..
T Consensus 232 ~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~------~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 232 AAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGAD------KMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 99999999999888764
No 34
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.72 E-value=2.4e-07 Score=74.18 Aligned_cols=132 Identities=25% Similarity=0.365 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHH-HHHHhhcCCC----CC-------CHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALTK------GMNKFVSVVYYNALGTLILLP-YFLFRRNKGA----SL-------TWSL 73 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~~------~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~----~~-------~~~~ 73 (263)
|+.+.+.+.++-+...+..|...++ ..++.++..+....+.++++| ....++.+.. .. +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 4567889999999999999998875 689999999999999999999 7665443210 00 2233
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHH
Q 024756 74 IWRFFLLGLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFM 149 (263)
Q Consensus 74 ~~~~~l~g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~l 149 (263)
+..++..|++....+...+..+++++|...++....-.+.+.+.++++++|+++.+ ++.|+++++.|.++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence 45555667777889999999999999999999999999999999999999999999 99999999999864
No 35
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.68 E-value=2.4e-07 Score=82.60 Aligned_cols=128 Identities=16% Similarity=0.152 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH---HHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNA---LGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGS 85 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~---~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~ 85 (263)
++++.+.+++.+.|+...+..|.. +.||...++.... +++.++.+ . ++ .++. +.+......+.|++-.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~--~~--~~~~-~~~~~~~~~~~Gi~~~ 222 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH--IL--AKPL-KKYAILLNILPGLMWG 222 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH--hc--ccch-HHHHHHHHHHHHHHHH
Confidence 679999999999999999999974 4788888544444 44444444 3 11 1222 2233334445788778
Q ss_pred HHHHHHHhhcc-ccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccc----hhHHHHHHHHHHHH
Q 024756 86 SGQIIYFTGLK-FSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKT----LGATVAVTGAFMIT 151 (263)
Q Consensus 86 ~~~~~~~~gl~-~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~----~g~~l~~~G~~ll~ 151 (263)
.++.+|+.+.+ +.+++.++++.+.+|+...+++++++||+.+++ ++ +|.++.+.|+.++.
T Consensus 223 ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 223 IGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 89999999999 999999999999999999999999999999999 99 99999999998874
No 36
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.67 E-value=4.7e-07 Score=82.89 Aligned_cols=137 Identities=15% Similarity=0.163 Sum_probs=100.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHH-HHHHhhcCC-C-------CCCHHH
Q 024756 9 NTIPFVAMVTVECTDVGLSVISKAALTK------GMNKFVSVVYYNALGTLILLP-YFLFRRNKG-A-------SLTWSL 73 (263)
Q Consensus 9 ~~~~~~~~l~a~~~wg~~~~~~K~~~~~------~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~-~-------~~~~~~ 73 (263)
+..|.++.+++.++|+...+..|...++ ..++.....+...+++++++| ....+.... . ..+...
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 4568999999999999999999998762 256777777778899999888 553321100 0 000001
Q ss_pred HHHHHHHHHHHHHHHHHHH----hhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHH
Q 024756 74 IWRFFLLGLIGSSGQIIYF----TGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFM 149 (263)
Q Consensus 74 ~~~~~l~g~l~~~~~~~~~----~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~l 149 (263)
+..+....+..+..+.+++ .+++++++..+++..++.|+++.++++++++|+++.. +++|.++.+.|+++
T Consensus 272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~l 345 (350)
T PTZ00343 272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALL 345 (350)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHH
Confidence 1111111222244444444 6999999999999999999999999999999999999 99999999999987
Q ss_pred HH
Q 024756 150 IT 151 (263)
Q Consensus 150 l~ 151 (263)
-.
T Consensus 346 Ys 347 (350)
T PTZ00343 346 YS 347 (350)
T ss_pred Hh
Confidence 54
No 37
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.67 E-value=5.4e-07 Score=78.85 Aligned_cols=132 Identities=18% Similarity=0.279 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVV-YYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIG-SSG 87 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~-~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~ 87 (263)
..+..+.+.+.++|+...+..|... ..++..... +.+........+.....+ . ...+.+.+......|+++ ..+
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~i~ 228 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFFLSGF-G-APILSRAWLLLLYLGVFSTGLA 228 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHHhccc-c-ccCCHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999765 466766666 444422222222222111 1 234567888888899999 689
Q ss_pred HHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 88 QIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 88 ~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
+.+++.++++.+++.++.+.++.|++..++++++++|+++.. +++|..+.+.|+.+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~ 286 (292)
T COG0697 229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 9999999999998875
No 38
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.50 E-value=7.7e-07 Score=68.11 Aligned_cols=67 Identities=18% Similarity=0.205 Sum_probs=61.7
Q ss_pred HHHHHH-HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 79 LLGLIG-SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 79 l~g~l~-~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
..++.+ ..++.++..++++.|.+.|-.+.++.|+++.+++++++|||++.+ |++|+.+.++|++++.
T Consensus 41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 344466 889999999999999999999988999999999999999999999 9999999999998874
No 39
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.34 E-value=0.00048 Score=62.08 Aligned_cols=205 Identities=12% Similarity=0.116 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHH-HHHHh----hcCCCCC------CHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALTKG---MNKFVSVVYYNALGTLILLP-YFLFR----RNKGASL------TWSLIWRF 77 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~~~---~~p~~~~~~R~~~a~l~ll~-~~~~~----~~~~~~~------~~~~~~~~ 77 (263)
-++.++...+-++......|+.-..+ +.|.+.++.--++-.++-.. .+... ++..+.+ ++++....
T Consensus 16 k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~ 95 (345)
T KOG2234|consen 16 KYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV 95 (345)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence 34567788888999999999876544 56777777666666555444 33321 1111111 22333444
Q ss_pred HHHHHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCcc
Q 024756 78 FLLGLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPL 157 (263)
Q Consensus 78 ~l~g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~ 157 (263)
.+=+.+.++.+-++|.++.+.+++.-.+...+--+.|+++..+++++|++++ ||.++++.++|+.++-.. .+.
T Consensus 96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~-~~~ 168 (345)
T KOG2234|consen 96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLP-SLS 168 (345)
T ss_pred HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhcc-CCC
Confidence 4446666777889999999999999999999999999999999999999999 999999999999998631 111
Q ss_pred ccccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHHh
Q 024756 158 LLMASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYP-EEMTVVFFYTFFITIQALCFSVIV 234 (263)
Q Consensus 158 ~~~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~~ 234 (263)
. ++. .......+...|....+.++++-++-.+.-.++.|+-. +....+.-..++|.+..+...+..
T Consensus 169 ~----~~a-------~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~ 235 (345)
T KOG2234|consen 169 P----TGA-------KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ 235 (345)
T ss_pred C----CCc-------cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 0 000 00111234568999999999999999999999987653 344455555666666555554443
No 40
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=98.27 E-value=3.6e-06 Score=75.59 Aligned_cols=181 Identities=17% Similarity=0.166 Sum_probs=140.2
Q ss_pred HHHHHHHHh--cCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCccee
Q 024756 27 SVISKAALT--KGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIYFTGLKFSSPTLS 103 (263)
Q Consensus 27 ~~~~K~~~~--~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~~~gl~~~~a~~a 103 (263)
....|..++ .---|..++..++..+.+.++. ..++-++..+..++..+..++.+|++.+++..+-+.++++.+.+..
T Consensus 33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~ 112 (316)
T KOG1441|consen 33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFY 112 (316)
T ss_pred EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHH
Confidence 344577766 3345888888888888887776 3332221111123345667778898888899999999999999999
Q ss_pred eeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcccccccchhHH
Q 024756 104 SAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLI 183 (263)
Q Consensus 104 sii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 183 (263)
-.+=.++|+++.++++++.+|+.+.. .+..++....|+.+... ++ .+.+ ..
T Consensus 113 q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~--~e--------------------~~fn-~~ 163 (316)
T KOG1441|consen 113 QTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV--TE--------------------LSFN-LF 163 (316)
T ss_pred HHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee--cc--------------------cccc-HH
Confidence 99999999999999999999999999 99999999999988753 11 1223 47
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh----hCCchHHHHHHHHHHHHHHHH-HHHHHhcCC
Q 024756 184 GGLLLVLVCISSAIWNVAQAATIR----GYPEEMTVVFFYTFFITIQAL-CFSVIVEND 237 (263)
Q Consensus 184 G~~~~l~aa~~~a~~~v~~k~~~~----~~~~~~~~~~~~~~~~~i~~l-~~~~~~~~~ 237 (263)
|...++.+.+..+...++.|+..+ +. +++....++.-++.+.++ |.....+++
T Consensus 164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~~~ 221 (316)
T KOG1441|consen 164 GFISAMISNLAFALRNILSKKLLTSKGESL-NSMNLLYYTAPISLIFLLIPFLDYVEGN 221 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccc-CchHHHHHhhhHHHHHHhcchHhhhccc
Confidence 999999999999999999999874 23 689999999999999888 766555543
No 41
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=98.23 E-value=7.9e-05 Score=65.79 Aligned_cols=201 Identities=16% Similarity=0.165 Sum_probs=126.0
Q ss_pred hhhHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcC---CCCCCHHHHH-HHHH
Q 024756 7 LQNTIPFVAMVTVECTD--VGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNK---GASLTWSLIW-RFFL 79 (263)
Q Consensus 7 ~~~~~~~~~~l~a~~~w--g~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~---~~~~~~~~~~-~~~l 79 (263)
+.|.-..+.+++..-+. |..+...+...+ --=|+.++.+.++.=.++-.. -...+++. +-..+|++-. +...
T Consensus 11 ~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~-f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aP 89 (349)
T KOG1443|consen 11 LMNRVLTLALVLLYYFLSIGLTFYFKWLTKN-FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAP 89 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhh
Confidence 33333444444444333 334444444322 112556666655543333222 11112111 1235666544 4666
Q ss_pred HHHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCcccc
Q 024756 80 LGLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLL 159 (263)
Q Consensus 80 ~g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~ 159 (263)
.|+..+..-++-+++++|++.+.=+..=++.++|+.+.+.++.-||.++. -..-+.+..+|+++.+. ++.+.
T Consensus 90 talata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~------L~l~v~lI~~Glflft~-KsTqf- 161 (349)
T KOG1443|consen 90 TALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-KSTQF- 161 (349)
T ss_pred hhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-cccce-
Confidence 78888888999999999999998888889999999999998888999999 77777777788877764 33221
Q ss_pred ccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC----chHHHHHHHHHHHHHHHHHHHHHhc
Q 024756 160 MASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYP----EEMTVVFFYTFFITIQALCFSVIVE 235 (263)
Q Consensus 160 ~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~----~~~~~~~~~~~~~~i~~l~~~~~~~ 235 (263)
+ ..|..+++.|+++-++==...++..++.| +|++......-.-.+.+++..+.+|
T Consensus 162 --------------------~-i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fE 220 (349)
T KOG1443|consen 162 --------------------N-IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFE 220 (349)
T ss_pred --------------------e-ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHc
Confidence 1 24777777766665554444555444442 5777777766667777777777777
Q ss_pred CC
Q 024756 236 ND 237 (263)
Q Consensus 236 ~~ 237 (263)
+.
T Consensus 221 G~ 222 (349)
T KOG1443|consen 221 GL 222 (349)
T ss_pred cc
Confidence 64
No 42
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.12 E-value=2.4e-05 Score=61.46 Aligned_cols=116 Identities=16% Similarity=0.252 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIG-SSGQII 90 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~~~~ 90 (263)
++++++...++-+..-++.|...+ +.+........ . . .... .. + ....+..|+.. .+++.+
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~-~~g~~~~~~~~--~----~-~~~~-~~------~---p~~~i~lgl~~~~la~~~ 64 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMS-RLPLLSHAWDF--I----A-ALLA-FG------L---ALRAVLLGLAGYALSMLC 64 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh-hCCCccchhHH--H----H-HHHH-Hh------c---cHHHHHHHHHHHHHHHHH
Confidence 567777788888888889998876 44443322211 0 0 0100 00 0 01245667787 999999
Q ss_pred HHhhccccCcceeeeccchhHHHHHHHHHH--HhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 91 YFTGLKFSSPTLSSAMANLIPIYTFLLAVI--FRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 91 ~~~gl~~~~a~~asii~~~~Pv~~~ila~l--~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
|..++++.|.+.|.-+.+..+.++.+.++. ++||+++.+ |++|+++.++|++++.
T Consensus 65 w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 65 WLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence 999999999999998888888888888875 799999999 9999999999999976
No 43
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.03 E-value=9.5e-05 Score=67.12 Aligned_cols=138 Identities=12% Similarity=0.014 Sum_probs=109.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCC--CCCHHHHHHHHHHHHHH
Q 024756 8 QNTIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGA--SLTWSLIWRFFLLGLIG 84 (263)
Q Consensus 8 ~~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~--~~~~~~~~~~~l~g~l~ 84 (263)
...+|-+.++.++++||...+.-|.... +.|+.++...=-+++.++..+ ....+|+... +++.+....++.-++..
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~-~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~l 243 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVK-KAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCL 243 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHH
Confidence 3467889999999999999999999888 689999988888889988888 6655554432 23444444333333333
Q ss_pred HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 85 SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 85 ~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
+..+.+.-..+++++|+...+=.-+..++..+.+.+++|+++++. .++|.++.++|.++...
T Consensus 244 f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 244 FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNL 305 (334)
T ss_pred HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEc
Confidence 666677778899999998887777889999999999999999999 99999999999988764
No 44
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.01 E-value=4.6e-05 Score=65.62 Aligned_cols=136 Identities=15% Similarity=0.095 Sum_probs=109.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 024756 6 WLQNTIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIG 84 (263)
Q Consensus 6 ~~~~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~ 84 (263)
|-.+.-+..+.+.+..||...-+..|.+-+ ..+-.+-+..-+.+++++.+| -.- .- ...-.+.+.+..-..+|++.
T Consensus 143 ~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~-~a-g~~l~~p~ll~laLgvavlS 219 (292)
T COG5006 143 WSLDPVGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAA-QA-GPALFSPSLLPLALGVAVLS 219 (292)
T ss_pred CcCCHHHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhh-hc-chhhcChHHHHHHHHHHHHh
Confidence 334556788899999999999999998764 456677788888999999999 432 11 11123444455556679999
Q ss_pred -HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHH
Q 024756 85 -SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMI 150 (263)
Q Consensus 85 -~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll 150 (263)
.+.|.+-..++++.|...-+++.+++|.+.++.++++++|.++.. ||.++...+.+..=.
T Consensus 220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~ 280 (292)
T COG5006 220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGS 280 (292)
T ss_pred cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999 999999888877543
No 45
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.98 E-value=0.00045 Score=61.44 Aligned_cols=182 Identities=15% Similarity=0.145 Sum_probs=134.4
Q ss_pred HHHHHHHHHhcCCChHHHH--HHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCccee
Q 024756 26 LSVISKAALTKGMNKFVSV--VYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIYFTGLKFSSPTLS 103 (263)
Q Consensus 26 ~~~~~K~~~~~~~~p~~~~--~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~~~gl~~~~a~~a 103 (263)
+.+.-|.++.+.=-|..+. .++.....+.+......+--+.++++++..+...-..++.......--.++||.+...-
T Consensus 27 m~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~ 106 (314)
T KOG1444|consen 27 MTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMF 106 (314)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHH
Confidence 3455577776322233333 47887777766553222222235678887777777777776677777889999999999
Q ss_pred eeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcccccccchhHH
Q 024756 104 SAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLI 183 (263)
Q Consensus 104 sii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 183 (263)
+++=..+|+++++....+++.|++.+ .+.++....+|....... + .+. + ..
T Consensus 107 tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~---d-----------------~sf--~-~~ 157 (314)
T KOG1444|consen 107 TVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT---D-----------------LSF--N-LR 157 (314)
T ss_pred HHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc---c-----------------cee--c-ch
Confidence 99999999999999999999888888 999999999998876541 1 011 1 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHHhcC
Q 024756 184 GGLLLVLVCISSAIWNVAQAATIRGYP-EEMTVVFFYTFFITIQALCFSVIVEN 236 (263)
Q Consensus 184 G~~~~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~~~~ 236 (263)
|..+++...++-+.+.+..|+..+... +.+..+++..+.....+.....+.++
T Consensus 158 gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge 211 (314)
T KOG1444|consen 158 GYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGE 211 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcc
Confidence 899999999999999999998766442 46677888888888888888877665
No 46
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=97.93 E-value=0.00018 Score=62.84 Aligned_cols=187 Identities=17% Similarity=0.212 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHh---cCC----ChHHHHHHHHHHHHHHHHH-HHHHhhcCCC---------------CCCHHHHHHHHH
Q 024756 23 DVGLSVISKAALT---KGM----NKFVSVVYYNALGTLILLP-YFLFRRNKGA---------------SLTWSLIWRFFL 79 (263)
Q Consensus 23 wg~~~~~~K~~~~---~~~----~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~---------------~~~~~~~~~~~l 79 (263)
=+.+.+.+|.+-+ .+. +|+.....-|+-=.+++.. ..+++|...+ +.+... ...
T Consensus 15 Gs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l---fl~ 91 (372)
T KOG3912|consen 15 GSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL---FLP 91 (372)
T ss_pred ccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce---ecC
Confidence 3567777887532 122 3666666666666677777 5555442221 112111 111
Q ss_pred HHHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCcccc
Q 024756 80 LGLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLL 159 (263)
Q Consensus 80 ~g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~ 159 (263)
=+++...+..+.|.|+.+|+++.---+-...-+|+.+++.-+++.+++.+ ||+|+.....|++++... +..
T Consensus 92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~---d~~ 162 (372)
T KOG3912|consen 92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSL---DVH 162 (372)
T ss_pred hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeee---ecc
Confidence 24444667788899999998886655666667889999999999999999 999999999999887531 111
Q ss_pred ccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHH
Q 024756 160 MASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYP-EEMTVVFFYTFFITIQALCFS 231 (263)
Q Consensus 160 ~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l~~~ 231 (263)
. ..|+. ..-++...|+++++.+=+.-|+..+.-+|..++.. +|.....|+.++|.+.+...+
T Consensus 163 ~---~~~p~-------~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~ 225 (372)
T KOG3912|consen 163 L---VTDPY-------TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLA 225 (372)
T ss_pred c---ccCCc-------cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHH
Confidence 1 01110 01134568999999999999999999998877653 699999999999965554443
No 47
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=97.90 E-value=2.4e-05 Score=65.06 Aligned_cols=101 Identities=23% Similarity=0.250 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCcccccc
Q 024756 82 LIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMA 161 (263)
Q Consensus 82 ~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~ 161 (263)
++-..+++.|..++++.+++.++.+......|+.+++++.+++|+... ++++.++++.|++++...++.
T Consensus 61 i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~DN~----- 129 (290)
T KOG4314|consen 61 IFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYADNE----- 129 (290)
T ss_pred EEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEeccch-----
Confidence 344678899999999999999999999999999999999999999999 999999999999988642221
Q ss_pred CCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 024756 162 SSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGY 209 (263)
Q Consensus 162 ~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~ 209 (263)
..+...|..++..+++.-|+|-++-|+...+.
T Consensus 130 ----------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA 161 (290)
T KOG4314|consen 130 ----------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNA 161 (290)
T ss_pred ----------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 22446899999999999999999999987655
No 48
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.77 E-value=0.00048 Score=61.68 Aligned_cols=135 Identities=21% Similarity=0.254 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHH-HHH--HhhcCC----CCCCHHHHHHHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALT-KGMNKFVSVVYYNALGTLILLP-YFL--FRRNKG----ASLTWSLIWRFFLLGLI 83 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~-~~~~p~~~~~~R~~~a~l~ll~-~~~--~~~~~~----~~~~~~~~~~~~l~g~l 83 (263)
|+.+++++.++-|...+.-+...+ .+.++.+..++-..++.+..++ ... ...-.. .......+..+.+..+.
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 889999999999999999999884 5689999999999999998887 554 111000 00112244455556666
Q ss_pred HHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 84 GSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 84 ~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
+...+.+.+.-.++.++...+++..+--.++.+++..+++|+++.. +|+|+++.+.|..+=..
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~------~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPL------QWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChH------HHHHHHHhHHHHHHHHH
Confidence 6777777788899999999999999999999999999999999999 99999999999987553
No 49
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.71 E-value=0.0046 Score=54.37 Aligned_cols=142 Identities=20% Similarity=0.147 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCcceeeecc-chhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHH
Q 024756 71 WSLIWRFFLLGLIGSSGQIIYFTGLKFSSPTLSSAMA-NLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFM 149 (263)
Q Consensus 71 ~~~~~~~~l~g~l~~~~~~~~~~gl~~~~a~~asii~-~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~l 149 (263)
.+.+..-++.|++-..++..++.+.++.+.+.+.=+. ...=+.+.+.++++|+|.-+.+.+ ..-..++++.++|+.+
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~l 119 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVIL 119 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHH
Confidence 3677777788888899999999999999999998665 455567888999999999887721 0113366777778877
Q ss_pred HHhhcCccccccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHH
Q 024756 150 ITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALC 229 (263)
Q Consensus 150 l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~ 229 (263)
... +++. + ++.+...+...|....+++++.|..|.++.|. .+. ++.....=|.+--.+...+
T Consensus 120 ts~-~~~~--------~------~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~-~~~~~~lPqaiGm~i~a~i 181 (269)
T PF06800_consen 120 TSY-QDKK--------S------DKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHV-SGWSAFLPQAIGMLIGAFI 181 (269)
T ss_pred hcc-cccc--------c------cccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCC-ChhHhHHHHHHHHHHHHHH
Confidence 654 2211 0 01111335567999999999999999999876 344 4666555444433333333
Q ss_pred HHH
Q 024756 230 FSV 232 (263)
Q Consensus 230 ~~~ 232 (263)
+..
T Consensus 182 ~~~ 184 (269)
T PF06800_consen 182 FNL 184 (269)
T ss_pred Hhh
Confidence 333
No 50
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.49 E-value=0.0013 Score=57.26 Aligned_cols=104 Identities=12% Similarity=0.069 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCC-CC-CCHHHHHHHHHHHHHHHHHHHHHH
Q 024756 15 AMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKG-AS-LTWSLIWRFFLLGLIGSSGQIIYF 92 (263)
Q Consensus 15 ~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-~~-~~~~~~~~~~l~g~l~~~~~~~~~ 92 (263)
..+.++++|+...+..|...+ .++.+...... ....+..+......... .. ...++|..++..|+....++.+++
T Consensus 150 ~~l~aa~~~a~~~i~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~i~~~l~~ 226 (256)
T TIGR00688 150 EALVLAFSFTAYGLIRKALKN--TDLAGFCLETL-SLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLITGTPLLAFV 226 (256)
T ss_pred HHHHHHHHHHHHHHHHhhcCC--CCcchHHHHHH-HHHHHHHHHHHHhccCcccccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999998643 23333222221 11111111111111111 11 123578888888887788999999
Q ss_pred hhccccCcceeeeccchhHHHHHHHHHHH
Q 024756 93 TGLKFSSPTLSSAMANLIPIYTFLLAVIF 121 (263)
Q Consensus 93 ~gl~~~~a~~asii~~~~Pv~~~ila~l~ 121 (263)
+|+++.+++.++.+.+++|+++.+++.+.
T Consensus 227 ~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 227 IAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998753
No 51
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.43 E-value=0.0014 Score=57.54 Aligned_cols=133 Identities=20% Similarity=0.183 Sum_probs=91.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 024756 7 LQNTIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGS 85 (263)
Q Consensus 7 ~~~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~ 85 (263)
....|++..++++.+.|.....+.|.. +++|.....=+ .++.++-.. .....+ .+..+++.+ +-++.|++-.
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPq-aiGm~i~a~i~~~~~~--~~~~~k~~~-~nil~G~~w~ 206 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQ-AIGMLIGAFIFNLFSK--KPFFEKKSW-KNILTGLIWG 206 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHH-HHHHHHHHHHHhhccc--ccccccchH-HhhHHHHHHH
Confidence 345678999999999999988888863 57887776533 444443333 222111 111223333 3456788888
Q ss_pred HHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHH
Q 024756 86 SGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAF 148 (263)
Q Consensus 86 ~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ 148 (263)
.++.+++.+.+..+.+.+=.+..+..++..+.+.+++||+=++|++ ....+|+++.++|.+
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~--~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEM--IYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhH--HHHHHHHHHHHHhhh
Confidence 8999999999999999999999999999999999999999887721 113345555555543
No 52
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.40 E-value=0.0092 Score=54.44 Aligned_cols=175 Identities=17% Similarity=0.155 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH---HHHHhhc---CCCCCCHHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP---YFLFRRN---KGASLTWSLIWRFFLLGLI 83 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~---~~~~~~~---~~~~~~~~~~~~~~l~g~l 83 (263)
..++++.+++.++||+.++-.|. .. .-+ ++.-+.-..+-.-++.| ..+..+. .....+.+.+...++.|++
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k-~w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~ 82 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VK-KWS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGAL 82 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cC-CCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHH
Confidence 45889999999999999999998 33 223 22222211110111111 0110110 0112456677777778888
Q ss_pred HHHHHHHHHhhccccCcceeeec-cchhHHHHHHHHHHHhhccc---cccccCccccchhHHHHHHHHHHHHhhcCcccc
Q 024756 84 GSSGQIIYFTGLKFSSPTLSSAM-ANLIPIYTFLLAVIFRIEKL---DLRRSSSQAKTLGATVAVTGAFMITLYRGPLLL 159 (263)
Q Consensus 84 ~~~~~~~~~~gl~~~~a~~asii-~~~~Pv~~~ila~l~~~e~~---~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~ 159 (263)
-..++..++.++++.+.+.+.-+ ..+.-+...++..++++|-. +.+ ......+|+++.++|+++.... +...+
T Consensus 83 W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~A-g~~k~ 159 (345)
T PRK13499 83 WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGRA-GQLKE 159 (345)
T ss_pred HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHHh-hhhcc
Confidence 89999999999999999998866 56778888889888888755 322 1122678888999999887641 11000
Q ss_pred ccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 024756 160 MASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWN 199 (263)
Q Consensus 160 ~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~ 199 (263)
+++.+ +...+.+...|...++++.+.++.|.
T Consensus 160 ----~~~~~-----~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 160 ----RKMGI-----KKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred ----ccccc-----ccccccchHhHHHHHHHHHHHHHHHH
Confidence 00000 00123455689999999999999999
No 53
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.13 E-value=0.0013 Score=50.23 Aligned_cols=108 Identities=18% Similarity=0.182 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHHHhhc
Q 024756 17 VTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIG-SSGQIIYFTGL 95 (263)
Q Consensus 17 l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~~~~~~~gl 95 (263)
+++.++||.+.++.|.+.. +.++..-.. |..-.... .+ +++.+ ....+. -.+...|+..+
T Consensus 2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~~----Ll-----------~n~~y--~ipf~lNq~GSv~f~~~L 62 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIKF----LL-----------LNPKY--IIPFLLNQSGSVLFFLLL 62 (113)
T ss_pred eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHHH----HH-----------HhHHH--HHHHHHHHHHHHHHHHHH
Confidence 4678999999999999886 555544431 32211111 11 11122 223343 66778899999
Q ss_pred cccCcceeeecc-chhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHH
Q 024756 96 KFSSPTLSSAMA-NLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFM 149 (263)
Q Consensus 96 ~~~~a~~asii~-~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~l 149 (263)
.+.+.+.+.-+. ++.=++|++.++++.+|..+++ +++|..+.+.|+.+
T Consensus 63 ~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 63 GSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVAL 111 (113)
T ss_pred hcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeee
Confidence 999999999885 6677788888887777777777 89999999999865
No 54
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.10 E-value=0.02 Score=52.25 Aligned_cols=143 Identities=15% Similarity=0.100 Sum_probs=95.0
Q ss_pred hHHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCChHHHHHHHHH---HHHHHHH-H-HHHH-hh-cCC-----CCC
Q 024756 9 NTIPFVAMVTVECTDVGLS-------VISKAALTKGMNKFVSVVYYNA---LGTLILL-P-YFLF-RR-NKG-----ASL 69 (263)
Q Consensus 9 ~~~~~~~~l~a~~~wg~~~-------~~~K~~~~~~~~p~~~~~~R~~---~a~l~ll-~-~~~~-~~-~~~-----~~~ 69 (263)
..|++..++++.+.++... +..+.+.+.+.++.....-.++ ++..+.- . +.++ +| ++. .+-
T Consensus 172 ~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~ 251 (345)
T PRK13499 172 LKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSL 251 (345)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccc
Confidence 3689999999999988877 5565544446777665555554 4444433 2 3322 12 111 111
Q ss_pred C----HHHHHHHHHHHHHHHHHHHHHHhhccccCcceeee---cc-chhHHHHHHHHHHHhhccccccccCccccchhHH
Q 024756 70 T----WSLIWRFFLLGLIGSSGQIIYFTGLKFSSPTLSSA---MA-NLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGAT 141 (263)
Q Consensus 70 ~----~~~~~~~~l~g~l~~~~~~~~~~gl~~~~a~~asi---i~-~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~ 141 (263)
+ .+.....++.|++-+..+.+|..|.+..+...+.+ +. .+.-++..+.+. ++||+=+..||..+..++|++
T Consensus 252 ~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~v 330 (345)
T PRK13499 252 AKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCV 330 (345)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHH
Confidence 2 23334446667777888999999999887766665 55 444466666666 699999977777788899999
Q ss_pred HHHHHHHHHHh
Q 024756 142 VAVTGAFMITL 152 (263)
Q Consensus 142 l~~~G~~ll~~ 152 (263)
+.+.|.+++..
T Consensus 331 liI~g~~lig~ 341 (345)
T PRK13499 331 VIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHhh
Confidence 99999988864
No 55
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=96.97 E-value=0.016 Score=51.17 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHHHHhh
Q 024756 18 TVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNK--GASLTWSLIWRFFLLGLIGSSGQIIYFTG 94 (263)
Q Consensus 18 ~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~--~~~~~~~~~~~~~l~g~l~~~~~~~~~~g 94 (263)
.-++.||.....=|.. .+|+.+-...-...-.+.-+. ........ ....+.+.+..+...|+.......+|..|
T Consensus 155 ~la~sf~~Ygl~RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~a 231 (293)
T COG2962 155 ALALSFGLYGLLRKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAA 231 (293)
T ss_pred HHHHHHHHHHHHHHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHH
Confidence 3345566666555543 477777666666555554444 22222111 11134567888889999999999999999
Q ss_pred ccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 95 LKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 95 l~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
-+++|-+.-+.++|.+|.+..++++++++|+++.. |.++-+..-.|+++...
T Consensus 232 a~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~------~~~~F~~IW~aL~l~~~ 283 (293)
T COG2962 232 AKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSD------QLVTFAFIWLALALFSI 283 (293)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999888754
No 56
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.97 E-value=0.0065 Score=46.22 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=52.4
Q ss_pred HHHHHHHHhhccccCcceeeec-cchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHH
Q 024756 85 SSGQIIYFTGLKFSSPTLSSAM-ANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMI 150 (263)
Q Consensus 85 ~~~~~~~~~gl~~~~a~~asii-~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll 150 (263)
..++.+...++|+.|.+.|=.+ ...--+.+.+.++++++|++++. |++|+.+.+.|++.+
T Consensus 46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 7788889999999999877544 45667788899999999999999 999999999999886
No 57
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.90 E-value=0.0078 Score=47.77 Aligned_cols=128 Identities=17% Similarity=0.213 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 024756 14 VAMVTVECTDVGLSVISKAALTKGM-NKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIY 91 (263)
Q Consensus 14 ~~~l~a~~~wg~~~~~~K~~~~~~~-~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~ 91 (263)
+..+++..+-+....+--..-+ .. +|...++..+..+.+++.. ....++......+ +.-.+..+-|+++.....+.
T Consensus 4 lla~~aG~~i~~q~~~N~~L~~-~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG~~~V~~~ 81 (138)
T PF04657_consen 4 LLALLAGALIALQAAFNGQLGK-ALGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLGVFFVLSN 81 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHHHHHHHHH
Confidence 3445555555555444444333 34 5999999999999999888 6554442221111 11223445788888888899
Q ss_pred HhhccccCcceeeeccch-hHHHHHHHHHH----HhhccccccccCccccchhHHHHHHHHHH
Q 024756 92 FTGLKFSSPTLSSAMANL-IPIYTFLLAVI----FRIEKLDLRRSSSQAKTLGATVAVTGAFM 149 (263)
Q Consensus 92 ~~gl~~~~a~~asii~~~-~Pv~~~ila~l----~~~e~~~~~~~~~~~~~~g~~l~~~G~~l 149 (263)
...+++.+++.+.++.-+ .=+...+++++ .-+++++.+ |++|+++.++|+.+
T Consensus 82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 999999999988877543 55566677764 245777778 99999999999864
No 58
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.87 E-value=0.0026 Score=48.48 Aligned_cols=66 Identities=20% Similarity=0.276 Sum_probs=55.6
Q ss_pred HHHH-HHHHHHHHhhccccCcceeeec-cchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 81 GLIG-SSGQIIYFTGLKFSSPTLSSAM-ANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 81 g~l~-~~~~~~~~~gl~~~~a~~asii-~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
.+.+ .+++.++..++++.|.+.|=.+ ...--+.+.+.++++++|++++. +++|+.+.++|++++..
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence 3444 7788888999999998877655 45667788999999999999999 99999999999999854
No 59
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.86 E-value=0.00039 Score=60.47 Aligned_cols=133 Identities=19% Similarity=0.235 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQII 90 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~ 90 (263)
+-...+.+.+.-+...++.|+.-. ..+......+--+++.+.-++ +..-..-.. +..+|+|....-+|+++++++++
T Consensus 192 gt~aai~s~lf~asvyIilR~iGk-~~h~~msvsyf~~i~lV~s~I~~~~ig~~~l-P~cgkdr~l~~~lGvfgfigQIl 269 (346)
T KOG4510|consen 192 GTVAAISSVLFGASVYIILRYIGK-NAHAIMSVSYFSLITLVVSLIGCASIGAVQL-PHCGKDRWLFVNLGVFGFIGQIL 269 (346)
T ss_pred chHHHHHhHhhhhhHHHHHHHhhc-cccEEEEehHHHHHHHHHHHHHHhhccceec-CccccceEEEEEehhhhhHHHHH
Confidence 345566666677777788887533 677776666666666666555 432222122 34667888888899999999999
Q ss_pred HHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 91 YFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 91 ~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
...|+|.--++..+++.++--+++.+...++++|-+++. .|.|.++.+...+....
T Consensus 270 lTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~w------s~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 270 LTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIW------SWVGAVMVVSSTVWVAL 325 (346)
T ss_pred HHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHH------HhhceeeeehhHHHHHH
Confidence 999999999999999999999999999999999999999 99999998888877764
No 60
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.82 E-value=0.0025 Score=49.39 Aligned_cols=66 Identities=24% Similarity=0.234 Sum_probs=56.6
Q ss_pred HHHH-HHHHHHHHhhccccCcceeeec-cchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 81 GLIG-SSGQIIYFTGLKFSSPTLSSAM-ANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 81 g~l~-~~~~~~~~~gl~~~~a~~asii-~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
.+.+ ..++.++..++++.|.+.|=.+ ...--+.+.+.++++++|+++.. +++|+.+.++|++.+-.
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence 4444 7888999999999999887655 35677888999999999999999 99999999999988854
No 61
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.80 E-value=0.0042 Score=55.96 Aligned_cols=137 Identities=17% Similarity=0.205 Sum_probs=105.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCChHHHHHHHHHHHHHHHH-H-HHHHhhcCC-----CCCCHHHHHHH
Q 024756 8 QNTIPFVAMVTVECTDVGLSVISKAAL---TKGMNKFVSVVYYNALGTLILL-P-YFLFRRNKG-----ASLTWSLIWRF 77 (263)
Q Consensus 8 ~~~~~~~~~l~a~~~wg~~~~~~K~~~---~~~~~p~~~~~~R~~~a~l~ll-~-~~~~~~~~~-----~~~~~~~~~~~ 77 (263)
-|+.|.+....+.+..+.-.++.|..+ +...|+..+..+.--++...++ | ....+.... ...+...+..
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL- 238 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH-
Confidence 367899999999999999999999988 3358999999999999999999 7 544332111 1233333332
Q ss_pred HHHHHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 78 FLLGLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 78 ~l~g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
.+..++..+.+..-|..+++++|.+=++....==+++...++++++|+++.. +..|..+++.|+.+=.
T Consensus 239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHH
Confidence 2334555778888999999999988887776655667778888999999999 9999999999998754
No 62
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=96.67 E-value=0.014 Score=53.20 Aligned_cols=136 Identities=11% Similarity=0.157 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHH-HHHHhhcCCC---CCCHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTK---GMNKFVSVVYYNALGTLILLP-YFLFRRNKGA---SLTWSLIWRFFLLGL 82 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~---~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~---~~~~~~~~~~~l~g~ 82 (263)
..|.++.+++++.||...++.|.-.++ ..|...+-.+--++..++++| .++..+-..+ -++..+...++..++
T Consensus 246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~l 325 (416)
T KOG2765|consen 246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNL 325 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhH
Confidence 568899999999999999999987753 356777777778888888887 5543221111 123344555667788
Q ss_pred HH-HHHHHHHHhhccccCcceeeeccc-hhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 83 IG-SSGQIIYFTGLKFSSPTLSSAMAN-LIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 83 l~-~~~~~~~~~gl~~~~a~~asii~~-~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
++ ..+-++|.+|+-.+++..+++=+. +.|+ .++...++.+.++++. .++|.+..++|.+++..
T Consensus 326 igtvvSDylW~~a~~lTs~Lv~TlgmSltIPL-A~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 326 IGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPL-AMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI 390 (416)
T ss_pred HHHHHHHHHHHHHHHhccchhheeeeeEeeeH-HHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence 88 999999999999999988887655 4554 5577888888888988 99999999999988864
No 63
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.64 E-value=0.0031 Score=47.49 Aligned_cols=62 Identities=23% Similarity=0.215 Sum_probs=54.4
Q ss_pred HHHHHHHHhhccccCcceeeec-cchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 85 SSGQIIYFTGLKFSSPTLSSAM-ANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 85 ~~~~~~~~~gl~~~~a~~asii-~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
..++.+.-.++|+.|.+.|=.+ ...--+.+.+.++++++|+++.. +++|+.+.++|++.+-.
T Consensus 41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhhh
Confidence 7788899999999999887544 56777889999999999999999 99999999999988753
No 64
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.59 E-value=0.0052 Score=46.47 Aligned_cols=64 Identities=9% Similarity=0.067 Sum_probs=55.0
Q ss_pred HHH-HHHHHHHHhhccccCcceeeec-cchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 82 LIG-SSGQIIYFTGLKFSSPTLSSAM-ANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 82 ~l~-~~~~~~~~~gl~~~~a~~asii-~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
+.+ ..++.+...++|+.|.+.|=.+ ...--+.+.+.+.++++|++++. |++|+.+.++|++.+.
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence 444 7788899999999999877544 45777888999999999999999 9999999999999874
No 65
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.46 E-value=0.0041 Score=45.91 Aligned_cols=56 Identities=23% Similarity=0.218 Sum_probs=33.8
Q ss_pred HHHH-HHHHHHHHhhccccCccee-eeccchhHHHHHHHHHHHhhccccccccCccccchhHHH
Q 024756 81 GLIG-SSGQIIYFTGLKFSSPTLS-SAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATV 142 (263)
Q Consensus 81 g~l~-~~~~~~~~~gl~~~~a~~a-sii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l 142 (263)
.+.+ ..++.++..++|+.|.+.+ ++......+.+.+.+.++++|+++.+ |++|+.+
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l 92 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence 3434 7788999999999999998 45567888999999999999999999 9999875
No 66
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.17 E-value=0.068 Score=46.97 Aligned_cols=121 Identities=12% Similarity=0.046 Sum_probs=89.5
Q ss_pred HHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCC
Q 024756 90 IYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPD 169 (263)
Q Consensus 90 ~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~ 169 (263)
+-..+++|.+.+.=-+=-.++-+|+.+++..++|||-+.. -..+..+.+.|.-+=+ | +
T Consensus 118 fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGv--d----------q---- 175 (347)
T KOG1442|consen 118 FNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGV--D----------Q---- 175 (347)
T ss_pred ccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheehheecc--c----------c----
Confidence 3457788888877666677888999999999999999988 6666666555543321 0 0
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHHhcC
Q 024756 170 HPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYP-EEMTVVFFYTFFITIQALCFSVIVEN 236 (263)
Q Consensus 170 ~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~~~~ 236 (263)
++..+.-...|.++...|+++=|+..+..||...... -....+.+....+.+++++...+.++
T Consensus 176 ----E~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge 239 (347)
T KOG1442|consen 176 ----EGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGE 239 (347)
T ss_pred ----ccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcch
Confidence 1122223347999999999999999999998654442 36778899999999999988877654
No 67
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.10 E-value=0.02 Score=49.20 Aligned_cols=73 Identities=21% Similarity=0.325 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 73 LIWRFFLLGLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 73 ~~~~~~l~g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
.+..+.+.++.+.+++.+-|.-+.+-+|-..++++.+--+|+++.++++++++++.+ ||+|.++.+.|...=.
T Consensus 240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADV 312 (337)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHh
Confidence 455667778888889999999999999999999999999999999999999999999 9999999999986544
No 68
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.74 E-value=0.079 Score=45.61 Aligned_cols=134 Identities=14% Similarity=0.143 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccc
Q 024756 81 GLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLM 160 (263)
Q Consensus 81 g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~ 160 (263)
+.-.-+++..-+.++|+.+=-...+=-+.-|+=+.++++++.|++-.++ +...+++.+.|+.+....++....
T Consensus 92 s~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~------kY~cVL~IV~GValFmYK~~Kv~g- 164 (337)
T KOG1580|consen 92 SASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWR------KYCCVLMIVVGVALFMYKENKVGG- 164 (337)
T ss_pred HHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHH------HHHHHHHHHHHHHHhhccccccCC-
Confidence 3333667778899999998776666678889989999999999999999 999999999999886432232211
Q ss_pred cCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHHhcC
Q 024756 161 ASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYP-EEMTVVFFYTFFITIQALCFSVIVEN 236 (263)
Q Consensus 161 ~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~~~~ 236 (263)
..+.....|+++.+++-..=++-...+.|+.+++. ...+++.+..+.+++.+..-.++.++
T Consensus 165 ---------------~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE 226 (337)
T KOG1580|consen 165 ---------------AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE 226 (337)
T ss_pred ---------------CcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh
Confidence 11223346999999998888888889988877652 35667777777777766554444433
No 69
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=95.54 E-value=0.043 Score=49.25 Aligned_cols=116 Identities=21% Similarity=0.290 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIG-SSGQ 88 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~~ 88 (263)
..|....+.++++.+....+-|+...+ .+. .. .+++ ..++.-.++ ...+.|++. ..+.
T Consensus 6 ~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~--------------~~~~-~~~~~~l~~--~~W~~G~~~~~~g~ 64 (300)
T PF05653_consen 6 YIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GS--------------LRAG-SGGRSYLRR--PLWWIGLLLMVLGE 64 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---cc--------------cccc-chhhHHHhh--HHHHHHHHHHhcch
Confidence 457777788888888888888876431 110 00 0000 000000111 123345555 6677
Q ss_pred HHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 89 IIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 89 ~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
..-+.++.+.|++..+=+..+.=++..+++..++|||++++ .+.|..+++.|..++..
T Consensus 65 ~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 65 ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVI 122 (300)
T ss_pred HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEE
Confidence 78888999999988887777888899999999999999999 99999999999987764
No 70
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=95.23 E-value=0.0074 Score=52.05 Aligned_cols=171 Identities=15% Similarity=0.137 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIY 91 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~ 91 (263)
.++..++=++.||+...+.... +-+|.+-+..-.+-|.++-+..++.. .|..+.+.+..-++.|.+-..++...
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~---~p~~T~~~~iv~~isG~~Ws~GQ~~Q 76 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFV---SPELTLTIFIVGFISGAFWSFGQANQ 76 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheee---cCccchhhHHHHHHhhhHhhhhhhhh
Confidence 3566778889999988777653 33566655554444444443433322 24456777776677788888899999
Q ss_pred HhhccccCcceeeec-cchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCC
Q 024756 92 FTGLKFSSPTLSSAM-ANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDH 170 (263)
Q Consensus 92 ~~gl~~~~a~~asii-~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~ 170 (263)
+.++++.+.++|.=+ +.+.=+-+.+.+++.+||..+.. + .++++..++++.. |--.. |.+|..++
T Consensus 77 fka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~------~---~IlG~iAlilivi--G~~lT---s~~~~~nk 142 (288)
T COG4975 77 FKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPT------Q---IILGFIALILIVI--GIYLT---SKQDRNNK 142 (288)
T ss_pred hhheeeeeeeccccccchhhHhhceeeeEEEEeccCcch------h---HHHHHHHHHHHHH--hheEe---eeeccccc
Confidence 999999999999866 45677788888999999987766 3 3444444444432 11111 11111101
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 024756 171 PKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAAT 205 (263)
Q Consensus 171 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~ 205 (263)
+.+...+...|....+.+.+.|-.|.++.+..
T Consensus 143 ---~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f 174 (288)
T COG4975 143 ---EEENPSNLKKGIVILLISTLGYVGYVVLFQLF 174 (288)
T ss_pred ---cccChHhhhhheeeeeeeccceeeeEeeeccc
Confidence 11223345578888888999999998887654
No 71
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=94.94 E-value=0.2 Score=43.91 Aligned_cols=188 Identities=11% Similarity=-0.035 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQII 90 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~ 90 (263)
|+++.+++.+++|++++=.|.. + .-|++.+-++....-.+.-+. ..+ + ..++. .....+-|.+-+.++.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~-~gDg~~fQw~~~~~i~~~g~~v~~~-~--~~p~f----~p~amlgG~lW~~gN~~ 71 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-D-TGDGFFFQWVMCSGIFLVGLVVNLI-L--GFPPF----YPWAMLGGALWATGNIL 71 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-c-CCCcHHHHHHHHHHHHHHHHHHHHh-c--CCCcc----eeHHHhhhhhhhcCcee
Confidence 3567789999999999999974 4 457755544443333332222 222 1 12222 12334556666778888
Q ss_pred HHhhccccCcceeeeccch-hHHHHHHHHHH-HhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCC-C
Q 024756 91 YFTGLKFSSPTLSSAMANL-IPIYTFLLAVI-FRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSD-S 167 (263)
Q Consensus 91 ~~~gl~~~~a~~asii~~~-~Pv~~~ila~l-~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~-~ 167 (263)
-.-.++..+.+.+-.+-++ .-+.-...+.+ +|+++.+.. +......+|++++++|..+..+-+.+......+.++ +
T Consensus 72 ~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~ 150 (254)
T PF07857_consen 72 VVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETP 150 (254)
T ss_pred ehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCccccccccc
Confidence 8888999998888888664 44444455544 454444333 223447899999999987765433222110000000 0
Q ss_pred C--------CCC----ccccccc-----chhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 024756 168 P--------DHP----KLLFSQQ-----SEWLIGGLLLVLVCISSAIWNVAQAATIRGY 209 (263)
Q Consensus 168 ~--------~~~----~~~~~~~-----~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~ 209 (263)
. +.+ .++...+ .+...|..+++.+.+.|+...+=.....++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 151 LSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred cccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 0 001 0011111 1357899999999999999988777765554
No 72
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.90 E-value=0.73 Score=41.16 Aligned_cols=169 Identities=16% Similarity=0.199 Sum_probs=109.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCcceeeeccc--hhHHHHHH
Q 024756 39 NKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIYFTGLKFSSPTLSSAMAN--LIPIYTFL 116 (263)
Q Consensus 39 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~~~gl~~~~a~~asii~~--~~Pv~~~i 116 (263)
++..+++.+-+.+.++-..+...++++ ...++.|......++-..+...+.|.+++|.+==.-.+==+ ..| +++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIP--Vml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIP--VML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhH--HHH
Confidence 455666666666655544422112222 22334566677788888889999999999975322111112 344 456
Q ss_pred HHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHH
Q 024756 117 LAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSA 196 (263)
Q Consensus 117 la~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a 196 (263)
++.++.+.|.+.+ +.+...+.-.|+.+....++.+ | ...++..+..+|..++...-+.=+
T Consensus 126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~-----s---------~~~~g~~ns~~G~~Ll~~~L~fDg 185 (327)
T KOG1581|consen 126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD-----S---------SSKSGRENSPIGILLLFGYLLFDG 185 (327)
T ss_pred HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC-----C---------ccccCCCCchHhHHHHHHHHHHHh
Confidence 7788999999999 8888888888886655422211 0 012233355689999888888888
Q ss_pred HHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHH
Q 024756 197 IWNVAQAATIRGYP-EEMTVVFFYTFFITIQALCFS 231 (263)
Q Consensus 197 ~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l~~~ 231 (263)
+-+..++++-++.. .+..+++...+++.+....-.
T Consensus 186 fTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~l 221 (327)
T KOG1581|consen 186 FTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYL 221 (327)
T ss_pred hHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhh
Confidence 88888888877553 578888888888888776653
No 73
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.90 E-value=0.048 Score=46.36 Aligned_cols=61 Identities=21% Similarity=0.220 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHH
Q 024756 82 LIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAF 148 (263)
Q Consensus 82 ~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ 148 (263)
+.......+..+.+++.++..-+....+.++++.+++.++++|+++.. ++.|+.+.+.|+.
T Consensus 160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~ 220 (222)
T TIGR00803 160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATF 220 (222)
T ss_pred HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeE
Confidence 334667778899999999999999999999999999999999999999 9999999988864
No 74
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.11 E-value=0.36 Score=43.05 Aligned_cols=136 Identities=12% Similarity=0.139 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC-----CCCHHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALT-KGMNKFVSVVYYNALGTLILLPYFLFRRNKGA-----SLTWSLIWRFFLLGLI 83 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-----~~~~~~~~~~~l~g~l 83 (263)
..|+..+....++-|.+...-+.... ..+++.++...-.++.++.-....+......+ +.+.+.+..+.+....
T Consensus 171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~ 250 (327)
T KOG1581|consen 171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTC 250 (327)
T ss_pred hHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHh
Confidence 35777777777777777776666664 35889999888888888776552221111111 1234556677788888
Q ss_pred HHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 84 GSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 84 ~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
+..++.+-|.-++.-++-.-+.++.+-=.+..+++.+.++++++.. ||.|+.+.+.|..+=.
T Consensus 251 gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~ 312 (327)
T KOG1581|consen 251 GAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEI 312 (327)
T ss_pred hhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHH
Confidence 8889999999999888888888888889999999999999999999 9999999999986644
No 75
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=94.05 E-value=0.083 Score=39.72 Aligned_cols=62 Identities=13% Similarity=0.158 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHhcCCc-ccceeccCchhhhhhhHhhcc
Q 024756 193 ISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIVENDI-DAWKLTTGVEIMAIVCTVRTH 259 (263)
Q Consensus 193 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-~~~~~~~~~~~~~l~y~g~~~ 259 (263)
++|+.+.+..|+..++. ++...+.+.+..+++ +++.....+... ..++ ...+..+.+.|.++
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 63 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKPFKNLS---PRQWLWLLFLGLLG 63 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhccccccCCC---hhhhhhhhHhhccc
Confidence 47999999999999998 599999999999998 666665554432 1111 12355555555553
No 76
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.91 E-value=0.55 Score=37.69 Aligned_cols=135 Identities=14% Similarity=0.114 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQ 88 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~ 88 (263)
....+..+.+..+-.....+--+..+..=+|+...+..+..+..++.. ....++........+...+...-|+++...-
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~v 83 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFV 83 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhh
Confidence 344555566666655555544443331225999999999999999888 6553322111111222233445577766555
Q ss_pred HHHHhhccccCcceeeec-cchhHHHHHHHHHH-Hhh---ccccccccCccccchhHHHHHHHHHHH
Q 024756 89 IIYFTGLKFSSPTLSSAM-ANLIPIYTFLLAVI-FRI---EKLDLRRSSSQAKTLGATVAVTGAFMI 150 (263)
Q Consensus 89 ~~~~~gl~~~~a~~asii-~~~~Pv~~~ila~l-~~~---e~~~~~~~~~~~~~~g~~l~~~G~~ll 150 (263)
..-.....+.+++....+ ..-.=+...+++.+ +++ .+++.. ++.|+++.++|++++
T Consensus 84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~ 144 (150)
T COG3238 84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA 144 (150)
T ss_pred hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence 556666667666655444 33344555556654 232 445555 999999999995443
No 77
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=93.07 E-value=2.1 Score=38.46 Aligned_cols=135 Identities=20% Similarity=0.175 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC----CChHHHHHHHHHHHHHHHHH-HHHHhhcCC-----------CCCCHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKG----MNKFVSVVYYNALGTLILLP-YFLFRRNKG-----------ASLTWSL 73 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~----~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~-----------~~~~~~~ 73 (263)
..|+.....+.++=|.-|.+++..+.++ -+|++....-.-.-.+.++| .+..++... +....+.
T Consensus 163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv 242 (349)
T KOG1443|consen 163 IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRV 242 (349)
T ss_pred ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHH
Confidence 4578888889999999999999888632 24666666655555566666 444443211 0011233
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHH
Q 024756 74 IWRFFLLGLIGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMI 150 (263)
Q Consensus 74 ~~~~~l~g~l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll 150 (263)
...+.+.|.+.+.--..-+.=+..|+.-..++..-.-=+.+.+++..+.+|+++.. .+.|..++..|+..=
T Consensus 243 ~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l------N~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 243 IGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL------NWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh------HHHHHHHHHHHHHHh
Confidence 33444444444333333445556666666666666667888999999999999999 999999999999774
No 78
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.72 E-value=0.032 Score=49.93 Aligned_cols=119 Identities=23% Similarity=0.327 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIG-SSGQ 88 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~-~~~~ 88 (263)
..+.+..+.+.++.|+++++-|....+ ... - -.|........- +. .....|++. ..+-
T Consensus 20 ~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~------~-~~ra~~gg~~yl-~~--~~Ww~G~ltm~vGe 78 (335)
T KOG2922|consen 20 IIGLVLAISSSIFIGSSFILKKKGLKR-----------AGA------S-GLRAGEGGYGYL-KE--PLWWAGMLTMIVGE 78 (335)
T ss_pred eeeeeehhhccEEEeeehhhhHHHHHH-----------Hhh------h-cccccCCCcchh-hh--HHHHHHHHHHHHHh
Confidence 345566777777788888888876431 100 0 001000001111 12 233456666 6677
Q ss_pred HHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCc
Q 024756 89 IIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGP 156 (263)
Q Consensus 89 ~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~ 156 (263)
..-|.++.+.|++..+-+..+.-+..++++..+++||++.. -.+|.+++++|..+++. +.|
T Consensus 79 i~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~-haP 139 (335)
T KOG2922|consen 79 IANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVI-HAP 139 (335)
T ss_pred HhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEE-ecC
Confidence 77778888888888888889999999999999999999999 99999999999988875 444
No 79
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.62 E-value=1.3 Score=39.67 Aligned_cols=135 Identities=19% Similarity=0.195 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHH-HHHHhhc-----CCCC-CCHHHHHHHHHHHH
Q 024756 11 IPFVAMVTVECTDVGLSVISKAALT-KGMNKFVSVVYYNALGTLILLP-YFLFRRN-----KGAS-LTWSLIWRFFLLGL 82 (263)
Q Consensus 11 ~~~~~~l~a~~~wg~~~~~~K~~~~-~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~-----~~~~-~~~~~~~~~~l~g~ 82 (263)
.|+.++....+.=....+..|...+ .+.+-+.+..+..+++.+.+.. .++.... +.+. ...+.+..+.+-++
T Consensus 157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv 236 (314)
T KOG1444|consen 157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV 236 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence 4677877777777788888888775 3567788899999998888777 4443210 0111 11234455666677
Q ss_pred HHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 83 IGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 83 l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
++..-.++-+++.+..|++.-++.....=..+.+...++.+++.++. ..+|+.+++.|-++=.
T Consensus 237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHh
Confidence 77777778889999999999888885555666666666788999999 9999999999987754
No 80
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=91.72 E-value=1.4 Score=37.80 Aligned_cols=125 Identities=18% Similarity=0.173 Sum_probs=93.8
Q ss_pred HHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCC
Q 024756 91 YFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDH 170 (263)
Q Consensus 91 ~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~ 170 (263)
--.++||.+...=+++-+++-+.++.....+|+.|++.. ...+.++.+...+.... ++. +
T Consensus 85 ~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w--~D~-q----------- 144 (309)
T COG5070 85 SSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATW--GDQ-Q----------- 144 (309)
T ss_pred cccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhcc--chh-h-----------
Confidence 357888988888888888888899999999999999999 88888888777766543 110 0
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHHhcCC
Q 024756 171 PKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRGYP-EEMTVVFFYTFFITIQALCFSVIVEND 237 (263)
Q Consensus 171 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~~~~~ 237 (263)
....-....+.|.+++...++.-+.|....|+..+-.. ..+..++|..+.+...++.+..+.|+.
T Consensus 145 --~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edw 210 (309)
T COG5070 145 --ASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDW 210 (309)
T ss_pred --HHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccC
Confidence 00000112235899999999999999999988655221 357788999999999999999888764
No 81
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=91.10 E-value=0.99 Score=35.50 Aligned_cols=54 Identities=17% Similarity=0.237 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh------CCchHHHHHHHHHHHHHHHHHHHHHhcCC
Q 024756 184 GGLLLVLVCISSAIWNVAQAATIRG------YPEEMTVVFFYTFFITIQALCFSVIVEND 237 (263)
Q Consensus 184 G~~~~l~aa~~~a~~~v~~k~~~~~------~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 237 (263)
|..+.+.|.++.|++.++.|+..++ ..++.....+....+.+.+++.+.+.|+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~ 60 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGP 60 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5788999999999999999997666 22689999999999999999998887764
No 82
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=88.03 E-value=3.5 Score=36.53 Aligned_cols=169 Identities=17% Similarity=0.083 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhcccc-CcceeeeccchhHHHHHHHH
Q 024756 41 FVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIYFTGLKFS-SPTLSSAMANLIPIYTFLLA 118 (263)
Q Consensus 41 ~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~~~gl~~~-~a~~asii~~~~Pv~~~ila 118 (263)
..+++.+|++-+.-=++ .--..+ .+++.+.|++.. .+.++ +..+.+-++++++- +--.=.++-+-.++.+.+++
T Consensus 34 NLITFaqFlFia~eGlif~skf~~-~k~kiplk~Y~i--~V~mF-F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g 109 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSKFFT-VKPKIPLKDYAI--TVAMF-FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILG 109 (330)
T ss_pred eehHHHHHHHHHHhceeeeccccc-cCCCCchhhhhe--ehhee-eeeeeeccceeeecccceEEEEEecCcHHHHHHHH
Confidence 55677777776554444 211111 124555555433 22222 33445556677664 44445566678899999999
Q ss_pred HHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHH
Q 024756 119 VIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIW 198 (263)
Q Consensus 119 ~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~ 198 (263)
+++.++|-+.+ |..++++.-+|+++-...+.++.+.-++.. +..+..+....+..|..+...|-+.-|.-
T Consensus 110 ~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l----~~~~~~~~~~~w~iGi~lL~~al~~sa~m 179 (330)
T KOG1583|consen 110 WILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRSKLSGL----DSGSAQSDFFWWLIGIALLVFALLLSAYM 179 (330)
T ss_pred HHhccceeehh------hhhhHHhhhhhheeEEeecCcchhhhhccc----ccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 999999999999887754333222100000 00011122345678998888888888888
Q ss_pred HHHHHHHhhhCC-chHHHHHHHHHHH
Q 024756 199 NVAQAATIRGYP-EEMTVVFFYTFFI 223 (263)
Q Consensus 199 ~v~~k~~~~~~~-~~~~~~~~~~~~~ 223 (263)
.+.++..-+++. ++-...++.=...
T Consensus 180 giyqE~~Y~kyGKh~~EalFytH~Ls 205 (330)
T KOG1583|consen 180 GIYQETTYQKYGKHWKEALFYTHFLS 205 (330)
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHhc
Confidence 888887777664 3455555444333
No 83
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=86.27 E-value=0.81 Score=39.78 Aligned_cols=134 Identities=18% Similarity=0.188 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIGSSGQI 89 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~ 89 (263)
.|++..++.+.+-|-...+..+..--++.+...--+.-++++++++.. + +..++.++..|+. ..-|++-+.++.
T Consensus 151 kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~~---~--~~~~~~~K~t~~n-ii~G~~Wa~GNl 224 (288)
T COG4975 151 KKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILGF---F--KMEKRFNKYTWLN-IIPGLIWAIGNL 224 (288)
T ss_pred hhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHhh---c--ccccchHHHHHHH-HhhHHHHHhhHH
Confidence 345555555555554333333321111344444444445555544322 1 1122345555554 455777788889
Q ss_pred HHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 90 IYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 90 ~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
+++.+-+..+.+.+=.+..+.-+...+-+.++++||-+++++ ...+.|+++.++|.+++.
T Consensus 225 ~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm--~~v~iGiilivvgai~lg 284 (288)
T COG4975 225 FMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEM--VYVIIGIILIVVGAILLG 284 (288)
T ss_pred HHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhh--hhhhhhHHHHHHHhhhhh
Confidence 999999988888777777777778888888899999999843 124566777777776653
No 84
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=86.09 E-value=13 Score=28.13 Aligned_cols=115 Identities=19% Similarity=0.238 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHH--HHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 024756 14 VAMVTVECTDVGLSVISKAALTKGMNKFVSV--VYYNALGTLILLPYFLFRRNKGASLTWSLIWRFFLLGLIGSSGQIIY 91 (263)
Q Consensus 14 ~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~--~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~~~~~~ 91 (263)
..++.+.++||.+.++.|.... +.+..--. -+|. ..++-+ ...++++.+.. + .+.-.+..+|
T Consensus 6 ~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~----------~lqe~~-tl~l~w~Y~iP-F---llNqcgSaly 69 (125)
T KOG4831|consen 6 DKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMI----------ALQEMK-TLFLNWEYLIP-F---LLNQCGSALY 69 (125)
T ss_pred HHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHH----------HHHHHH-HHHHhHHHHHH-H---HHHHhhHHHH
Confidence 4567889999999999998754 33221111 1111 111100 00122222221 1 1224566789
Q ss_pred HhhccccCcceeeeccc-hhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHH
Q 024756 92 FTGLKFSSPTLSSAMAN-LIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMI 150 (263)
Q Consensus 92 ~~gl~~~~a~~asii~~-~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll 150 (263)
|.-+++++-+.|.=+.+ +.=.++++.+..+..|-...+ .+.|..+.++|..+.
T Consensus 70 ~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 70 YLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhe
Confidence 99999999999997755 455588888886555555556 889999999887654
No 85
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=85.71 E-value=24 Score=32.22 Aligned_cols=179 Identities=16% Similarity=0.203 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhh-cC----CCCCCHHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRR-NK----GASLTWSLIWRFFLLGLI 83 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~-~~----~~~~~~~~~~~~~l~g~l 83 (263)
..++++..++.++=|+.++=.|..-+ =..+..+.-..+-.-++.| ..-.-. .+ -...+...+...++.|++
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk~---WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l 82 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVKG---WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL 82 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcCC---ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence 45778888888888888888887532 2344444444444445555 321111 00 012344566677778888
Q ss_pred HHHHHHHHHhhccccCcceeeec-cchhHHHHHHHHHHHhhcccc--ccccCccccchhHHHHHHHHHHHHhhcCccccc
Q 024756 84 GSSGQIIYFTGLKFSSPTLSSAM-ANLIPIYTFLLAVIFRIEKLD--LRRSSSQAKTLGATVAVTGAFMITLYRGPLLLM 160 (263)
Q Consensus 84 ~~~~~~~~~~gl~~~~a~~asii-~~~~Pv~~~ila~l~~~e~~~--~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~ 160 (263)
-++....|=.+++|++.+...-+ ..+.-++-.++--++.++ .+ ..+...+..++|++++++|+.+.... |...+-
T Consensus 83 WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~-~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A-G~~Ke~ 160 (344)
T PF06379_consen 83 WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGT-FDELLATPSGQIVLLGVAVCLIGIAICGKA-GSMKEK 160 (344)
T ss_pred HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCc-ccccccCCCchhhhhHHHHHHHHHHHHhHH-HHhhhh
Confidence 88888899999999987766544 444444444443333221 11 11123445899999999999887532 211000
Q ss_pred cCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 024756 161 ASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQA 203 (263)
Q Consensus 161 ~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k 203 (263)
+ +. +...+.+...|...++.|.+.-|.+++-..
T Consensus 161 ~--------~~--~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 161 E--------LG--EEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred h--------hc--cchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 0 00 112234556799999999998888887654
No 86
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=85.67 E-value=3.5 Score=36.66 Aligned_cols=135 Identities=16% Similarity=0.211 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChHHHHHHHHHHHHHHHH----H-HHHHhhcC---CCCCCHHHHHHHH--
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAAL-TKGMNKFVSVVYYNALGTLILL----P-YFLFRRNK---GASLTWSLIWRFF-- 78 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~-~~~~~p~~~~~~R~~~a~l~ll----~-~~~~~~~~---~~~~~~~~~~~~~-- 78 (263)
..|.++++.+.++-+.-.+.=..-+ .++++|.+.+.+.-.++.+++- | .++.-.+. .++-.+.||...+
T Consensus 175 itGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~ 254 (372)
T KOG3912|consen 175 ITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAA 254 (372)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHH
Confidence 3577889999999999888765554 3579999999999988855433 2 22211100 1222344554332
Q ss_pred -------HHHHHH-HHHHHHHH-hh---ccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHH
Q 024756 79 -------LLGLIG-SSGQIIYF-TG---LKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTG 146 (263)
Q Consensus 79 -------l~g~l~-~~~~~~~~-~g---l~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G 146 (263)
.+...+ ..+-.+|+ .| -|+.++++=.++-..-..++.+++..+..|++... |+.|.++-..|
T Consensus 255 ~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~ll------qilGFliLi~G 328 (372)
T KOG3912|consen 255 LQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLL------QILGFLILIMG 328 (372)
T ss_pred hcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 122222 11222222 22 24557888888888888899999999999999999 99999999999
Q ss_pred HHHH
Q 024756 147 AFMI 150 (263)
Q Consensus 147 ~~ll 150 (263)
.++-
T Consensus 329 i~lY 332 (372)
T KOG3912|consen 329 IILY 332 (372)
T ss_pred HHHH
Confidence 8764
No 87
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=84.62 E-value=2.5 Score=37.37 Aligned_cols=136 Identities=15% Similarity=0.167 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHH-HHHHhhc--CC---CCCCHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALT-KGMNKFVSVVYYNALGTLILLP-YFLFRRN--KG---ASLTWSLIWRFFLLGL 82 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~-~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~--~~---~~~~~~~~~~~~l~g~ 82 (263)
..++..+-.+.+.-+.-.-+-..+.. +.-+..+++++.+.++.+.++. +.....- -+ ...++|.....++.++
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 34555555555555555555444442 2345677788888888887766 5442110 01 1234566666666666
Q ss_pred HHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 83 IGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 83 l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
.++++.-+..-=++.-++..++.++..--..+.+++.++|.++++.. ...|.++.+.|+.+=.
T Consensus 269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~ 331 (367)
T KOG1582|consen 269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNM 331 (367)
T ss_pred HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhc
Confidence 66666666666666668888888888888899999999999999999 8999999999997754
No 88
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=84.56 E-value=3.3 Score=35.65 Aligned_cols=133 Identities=17% Similarity=0.225 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCC-----CCCHHHHHHHHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVISKAALT-KGMNKFVSVVYYNALGTLILLP-YFLFRRNKGA-----SLTWSLIWRFFLLGLIG 84 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~K~~~~-~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~-----~~~~~~~~~~~l~g~l~ 84 (263)
|++++....+.=+..-..+|...+ +..--++..++..+++..+++. .+..+. +.+ .++...+...+..|+..
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~ed-ws~~n~annl~~d~l~am~ISgl~s 234 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFED-WSPGNLANNLSVDSLMAMFISGLCS 234 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhcc-CCcchhhcCCChHHHHHHHHHHHHH
Confidence 334444333333333344444332 2456788899999999999888 554432 121 12222333455556665
Q ss_pred HHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 85 SSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 85 ~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
..-.++--|.++.++++.-+....+.-.-.++-+..+++|+.+.. .+.++++++...++-.
T Consensus 235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYa 295 (309)
T COG5070 235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYA 295 (309)
T ss_pred hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHH
Confidence 555566778898888888887877777777888888999999999 9999999987665543
No 89
>COG2510 Predicted membrane protein [Function unknown]
Probab=81.48 E-value=6.9 Score=30.68 Aligned_cols=51 Identities=14% Similarity=0.125 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHhcC
Q 024756 185 GLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIVEN 236 (263)
Q Consensus 185 ~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 236 (263)
..+.+++++.+++-.++.|--.++. ||...++...++..+.+..+....++
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~ 55 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN 55 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc
Confidence 6789999999999999999888888 58888998888888888877766654
No 90
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=80.32 E-value=16 Score=31.72 Aligned_cols=126 Identities=13% Similarity=0.104 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCC-CHHHHHHHHHHHHHH-H
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKG-MNKFVSVVYYNALGTLILLP-YFLFRRNKGASL-TWSLIWRFFLLGLIG-S 85 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~-~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~-~~~~~~~~~l~g~l~-~ 85 (263)
..|.++++++.++=|...+.....+.++ .+...-...=...+.++.++ ....++.+.... -.+.+-...+.-++. .
T Consensus 113 ~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a 192 (244)
T PF04142_consen 113 LLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQA 192 (244)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHH
Confidence 4678888999999999999998888633 34444444445666666655 444322111100 011111112222222 4
Q ss_pred HHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHH
Q 024756 86 SGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGAT 141 (263)
Q Consensus 86 ~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~ 141 (263)
.+-+..-.-+||.+.-.=..-....-+++.+++..+++.+++.. ..+|..
T Consensus 193 ~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~------f~lg~~ 242 (244)
T PF04142_consen 193 IGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLS------FLLGAA 242 (244)
T ss_pred HhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchH------Hhhhee
Confidence 44455566777877665555666777889999999999999998 777654
No 91
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=77.95 E-value=15 Score=28.91 Aligned_cols=52 Identities=15% Similarity=0.004 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHhcC
Q 024756 185 GLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIVEN 236 (263)
Q Consensus 185 ~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 236 (263)
.++.+++..+-++...++.+..++..+|...+.+.+..|.+.+..+..+.++
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~ 54 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGR 54 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4678888999999999999999988559999999999999999888877765
No 92
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=74.57 E-value=8.9 Score=34.08 Aligned_cols=137 Identities=20% Similarity=0.129 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHH-HHHHhh-cC-C--CCC-CHHHHHHHHHHHH
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTK-GMNKFVSVVYYNALGTLILLP-YFLFRR-NK-G--ASL-TWSLIWRFFLLGL 82 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~-~~~p~~~~~~R~~~a~l~ll~-~~~~~~-~~-~--~~~-~~~~~~~~~l~g~ 82 (263)
+.|.++=+++.+.=+.+.+-+|..... +=..+.++++..+.+.++.+| ..+... .. + ++. ..+-|....+.|+
T Consensus 184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl 263 (347)
T KOG1442|consen 184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL 263 (347)
T ss_pred hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH
Confidence 346666677888888889999976542 123678899999999999999 654311 00 1 222 4566777777788
Q ss_pred HHHHHHHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 83 IGSSGQIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 83 l~~~~~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
+++.-.+.=.+=+|-|+|-+=.+=...-..--.++++.+.+|--+.. .|.|-++.+.|...-..
T Consensus 264 fgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~ 327 (347)
T KOG1442|consen 264 FGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTL 327 (347)
T ss_pred HHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHH
Confidence 88333333345567777766665555555666788899999999999 88898888888876654
No 93
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.18 E-value=46 Score=26.72 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHhcC
Q 024756 183 IGGLLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQALCFSVIVEN 236 (263)
Q Consensus 183 ~G~~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 236 (263)
+..+..+++..+-++..-++-+..+...+|+.-+...+..|++.+..+.++.++
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~ 58 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG 58 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 467888999999999999999998888669999999999999999988877544
No 94
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=65.55 E-value=15 Score=32.72 Aligned_cols=102 Identities=16% Similarity=0.228 Sum_probs=71.4
Q ss_pred HHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcccccccchhHHHHHHHHHHHHH
Q 024756 115 FLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCIS 194 (263)
Q Consensus 115 ~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~ 194 (263)
.+.+.++-+.|-... ...+..+...|.++..+.++. .+.+.+ ..|..++-.|-++
T Consensus 147 miggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs~------------------~sPNF~-~~Gv~mIsgALl~ 201 (367)
T KOG1582|consen 147 MIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADSQ------------------TSPNFN-LIGVMMISGALLA 201 (367)
T ss_pred hheeeeeccccccHH------HHHHHHHHHHHHHhhhhcccc------------------cCCCcc-eeeHHHHHHHHHH
Confidence 345667778887777 899999999999887763221 111222 4688777777777
Q ss_pred HHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q 024756 195 SAIWNVAQAATIRGYP-EEMTVVFFYTFFITIQALCFSVIVENDIDAW 241 (263)
Q Consensus 195 ~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~ 241 (263)
=|.-.-++.+..+..| +...+.++...+|.+-++......++-.+.|
T Consensus 202 DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~ 249 (367)
T KOG1582|consen 202 DAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAW 249 (367)
T ss_pred HHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhh
Confidence 7887888888877775 3566778888888887777776665544444
No 95
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=61.61 E-value=61 Score=27.14 Aligned_cols=93 Identities=10% Similarity=0.019 Sum_probs=57.2
Q ss_pred ccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHhhcCccc---------cccCCCCCCCCCCccccc
Q 024756 106 MANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITLYRGPLL---------LMASSTSDSPDHPKLLFS 176 (263)
Q Consensus 106 i~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~~~~~~~---------~~~~s~~~~~~~~~~~~~ 176 (263)
.-+..|+++++.+....+||.+.. |+++.++...|++.-...+.+.. ...+. |..++ ...
T Consensus 10 ~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~--~~~~~---~~~ 78 (222)
T TIGR00803 10 FKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQM--VQSSA---KTL 78 (222)
T ss_pred HHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeec--CCCCc---ccc
Confidence 345677888888888888888877 89999998888875332111100 00000 00000 001
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 024756 177 QQSEWLIGGLLLVLVCISSAIWNVAQAATIRGY 209 (263)
Q Consensus 177 ~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~ 209 (263)
...+...|....+.++++-++-.+..++..|+.
T Consensus 79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~ 111 (222)
T TIGR00803 79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDG 111 (222)
T ss_pred ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence 112445788888888888888888888876655
No 96
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=56.36 E-value=52 Score=26.89 Aligned_cols=73 Identities=16% Similarity=0.160 Sum_probs=48.5
Q ss_pred cchhHHH-------HHHHHHHHHhhcCccccccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh-
Q 024756 136 KTLGATV-------AVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIR- 207 (263)
Q Consensus 136 ~~~g~~l-------~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~- 207 (263)
+.+|+.+ ++.|+.++...+ +.+........+.+++.|++..++-....+
T Consensus 101 r~LGIfLPLITTNCaVLgvaLln~~~-----------------------~~~f~qsv~~gf~a~lGfslvmvlfA~iRER 157 (193)
T COG4657 101 RLLGIFLPLITTNCAVLGVALLNINE-----------------------GHNFLQSVVYGFGAALGFSLVMVLFAAIRER 157 (193)
T ss_pred HHHHHhhhhHhhchHHHHHHHHHhhh-----------------------hhhHHHHHHHHhhhHhhHHHHHHHHHHHHHH
Confidence 7777764 667888876421 123445677888888888888877665544
Q ss_pred ----hCCchHHHHHHHHHHHHHHHHHHH
Q 024756 208 ----GYPEEMTVVFFYTFFITIQALCFS 231 (263)
Q Consensus 208 ----~~~~~~~~~~~~~~~~~i~~l~~~ 231 (263)
+.|.|+.-+.+.++.+++..+.+.
T Consensus 158 ~~~advP~~frG~~ialitagLmSlaFm 185 (193)
T COG4657 158 LALADVPAPFRGAAIALITAGLMSLAFM 185 (193)
T ss_pred HHHhcCCCCCCCcchHHHHHHHHHHHHc
Confidence 345677667777777777666554
No 97
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=52.37 E-value=57 Score=21.37 Aligned_cols=45 Identities=29% Similarity=0.307 Sum_probs=33.2
Q ss_pred cchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024756 136 KTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNVAQAATIRG 208 (263)
Q Consensus 136 ~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~k~~~~~ 208 (263)
.++|.++.+.|++++.. .|| |....+++-..+|.+....|+..++
T Consensus 5 ~v~G~~lv~~Gii~~~l-PGp---------------------------G~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPL-PGP---------------------------GLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhcC-CCC---------------------------cHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 57899999999988865 121 5667777777788888888876543
No 98
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=49.80 E-value=43 Score=30.01 Aligned_cols=68 Identities=13% Similarity=0.097 Sum_probs=42.6
Q ss_pred HHHHHHHHhhccccCcceeeeccc-hhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 85 SSGQIIYFTGLKFSSPTLSSAMAN-LIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 85 ~~~~~~~~~gl~~~~a~~asii~~-~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
.....+.+.|+++-+++...=+.+ ..-..+.+-+.++++|--+...+.-.....|.++.+.|+.++..
T Consensus 224 ~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~ 292 (300)
T PF05653_consen 224 VLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSS 292 (300)
T ss_pred HHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeec
Confidence 445555667999999888775544 55566767777788875443311111135566667777777653
No 99
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=46.56 E-value=1.6e+02 Score=26.46 Aligned_cols=131 Identities=14% Similarity=0.146 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHH-HH--H-----HhhcCC---CCCC---HHHHH
Q 024756 11 IPFVAMVTVECTDVGLSVISKAALT-KGMNKFVSVVYYNALGTLILLP-YF--L-----FRRNKG---ASLT---WSLIW 75 (263)
Q Consensus 11 ~~~~~~l~a~~~wg~~~~~~K~~~~-~~~~p~~~~~~R~~~a~l~ll~-~~--~-----~~~~~~---~~~~---~~~~~ 75 (263)
.|+..+.++.+.=+.+.+.-...++ ++=++=+..++-=..+.+.++. .- . .++.+. |... .+.|.
T Consensus 164 iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~ 243 (330)
T KOG1583|consen 164 IGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWV 243 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHH
Confidence 4667777777777777777776664 3567778777776666555443 10 0 011110 1111 11222
Q ss_pred HHHHHHHHHHHHHHHHHhhccc----cCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 76 RFFLLGLIGSSGQIIYFTGLKF----SSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 76 ~~~l~g~l~~~~~~~~~~gl~~----~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
+++ ...+.+.+...|+.. +++-+.++...+-=.+..+++.+.+++++++. .|+|..+.+.|.++-.
T Consensus 244 yLl----~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~------h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 244 YLL----FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPW------HWLGAALVFFGTLLFA 313 (330)
T ss_pred HHH----HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHH------HHHHHHHHHHHHHHHH
Confidence 221 124455554444433 34445555667777888888988999999999 9999999999998765
No 100
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=45.93 E-value=59 Score=24.50 Aligned_cols=30 Identities=13% Similarity=0.140 Sum_probs=23.7
Q ss_pred HHHHHHHhhccccccccCccccchhHHHHHHHHHHH
Q 024756 115 FLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMI 150 (263)
Q Consensus 115 ~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll 150 (263)
...++++++|++++. ...|.++.+.++.++
T Consensus 77 ~~Fsv~~l~E~l~~n------~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWN------YLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHH------HHHHHHHHHHhhhee
Confidence 456678899999999 888888877766543
No 101
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=45.45 E-value=1.8e+02 Score=24.30 Aligned_cols=113 Identities=20% Similarity=0.255 Sum_probs=64.6
Q ss_pred ChHHHHHHHHHHHHHHHHH-HHHHhhcC---C--CCCCHHH------HHHHHHH----HHHHHHHHHHHHhhccccCcce
Q 024756 39 NKFVSVVYYNALGTLILLP-YFLFRRNK---G--ASLTWSL------IWRFFLL----GLIGSSGQIIYFTGLKFSSPTL 102 (263)
Q Consensus 39 ~p~~~~~~R~~~a~l~ll~-~~~~~~~~---~--~~~~~~~------~~~~~l~----g~l~~~~~~~~~~gl~~~~a~~ 102 (263)
+.......+.+.+.+++.. ....+|+. . ...++.. ....+.. ++...-+...|..+......+.
T Consensus 64 ~~~~~~~~~l~lGv~ll~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~laa~~~I~~~~ 143 (214)
T PF11139_consen 64 PSPVVGWLQLVLGVLLLLLAVRVWRRRPRPDPPSRPPRWLARLDSASPGGAFWLGFVLGLANPKTMLPYLAAIAIIAASG 143 (214)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCchhhhhhhhcCCchhHHHHHHHHHHhccccHHHHHHHHHHHHcCC
Confidence 5677778888888888777 55433330 0 0011100 0112222 2233344566776666665544
Q ss_pred ee-----------eccchhHHHHHHHHHHHhhcccccc-------ccCccccchhHHHHHHHHHHHH
Q 024756 103 SS-----------AMANLIPIYTFLLAVIFRIEKLDLR-------RSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 103 as-----------ii~~~~Pv~~~ila~l~~~e~~~~~-------~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
.+ ....+.|....++.+...+||.... -..+..++.+.++.++|+.++.
T Consensus 144 ~~~~~~~~~l~~y~~i~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~~l~~ 210 (214)
T PF11139_consen 144 LSPGTQVVALVVYCLIASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGALLLG 210 (214)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 44 1235678888888888877766321 1223447889999999998875
No 102
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=44.17 E-value=43 Score=29.62 Aligned_cols=130 Identities=12% Similarity=0.049 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHH-HHHHHHHH-HHH
Q 024756 11 IPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWR-FFLLGLIG-SSG 87 (263)
Q Consensus 11 ~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~-~~l~g~l~-~~~ 87 (263)
+|-.++++++-+|+.+.+.=..... ..|-.++...--++++++-.+ ... .|.+...+.| ++.. ..+...+. ++.
T Consensus 166 ~GD~lvi~GATlYaVSNv~EEflvk-n~d~~elm~~lgLfGaIIsaIQ~i~-~~~~~~tl~w-~~~i~~yl~f~L~MFll 242 (336)
T KOG2766|consen 166 KGDFLVIAGATLYAVSNVSEEFLVK-NADRVELMGFLGLFGAIISAIQFIF-ERHHVSTLHW-DSAIFLYLRFALTMFLL 242 (336)
T ss_pred cCcEEEEecceeeeeccccHHHHHh-cCcHHHHHHHHHHHHHHHHHHHHhh-hccceeeEee-hHHHHHHHHHHHHHHHH
Confidence 4445667788899999988888777 689999999999999998888 554 3333333333 2222 22223333 555
Q ss_pred HHHHHhhccccCcceeeeccchhHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 88 QIIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 88 ~~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
+.+.-.=++..+++.-.+=.-+.-.+..++ ..|+-+.++. -.++......|.++-.
T Consensus 243 Ysl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wL------Y~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 243 YSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWL------YFLAFATIATGLIIYS 298 (336)
T ss_pred HHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhh------hHHHHHHHHHhhEEee
Confidence 555556677777776555444555565555 3456568888 8888888888887654
No 103
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=40.65 E-value=2e+02 Score=23.43 Aligned_cols=26 Identities=27% Similarity=0.268 Sum_probs=14.4
Q ss_pred eeeeccchhHH-HHHHHHHHHhhcccc
Q 024756 102 LSSAMANLIPI-YTFLLAVIFRIEKLD 127 (263)
Q Consensus 102 ~asii~~~~Pv-~~~ila~l~~~e~~~ 127 (263)
......+..|+ ..+++...++++|..
T Consensus 59 ~~~~~~~~~P~a~~~~l~~~l~~~~~a 85 (194)
T PF07698_consen 59 DISYFPYLIPVAAAAMLLTILIDPRLA 85 (194)
T ss_pred cchhhhhhhHHHHHHHHHHHHhcchHH
Confidence 44556777777 334444445555544
No 104
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=40.52 E-value=92 Score=26.07 Aligned_cols=19 Identities=5% Similarity=-0.003 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 024756 12 PFVAMVTVECTDVGLSVIS 30 (263)
Q Consensus 12 ~~~~~l~a~~~wg~~~~~~ 30 (263)
++..+++.+++.|......
T Consensus 112 gi~tli~~~i~~G~~~~~~ 130 (206)
T PF06570_consen 112 GIITLILVSIVGGLVFYFI 130 (206)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 4555555555544444333
No 105
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=39.32 E-value=1.4e+02 Score=23.61 Aligned_cols=30 Identities=7% Similarity=-0.060 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 024756 180 EWLIGGLLLVLVCISSAIWNVAQAATIRGY 209 (263)
Q Consensus 180 ~~~~G~~~~l~aa~~~a~~~v~~k~~~~~~ 209 (263)
+...+.+..+.++..|.-|...+||+.+.+
T Consensus 118 ~~i~~l~~~li~a~IwipYf~~S~RVK~TF 147 (149)
T PF10754_consen 118 EAIRELLRSLIAAAIWIPYFLRSKRVKNTF 147 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Confidence 445678899999999999999999986654
No 106
>PRK02237 hypothetical protein; Provisional
Probab=38.68 E-value=40 Score=25.51 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 112 IYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 112 v~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
+...+..+.+=++|+++. -++|..++++|+.++.+
T Consensus 71 ~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 71 AGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhee
Confidence 334455566667788877 99999999999987754
No 107
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=37.59 E-value=35 Score=25.76 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhhccccccccCccccchhHHHHHHHHHHHHh
Q 024756 112 IYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMITL 152 (263)
Q Consensus 112 v~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~~ 152 (263)
+...+..+.+=++|+++. -++|..++++|+.++.+
T Consensus 69 ~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 69 VASLLWGWLVDGVRPDRW------DWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHheEe
Confidence 444555556667888877 99999999999988764
No 108
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.90 E-value=1.8e+02 Score=21.75 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=25.4
Q ss_pred HHHHHHHhhccccccccCccccchhHHHHHHHHHHHH
Q 024756 115 FLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFMIT 151 (263)
Q Consensus 115 ~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~ll~ 151 (263)
...+.+.++|++++. .+.|.++...|+.++.
T Consensus 84 v~Fsvfyl~epl~~~------~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWN------YLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHH------HHHHHHHHHHHHHHhc
Confidence 456777899999999 9999888888887764
No 109
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=35.56 E-value=2.6e+02 Score=23.30 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=13.8
Q ss_pred HHHHhhccccCcceeeeccchhHHHHHHHHHHHh
Q 024756 89 IIYFTGLKFSSPTLSSAMANLIPIYTFLLAVIFR 122 (263)
Q Consensus 89 ~~~~~gl~~~~a~~asii~~~~Pv~~~ila~l~~ 122 (263)
...+...+..++...-. +.|....+++.+.+
T Consensus 161 ~~~~~~~~~lp~~inp~---l~~~~~iiig~i~~ 191 (206)
T PF06570_consen 161 IVIFVLTSFLPPVINPV---LPPWVYIIIGVIAF 191 (206)
T ss_pred HHHHHHHHHccccCCcC---CCHHHHHHHHHHHH
Confidence 33333444456553322 33455555555443
No 110
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=35.37 E-value=40 Score=30.40 Aligned_cols=128 Identities=13% Similarity=0.124 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHH----h-h-cCC-------CCCCHHHHHHHHHHH
Q 024756 16 MVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLF----R-R-NKG-------ASLTWSLIWRFFLLG 81 (263)
Q Consensus 16 ~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~----~-~-~~~-------~~~~~~~~~~~~l~g 81 (263)
|+++.+|||+-....|++-.++ ...+...+-+.++.++... ..+. . . .+. ..-+++.+...+..|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~g-R~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRG-RLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcC-CccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 4578899999999999875532 3334566666666555444 3221 1 0 011 123555566666667
Q ss_pred HHHHHHHHHHHhhccccCcceeeeccch-hHHHHHHHHHHHhhccccccccCccccchhHHHHHHHHHH
Q 024756 82 LIGSSGQIIYFTGLKFSSPTLSSAMANL-IPIYTFLLAVIFRIEKLDLRRSSSQAKTLGATVAVTGAFM 149 (263)
Q Consensus 82 ~l~~~~~~~~~~gl~~~~a~~asii~~~-~Pv~~~ila~l~~~e~~~~~~~~~~~~~~g~~l~~~G~~l 149 (263)
++..+++++..+++...+-+.+-.+... .-++-.++.+ ++..|..+.+. -..|+.+.++.+++
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a~i----LF~GV~cf~iAI~l 143 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRAEI----LFPGVACFLIAIIL 143 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCceE----EEccHHHHHHHHHH
Confidence 7777788888888888877776666432 2223333333 34555554311 24466666655544
No 111
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=32.19 E-value=31 Score=27.50 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=24.0
Q ss_pred hccccCcceeeeccchhHHHHHHHHHHHhhcccccc
Q 024756 94 GLKFSSPTLSSAMANLIPIYTFLLAVIFRIEKLDLR 129 (263)
Q Consensus 94 gl~~~~a~~asii~~~~Pv~~~ila~l~~~e~~~~~ 129 (263)
|+..-+.-.++.+.|..|+++.+++.+. -+++...
T Consensus 68 Gi~EkslL~sA~LvYi~PL~~l~v~~~L-a~~L~~~ 102 (150)
T COG3086 68 GIEEKSLLKSALLVYIFPLVGLFLGAIL-AQYLFFS 102 (150)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHH-HHHHhhh
Confidence 3444455667788899999998888754 4455555
No 112
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=27.22 E-value=3.9e+02 Score=23.39 Aligned_cols=89 Identities=12% Similarity=0.064 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Q 024756 9 NTIPFVAMVTVECTDVGLSVISKAALTKGM-NKFVSVVYYNALGTLILLP-YFLFRRNKGASLTWSLIWRFFLLGLIGSS 86 (263)
Q Consensus 9 ~~~~~~~~l~a~~~wg~~~~~~K~~~~~~~-~p~~~~~~R~~~a~l~ll~-~~~~~~~~~~~~~~~~~~~~~l~g~l~~~ 86 (263)
+.+-...++++++.=+......|...++.. +....+.+-+++..++++. -...++ ..++.+.-.++.....|+.+++
T Consensus 78 ~~~~~~~iiiatip~~v~G~~~~~~i~~~~~~~~~~v~~~Li~~g~lL~~~~~~~~~-~~~~~~~~~~~dal~iGl~Q~l 156 (259)
T PF02673_consen 78 DRRLLLLIIIATIPTGVVGLLFKDFIEALFFSSPLVVAIALIITGLLLWLADRLKRK-GRKDEEDITFKDALIIGLAQGL 156 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHccC-CCCCcccCCHHHHHHHHHHHHc
Confidence 344556677777777777766666565344 2344455555555555555 332222 1112223334556667777643
Q ss_pred HHHHHHhhccccCcc
Q 024756 87 GQIIYFTGLKFSSPT 101 (263)
Q Consensus 87 ~~~~~~~gl~~~~a~ 101 (263)
+ ..=|+.+.+.+
T Consensus 157 A---l~PGiSRSG~T 168 (259)
T PF02673_consen 157 A---LIPGISRSGAT 168 (259)
T ss_pred c---cCCCcChHHHH
Confidence 3 35566665544
No 113
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=26.85 E-value=2.3e+02 Score=22.57 Aligned_cols=59 Identities=20% Similarity=0.275 Sum_probs=32.8
Q ss_pred CChHHHHHHHHHHHHHHHHH-HH------HHhhcC----CCCCCHHHHHHHHHHHHHH-HHHHHHHHhhcc
Q 024756 38 MNKFVSVVYYNALGTLILLP-YF------LFRRNK----GASLTWSLIWRFFLLGLIG-SSGQIIYFTGLK 96 (263)
Q Consensus 38 ~~p~~~~~~R~~~a~l~ll~-~~------~~~~~~----~~~~~~~~~~~~~l~g~l~-~~~~~~~~~gl~ 96 (263)
+.|.|+.+..++.-.+.-+. .. ..+|+. .+-.+++.+..+...|+.. ......|+.+..
T Consensus 4 l~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~ 74 (182)
T PF00689_consen 4 LTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLY 74 (182)
T ss_dssp S-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 46777777777664442222 11 111111 1225777888887778887 666666766665
No 114
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=22.39 E-value=2.9e+02 Score=23.23 Aligned_cols=53 Identities=11% Similarity=0.164 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHHhh
Q 024756 10 TIPFVAMVTVECTDVGLSVISKAALTKGMNKFVSVVYYNALGTLILLP-YFLFRR 63 (263)
Q Consensus 10 ~~~~~~~l~a~~~wg~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~ll~-~~~~~~ 63 (263)
+|.++..+++.++|=.-.++.-.. ...++|..--..-.+++++++.. ++.+||
T Consensus 162 ~K~~lv~~~sm~lWi~v~i~t~~l-PtslN~~L~pi~l~IiGav~lalRfylkkk 215 (226)
T COG4858 162 WKYLLVAVLSMLLWIAVMIATVFL-PTSLNPQLPPIALTIIGAVILALRFYLKKK 215 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CCcCCcCCchHHHHHHHHHHHHHHHHHHHh
Confidence 466666677777775555444332 22333333323333455555555 544443
No 115
>PF12292 DUF3624: Protein of unknown function (DUF3624); InterPro: IPR022072 This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.
Probab=21.92 E-value=1.9e+02 Score=20.50 Aligned_cols=40 Identities=28% Similarity=0.356 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHH
Q 024756 186 LLLVLVCISSAIWNVAQAATIRGYPEEMTVVFFYTFFITIQ 226 (263)
Q Consensus 186 ~~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~ 226 (263)
-+..++.++|.++...-|.-++.. .+++..+..+.+.+++
T Consensus 24 QLtvLs~~~w~iWw~~f~d~P~si-eSIALl~~~~AfsgLL 63 (77)
T PF12292_consen 24 QLTVLSVLSWPIWWFFFRDTPTSI-ESIALLFFCFAFSGLL 63 (77)
T ss_pred HHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHHH
Confidence 478899999999998865544444 2343333333333333
No 116
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=21.23 E-value=32 Score=30.73 Aligned_cols=19 Identities=21% Similarity=0.494 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 024756 219 YTFFITIQALCFSVIVEND 237 (263)
Q Consensus 219 ~~~~~~i~~l~~~~~~~~~ 237 (263)
..++=.+++++++..+.+.
T Consensus 144 LAF~LaivlLIIAv~L~qa 162 (381)
T PF05297_consen 144 LAFLLAIVLLIIAVLLHQA 162 (381)
T ss_dssp -------------------
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334445666777666554
No 117
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=20.91 E-value=3.3e+02 Score=23.84 Aligned_cols=55 Identities=11% Similarity=-0.065 Sum_probs=37.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CChHHHHHH----HHHHHHHHHHH-HHHHh
Q 024756 8 QNTIPFVAMVTVECTDVGLSVISKAALTKG-------MNKFVSVVY----YNALGTLILLP-YFLFR 62 (263)
Q Consensus 8 ~~~~~~~~~l~a~~~wg~~~~~~K~~~~~~-------~~p~~~~~~----R~~~a~l~ll~-~~~~~ 62 (263)
+|..+..+.+++.+++|++++=+++..+|+ -+++..++- -++.+.+.+.. +.++|
T Consensus 180 ~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f~GIfltSt~~F~~Y~~~~r 246 (254)
T PF07857_consen 180 KRIVGIILAVFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHFSGIFLTSTVYFVIYCIIKR 246 (254)
T ss_pred chhHhHHHHHHHHHHHhcccchHHHHHhCccccCCCCCcchheeHHHHhhHHHHHHHHHHHHHHhhc
Confidence 567789999999999999999999988753 133333333 34455555555 55543
No 118
>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain. Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.
Probab=20.30 E-value=3.9e+02 Score=20.20 Aligned_cols=57 Identities=12% Similarity=-0.030 Sum_probs=35.6
Q ss_pred ccCccccchhHHHHHHHHHHHHhhcCccccccCCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHH
Q 024756 130 RSSSQAKTLGATVAVTGAFMITLYRGPLLLMASSTSDSPDHPKLLFSQQSEWLIGGLLLVLVCISSAIWNV 200 (263)
Q Consensus 130 ~~~~~~~~~g~~l~~~G~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v 200 (263)
+.+...+.++.+++++|..+....++.... ....+.+...|....++..+-......
T Consensus 35 ~~H~~lq~~a~~~~~~g~~~~~~~~~~~~~--------------~~~~s~H~~lGl~~~~l~~~Q~~~G~~ 91 (129)
T smart00665 35 LLHVVLQILALVLGVIGLLAIFISHNESGI--------------ANFYSLHSWLGLAAFVLAGLQWLSGFL 91 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccCC--------------CCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 345566889999999999887653321100 011234556788877777776666555
No 119
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=20.03 E-value=59 Score=26.11 Aligned_cols=24 Identities=17% Similarity=0.288 Sum_probs=16.2
Q ss_pred cCcceeeeccchhHHHHHHHHHHH
Q 024756 98 SSPTLSSAMANLIPIYTFLLAVIF 121 (263)
Q Consensus 98 ~~a~~asii~~~~Pv~~~ila~l~ 121 (263)
-+...++.+.|..|++..+.+..+
T Consensus 72 ~~llkaa~lvYllPLl~li~ga~l 95 (154)
T PRK10862 72 GSLLRSALLVYMTPLVGLFLGAAL 95 (154)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445667788888888877554
Done!