Query 024758
Match_columns 263
No_of_seqs 189 out of 1523
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 07:11:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024758.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024758hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0546 Gph Predicted phosphat 100.0 1.7E-38 3.6E-43 277.2 17.3 204 1-262 3-213 (220)
2 PRK13226 phosphoglycolate phos 100.0 6.6E-35 1.4E-39 255.7 16.9 203 1-262 11-220 (229)
3 PRK13288 pyrophosphatase PpaX; 100.0 2.4E-33 5.3E-38 242.4 16.4 196 1-260 2-204 (214)
4 TIGR01422 phosphonatase phosph 100.0 2E-32 4.3E-37 242.8 17.6 211 3-262 3-248 (253)
5 TIGR01449 PGP_bact 2-phosphogl 100.0 1.2E-32 2.5E-37 236.9 15.3 201 5-261 1-208 (213)
6 TIGR03351 PhnX-like phosphonat 100.0 5.8E-32 1.3E-36 234.3 18.3 203 2-262 1-215 (220)
7 PLN02770 haloacid dehalogenase 100.0 3.3E-32 7.2E-37 241.5 17.1 203 1-261 21-230 (248)
8 PRK13478 phosphonoacetaldehyde 100.0 1.2E-31 2.6E-36 240.0 18.1 213 2-262 4-250 (267)
9 PRK13225 phosphoglycolate phos 100.0 1.2E-31 2.6E-36 241.6 17.5 197 2-261 62-262 (273)
10 TIGR01454 AHBA_synth_RP 3-amin 100.0 1.1E-31 2.3E-36 230.7 16.0 191 5-261 1-198 (205)
11 PRK13223 phosphoglycolate phos 100.0 3.4E-31 7.4E-36 238.4 16.9 205 1-260 12-223 (272)
12 PLN03243 haloacid dehalogenase 100.0 4.2E-31 9.2E-36 236.5 16.3 198 3-262 25-230 (260)
13 PRK11587 putative phosphatase; 100.0 2.5E-30 5.4E-35 224.7 17.4 194 2-262 3-203 (218)
14 PLN02575 haloacid dehalogenase 100.0 4.6E-30 1E-34 239.7 17.1 185 3-246 132-324 (381)
15 PRK10826 2-deoxyglucose-6-phos 100.0 6.3E-29 1.4E-33 216.1 17.6 203 1-262 6-215 (222)
16 PRK13222 phosphoglycolate phos 100.0 7.4E-29 1.6E-33 214.8 16.6 204 2-261 6-216 (226)
17 PLN02779 haloacid dehalogenase 100.0 5.2E-29 1.1E-33 225.8 15.5 217 3-262 41-268 (286)
18 PLN02940 riboflavin kinase 100.0 1.6E-28 3.6E-33 230.8 16.6 198 3-262 12-216 (382)
19 TIGR02253 CTE7 HAD superfamily 100.0 1.5E-28 3.2E-33 212.7 14.8 121 137-262 92-220 (221)
20 TIGR01990 bPGM beta-phosphoglu 100.0 6.1E-28 1.3E-32 203.0 17.3 178 4-237 1-185 (185)
21 PRK10563 6-phosphogluconate ph 100.0 7.1E-28 1.5E-32 209.0 16.8 197 2-261 4-207 (221)
22 PRK10725 fructose-1-P/6-phosph 100.0 5E-28 1.1E-32 204.5 14.3 175 3-237 6-186 (188)
23 TIGR02009 PGMB-YQAB-SF beta-ph 100.0 2.1E-27 4.5E-32 199.7 17.4 176 2-236 1-185 (185)
24 PRK06698 bifunctional 5'-methy 100.0 1.3E-27 2.8E-32 229.6 15.5 203 1-261 240-448 (459)
25 PHA02597 30.2 hypothetical pro 99.9 5.5E-27 1.2E-31 200.2 12.5 169 1-241 1-178 (197)
26 TIGR02254 YjjG/YfnB HAD superf 99.9 1.9E-26 4.1E-31 199.2 15.4 117 137-262 95-220 (224)
27 COG0637 Predicted phosphatase/ 99.9 5.2E-26 1.1E-30 199.0 16.3 183 1-241 1-190 (221)
28 PRK10748 flavin mononucleotide 99.9 1.5E-26 3.2E-31 204.0 12.5 195 3-241 11-212 (238)
29 PRK09449 dUMP phosphatase; Pro 99.9 7.7E-26 1.7E-30 196.5 16.6 98 137-239 93-198 (224)
30 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 1.4E-25 3E-30 191.8 15.1 178 3-224 1-196 (197)
31 PLN02919 haloacid dehalogenase 99.9 1.3E-25 2.8E-30 233.7 17.7 201 3-261 76-284 (1057)
32 TIGR01993 Pyr-5-nucltdase pyri 99.9 9.6E-26 2.1E-30 190.6 13.6 95 137-236 82-184 (184)
33 PLN02811 hydrolase 99.9 7.6E-25 1.6E-29 190.6 18.1 193 9-262 1-206 (220)
34 TIGR02252 DREG-2 REG-2-like, H 99.9 8E-25 1.7E-29 187.3 15.3 92 138-235 104-203 (203)
35 PRK14988 GMP/IMP nucleotidase; 99.9 5.2E-25 1.1E-29 192.8 12.5 105 136-245 90-202 (224)
36 TIGR02247 HAD-1A3-hyp Epoxide 99.9 8.5E-25 1.8E-29 188.4 11.3 108 137-249 92-208 (211)
37 TIGR01428 HAD_type_II 2-haloal 99.9 5.6E-24 1.2E-28 181.6 14.7 97 138-239 91-194 (198)
38 PF13419 HAD_2: Haloacid dehal 99.9 3.1E-24 6.7E-29 176.3 12.0 95 137-236 75-176 (176)
39 TIGR01672 AphA HAD superfamily 99.9 4.3E-24 9.2E-29 188.7 13.0 100 135-244 110-218 (237)
40 TIGR01549 HAD-SF-IA-v1 haloaci 99.9 1.1E-22 2.3E-27 166.7 14.5 85 137-224 62-152 (154)
41 PRK09456 ?-D-glucose-1-phospha 99.9 1.5E-22 3.2E-27 173.5 15.5 106 139-248 84-196 (199)
42 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 6.7E-22 1.4E-26 165.3 14.8 93 138-236 84-183 (183)
43 TIGR01493 HAD-SF-IA-v2 Haloaci 99.9 7.7E-22 1.7E-26 164.9 9.8 83 137-224 88-174 (175)
44 PLN02954 phosphoserine phospha 99.9 4.3E-21 9.4E-26 166.6 13.8 116 138-262 83-219 (224)
45 TIGR01685 MDP-1 magnesium-depe 99.9 2.7E-21 6E-26 163.3 10.5 105 137-246 43-166 (174)
46 PRK08942 D,D-heptose 1,7-bisph 99.8 3.3E-21 7.1E-26 163.1 10.0 114 139-261 29-171 (181)
47 TIGR00338 serB phosphoserine p 99.8 4.8E-20 1E-24 159.5 13.1 91 138-233 84-191 (219)
48 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 8.5E-20 1.8E-24 155.1 11.2 97 137-238 78-191 (201)
49 PRK13582 thrH phosphoserine ph 99.8 2.6E-19 5.6E-24 153.3 12.9 94 137-240 66-171 (205)
50 PRK11009 aphA acid phosphatase 99.8 2E-19 4.4E-24 158.8 10.7 99 133-243 108-217 (237)
51 TIGR01662 HAD-SF-IIIA HAD-supe 99.8 2E-19 4.4E-24 144.2 9.6 94 139-237 25-131 (132)
52 PRK06769 hypothetical protein; 99.8 1.3E-19 2.8E-24 152.8 8.0 119 138-262 27-167 (173)
53 PRK09552 mtnX 2-hydroxy-3-keto 99.8 4.6E-19 1E-23 154.2 10.7 91 137-233 72-183 (219)
54 COG1011 Predicted hydrolase (H 99.8 8E-18 1.7E-22 145.8 18.4 100 137-241 97-203 (229)
55 TIGR00213 GmhB_yaeD D,D-heptos 99.8 3.1E-19 6.6E-24 150.5 8.9 116 138-262 25-174 (176)
56 TIGR01691 enolase-ppase 2,3-di 99.8 1.1E-17 2.4E-22 146.4 17.7 111 126-242 83-201 (220)
57 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 6.6E-17 1.4E-21 135.7 13.9 87 138-232 71-184 (188)
58 TIGR01261 hisB_Nterm histidino 99.7 2.6E-17 5.6E-22 137.5 9.9 103 137-246 27-156 (161)
59 KOG2914 Predicted haloacid-hal 99.7 6.3E-16 1.4E-20 135.1 15.9 176 3-238 11-197 (222)
60 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.7 1.1E-17 2.4E-22 149.5 4.0 118 139-261 120-249 (257)
61 TIGR01668 YqeG_hyp_ppase HAD s 99.7 9.8E-17 2.1E-21 134.9 9.5 103 138-250 42-149 (170)
62 PRK11590 hypothetical protein; 99.7 1.4E-15 3E-20 131.8 15.2 171 3-224 7-194 (211)
63 PRK11133 serB phosphoserine ph 99.7 1.7E-15 3.6E-20 139.7 16.0 101 138-248 180-297 (322)
64 PHA02530 pseT polynucleotide k 99.7 1.6E-16 3.5E-21 144.0 8.9 98 138-240 186-299 (300)
65 TIGR01656 Histidinol-ppas hist 99.7 3.3E-16 7.1E-21 128.4 9.5 96 139-239 27-147 (147)
66 TIGR02137 HSK-PSP phosphoserin 99.6 4.6E-15 1E-19 128.3 14.3 88 138-233 67-167 (203)
67 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 1.1E-14 2.3E-19 124.3 14.6 112 109-234 66-195 (202)
68 TIGR03333 salvage_mtnX 2-hydro 99.6 3.8E-15 8.2E-20 129.3 10.6 89 138-231 69-177 (214)
69 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 4.3E-15 9.4E-20 124.7 8.1 89 139-234 42-159 (166)
70 TIGR01452 PGP_euk phosphoglyco 99.6 5.6E-16 1.2E-20 139.8 2.0 118 139-262 143-279 (279)
71 KOG3085 Predicted hydrolase (H 99.6 1E-14 2.2E-19 128.2 9.8 210 3-251 8-227 (237)
72 PRK05446 imidazole glycerol-ph 99.6 3E-14 6.5E-19 132.7 12.6 107 134-247 25-158 (354)
73 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 5E-15 1.1E-19 119.0 6.4 85 139-224 29-126 (128)
74 PF00702 Hydrolase: haloacid d 99.5 9.7E-14 2.1E-18 118.4 12.9 83 138-224 126-213 (215)
75 smart00577 CPDc catalytic doma 99.5 7.1E-15 1.5E-19 120.8 5.5 91 137-233 43-138 (148)
76 TIGR01488 HAD-SF-IB Haloacid D 99.5 4.3E-14 9.4E-19 117.8 10.1 86 138-224 72-176 (177)
77 PRK10444 UMP phosphatase; Prov 99.5 1.4E-14 3.1E-19 129.0 5.8 69 189-261 174-244 (248)
78 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.4 3.4E-14 7.4E-19 126.4 3.0 118 138-261 120-248 (249)
79 PRK10530 pyridoxal phosphate ( 99.4 4.5E-13 9.8E-18 119.2 9.9 102 139-249 137-250 (272)
80 COG0560 SerB Phosphoserine pho 99.4 4.3E-12 9.3E-17 110.6 15.6 102 138-249 76-194 (212)
81 TIGR01670 YrbI-phosphatas 3-de 99.4 7E-13 1.5E-17 109.7 7.4 86 144-240 36-121 (154)
82 TIGR02726 phenyl_P_delta pheny 99.4 1.1E-12 2.3E-17 110.6 7.2 77 147-233 45-121 (169)
83 cd01427 HAD_like Haloacid deha 99.4 4.2E-12 9.1E-17 99.2 9.7 95 137-236 22-139 (139)
84 TIGR01686 FkbH FkbH-like domai 99.3 2.3E-12 5.1E-17 118.6 8.5 86 137-224 29-121 (320)
85 PLN02645 phosphoglycolate phos 99.3 1.6E-13 3.6E-18 125.8 0.8 105 152-261 186-302 (311)
86 PRK08238 hypothetical protein; 99.3 1.8E-11 4E-16 118.4 13.3 87 139-239 72-167 (479)
87 TIGR01545 YfhB_g-proteo haloac 99.3 2.1E-10 4.5E-15 99.8 18.0 106 109-224 72-193 (210)
88 PRK09484 3-deoxy-D-manno-octul 99.3 1.4E-11 3E-16 104.7 8.1 79 148-237 60-138 (183)
89 PF13242 Hydrolase_like: HAD-h 99.3 2.1E-12 4.6E-17 94.1 2.3 69 189-261 4-74 (75)
90 KOG3109 Haloacid dehalogenase- 99.2 2.5E-10 5.5E-15 98.5 14.8 96 138-238 99-206 (244)
91 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.2 4E-12 8.6E-17 112.4 2.9 92 140-237 139-241 (242)
92 PF06888 Put_Phosphatase: Puta 99.2 3.1E-10 6.7E-15 100.2 14.4 107 137-247 69-207 (234)
93 TIGR02244 HAD-IG-Ncltidse HAD 99.1 2.5E-10 5.5E-15 105.9 10.5 98 137-238 182-324 (343)
94 TIGR01663 PNK-3'Pase polynucle 99.1 1.3E-10 2.8E-15 113.4 8.2 82 140-224 198-302 (526)
95 COG2179 Predicted hydrolase of 99.1 4.6E-10 9.9E-15 93.2 8.8 88 140-237 47-138 (175)
96 TIGR01533 lipo_e_P4 5'-nucleot 99.1 1.1E-09 2.3E-14 98.6 11.7 82 137-223 116-205 (266)
97 TIGR01512 ATPase-IB2_Cd heavy 99.1 1.5E-10 3.3E-15 113.6 6.1 96 135-245 358-457 (536)
98 TIGR01525 ATPase-IB_hvy heavy 99.1 4E-10 8.7E-15 111.1 8.9 92 136-242 381-476 (556)
99 PRK00192 mannosyl-3-phosphogly 99.0 8.8E-10 1.9E-14 99.0 9.1 83 150-240 146-236 (273)
100 TIGR01544 HAD-SF-IE haloacid d 99.0 1E-08 2.2E-13 92.6 15.6 86 137-223 119-228 (277)
101 PF12710 HAD: haloacid dehalog 99.0 3E-09 6.5E-14 89.3 11.4 78 142-223 92-192 (192)
102 PRK01158 phosphoglycolate phos 99.0 8.2E-10 1.8E-14 96.0 8.0 85 154-249 117-208 (230)
103 COG0647 NagD Predicted sugar p 99.0 2E-09 4.3E-14 96.9 10.5 101 138-249 132-247 (269)
104 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.9 4.1E-09 8.9E-14 93.1 8.0 85 137-223 22-112 (242)
105 COG0241 HisB Histidinol phosph 98.9 1.2E-08 2.7E-13 86.6 10.2 97 139-242 31-154 (181)
106 TIGR02463 MPGP_rel mannosyl-3- 98.9 1.5E-08 3.2E-13 87.9 10.2 77 151-233 137-218 (221)
107 TIGR01511 ATPase-IB1_Cu copper 98.9 9.5E-09 2.1E-13 101.5 10.1 90 137-243 403-496 (562)
108 TIGR02251 HIF-SF_euk Dullard-l 98.8 2.1E-09 4.6E-14 89.7 4.1 103 138-247 41-148 (162)
109 TIGR01482 SPP-subfamily Sucros 98.8 6.3E-09 1.4E-13 90.0 6.7 87 153-250 108-201 (225)
110 PRK10671 copA copper exporting 98.8 2.3E-08 5E-13 103.0 8.7 95 138-247 649-746 (834)
111 PF12689 Acid_PPase: Acid Phos 98.7 7.7E-08 1.7E-12 81.0 10.2 110 136-252 42-165 (169)
112 TIGR01487 SPP-like sucrose-pho 98.7 4.6E-08 1E-12 84.6 6.8 88 153-249 108-198 (215)
113 KOG3120 Predicted haloacid deh 98.7 1.3E-07 2.9E-12 81.9 9.3 100 138-241 83-214 (256)
114 PRK10513 sugar phosphate phosp 98.5 5.6E-07 1.2E-11 80.2 9.6 53 190-250 196-248 (270)
115 TIGR01460 HAD-SF-IIA Haloacid 98.5 1.8E-07 4E-12 82.5 5.4 85 150-239 142-236 (236)
116 PRK10976 putative hydrolase; P 98.5 6.5E-07 1.4E-11 79.7 8.4 53 190-250 190-242 (266)
117 COG4359 Uncharacterized conser 98.4 2.3E-06 4.9E-11 72.5 10.3 83 137-224 71-177 (220)
118 TIGR01522 ATPase-IIA2_Ca golgi 98.4 8.2E-07 1.8E-11 92.2 9.1 99 138-244 527-648 (884)
119 PF06941 NT5C: 5' nucleotidase 98.4 9.4E-07 2E-11 75.4 7.7 93 134-245 68-170 (191)
120 KOG1615 Phosphoserine phosphat 98.4 4.8E-06 1E-10 71.1 11.5 84 137-223 86-190 (227)
121 PRK15126 thiamin pyrimidine py 98.4 1.5E-06 3.3E-11 77.7 8.7 53 190-250 188-240 (272)
122 COG4229 Predicted enolase-phos 98.3 2.2E-05 4.7E-10 66.5 13.7 94 137-237 101-204 (229)
123 TIGR01485 SPP_plant-cyano sucr 98.3 2.2E-06 4.8E-11 75.9 8.1 90 150-249 117-219 (249)
124 TIGR02250 FCP1_euk FCP1-like p 98.2 1.6E-06 3.5E-11 72.1 5.5 82 136-221 55-142 (156)
125 PRK11033 zntA zinc/cadmium/mer 98.2 5.3E-06 1.2E-10 84.7 10.3 92 138-246 567-661 (741)
126 TIGR00099 Cof-subfamily Cof su 98.2 1E-05 2.2E-10 71.6 10.6 52 190-249 188-239 (256)
127 TIGR02471 sucr_syn_bact_C sucr 98.2 1.2E-05 2.6E-10 70.5 10.4 90 151-251 111-212 (236)
128 PF08645 PNK3P: Polynucleotide 98.1 5.3E-06 1.2E-10 69.1 5.9 88 140-234 30-153 (159)
129 PLN02887 hydrolase family prot 98.1 3.7E-05 7.9E-10 76.4 12.3 54 190-251 507-560 (580)
130 PTZ00445 p36-lilke protein; Pr 98.1 1.3E-05 2.7E-10 69.6 7.8 93 140-237 76-205 (219)
131 COG0561 Cof Predicted hydrolas 98.1 9.7E-06 2.1E-10 72.1 7.2 53 190-250 189-241 (264)
132 TIGR02461 osmo_MPG_phos mannos 98.1 1.8E-05 4E-10 69.4 8.7 40 190-233 181-222 (225)
133 PLN02645 phosphoglycolate phos 98.0 1.7E-05 3.6E-10 72.9 8.4 88 138-235 43-136 (311)
134 TIGR01486 HAD-SF-IIB-MPGP mann 98.0 4.8E-05 1E-09 67.5 9.9 45 190-239 176-222 (256)
135 TIGR01456 CECR5 HAD-superfamil 98.0 2.8E-06 6.1E-11 78.4 1.6 52 189-244 233-298 (321)
136 PRK03669 mannosyl-3-phosphogly 97.9 5.5E-05 1.2E-09 67.8 9.5 38 190-231 187-227 (271)
137 PF09419 PGP_phosphatase: Mito 97.9 7E-05 1.5E-09 63.0 9.4 92 138-240 58-167 (168)
138 KOG2882 p-Nitrophenyl phosphat 97.8 0.00037 8E-09 63.3 11.6 57 189-249 224-281 (306)
139 TIGR01116 ATPase-IIA1_Ca sarco 97.8 0.00013 2.9E-09 76.2 10.1 94 138-242 536-659 (917)
140 TIGR01684 viral_ppase viral ph 97.7 5.3E-05 1.2E-09 68.9 5.6 45 142-187 149-196 (301)
141 smart00775 LNS2 LNS2 domain. T 97.7 0.00054 1.2E-08 56.9 11.1 88 141-232 29-141 (157)
142 COG1778 Low specificity phosph 97.7 4.9E-05 1.1E-09 62.9 4.3 76 148-233 47-122 (170)
143 COG4996 Predicted phosphatase 97.6 0.00016 3.5E-09 58.2 5.9 87 137-224 39-134 (164)
144 PLN02177 glycerol-3-phosphate 97.6 0.0026 5.7E-08 62.2 15.3 101 109-224 89-206 (497)
145 TIGR01675 plant-AP plant acid 97.5 0.0007 1.5E-08 59.7 9.8 81 137-223 118-213 (229)
146 PHA03398 viral phosphatase sup 97.5 0.00015 3.2E-09 66.2 5.6 73 141-214 150-260 (303)
147 PLN02382 probable sucrose-phos 97.5 0.001 2.3E-08 63.6 10.9 52 190-248 175-229 (413)
148 PF03767 Acid_phosphat_B: HAD 97.4 0.00016 3.5E-09 63.8 4.4 80 139-223 115-209 (229)
149 PRK14502 bifunctional mannosyl 97.4 0.0014 3.1E-08 65.9 10.7 41 190-234 613-655 (694)
150 PF05116 S6PP: Sucrose-6F-phos 97.3 0.0018 3.9E-08 57.6 10.2 48 190-244 165-212 (247)
151 COG4087 Soluble P-type ATPase 97.3 0.0028 6.1E-08 51.1 9.2 91 138-239 29-122 (152)
152 PF05761 5_nucleotid: 5' nucle 97.2 0.0014 3E-08 63.3 8.5 95 141-238 185-325 (448)
153 PLN02423 phosphomannomutase 97.2 0.0016 3.5E-08 57.8 7.7 39 190-237 189-231 (245)
154 PRK12702 mannosyl-3-phosphogly 96.8 0.02 4.3E-07 52.4 11.5 74 156-235 152-251 (302)
155 KOG3040 Predicted sugar phosph 96.7 0.0015 3.2E-08 56.7 3.7 51 189-243 181-232 (262)
156 TIGR01497 kdpB K+-transporting 96.7 0.006 1.3E-07 61.8 8.4 86 139-240 446-535 (675)
157 TIGR01680 Veg_Stor_Prot vegeta 96.6 0.027 5.8E-07 51.0 10.8 80 137-222 143-238 (275)
158 PRK14010 potassium-transportin 96.6 0.012 2.7E-07 59.6 9.4 87 139-241 441-531 (673)
159 TIGR01484 HAD-SF-IIB HAD-super 96.5 0.003 6.6E-08 53.7 3.9 40 190-233 163-202 (204)
160 TIGR00685 T6PP trehalose-phosp 96.4 0.0039 8.5E-08 55.1 4.5 51 190-240 167-220 (244)
161 PRK01122 potassium-transportin 96.4 0.013 2.9E-07 59.4 8.6 87 139-241 445-535 (679)
162 PF11019 DUF2608: Protein of u 96.3 0.036 7.7E-07 49.6 9.7 100 142-242 84-214 (252)
163 COG2217 ZntA Cation transport 96.1 0.02 4.4E-07 58.3 8.3 94 138-246 536-632 (713)
164 PTZ00174 phosphomannomutase; P 96.0 0.0033 7.2E-08 55.7 1.7 48 190-248 188-239 (247)
165 TIGR01452 PGP_euk phosphoglyco 96.0 0.052 1.1E-06 48.9 9.5 72 138-215 17-94 (279)
166 COG5663 Uncharacterized conser 96.0 0.026 5.6E-07 47.5 6.6 89 140-243 73-167 (194)
167 PF13344 Hydrolase_6: Haloacid 95.9 0.026 5.6E-07 43.3 6.2 71 138-215 13-89 (101)
168 COG3700 AphA Acid phosphatase 95.7 0.043 9.3E-07 46.7 6.9 95 131-235 106-209 (237)
169 TIGR01524 ATPase-IIIB_Mg magne 95.3 0.066 1.4E-06 56.0 8.5 93 138-239 514-628 (867)
170 PF03031 NIF: NLI interacting 95.2 0.0074 1.6E-07 49.5 1.0 79 139-220 36-120 (159)
171 TIGR01647 ATPase-IIIA_H plasma 95.1 0.057 1.2E-06 55.6 7.3 86 138-231 441-555 (755)
172 PRK15122 magnesium-transportin 95.1 0.11 2.3E-06 54.7 9.2 93 138-239 549-663 (903)
173 PLN02499 glycerol-3-phosphate 95.1 0.26 5.7E-06 48.1 11.1 65 109-187 75-139 (498)
174 TIGR01523 ATPase-IID_K-Na pota 95.0 0.13 2.7E-06 55.0 9.4 98 139-244 646-776 (1053)
175 PRK10517 magnesium-transportin 94.8 0.11 2.5E-06 54.5 8.7 93 138-239 549-663 (902)
176 TIGR01517 ATPase-IIB_Ca plasma 94.5 0.18 4E-06 53.1 9.4 89 139-239 579-694 (941)
177 TIGR01689 EcbF-BcbF capsule bi 94.5 0.021 4.6E-07 45.8 1.9 15 2-16 1-15 (126)
178 cd04728 ThiG Thiazole synthase 94.4 0.56 1.2E-05 41.8 10.7 102 138-249 103-219 (248)
179 TIGR01681 HAD-SF-IIIC HAD-supe 94.3 0.049 1.1E-06 43.3 3.6 14 3-16 1-14 (128)
180 TIGR01494 ATPase_P-type ATPase 94.3 0.18 3.8E-06 49.2 8.1 75 138-224 346-424 (499)
181 TIGR01106 ATPase-IIC_X-K sodiu 94.2 0.28 6E-06 52.2 9.9 38 139-177 568-608 (997)
182 PF08282 Hydrolase_3: haloacid 94.2 0.049 1.1E-06 46.6 3.6 53 190-250 186-238 (254)
183 KOG0207 Cation transport ATPas 93.7 0.23 5E-06 51.4 7.8 88 139-242 723-814 (951)
184 COG2503 Predicted secreted aci 93.5 0.34 7.4E-06 43.2 7.5 81 137-222 120-209 (274)
185 COG0647 NagD Predicted sugar p 93.3 0.55 1.2E-05 42.5 8.8 50 137-186 22-77 (269)
186 PRK00208 thiG thiazole synthas 93.0 3.1 6.7E-05 37.2 12.9 102 138-249 103-219 (250)
187 KOG2630 Enolase-phosphatase E- 92.7 0.64 1.4E-05 41.1 7.9 103 126-236 111-223 (254)
188 TIGR01484 HAD-SF-IIB HAD-super 92.6 0.056 1.2E-06 45.9 1.3 14 4-17 1-14 (204)
189 PRK09484 3-deoxy-D-manno-octul 92.3 0.067 1.5E-06 45.2 1.4 15 2-16 21-35 (183)
190 TIGR01456 CECR5 HAD-superfamil 92.2 0.095 2.1E-06 48.3 2.4 27 4-31 2-28 (321)
191 TIGR01656 Histidinol-ppas hist 92.2 0.077 1.7E-06 43.0 1.6 16 3-18 1-16 (147)
192 PRK00192 mannosyl-3-phosphogly 92.0 0.29 6.4E-06 43.7 5.3 46 139-185 21-69 (273)
193 PF03031 NIF: NLI interacting 92.0 0.064 1.4E-06 43.8 0.9 16 3-18 1-16 (159)
194 TIGR01684 viral_ppase viral ph 91.9 0.099 2.1E-06 47.9 2.1 30 2-31 126-158 (301)
195 TIGR01664 DNA-3'-Pase DNA 3'-p 91.7 0.096 2.1E-06 43.7 1.6 16 2-17 13-28 (166)
196 cd01427 HAD_like Haloacid deha 91.5 0.079 1.7E-06 40.5 0.9 16 4-19 1-16 (139)
197 PHA03398 viral phosphatase sup 91.4 0.12 2.5E-06 47.5 1.9 19 2-20 128-146 (303)
198 TIGR01457 HAD-SF-IIA-hyp2 HAD- 91.1 0.38 8.3E-06 42.6 5.0 48 138-186 16-69 (249)
199 TIGR01670 YrbI-phosphatas 3-de 90.9 0.1 2.2E-06 42.8 1.1 14 3-16 2-15 (154)
200 COG4030 Uncharacterized protei 90.8 0.47 1E-05 42.0 5.1 38 138-176 82-121 (315)
201 PRK10444 UMP phosphatase; Prov 90.6 2.7 5.9E-05 37.3 10.0 48 139-186 17-69 (248)
202 TIGR01460 HAD-SF-IIA Haloacid 89.9 6.3 0.00014 34.5 11.6 71 138-214 13-89 (236)
203 COG0474 MgtA Cation transport 89.6 1.5 3.2E-05 46.4 8.6 90 138-232 546-660 (917)
204 PF08645 PNK3P: Polynucleotide 89.6 0.17 3.8E-06 42.0 1.4 16 3-18 1-16 (159)
205 PRK10187 trehalose-6-phosphate 89.3 0.22 4.8E-06 44.7 1.9 35 190-224 174-208 (266)
206 TIGR01458 HAD-SF-IIA-hyp3 HAD- 89.2 0.37 8.1E-06 42.9 3.3 46 139-185 21-72 (257)
207 PF05822 UMPH-1: Pyrimidine 5' 89.0 3.9 8.4E-05 36.6 9.6 85 138-224 89-197 (246)
208 TIGR01652 ATPase-Plipid phosph 88.6 2.7 5.8E-05 45.1 9.7 39 138-177 630-671 (1057)
209 TIGR01657 P-ATPase-V P-type AT 88.5 2.6 5.6E-05 45.2 9.5 39 138-177 655-696 (1054)
210 COG3882 FkbH Predicted enzyme 88.1 2.2 4.7E-05 41.7 7.7 69 150-224 269-345 (574)
211 PF12689 Acid_PPase: Acid Phos 88.0 0.29 6.2E-06 41.3 1.6 17 2-18 3-19 (169)
212 TIGR02245 HAD_IIID1 HAD-superf 88.0 3 6.5E-05 36.0 7.9 89 142-239 48-156 (195)
213 TIGR00685 T6PP trehalose-phosp 87.9 0.26 5.6E-06 43.5 1.4 33 164-198 170-202 (244)
214 TIGR02726 phenyl_P_delta pheny 86.3 0.34 7.3E-06 40.7 1.2 49 164-222 85-133 (169)
215 COG2216 KdpB High-affinity K+ 86.2 1.9 4.2E-05 42.5 6.3 78 139-224 447-527 (681)
216 PF13344 Hydrolase_6: Haloacid 85.1 0.47 1E-05 36.2 1.4 19 5-23 1-19 (101)
217 smart00577 CPDc catalytic doma 85.1 0.52 1.1E-05 38.3 1.7 16 3-18 3-18 (148)
218 PRK10187 trehalose-6-phosphate 85.1 2.5 5.4E-05 37.9 6.2 46 164-215 177-222 (266)
219 PRK11840 bifunctional sulfur c 84.7 15 0.00032 34.3 11.1 121 111-245 148-286 (326)
220 PF06189 5-nucleotidase: 5'-nu 84.2 2.7 5.9E-05 37.8 5.9 78 150-242 184-263 (264)
221 KOG0202 Ca2+ transporting ATPa 83.8 4.2 9.2E-05 42.2 7.7 98 139-244 584-708 (972)
222 TIGR01658 EYA-cons_domain eyes 82.9 14 0.00031 33.2 9.8 81 153-239 177-259 (274)
223 TIGR02245 HAD_IIID1 HAD-superf 82.9 0.65 1.4E-05 40.0 1.4 15 3-17 22-36 (195)
224 CHL00162 thiG thiamin biosynth 82.7 18 0.00039 32.6 10.4 97 138-244 117-225 (267)
225 COG0761 lytB 4-Hydroxy-3-methy 82.6 4.9 0.00011 36.7 6.9 81 155-248 195-275 (294)
226 TIGR00213 GmhB_yaeD D,D-heptos 82.5 0.68 1.5E-05 38.6 1.4 13 3-15 2-14 (176)
227 TIGR02463 MPGP_rel mannosyl-3- 82.3 2.6 5.7E-05 36.0 5.0 36 141-177 18-56 (221)
228 TIGR02461 osmo_MPG_phos mannos 82.2 2.7 5.8E-05 36.6 5.1 40 139-179 15-57 (225)
229 COG1778 Low specificity phosph 82.0 0.75 1.6E-05 38.4 1.4 17 1-17 7-23 (170)
230 KOG2469 IMP-GMP specific 5'-nu 82.0 2.9 6.4E-05 39.8 5.5 84 150-236 212-332 (424)
231 PRK12702 mannosyl-3-phosphogly 80.4 2.9 6.4E-05 38.4 4.8 40 139-179 18-60 (302)
232 PLN02205 alpha,alpha-trehalose 79.9 1.7 3.6E-05 45.6 3.4 35 190-224 762-799 (854)
233 PRK14501 putative bifunctional 79.8 1.5 3.3E-05 44.9 3.1 33 190-224 657-689 (726)
234 PLN03017 trehalose-phosphatase 79.8 1.1 2.4E-05 42.4 1.9 34 190-223 283-319 (366)
235 COG1877 OtsB Trehalose-6-phosp 79.3 1 2.2E-05 40.7 1.5 84 138-223 121-215 (266)
236 PLN02151 trehalose-phosphatase 79.0 1.2 2.6E-05 41.9 1.9 34 190-223 269-305 (354)
237 KOG2470 Similar to IMP-GMP spe 78.4 2.7 5.9E-05 39.5 4.0 69 150-218 254-358 (510)
238 PTZ00174 phosphomannomutase; P 77.9 4 8.7E-05 35.9 4.8 29 3-31 6-34 (247)
239 TIGR01261 hisB_Nterm histidino 77.8 1.4 2.9E-05 36.6 1.7 16 3-18 2-17 (161)
240 PLN03190 aminophospholipid tra 77.3 16 0.00034 39.9 9.9 34 138-171 725-761 (1178)
241 TIGR01663 PNK-3'Pase polynucle 77.1 1.4 3E-05 43.7 1.7 15 3-17 169-183 (526)
242 COG4996 Predicted phosphatase 75.5 1.5 3.3E-05 35.7 1.3 16 3-18 1-16 (164)
243 PLN02580 trehalose-phosphatase 75.0 1.6 3.4E-05 41.6 1.5 35 190-224 301-338 (384)
244 PRK10513 sugar phosphate phosp 73.6 9.2 0.0002 33.6 6.0 44 140-184 21-67 (270)
245 TIGR02251 HIF-SF_euk Dullard-l 73.4 2.1 4.5E-05 35.4 1.7 15 3-17 2-16 (162)
246 TIGR01487 SPP-like sucrose-pho 73.2 6.2 0.00013 33.6 4.7 40 139-179 18-60 (215)
247 PF02358 Trehalose_PPase: Treh 73.1 2.5 5.4E-05 36.9 2.2 45 180-224 148-202 (235)
248 PRK06769 hypothetical protein; 72.8 2.2 4.8E-05 35.5 1.7 12 3-14 5-16 (173)
249 KOG2134 Polynucleotide kinase 72.5 2 4.3E-05 40.8 1.5 19 3-21 76-94 (422)
250 PRK01158 phosphoglycolate phos 70.9 8 0.00017 33.0 4.9 39 140-179 21-62 (230)
251 COG3769 Predicted hydrolase (H 70.1 2.5 5.5E-05 37.3 1.5 112 109-222 100-225 (274)
252 PF08282 Hydrolase_3: haloacid 69.4 6.4 0.00014 33.3 3.9 38 139-177 15-55 (254)
253 COG4850 Uncharacterized conser 69.3 20 0.00044 33.5 7.2 81 137-220 194-292 (373)
254 TIGR00099 Cof-subfamily Cof su 68.4 8.1 0.00018 33.8 4.4 35 143-178 20-57 (256)
255 PF09419 PGP_phosphatase: Mito 67.8 5.9 0.00013 33.3 3.3 13 2-14 41-53 (168)
256 TIGR01486 HAD-SF-IIB-MPGP mann 67.7 11 0.00025 33.0 5.3 38 140-178 17-57 (256)
257 PRK15126 thiamin pyrimidine py 67.6 10 0.00023 33.5 5.0 40 139-179 19-61 (272)
258 PRK10530 pyridoxal phosphate ( 65.8 12 0.00026 32.8 5.0 40 139-179 20-62 (272)
259 KOG0323 TFIIF-interacting CTD 65.0 8.1 0.00018 39.1 4.1 52 137-189 199-254 (635)
260 PF05152 DUF705: Protein of un 64.9 15 0.00033 33.6 5.5 46 140-186 143-191 (297)
261 TIGR01485 SPP_plant-cyano sucr 64.1 13 0.00029 32.4 5.0 42 142-185 24-68 (249)
262 KOG2882 p-Nitrophenyl phosphat 64.1 9.9 0.00022 35.0 4.1 39 133-172 33-74 (306)
263 TIGR02471 sucr_syn_bact_C sucr 63.8 15 0.00033 31.7 5.2 34 150-185 28-61 (236)
264 TIGR01482 SPP-subfamily Sucros 63.4 13 0.00028 31.5 4.7 39 139-178 15-56 (225)
265 COG5610 Predicted hydrolase (H 62.9 27 0.00059 34.2 7.0 94 137-235 95-200 (635)
266 PRK10976 putative hydrolase; P 62.2 11 0.00024 33.1 4.1 29 150-179 33-61 (266)
267 COG0561 Cof Predicted hydrolas 62.1 14 0.0003 32.4 4.8 39 139-178 20-61 (264)
268 PF05690 ThiG: Thiazole biosyn 61.0 42 0.00091 30.0 7.3 92 138-239 103-206 (247)
269 PRK05446 imidazole glycerol-ph 60.4 5.6 0.00012 37.4 2.0 31 228-258 307-337 (354)
270 PRK03669 mannosyl-3-phosphogly 60.3 17 0.00037 32.2 5.0 37 140-177 25-64 (271)
271 TIGR02250 FCP1_euk FCP1-like p 59.8 5.5 0.00012 32.9 1.6 21 3-23 7-27 (156)
272 TIGR01668 YqeG_hyp_ppase HAD s 59.7 5.4 0.00012 33.1 1.6 14 3-16 26-39 (170)
273 PLN03064 alpha,alpha-trehalose 59.0 5 0.00011 42.5 1.5 14 3-16 592-605 (934)
274 KOG0206 P-type ATPase [General 57.5 1.7E+02 0.0037 32.1 12.4 38 138-176 650-690 (1151)
275 PLN03063 alpha,alpha-trehalose 57.3 5.4 0.00012 41.6 1.4 36 180-215 661-709 (797)
276 TIGR01686 FkbH FkbH-like domai 57.1 6.3 0.00014 36.2 1.7 16 2-17 3-18 (320)
277 PF06014 DUF910: Bacterial pro 56.9 7.6 0.00016 27.3 1.6 25 195-223 7-31 (62)
278 COG4018 Uncharacterized protei 56.1 28 0.0006 32.8 5.6 64 193-256 209-272 (505)
279 KOG3128 Uncharacterized conser 55.7 1.6E+02 0.0035 26.7 10.6 83 141-224 140-246 (298)
280 KOG2961 Predicted hydrolase (H 55.2 14 0.00031 30.8 3.3 53 191-247 123-177 (190)
281 TIGR03609 S_layer_CsaB polysac 55.0 1.2E+02 0.0026 27.0 9.7 73 150-239 203-278 (298)
282 PRK15424 propionate catabolism 52.8 78 0.0017 31.6 8.6 91 144-250 96-189 (538)
283 PRK00994 F420-dependent methyl 52.2 90 0.0019 28.0 7.9 65 150-217 29-98 (277)
284 TIGR02329 propionate_PrpR prop 52.0 75 0.0016 31.6 8.3 84 144-239 86-172 (526)
285 COG2022 ThiG Uncharacterized e 51.5 1.8E+02 0.0039 26.0 11.0 91 138-238 110-212 (262)
286 PF04413 Glycos_transf_N: 3-De 51.1 38 0.00082 28.7 5.4 78 134-219 100-184 (186)
287 TIGR01286 nifK nitrogenase mol 50.1 2.4E+02 0.0052 28.0 11.5 60 191-260 425-498 (515)
288 PRK14501 putative bifunctional 49.9 22 0.00047 36.6 4.4 13 3-15 493-505 (726)
289 TIGR01689 EcbF-BcbF capsule bi 49.8 43 0.00093 26.7 5.2 47 138-186 23-87 (126)
290 PF10113 Fibrillarin_2: Fibril 49.3 44 0.00095 32.3 5.9 65 193-257 209-275 (505)
291 COG0731 Fe-S oxidoreductases [ 47.4 43 0.00092 30.8 5.4 42 136-184 89-134 (296)
292 PF04028 DUF374: Domain of unk 46.7 1.1E+02 0.0023 22.1 6.5 54 157-216 16-69 (74)
293 KOG4549 Magnesium-dependent ph 46.3 94 0.002 25.2 6.5 79 138-218 43-134 (144)
294 PLN02580 trehalose-phosphatase 45.8 23 0.00049 33.8 3.5 73 159-253 300-376 (384)
295 PF08235 LNS2: LNS2 (Lipin/Ned 45.7 11 0.00024 31.4 1.2 13 4-16 1-13 (157)
296 COG4502 5'(3')-deoxyribonucleo 44.9 9.1 0.0002 31.6 0.6 50 137-187 66-123 (180)
297 PRK13762 tRNA-modifying enzyme 44.4 1.7E+02 0.0038 27.0 9.1 29 136-164 139-170 (322)
298 COG0241 HisB Histidinol phosph 43.9 14 0.00029 31.6 1.5 17 3-19 6-22 (181)
299 PRK01045 ispH 4-hydroxy-3-meth 43.4 96 0.0021 28.5 7.1 83 154-249 192-274 (298)
300 PF07085 DRTGG: DRTGG domain; 42.6 55 0.0012 24.6 4.7 42 206-251 40-82 (105)
301 KOG0203 Na+/K+ ATPase, alpha s 40.9 85 0.0019 33.2 6.8 104 139-250 590-742 (1019)
302 PF08235 LNS2: LNS2 (Lipin/Ned 39.3 1.9E+02 0.0041 24.0 7.6 88 139-232 27-141 (157)
303 PHA02530 pseT polynucleotide k 38.9 20 0.00042 32.1 1.9 15 3-17 159-173 (300)
304 COG2179 Predicted hydrolase of 38.5 17 0.00038 30.7 1.3 12 3-14 29-40 (175)
305 PF05152 DUF705: Protein of un 38.0 21 0.00046 32.6 1.9 16 2-17 122-137 (297)
306 KOG0204 Calcium transporting A 37.6 1.7E+02 0.0037 31.1 8.4 82 139-224 647-756 (1034)
307 KOG3189 Phosphomannomutase [Li 37.5 23 0.0005 31.0 1.9 28 4-31 13-40 (252)
308 PRK14502 bifunctional mannosyl 37.2 54 0.0012 33.7 4.8 38 140-178 434-474 (694)
309 TIGR00216 ispH_lytB (E)-4-hydr 37.1 1.1E+02 0.0023 28.0 6.3 83 154-249 190-272 (280)
310 PRK12360 4-hydroxy-3-methylbut 37.0 1.2E+02 0.0025 27.7 6.6 83 154-249 191-273 (281)
311 PF03808 Glyco_tran_WecB: Glyc 36.5 72 0.0016 26.5 4.8 18 229-246 100-117 (172)
312 TIGR00236 wecB UDP-N-acetylglu 36.4 1.4E+02 0.003 27.3 7.2 82 155-240 32-120 (365)
313 KOG2134 Polynucleotide kinase 36.4 73 0.0016 30.6 5.2 87 139-233 104-229 (422)
314 PF08620 RPAP1_C: RPAP1-like, 36.2 13 0.00028 27.0 0.2 10 5-14 3-12 (73)
315 PRK10494 hypothetical protein; 35.8 28 0.00061 31.2 2.4 53 190-242 137-190 (259)
316 PLN02205 alpha,alpha-trehalose 35.5 40 0.00086 35.6 3.7 29 1-29 595-630 (854)
317 COG2121 Uncharacterized protei 35.1 2.3E+02 0.005 24.8 7.7 78 154-241 70-157 (214)
318 COG5083 SMP2 Uncharacterized p 34.4 21 0.00045 34.7 1.3 15 3-17 376-390 (580)
319 COG1927 Mtd Coenzyme F420-depe 33.5 2.6E+02 0.0057 24.7 7.8 79 150-236 29-115 (277)
320 PTZ00445 p36-lilke protein; Pr 33.4 18 0.00038 31.8 0.6 13 3-15 44-56 (219)
321 PLN02887 hydrolase family prot 33.3 1E+02 0.0022 31.1 6.0 38 139-177 325-365 (580)
322 KOG3217 Protein tyrosine phosp 33.1 66 0.0014 26.6 3.8 70 136-215 52-121 (159)
323 KOG3107 Predicted haloacid deh 33.1 1.3E+02 0.0029 28.8 6.3 77 154-237 372-451 (468)
324 KOG2832 TFIIF-interacting CTD 32.5 93 0.002 29.6 5.2 73 139-213 214-290 (393)
325 KOG1605 TFIIF-interacting CTD 32.3 27 0.00059 31.5 1.6 103 138-246 130-236 (262)
326 COG1058 CinA Predicted nucleot 31.9 1.1E+02 0.0023 27.6 5.4 57 190-247 21-77 (255)
327 KOG1123 RNA polymerase II tran 31.7 4.2E+02 0.009 26.8 9.6 88 150-254 541-632 (776)
328 PF06506 PrpR_N: Propionate ca 31.5 82 0.0018 26.1 4.4 91 150-259 75-170 (176)
329 cd01994 Alpha_ANH_like_IV This 30.0 1.7E+02 0.0038 24.8 6.2 84 162-249 46-132 (194)
330 PF06117 DUF957: Enterobacteri 29.9 80 0.0017 22.2 3.3 30 1-31 23-52 (65)
331 PF13580 SIS_2: SIS domain; PD 29.7 58 0.0013 25.9 3.0 87 150-237 33-137 (138)
332 TIGR03278 methan_mark_10 putat 29.6 2.5E+02 0.0054 26.9 7.8 39 138-178 85-131 (404)
333 cd01615 CIDE_N CIDE_N domain, 29.0 30 0.00066 25.4 1.1 15 4-18 42-56 (78)
334 PF09269 DUF1967: Domain of un 28.6 61 0.0013 22.9 2.6 24 194-217 44-67 (69)
335 PF02358 Trehalose_PPase: Treh 28.2 64 0.0014 27.9 3.3 49 164-216 168-219 (235)
336 cd06537 CIDE_N_B CIDE_N domain 28.2 32 0.0007 25.4 1.2 15 4-18 41-55 (81)
337 smart00266 CAD Domains present 27.7 33 0.00072 24.9 1.1 15 4-18 40-54 (74)
338 cd06539 CIDE_N_A CIDE_N domain 27.4 34 0.00074 25.1 1.2 15 4-18 42-56 (78)
339 TIGR03679 arCOG00187 arCOG0018 26.5 4.2E+02 0.0091 22.8 8.1 83 162-247 44-129 (218)
340 PRK00087 4-hydroxy-3-methylbut 26.5 1.7E+02 0.0036 29.8 6.3 83 154-249 188-270 (647)
341 cd06536 CIDE_N_ICAD CIDE_N dom 26.1 37 0.00079 25.1 1.1 15 4-18 44-58 (80)
342 PRK00994 F420-dependent methyl 26.1 2.4E+02 0.0052 25.4 6.4 73 110-186 43-123 (277)
343 PF02017 CIDE-N: CIDE-N domain 25.9 36 0.00079 25.0 1.1 15 4-18 42-56 (78)
344 TIGR02468 sucrsPsyn_pln sucros 25.7 1.2E+02 0.0027 32.8 5.3 56 162-220 922-988 (1050)
345 cd00452 KDPG_aldolase KDPG and 25.4 3.9E+02 0.0085 22.2 7.6 67 153-236 56-123 (190)
346 PF07279 DUF1442: Protein of u 25.3 4.7E+02 0.01 23.0 11.1 96 142-247 27-133 (218)
347 COG4825 Uncharacterized membra 25.3 4E+02 0.0087 24.8 7.8 84 142-239 169-254 (395)
348 PRK10076 pyruvate formate lyas 25.2 1.9E+02 0.0042 25.0 5.7 62 110-171 19-88 (213)
349 PF08303 tRNA_lig_kinase: tRNA 25.1 3.2E+02 0.0069 23.1 6.7 81 157-242 5-102 (168)
350 TIGR02244 HAD-IG-Ncltidse HAD 24.7 37 0.0008 31.9 1.2 16 3-18 13-28 (343)
351 COG3882 FkbH Predicted enzyme 24.0 41 0.00089 33.2 1.4 52 193-252 490-541 (574)
352 PF06901 FrpC: RTX iron-regula 24.0 39 0.00084 29.3 1.0 19 3-21 59-77 (271)
353 TIGR03595 Obg_CgtA_exten Obg f 23.9 90 0.002 22.1 2.8 23 195-217 45-67 (69)
354 cd06533 Glyco_transf_WecG_TagA 23.9 1.7E+02 0.0037 24.2 5.0 18 229-246 98-115 (171)
355 TIGR01278 DPOR_BchB light-inde 23.5 5.1E+02 0.011 25.4 9.0 59 191-259 352-417 (511)
356 TIGR03599 YloV DAK2 domain fus 23.5 4.9E+02 0.011 25.9 8.8 93 153-257 313-407 (530)
357 PRK08304 stage V sporulation p 23.2 81 0.0018 29.6 3.1 62 176-237 34-108 (337)
358 PRK09545 znuA high-affinity zi 22.7 2.2E+02 0.0048 26.0 5.9 72 165-240 212-286 (311)
359 TIGR01282 nifD nitrogenase mol 22.0 7.4E+02 0.016 24.1 9.8 97 147-260 353-451 (466)
360 PF04007 DUF354: Protein of un 22.0 2.6E+02 0.0056 26.1 6.2 89 137-238 12-111 (335)
361 PRK12404 stage V sporulation p 21.8 41 0.0009 31.4 0.9 61 176-236 32-105 (334)
362 COG3769 Predicted hydrolase (H 21.8 1.1E+02 0.0023 27.4 3.3 15 1-15 6-20 (274)
363 PF14544 DUF4443: Domain of un 21.7 95 0.0021 24.2 2.7 29 232-261 79-107 (108)
364 cd06538 CIDE_N_FSP27 CIDE_N do 21.6 50 0.0011 24.3 1.1 15 4-18 41-55 (79)
365 COG4483 Uncharacterized protei 21.6 84 0.0018 22.3 2.2 25 195-223 7-31 (68)
366 KOG1495 Lactate dehydrogenase 21.5 4.6E+02 0.0099 24.3 7.3 82 140-224 116-205 (332)
367 PF00532 Peripla_BP_1: Peripla 21.2 2.7E+02 0.0058 24.7 6.0 60 140-201 19-78 (279)
368 PF10307 DUF2410: Hypothetical 20.8 5.5E+02 0.012 22.1 8.3 77 142-222 57-149 (197)
369 TIGR03470 HpnH hopanoid biosyn 20.8 5.3E+02 0.011 23.5 8.0 102 137-241 82-202 (318)
370 PF04230 PS_pyruv_trans: Polys 20.7 1.7E+02 0.0037 24.6 4.5 39 191-239 247-285 (286)
371 PF02350 Epimerase_2: UDP-N-ac 20.4 2.1E+02 0.0045 26.6 5.3 80 155-239 12-100 (346)
372 PRK03692 putative UDP-N-acetyl 20.3 2.1E+02 0.0045 25.4 5.0 83 154-247 84-174 (243)
373 PRK03692 putative UDP-N-acetyl 20.0 4.5E+02 0.0097 23.3 7.1 60 150-215 103-166 (243)
No 1
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=100.00 E-value=1.7e-38 Score=277.23 Aligned_cols=204 Identities=25% Similarity=0.245 Sum_probs=165.3
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.+.|+|||||||+||.+.+..+++++++++ |+++. ..+.++.+||.|.+.++. +.+...
T Consensus 3 ~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~ig~~~~~~~~-~~~~~~------ 62 (220)
T COG0546 3 MIKAILFDLDGTLVDSAEDILRAFNAALAEL------GLPPL-------DEEEIRQLIGLGLDELIE-RLLGEA------ 62 (220)
T ss_pred CCCEEEEeCCCccccChHHHHHHHHHHHHHc------CCCCC-------CHHHHHHHhcCCHHHHHH-HHhccc------
Confidence 4589999999999999999999999999999 44432 246899999999887663 333110
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.. +...+..+.++++|.+.|.+.. .+++||||.++|+ ++|++++|
T Consensus 63 --------~~----------------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i 110 (220)
T COG0546 63 --------DE----------------------EAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGI 110 (220)
T ss_pred --------cc----------------------hhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEE
Confidence 00 0011345566667776666655 5789999999999 89999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+|||++..++.+|++ +|+..||+.++|.+ .||+|+++..+++++|.+|++++|||||.+||++|++ ||+++
T Consensus 111 ~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~----Ag~~~ 185 (220)
T COG0546 111 VTNKPERELDILLKA-LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKA----AGVPA 185 (220)
T ss_pred EeCCcHHHHHHHHHH-hCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHH----cCCCE
Confidence 999999999999995 99999999999944 3599999999999999998899999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++|+|||++.+++. ...|..+++++.+|
T Consensus 186 v~v~~g~~~~~~l~-~~~~d~vi~~~~el 213 (220)
T COG0546 186 VGVTWGYNSREELA-QAGADVVIDSLAEL 213 (220)
T ss_pred EEEECCCCCCcchh-hcCCCEEECCHHHH
Confidence 99999998444444 66777777776654
No 2
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=6.6e-35 Score=255.74 Aligned_cols=203 Identities=19% Similarity=0.129 Sum_probs=159.3
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.++|+|||||||+||.+.+..+++.+++++ |++.. ..+.++..+|.|.+..+. ..+ .
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~-------~~~~~~~~~g~~~~~~~~-~~~-~------- 68 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAAR------GRAPI-------TLAQLRPVVSKGARAMLA-VAF-P------- 68 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHC------CCCCC-------CHHHHHHHhhhHHHHHHH-HHh-c-------
Confidence 7899999999999999999999999999999 44422 135677788887665431 111 0
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
. ++++..++....+++.|.+. .....++|||+.++|+ ++|++++|
T Consensus 69 ------~----------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~~~L~~L~~~g~~l~i 116 (229)
T PRK13226 69 ------E----------------------LDAAARDALIPEFLQRYEAL----IGTQSQLFDGVEGMLQRLECAGCVWGI 116 (229)
T ss_pred ------c----------------------CChHHHHHHHHHHHHHHHHh----hhhcCeeCCCHHHHHHHHHHCCCeEEE
Confidence 0 01112223334445554433 2334689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||++...+..+|++ +|+..+|+.+++++ .||+|+++.++++++|++|++|+||||+.+|+++|++ +|+++
T Consensus 117 ~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~----aG~~~ 191 (229)
T PRK13226 117 VTNKPEYLARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARA----AGMPS 191 (229)
T ss_pred ECCCCHHHHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHH----CCCcE
Confidence 999999999999995 99999999999865 2599999999999999999999999999999999997 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|+|+||++...+......|..+++++.+|
T Consensus 192 i~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (229)
T PRK13226 192 VAALWGYRLHDDDPLAWQADVLVEQPQLL 220 (229)
T ss_pred EEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence 99999998554444457788888887765
No 3
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=100.00 E-value=2.4e-33 Score=242.42 Aligned_cols=196 Identities=14% Similarity=0.059 Sum_probs=148.6
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.++|+|||||||+||.+.+..+.+.++++++ .+..+ .++++.++|......+ ..+
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~------~~~~~-------~~~~~~~~G~~~~~~~--~~~--------- 57 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYY------PNQYK-------REDVLPFIGPSLHDTF--SKI--------- 57 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhC------CCCCC-------HHHHHHHhCcCHHHHH--Hhc---------
Confidence 35899999999999999999999999999983 22111 1345566665533221 100
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.++..++....++..+. .......++|||+.++|+ ++|++++|
T Consensus 58 ------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~l~~L~~~g~~~~i 103 (214)
T PRK13288 58 ------------------------------DESKVEEMITTYREFNH----EHHDELVTEYETVYETLKTLKKQGYKLGI 103 (214)
T ss_pred ------------------------------CHHHHHHHHHHHHHHHH----HhhhhhcccCcCHHHHHHHHHHCCCeEEE
Confidence 11112222333444332 223345689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||+++..+..+|+. +|+..||+.|+|++ .+|+|+++.+++++++.+|++++|||||.+|+++|++ +|+++
T Consensus 104 ~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~----aG~~~ 178 (214)
T PRK13288 104 VTTKMRDTVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKN----AGTKT 178 (214)
T ss_pred EeCCCHHHHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----CCCeE
Confidence 999999999999996 99999999999975 2599999999999999999999999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMD 260 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~ 260 (263)
|+|.||+++++++.+ ..+..++.++.
T Consensus 179 i~v~~g~~~~~~l~~-~~~~~~i~~~~ 204 (214)
T PRK13288 179 AGVAWTIKGREYLEQ-YKPDFMLDKMS 204 (214)
T ss_pred EEEcCCCCCHHHHhh-cCcCEEECCHH
Confidence 999999998887753 33444444443
No 4
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=100.00 E-value=2e-32 Score=242.79 Aligned_cols=211 Identities=13% Similarity=0.020 Sum_probs=155.5
Q ss_pred cEEEEecCcccccCHH-HHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 3 DLYALDFDGVICDSCE-ETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~-di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
++|+|||||||+||.. .+..+++.+++++ |++. + .++++..+|.+....+. ..+ .
T Consensus 3 k~viFD~DGTLiDs~~~~~~~a~~~~~~~~------g~~~-~-------~~~~~~~~G~~~~~~~~-~~~-~-------- 58 (253)
T TIGR01422 3 EAVIFDWAGTTVDFGSFAPTQAFVEAFAEF------GVQI-T-------LEEARGPMGLGKWDHIR-ALL-K-------- 58 (253)
T ss_pred eEEEEeCCCCeecCCCccHHHHHHHHHHHc------CCCc-c-------HHHHHHhcCccHHHHHH-HHh-c--------
Confidence 7899999999999964 3467888899888 4431 1 23556667776544331 111 0
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhc--CCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~la 156 (263)
..+.. +.+.+.+| .+++.+++....|++.|.+. .....++|||+.++|+ ++|++++
T Consensus 59 --------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~e~L~~L~~~g~~l~ 119 (253)
T TIGR01422 59 --------MPAVA-------ERWRAKFGRLPTEADIEAIYEAFEPLQLAK----LAEYSSPIPGVIEVIAYLRARGIKIG 119 (253)
T ss_pred --------CHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HHhcCccCCCHHHHHHHHHHCCCeEE
Confidence 00111 11122222 23444455555555554432 2345789999999999 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCC-ceEEcCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhhHHHhhccCcCCC
Q 024758 157 IVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f-~~v~G~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
|+||+++..++.+|++ +|+..+| +.|+|++ .||+|+++..+++++|+. |++|+|||||.+|+++|++ ||
T Consensus 120 IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~----aG 194 (253)
T TIGR01422 120 STTGYTREMMDVVAPE-AALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRN----AG 194 (253)
T ss_pred EECCCcHHHHHHHHHH-HHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHH----CC
Confidence 9999999999999995 9999885 9999875 259999999999999995 9999999999999999998 99
Q ss_pred CcEEEEcCCCCC-----------------------hHHHHhhhhHhHHHhhhccc
Q 024758 231 WNLYLGNLFRFL-----------------------CHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 231 i~~v~v~wGy~~-----------------------~~~l~~~~~~~~~~~~~~~~ 262 (263)
+++|+|+||++. .++|. ..+|..|++++.+|
T Consensus 195 i~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~v~~~~~el 248 (253)
T TIGR01422 195 MWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLK-AAGAHYVIDTLAEL 248 (253)
T ss_pred CeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHH-hcCCCEehhcHHHH
Confidence 999999999973 23444 67898888888765
No 5
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=100.00 E-value=1.2e-32 Score=236.89 Aligned_cols=201 Identities=18% Similarity=0.206 Sum_probs=151.0
Q ss_pred EEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccccc
Q 024758 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSV 84 (263)
Q Consensus 5 vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~~~ 84 (263)
|+|||||||+||.+.+..+++.+++++ |.++.. .+.++.++|.+....+. +.+.. .
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~------~~~~~~-------~~~~~~~~g~~~~~~~~-~~~~~-~--------- 56 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAAL------GLPPAT-------LARVIGFIGNGVPVLME-RVLAW-A--------- 56 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhcccHHHHHH-HHhhc-c---------
Confidence 689999999999999999999999998 443221 24556667776544321 21110 0
Q ss_pred ccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCC
Q 024758 85 AEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSN 161 (263)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK 161 (263)
+. ..+.+..++....+.+.|. +......++|||+.++|+ ++|++++|+||+
T Consensus 57 --~~--------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~ 110 (213)
T TIGR01449 57 --GQ--------------------EPDAQRVAELRKLFDRHYE----EVAGELTSVFPGVEATLGALRAKGLRLGLVTNK 110 (213)
T ss_pred --cc--------------------ccChHHHHHHHHHHHHHHH----HhccccCccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 00 0112222233333344433 333445789999999999 789999999999
Q ss_pred chHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 162 QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
+...++.+|++ +|+..+|+.++|++ .||+|+++.++++++|++|++|+|||||.+|+++|++ ||+++|+|.
T Consensus 111 ~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~----aG~~~i~v~ 185 (213)
T TIGR01449 111 PTPLARPLLEL-LGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARA----AGCPSVLLT 185 (213)
T ss_pred CHHHHHHHHHH-cCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHH----CCCeEEEEc
Confidence 99999999995 99999999999975 2599999999999999999999999999999999998 999999999
Q ss_pred CCCCChHHHHhhhhHhHHHhhhcc
Q 024758 238 LFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 238 wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
||+++.+++.. ..|..++.++.+
T Consensus 186 ~g~~~~~~l~~-~~a~~~i~~~~~ 208 (213)
T TIGR01449 186 YGYRYGEAIDL-LPPDVLYDSLNE 208 (213)
T ss_pred cCCCCCcchhh-cCCCeEeCCHHH
Confidence 99988776653 356666665544
No 6
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=100.00 E-value=5.8e-32 Score=234.33 Aligned_cols=203 Identities=14% Similarity=0.079 Sum_probs=155.4
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhcccc-ccccchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRP-VVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~-~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+|||||||+||.+.+..+.+.+++++ |++.. .++... ++|.+...++ +.+.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~~g~~~~~~~--~~~~-------- 56 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAA------GLSPT--------PEEVQSAWMGQSKIEAI--RALL-------- 56 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHc------CCCCC--------HHHHHHhhcCCCHHHHH--HHHH--------
Confidence 378999999999999999999999999988 44321 122333 6776654433 2111
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
+.++.+++..++....+++.|.+.+.. ...++|||+.++|+ ++|++++|
T Consensus 57 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~G~~~~L~~L~~~g~~~~i 108 (220)
T TIGR03351 57 -------------------------ALDGADEAEAQAAFADFEERLAEAYDD---GPPVALPGAEEAFRSLRSSGIKVAL 108 (220)
T ss_pred -------------------------hccCCCHHHHHHHHHHHHHHHHHHhcc---cCCccCCCHHHHHHHHHHCCCEEEE
Confidence 111222233334444455555443322 24589999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCC--CCCceEEcCCC----CCcHHHHHHHHhhCCCC-CCcEEEEcCChhhHHHhhccCcCCC
Q 024758 158 VTSNQSRFVETLLRELAGVT--ITPDRLYGLGT----GPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~--~~f~~v~G~~~----~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
+||+....++.+|++ +|+. .+|+.+++++. ||+|+++..++++++++ |++|+||||+..|+++|++ +|
T Consensus 109 vT~~~~~~~~~~l~~-~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~----aG 183 (220)
T TIGR03351 109 TTGFDRDTAERLLEK-LGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGIN----AG 183 (220)
T ss_pred EeCCchHHHHHHHHH-hhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHH----CC
Confidence 999999999999995 9998 99999999752 49999999999999997 7999999999999999998 99
Q ss_pred CcE-EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 231 WNL-YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 231 i~~-v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+++ |+|.||+.+.+++. ...+..++.++++|
T Consensus 184 ~~~~i~~~~g~~~~~~~~-~~~~~~~i~~~~~l 215 (220)
T TIGR03351 184 AGAVVGVLTGAHDAEELS-RHPHTHVLDSVADL 215 (220)
T ss_pred CCeEEEEecCCCcHHHHh-hcCCceeecCHHHH
Confidence 999 99999998888775 45677777777654
No 7
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=100.00 E-value=3.3e-32 Score=241.51 Aligned_cols=203 Identities=12% Similarity=0.046 Sum_probs=148.1
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.++|+|||||||+||.+.+..+++.++++++.. .|.+ ... ....+.++|.+.+..+. ..+ .
T Consensus 21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~--~g~~-~~~------~~~~~~~~G~~~~~~~~-~~~-~------- 82 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFN--GGVP-ITE------EFFVENIAGKHNEDIAL-GLF-P------- 82 (248)
T ss_pred ccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccc--cCCC-CCH------HHHHHHcCCCCHHHHHH-HHc-C-------
Confidence 3489999999999999999999999999999311 0112 111 11245667776654331 111 0
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
. .. +...+....++..|.+. ......+|||+.++|+ ++|++++|
T Consensus 83 ------~-~~----------------------~~~~~~~~~~~~~y~~~----~~~~~~l~pgv~e~L~~L~~~g~~l~I 129 (248)
T PLN02770 83 ------D-DL----------------------ERGLKFTDDKEALFRKL----ASEQLKPLNGLYKLKKWIEDRGLKRAA 129 (248)
T ss_pred ------c-ch----------------------hhHHHHHHHHHHHHHHH----HHhcCCcCccHHHHHHHHHHcCCeEEE
Confidence 0 00 00011112233333332 2234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCCC----CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||+++..++..|++ +||..||+.|++++. ||+|+++..+++++|++|++|+||||+..|+++|++ ||+++
T Consensus 130 ~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~----aGi~~ 204 (248)
T PLN02770 130 VTNAPRENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVA----AGMPV 204 (248)
T ss_pred EeCCCHHHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHH----CCCEE
Confidence 999999999999995 999999999998762 599999999999999999999999999999999997 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
|+|.||+ ..+++. ...|..++.++.+
T Consensus 205 i~v~~g~-~~~~l~-~~~a~~vi~~~~e 230 (248)
T PLN02770 205 VGLTTRN-PESLLM-EAKPTFLIKDYED 230 (248)
T ss_pred EEEeCCC-CHHHHh-hcCCCEEeccchh
Confidence 9999996 455554 3456556555543
No 8
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.98 E-value=1.2e-31 Score=239.96 Aligned_cols=213 Identities=14% Similarity=0.037 Sum_probs=152.7
Q ss_pred CcEEEEecCcccccCHHH-HHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEE-TALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~d-i~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+|||||||+||... ...+++.+++++ |++. . .++++..+|.+....+ +.+..
T Consensus 4 ~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~------g~~~-~-------~~~~~~~~G~~~~~~~--~~~~~------- 60 (267)
T PRK13478 4 IQAVIFDWAGTTVDFGSFAPTQAFVEAFAQF------GVEI-T-------LEEARGPMGLGKWDHI--RALLK------- 60 (267)
T ss_pred eEEEEEcCCCCeecCCCccHHHHHHHHHHHc------CCCC-C-------HHHHHHhcCCCHHHHH--HHHHh-------
Confidence 489999999999999643 367888999888 4431 1 2345667776644332 11100
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcC--CHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (263)
..... ..+.+.+|. +++...+....+++.|.+. +.....+|||+.++|+ ++|+++
T Consensus 61 ---------~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~elL~~L~~~g~~l 120 (267)
T PRK13478 61 ---------MPRVA-------ARWQAVFGRLPTEADVDALYAAFEPLQIAK----LADYATPIPGVLEVIAALRARGIKI 120 (267)
T ss_pred ---------cHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HhhcCCCCCCHHHHHHHHHHCCCEE
Confidence 00000 111122222 2333444444555544332 3345689999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCC-CceEEcCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhhHHHhhccCcCC
Q 024758 156 YIVTSNQSRFVETLLRELAGVTIT-PDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELD 229 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~~~-f~~v~G~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~~~~A 229 (263)
+|+||+++..+..+|+. +|+..+ |+.|+|++ .||+|+++..+++++|+. +++|+|||||.+|+++|++ |
T Consensus 121 ~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~----a 195 (267)
T PRK13478 121 GSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLN----A 195 (267)
T ss_pred EEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHH----C
Confidence 99999999999999995 998877 48998875 249999999999999996 6999999999999999998 9
Q ss_pred CCcEEEEcCCCCC----h------------------HHHHhhhhHhHHHhhhccc
Q 024758 230 GWNLYLGNLFRFL----C------------------HILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 230 gi~~v~v~wGy~~----~------------------~~l~~~~~~~~~~~~~~~~ 262 (263)
|+++|+|+||++. . .+-+...+|..++.++.+|
T Consensus 196 G~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l 250 (267)
T PRK13478 196 GMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADL 250 (267)
T ss_pred CCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHH
Confidence 9999999999984 1 2334467888888888764
No 9
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.98 E-value=1.2e-31 Score=241.56 Aligned_cols=197 Identities=20% Similarity=0.122 Sum_probs=151.0
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.++++|||||||+||.+.+..+.+.+++++ |++..+ .+.++.++|...+.++ +.
T Consensus 62 ~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~~~~-------~~~~~~~~g~~~~~i~--~~----------- 115 (273)
T PRK13225 62 LQAIIFDFDGTLVDSLPTVVAIANAHAPDF------GYDPID-------ERDYAQLRQWSSRTIV--RR----------- 115 (273)
T ss_pred cCEEEECCcCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhCccHHHHH--HH-----------
Confidence 478999999999999999999999999998 443221 1334555554433221 11
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
++.+++..++....+++.|.. +....++|||+.++|+ ++|++++|+
T Consensus 116 --------------------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~pg~~e~L~~L~~~gi~laIv 164 (273)
T PRK13225 116 --------------------------AGLSPWQQARLLQRVQRQLGD-----CLPALQLFPGVADLLAQLRSRSLCLGIL 164 (273)
T ss_pred --------------------------cCCCHHHHHHHHHHHHHHHHh-----hcccCCcCCCHHHHHHHHHHCCCeEEEE
Confidence 122222223333444444322 2445789999999999 789999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
||+.+..++.+|++ +|+..+|+.|++.+. .+||+.+..++++++++|++|+||||+..|+++|++ ||+++|+|+
T Consensus 165 Sn~~~~~~~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~----AG~~~I~v~ 239 (273)
T PRK13225 165 SSNSRQNIEAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQ----VGLIAVAVT 239 (273)
T ss_pred eCCCHHHHHHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHH----CCCeEEEEe
Confidence 99999999999995 999999999988664 489999999999999999999999999999999997 999999999
Q ss_pred CCCCChHHHHhhhhHhHHHhhhcc
Q 024758 238 LFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 238 wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
||++..+++.+ .+|.-+++++.+
T Consensus 240 ~g~~~~~~l~~-~~ad~~i~~~~e 262 (273)
T PRK13225 240 WGFNDRQSLVA-ACPDWLLETPSD 262 (273)
T ss_pred cCCCCHHHHHH-CCCCEEECCHHH
Confidence 99999888773 456555555543
No 10
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.98 E-value=1.1e-31 Score=230.73 Aligned_cols=191 Identities=19% Similarity=0.177 Sum_probs=146.2
Q ss_pred EEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccccc
Q 024758 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSV 84 (263)
Q Consensus 5 vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~~~ 84 (263)
|+|||||||+||.+.+..+.+.+++++. |.+.. ..+.++.++|.+.+..+ +.+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~g~~~~~~~--~~~------------- 53 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVV-----GDGPA-------PFEEYRRHLGRYFPDIM--RIM------------- 53 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhc-----CCCCC-------CHHHHHHHhCccHHHHH--HHc-------------
Confidence 6899999999999999999999998852 22211 13456777777655433 111
Q ss_pred ccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCC
Q 024758 85 AEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSN 161 (263)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK 161 (263)
+ .+.+.. + .+...+.. .....++|||+.++|+ ++|++++|+||+
T Consensus 54 --~----------------------~~~~~~-~---~~~~~~~~-----~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~ 100 (205)
T TIGR01454 54 --G----------------------LPLEME-E---PFVRESYR-----LAGEVEVFPGVPELLAELRADGVGTAIATGK 100 (205)
T ss_pred --C----------------------CCHHHH-H---HHHHHHHH-----hhcccccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 1 110000 0 01111111 1235689999999999 789999999999
Q ss_pred chHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 162 QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
+...++..+++ +|+..+|+.++|.+ .||+|+++..+++++|++|++++||||+.+|+++|++ +|+++|+|+
T Consensus 101 ~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~----~Gi~~i~~~ 175 (205)
T TIGR01454 101 SGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARA----AGTATVAAL 175 (205)
T ss_pred chHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHH----cCCeEEEEE
Confidence 99999999995 99999999999875 2599999999999999999999999999999999998 999999999
Q ss_pred CCCCChHHHHhhhhHhHHHhhhcc
Q 024758 238 LFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 238 wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
||+++.+++.+ ..|.-++.++.+
T Consensus 176 ~g~~~~~~l~~-~~~~~~~~~~~~ 198 (205)
T TIGR01454 176 WGEGDAGELLA-ARPDFLLRKPQS 198 (205)
T ss_pred ecCCChhhhhh-cCCCeeeCCHHH
Confidence 99999988763 456556666544
No 11
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.97 E-value=3.4e-31 Score=238.35 Aligned_cols=205 Identities=19% Similarity=0.182 Sum_probs=156.2
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|+++|+|||||||+||.+.+..+.+.+++++ |++.. ..++++.++|.|...++. ..+..
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~-------~~~~~~~~~g~~~~~~~~-~~l~~------- 70 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLEL------GRPPA-------GLEAVRHWVGNGAPVLVR-RALAG------- 70 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHc------CCCCC-------CHHHHHHHhChhHHHHHH-HHhcc-------
Confidence 6799999999999999999999999999999 44321 124567788888655431 22110
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
....++++++..++....+++.|.. . .....+|||+.++|+ ++|++++|
T Consensus 71 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~g~~e~L~~Lk~~g~~l~i 122 (272)
T PRK13223 71 -----------------------SIDHDGVDDELAEQALALFMEAYAD----S-HELTVVYPGVRDTLKWLKKQGVEMAL 122 (272)
T ss_pred -----------------------cccccCCCHHHHHHHHHHHHHHHHh----c-CcCCccCCCHHHHHHHHHHCCCeEEE
Confidence 0001123333344444445554432 1 234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||++...++.++++ +|+..+|+.|++++ .+|+|++++.+++++|+++++|+||||+.+|+++|++ +|+++
T Consensus 123 vTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~----aGi~~ 197 (272)
T PRK13223 123 ITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKA----AGVQC 197 (272)
T ss_pred EECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHH----CCCeE
Confidence 999999999999995 99999999999876 2499999999999999999999999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMD 260 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~ 260 (263)
++|.|||+..+.+.+ ..++.++.++.
T Consensus 198 i~v~~G~~~~~~l~~-~~~~~vi~~l~ 223 (272)
T PRK13223 198 VALSYGYNHGRPIAE-ESPALVIDDLR 223 (272)
T ss_pred EEEecCCCCchhhhh-cCCCEEECCHH
Confidence 999999988887764 34554544443
No 12
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.97 E-value=4.2e-31 Score=236.50 Aligned_cols=198 Identities=13% Similarity=0.079 Sum_probs=146.2
Q ss_pred cEEEEecCcccccCHHHHH-HHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 3 DLYALDFDGVICDSCEETA-LSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~-~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
|+|||||||||+||.+.++ .+++.+++++ |++... .+.++.++|.+....+. ..+..
T Consensus 25 k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~------G~~~~~-------~e~~~~~~G~~~~~~~~-~l~~~-------- 82 (260)
T PLN03243 25 LGVVLEWEGVIVEDDSELERKAWRALAEEE------GKRPPP-------AFLLKRAEGMKNEQAIS-EVLCW-------- 82 (260)
T ss_pred eEEEEeCCCceeCCchHHHHHHHHHHHHHc------CCCCCH-------HHHHHHhcCCCHHHHHH-HHhcc--------
Confidence 7899999999999987776 4778899998 444211 23566788887665431 22210
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
. .+.+...+....++..|... . ....++|||+.++|+ ++|++++|+
T Consensus 83 -----~----------------------~~~~~~~~l~~~~~~~~~~~-~---~~~~~l~pg~~e~L~~L~~~g~~l~I~ 131 (260)
T PLN03243 83 -----S----------------------RDFLQMKRLAIRKEDLYEYM-Q---GGLYRLRPGSREFVQALKKHEIPIAVA 131 (260)
T ss_pred -----C----------------------CCHHHHHHHHHHHHHHHHHH-H---ccCcccCCCHHHHHHHHHHCCCEEEEE
Confidence 0 01111122222233333211 1 124679999999999 789999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||++...++.+|++ +||..||+.|++++ .||+|+++..+++++|++|++|+|||||..|+++|++ ||+++|
T Consensus 132 Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~----aG~~~i 206 (260)
T PLN03243 132 STRPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHD----GCMKCV 206 (260)
T ss_pred eCcCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH----cCCEEE
Confidence 99999999999995 99999999999875 2599999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+|. |+.+.+++.. +..++.+.++|
T Consensus 207 ~v~-g~~~~~~l~~---ad~vi~~~~el 230 (260)
T PLN03243 207 AVA-GKHPVYELSA---GDLVVRRLDDL 230 (260)
T ss_pred EEe-cCCchhhhcc---CCEEeCCHHHH
Confidence 996 8887776542 44555555443
No 13
>PRK11587 putative phosphatase; Provisional
Probab=99.97 E-value=2.5e-30 Score=224.68 Aligned_cols=194 Identities=16% Similarity=0.105 Sum_probs=141.0
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.++|+|||||||+||.+.+..+++.+++++ |++.. +..+.++|.+....+ +.+..
T Consensus 3 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~---------~~~~~~~g~~~~~~~--~~~~~-------- 57 (218)
T PRK11587 3 CKGFLFDLDGTLVDSLPAVERAWSNWADRH------GIAPD---------EVLNFIHGKQAITSL--RHFMA-------- 57 (218)
T ss_pred CCEEEEcCCCCcCcCHHHHHHHHHHHHHHc------CCCHH---------HHHHHHcCCCHHHHH--HHHhc--------
Confidence 489999999999999999999999999999 55420 122334566654432 21111
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
+ .+++.+.+.+..+ ..|. .......++|||+.++|+ ++|++++|+
T Consensus 58 -----~----------------------~~~~~~~~~~~~~-~~~~----~~~~~~~~~~pg~~e~L~~L~~~g~~~~iv 105 (218)
T PRK11587 58 -----G----------------------ASEAEIQAEFTRL-EQIE----ATDTEGITALPGAIALLNHLNKLGIPWAIV 105 (218)
T ss_pred -----c----------------------CCcHHHHHHHHHH-HHHH----HhhhcCceeCcCHHHHHHHHHHcCCcEEEE
Confidence 0 0111111222211 1111 122345689999999998 799999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||++...+...++. .|+. +|+.+++.+ .||+|+++..+++++|++|++|+|||||..|+++|++ ||+++|
T Consensus 106 Tn~~~~~~~~~l~~-~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~----aG~~~i 179 (218)
T PRK11587 106 TSGSVPVASARHKA-AGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLA----AGCHVI 179 (218)
T ss_pred cCCCchHHHHHHHh-cCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHH----CCCEEE
Confidence 99999999999995 9985 567777754 3599999999999999999999999999999999997 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+|+||+.. .++ ..+..++.++++|
T Consensus 180 ~v~~~~~~-~~~---~~~~~~~~~~~el 203 (218)
T PRK11587 180 AVNAPADT-PRL---DEVDLVLHSLEQL 203 (218)
T ss_pred EECCCCch-hhh---ccCCEEecchhhe
Confidence 99999743 222 3466677777665
No 14
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.97 E-value=4.6e-30 Score=239.70 Aligned_cols=185 Identities=12% Similarity=0.073 Sum_probs=140.0
Q ss_pred cEEEEecCcccccCHHHHHHHH-HHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSA-VKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~-~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
++|||||||||+||.+.+...+ +..++++ |++... .+.++.++|.+....+. +.+..
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~------G~~~~~-------~e~~~~~~G~~~~~~l~-~ll~~-------- 189 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLTLAQEE------GKSPPP-------AFILRRVEGMKNEQAIS-EVLCW-------- 189 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHHHHHHc------CCCCCH-------HHHHHHhcCCCHHHHHH-HHhhc--------
Confidence 7899999999999999888744 4556677 444221 23567788877655431 21110
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
..+++..++....+++.|.+. ......+|||+.++|+ ++|++++|+
T Consensus 190 ---------------------------~~~~~~~e~l~~~~~~~y~~~----~~~~~~l~pGa~ElL~~Lk~~GiklaIa 238 (381)
T PLN02575 190 ---------------------------SRDPAELRRMATRKEEIYQAL----QGGIYRLRTGSQEFVNVLMNYKIPMALV 238 (381)
T ss_pred ---------------------------cCCHHHHHHHHHHHHHHHHHH----hccCCCcCcCHHHHHHHHHHCCCeEEEE
Confidence 011222233333444444332 2334689999999999 899999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCCC----CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||++...++.+|++ +||..||+.|+|++. ||+|++++.+++++|++|++|+|||||..||++|++ ||+++|
T Consensus 239 Sn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~----AGm~~I 313 (381)
T PLN02575 239 STRPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHD----ARMKCV 313 (381)
T ss_pred eCCCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----cCCEEE
Confidence 99999999999995 999999999999763 599999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChHHH
Q 024758 235 LGNLFRFLCHIL 246 (263)
Q Consensus 235 ~v~wGy~~~~~l 246 (263)
+|+||+ ...++
T Consensus 314 gV~~~~-~~~~l 324 (381)
T PLN02575 314 AVASKH-PIYEL 324 (381)
T ss_pred EECCCC-ChhHh
Confidence 999985 34443
No 15
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.96 E-value=6.3e-29 Score=216.15 Aligned_cols=203 Identities=16% Similarity=0.098 Sum_probs=148.3
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.++|+|||||||+||.+.+..+.+.+++++ |.+.. ..++++..+|...+..+ +.+.+..
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~------g~~~~-------~~~~~~~~~g~~~~~~~--~~~~~~~----- 65 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDIS-------RREELPDTLGLRIDQVV--DLWYARQ----- 65 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHC------CCCCC-------HHHHHHHhhCCCHHHHH--HHHHHhc-----
Confidence 4589999999999999999999999999988 33311 11345556665544332 1111100
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
+.......+....+++.+.+. ......+|||+.++|+ ++|++++|
T Consensus 66 ----------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i 113 (222)
T PRK10826 66 ----------------------------PWNGPSRQEVVQRIIARVISL----IEETRPLLPGVREALALCKAQGLKIGL 113 (222)
T ss_pred ----------------------------CCCCCCHHHHHHHHHHHHHHH----HhcCCCCCCCHHHHHHHHHHCCCeEEE
Confidence 000000112222333333222 2334689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||+....++.++++ +|+..+|+.+++++ .+|+|+++..+++++|++|++|+||||+.+|+++|++ ||+++
T Consensus 114 ~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~----aG~~~ 188 (222)
T PRK10826 114 ASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKA----ARMRS 188 (222)
T ss_pred EeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHH----cCCEE
Confidence 999999999999996 99999999999875 2499999999999999999999999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|+|.++....+... -.+..+..++..|
T Consensus 189 i~v~~~~~~~~~~~--~~~~~~~~~~~dl 215 (222)
T PRK10826 189 IVVPAPEQQNDPRW--ALADVKLESLTEL 215 (222)
T ss_pred EEecCCccCchhhh--hhhheeccCHHHH
Confidence 99999976654432 2356666666554
No 16
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=7.4e-29 Score=214.81 Aligned_cols=204 Identities=22% Similarity=0.221 Sum_probs=152.5
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.++|+|||||||+||.+....+.+.+++++ |.+... .+.++.++|.+...++. +.+.. .
T Consensus 6 ~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~------~~~~~~-------~~~~~~~~g~~~~~~~~-~~~~~-~------ 64 (226)
T PRK13222 6 IRAVAFDLDGTLVDSAPDLAAAVNAALAAL------GLPPAG-------EERVRTWVGNGADVLVE-RALTW-A------ 64 (226)
T ss_pred CcEEEEcCCcccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhCccHHHHHH-HHHhh-c------
Confidence 489999999999999999999999999888 333221 24566777877655431 22211 0
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
+ ...+.+..++....+.+.|.+ ......+++||+.++|+ ++|++++|+
T Consensus 65 -----~--------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~l~~~g~~~~i~ 115 (226)
T PRK13222 65 -----G--------------------REPDEELLEKLRELFDRHYAE----NVAGGSRLYPGVKETLAALKAAGYPLAVV 115 (226)
T ss_pred -----c--------------------CCccHHHHHHHHHHHHHHHHH----hccccCccCCCHHHHHHHHHHCCCeEEEE
Confidence 0 011223333334444444433 33335789999999999 689999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||+.....+.++++ +|+..+|+.+++.+ .+|+|++++.++++++.++++++||||+.+|+++|++ +|+++|
T Consensus 116 S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~----~g~~~i 190 (226)
T PRK13222 116 TNKPTPFVAPLLEA-LGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARA----AGCPSV 190 (226)
T ss_pred eCCCHHHHHHHHHH-cCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHH----CCCcEE
Confidence 99999999999995 99999999999875 3499999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+|.||+.+.+++. ...+..++.+.++
T Consensus 191 ~v~~g~~~~~~~~-~~~~~~~i~~~~~ 216 (226)
T PRK13222 191 GVTYGYNYGEPIA-LSEPDVVIDHFAE 216 (226)
T ss_pred EECcCCCCccchh-hcCCCEEECCHHH
Confidence 9999998766654 2334445555443
No 17
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.96 E-value=5.2e-29 Score=225.77 Aligned_cols=217 Identities=17% Similarity=0.146 Sum_probs=143.2
Q ss_pred cEEEEecCcccccCH-HHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 3 DLYALDFDGVICDSC-EETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~-~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
++|||||||||+||. +.+..+++.+++++ |+++.... .+....++. +|.|...+. +.+....++
T Consensus 41 k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~------G~~~~~~~--~~~~~~~~~-~g~~~~~~~--~~~~~~~~~---- 105 (286)
T PLN02779 41 EALLFDCDGVLVETERDGHRVAFNDAFKEF------GLRPVEWD--VELYDELLN-IGGGKERMT--WYFNENGWP---- 105 (286)
T ss_pred cEEEEeCceeEEccccHHHHHHHHHHHHHc------CCCCCCCC--HHHHHHHHc-cCCChHHHH--HHHHHcCCC----
Confidence 789999999999999 88889999999999 44211000 011122334 776654432 222110000
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccC-CCCcccHHHHHH---hCCCcEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGA-NRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~-~~lypGv~e~L~---~~g~~laI 157 (263)
..+. .....+++..++....+.+.+...|.+.+... .++|||+.++|+ ++|++++|
T Consensus 106 --------~~~~------------~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~I 165 (286)
T PLN02779 106 --------TSTI------------EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAV 165 (286)
T ss_pred --------cccc------------ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEE
Confidence 0000 00000111122222222222222233222222 489999999998 78999999
Q ss_pred EcCCchHHHHHHHHHhhCC---CCCCceEEcCC---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 158 VTSNQSRFVETLLRELAGV---TITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl---~~~f~~v~G~~---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
+||++...+..+|++ +++ ..+|+.+.+.+ .||+|+++.++++++|++|++|+||||+.+|+++|++ +|+
T Consensus 166 vTn~~~~~~~~~l~~-~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~----aG~ 240 (286)
T PLN02779 166 CSTSNEKAVSKIVNT-LLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKA----AGM 240 (286)
T ss_pred EeCCCHHHHHHHHHH-hccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHH----cCC
Confidence 999999999999995 643 33455553433 3599999999999999999999999999999999998 999
Q ss_pred cEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 232 NLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 232 ~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++|+|.||+++.+++. .+..+++++.++
T Consensus 241 ~~i~v~~g~~~~~~l~---~ad~vi~~~~~l 268 (286)
T PLN02779 241 RCIVTKSSYTADEDFS---GADAVFDCLGDV 268 (286)
T ss_pred EEEEEccCCccccccC---CCcEEECChhhc
Confidence 9999999999887762 566667766554
No 18
>PLN02940 riboflavin kinase
Probab=99.96 E-value=1.6e-28 Score=230.80 Aligned_cols=198 Identities=12% Similarity=0.100 Sum_probs=145.8
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
++|+|||||||+||.+.+..+++.+++++ |.+.. .++++..+|.+....+ .+.+..
T Consensus 12 k~VIFDlDGTLvDt~~~~~~a~~~~~~~~------G~~~~--------~~~~~~~~G~~~~~~~-~~~~~~--------- 67 (382)
T PLN02940 12 SHVILDLDGTLLNTDGIVSDVLKAFLVKY------GKQWD--------GREAQKIVGKTPLEAA-ATVVED--------- 67 (382)
T ss_pred CEEEECCcCcCCcCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHhcCCCHHHHH-HHHHHH---------
Confidence 78999999999999999999999999998 43311 1345667776554332 122111
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEc
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (263)
++.+. ..++....+++.+.+. + ....+|||+.++|+ ++|++++|+|
T Consensus 68 -------------------------~~~~~-~~~~~~~~~~~~~~~~----~-~~~~l~pGv~elL~~Lk~~g~~l~IvT 116 (382)
T PLN02940 68 -------------------------YGLPC-STDEFNSEITPLLSEQ----W-CNIKALPGANRLIKHLKSHGVPMALAS 116 (382)
T ss_pred -------------------------hCCCC-CHHHHHHHHHHHHHHH----H-ccCCCCcCHHHHHHHHHHCCCcEEEEe
Confidence 11110 0111222333333322 2 24689999999999 8999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 160 SNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 160 nK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
|+++..++..|++++|+..+|+.|++++ .||+|+++..+++++|++|++|+|||||..|+++|++ ||+++|+
T Consensus 117 n~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~----aGi~~I~ 192 (382)
T PLN02940 117 NSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKA----AGMEVIA 192 (382)
T ss_pred CCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHH----cCCEEEE
Confidence 9999999998873389999999999976 3599999999999999999999999999999999998 9999999
Q ss_pred EcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 236 GNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 236 v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|+||+..... ...+.-++.++.+|
T Consensus 193 v~~g~~~~~~---~~~ad~~i~sl~el 216 (382)
T PLN02940 193 VPSIPKQTHL---YSSADEVINSLLDL 216 (382)
T ss_pred ECCCCcchhh---ccCccEEeCCHhHc
Confidence 9999765432 23454455555543
No 19
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.96 E-value=1.5e-28 Score=212.73 Aligned_cols=121 Identities=21% Similarity=0.135 Sum_probs=104.8
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
..++|||+.++|+ ++|++++|+||++...++..|++ +|+..||+.|++++ .||+|+++..+++++|++|+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 3589999999999 78999999999999999999996 99999999999864 3599999999999999999999
Q ss_pred EEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 210 HFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 210 l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+|||||. +|+++|++ +|+++|+|.||+....++.....+..++.++.+|
T Consensus 171 ~~igDs~~~di~~A~~----aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKN----LGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred EEECCChHHHHHHHHH----CCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999998 89999998 9999999999987665544344455666666654
No 20
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.96 E-value=6.1e-28 Score=202.96 Aligned_cols=178 Identities=17% Similarity=0.151 Sum_probs=130.8
Q ss_pred EEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccccc
Q 024758 4 LYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSS 83 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~~ 83 (263)
+|+|||||||+||.+.+..+.+.+++++ |++. . .+..+.+.|.+....+ .+.+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~-~-------~~~~~~~~g~~~~~~~-~~~~~~~--------- 56 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADEL------GIPF-D-------EEFNESLKGVSREDSL-ERILDLG--------- 56 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHc------CCCC-C-------HHHHHHhcCCChHHHH-HHHHHhc---------
Confidence 5899999999999999999999999888 4441 1 1234455555443332 1221110
Q ss_pred cccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcC
Q 024758 84 VAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTS 160 (263)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~Tn 160 (263)
+. .++++..++....+.+.|.+.+.. ....++||||.++|+ ++|++++|+||
T Consensus 57 ---~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~~L~~L~~~g~~~~i~s~ 111 (185)
T TIGR01990 57 ---GK--------------------KYSEEEKEELAERKNDYYVELLKE--LTPADVLPGIKNLLDDLKKNNIKIALASA 111 (185)
T ss_pred ---CC--------------------CCCHHHHHHHHHHHHHHHHHHHHh--cCCcccCccHHHHHHHHHHCCCeEEEEeC
Confidence 00 113333344444444555443322 223589999999999 78999999999
Q ss_pred CchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 161 K~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
+.. ...+|++ +|+..+|+.+++++ .+|+|+++..++++++++|++++||||+.+|+++|++ +|+++|+|
T Consensus 112 ~~~--~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~----aG~~~i~v 184 (185)
T TIGR01990 112 SKN--APTVLEK-LGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKA----AGMFAVGV 184 (185)
T ss_pred Ccc--HHHHHHh-cCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHH----cCCEEEec
Confidence 754 4678995 99999999999865 3599999999999999999999999999999999998 99999998
Q ss_pred c
Q 024758 237 N 237 (263)
Q Consensus 237 ~ 237 (263)
+
T Consensus 185 ~ 185 (185)
T TIGR01990 185 G 185 (185)
T ss_pred C
Confidence 5
No 21
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.96 E-value=7.1e-28 Score=209.01 Aligned_cols=197 Identities=13% Similarity=0.084 Sum_probs=138.9
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.++|+|||||||+||.+.+..+.+.+++++ |++.. . .+..+.+.|......+ +.+
T Consensus 4 ~~~viFD~DGTL~d~~~~~~~a~~~~~~~~------g~~~~-~------~~~~~~~~g~~~~~~~--~~~---------- 58 (221)
T PRK10563 4 IEAVFFDCDGTLVDSEVICSRAYVTMFAEF------GITLS-L------EEVFKRFKGVKLYEII--DII---------- 58 (221)
T ss_pred CCEEEECCCCCCCCChHHHHHHHHHHHHHc------CCCCC-H------HHHHHHhcCCCHHHHH--HHH----------
Confidence 489999999999999999999999999888 44311 1 1123344444332221 111
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcC--CHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHHhCCCcEEEEc
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVT 159 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~~~g~~laI~T 159 (263)
.+.++. +.++ ....|++.+... +....++|||+.++|+.-+++++|+|
T Consensus 59 -----------------------~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~gv~~~L~~L~~~~~ivT 108 (221)
T PRK10563 59 -----------------------SKEHGVTLAKAE---LEPVYRAEVARL----FDSELEPIAGANALLESITVPMCVVS 108 (221)
T ss_pred -----------------------HHHhCCCCCHHH---HHHHHHHHHHHH----HHccCCcCCCHHHHHHHcCCCEEEEe
Confidence 111121 1111 112233333222 22356899999999996579999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCc-eEEcC-C---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 160 SNQSRFVETLLRELAGVTITPD-RLYGL-G---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 160 nK~~~~a~~iL~~~~gl~~~f~-~v~G~-~---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
|++...++..|++ +|+..+|+ .|+++ + .||+|+++..+++++|++|++|+||||+..||++|++ ||+++|
T Consensus 109 n~~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~----aG~~~i 183 (221)
T PRK10563 109 NGPVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIA----AGMEVF 183 (221)
T ss_pred CCcHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----CCCEEE
Confidence 9999999999995 99999995 66665 3 3599999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
++.++.+... +. ..+..++.++.+
T Consensus 184 ~~~~~~~~~~-~~--~~~~~~~~~~~~ 207 (221)
T PRK10563 184 YFCADPHNKP-ID--HPLVTTFTDLAQ 207 (221)
T ss_pred EECCCCCCcc-hh--hhhhHHHHHHHH
Confidence 9987765432 21 234445555544
No 22
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.95 E-value=5e-28 Score=204.46 Aligned_cols=175 Identities=13% Similarity=0.088 Sum_probs=127.8
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
++|+|||||||+||.+.+..+.+.+++++ |++. + .+.++.+.|......+ +.+....
T Consensus 6 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~------g~~~-~-------~~~~~~~~g~~~~~~~--~~~~~~~------- 62 (188)
T PRK10725 6 AGLIFDMDGTILDTEPTHRKAWREVLGRY------GLQF-D-------EQAMVALNGSPTWRIA--QAIIELN------- 62 (188)
T ss_pred eEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCC-C-------HHHHHHhcCCCHHHHH--HHHHHHh-------
Confidence 78999999999999999999999999998 4331 1 1244555665543322 1111100
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEEEcC
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTS 160 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI~Tn 160 (263)
+. ..+.+.+... +...|.+. ......+|||+ ++|+ .++++++|+||
T Consensus 63 ----~~--------------------~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~-e~L~~L~~~~~l~I~T~ 110 (188)
T PRK10725 63 ----QA--------------------DLDPHALARE---KTEAVKSM----LLDSVEPLPLI-EVVKAWHGRRPMAVGTG 110 (188)
T ss_pred ----CC--------------------CCCHHHHHHH---HHHHHHHH----HhccCCCccHH-HHHHHHHhCCCEEEEcC
Confidence 00 0111111111 11222221 12345789975 7777 56699999999
Q ss_pred CchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 161 K~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
+++..++..|++ +|+..||+.|++++ .||+|+++..+++++|++|++|+||||+.+|+++|++ ||+++|+|
T Consensus 111 ~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~----aG~~~i~~ 185 (188)
T PRK10725 111 SESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARA----AGMDAVDV 185 (188)
T ss_pred CchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHH----CCCEEEee
Confidence 999999999996 99999999999975 2599999999999999999999999999999999998 99999998
Q ss_pred c
Q 024758 237 N 237 (263)
Q Consensus 237 ~ 237 (263)
.
T Consensus 186 ~ 186 (188)
T PRK10725 186 R 186 (188)
T ss_pred c
Confidence 5
No 23
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.95 E-value=2.1e-27 Score=199.71 Aligned_cols=176 Identities=16% Similarity=0.135 Sum_probs=130.7
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.++|+|||||||+||.+....+.+.+++++ |++ .. .+....+.|.+....+ ...+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~-~~-------~~~~~~~~g~~~~~~~-~~~~---------- 55 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKY------GIE-FD-------KQYNTSLGGLSREDIL-RAIL---------- 55 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHc------CCC-CC-------HHHHHHcCCCCHHHHH-HHHH----------
Confidence 378999999999999999999999999988 433 11 1233444554433322 1111
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhh--cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~la 156 (263)
+.+ +++++.+++....+.+.|.+... .....+|||+.++|+ ++|++++
T Consensus 56 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~~i~ 108 (185)
T TIGR02009 56 ------------------------KLRKPGLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGIAVG 108 (185)
T ss_pred ------------------------HhcCCCCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCCeEE
Confidence 111 23334444444444444332211 234689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
|+||+ ..++.+|++ +|+..+|+.++|++ .+|+|+++..++++++++|++++|||||..|+++|++ +|++
T Consensus 109 i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~----~G~~ 181 (185)
T TIGR02009 109 LGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARA----AGMF 181 (185)
T ss_pred EEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----CCCe
Confidence 99999 668999995 99999999999865 3499999999999999999999999999999999998 9999
Q ss_pred EEEE
Q 024758 233 LYLG 236 (263)
Q Consensus 233 ~v~v 236 (263)
+|+|
T Consensus 182 ~i~v 185 (185)
T TIGR02009 182 AVAV 185 (185)
T ss_pred EeeC
Confidence 9986
No 24
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.95 E-value=1.3e-27 Score=229.56 Aligned_cols=203 Identities=15% Similarity=0.137 Sum_probs=144.1
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.++|+|||||||+||.+.+..+++.++++++.....+.. ...+.++.++|......+ +.+..
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~--------~~~~~~~~~~G~~~~~~~--~~l~~------- 302 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTV--------TPIDKYREIMGVPLPKVW--EALLP------- 302 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCC--------CCHHHHHHHcCCChHHHH--HHHhh-------
Confidence 6689999999999999999999999999998311000000 012356667776654432 11111
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
..+ .+..++....+++.|.... .....+||||+.++|+ ++|++++|
T Consensus 303 --------------------------~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~l~pG~~e~L~~Lk~~g~~l~I 351 (459)
T PRK06698 303 --------------------------DHS--LEIREQTDAYFLERLIENI---KSGKGALYPNVKEIFTYIKENNCSIYI 351 (459)
T ss_pred --------------------------hcc--hhHHHHHHHHHHHHhHHHH---hhcCCCcCCCHHHHHHHHHHCCCeEEE
Confidence 000 0001111122223322211 1234689999999998 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCCC---CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~---~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
+||++...++.+|++ +|+..||+.+++.+. +|||+++..++++++ +++|+|||||.+|+++|++ ||+++|
T Consensus 352 vS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~----AG~~~I 424 (459)
T PRK06698 352 ASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKD----NGLIAI 424 (459)
T ss_pred EeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHH----CCCeEE
Confidence 999999999999995 999999999998763 489999999998864 6899999999999999998 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+|.||+...+++. .+..++.++++
T Consensus 425 ~v~~~~~~~~~~~---~~d~~i~~l~e 448 (459)
T PRK06698 425 GCNFDFAQEDELA---QADIVIDDLLE 448 (459)
T ss_pred EEeCCCCcccccC---CCCEEeCCHHH
Confidence 9999998766553 34445555443
No 25
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.94 E-value=5.5e-27 Score=200.21 Aligned_cols=169 Identities=14% Similarity=0.063 Sum_probs=121.1
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+|+. .+++.+++++ |++ .++++..+|.+....+. ..
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~------g~~----------~~~~~~~~g~~~~~~~~-~~---------- 49 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKY------NIP----------TDHILKMIQDERFRDPG-EL---------- 49 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhc------CCC----------HHHHHHHHhHhhhcCHH-HH----------
Confidence 88999999999999954 3566777777 443 13455666644221110 00
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIV 158 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI~ 158 (263)
++.+++.+.+.+..+++ ..+....++|||+.++|+ +++++++++
T Consensus 50 ---------------------------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~pG~~e~L~~L~~~~~~~i~ 95 (197)
T PHA02597 50 ---------------------------FGCDQELAKKLIEKYNN-------SDFIRYLSAYDDALDVINKLKEDYDFVAV 95 (197)
T ss_pred ---------------------------hcccHHHHHHHhhhhhH-------HHHHHhccCCCCHHHHHHHHHhcCCEEEE
Confidence 01122223333333332 123345689999999999 445688999
Q ss_pred cCCchHHHHHHHHHhhCCCC----CCceEEcCC-CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCC--CC
Q 024758 159 TSNQSRFVETLLRELAGVTI----TPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD--GW 231 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~----~f~~v~G~~-~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A--gi 231 (263)
||++......++++ +|+.. +|+.++|.+ .+|||+++..+++++| +++++|||||..|+++|++ | ||
T Consensus 96 Tn~~~~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~----a~~Gi 168 (197)
T PHA02597 96 TALGDSIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHE----ALSQL 168 (197)
T ss_pred eCCccchhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHH----HHcCC
Confidence 99988877767774 88764 567787755 4599999999999999 8889999999999999997 8 99
Q ss_pred cEEEEcCCCC
Q 024758 232 NLYLGNLFRF 241 (263)
Q Consensus 232 ~~v~v~wGy~ 241 (263)
++|+|+||+.
T Consensus 169 ~~i~~~~~~~ 178 (197)
T PHA02597 169 PVIHMLRGER 178 (197)
T ss_pred cEEEecchhh
Confidence 9999999976
No 26
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.94 E-value=1.9e-26 Score=199.23 Aligned_cols=117 Identities=17% Similarity=0.187 Sum_probs=99.9
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhC-CCCCCc
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKP-EHQGLR 208 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l-~~~~~~ 208 (263)
..++|||+.++|+ ++ ++++|+||+....++.+|++ +|+..+|+.|++++ .||+|+++..+++++ |++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 4689999999999 55 99999999999999999996 99999999999865 259999999999999 999999
Q ss_pred EEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 209 ~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++||||+. +|+++|++ +|+++|+++||+.... ....+.-++.++++|
T Consensus 173 ~v~igD~~~~di~~A~~----~G~~~i~~~~~~~~~~---~~~~~~~~~~~~~el 220 (224)
T TIGR02254 173 VLMIGDSLTADIKGGQN----AGLDTCWMNPDMHPNP---DDIIPTYEIRSLEEL 220 (224)
T ss_pred eEEECCCcHHHHHHHHH----CCCcEEEECCCCCCCC---CCCCCceEECCHHHH
Confidence 99999998 79999998 9999999999976532 123444556665543
No 27
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.94 E-value=5.2e-26 Score=198.95 Aligned_cols=183 Identities=17% Similarity=0.154 Sum_probs=133.7
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.+++|||||||||||.+-...+...+++++ |++.. .+..+...|.+....+ ..+.....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~~---- 60 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEY------GIEIS--------DEEIRELHGGGIARII--DLLRKLAA---- 60 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHc------CCCCC--------HHHHHHHHCCChHHHH--HHHHHHhc----
Confidence 6799999999999999998888889999999 44321 1345555554422221 22211000
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.... .+... ....+++.. .......+++|||.++|+ ++|+++++
T Consensus 61 ------~~~~-------------------~~~~~---~~~~~~~~~-----~~~~~~~~~~pGv~~~l~~L~~~~i~~av 107 (221)
T COG0637 61 ------GEDP-------------------ADLAE---LERLLYEAE-----ALELEGLKPIPGVVELLEQLKARGIPLAV 107 (221)
T ss_pred ------CCcc-------------------cCHHH---HHHHHHHHH-----HhhhcCCCCCccHHHHHHHHHhcCCcEEE
Confidence 0000 00000 001111111 112345689999999999 78899999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||.++..++.+|+. +|+..||+.++.++ .||+|++++.+.+++|++|++|+.|+||.+.|++|++ |||.+
T Consensus 108 aS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~a----AGm~v 182 (221)
T COG0637 108 ASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKA----AGMRV 182 (221)
T ss_pred ecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHH----CCCEE
Confidence 999999999999996 99999999988754 3599999999999999999999999999999999997 99999
Q ss_pred EEEcCCCC
Q 024758 234 YLGNLFRF 241 (263)
Q Consensus 234 v~v~wGy~ 241 (263)
|+++-+..
T Consensus 183 v~v~~~~~ 190 (221)
T COG0637 183 VGVPAGHD 190 (221)
T ss_pred EEecCCCC
Confidence 99998544
No 28
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.94 E-value=1.5e-26 Score=204.04 Aligned_cols=195 Identities=12% Similarity=0.062 Sum_probs=129.1
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
|+|+|||||||+||.+.+..+.+.+++.++...+ .+.... ....+.++..++......
T Consensus 11 k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~----------------- 68 (238)
T PRK10748 11 SALTFDLDDTLYDNRPVILRTEQEALAFVQNYHP-ALRSFQ----NEDLQRLRQALREAEPEI----------------- 68 (238)
T ss_pred eeEEEcCcccccCChHHHHHHHHHHHHHHHHhCc-chhhCC----HHHHHHHHHHHHHhCchh-----------------
Confidence 7999999999999999999999988876621000 111000 001112222111110000
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEEEcC
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTS 160 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI~Tn 160 (263)
...+..........+++.+|++.+..+.....+...|.. |.....+|||+.++|+ +++++++|+||
T Consensus 69 -------~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn 136 (238)
T PRK10748 69 -------YHDVTRWRWRAIEQAMLDAGLSAEEASAGADAAMINFAK-----WRSRIDVPQATHDTLKQLAKKWPLVAITN 136 (238)
T ss_pred -------hCcHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----HhhcCCCCccHHHHHHHHHcCCCEEEEEC
Confidence 000000001112334556676654433333333333322 2234689999999999 66799999999
Q ss_pred CchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCC-hhhHHHhhccCcCCCCcEEE
Q 024758 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 161 K~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~Agi~~v~ 235 (263)
++.. ++ ++|+..||+.|++++ .||+|+++..+++++|++|++|+||||+ ..|+.+|++ +|+++++
T Consensus 137 ~~~~-----~~-~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~----aG~~~i~ 206 (238)
T PRK10748 137 GNAQ-----PE-LFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIR----CGMQACW 206 (238)
T ss_pred CCch-----HH-HCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHH----CCCeEEE
Confidence 8876 47 499999999999875 3599999999999999999999999999 599999998 9999999
Q ss_pred EcCCCC
Q 024758 236 GNLFRF 241 (263)
Q Consensus 236 v~wGy~ 241 (263)
|.-+.+
T Consensus 207 v~~~~~ 212 (238)
T PRK10748 207 INPENG 212 (238)
T ss_pred EcCCCc
Confidence 987654
No 29
>PRK09449 dUMP phosphatase; Provisional
Probab=99.94 E-value=7.7e-26 Score=196.46 Aligned_cols=98 Identities=18% Similarity=0.201 Sum_probs=89.0
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCC-CCcE
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~-~~~~ 209 (263)
..++|||+.++|+ ++|++++|+||++...++..|++ +|+..+|+.|++++ .||+|+++..+++++|+. +++|
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence 4679999999999 77899999999999999999995 99999999999865 359999999999999975 5899
Q ss_pred EEEcCCh-hhHHHhhccCcCCCCcEEEEcCC
Q 024758 210 HFVEDRL-ATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 210 l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
+||||+. +|+++|++ +|+++|++.|+
T Consensus 172 ~~vgD~~~~Di~~A~~----aG~~~i~~~~~ 198 (224)
T PRK09449 172 LMVGDNLHSDILGGIN----AGIDTCWLNAH 198 (224)
T ss_pred EEEcCCcHHHHHHHHH----CCCcEEEECCC
Confidence 9999998 69999998 99999999854
No 30
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.93 E-value=1.4e-25 Score=191.83 Aligned_cols=178 Identities=15% Similarity=0.097 Sum_probs=121.7
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHH-------HHHHHHHhhcc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDT-------LLLVRLLLEMR 75 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~-------~i~~~~l~~~~ 75 (263)
.+|+|||||||+||.+.+..+++.++++++ +.+.. .++++.++|.|... ..+.+.+...
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 66 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFG------GVSVT-------HADIDHTKLAGNANNDWQLTHRLVVDGLNSA- 66 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHc------CCCCC-------HHHHHHHHHccCccCchHHHHHHHHHhhhcc-
Confidence 379999999999999999999999999993 22211 24567777765310 0011211100
Q ss_pred cccccccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhh--hh---ccccCCCCcccHHHHHH-
Q 024758 76 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTD--FT---TWIGANRLYPGVSDALK- 149 (263)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~--~~---~~~~~~~lypGv~e~L~- 149 (263)
. . ..+ .++...++....+++.|.... .. .......+.|++.++|+
T Consensus 67 -----------~-~----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 117 (197)
T TIGR01548 67 -----------S-S----------------ERV-RDAPTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRE 117 (197)
T ss_pred -----------c-c----------------hhc-cCCccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHH
Confidence 0 0 000 000111122233333333210 00 00012245566699998
Q ss_pred --hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC---CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 150 --LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 150 --~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~---~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
++|++++|+||+++..++.+|++ +|+..+|+.+++++. ||+|+++..+++++|+++++|+||||+.+|+++|++
T Consensus 118 l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 118 LHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred HHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHh
Confidence 78999999999999999999996 999999999998753 599999999999999999999999999999999986
No 31
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.93 E-value=1.3e-25 Score=233.71 Aligned_cols=201 Identities=16% Similarity=0.195 Sum_probs=146.9
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
++|+|||||||+||.+.+..+++.+++++ |++.. .++++.++|.+...++ +.+....
T Consensus 76 kaVIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~it--------~e~~~~~~G~~~~~~~--~~~~~~~------- 132 (1057)
T PLN02919 76 SAVLFDMDGVLCNSEEPSRRAAVDVFAEM------GVEVT--------VEDFVPFMGTGEANFL--GGVASVK------- 132 (1057)
T ss_pred CEEEECCCCCeEeChHHHHHHHHHHHHHc------CCCCC--------HHHHHHHhCCCHHHHH--HHHHHhc-------
Confidence 79999999999999999999999999998 44421 1345666776644322 1111100
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEc
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (263)
+.. +++.+ +..+.+.+.|.+.|... ....+|||+.++|+ ++|++++|+|
T Consensus 133 ----~l~-------------------~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~pG~~elL~~Lk~~G~~l~IvS 184 (1057)
T PLN02919 133 ----GVK-------------------GFDPD---AAKKRFFEIYLEKYAKP--NSGIGFPGALELITQCKNKGLKVAVAS 184 (1057)
T ss_pred ----CCC-------------------CCCHH---HHHHHHHHHHHHHhhhc--ccCccCccHHHHHHHHHhCCCeEEEEe
Confidence 000 01111 11222333333333221 12358999999999 8999999999
Q ss_pred CCchHHHHHHHHHhhCCC-CCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 160 SNQSRFVETLLRELAGVT-ITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 160 nK~~~~a~~iL~~~~gl~-~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
|+....++.+|++ +|+. .||+.+++.+ .||+|+++.+++++++++|++|+||||+..|+++|++ |||++|
T Consensus 185 n~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~----aGm~~I 259 (1057)
T PLN02919 185 SADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARA----AGMRCI 259 (1057)
T ss_pred CCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHH----cCCEEE
Confidence 9999999999996 9996 7899999876 2599999999999999999999999999999999997 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+|.||+ ..++|. ...|..+++++.+
T Consensus 260 ~v~~~~-~~~~L~-~~~a~~vi~~l~e 284 (1057)
T PLN02919 260 AVTTTL-SEEILK-DAGPSLIRKDIGN 284 (1057)
T ss_pred EECCCC-CHHHHh-hCCCCEEECChHH
Confidence 999997 556665 3455555555544
No 32
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.93 E-value=9.6e-26 Score=190.58 Aligned_cols=95 Identities=15% Similarity=0.166 Sum_probs=86.4
Q ss_pred CCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC---C-----CCcHHHHHHHHhhCCCCCCc
Q 024758 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---T-----GPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 137 ~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~---~-----~pkp~~l~~~l~~l~~~~~~ 208 (263)
..++|||+.++|+.-..+++|+||++...+..+|++ +|+..+|+.|++++ . ||+|+++..+++++|++|++
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 457999999999933368999999999999999996 99999999999864 2 79999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 209 LHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 209 ~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
++||||+..|+++|++ +|+++|+|
T Consensus 161 ~l~vgD~~~di~aA~~----~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKA----LGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHH----cCCEEeeC
Confidence 9999999999999998 99999876
No 33
>PLN02811 hydrolase
Probab=99.93 E-value=7.6e-25 Score=190.65 Aligned_cols=193 Identities=13% Similarity=0.101 Sum_probs=137.0
Q ss_pred cCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccccccccCc
Q 024758 9 FDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGL 88 (263)
Q Consensus 9 lDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~~~~~~~ 88 (263)
|||||+||.+.+..+++.+++++ |++ .. .+..+.++|.+....+ +.+.... +.
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~------g~~-~~-------~~~~~~~~G~~~~~~~--~~~~~~~-----------~~ 53 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARY------GKT-FD-------WSLKAKMMGKKAIEAA--RIFVEES-----------GL 53 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHc------CCC-CC-------HHHHHHccCCCHHHHH--HHHHHHh-----------CC
Confidence 79999999999999999999999 443 11 2346667887654432 2121100 00
Q ss_pred chHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCCchHH
Q 024758 89 TVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRF 165 (263)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~ 165 (263)
+.+ ...+.+.+ .++.+... ......+||||.++|+ ++|++++|+||+....
T Consensus 54 ~~~------------------~~~~~~~~----~~~~~~~~----~~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 54 SDS------------------LSPEDFLV----EREAMLQD----LFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CCC------------------CCHHHHHH----HHHHHHHH----HHhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 000 01111111 11222111 1234689999999999 7899999999998764
Q ss_pred HH-HHHHHhhCCCCCCceEEcCC------CCCcHHHHHHHHhhCC---CCCCcEEEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 166 VE-TLLRELAGVTITPDRLYGLG------TGPKVNVLKQLQKKPE---HQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 166 a~-~iL~~~~gl~~~f~~v~G~~------~~pkp~~l~~~l~~l~---~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
.. .+++ +.++..+|+.+++.+ .||+|+++..++++++ ++|++|+||||+..|+++|++ ||+++|+
T Consensus 108 ~~~~~~~-~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~----aG~~~i~ 182 (220)
T PLN02811 108 FDLKTQR-HGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN----AGMSVVM 182 (220)
T ss_pred HHHHHcc-cHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHH----CCCeEEE
Confidence 44 4555 368888999999866 2499999999999996 999999999999999999998 9999999
Q ss_pred EcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 236 GNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 236 v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|.||+.+...+ ..+..+++++.+|
T Consensus 183 v~~~~~~~~~~---~~~d~vi~~~~e~ 206 (220)
T PLN02811 183 VPDPRLDKSYC---KGADQVLSSLLDF 206 (220)
T ss_pred EeCCCCcHhhh---hchhhHhcCHhhC
Confidence 99998766533 2677788887665
No 34
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.93 E-value=8e-25 Score=187.33 Aligned_cols=92 Identities=17% Similarity=0.239 Sum_probs=83.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
.++|||+.++|+ ++|++++|+||++.. .+..|++ +|+..+|+.|++++ .||+|+++..+++++|++|++++
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 479999999999 689999999999876 4788995 99999999999865 25999999999999999999999
Q ss_pred EEcCCh-hhHHHhhccCcCCCCcEEE
Q 024758 211 FVEDRL-ATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 211 ~VGDs~-~Di~aA~~~~~~Agi~~v~ 235 (263)
||||+. +||++|++ +|+++|+
T Consensus 182 ~IgD~~~~Di~~A~~----aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQGARA----AGWRALL 203 (203)
T ss_pred EECCCchHHHHHHHH----cCCeeeC
Confidence 999997 89999997 9999873
No 35
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.92 E-value=5.2e-25 Score=192.78 Aligned_cols=105 Identities=12% Similarity=0.052 Sum_probs=95.2
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCc
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~ 208 (263)
...++|||+.++|+ ++|++++|+||++...++..|++ +|+..+|+.|++++ .||+|++++.+++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 34689999999999 78999999999999999999995 99999999999865 359999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCcCCCCc-EEEEcCCCCChHH
Q 024758 209 LHFVEDRLATLKNVIKEPELDGWN-LYLGNLFRFLCHI 245 (263)
Q Consensus 209 ~l~VGDs~~Di~aA~~~~~~Agi~-~v~v~wGy~~~~~ 245 (263)
|+|||||..|+++|++ ||++ +++|++|.+..++
T Consensus 169 ~l~igDs~~di~aA~~----aG~~~~~~v~~~~~~~~~ 202 (224)
T PRK14988 169 TLFIDDSEPILDAAAQ----FGIRYCLGVTNPDSGIAE 202 (224)
T ss_pred EEEEcCCHHHHHHHHH----cCCeEEEEEeCCCCCccc
Confidence 9999999999999997 9998 6899999876544
No 36
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.92 E-value=8.5e-25 Score=188.41 Aligned_cols=108 Identities=16% Similarity=0.061 Sum_probs=92.8
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHH--HHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF--VETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~--a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~ 207 (263)
..++|||+.++|+ ++|++++|+||++... ....+.+ +++..+|+.|++++ .||+|+++..+++++|++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4689999999999 7899999999987654 4444553 78889999999865 35999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 208 RLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+|+||||+..|+++|++ +|+++|+|+++....+.|...
T Consensus 171 ~~l~i~D~~~di~aA~~----aG~~~i~v~~~~~~~~~l~~~ 208 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAA----LGITTIKVSDEEQAIHDLEKA 208 (211)
T ss_pred HeEEEcCCHHHHHHHHH----cCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999998 999999999887777766644
No 37
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.91 E-value=5.6e-24 Score=181.59 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=90.5
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
.++|||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.|++++ .||+|+++..+++++|++|++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 479999999999 77999999999999999999995 99999999999875 35999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
||||+.+|+++|++ +|+++|+|.-+
T Consensus 170 ~vgD~~~Di~~A~~----~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNPWDLGGAKK----FGFKTAWVNRP 194 (198)
T ss_pred EEeCCHHHHHHHHH----CCCcEEEecCC
Confidence 99999999999997 99999999865
No 38
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.91 E-value=3.1e-24 Score=176.30 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=88.7
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
..++|||+.++|+ ++|++++|+||.+...++..+++ +|+..+|+.+++++ .||+|+.+..+++++|++|+++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4589999999999 69999999999999999999996 99999999999865 3599999999999999999999
Q ss_pred EEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 210 HFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 210 l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
+||||+..|+++|++ +|+.+|+|
T Consensus 154 ~~vgD~~~d~~~A~~----~G~~~i~v 176 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKE----AGIKTIWV 176 (176)
T ss_dssp EEEESSHHHHHHHHH----TTSEEEEE
T ss_pred EEEeCCHHHHHHHHH----cCCeEEeC
Confidence 999999999999998 99999986
No 39
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.91 E-value=4.3e-24 Score=188.67 Aligned_cols=100 Identities=8% Similarity=-0.086 Sum_probs=86.1
Q ss_pred ccCCCCcccHHHHHH---hCCCcEEEEcCC----chHHHHHHHHHhhCCCCCCceEEcCCCC--CcHHHHHHHHhhCCCC
Q 024758 135 IGANRLYPGVSDALK---LASSRIYIVTSN----QSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQ 205 (263)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~laI~TnK----~~~~a~~iL~~~~gl~~~f~~v~G~~~~--pkp~~l~~~l~~l~~~ 205 (263)
...+.++||+.++|+ ++|++++||||| ++..++.++++ +|+..+|+.|+|++.. +||+.. .+++++++
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i- 186 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI- 186 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCCCCHH-HHHHhCCC-
Confidence 445689999999999 899999999998 88899999995 9999999999997642 566555 45666776
Q ss_pred CCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 206 ~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
++||||+.+|+.+|++ ||+++++|+|||++..
T Consensus 187 ---~i~vGDs~~DI~aAk~----AGi~~I~V~~g~~s~~ 218 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKE----AGARGIRILRASNSTY 218 (237)
T ss_pred ---eEEEeCCHHHHHHHHH----CCCCEEEEEecCCCCC
Confidence 6999999999999997 9999999999999764
No 40
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.90 E-value=1.1e-22 Score=166.72 Aligned_cols=85 Identities=19% Similarity=0.222 Sum_probs=77.8
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC---CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~---~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
...++||+.++|+ ++|++++|+||+++..+...++. + +..+|+.|++++ .||+|+++.++++++|+++ +|+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 3467899999999 78999999999999999999995 7 888999999865 3599999999999999999 999
Q ss_pred EEcCChhhHHHhhc
Q 024758 211 FVEDRLATLKNVIK 224 (263)
Q Consensus 211 ~VGDs~~Di~aA~~ 224 (263)
||||+..|+++|++
T Consensus 139 ~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 139 HVGDNLNDIEGARN 152 (154)
T ss_pred EEeCCHHHHHHHHH
Confidence 99999999999987
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.89 E-value=1.5e-22 Score=173.49 Aligned_cols=106 Identities=12% Similarity=0.146 Sum_probs=93.9
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
.+|||+.++|+ ++|++++|+||++.......+.+..++..+|+.|++++ .||+|+++..+++++|++|++|+|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 58999999999 78999999999999988877764248889999999875 359999999999999999999999
Q ss_pred EcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 212 VEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
|||+..|+++|++ +|+++++++++..-++.|..
T Consensus 164 vgD~~~di~aA~~----aG~~~i~~~~~~~~~~~l~~ 196 (199)
T PRK09456 164 FDDNADNIEAANA----LGITSILVTDKQTIPDYFAK 196 (199)
T ss_pred eCCCHHHHHHHHH----cCCEEEEecCCccHHHHHHh
Confidence 9999999999998 99999999998776665553
No 42
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.88 E-value=6.7e-22 Score=165.29 Aligned_cols=93 Identities=20% Similarity=0.223 Sum_probs=85.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
.+++||+.++|+ ++|++++|+||.+... ..++.+ +|+..+|+.|++++ .||+|+++..+++++|++|++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 589999999999 7899999999999998 777774 99999999998754 35999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
||||+..|+++|++ +|+.+|+|
T Consensus 162 ~vgD~~~di~aA~~----~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKA----AGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHH----cCCEEEeC
Confidence 99999999999998 99999975
No 43
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.86 E-value=7.7e-22 Score=164.94 Aligned_cols=83 Identities=18% Similarity=0.195 Sum_probs=76.4
Q ss_pred CCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEE
Q 024758 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 137 ~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
...+|||+.++|+ +++|+||++....+..+++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+||
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 3579999999997 5899999999999999995 99999999998865 2599999999999999999999999
Q ss_pred cCChhhHHHhhc
Q 024758 213 EDRLATLKNVIK 224 (263)
Q Consensus 213 GDs~~Di~aA~~ 224 (263)
||+.+|+++|++
T Consensus 163 gD~~~Di~~A~~ 174 (175)
T TIGR01493 163 AAHQWDLIGARK 174 (175)
T ss_pred ecChhhHHHHhc
Confidence 999999999985
No 44
>PLN02954 phosphoserine phosphatase
Probab=99.86 E-value=4.3e-21 Score=166.60 Aligned_cols=116 Identities=16% Similarity=0.264 Sum_probs=87.6
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC--CCCce---------EEcCC-------CCCcHHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT--ITPDR---------LYGLG-------TGPKVNVLK 196 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~--~~f~~---------v~G~~-------~~pkp~~l~ 196 (263)
.++|||+.++|+ ++|++++|+||+.+..++.++++ +|+. .+|+. +.|.+ .++||+.++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 469999999999 88999999999999999999995 9997 35532 33322 127999999
Q ss_pred HHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 197 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 197 ~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
.++++++. ++++||||+.+|+.+|++ +|+.++. .||++...+.. ...|.-++.++++|
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~----~~~~~~~-~~~~~~~~~~~-~~~~~~~i~~~~el 219 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEARKP----GGADLFI-GYGGVQVREAV-AAKADWFVTDFQDL 219 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHhhhc----CCCCEEE-ecCCCccCHHH-HhcCCEEECCHHHH
Confidence 99998875 689999999999999875 7887654 46654433433 23555566666543
No 45
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.85 E-value=2.7e-21 Score=163.34 Aligned_cols=105 Identities=15% Similarity=0.061 Sum_probs=89.7
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhhCCC---------CCCceEEcCCCC----CcHHHHHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAGVT---------ITPDRLYGLGTG----PKVNVLKQLQ 199 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK-~~~~a~~iL~~~~gl~---------~~f~~v~G~~~~----pkp~~l~~~l 199 (263)
...+||||.++|+ ++|++++|+||+ +...++.+|+. +|+. .+|+.+++++.. |.|+++..+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 4689999999999 799999999999 99999999995 9998 999999997643 3344555555
Q ss_pred hhC--CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 200 KKP--EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 200 ~~l--~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
+.+ |++|++|+||||+..|+++|++ ||+++++++||+...+.+
T Consensus 122 ~~~~~gl~p~e~l~VgDs~~di~aA~~----aGi~~i~v~~g~~~~~~~ 166 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRTDNVREVWG----YGVTSCYCPSGMDKGTFK 166 (174)
T ss_pred hcccCCCCHHHeEEEcChhHhHHHHHH----hCCEEEEcCCCccHHHHH
Confidence 555 7999999999999999999997 999999999998766644
No 46
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.85 E-value=3.3e-21 Score=163.08 Aligned_cols=114 Identities=18% Similarity=0.147 Sum_probs=91.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEEcC-----C----CCCc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL-----G----TGPK 191 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~-----~----~~pk 191 (263)
.+|||+.++|+ ++|++++|+||++. +....+|++ +|+ +|+.+++. + .||+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCCCCC
Confidence 68999999999 78999999999973 445567774 777 46766642 1 3599
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhH--hHHHhhhcc
Q 024758 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYA--VALFAKMDV 261 (263)
Q Consensus 192 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~--~~~~~~~~~ 261 (263)
|+++..+++++|+++++++||||+.+|+++|++ +|+++|+|.||+...+ +. ...+ ..++.++.+
T Consensus 106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~----aG~~~i~v~~g~~~~~-~~-~~~~~~~~ii~~l~e 171 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAA----AGVTPVLVRTGKGVTT-LA-EGAAPGTWVLDSLAD 171 (181)
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHH----CCCeEEEEcCCCCchh-hh-cccCCCceeecCHHH
Confidence 999999999999999999999999999999998 9999999999987443 32 2334 556666654
No 47
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.83 E-value=4.8e-20 Score=159.48 Aligned_cols=91 Identities=16% Similarity=0.122 Sum_probs=79.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE------------EcCCC--CCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------------YGLGT--GPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v------------~G~~~--~pkp~~l~~~l~ 200 (263)
.+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+.. .|... +|||+++..+++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 579999999999 78999999999999999999996 9998888532 22211 269999999999
Q ss_pred hCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 201 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
++++++++|+||||+.+|+.+|++ +|+.+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~----ag~~i 191 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKA----AGLGI 191 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHh----CCCeE
Confidence 999999999999999999999997 89864
No 48
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.82 E-value=8.5e-20 Score=155.11 Aligned_cols=97 Identities=10% Similarity=0.031 Sum_probs=81.3
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-C-------------CCcHHHHHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------GPKVNVLKQLQ 199 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~-------------~pkp~~l~~~l 199 (263)
..++|||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.++..+ . .+|++.+..++
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 3579999999999 78999999999999999999995 99988776554321 1 13457888999
Q ss_pred hhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcC
Q 024758 200 KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 200 ~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~w 238 (263)
+++++++++++|||||.+|+.+|++ ||++++.-.-
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~----ag~~~a~~~~ 191 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEV----ADISISLGDE 191 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHh----cCCeEEECCC
Confidence 9999999999999999999999987 8997765443
No 49
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.81 E-value=2.6e-19 Score=153.25 Aligned_cols=94 Identities=15% Similarity=0.062 Sum_probs=74.3
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEE---------cCCCCCcHHHHHHHHhhCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY---------GLGTGPKVNVLKQLQKKPEH 204 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~---------G~~~~pkp~~l~~~l~~l~~ 204 (263)
..++|||+.++|+ ++ ++++|+||+....++.++++ +|+..+|+..+ |.+ .++|+....++++++.
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~-~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYD-LRQPDGKRQAVKALKS 142 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECcc-ccccchHHHHHHHHHH
Confidence 4689999999999 55 99999999999999999996 99988875432 222 2455555666667777
Q ss_pred CCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCC
Q 024758 205 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 205 ~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
.+++++|||||.+|+.++++ +|+ +|.|++
T Consensus 143 ~~~~~v~iGDs~~D~~~~~a----a~~---~v~~~~ 171 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGE----ADA---GILFRP 171 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHh----CCC---CEEECC
Confidence 78899999999999999987 776 344665
No 50
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.80 E-value=2e-19 Score=158.85 Aligned_cols=99 Identities=11% Similarity=-0.008 Sum_probs=83.2
Q ss_pred ccccCCCCcccHHHHHH---hCCCcEEEEcC----CchHHHHHHHHHhhCC--CCCCceEEcCCC--CCcHHHHHHHHhh
Q 024758 133 TWIGANRLYPGVSDALK---LASSRIYIVTS----NQSRFVETLLRELAGV--TITPDRLYGLGT--GPKVNVLKQLQKK 201 (263)
Q Consensus 133 ~~~~~~~lypGv~e~L~---~~g~~laI~Tn----K~~~~a~~iL~~~~gl--~~~f~~v~G~~~--~pkp~~l~~~l~~ 201 (263)
++...+.||||+.++|+ ++|++++++|| |.+..++.+++. +|+ ..+|+.++|++. +|++.. ++++
T Consensus 108 ~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K~~K~~---~l~~ 183 (237)
T PRK11009 108 GWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQYTKTQ---WLKK 183 (237)
T ss_pred cccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCCCCHHH---HHHh
Confidence 34556899999999999 89999999999 567789999984 999 899999998774 344432 4556
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCCh
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
+++ ++||||+.+|+++|++ ||+++|+|.|||++.
T Consensus 184 ~~i----~I~IGDs~~Di~aA~~----AGi~~I~v~~G~~~~ 217 (237)
T PRK11009 184 KNI----RIFYGDSDNDITAARE----AGARGIRILRAANST 217 (237)
T ss_pred cCC----eEEEcCCHHHHHHHHH----cCCcEEEEecCCCCC
Confidence 666 7999999999999998 999999999999864
No 51
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.80 E-value=2e-19 Score=144.15 Aligned_cols=94 Identities=30% Similarity=0.302 Sum_probs=81.5
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCc--------hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhC-CCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQ--------SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP-EHQG 206 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~--------~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l-~~~~ 206 (263)
.+|||+.++|+ ++|++++|+||++ ...++.++++ +|+..++..+.+...||+|+++..+++++ +++|
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 103 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDP 103 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCChHHHHHHHHHcCCCCh
Confidence 68999999998 7999999999999 8889999995 99974443333323469999999999999 5999
Q ss_pred CcEEEEcC-ChhhHHHhhccCcCCCCcEEEEc
Q 024758 207 LRLHFVED-RLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 207 ~~~l~VGD-s~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
++++|||| +..|+++|++ +|+++|++.
T Consensus 104 ~~~v~IGD~~~~Di~~A~~----~Gi~~i~~~ 131 (132)
T TIGR01662 104 EESVYVGDQDLTDLQAAKR----AGLAFILVA 131 (132)
T ss_pred hheEEEcCCCcccHHHHHH----CCCeEEEee
Confidence 99999999 7999999998 999999874
No 52
>PRK06769 hypothetical protein; Validated
Probab=99.80 E-value=1.3e-19 Score=152.79 Aligned_cols=119 Identities=13% Similarity=-0.021 Sum_probs=94.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchH--------HHHHHHHHhhCCCCCCceEE-cCC----CCCcHHHHHHHHhh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSR--------FVETLLRELAGVTITPDRLY-GLG----TGPKVNVLKQLQKK 201 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~--------~a~~iL~~~~gl~~~f~~v~-G~~----~~pkp~~l~~~l~~ 201 (263)
..+||||.++|+ ++|++++|+||++.. .....++. +|++.+|..+. +++ .||+|+++.+++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 478999999999 789999999999852 23445774 88876654333 222 36999999999999
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCCh------HHHHhhhhHhHHHhhhccc
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLC------HILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~------~~l~~~~~~~~~~~~~~~~ 262 (263)
++.+|++|+||||+..|+++|++ +|+.+|+|.||++.. +++ ....+..++.++++|
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~~~~~l-~~~~~~~~~~~~~el 167 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAK----VNATTILVRTGAGYDALHTYRDKW-AHIEPNYIAENFEDA 167 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHH----CCCeEEEEecCCCchhhhhhhccc-ccCCCcchhhCHHHH
Confidence 99999999999999999999998 999999999999763 222 245577777766543
No 53
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.79 E-value=4.6e-19 Score=154.24 Aligned_cols=91 Identities=14% Similarity=0.121 Sum_probs=71.9
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC--CC--ceEEcCC----CCCcHHHH----------
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--TP--DRLYGLG----TGPKVNVL---------- 195 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~--~f--~~v~G~~----~~pkp~~l---------- 195 (263)
..++|||+.++|+ ++|++++|+||+...+++.+|++ + +.. .+ +..++++ .+|+|++.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 4689999999999 89999999999999999999996 7 643 11 2223322 12555542
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
..++++++..+.+++|||||.+|+.+|++ ||+.+
T Consensus 150 ~~~l~~~~~~~~~~i~iGDs~~Di~aa~~----Ag~~~ 183 (219)
T PRK09552 150 PSLIRKLSDTNDFHIVIGDSITDLEAAKQ----ADKVF 183 (219)
T ss_pred HHHHHHhccCCCCEEEEeCCHHHHHHHHH----CCcce
Confidence 46788889999999999999999999987 89844
No 54
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.79 E-value=8e-18 Score=145.76 Aligned_cols=100 Identities=20% Similarity=0.091 Sum_probs=88.2
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..++||++.+.|+ .+.++++|+||-........|++ +||..+||.|+.++ .||+|+++..+++++|++|++++
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 3689999999999 33388999999999999999996 99999999999876 35999999999999999999999
Q ss_pred EEcCChhhH-HHhhccCcCCCCcEEEEcCCCC
Q 024758 211 FVEDRLATL-KNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 211 ~VGDs~~Di-~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
||||+.... .+|++ +|+++|++.-+..
T Consensus 176 ~VgD~~~~di~gA~~----~G~~~vwi~~~~~ 203 (229)
T COG1011 176 FVGDSLENDILGARA----LGMKTVWINRGGK 203 (229)
T ss_pred EECCChhhhhHHHHh----cCcEEEEECCCCC
Confidence 999998666 99987 9999998876653
No 55
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.79 E-value=3.1e-19 Score=150.55 Aligned_cols=116 Identities=20% Similarity=0.153 Sum_probs=95.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEEcC------------C
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL------------G 187 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~------------~ 187 (263)
.++||||.++|+ ++|++++|+||++. .....++++ +|+. |+.++.. +
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCcccccccCC
Confidence 368999999999 79999999999995 455567775 7776 6665531 1
Q ss_pred ---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE-EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 188 ---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 188 ---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~-v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
.||+|+++..+++++|+++++|+||||+.+||++|++ ||+++ ++|.||++....+ ...|..+++++++|
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~----aG~~~~i~v~~g~~~~~~~--~~~ad~~i~~~~el 174 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVA----AKVKTNVLVRTGKPITPEA--ENIADWVLNSLADL 174 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHH----CCCcEEEEEecCCcccccc--cccCCEEeccHHHh
Confidence 3599999999999999999999999999999999998 99998 8999998743322 24577888887765
No 56
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.78 E-value=1.1e-17 Score=146.39 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=91.5
Q ss_pred HHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh---CCCCCCceEEcCC--CCCcHHHHHH
Q 024758 126 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGLG--TGPKVNVLKQ 197 (263)
Q Consensus 126 y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~---gl~~~f~~v~G~~--~~pkp~~l~~ 197 (263)
|++.|..+ ....++|||+.++|+ ++|++++|+||++....+.++++ + ++..+|+.++... .||+|+++..
T Consensus 83 w~~~Y~~~-~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~g~KP~p~~y~~ 160 (220)
T TIGR01691 83 WRQGYESG-ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTVGLKTEAQSYVK 160 (220)
T ss_pred HHHHHhcC-CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCcccCCCHHHHHH
Confidence 33334333 345689999999999 88999999999999999999884 6 5655555544221 4699999999
Q ss_pred HHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 198 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 198 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
+++++|++|++++||||+..|+++|++ ||+++++|.|+.+.
T Consensus 161 i~~~lgv~p~e~lfVgDs~~Di~AA~~----AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 161 IAGQLGSPPREILFLSDIINELDAARK----AGLHTGQLVRPGND 201 (220)
T ss_pred HHHHhCcChhHEEEEeCCHHHHHHHHH----cCCEEEEEECCCCC
Confidence 999999999999999999999999998 99999999998643
No 57
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.73 E-value=6.6e-17 Score=135.72 Aligned_cols=87 Identities=13% Similarity=0.199 Sum_probs=75.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-----------------------C-C
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----------------------G-P 190 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-----------------------~-p 190 (263)
.+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.|+|.+. + +
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 589999999999 78999999999999999999995 999999999997421 1 5
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 191 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
|++++.+++++. +++++||||+.+|+.+|++ |++-
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~----~d~~ 184 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKL----SDVV 184 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhchHhc----CCcc
Confidence 888888887654 7899999999999999986 6553
No 58
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.72 E-value=2.6e-17 Score=137.55 Aligned_cols=103 Identities=20% Similarity=0.183 Sum_probs=88.5
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhhCCCCCCc-eEEc----CC----CC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPD-RLYG----LG----TG 189 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK---------------~~~~a~~iL~~~~gl~~~f~-~v~G----~~----~~ 189 (263)
..++||||.++|+ ++|++++|+||| +...+..+|++ +|+. |+ .++| ++ .|
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCCCC
Confidence 4589999999999 789999999998 46788999995 9997 65 4455 23 25
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
|+|+++..+++++++++++++||||+.+|+++|++ +|+++++|++|--+-+..
T Consensus 104 P~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~----aGi~~i~~~~~~~~~~~~ 156 (161)
T TIGR01261 104 PKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAEN----LGIRGIQYDEEELNWDMI 156 (161)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH----CCCeEEEEChhhcCHHHH
Confidence 99999999999999999999999999999999998 999999999986554433
No 59
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.70 E-value=6.3e-16 Score=135.08 Aligned_cols=176 Identities=13% Similarity=0.081 Sum_probs=128.1
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
.+++||+||||+||-..+..+.+.-+.+++. + .+ .+......|.+...+. +.+.. ..+
T Consensus 11 ~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk------~-~~-------~~~~~~~mG~~~~eaa--~~~~~-~~~----- 68 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYTEAWQELLDRYGK------P-YP-------WDVKVKSMGKRTSEAA--RLFVK-KLP----- 68 (222)
T ss_pred eeEEEecCCcEEecHHHHHHHHHHHHHHcCC------C-Ch-------HHHHHHHcCCCHHHHH--HHHHh-hcC-----
Confidence 5799999999999999999999988888842 1 11 2233446776665554 33321 000
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEc
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (263)
..++.+++. ........ .......+.||+..++. .+|++++++|
T Consensus 69 ---dp~s~ee~~----------------------~e~~~~~~--------~~~~~~~~~PGa~kLv~~L~~~gip~alat 115 (222)
T KOG2914|consen 69 ---DPVSREEFN----------------------KEEEEILD--------RLFMNSILMPGAEKLVNHLKNNGIPVALAT 115 (222)
T ss_pred ---CCCCHHHHH----------------------HHHHHHHH--------HhccccccCCcHHHHHHHHHhCCCCeeEEe
Confidence 022232221 11111111 22345789999999999 8999999999
Q ss_pred CCchHHHHHHHHHhhC-CCCCCceEEc-CC--C---CCcHHHHHHHHhhCCCCC-CcEEEEcCChhhHHHhhccCcCCCC
Q 024758 160 SNQSRFVETLLRELAG-VTITPDRLYG-LG--T---GPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 160 nK~~~~a~~iL~~~~g-l~~~f~~v~G-~~--~---~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
|.++.....-+++ ++ +...|..++- .+ . ||+|++++.+.+.+|.+| +.|+.++|++..+++|++ ||+
T Consensus 116 ~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~a----agm 190 (222)
T KOG2914|consen 116 SSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKA----AGM 190 (222)
T ss_pred cCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHh----cCC
Confidence 9999999999986 55 7666655553 32 1 399999999999999998 999999999999999997 999
Q ss_pred cEEEEcC
Q 024758 232 NLYLGNL 238 (263)
Q Consensus 232 ~~v~v~w 238 (263)
.+|+|.-
T Consensus 191 ~vi~v~~ 197 (222)
T KOG2914|consen 191 QVVGVAT 197 (222)
T ss_pred eEEEecC
Confidence 9999987
No 60
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.69 E-value=1.1e-17 Score=149.48 Aligned_cols=118 Identities=7% Similarity=-0.080 Sum_probs=95.6
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-------CCCcHHHHHHHHhhCCCCCCc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-------~~pkp~~l~~~l~~l~~~~~~ 208 (263)
-.|+++.+.++ +.+++++|+||++..+....+.. +|+..+|+.+.+.. .||+|+++..++++++.+|++
T Consensus 120 ~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~ 198 (257)
T TIGR01458 120 FSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEE 198 (257)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhh
Confidence 45899999888 57889999999999988888874 89998898777532 259999999999999999999
Q ss_pred EEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHH-HhhhhHhHHHhhhcc
Q 024758 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHIL-LLYLYAVALFAKMDV 261 (263)
Q Consensus 209 ~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l-~~~~~~~~~~~~~~~ 261 (263)
++||||+. +||.+|++ +|+++++|+||....++. .....|..+++++.+
T Consensus 199 ~~~vGD~~~~Di~~a~~----~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~e 249 (257)
T TIGR01458 199 AVMIGDDCRDDVGGAQD----CGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPH 249 (257)
T ss_pred EEEECCCcHHHHHHHHH----cCCeEEEECCCCCChHHhcccCCCCCEEECCHHH
Confidence 99999996 99999998 999999999997655443 223445555555443
No 61
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.69 E-value=9.8e-17 Score=134.90 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=90.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~-~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
..+|||+.++|+ ++|++++|+||++ ...++.++++ +|+..++ ...+|+|+++..+++++++++++++|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 479999999999 7899999999999 6888888885 8875432 2347999999999999999999999999
Q ss_pred CCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 214 DRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 214 Ds~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
|+. .|+++|++ +|+.+|+|+||+++.+.+..++
T Consensus 116 Ds~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~~~~ 149 (170)
T TIGR01668 116 DRLFTDVMGGNR----NGSYTILVEPLVHPDQWFIKRI 149 (170)
T ss_pred CcchHHHHHHHH----cCCeEEEEccCcCCccccchhh
Confidence 998 69999998 9999999999999988776554
No 62
>PRK11590 hypothetical protein; Provisional
Probab=99.67 E-value=1.4e-15 Score=131.84 Aligned_cols=171 Identities=14% Similarity=0.082 Sum_probs=111.6
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHH-HHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAA-RVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~-~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
|+++|||||||+ .+++..+++..+ +++ |++.. ..+.++.++|.|.......+.+
T Consensus 7 k~~iFD~DGTL~--~~d~~~~~~~~~~~~~------g~~~~-------~~~~~~~~ig~~l~~~~~~~~~---------- 61 (211)
T PRK11590 7 RVVFFDLDGTLH--QQDMFGSFLRYLLRRQ------PLNLL-------LVLPLLPVIGLGLLVKGRAARW---------- 61 (211)
T ss_pred eEEEEecCCCCc--ccchHHHHHHHHHHhc------chhhH-------HHhHHHHHhccCcccchhhhhh----------
Confidence 799999999999 677999998888 666 44321 1356778888875432210000
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHH-H---hCCCcEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDAL-K---LASSRIYI 157 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L-~---~~g~~laI 157 (263)
+ ...++ ..+ ..|++++++++..+.|++.|.+. ..+|||+.++| + ++|++++|
T Consensus 62 -----~--~~~~~-------~~~--~~g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~G~~l~I 117 (211)
T PRK11590 62 -----P--MSLLL-------WGC--TFGHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSSDADVWL 117 (211)
T ss_pred -----h--HHHHH-------HHH--HcCCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhCCCEEEE
Confidence 0 00000 000 12556666667777666665431 57799999999 4 57999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC-----C----CC---cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG-----T----GP---KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-----~----~p---kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
||||++..++.+++. +|+.. .+.++|.+ + ++ ..+-+..+-+.++.+...+.+-|||.+|+..-.-
T Consensus 118 vSas~~~~~~~il~~-l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~ 194 (211)
T PRK11590 118 ITGSPQPLVEQVYFD-TPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYF 194 (211)
T ss_pred EeCCcHHHHHHHHHH-ccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHh
Confidence 999999999999995 88633 33455533 1 11 1233344444445566788899999999988764
No 63
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.67 E-value=1.7e-15 Score=139.66 Aligned_cols=101 Identities=14% Similarity=0.122 Sum_probs=82.4
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc----e--------EEcC--CCCCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----R--------LYGL--GTGPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~----~--------v~G~--~~~pkp~~l~~~l~ 200 (263)
.+++||+.++|+ ++|++++|+|+....+++.++++ +|++..+. . +.|. +.+|||+.+.++++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 579999999999 89999999999999999999996 99875332 1 1121 12499999999999
Q ss_pred hCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 201 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
++|+++++|++|||+.+|+.++++ ||+.+ .| +....+.+
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~----AGlgi---A~--nAkp~Vk~ 297 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKA----AGLGI---AY--HAKPKVNE 297 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHH----CCCeE---Ee--CCCHHHHh
Confidence 999999999999999999999987 89744 44 55565554
No 64
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.67 E-value=1.6e-16 Score=144.01 Aligned_cols=98 Identities=18% Similarity=0.051 Sum_probs=90.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCceEEcCC----------C-CCcHHHHHHHHhhC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLG----------T-GPKVNVLKQLQKKP 202 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~-~f~~v~G~~----------~-~pkp~~l~~~l~~l 202 (263)
..+|||+.++|+ ++|++++|+|||+...++.+++. +|+.. +|+.++|.+ . +|+|+++.++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 479999999999 78999999999999999999995 99986 999999975 2 49999999999999
Q ss_pred CC-CCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCC
Q 024758 203 EH-QGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 203 ~~-~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
+. ++++|+||||+.+|+++|++ +||++++|+||-
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a~~----~Gi~~i~v~~g~ 299 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMWRR----IGLECWQVAPGD 299 (300)
T ss_pred hccCceEEEEEcCcHHHHHHHHH----hCCeEEEecCCC
Confidence 88 57999999999999999998 999999999993
No 65
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.66 E-value=3.3e-16 Score=128.43 Aligned_cols=96 Identities=26% Similarity=0.214 Sum_probs=80.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCC--CceEEc-CC----CCCcHH
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTIT--PDRLYG-LG----TGPKVN 193 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~--f~~v~G-~~----~~pkp~ 193 (263)
++|||+.++|+ ++|++++|+||+++ ..+..+|++ +|+... |..+.+ ++ .||+|+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 68999999999 89999999999984 577888995 998632 111222 22 359999
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 194 ~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
++..+++++++++++|+||||+..|+++|++ +|+++|++.-|
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~----~Gi~~v~i~~~ 147 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRLRDLQAARN----AGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHH----CCCCEEEecCC
Confidence 9999999999999999999999999999997 99999998655
No 66
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.64 E-value=4.6e-15 Score=128.34 Aligned_cols=88 Identities=11% Similarity=0.038 Sum_probs=67.4
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc--eEE-------cCC--CCCcHHHHHHHHhhCCC
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-------GLG--TGPKVNVLKQLQKKPEH 204 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~--~v~-------G~~--~~pkp~~l~~~l~~l~~ 204 (263)
.++|||+.++|+ +++.+++|+|++.+.++++++++ +|++.+|. ..+ |.. .++++..+.+.+++.+.
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~ 145 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 145 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCC
Confidence 479999999999 44569999999999999999996 99998875 222 221 22444444444566553
Q ss_pred CCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 205 QGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 205 ~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+++||||+.+|+.+++. ||+++
T Consensus 146 ---~~v~vGDs~nDl~ml~~----Ag~~i 167 (203)
T TIGR02137 146 ---RVIAAGDSYNDTTMLSE----AHAGI 167 (203)
T ss_pred ---CEEEEeCCHHHHHHHHh----CCCCE
Confidence 79999999999999987 78765
No 67
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.62 E-value=1.1e-14 Score=124.34 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=88.7
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCce-EE
Q 024758 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR-LY 184 (263)
Q Consensus 109 ~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~-v~ 184 (263)
|++.+++.+..+.+.+.+. ...+|||+.++|+ ++|++++|+|++++..++.++++ +|++.+|.. +.
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~ 135 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLE 135 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceE
Confidence 7777777666655544321 2378999999998 78999999999999999999995 999877654 22
Q ss_pred c-CC-------C------CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 185 G-LG-------T------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 185 G-~~-------~------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
. .+ . .+|++.+.+++++.+.+++++++||||.+|+.+++. +|.+++
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~----a~~~~~ 195 (202)
T TIGR01490 136 ESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSL----VGHPYV 195 (202)
T ss_pred EcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHh----CCCcEE
Confidence 1 11 1 157788999999999999999999999999999987 787663
No 68
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.61 E-value=3.8e-15 Score=129.26 Aligned_cols=89 Identities=11% Similarity=0.078 Sum_probs=70.1
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC---ceEEcCC----CCCcHHHH----------HH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DRLYGLG----TGPKVNVL----------KQ 197 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f---~~v~G~~----~~pkp~~l----------~~ 197 (263)
..++||+.++|+ ++|++++|+|++....++.+|++ ++...++ +.+++++ .+|+|+.. ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 589999999999 78999999999999999999995 7554333 2334333 12666654 36
Q ss_pred HHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 198 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 198 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
++++++..+++++||||+.+|+.+|++ ||+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~----Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQ----SDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHh----CCe
Confidence 677777788899999999999999987 787
No 69
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.58 E-value=4.3e-15 Score=124.65 Aligned_cols=89 Identities=24% Similarity=0.270 Sum_probs=76.2
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchH------------HHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHH
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSR------------FVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQ 199 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~------------~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l 199 (263)
.+||||.++|+ ++|++++|+|||+.. .++.+|++ +|+.. +.+++.+ .+|+|+++..++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHH
Confidence 48999999999 899999999999974 57889995 99954 4555433 359999999999
Q ss_pred hhCC--CCCCcEEEEcCCh--------hhHHHhhccCcCCCCcEE
Q 024758 200 KKPE--HQGLRLHFVEDRL--------ATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 200 ~~l~--~~~~~~l~VGDs~--------~Di~aA~~~~~~Agi~~v 234 (263)
+++| +++++++||||+. .|+++|++ ||++++
T Consensus 119 ~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~----aGi~~~ 159 (166)
T TIGR01664 119 SQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKN----LGLEFK 159 (166)
T ss_pred HHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHH----CCCCcC
Confidence 9999 9999999999996 69999998 999885
No 70
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.57 E-value=5.6e-16 Score=139.84 Aligned_cols=118 Identities=14% Similarity=0.031 Sum_probs=94.0
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHH-HHHHHhhCCCCCCceEE---cCC----CCCcHHHHHHHHhhCCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~-~iL~~~~gl~~~f~~v~---G~~----~~pkp~~l~~~l~~l~~~~~ 207 (263)
--|||+.++|+ ++|. ++|+|||+..... ..+. ..|+..+|+.+. |.+ .||+|+++..+++++|++|+
T Consensus 143 ~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~-~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~ 220 (279)
T TIGR01452 143 FSYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSR-TPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPA 220 (279)
T ss_pred CCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCc-ccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChh
Confidence 35999999999 4676 8999999985542 2334 256766776664 333 25999999999999999999
Q ss_pred cEEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-------hhHhHHHhhhccc
Q 024758 208 RLHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-------LYAVALFAKMDVL 262 (263)
Q Consensus 208 ~~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-------~~~~~~~~~~~~~ 262 (263)
+++||||+ .+||++|++ +|+++++|+||+++.+++.+. ..|..+++++.+|
T Consensus 221 ~~lmIGD~~~tDI~~A~~----aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 221 RTLMVGDRLETDILFGHR----CGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hEEEECCChHHHHHHHHH----cCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999999 499999997 999999999999999998754 3577777766553
No 71
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.57 E-value=1e-14 Score=128.23 Aligned_cols=210 Identities=15% Similarity=0.148 Sum_probs=132.5
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
|+|.||++|||..+.+........+.+++ |++-. + +++...+......+. . .+|.-+-.
T Consensus 8 ravtfD~~~tLl~~~~~~~~~y~~i~~~~------gl~~~-~-------~~~~~~~~~~~~~~~------~-~~p~~~~~ 66 (237)
T KOG3085|consen 8 RAVTFDAGGTLLATLPPVMEVYCEIAEAY------GLEYD-D-------SLIETIFRKDFKKMS------E-KGPFFGLY 66 (237)
T ss_pred EEEEEeCCCceeecCCccHHHHHHHHHHh------CCCCC-H-------HHHhHhhhHHHHhhc------c-cCCccccc
Confidence 89999999999999999998888888888 44410 0 222222222221110 0 01100000
Q ss_pred ccccC-cchHHHHHhhhhhhhhHHhhhcC-CHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 83 SVAEG-LTVEGILENWLKIKPVIMEEWSE-NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 83 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.+ ++..+. |..+. ...++- ..+..++....+...+...+. ....+..+|+.++|+ ++|..++|
T Consensus 67 ---~g~l~~~~w---w~~lv---~~~f~~~~~~~~~~~~~~~~~~~~s~~~---~~~~~~~~~~~~~lq~lR~~g~~l~i 134 (237)
T KOG3085|consen 67 ---SGELTLSQW---WPKLV---ESTFGKAGIDYEEELLENFSFRLFSTFA---PSAWKYLDGMQELLQKLRKKGTILGI 134 (237)
T ss_pred ---CCcccHHHH---HHHHH---HHHhccccchhHHHHHhhhhhheecccc---ccCceeccHHHHHHHHHHhCCeEEEE
Confidence 01 112111 11111 111111 112222333223333222221 123467889999998 89999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCc
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWN 232 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~ 232 (263)
+||-+.+.= .++.. +|+..|||.|+-+. .||+|+++..+++.+++.|++|++|||+. +|+++|++ +|++
T Consensus 135 isN~d~r~~-~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~----~G~~ 208 (237)
T KOG3085|consen 135 ISNFDDRLR-LLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARN----LGWH 208 (237)
T ss_pred ecCCcHHHH-HHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHH----cCCE
Confidence 999987765 78885 99999999999764 35999999999999999999999999997 56999997 9999
Q ss_pred EEEEcCCCCChHHHHhhhh
Q 024758 233 LYLGNLFRFLCHILLLYLY 251 (263)
Q Consensus 233 ~v~v~wGy~~~~~l~~~~~ 251 (263)
++.|.-.-....++....+
T Consensus 209 ailv~~~~~~~~~~~~~~~ 227 (237)
T KOG3085|consen 209 AILVDNSITALKELEYKLG 227 (237)
T ss_pred EEEEccccchhhhhhhccc
Confidence 9999855444444444443
No 72
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.56 E-value=3e-14 Score=132.65 Aligned_cols=107 Identities=14% Similarity=0.118 Sum_probs=87.2
Q ss_pred cccCCCCcccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhhCCCCCCceE-EcC----C---
Q 024758 134 WIGANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YGL----G--- 187 (263)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~~laI~TnK---------------~~~~a~~iL~~~~gl~~~f~~v-~G~----~--- 187 (263)
+....++||||.++|+ ++|++++|+||| +...+..+++. +|+. |+.+ ++. +
T Consensus 25 ~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~ 101 (354)
T PRK05446 25 SLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCS 101 (354)
T ss_pred CcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCC
Confidence 3455799999999999 789999999997 46678889995 8884 6655 442 2
Q ss_pred -CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 188 -TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 188 -~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
.+|+|+++..+++++++++++++||||+.+|+++|++ +||++|+|.-..-+-++..
T Consensus 102 ~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~----aGi~~I~v~~~~~~~~~i~ 158 (354)
T PRK05446 102 CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAEN----MGIKGIRYARETLNWDAIA 158 (354)
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----CCCeEEEEECCCCCHHHHH
Confidence 3599999999999999999999999999999999997 9999999954333333443
No 73
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.56 E-value=5e-15 Score=118.98 Aligned_cols=85 Identities=19% Similarity=0.070 Sum_probs=78.9
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhhC-------CCCCCceEEcCCCCCcHHHHHHHHhhCC--CC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVLKQLQKKPE--HQ 205 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK-~~~~a~~iL~~~~g-------l~~~f~~v~G~~~~pkp~~l~~~l~~l~--~~ 205 (263)
++|||+.++|+ ++|++++|+||+ +...+..+++. ++ +..+|+.+++++.+|||+++..+++++| ++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 68999999999 789999999999 99999999995 88 8899999999877799999999999999 99
Q ss_pred CCcEEEEcCChhhHHHhhc
Q 024758 206 GLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 206 ~~~~l~VGDs~~Di~aA~~ 224 (263)
|++|+||||+..|+++.++
T Consensus 108 p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 108 PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cceEEEECCCHhHHHHHHh
Confidence 9999999999999987653
No 74
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.54 E-value=9.7e-14 Score=118.36 Aligned_cols=83 Identities=17% Similarity=0.279 Sum_probs=73.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC--CCcHHHHHHHHhhCCCCCCcEEEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~--~pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
.+++||+.++|+ ++|++++|+|+-....+..+.+. +||. +.++-++. +|.|.++.+++++++.++++++||
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~---~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIF---DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSC---SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccc-cccc---cccccccccccccchhHHHHHHHHhcCCCEEEEE
Confidence 478999999999 88999999999999999999996 9993 44444444 688899999999999999999999
Q ss_pred cCChhhHHHhhc
Q 024758 213 EDRLATLKNVIK 224 (263)
Q Consensus 213 GDs~~Di~aA~~ 224 (263)
||+.+|+.++++
T Consensus 202 GDg~nD~~al~~ 213 (215)
T PF00702_consen 202 GDGVNDAPALKA 213 (215)
T ss_dssp ESSGGHHHHHHH
T ss_pred ccCHHHHHHHHh
Confidence 999999999987
No 75
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.54 E-value=7.1e-15 Score=120.83 Aligned_cols=91 Identities=11% Similarity=-0.018 Sum_probs=79.9
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCceEEcCCCC--CcHHHHHHHHhhCCCCCCcEEE
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~-~f~~v~G~~~~--pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
.+.++||+.|+|+ +++++++|+||+++..++.+|++ +|+.. +|+.|++.+.. .||. +.++++++|.+|++|+|
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEE
Confidence 3579999999999 77899999999999999999995 99964 56999987632 5666 88899999999999999
Q ss_pred EcCChhhHHHhhccCcCCCCcE
Q 024758 212 VEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
|||+..|+++|++ |||.+
T Consensus 121 i~Ds~~~~~aa~~----ngI~i 138 (148)
T smart00577 121 IDDSPDSWPFHPE----NLIPI 138 (148)
T ss_pred EECCHHHhhcCcc----CEEEe
Confidence 9999999999986 78765
No 76
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.53 E-value=4.3e-14 Score=117.75 Aligned_cols=86 Identities=21% Similarity=0.214 Sum_probs=72.4
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC--------------CC-C-CcHHHHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL--------------GT-G-PKVNVLKQL 198 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~--------------~~-~-pkp~~l~~~ 198 (263)
.+++||+.++|+ ++|++++|+|+....+++.++++ +|+..+|...+.. .. + .|++.+.++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 468999999999 89999999999999999999995 9998766433221 11 1 578899999
Q ss_pred HhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 199 QKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 199 l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
++++++++++++|||||.+|+.+++.
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~ 176 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKL 176 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhc
Confidence 99999999999999999999999874
No 77
>PRK10444 UMP phosphatase; Provisional
Probab=99.51 E-value=1.4e-14 Score=128.97 Aligned_cols=69 Identities=10% Similarity=-0.007 Sum_probs=59.9
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHh-hhhHhHHHhhhcc
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLL-YLYAVALFAKMDV 261 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~-~~~~~~~~~~~~~ 261 (263)
||+|+++..+++++++++++++||||+. +||++|++ +|+++++|.||+++.+++.+ ...+..+++++.+
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~----~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~e 244 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ----AGLETILVLSGVSTLDDIDSMPFRPSWIYPSVAD 244 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHH----cCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHH
Confidence 5999999999999999999999999996 89999998 99999999999999888864 3456666665544
No 78
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.45 E-value=3.4e-14 Score=126.36 Aligned_cols=118 Identities=11% Similarity=0.089 Sum_probs=82.9
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHH--HH-HHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVET--LL-RELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~--iL-~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~ 208 (263)
...|+.+...+. ++|.+ .|+||.+...-.. ++ .. -.+...++.+.|.+ .||+|+++..+++.+++++++
T Consensus 120 ~~~y~~l~~a~~~l~~g~~-~i~tN~D~~~~~~~~~~~~~-G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~ 197 (249)
T TIGR01457 120 QIDYEKFATATLAIRKGAH-FIGTNGDLAIPTERGLLPGN-GSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREE 197 (249)
T ss_pred CCCHHHHHHHHHHHHCCCe-EEEECCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCccc
Confidence 346777777776 67776 8999976543211 00 10 01111233344443 259999999999999999999
Q ss_pred EEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhcc
Q 024758 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDV 261 (263)
Q Consensus 209 ~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~ 261 (263)
++||||+. +||.+|++ +|+++++|.||++..+++... ..+..+++++.+
T Consensus 198 ~~~VGD~~~~Di~~a~~----~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~ 248 (249)
T TIGR01457 198 TLMVGDNYLTDIRAGID----AGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAE 248 (249)
T ss_pred EEEECCCchhhHHHHHH----cCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhh
Confidence 99999996 89999998 999999999999988877542 445555555443
No 79
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.44 E-value=4.5e-13 Score=119.24 Aligned_cols=102 Identities=11% Similarity=0.033 Sum_probs=71.8
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCc-----hHHHHHHHHHhhCCCC---CCceEEcCCCC-CcHHHHHHHHhhCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQ-----SRFVETLLRELAGVTI---TPDRLYGLGTG-PKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~-----~~~a~~iL~~~~gl~~---~f~~v~G~~~~-pkp~~l~~~l~~l~~~~ 206 (263)
..|+++.++++ ..+..+.|+|+++ +...+.+++. +++.. .+..+-....+ .|+..+..+++.+|+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~ 215 (272)
T PRK10530 137 PTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSM 215 (272)
T ss_pred cceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCH
Confidence 34778887776 4567778888765 3455566663 66541 11111111112 69999999999999999
Q ss_pred CcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 207 ~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+++++|||+.+|+.+++. ||+ +|.||.. .+++.+.
T Consensus 216 ~e~i~~GD~~NDi~m~~~----ag~---~vamgna-~~~lk~~ 250 (272)
T PRK10530 216 KNVVAFGDNFNDISMLEA----AGL---GVAMGNA-DDAVKAR 250 (272)
T ss_pred HHeEEeCCChhhHHHHHh----cCc---eEEecCc-hHHHHHh
Confidence 999999999999999987 885 7888854 5666543
No 80
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.44 E-value=4.3e-12 Score=110.59 Aligned_cols=102 Identities=16% Similarity=0.134 Sum_probs=82.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC------------C--CCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------------T--GPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~------------~--~pkp~~l~~~l~ 200 (263)
.+++||..++++ ++|.+++|+|+-+..+++++.++ +|++..+....-.+ . ..|-+.+.++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 589999999999 89999999999999999999996 99986654443211 1 147789999999
Q ss_pred hCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 201 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
++|.++++++++|||.+|+-.=+. +|.+. -++...++...
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~----ag~~i-----a~n~~~~l~~~ 194 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEA----AGLPI-----AVNPKPKLRAL 194 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHh----CCCCe-----EeCcCHHHHHH
Confidence 999999999999999999988765 66543 45666665543
No 81
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.39 E-value=7e-13 Score=109.73 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=76.0
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 144 v~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
+.+.|+++|++++|+||++...++.++++ +|+..+|+. .+|||+++.++++++|+++++|+||||+.+|+.+++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~ 109 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVME 109 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 45555588999999999999999999995 999877652 268999999999999999999999999999999999
Q ss_pred ccCcCCCCcEEEEcCCC
Q 024758 224 KEPELDGWNLYLGNLFR 240 (263)
Q Consensus 224 ~~~~~Agi~~v~v~wGy 240 (263)
+ +|+. ++|.++.
T Consensus 110 ~----ag~~-~~v~~~~ 121 (154)
T TIGR01670 110 K----VGLS-VAVADAH 121 (154)
T ss_pred H----CCCe-EecCCcC
Confidence 7 8996 7887775
No 82
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.37 E-value=1.1e-12 Score=110.57 Aligned_cols=77 Identities=19% Similarity=0.234 Sum_probs=69.5
Q ss_pred HHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC
Q 024758 147 ALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (263)
Q Consensus 147 ~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 226 (263)
.|+++|++++|+|||++..++.++++ +|+..+|+.+ +|||+.+..+++++++++++++||||+.+|+.+++.
T Consensus 45 ~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~-- 116 (169)
T TIGR02726 45 VLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKR-- 116 (169)
T ss_pred HHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHH--
Confidence 34478999999999999999999995 9999888743 699999999999999999999999999999999997
Q ss_pred cCCCCcE
Q 024758 227 ELDGWNL 233 (263)
Q Consensus 227 ~~Agi~~ 233 (263)
+|+.+
T Consensus 117 --ag~~~ 121 (169)
T TIGR02726 117 --VGLAV 121 (169)
T ss_pred --CCCeE
Confidence 78754
No 83
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.36 E-value=4.2e-12 Score=99.21 Aligned_cols=95 Identities=24% Similarity=0.195 Sum_probs=85.7
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----C----------------CCcHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----T----------------GPKVN 193 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~----------------~pkp~ 193 (263)
..+++||+.++|+ ++|++++|+||.....++..+++ +|+..+|+.+++.. . +|+++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 4689999999999 77999999999999999999996 99988889888753 1 68899
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 194 ~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
.+..+++.++.++++++||||+.+|++++++ +|+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~----~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKA----AGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHH----cCCceeeC
Confidence 9999999999999999999999999999987 79998875
No 84
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.35 E-value=2.3e-12 Score=118.58 Aligned_cols=86 Identities=17% Similarity=0.116 Sum_probs=79.5
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHh----hCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLREL----AGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~----~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
...+|||+.++|+ ++|++++|||||++..+..+|+ + +|+..+|+.+.+. .+|||+.+.++++++|++++++
T Consensus 29 ~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~-~~~~~~~~~~~f~~~~~~-~~pk~~~i~~~~~~l~i~~~~~ 106 (320)
T TIGR01686 29 LSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE-RRKDFILQAEDFDARSIN-WGPKSESLRKIAKKLNLGTDSF 106 (320)
T ss_pred cCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-hCccccCcHHHeeEEEEe-cCchHHHHHHHHHHhCCCcCcE
Confidence 3468999999999 8999999999999999999999 6 7888899998776 3699999999999999999999
Q ss_pred EEEcCChhhHHHhhc
Q 024758 210 HFVEDRLATLKNVIK 224 (263)
Q Consensus 210 l~VGDs~~Di~aA~~ 224 (263)
+||||+..|+.++++
T Consensus 107 vfidD~~~d~~~~~~ 121 (320)
T TIGR01686 107 LFIDDNPAERANVKI 121 (320)
T ss_pred EEECCCHHHHHHHHH
Confidence 999999999999986
No 85
>PLN02645 phosphoglycolate phosphatase
Probab=99.35 E-value=1.6e-13 Score=125.80 Aligned_cols=105 Identities=16% Similarity=0.093 Sum_probs=84.6
Q ss_pred CCcEEEEcCCchHH-HHHHHHHhhCCCCCCceEEcCC---C----CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHh
Q 024758 152 SSRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLG---T----GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNV 222 (263)
Q Consensus 152 g~~laI~TnK~~~~-a~~iL~~~~gl~~~f~~v~G~~---~----~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA 222 (263)
+-.++|+|||+... ....+. +.|+..+|+.+.+.. . ||+|.++..+++++++++++++||||+. +||.+|
T Consensus 186 ~g~~~i~tn~d~~~~~~~~~~-~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A 264 (311)
T PLN02645 186 PGCLFIATNRDAVTHLTDAQE-WAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG 264 (311)
T ss_pred CCCEEEEeCCCCCCCCCCCCC-ccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH
Confidence 45699999999865 344455 378888888888643 1 5999999999999999999999999997 999999
Q ss_pred hccCcCCCCcEEEEcCCCCChHHHHhh---hhHhHHHhhhcc
Q 024758 223 IKEPELDGWNLYLGNLFRFLCHILLLY---LYAVALFAKMDV 261 (263)
Q Consensus 223 ~~~~~~Agi~~v~v~wGy~~~~~l~~~---~~~~~~~~~~~~ 261 (263)
++ +|+++++|+||+++.+++.+. ..|..+++++.+
T Consensus 265 ~~----aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~ 302 (311)
T PLN02645 265 QN----GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISD 302 (311)
T ss_pred HH----cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHH
Confidence 98 999999999999998887642 456555555543
No 86
>PRK08238 hypothetical protein; Validated
Probab=99.32 E-value=1.8e-11 Score=118.36 Aligned_cols=87 Identities=14% Similarity=0.149 Sum_probs=70.4
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC----C--CcHHHHHHHHhhCCCCCCcE
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----G--PKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----~--pkp~~l~~~l~~l~~~~~~~ 209 (263)
+++||+.+.|+ ++|++++|+||+++..+++++++ +|+ ||.++|.+. + +|++.+. +.++ .+++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~---~~l~--~~~~ 142 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALV---EAFG--ERGF 142 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHH---HHhC--ccCe
Confidence 57899999999 89999999999999999999994 988 899998762 2 3444443 4443 3568
Q ss_pred EEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 210 HFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 210 l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
+|+|||.+|+.+++. +| ..+.|.=+
T Consensus 143 ~yvGDS~~Dlp~~~~----A~-~av~Vn~~ 167 (479)
T PRK08238 143 DYAGNSAADLPVWAA----AR-RAIVVGAS 167 (479)
T ss_pred eEecCCHHHHHHHHh----CC-CeEEECCC
Confidence 999999999999987 77 67777544
No 87
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.31 E-value=2.1e-10 Score=99.76 Aligned_cols=106 Identities=14% Similarity=0.127 Sum_probs=74.2
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH----hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEE
Q 024758 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 184 (263)
Q Consensus 109 ~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~----~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~ 184 (263)
|++++++++..+.|++.|.. .+.+|||+.++|+ ++|++++|||||++..++++.+. .++..-. .++
T Consensus 72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~~-~~i 141 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHRL-NLI 141 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-ccccccC-cEE
Confidence 67788777777777776643 2478999999994 47999999999999999999984 6663322 344
Q ss_pred cCC----C-----CC---cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 185 GLG----T-----GP---KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 185 G~~----~-----~p---kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
|.+ . ++ -++-+..+-+.++.+...+.+-|||.+|+..-.-
T Consensus 142 ~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~ 193 (210)
T TIGR01545 142 ASQIERGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAF 193 (210)
T ss_pred EEEeEEeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHh
Confidence 432 1 11 1233333333445455678899999999988754
No 88
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.27 E-value=1.4e-11 Score=104.74 Aligned_cols=79 Identities=20% Similarity=0.244 Sum_probs=70.0
Q ss_pred HHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCc
Q 024758 148 LKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (263)
Q Consensus 148 L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 227 (263)
|+++|++++|+||++...++.++++ +|+..+|+ |. .+||+.+.++++++|+++++++||||+.+|+.++++
T Consensus 60 L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g~--~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~--- 130 (183)
T PRK09484 60 LLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---GQ--SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK--- 130 (183)
T ss_pred HHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---CC--CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH---
Confidence 3478999999999999999999996 99988775 32 378999999999999999999999999999999997
Q ss_pred CCCCcEEEEc
Q 024758 228 LDGWNLYLGN 237 (263)
Q Consensus 228 ~Agi~~v~v~ 237 (263)
+|+.+ +|.
T Consensus 131 -aG~~~-~v~ 138 (183)
T PRK09484 131 -VGLSV-AVA 138 (183)
T ss_pred -CCCeE-ecC
Confidence 89984 463
No 89
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.26 E-value=2.1e-12 Score=94.11 Aligned_cols=69 Identities=14% Similarity=0.004 Sum_probs=60.6
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh-hhhHhHHHhhhcc
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRFLCHILLL-YLYAVALFAKMDV 261 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~-~~~~~~~~~~~~~ 261 (263)
||+|.++..+++++++++++++||||+ ..||++|++ +|+++|+|++|+.+.+++.. ...|.-+++++.+
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~----~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKA----AGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHH----TTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHH----cCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 699999999999999999999999999 999999998 99999999999999887763 3566666666554
No 90
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.25 E-value=2.5e-10 Score=98.50 Aligned_cols=96 Identities=15% Similarity=0.160 Sum_probs=81.5
Q ss_pred CCCcccHHHHHH-hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC--C--------CCcHHHHHHHHhhCCCC-
Q 024758 138 NRLYPGVSDALK-LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--T--------GPKVNVLKQLQKKPEHQ- 205 (263)
Q Consensus 138 ~~lypGv~e~L~-~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~--~--------~pkp~~l~~~l~~l~~~- 205 (263)
.+|=|-.+++|- -+..+..|.||.++.-|.++|++ +||.+.|+.|++-+ . ||.++.+..+++..|+.
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 455566678877 22223899999999999999996 99999999999743 1 38899999999999998
Q ss_pred CCcEEEEcCChhhHHHhhccCcCCCCcEEEEcC
Q 024758 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 206 ~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~w 238 (263)
|.+++|+.||.+.|++|++ -|+.++.|+=
T Consensus 178 p~~t~FfDDS~~NI~~ak~----vGl~tvlv~~ 206 (244)
T KOG3109|consen 178 PRNTYFFDDSERNIQTAKE----VGLKTVLVGR 206 (244)
T ss_pred cCceEEEcCchhhHHHHHh----ccceeEEEEe
Confidence 9999999999999999998 7999988853
No 91
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.23 E-value=4e-12 Score=112.36 Aligned_cols=92 Identities=11% Similarity=0.051 Sum_probs=79.5
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE--EcCC----CCCcHHHHHHHHhhCCCC-CCcE
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL--YGLG----TGPKVNVLKQLQKKPEHQ-GLRL 209 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v--~G~~----~~pkp~~l~~~l~~l~~~-~~~~ 209 (263)
-|||+.++|+ ++|+++ |+|||+.......+.. +|...+|..+ +|.+ .||+|+++..++++++.. ++++
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 216 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRM 216 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3899999998 679997 9999999999888884 8888888766 5654 249999999999999875 6799
Q ss_pred EEEcCC-hhhHHHhhccCcCCCCcEEEEc
Q 024758 210 HFVEDR-LATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 210 l~VGDs-~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
+||||+ .+||.+|++ +|+++++|+
T Consensus 217 ~~vGD~~~~Di~~a~~----~G~~~i~v~ 241 (242)
T TIGR01459 217 LMVGDSFYTDILGANR----LGIDTALVL 241 (242)
T ss_pred EEECCCcHHHHHHHHH----CCCeEEEEe
Confidence 999999 699999997 999999986
No 92
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.22 E-value=3.1e-10 Score=100.19 Aligned_cols=107 Identities=17% Similarity=0.240 Sum_probs=84.5
Q ss_pred CCCCcccHHHHHH-----hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-----CC-----------------
Q 024758 137 ANRLYPGVSDALK-----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG----------------- 189 (263)
Q Consensus 137 ~~~lypGv~e~L~-----~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-----~~----------------- 189 (263)
..++-||+.++++ +.|+.+.|+|....-+++.+|++ .|+...|+.|++.. .+
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 4588999999999 36999999999999999999995 99999999998742 11
Q ss_pred --CcHHHHHHHHhhC---CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 190 --PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 190 --pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
-|..++.+.++.. |.+-.+++||||+.+|.-.+.+ ...-+++.+.=||.-.+.+.
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~---L~~~D~v~~R~~~~l~~~i~ 207 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR---LRPRDVVFPRKGYPLHKLIQ 207 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc---cCCCCEEecCCCChHHHHHh
Confidence 2456777777663 6677899999999999988875 34566788888876554444
No 93
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.14 E-value=2.5e-10 Score=105.86 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=81.4
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh-C-------CCCCCceEEcCCCCC---------------
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA-G-------VTITPDRLYGLGTGP--------------- 190 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~-g-------l~~~f~~v~G~~~~p--------------- 190 (263)
.+.++||+.++|+ ++|++++|+|||+...++.+|+. + | |..|||.|+++..||
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 3677999999999 89999999999999999999995 5 7 899999999875332
Q ss_pred ----cH--------------HHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcC
Q 024758 191 ----KV--------------NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 191 ----kp--------------~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~w 238 (263)
++ -.+..+.+.++.++++++||||+. .||.++++ .+|+++++|.-
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk---~~Gw~TvlI~p 324 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKK---KRGWRTAAIIP 324 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHH---hcCcEEEEEch
Confidence 11 124566777899999999999986 79999983 28999999965
No 94
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.13 E-value=1.3e-10 Score=113.36 Aligned_cols=82 Identities=21% Similarity=0.325 Sum_probs=72.7
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCch------------HHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHh
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQK 200 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~------------~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~ 200 (263)
+||||.+.|+ ++|++++|+||++. ..+..+|++ +|+. |+.++|.+ .||+|.++..+++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 6999999999 89999999999998 468899995 8884 88888864 3599999999999
Q ss_pred hCC----CCCCcEEEEcCChhhHHHhhc
Q 024758 201 KPE----HQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 201 ~l~----~~~~~~l~VGDs~~Di~aA~~ 224 (263)
+++ +++++++||||+..|+++|++
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ 302 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKA 302 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHh
Confidence 985 889999999999999998775
No 95
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.09 E-value=4.6e-10 Score=93.21 Aligned_cols=88 Identities=18% Similarity=0.201 Sum_probs=76.9
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 216 (263)
.=|.+.+.+. ++|+++.|+||+.+..+...+++ +|+. +|.++ .||-+..+.+++++++.++++|+||||..
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~----fi~~A-~KP~~~~fr~Al~~m~l~~~~vvmVGDqL 120 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVP----FIYRA-KKPFGRAFRRALKEMNLPPEEVVMVGDQL 120 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCc----eeecc-cCccHHHHHHHHHHcCCChhHEEEEcchh
Confidence 4477777777 89999999999999999999996 8884 45543 36899999999999999999999999997
Q ss_pred -hhHHHhhccCcCCCCcEEEEc
Q 024758 217 -ATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 217 -~Di~aA~~~~~~Agi~~v~v~ 237 (263)
+|+.+|++ +|++||.|.
T Consensus 121 ~TDVlggnr----~G~~tIlV~ 138 (175)
T COG2179 121 FTDVLGGNR----AGMRTILVE 138 (175)
T ss_pred hhhhhcccc----cCcEEEEEE
Confidence 79999998 999999984
No 96
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.08 E-value=1.1e-09 Score=98.60 Aligned_cols=82 Identities=17% Similarity=0.200 Sum_probs=66.2
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhhCCCC-CCceEEcCCC-CCcHHHHHHHHhhCCCCCCc
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTI-TPDRLYGLGT-GPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~---~~a~~iL~~~~gl~~-~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~ 208 (263)
...++||+.++|+ ++|++++|+||+++ ..+...|++ +|+.. .++.|+..+. .+|+.....+.+..++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 4679999999999 89999999999884 445688885 99975 4577777543 4888888888877776
Q ss_pred EEEEcCChhhHHHhh
Q 024758 209 LHFVEDRLATLKNVI 223 (263)
Q Consensus 209 ~l~VGDs~~Di~aA~ 223 (263)
++||||+..|+....
T Consensus 191 vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 191 VLLFGDNLLDFDDFF 205 (266)
T ss_pred EEEECCCHHHhhhhh
Confidence 799999999997643
No 97
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.07 E-value=1.5e-10 Score=113.60 Aligned_cols=96 Identities=14% Similarity=0.178 Sum_probs=76.8
Q ss_pred ccCCCCcccHHHHHH---hCCC-cEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEE
Q 024758 135 IGANRLYPGVSDALK---LASS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~-~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
....++|||+.++|+ ++|+ +++|+||+++..++.++++ +|++.+|..+. ..+|++.+.++ +...++++
T Consensus 358 ~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l----~~~~~~v~ 429 (536)
T TIGR01512 358 LLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKEL----REKYGPVA 429 (536)
T ss_pred EEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHH----HhcCCEEE
Confidence 344689999999999 8999 9999999999999999996 99988875432 12455555544 44557999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHH
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHI 245 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~ 245 (263)
||||+.+|+.++++ || ++++|||+..+.
T Consensus 430 ~vGDg~nD~~al~~----A~---vgia~g~~~~~~ 457 (536)
T TIGR01512 430 MVGDGINDAPALAA----AD---VGIAMGASGSDV 457 (536)
T ss_pred EEeCCHHHHHHHHh----CC---EEEEeCCCccHH
Confidence 99999999999997 88 599999754333
No 98
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.06 E-value=4e-10 Score=111.06 Aligned_cols=92 Identities=17% Similarity=0.191 Sum_probs=75.4
Q ss_pred cCCCCcccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 136 GANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g-~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
...++|||+.++|+ ++| ++++|+||+++..++.++++ +|++.+|..+.. .+|++.+.++. ..+.+++|
T Consensus 381 ~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~~p---~~K~~~v~~l~----~~~~~v~~ 452 (556)
T TIGR01525 381 LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAELLP---EDKLAIVKELQ----EEGGVVAM 452 (556)
T ss_pred ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccCCH---HHHHHHHHHHH----HcCCEEEE
Confidence 34689999999999 789 99999999999999999995 999887765421 24666555544 35679999
Q ss_pred EcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 212 VEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
|||+.+|+.++++ || ++++||.++
T Consensus 453 vGDg~nD~~al~~----A~---vgia~g~~~ 476 (556)
T TIGR01525 453 VGDGINDAPALAA----AD---VGIAMGAGS 476 (556)
T ss_pred EECChhHHHHHhh----CC---EeEEeCCCC
Confidence 9999999999987 88 799999543
No 99
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.04 E-value=8.8e-10 Score=99.01 Aligned_cols=83 Identities=13% Similarity=-0.006 Sum_probs=61.2
Q ss_pred hCCCcEEEE---cCCchHHHHHHHHHhhCCC----CCCceEEcCCCCCcHHHHHHHHhhCCCCC-CcEEEEcCChhhHHH
Q 024758 150 LASSRIYIV---TSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKN 221 (263)
Q Consensus 150 ~~g~~laI~---TnK~~~~a~~iL~~~~gl~----~~f~~v~G~~~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~a 221 (263)
..++...++ |++....+...++. +++. .+|..|.... .|...+.++++.+|+++ +++++|||+.+|+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m 222 (273)
T PRK00192 146 DREFSEPFLWNGSEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLPM 222 (273)
T ss_pred hcccCCceeecCchHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHHH
Confidence 344444444 77777777788874 7775 4455565544 67888999999999999 999999999999999
Q ss_pred hhccCcCCCCcEEEEcCCC
Q 024758 222 VIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 222 A~~~~~~Agi~~v~v~wGy 240 (263)
.+. +|+. +++.-+.
T Consensus 223 ~~~----ag~~-vam~NA~ 236 (273)
T PRK00192 223 LEA----ADIA-VVVPGPD 236 (273)
T ss_pred HHh----CCee-EEeCCCC
Confidence 987 7753 3454443
No 100
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.03 E-value=1e-08 Score=92.64 Aligned_cols=86 Identities=17% Similarity=0.215 Sum_probs=70.6
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE------EcCC---CC-C--------cHH-H
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------YGLG---TG-P--------KVN-V 194 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v------~G~~---~~-p--------kp~-~ 194 (263)
..++.||+.++|+ ++|++++|+|+.....++.+|++ +|+...+..| +..+ .+ | |.+ +
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 4689999999999 89999999999999999999996 9998777777 4222 11 3 334 4
Q ss_pred HHHHHhhCC--CCCCcEEEEcCChhhHHHhh
Q 024758 195 LKQLQKKPE--HQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 195 l~~~l~~l~--~~~~~~l~VGDs~~Di~aA~ 223 (263)
+..+.+.++ .++++|++|||+.+|+.+|.
T Consensus 198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~ 228 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMAD 228 (277)
T ss_pred HHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence 445777888 88999999999999999985
No 101
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.02 E-value=3e-09 Score=89.35 Aligned_cols=78 Identities=19% Similarity=0.339 Sum_probs=60.9
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-------------CCC----cHHHHHHH---
Q 024758 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------------TGP----KVNVLKQL--- 198 (263)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-------------~~p----kp~~l~~~--- 198 (263)
|++.++|+ ++|+++.|+|+.+...++.+++. +|+...+ ++|.+ .++ |...+.++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 44449998 78999999999999999999995 9987421 33221 012 88888888
Q ss_pred HhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 199 QKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 199 l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
... +.+...+++||||.+|+.+.|
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHhC
Confidence 445 788899999999999998764
No 102
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.02 E-value=8.2e-10 Score=96.00 Aligned_cols=85 Identities=16% Similarity=0.026 Sum_probs=62.1
Q ss_pred cEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC------CC-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC
Q 024758 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (263)
Q Consensus 154 ~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~------~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 226 (263)
.+.+.++++...+...+++ ++.. +..+.+.. .+ +|+..+..+++.+|++++++++|||+.+|+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~-- 191 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEV-- 191 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh--
Confidence 4566777888888888885 6542 33333322 12 79999999999999999999999999999999987
Q ss_pred cCCCCcEEEEcCCCCChHHHHhh
Q 024758 227 ELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 227 ~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+|+. +++.- ..+++.+.
T Consensus 192 --ag~~-vam~N---a~~~vk~~ 208 (230)
T PRK01158 192 --AGFG-VAVAN---ADEELKEA 208 (230)
T ss_pred --cCce-EEecC---ccHHHHHh
Confidence 7774 35543 34555544
No 103
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.02 E-value=2e-09 Score=96.86 Aligned_cols=101 Identities=19% Similarity=0.141 Sum_probs=74.5
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHH------------HHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCC
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRF------------VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE 203 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~------------a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~ 203 (263)
..-|.-..+.+. .+| -..|+||.+... .-..++. .+-... .++| ||.|.++..+++.++
T Consensus 132 ~~~~e~l~~a~~~i~~g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~-~tg~~~--~~~G---KP~~~i~~~al~~~~ 204 (269)
T COG0647 132 TLTYEKLAEALLAIAAG-APFIATNPDLTVPTERGLRPGAGAIAALLEQ-ATGREP--TVIG---KPSPAIYEAALEKLG 204 (269)
T ss_pred CCCHHHHHHHHHHHHcC-CcEEEeCCCccccCCCCCccCcHHHHHHHHH-hhCCcc--cccC---CCCHHHHHHHHHHhC
Confidence 344555566666 666 568999887544 2233332 221111 3444 589999999999999
Q ss_pred CCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 204 HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 204 ~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
..+++++||||+. +||.+|++ +|++++.|..|.++.+++...
T Consensus 205 ~~~~~~~mVGD~~~TDI~~a~~----~G~~t~LV~TGv~~~~~~~~~ 247 (269)
T COG0647 205 LDRSEVLMVGDRLDTDILGAKA----AGLDTLLVLTGVSSAEDLDRA 247 (269)
T ss_pred CCcccEEEEcCCchhhHHHHHH----cCCCEEEEccCCCChhhhhhh
Confidence 9999999999996 79999997 999999999999988886533
No 104
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.90 E-value=4.1e-09 Score=93.10 Aligned_cols=85 Identities=16% Similarity=0.334 Sum_probs=71.6
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHH--HHHHHhhCCCC-CCceEEcCCCCCcHHHHHHHHhhCCCCCCcEE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVE--TLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~--~iL~~~~gl~~-~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..++|||+.++|+ ++|++++|+|||++.... ..|++ +|+.. +|+.|+++.... .+.+..++++++.++++++
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~~-~~~l~~~~~~~~~~~~~~~ 99 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEIA-VQMILESKKRFDIRNGIIY 99 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHHH-HHHHHhhhhhccCCCceEE
Confidence 4679999999998 789999999999998776 78895 99998 999999876321 2567777788888999999
Q ss_pred EEcCChhhHHHhh
Q 024758 211 FVEDRLATLKNVI 223 (263)
Q Consensus 211 ~VGDs~~Di~aA~ 223 (263)
+|||+..|++...
T Consensus 100 ~vGd~~~d~~~~~ 112 (242)
T TIGR01459 100 LLGHLENDIINLM 112 (242)
T ss_pred EeCCcccchhhhc
Confidence 9999999987653
No 105
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=98.89 E-value=1.2e-08 Score=86.56 Aligned_cols=97 Identities=25% Similarity=0.184 Sum_probs=78.8
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhhCCCCCCceEE-cC--------CCCCc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRLY-GL--------GTGPK 191 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK---------------~~~~a~~iL~~~~gl~~~f~~v~-G~--------~~~pk 191 (263)
.+.||+.+.|. +.|++++|+||. .......+|+. .|. -|+.|+ +. ..||+
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRKP~ 107 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRKPK 107 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccCCC
Confidence 67899999998 899999999994 34445566774 776 345554 32 14599
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 192 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
|-+++.+++++++++++.+||||+..|+++|.+ +|+..+.+.-|.+.
T Consensus 108 ~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n----~gi~~~~~~~~~~~ 154 (181)
T COG0241 108 PGMLLSALKEYNIDLSRSYVVGDRLTDLQAAEN----AGIKGVLVLTGIGV 154 (181)
T ss_pred hHHHHHHHHHhCCCccceEEecCcHHHHHHHHH----CCCCceEEEcCccc
Confidence 999999999999999999999999999999987 89987777766655
No 106
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.87 E-value=1.5e-08 Score=87.87 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=59.4
Q ss_pred CCCcEEE-EcCCchHHHHHHHHHhhCCC----CCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhcc
Q 024758 151 ASSRIYI-VTSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (263)
Q Consensus 151 ~g~~laI-~TnK~~~~a~~iL~~~~gl~----~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 225 (263)
.++.+.+ .|++....+...+++ .|+. .+|..|.+.+. .|+..+..+++.+|++++++++|||+.+|+.+-+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~- 213 (221)
T TIGR02463 137 ASVPLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEV- 213 (221)
T ss_pred CCccEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHh-
Confidence 3455566 667777888888885 7775 44444554332 58888999999999999999999999999999986
Q ss_pred CcCCCCcE
Q 024758 226 PELDGWNL 233 (263)
Q Consensus 226 ~~~Agi~~ 233 (263)
+|..+
T Consensus 214 ---ag~~v 218 (221)
T TIGR02463 214 ---ADYAV 218 (221)
T ss_pred ---CCceE
Confidence 77654
No 107
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.87 E-value=9.5e-09 Score=101.54 Aligned_cols=90 Identities=13% Similarity=0.167 Sum_probs=72.7
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
..+++||+.++|+ ++|++++|+||+++..++.++++ +|++ ++.... .+|++.+.++.+ ++++++||
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~----~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQE----KGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHH----cCCEEEEE
Confidence 3579999999999 78999999999999999999996 9996 333221 256666666543 56899999
Q ss_pred cCChhhHHHhhccCcCCCCcEEEEcCCCCCh
Q 024758 213 EDRLATLKNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 213 GDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
||+.+|+.++++ ||+ ++.||+++.
T Consensus 473 GDg~nD~~al~~----A~v---gia~g~g~~ 496 (562)
T TIGR01511 473 GDGINDAPALAQ----ADV---GIAIGAGTD 496 (562)
T ss_pred eCCCccHHHHhh----CCE---EEEeCCcCH
Confidence 999999999987 884 889997653
No 108
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.85 E-value=2.1e-09 Score=89.75 Aligned_cols=103 Identities=9% Similarity=-0.097 Sum_probs=82.4
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCceEEcCCCC--CcHHHHHHHHhhCCCCCCcEEEE
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~-~f~~v~G~~~~--pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
+..=||+.|+|+ .+.+.++|.|++++..|+.+|++ ++... +|+.+++.+.. .++. +.+.+..+|.+++++|||
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIII 118 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEE
Confidence 456699999999 56699999999999999999995 99875 88999887632 2232 567788889999999999
Q ss_pred cCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 213 EDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 213 GDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
||++.|+.++++ +||.+..-. |=.+..+|.
T Consensus 119 DD~~~~~~~~~~----NgI~i~~f~-~~~~D~~L~ 148 (162)
T TIGR02251 119 DNSPYSYSLQPD----NAIPIKSWF-GDPNDTELL 148 (162)
T ss_pred eCChhhhccCcc----CEeecCCCC-CCCCHHHHH
Confidence 999999998876 898876555 434555554
No 109
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.84 E-value=6.3e-09 Score=90.01 Aligned_cols=87 Identities=14% Similarity=0.034 Sum_probs=61.5
Q ss_pred CcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC---C---CC-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhcc
Q 024758 153 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL---G---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (263)
Q Consensus 153 ~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~---~---~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 225 (263)
....+.+....+.+..++++ ++... ....+. + .+ +|+..+..+++.+|++++++++|||+.+|+.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~- 183 (225)
T TIGR01482 108 SLVKMRYGIDVDTVREIIKE-LGLNL--VAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEV- 183 (225)
T ss_pred ceEEEeecCCHHHHHHHHHh-cCceE--EEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHh-
Confidence 34566677677788888885 77641 111111 1 12 89999999999999999999999999999999987
Q ss_pred CcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 226 PELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 226 ~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
+|+. +++ | +..+++.+.+
T Consensus 184 ---ag~~-vam--~-Na~~~~k~~A 201 (225)
T TIGR01482 184 ---PGFG-VAV--A-NAQPELKEWA 201 (225)
T ss_pred ---cCce-EEc--C-ChhHHHHHhc
Confidence 7773 445 3 3355565543
No 110
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.75 E-value=2.3e-08 Score=103.00 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=76.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
.+++||+.++|+ ++|++++++|++.+..++.++++ +|++.+|..+ .|+.-.+++++++..+++++||||
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~~-------~p~~K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAGV-------LPDGKAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeCC-------CHHHHHHHHHHHhhcCCEEEEEeC
Confidence 478999999999 88999999999999999999996 9997544322 122223455556667889999999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
+.+|+.++++ ||+ ++.||.++...+.
T Consensus 721 g~nD~~al~~----Agv---gia~g~g~~~a~~ 746 (834)
T PRK10671 721 GINDAPALAQ----ADV---GIAMGGGSDVAIE 746 (834)
T ss_pred CHHHHHHHHh----CCe---eEEecCCCHHHHH
Confidence 9999999987 897 8999987666554
No 111
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.75 E-value=7.7e-08 Score=81.01 Aligned_cols=110 Identities=17% Similarity=0.161 Sum_probs=78.0
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEc-CCchHHHHHHHHHhhCCC----------CCCceEEcCCCCCcHHHHHHHHhh
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVT-SNQSRFVETLLRELAGVT----------ITPDRLYGLGTGPKVNVLKQLQKK 201 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~T-nK~~~~a~~iL~~~~gl~----------~~f~~v~G~~~~pkp~~l~~~l~~ 201 (263)
...++||+|.++|+ ++|++++||| +...+.|+.+|+. +++. .+|+.+-=. .++|...+.++.++
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~-~gsK~~Hf~~i~~~ 119 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIY-PGSKTTHFRRIHRK 119 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEES-SS-HHHHHHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhhee-cCchHHHHHHHHHh
Confidence 35689999999999 8999999999 4556799999995 9999 777764321 23788999999999
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhH
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYA 252 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~ 252 (263)
.|++.++++|+.|....++..++ -||.|+.|.-|- +.+++.+++..
T Consensus 120 tgI~y~eMlFFDDe~~N~~~v~~----lGV~~v~v~~Gl-t~~~~~~gL~~ 165 (169)
T PF12689_consen 120 TGIPYEEMLFFDDESRNIEVVSK----LGVTCVLVPDGL-TWDEFERGLEK 165 (169)
T ss_dssp H---GGGEEEEES-HHHHHHHHT----TT-EEEE-SSS---HHHHHHHHHH
T ss_pred cCCChhHEEEecCchhcceeeEe----cCcEEEEeCCCC-CHHHHHHHHHH
Confidence 99999999999999999999987 899999999985 56777776654
No 112
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.67 E-value=4.6e-08 Score=84.55 Aligned_cols=88 Identities=10% Similarity=-0.011 Sum_probs=62.6
Q ss_pred CcEEEEcCCchHHHHHHHHHhhCCCCCCc---eEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCC
Q 024758 153 SRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 229 (263)
Q Consensus 153 ~~laI~TnK~~~~a~~iL~~~~gl~~~f~---~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 229 (263)
...+++|++....++..+++ .|+..++. .-+......|...+..+++.+|++++++++|||+.+|+.+.+. +
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~----a 182 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRV----V 182 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHh----C
Confidence 44567788888888889985 77653211 1111111278999999999999999999999999999999987 7
Q ss_pred CCcEEEEcCCCCChHHHHhh
Q 024758 230 GWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 230 gi~~v~v~wGy~~~~~l~~~ 249 (263)
|+.+ ++ | +..+++.+.
T Consensus 183 g~~v-am--~-na~~~~k~~ 198 (215)
T TIGR01487 183 GFKV-AV--A-NADDQLKEI 198 (215)
T ss_pred CCeE-Ec--C-CccHHHHHh
Confidence 7643 33 3 335555543
No 113
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.66 E-value=1.3e-07 Score=81.91 Aligned_cols=100 Identities=23% Similarity=0.274 Sum_probs=75.2
Q ss_pred CCCcccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-----CC-----C-------------
Q 024758 138 NRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG-----P------------- 190 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g-~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-----~~-----p------------- 190 (263)
.+.-||+.++++ +.| +.+.|+|-...-|++.+|++ +|+...|..|++.. ++ |
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 467899999999 556 59999999999999999994 99999999988642 11 1
Q ss_pred --cHHHHHHHHhhC---CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 191 --KVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 191 --kp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
|-.++.++.... |+.-++.+||||+-+|+-.-.. ..+.+++.-.-||.
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~---Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLR---LRACDVAMPRKGFP 214 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchh---cccCceecccCCCc
Confidence 223444443332 6677899999999999976654 46677776666764
No 114
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.51 E-value=5.6e-07 Score=80.17 Aligned_cols=53 Identities=9% Similarity=-0.117 Sum_probs=44.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|+++++++.|||+.||+.+-+. +|. +|.-| +..+++.+.+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~----ag~---~vAm~-NA~~~vK~~A 248 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEY----AGV---GVAMG-NAIPSVKEVA 248 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh----CCc---eEEec-CccHHHHHhc
Confidence 78999999999999999999999999999999986 786 44445 4466666554
No 115
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.48 E-value=1.8e-07 Score=82.49 Aligned_cols=85 Identities=12% Similarity=0.054 Sum_probs=60.4
Q ss_pred hCCCcEEEEcCCchHHHH-HHHHHhhCCCCCCceEE---cCC----CCCcHHHHHHHHhhCCCCCCcE-EEEcCCh-hhH
Q 024758 150 LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQGLRL-HFVEDRL-ATL 219 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~-~iL~~~~gl~~~f~~v~---G~~----~~pkp~~l~~~l~~l~~~~~~~-l~VGDs~-~Di 219 (263)
++|-...|+||++.-... .-.. +.|...+++.+. |.. .||+|+++..++++++.+++++ +||||+. +||
T Consensus 142 ~~~~~~~i~tN~d~~~~~~~g~~-~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di 220 (236)
T TIGR01460 142 AEGDVPFIAANRDDLVRLGDGRF-RPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDI 220 (236)
T ss_pred hCCCCeEEEECCCCCCCCCCCcE-eecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHH
Confidence 455357888997742111 0111 133433333332 322 2599999999999999998887 9999998 899
Q ss_pred HHhhccCcCCCCcEEEEcCC
Q 024758 220 KNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 220 ~aA~~~~~~Agi~~v~v~wG 239 (263)
++|++ +|+++++|+||
T Consensus 221 ~~A~~----~G~~~i~v~~G 236 (236)
T TIGR01460 221 LGAKN----AGFDTLLVLTG 236 (236)
T ss_pred HHHHH----CCCcEEEEecC
Confidence 99998 99999999998
No 116
>PRK10976 putative hydrolase; Provisional
Probab=98.46 E-value=6.5e-07 Score=79.65 Aligned_cols=53 Identities=15% Similarity=-0.087 Sum_probs=44.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||. .|++ | +..+++.+.+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~----ag~-~vAm--~-NA~~~vK~~A 242 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSM----AGK-GCIM--G-NAHQRLKDLL 242 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHH----cCC-Ceee--c-CCcHHHHHhC
Confidence 79999999999999999999999999999999986 786 3455 4 4466676654
No 117
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.43 E-value=2.3e-06 Score=72.46 Aligned_cols=83 Identities=16% Similarity=0.259 Sum_probs=61.0
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC-------CCCce----------EEcCC-C--C-CcH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT-------ITPDR----------LYGLG-T--G-PKV 192 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~-------~~f~~----------v~G~~-~--~-pkp 192 (263)
..++=||.++..+ +++++..|+|+-...++..++++ .+-. .+++- |.+.+ + + .||
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~ 149 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS 149 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hccccceeeeEEeecCceEcCCCceeeecCCccccCCCcc
Confidence 3578899999999 89999999999999999999996 6511 11111 11111 1 1 467
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 193 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 193 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
..+.... -+++..+|.||+..|+.+|+.
T Consensus 150 ~vI~~l~----e~~e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 150 SVIHELS----EPNESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred hhHHHhh----cCCceEEEecCCcccccHhhh
Confidence 7666544 356679999999999999986
No 118
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.41 E-value=8.2e-07 Score=92.21 Aligned_cols=99 Identities=12% Similarity=0.100 Sum_probs=77.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-C-------------------CCcHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------------GPKVNV 194 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~-------------------~pkp~~ 194 (263)
.+|+||+.++++ ++|+++.++|++....++.+.++ .|+..+++.+++++ - +..|+-
T Consensus 527 Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred CcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 378999999999 89999999999999999999996 99987666543321 0 144655
Q ss_pred HHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 195 LKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 195 l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
=..+++.++...+.+.||||+.+|+.+.++ |+ ||+.||++..+
T Consensus 606 K~~iv~~lq~~g~~v~mvGDGvND~pAl~~----Ad---VGia~g~~g~~ 648 (884)
T TIGR01522 606 KMKIVKALQKRGDVVAMTGDGVNDAPALKL----AD---IGVAMGQTGTD 648 (884)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHHh----CC---eeEecCCCcCH
Confidence 455555555556789999999999999997 78 59999975333
No 119
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.40 E-value=9.4e-07 Score=75.35 Aligned_cols=93 Identities=16% Similarity=0.106 Sum_probs=59.7
Q ss_pred cccCCCCcccHHHHHH---hCCCcEEEEcCCch-------HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCC
Q 024758 134 WIGANRLYPGVSDALK---LASSRIYIVTSNQS-------RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE 203 (263)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~~laI~TnK~~-------~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~ 203 (263)
.....+|+||+.|+|+ +.|..+.++|+.+. ....+-|++|||-..+-..+++.+ |. .++
T Consensus 68 ~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---K~--------~v~ 136 (191)
T PF06941_consen 68 FFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---KT--------LVG 136 (191)
T ss_dssp TTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---GG--------GC-
T ss_pred hhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---CC--------eEe
Confidence 3445689999999999 77877777776553 356677887677544445666644 21 223
Q ss_pred CCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHH
Q 024758 204 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHI 245 (263)
Q Consensus 204 ~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~ 245 (263)
.+ ++|.|++..+..+.+ +|++++....-|+....
T Consensus 137 ~D----vlIDD~~~n~~~~~~----~g~~~iLfd~p~Nr~~~ 170 (191)
T PF06941_consen 137 GD----VLIDDRPHNLEQFAN----AGIPVILFDQPYNRDES 170 (191)
T ss_dssp -S----EEEESSSHHHSS-SS----ESSEEEEE--GGGTT--
T ss_pred cc----EEecCChHHHHhccC----CCceEEEEcCCCCCCCC
Confidence 33 999999999988765 89999999988876543
No 120
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.39 E-value=4.8e-06 Score=71.07 Aligned_cols=84 Identities=19% Similarity=0.394 Sum_probs=67.6
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC--C------Cc---eEEcCC-------CCCcHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--T------PD---RLYGLG-------TGPKVNVL 195 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~--~------f~---~v~G~~-------~~pkp~~l 195 (263)
..++=|||+|+.+ ++|.+++++|.--..++..+-.+ +||.. - |+ ...|.+ ++.|++.+
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 4578899999998 89999999999999999999996 99964 1 11 112212 23789999
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
..+.+ +.+-..++||||..+|+++..
T Consensus 165 ~~lrk--~~~~~~~~mvGDGatDlea~~ 190 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGATDLEAMP 190 (227)
T ss_pred HHHHh--CCChheeEEecCCccccccCC
Confidence 98877 778888999999999998864
No 121
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.37 E-value=1.5e-06 Score=77.73 Aligned_cols=53 Identities=13% Similarity=-0.110 Sum_probs=43.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|+++++++.|||+.||+.+=+. +|. .|++ | +..+++.+.+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~----ag~-~vAm--~-Na~~~vK~~A 240 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGS----VGR-GFIM--G-NAMPQLRAEL 240 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHH----cCC-ceec--c-CChHHHHHhC
Confidence 78999999999999999999999999999999986 775 3444 4 4566666554
No 122
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.32 E-value=2.2e-05 Score=66.51 Aligned_cols=94 Identities=18% Similarity=0.203 Sum_probs=70.8
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh---CCC----CCCceEEcCCCCCcHHHHHHHHhhCCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~---gl~----~~f~~v~G~~~~pkp~~l~~~l~~l~~~~ 206 (263)
...+||.+.+.|+ ++|++++|-||-+-..-+-+.. |- .|. -|||.-+|. |.....+.++....|.+|
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fg-hs~agdL~~lfsGyfDttiG~--KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFG-HSDAGDLNSLFSGYFDTTIGK--KRESQSYAKIAGDIGLPP 177 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhc-ccccccHHhhhcceeeccccc--cccchhHHHHHHhcCCCc
Confidence 3589999999999 8999999999877554333332 11 222 344443332 133457888999999999
Q ss_pred CcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 207 ~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
.+.+|+-|.+.-+.||+. +|+.++++.
T Consensus 178 ~eilFLSDn~~EL~AA~~----vGl~t~l~~ 204 (229)
T COG4229 178 AEILFLSDNPEELKAAAG----VGLATGLAV 204 (229)
T ss_pred hheEEecCCHHHHHHHHh----cchheeeee
Confidence 999999999999999998 899998764
No 123
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.31 E-value=2.2e-06 Score=75.86 Aligned_cols=90 Identities=14% Similarity=0.147 Sum_probs=61.9
Q ss_pred hCCCcEEEEcCCch-----HHHHHHHHHhhCCCCCCceEEcCC-------CC-CcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024758 150 LASSRIYIVTSNQS-----RFVETLLRELAGVTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (263)
Q Consensus 150 ~~g~~laI~TnK~~-----~~a~~iL~~~~gl~~~f~~v~G~~-------~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~ 216 (263)
+.-+++.+.+.+.. ......+.+ +|+. +..++++. .+ +|...+..+++.+|++++++++|||+.
T Consensus 117 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ 193 (249)
T TIGR01485 117 QRPHKVSFFLDPEAAPEVIKQLTEMLKE-TGLD--VKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG 193 (249)
T ss_pred cCCeeEEEEechhhhhHHHHHHHHHHHh-cCCC--EEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh
Confidence 34466667665432 223444553 4553 23444431 12 899999999999999999999999999
Q ss_pred hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 217 ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 217 ~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+|+.+.+. ++..+|+|. +..+++.+.
T Consensus 194 ND~~ml~~----~~~~~va~~---na~~~~k~~ 219 (249)
T TIGR01485 194 NDIELFEI----GSVRGVIVS---NAQEELLQW 219 (249)
T ss_pred hHHHHHHc----cCCcEEEEC---CCHHHHHHH
Confidence 99999985 577888884 446666654
No 124
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.25 E-value=1.6e-06 Score=72.09 Aligned_cols=82 Identities=13% Similarity=0.113 Sum_probs=63.1
Q ss_pred cCCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCC-CCC-ceEEcCCC--CCcHHHHHHHHhhCCCCCCcE
Q 024758 136 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGT--GPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 136 ~~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~-~~f-~~v~G~~~--~pkp~~l~~~l~~l~~~~~~~ 209 (263)
..++++||+.++|+ +++++++|+|||++..|..+++. ++.. .+| +.|+|.+. ++...-+. .-++.+.+.+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~---~i~~~d~~~v 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLL---RLFPADESMV 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHH---HHcCCCcccE
Confidence 34689999999999 77799999999999999999995 9988 588 78888653 22211122 2246678899
Q ss_pred EEEcCChhhHHH
Q 024758 210 HFVEDRLATLKN 221 (263)
Q Consensus 210 l~VGDs~~Di~a 221 (263)
++|+|++.=...
T Consensus 131 vivDd~~~~~~~ 142 (156)
T TIGR02250 131 VIIDDREDVWPW 142 (156)
T ss_pred EEEeCCHHHhhc
Confidence 999999855444
No 125
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.24 E-value=5.3e-06 Score=84.65 Aligned_cols=92 Identities=15% Similarity=0.122 Sum_probs=72.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
.+++||+.++|+ ++|++++|+|+..+..++.+.++ +||+.++. .....|++.+.++.+ +.+++||||
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~----~~p~~K~~~v~~l~~-----~~~v~mvGD 636 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG----LLPEDKVKAVTELNQ-----HAPLAMVGD 636 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC----CCHHHHHHHHHHHhc-----CCCEEEEEC
Confidence 489999999999 78999999999999999999996 99964332 111147776666432 357999999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
+.||+.+.++ |+ ||+.||.++....
T Consensus 637 giNDapAl~~----A~---vgia~g~~~~~a~ 661 (741)
T PRK11033 637 GINDAPAMKA----AS---IGIAMGSGTDVAL 661 (741)
T ss_pred CHHhHHHHHh----CC---eeEEecCCCHHHH
Confidence 9999999987 77 7999998765543
No 126
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.23 E-value=1e-05 Score=71.60 Aligned_cols=52 Identities=12% Similarity=-0.042 Sum_probs=42.4
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
.|...+..+++.++++++++++|||+.+|+.+.+. +|+. +++ | +..+++.+.
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----~~~~-~a~--~-na~~~~k~~ 239 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEA----AGYG-VAM--G-NADEELKAL 239 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHh----CCce-eEe--c-CchHHHHHh
Confidence 78999999999999999999999999999999987 7864 333 4 345555543
No 127
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.21 E-value=1.2e-05 Score=70.49 Aligned_cols=90 Identities=9% Similarity=-0.134 Sum_probs=58.1
Q ss_pred CCCcEEEEcCCch----HHHHHHHHHhhCCCCCCceEEcC----C---CC-CcHHHHHHHHhhCCCCCCcEEEEcCChhh
Q 024758 151 ASSRIYIVTSNQS----RFVETLLRELAGVTITPDRLYGL----G---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLAT 218 (263)
Q Consensus 151 ~g~~laI~TnK~~----~~a~~iL~~~~gl~~~f~~v~G~----~---~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~D 218 (263)
..+++.+.+.... ..+...+++ +++. +..+++. + .+ +|+..+..+++++|++++++++|||+.+|
T Consensus 111 ~~~~i~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD 187 (236)
T TIGR02471 111 GPFKISYLLDPEGEPILPQIRQRLRQ-QSQA--AKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGND 187 (236)
T ss_pred CCeeEEEEECcccchHHHHHHHHHHh-ccCC--EEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccH
Confidence 3466666554321 233445553 5532 3344443 1 12 89999999999999999999999999999
Q ss_pred HHHhhccCcCCCCcEEEEcCCCCChHHHHhhhh
Q 024758 219 LKNVIKEPELDGWNLYLGNLFRFLCHILLLYLY 251 (263)
Q Consensus 219 i~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~ 251 (263)
+.+.+. +|. ++.+|- ..+++.+.+.
T Consensus 188 ~~ml~~----~~~---~iav~n-a~~~~k~~a~ 212 (236)
T TIGR02471 188 EEMLRG----LTL---GVVVGN-HDPELEGLRH 212 (236)
T ss_pred HHHHcC----CCc---EEEEcC-CcHHHHHhhc
Confidence 999975 663 334453 4455554443
No 128
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.11 E-value=5.3e-06 Score=69.13 Aligned_cols=88 Identities=23% Similarity=0.302 Sum_probs=61.1
Q ss_pred CcccHHHHHH---hCCCcEEEEcCC---ch-----------HHHHHHHHHhhCCCCCCceEEcC--C--CCCcHHHHHHH
Q 024758 140 LYPGVSDALK---LASSRIYIVTSN---QS-----------RFVETLLRELAGVTITPDRLYGL--G--TGPKVNVLKQL 198 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK---~~-----------~~a~~iL~~~~gl~~~f~~v~G~--~--~~pkp~~l~~~ 198 (263)
++|+|.+.|+ ++|++++|+||- .. ...+.+++. +|+. +...+.. + .||+|-++..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 4579999999 899999999986 22 345566774 6664 3333332 1 45999999999
Q ss_pred HhhCCC----CCCcEEEEcCC-----------hhhHHHhhccCcCCCCcEE
Q 024758 199 QKKPEH----QGLRLHFVEDR-----------LATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 199 l~~l~~----~~~~~l~VGDs-----------~~Di~aA~~~~~~Agi~~v 234 (263)
++.++. +.++++||||+ ..|..-|.| +||++.
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N----~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALN----CGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHH----HT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHH----cCCccc
Confidence 999874 88899999996 688999987 898763
No 129
>PLN02887 hydrolase family protein
Probab=98.09 E-value=3.7e-05 Score=76.38 Aligned_cols=54 Identities=11% Similarity=-0.155 Sum_probs=43.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLY 251 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~ 251 (263)
.|...+..+++.+|+++++++.|||+.||+++-+. ||. +|.-| +..+++.+.+-
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~----AG~---gVAMg-NA~eeVK~~Ad 560 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQL----ASL---GVALS-NGAEKTKAVAD 560 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHH----CCC---EEEeC-CCCHHHHHhCC
Confidence 79999999999999999999999999999999986 786 44445 33555655443
No 130
>PTZ00445 p36-lilke protein; Provisional
Probab=98.09 E-value=1.3e-05 Score=69.65 Aligned_cols=93 Identities=20% Similarity=0.263 Sum_probs=75.2
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEEcCC--------------
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG-------------- 187 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~~-------------- 187 (263)
+=|....+++ +.|++++|||=.++ +.++..|++ -+-+.-...|++.-
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 4566777777 79999999995554 368888884 66665556666421
Q ss_pred -CCCcHHH--H--HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 188 -TGPKVNV--L--KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 188 -~~pkp~~--l--~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
.+|.|++ + .+++++.|+.|++++||.|+...+++|++ .|+.++.++
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~----lGi~ai~f~ 205 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALK----EGYIALHVT 205 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHH----CCCEEEEcC
Confidence 1388888 7 99999999999999999999999999998 899999987
No 131
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.07 E-value=9.7e-06 Score=72.11 Aligned_cols=53 Identities=13% Similarity=-0.094 Sum_probs=41.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|+++++++.|||+.+|+.+=+. +|. +|.=|-. .+++.+.+
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~----ag~---gvam~Na-~~~~k~~A 241 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEV----AGL---GVAMGNA-DEELKELA 241 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHh----cCe---eeeccCC-CHHHHhhC
Confidence 78899999999999999999999999999999875 664 3333433 45555443
No 132
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.06 E-value=1.8e-05 Score=69.36 Aligned_cols=40 Identities=10% Similarity=-0.051 Sum_probs=34.1
Q ss_pred CcHHHHHHHHhhCCC--CCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 190 PKVNVLKQLQKKPEH--QGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 190 pkp~~l~~~l~~l~~--~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
.|+..+..+++.++. +++++++|||+.+|+.+-+. +|+.+
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~----ag~~v 222 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEV----VDLAF 222 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHh----CCCcE
Confidence 788888888888865 67799999999999999986 78754
No 133
>PLN02645 phosphoglycolate phosphatase
Probab=98.05 E-value=1.7e-05 Score=72.89 Aligned_cols=88 Identities=15% Similarity=0.225 Sum_probs=68.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHH---HHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLL---RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL---~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
..+|||+.++|+ ++|++++++||++....+.++ ++ +|+...++.|+++. ..+...++..+....+.+|
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~-----~~~~~~l~~~~~~~~~~V~ 116 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSS-----FAAAAYLKSINFPKDKKVY 116 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehH-----HHHHHHHHhhccCCCCEEE
Confidence 368999999998 799999999999955544444 64 89888888888753 3555666666665556799
Q ss_pred EcCChhhHHHhhccCcCCCCcEEE
Q 024758 212 VEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
|+++..+.+.+++ +|+.+++
T Consensus 117 viG~~~~~~~l~~----~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEELEL----AGFQYLG 136 (311)
T ss_pred EEcCHHHHHHHHH----CCCEEec
Confidence 9999999999986 8988754
No 134
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.99 E-value=4.8e-05 Score=67.50 Aligned_cols=45 Identities=9% Similarity=-0.088 Sum_probs=38.3
Q ss_pred CcHHHHHHHHhhCCCC--CCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 190 PKVNVLKQLQKKPEHQ--GLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~--~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.|...+..+++.+|++ .+++++|||+.+|+.+.+. +|.. |++..+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~----ag~~-vam~Na 222 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEV----VDLA-VVVPGP 222 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHH----CCEE-EEeCCC
Confidence 7888999999999999 9999999999999999986 7754 345444
No 135
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.96 E-value=2.8e-06 Score=78.39 Aligned_cols=52 Identities=13% Similarity=0.013 Sum_probs=43.2
Q ss_pred CCcHHHHHHHHhhC--------CC-----CCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 189 GPKVNVLKQLQKKP--------EH-----QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 189 ~pkp~~l~~~l~~l--------~~-----~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
||+|.++..+++.+ +. ++++++||||+. +||.+|++ +|+.++.|.+|-.+.+
T Consensus 233 KP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~----~G~~silV~tG~~~~~ 298 (321)
T TIGR01456 233 KPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQN----YGWFSCLVKTGVYNGG 298 (321)
T ss_pred CCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHh----CCceEEEecccccCCC
Confidence 48999999887776 33 457999999998 99999987 9999999999944443
No 136
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.94 E-value=5.5e-05 Score=67.84 Aligned_cols=38 Identities=8% Similarity=-0.164 Sum_probs=35.4
Q ss_pred CcHHHHHHHHhhCCC---CCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 190 PKVNVLKQLQKKPEH---QGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 190 pkp~~l~~~l~~l~~---~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
.|...+..+++.+|+ ++++++.|||+.||+.+=+. +|.
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~----ag~ 227 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDV----MDY 227 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHh----CCE
Confidence 789999999999999 99999999999999999886 775
No 137
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=97.94 E-value=7e-05 Score=63.04 Aligned_cols=92 Identities=17% Similarity=0.155 Sum_probs=67.9
Q ss_pred CCCcccHHHHHH---hCCC--cEEEEcCC-------chHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCC-
Q 024758 138 NRLYPGVSDALK---LASS--RIYIVTSN-------QSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEH- 204 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~--~laI~TnK-------~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~- 204 (263)
..+.|.+.+.++ +.+. ++.|+||. ....++.+-+. +|+. .+.-... ||..+.++++.++.
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~k--KP~~~~~i~~~~~~~ 130 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAK--KPGCFREILKYFKCQ 130 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCC--CCccHHHHHHHHhhc
Confidence 467888888888 4554 59999997 47888888885 8863 3333333 44444555555543
Q ss_pred ----CCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCC
Q 024758 205 ----QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 205 ----~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
.|++++||||+. +||.+|.. .|+.+|.|+-|-
T Consensus 131 ~~~~~p~eiavIGDrl~TDVl~gN~----~G~~tilv~~gv 167 (168)
T PF09419_consen 131 KVVTSPSEIAVIGDRLFTDVLMGNR----MGSYTILVTDGV 167 (168)
T ss_pred cCCCCchhEEEEcchHHHHHHHhhc----cCceEEEEecCc
Confidence 599999999997 79999987 899999998874
No 138
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=97.76 E-value=0.00037 Score=63.30 Aligned_cols=57 Identities=19% Similarity=0.044 Sum_probs=52.4
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
||.+.++..++++.++.|++++||||+. +||.-|++ +|+.++.|..|-++.+..+..
T Consensus 224 KP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~----~G~~TLLvltGv~~led~~~~ 281 (306)
T KOG2882|consen 224 KPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKN----CGFKTLLVLSGVTTLEDILEA 281 (306)
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhc----cCcceEEEecCcCcHHHHHhc
Confidence 3899999999999999999999999997 69999997 899999999999988887765
No 139
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.76 E-value=0.00013 Score=76.20 Aligned_cols=94 Identities=17% Similarity=0.164 Sum_probs=70.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC--------c-------------------eEEcCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP--------D-------------------RLYGLG 187 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f--------~-------------------~v~G~~ 187 (263)
-+|+||+.+.++ ++|+++.++|+.....+..+.++ .|+...- + .|++.
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar- 613 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR- 613 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe-
Confidence 368999999999 89999999999999999999996 9995421 1 12221
Q ss_pred CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 188 TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 188 ~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
..|+-=.++++.++...+.+.|+||+.||+.+.++ |++ |+.||.++
T Consensus 614 --~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~----AdV---Gia~g~g~ 659 (917)
T TIGR01116 614 --VEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKK----ADI---GIAMGSGT 659 (917)
T ss_pred --cCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHh----CCe---eEECCCCc
Confidence 12332244444455556788999999999999987 887 88888553
No 140
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.72 E-value=5.3e-05 Score=68.91 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=42.4
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC
Q 024758 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (263)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~ 187 (263)
||+.|+|+ ++|++++|+||++++.+...|++ +|+..||+.|++++
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~G 196 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGG 196 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECC
Confidence 99999999 88999999999999999999996 99999999999865
No 141
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.70 E-value=0.00054 Score=56.90 Aligned_cols=88 Identities=16% Similarity=0.225 Sum_probs=54.4
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHh--hCCCCCCceEEcCC---C--------C--C---cHHHHH
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVE---TLLREL--AGVTITPDRLYGLG---T--------G--P---KVNVLK 196 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~---~iL~~~--~gl~~~f~~v~G~~---~--------~--p---kp~~l~ 196 (263)
.||+.++++ ++|+++.++|+.+...+. ..|+.. .|.......+++.. . . | |.+.+.
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~ 108 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLR 108 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHH
Confidence 477777777 789999999999988774 666631 13222223444322 1 1 2 455666
Q ss_pred HHHhhCCCCCCcEEE-EcCChhhHHHhhccCcCCCCc
Q 024758 197 QLQKKPEHQGLRLHF-VEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 197 ~~l~~l~~~~~~~l~-VGDs~~Di~aA~~~~~~Agi~ 232 (263)
.+.+.+.-..-..+. +|++.+|+++=++ +||+
T Consensus 109 ~i~~~~~~~~~~f~~~~gn~~~D~~~y~~----~gi~ 141 (157)
T smart00775 109 DIKSLFPPQGNPFYAGFGNRITDVISYSA----VGIP 141 (157)
T ss_pred HHHHhcCCCCCCEEEEeCCCchhHHHHHH----cCCC
Confidence 666544322223343 7889999998876 7876
No 142
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.68 E-value=4.9e-05 Score=62.85 Aligned_cols=76 Identities=24% Similarity=0.323 Sum_probs=64.2
Q ss_pred HHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCc
Q 024758 148 LKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (263)
Q Consensus 148 L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 227 (263)
|.+.|++++|+|.+....++.-.+. +|+..+| .|.. .|-..+.++++++++.++++.||||-.+|+-.=++
T Consensus 47 l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~---qG~~--dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~--- 117 (170)
T COG1778 47 LLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLY---QGIS--DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK--- 117 (170)
T ss_pred HHHcCCeEEEEeCCCCHHHHHHHHH-cCCceee---echH--hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH---
Confidence 3378999999999999999999996 9997544 3433 57889999999999999999999999999987766
Q ss_pred CCCCcE
Q 024758 228 LDGWNL 233 (263)
Q Consensus 228 ~Agi~~ 233 (263)
.|.++
T Consensus 118 -vGls~ 122 (170)
T COG1778 118 -VGLSV 122 (170)
T ss_pred -cCCcc
Confidence 56554
No 143
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.59 E-value=0.00016 Score=58.22 Aligned_cols=87 Identities=17% Similarity=0.146 Sum_probs=70.4
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhC------CCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP------EHQGL 207 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l------~~~~~ 207 (263)
.+++||.|+++|+ ..|+-++.+|=+...-+.+.|.. +++..||+.++-....-|-.++.+++..+ .++|.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcc
Confidence 4689999999999 78999999998999999999996 99999999998654333445666666554 47899
Q ss_pred cEEEEcCChhhHHHhhc
Q 024758 208 RLHFVEDRLATLKNVIK 224 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA~~ 224 (263)
+++|+.|+..-+..-..
T Consensus 118 ~Ivy~DDR~iH~~~Iwe 134 (164)
T COG4996 118 EIVYLDDRRIHFGNIWE 134 (164)
T ss_pred eEEEEecccccHHHHHH
Confidence 99999999877665554
No 144
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.56 E-value=0.0026 Score=62.23 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=65.2
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-
Q 024758 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG- 187 (263)
Q Consensus 109 ~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~- 187 (263)
|++.+++++...++.+.|... .++|...+.++++|.. +|+|..++..++.++++++|++ .|+|.+
T Consensus 89 G~~~~el~~~~r~~l~~f~~~---------~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTeL 154 (497)
T PLN02177 89 GLKIRDIELVSRSVLPKFYAE---------DVHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTEL 154 (497)
T ss_pred CCCHHHHHHHHHHHHHHHHHH---------hcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEeccc
Confidence 677777766665555554321 3788888888766654 9999999999999997446775 444432
Q ss_pred ------------CCCc----HHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 188 ------------TGPK----VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 188 ------------~~pk----p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
.+++ .+-+..+.+.+|.+... +..|||.+|...-.-
T Consensus 155 ev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~ 206 (497)
T PLN02177 155 EVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSI 206 (497)
T ss_pred EECcCCEEeeeecCCCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHh
Confidence 1121 12233333445543333 899999999987653
No 145
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.53 E-value=0.0007 Score=59.74 Aligned_cols=81 Identities=19% Similarity=0.126 Sum_probs=57.0
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCCCceEEcCC--CCC------cHHHHHHHHhh-
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLG--TGP------KVNVLKQLQKK- 201 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~iL~~~~gl~~~f~~v~G~~--~~p------kp~~l~~~l~~- 201 (263)
..++.||+.++++ ++|+++.++|+.++.. +..-|++ .|+..+ +.++-.. ... |.+...++.++
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~G 195 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEG 195 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCC
Confidence 3588999999999 8999999999999877 7777885 888755 5555332 222 44444444432
Q ss_pred CCCCCCcEEEEcCChhhHHHhh
Q 024758 202 PEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
..+ ...|||...|+.++-
T Consensus 196 YrI----v~~iGDq~sDl~G~~ 213 (229)
T TIGR01675 196 YRI----WGNIGDQWSDLLGSP 213 (229)
T ss_pred ceE----EEEECCChHHhcCCC
Confidence 223 268999999997653
No 146
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.53 E-value=0.00015 Score=66.16 Aligned_cols=73 Identities=21% Similarity=0.192 Sum_probs=58.1
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-----------------------------
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----------------------------- 188 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----------------------------- 188 (263)
=|||.++|+ ++|++++|+|||+++.+..+|++ +|+..+|+.|+|++.
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~ 228 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVT 228 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCC
Confidence 399999999 89999999999999999999996 999999998887641
Q ss_pred ---C-Cc-HHHHHHHHhhCCCCCCc-EEEEcC
Q 024758 189 ---G-PK-VNVLKQLQKKPEHQGLR-LHFVED 214 (263)
Q Consensus 189 ---~-pk-p~~l~~~l~~l~~~~~~-~l~VGD 214 (263)
. || |.+++..|++.|+.--. .-.|.|
T Consensus 229 ~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDD 260 (303)
T PHA03398 229 DVKNLPKSPRVVLWYLRKKGVNYFKTITLVDD 260 (303)
T ss_pred cccCCCCCCeehHHHHHHcCcceeccEEEecc
Confidence 0 22 67788888888876433 335554
No 147
>PLN02382 probable sucrose-phosphatase
Probab=97.47 E-value=0.001 Score=63.57 Aligned_cols=52 Identities=15% Similarity=-0.118 Sum_probs=43.3
Q ss_pred CcHHHHHHHHhhC---CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 190 PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 190 pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
.|...+..+++++ |+++++++.+||+.||++.=+. +|+..|+| | +..+++.+
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~----ag~~gvam--~-NA~~elk~ 229 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSV----PDVYGVMV--S-NAQEELLQ 229 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhc----CCCCEEEE--c-CCcHHHHH
Confidence 6899999999999 9999999999999999999875 78767777 4 34555654
No 148
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.42 E-value=0.00016 Score=63.78 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=55.4
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhhCCCCCCceEE-cCCC-C------CcHHHHHHHHhh-CC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLY-GLGT-G------PKVNVLKQLQKK-PE 203 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~---~a~~iL~~~~gl~~~f~~v~-G~~~-~------pkp~~l~~~l~~-l~ 203 (263)
++.||+.++++ ++|+++.++||.++. .+..-|++ .|....-..+. +... . -|.+....+.++ +.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~ 193 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR 193 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhccccccccccccccccchHHHHHHHHcCCc
Confidence 78899999999 899999999986654 56666775 88754333333 3222 1 255666666555 34
Q ss_pred CCCCcEEEEcCChhhHHHhh
Q 024758 204 HQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 204 ~~~~~~l~VGDs~~Di~aA~ 223 (263)
+ +++|||...|+..++
T Consensus 194 I----i~~iGD~~~D~~~~~ 209 (229)
T PF03767_consen 194 I----IANIGDQLSDFSGAK 209 (229)
T ss_dssp E----EEEEESSGGGCHCTH
T ss_pred E----EEEeCCCHHHhhccc
Confidence 4 479999999998843
No 149
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.36 E-value=0.0014 Score=65.85 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=35.9
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEE--cCChhhHHHhhccCcCCCCcEE
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFV--EDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~V--GDs~~Di~aA~~~~~~Agi~~v 234 (263)
.|...+..+++.++.+.++++.| ||+.||+.+=+. +|..++
T Consensus 613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~----Ag~gVA 655 (694)
T PRK14502 613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLET----VDSPIL 655 (694)
T ss_pred CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHh----CCceEE
Confidence 78999999999999998888888 999999999876 787543
No 150
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.35 E-value=0.0018 Score=57.63 Aligned_cols=48 Identities=13% Similarity=-0.092 Sum_probs=36.9
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
.|...+..+++++++++++++.+|||-||+..=. .+...|.| |-..++
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~-----~~~~~vvV--~Na~~e 212 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLE-----GGDHGVVV--GNAQPE 212 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHC-----CSSEEEE---TTS-HH
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHc-----CcCCEEEE--cCCCHH
Confidence 6889999999999999999999999999999874 56777666 534444
No 151
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.25 E-value=0.0028 Score=51.11 Aligned_cols=91 Identities=11% Similarity=0.234 Sum_probs=69.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
-++|+.|.+.+. +. +.++|+|.-..-+..++++ ..|+.- +.|... .+|+.=.++++.|+.+-+.++||||
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae-~~gi~~--~rv~a~---a~~e~K~~ii~eLkk~~~k~vmVGn 101 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAE-FVGIPV--ERVFAG---ADPEMKAKIIRELKKRYEKVVMVGN 101 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHH-HcCCce--eeeecc---cCHHHHHHHHHHhcCCCcEEEEecC
Confidence 479999999999 55 9999999999999999999 488753 344421 3455556666677767789999999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
..||+.+-++ |.+-.+-+.-+
T Consensus 102 GaND~laLr~----ADlGI~tiq~e 122 (152)
T COG4087 102 GANDILALRE----ADLGICTIQQE 122 (152)
T ss_pred CcchHHHhhh----cccceEEeccC
Confidence 9999999987 66555444433
No 152
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.21 E-value=0.0014 Score=63.31 Aligned_cols=95 Identities=18% Similarity=0.229 Sum_probs=67.1
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhC--------CCCCCceEEcCCCCC-------------------
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG--------VTITPDRLYGLGTGP------------------- 190 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~g--------l~~~f~~v~G~~~~p------------------- 190 (263)
=|.+..+|+ +.|.++.++||.+-.++..+++..+| |..+||.|+....||
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l 264 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKL 264 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSE
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcc
Confidence 478888888 88999999999999999999996443 568999999643211
Q ss_pred ---c---H---------HHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcC
Q 024758 191 ---K---V---------NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 191 ---k---p---------~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~w 238 (263)
+ + -.+..+.+.+|....+++||||+. .||...++ ..|+++++|-.
T Consensus 265 ~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~---~~gWrT~~Ii~ 325 (448)
T PF05761_consen 265 KWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKK---RHGWRTAAIIP 325 (448)
T ss_dssp ECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHH---HH-SEEEEE-T
T ss_pred ccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhcc---ccceEEEEEeh
Confidence 1 0 135566677788888999999997 69998887 37999999943
No 153
>PLN02423 phosphomannomutase
Probab=97.15 E-value=0.0016 Score=57.83 Aligned_cols=39 Identities=15% Similarity=-0.043 Sum_probs=33.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhhHHHhhccCcCCCCcEEEEc
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
.|...+..++ ++++++.+|| +.||++.-+. -|+.++.|+
T Consensus 189 nKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~----~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFES----ERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhC----CCcceEEeC
Confidence 6777777776 8999999999 7999999974 499999996
No 154
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.77 E-value=0.02 Score=52.42 Aligned_cols=74 Identities=7% Similarity=0.026 Sum_probs=47.3
Q ss_pred EEEcCCchHHHHHHHHHhhCCC----CCCceEEc------------------CCC-C-CcHHHHHHHHhhCCC--CCCcE
Q 024758 156 YIVTSNQSRFVETLLRELAGVT----ITPDRLYG------------------LGT-G-PKVNVLKQLQKKPEH--QGLRL 209 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~----~~f~~v~G------------------~~~-~-pkp~~l~~~l~~l~~--~~~~~ 209 (263)
.+-+..+... +..+++ .|+. ..|-.+.| .+. + +|...+..+.+.+.- .+-.+
T Consensus 152 ~~w~~~~~~~-~~~~~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~t 229 (302)
T PRK12702 152 FSYSGDPARL-REAFAQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKA 229 (302)
T ss_pred eEecCCHHHH-HHHHHH-cCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCceE
Confidence 3445555555 777775 7774 33545555 211 2 677777766665543 34478
Q ss_pred EEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 210 HFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 210 l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
+-+|||+||+..=.. +.+++|-
T Consensus 230 iaLGDspND~~mLe~----~D~~vvi 251 (302)
T PRK12702 230 LGIGCSPPDLAFLRW----SEQKVVL 251 (302)
T ss_pred EEecCChhhHHHHHh----CCeeEEe
Confidence 999999999998865 6776654
No 155
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=96.73 E-value=0.0015 Score=56.68 Aligned_cols=51 Identities=12% Similarity=0.003 Sum_probs=44.0
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChh-hHHHhhccCcCCCCcEEEEcCCCCCh
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~-Di~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
||.|..+..+++.+|++|++++||||-.+ |+-+|++ .||+-|.|..|-.-+
T Consensus 181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~----~GMrgilVkTGK~rp 232 (262)
T KOG3040|consen 181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQA----CGMRGILVKTGKFRP 232 (262)
T ss_pred CCCHHHHHHHHHhcCCChHHheEEccccccchhhHhh----hcceeEEeeccccCC
Confidence 38999999999999999999999999876 5677766 899999999985444
No 156
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.71 E-value=0.006 Score=61.77 Aligned_cols=86 Identities=14% Similarity=0.132 Sum_probs=66.1
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
++-||+.+.++ +.|+++.++|.-....++.+-++ +|+++++ ..-. ..|-+.+....++ ...+.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v~----a~~~PedK~~~v~~lq~~----g~~VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDFI----AEATPEDKIALIRQEQAE----GKLVAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEEE----cCCCHHHHHHHHHHHHHc----CCeEEEECC
Confidence 67899999999 89999999999999999999996 9996533 3221 1355666665443 346899999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
..||.-+-++ |++ |+..|-
T Consensus 517 G~NDapAL~~----Adv---GiAm~~ 535 (675)
T TIGR01497 517 GTNDAPALAQ----ADV---GVAMNS 535 (675)
T ss_pred CcchHHHHHh----CCE---eEEeCC
Confidence 9999999876 774 566663
No 157
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=96.59 E-value=0.027 Score=50.97 Aligned_cols=80 Identities=15% Similarity=0.153 Sum_probs=51.2
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhhCCCCCCceEEc--C-CCC------CcHHHHHHHHhh
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYG--L-GTG------PKVNVLKQLQKK 201 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~---~a~~iL~~~~gl~~~f~~v~G--~-~~~------pkp~~l~~~l~~ 201 (263)
..++.||+.++.+ ++|+++.++|+.++. .+..=|++ .|...+ +.++= . +.. .|.+.-.++.++
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 4678999999999 899999999999864 34455554 677544 33332 2 111 233333333332
Q ss_pred -CCCCCCcEEEEcCChhhHHHh
Q 024758 202 -PEHQGLRLHFVEDRLATLKNV 222 (263)
Q Consensus 202 -l~~~~~~~l~VGDs~~Di~aA 222 (263)
+.+ ...|||...|+.+.
T Consensus 221 GYrI----v~~iGDq~sDl~G~ 238 (275)
T TIGR01680 221 GYNI----VGIIGDQWNDLKGE 238 (275)
T ss_pred CceE----EEEECCCHHhccCC
Confidence 223 26899999999655
No 158
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.56 E-value=0.012 Score=59.58 Aligned_cols=87 Identities=15% Similarity=0.119 Sum_probs=65.4
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
++-||+++.++ +.|+++.++|.-....+..+-++ .|++.+| ..-.. .|-+.+.... -..+-+.|+||
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~----A~~~PedK~~iV~~lQ----~~G~~VaMtGD 511 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFV----AECKPEDKINVIREEQ----AKGHIVAMTGD 511 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEE----cCCCHHHHHHHHHHHH----hCCCEEEEECC
Confidence 67899999999 78999999999999999999996 9997543 32211 3444554433 33455789999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
..||.-+=++ |.+ |+.-|-+
T Consensus 512 GvNDAPALa~----ADV---GIAMgsG 531 (673)
T PRK14010 512 GTNDAPALAE----ANV---GLAMNSG 531 (673)
T ss_pred ChhhHHHHHh----CCE---EEEeCCC
Confidence 9999998876 664 6677733
No 159
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.47 E-value=0.003 Score=53.69 Aligned_cols=40 Identities=15% Similarity=0.028 Sum_probs=36.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+|+..+..++++++.+++++++|||+.+|+.+.+. +|+.+
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~----~~~~v 202 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMFEV----AGLAV 202 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH----cCCce
Confidence 89999999999999999999999999999999986 67654
No 160
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.43 E-value=0.0039 Score=55.09 Aligned_cols=51 Identities=12% Similarity=0.012 Sum_probs=41.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC---cCCCCcEEEEcCCC
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP---ELDGWNLYLGNLFR 240 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~---~~Agi~~v~v~wGy 240 (263)
.|...+..++++++..+.+++||||+.+|+.+.+.+. ..-|..++.|.+|-
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~ 220 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS 220 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC
Confidence 5779999999999999999999999999999998620 11167788887773
No 161
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.41 E-value=0.013 Score=59.42 Aligned_cols=87 Identities=15% Similarity=0.166 Sum_probs=65.6
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
++-||+++.++ +.|+++.++|.-....++.+-++ .|+++ ++..-.. .|-+.+....+ ..+-+.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~----v~A~~~PedK~~iV~~lQ~----~G~~VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDD----FLAEATPEDKLALIRQEQA----EGRLVAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcE----EEccCCHHHHHHHHHHHHH----cCCeEEEECC
Confidence 57899999998 89999999999999999999996 99965 3333221 35555555433 3345789999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
..||.-+=++ |.| |+.-|-+
T Consensus 516 GvNDAPALa~----ADV---GIAMgsG 535 (679)
T PRK01122 516 GTNDAPALAQ----ADV---GVAMNSG 535 (679)
T ss_pred CcchHHHHHh----CCE---eEEeCCC
Confidence 9999988876 664 6666733
No 162
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=96.26 E-value=0.036 Score=49.64 Aligned_cols=100 Identities=18% Similarity=0.253 Sum_probs=73.8
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHhhCCCCCCce------E----E-c-CC------------CC-C
Q 024758 142 PGVSDALK---LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDR------L----Y-G-LG------------TG-P 190 (263)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~---~iL~~~~gl~~~f~~------v----~-G-~~------------~~-p 190 (263)
|.+.++++ ++|+++..+|..+..+.. +-|++ +||+.--.. + . . .. .+ +
T Consensus 84 ~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~ 162 (252)
T PF11019_consen 84 SDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQD 162 (252)
T ss_pred hhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCc
Confidence 45555555 899999999987765544 45554 787532111 0 0 1 11 11 7
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 191 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
|.+++..++.+.|..|+.+|||.|+...+.+..++-...||.++|..|..-.
T Consensus 163 KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~~ 214 (252)
T PF11019_consen 163 KGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGAE 214 (252)
T ss_pred cHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcchh
Confidence 8999999999999999999999999999887776666799999999998543
No 163
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.14 E-value=0.02 Score=58.34 Aligned_cols=94 Identities=16% Similarity=0.246 Sum_probs=69.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
-++-|+..+.++ ++|+++.++|.-.+..++.+-++ +||+.++..+. ..-|.+.+.++.+ ....+.||||
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Aell---PedK~~~V~~l~~----~g~~VamVGD 607 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAELL---PEDKAEIVRELQA----EGRKVAMVGD 607 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhheccCC---cHHHHHHHHHHHh----cCCEEEEEeC
Confidence 368899999998 89999999999999999999996 99965543222 1146677766553 2356899999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
..||.-+=.+ |. ||+.-|-++.-..
T Consensus 608 GINDAPALA~----Ad---VGiAmG~GtDvA~ 632 (713)
T COG2217 608 GINDAPALAA----AD---VGIAMGSGTDVAI 632 (713)
T ss_pred CchhHHHHhh----cC---eeEeecCCcHHHH
Confidence 9999987654 44 4666676554433
No 164
>PTZ00174 phosphomannomutase; Provisional
Probab=96.00 E-value=0.0033 Score=55.66 Aligned_cols=48 Identities=13% Similarity=-0.040 Sum_probs=37.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
.|...+..+++. +++++.||| +.||+.+=+. ++...++|. +.++.+..
T Consensus 188 sKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~----~~~~g~~v~---n~~~~~~~ 239 (247)
T PTZ00174 188 DKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYND----PRTIGHSVK---NPEDTIKI 239 (247)
T ss_pred cHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhc----CCCceEEeC---CHHHHHHH
Confidence 788999999887 689999999 8999999875 566556665 44554443
No 165
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.98 E-value=0.052 Score=48.91 Aligned_cols=72 Identities=17% Similarity=0.264 Sum_probs=50.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~---~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
..++||+.++|+ ++|++++++||.+ ......-|++ +|+....+.|+. ........+++......++++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~t-----s~~~~~~~l~~~~~~~~~v~~ 90 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFS-----SALCAARLLRQPPDAPKAVYV 90 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEec-----HHHHHHHHHHhhCcCCCEEEE
Confidence 468999999998 7899999999954 4444456674 888655555554 334555556654444567888
Q ss_pred EcCC
Q 024758 212 VEDR 215 (263)
Q Consensus 212 VGDs 215 (263)
||+.
T Consensus 91 iG~~ 94 (279)
T TIGR01452 91 IGEE 94 (279)
T ss_pred EcCH
Confidence 9875
No 166
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=95.95 E-value=0.026 Score=47.46 Aligned_cols=89 Identities=18% Similarity=0.094 Sum_probs=58.8
Q ss_pred CcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCC-CCCce--EEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 140 LYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITPDR--LYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 140 lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~-~~f~~--v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
+=.+|...|. ++..+++-+|+...++.+..=.- +.+. ..++. |+|.. .| ..+.+.++++ +|+.|
T Consensus 73 ~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~-l~~q~ih~~~l~i~g~h--~K----V~~vrth~id----lf~ed 141 (194)
T COG5663 73 LAQLVKQVLPSLKEEHRLIYITARKADLTRITYAW-LFIQNIHYDHLEIVGLH--HK----VEAVRTHNID----LFFED 141 (194)
T ss_pred HHHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHH-HHHhccchhhhhhhccc--cc----chhhHhhccC----ccccc
Confidence 3367777787 77788999999988887765442 3221 22333 33432 22 3456677887 99999
Q ss_pred ChhhH-HHhhccCcCCCCcEEEEcCCCCCh
Q 024758 215 RLATL-KNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 215 s~~Di-~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
+.... +.|+ ++|++++...--|+-.
T Consensus 142 ~~~na~~iAk----~~~~~vilins~ynRk 167 (194)
T COG5663 142 SHDNAGQIAK----NAGIPVILINSPYNRK 167 (194)
T ss_pred cCchHHHHHH----hcCCcEEEecCccccc
Confidence 97654 4444 4999999998777643
No 167
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.92 E-value=0.026 Score=43.29 Aligned_cols=71 Identities=20% Similarity=0.297 Sum_probs=43.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
..++||+.|+|+ ++|+++.++||.+... ....|++ +|+..-.+.|+. ........+++. ....++++
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~-~Gi~~~~~~i~t-----s~~~~~~~l~~~-~~~~~v~v 85 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK-LGIPVDEDEIIT-----SGMAAAEYLKEH-KGGKKVYV 85 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH-TTTT--GGGEEE-----HHHHHHHHHHHH-TTSSEEEE
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh-cCcCCCcCEEEC-----hHHHHHHHHHhc-CCCCEEEE
Confidence 579999999999 8999999999987443 3333464 888755566664 234445555542 33556777
Q ss_pred EcCC
Q 024758 212 VEDR 215 (263)
Q Consensus 212 VGDs 215 (263)
||-.
T Consensus 86 lG~~ 89 (101)
T PF13344_consen 86 LGSD 89 (101)
T ss_dssp ES-H
T ss_pred EcCH
Confidence 7754
No 168
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=95.65 E-value=0.043 Score=46.71 Aligned_cols=95 Identities=14% Similarity=0.074 Sum_probs=65.8
Q ss_pred hhccccCCCCcccHHHHHH---hCCCcEEEEcCCch----HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHH--HHHhh
Q 024758 131 FTTWIGANRLYPGVSDALK---LASSRIYIVTSNQS----RFVETLLRELAGVTITPDRLYGLGTGPKVNVLK--QLQKK 201 (263)
Q Consensus 131 ~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~----~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~--~~l~~ 201 (263)
..+|.+.+-|..=+++++. ++|-.++.+|.... ..++.+-+ .|.|......++.++ +|||.-.. ..+..
T Consensus 106 n~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak-~F~i~~m~pv~f~Gd-k~k~~qy~Kt~~i~~ 183 (237)
T COG3700 106 NNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAK-NFHITNMNPVIFAGD-KPKPGQYTKTQWIQD 183 (237)
T ss_pred hcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHh-hcccCCCcceeeccC-CCCcccccccHHHHh
Confidence 3567777778888888888 89999999996543 33444444 588887777777655 34443332 23444
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
-++. ++-|||.+||.+||+ ||++-|-
T Consensus 184 ~~~~----IhYGDSD~Di~AAke----aG~RgIR 209 (237)
T COG3700 184 KNIR----IHYGDSDNDITAAKE----AGARGIR 209 (237)
T ss_pred cCce----EEecCCchhhhHHHh----cCcccee
Confidence 5555 899999999999998 6665543
No 169
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=95.33 E-value=0.066 Score=55.97 Aligned_cols=93 Identities=12% Similarity=0.112 Sum_probs=64.1
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-------------------CCcHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------------GPKVNVL 195 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-------------------~pkp~~l 195 (263)
-+|-|++.+.++ +.|+++.++|.-....+..+-++ .||..- +.+.|.+- +-.|+-=
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 367899999999 89999999999999999999996 999621 23333220 0123322
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.++.+.+.-..+.+.|+||+.||.-+=++ |++ |+.-|
T Consensus 592 ~~iV~~lq~~G~vVam~GDGvNDapALk~----AdV---GIAmg 628 (867)
T TIGR01524 592 SRIIGLLKKAGHTVGFLGDGINDAPALRK----ADV---GISVD 628 (867)
T ss_pred HHHHHHHHhCCCEEEEECCCcccHHHHHh----CCE---EEEeC
Confidence 22222332234568899999999999887 775 44445
No 170
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=95.24 E-value=0.0074 Score=49.46 Aligned_cols=79 Identities=16% Similarity=0.088 Sum_probs=56.4
Q ss_pred CCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCC-CCCCceEEcCCCC---CcHHHHHHHHhhCCCCCCcEEEE
Q 024758 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG---PKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 139 ~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl-~~~f~~v~G~~~~---pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
.+-||+.++|+ .+.+.++|.|+..+..++.+++. +.- ..+|+.++..+.- .+.. .+-++.+|-+.+++|+|
T Consensus 36 ~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~--~KdL~~l~~~~~~vviv 112 (159)
T PF03031_consen 36 KLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSY--IKDLSKLGRDLDNVVIV 112 (159)
T ss_dssp EE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEE--E--GGGSSS-GGGEEEE
T ss_pred eeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhcccccccccccccccccccc--ccchHHHhhccccEEEE
Confidence 56799999999 78899999999999999999996 776 4678888875421 1111 24566777788999999
Q ss_pred cCChhhHH
Q 024758 213 EDRLATLK 220 (263)
Q Consensus 213 GDs~~Di~ 220 (263)
.|++.-..
T Consensus 113 DD~~~~~~ 120 (159)
T PF03031_consen 113 DDSPRKWA 120 (159)
T ss_dssp ES-GGGGT
T ss_pred eCCHHHee
Confidence 99988653
No 171
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.13 E-value=0.057 Score=55.57 Aligned_cols=86 Identities=9% Similarity=0.074 Sum_probs=60.5
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC---ce-----------------------EEcCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DR-----------------------LYGLGT 188 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f---~~-----------------------v~G~~~ 188 (263)
-+|-|++.+.++ +.|+++.++|.-....++.+-++ .||.... +. |++.
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr-- 517 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAE-- 517 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe--
Confidence 378899999999 89999999999999999999996 9996410 00 2221
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
-.|+-=.++.+.+.-...-+.|+||..||.-+=++ |.|
T Consensus 518 -~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~----AdV 555 (755)
T TIGR01647 518 -VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKK----ADV 555 (755)
T ss_pred -cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHh----CCe
Confidence 12322222233333334568999999999998876 665
No 172
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.07 E-value=0.11 Score=54.71 Aligned_cols=93 Identities=12% Similarity=0.102 Sum_probs=64.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-C------------------CCcHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T------------------GPKVNVL 195 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~------------------~pkp~~l 195 (263)
-+|-|++.+.++ ++|+++.++|.-....+..+-++ .||..- ..+-|.+ . +-.|+-=
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~-~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPG-EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCC-CccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 368899999999 89999999999999999999996 999521 2222222 0 0133322
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.++.+.+.-..+-+.|+||..||.-|=++ |.| |+.-|
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~----ADV---GIAmg 663 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGINDAPALRD----ADV---GISVD 663 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchhHHHHHh----CCE---EEEeC
Confidence 22333333334568999999999998886 675 44445
No 173
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=95.06 E-value=0.26 Score=48.13 Aligned_cols=65 Identities=12% Similarity=0.120 Sum_probs=42.8
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC
Q 024758 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (263)
Q Consensus 109 ~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~ 187 (263)
|+..+++++.-.++...|.. + . +-|..-+...++| +.+|+|.-++..++..++.++|. |.|+|.+
T Consensus 75 Gl~~~die~vaRavlpkf~~---~----d--v~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTE 139 (498)
T PLN02499 75 GVHESEIESVARAVLPKFYM---D----D--VDMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSE 139 (498)
T ss_pred CCCHHHHHHHHHHHhhHHHH---h----h--CCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeee
Confidence 67777666665555555422 1 1 2233444444666 99999999999999999975776 5666653
No 174
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.96 E-value=0.13 Score=55.00 Aligned_cols=98 Identities=7% Similarity=-0.044 Sum_probs=65.5
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC----------CceEE-cCCC----------------
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT----------PDRLY-GLGT---------------- 188 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~----------f~~v~-G~~~---------------- 188 (263)
+|-|++.++++ ++|+++.++|.-....+..+-++ .||... -..++ |.+-
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 78899999999 89999999999999999999996 999532 11222 2110
Q ss_pred ---CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 189 ---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 189 ---~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
.-.|+-=.++.+.+.-..+.+.|+||+.||.-+=++ |+| |+.-|.+..+
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~----AdV---GIAmg~~gt~ 776 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKM----ANV---GIAMGINGSD 776 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHh----CCc---cEecCCCccH
Confidence 012322222222232234568899999999998876 675 5555644343
No 175
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.84 E-value=0.11 Score=54.45 Aligned_cols=93 Identities=13% Similarity=0.098 Sum_probs=63.6
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-------------------CCcHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------------GPKVNVL 195 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-------------------~pkp~~l 195 (263)
-+|-|++.+.++ ++|+++.++|.-....+..+-++ .||.. -..+.|.+- +-.|+-=
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~-~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDA-GEVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCc-cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 367899999999 89999999999999999999996 99952 122223220 0123322
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.++.+.+.-...-+.|+||..||.-|=++ |.| |+.-|
T Consensus 627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~----ADV---GIAmg 663 (902)
T PRK10517 627 ERIVTLLKREGHVVGFMGDGINDAPALRA----ADI---GISVD 663 (902)
T ss_pred HHHHHHHHHCCCEEEEECCCcchHHHHHh----CCE---EEEeC
Confidence 22222332234557899999999998887 664 55556
No 176
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=94.55 E-value=0.18 Score=53.14 Aligned_cols=89 Identities=17% Similarity=0.141 Sum_probs=63.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc-----------------------eEEcCCCC-Cc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD-----------------------RLYGLGTG-PK 191 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~-----------------------~v~G~~~~-pk 191 (263)
+|-|++.+.++ ++|+++.++|.-....+..+-++ .||...-. .|++.-+. .|
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 78899999999 89999999999999999999996 99963211 23322211 23
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 192 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
-+++.. +++. ..-+.|+||+.||.-|=++ |.| |+.-|
T Consensus 658 ~~iV~~-lq~~---g~vVam~GDGvNDapALk~----AdV---GIAmg 694 (941)
T TIGR01517 658 QLLVLM-LKDM---GEVVAVTGDGTNDAPALKL----ADV---GFSMG 694 (941)
T ss_pred HHHHHH-HHHC---CCEEEEECCCCchHHHHHh----CCc---ceecC
Confidence 344444 3332 3468999999999999886 664 45556
No 177
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=94.54 E-value=0.021 Score=45.83 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=13.0
Q ss_pred CcEEEEecCcccccC
Q 024758 2 EDLYALDFDGVICDS 16 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (263)
-|+|+||+||||++.
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 079999999999975
No 178
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=94.40 E-value=0.56 Score=41.81 Aligned_cols=102 Identities=15% Similarity=0.113 Sum_probs=76.2
Q ss_pred CCCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc--eEEcCCCC-CcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~--~v~G~~~~-pkp~~l~~~l~~l~~~~~~ 208 (263)
-.|+|.+.++++ +.|+.+.-+++.+...++++.+ +|-+-... ..+|+..+ .+|+.+..+.+..+++
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~--~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~vp--- 177 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADVP--- 177 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCCc---
Confidence 468999999999 5799888677788888888887 67764333 45565544 5799999888775554
Q ss_pred EEEEc---CChhhHHHhhccCcCCCCcEEEEcCCCCC---hHHHHhh
Q 024758 209 LHFVE---DRLATLKNVIKEPELDGWNLYLGNLFRFL---CHILLLY 249 (263)
Q Consensus 209 ~l~VG---Ds~~Di~aA~~~~~~Agi~~v~v~wGy~~---~~~l~~~ 249 (263)
+++| .+..|+..|.+ .|.+.|.|.++... +....++
T Consensus 178 -VI~egGI~tpeda~~Ame----lGAdgVlV~SAIt~a~dP~~ma~a 219 (248)
T cd04728 178 -VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAKAKDPVAMARA 219 (248)
T ss_pred -EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhcCCCCHHHHHHH
Confidence 6776 35778888876 89999999999987 4444433
No 179
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.35 E-value=0.049 Score=43.35 Aligned_cols=14 Identities=14% Similarity=0.422 Sum_probs=13.2
Q ss_pred cEEEEecCcccccC
Q 024758 3 DLYALDFDGVICDS 16 (263)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (263)
|+++|||||||.+.
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 68999999999998
No 180
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=94.27 E-value=0.18 Score=49.24 Aligned_cols=75 Identities=17% Similarity=0.293 Sum_probs=57.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
.++.|++.++++ +.|+++.++|......+..+-++ .|+ ++.-. .-|.+.+..+. -....+.|||
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~----~~g~~v~~vG 413 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQ----KKGRVVAMTG 413 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHH----HCCCEEEEEC
Confidence 478999999999 88999999999999999999996 886 22211 13445555542 2236789999
Q ss_pred CChhhHHHhhc
Q 024758 214 DRLATLKNVIK 224 (263)
Q Consensus 214 Ds~~Di~aA~~ 224 (263)
|..+|..+-++
T Consensus 414 Dg~nD~~al~~ 424 (499)
T TIGR01494 414 DGVNDAPALKK 424 (499)
T ss_pred CChhhHHHHHh
Confidence 99999988775
No 181
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.21 E-value=0.28 Score=52.18 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=35.3
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
+|-|++.+.++ ++|+++.++|+-....+..+.++ .|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 67899999999 89999999999999999999996 9984
No 182
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=94.19 E-value=0.049 Score=46.63 Aligned_cols=53 Identities=11% Similarity=-0.103 Sum_probs=42.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|+++++++.|||+.+|+.+-+. +|.. ++| | +..++++..+
T Consensus 186 sK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~----~~~~-~am--~-na~~~~k~~a 238 (254)
T PF08282_consen 186 SKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLEL----AGYS-VAM--G-NATPELKKAA 238 (254)
T ss_dssp SHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHH----SSEE-EEE--T-TS-HHHHHHS
T ss_pred CHHHHHHHHhhhcccccceeEEeecccccHhHHhh----cCeE-EEE--c-CCCHHHHHhC
Confidence 78999999999999999999999999999999987 6653 445 4 3345565443
No 183
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.71 E-value=0.23 Score=51.43 Aligned_cols=88 Identities=14% Similarity=0.146 Sum_probs=66.3
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
.+-||+..++. +.|++++++|+-....++.+-++ .| ++.|+..-.. .|.+.+.++.++- ..+.||||
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~~----~~VaMVGD 793 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKNG----GPVAMVGD 793 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhcC----CcEEEEeC
Confidence 56788888777 89999999999999999999997 88 5677775432 5778888876643 55799999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
..||--+=.+ |. ||+.=|-++
T Consensus 794 GINDaPALA~----Ad---VGIaig~gs 814 (951)
T KOG0207|consen 794 GINDAPALAQ----AD---VGIAIGAGS 814 (951)
T ss_pred CCCccHHHHh----hc---cceeecccc
Confidence 9999765432 33 455556553
No 184
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=93.48 E-value=0.34 Score=43.16 Aligned_cols=81 Identities=15% Similarity=0.211 Sum_probs=56.3
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHH----HHHHHHHhhCCCCCC--ceEEcCCCCCcHHHHHHHHhhCCCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF----VETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~----a~~iL~~~~gl~~~f--~~v~G~~~~pkp~~l~~~l~~l~~~~~ 207 (263)
.+++-||+.|+|+ ++|..+.-+||..++. +..-|++ +||..-- ..+.=.+.++|..-...+-+.+.
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~---- 194 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDYK---- 194 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhccc----
Confidence 4689999999999 8999999999988776 6666775 8885321 12222333366655555554333
Q ss_pred cEEEEcCChhhHHHh
Q 024758 208 RLHFVEDRLATLKNV 222 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA 222 (263)
=+++|||+..|....
T Consensus 195 iVm~vGDNl~DF~d~ 209 (274)
T COG2503 195 IVMLVGDNLDDFGDN 209 (274)
T ss_pred eeeEecCchhhhcch
Confidence 368999999997543
No 185
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=93.33 E-value=0.55 Score=42.51 Aligned_cols=50 Identities=36% Similarity=0.569 Sum_probs=36.6
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHH---HHHhhCCCCCCceEEcC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGL 186 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~i---L~~~~gl~~~f~~v~G~ 186 (263)
..++|||+.+.|+ ++|+++.++||++....+.+ |+.+.|++-..+.|+.+
T Consensus 22 G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS 77 (269)
T COG0647 22 GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS 77 (269)
T ss_pred CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH
Confidence 3589999999999 89999999999877655533 33224555556777764
No 186
>PRK00208 thiG thiazole synthase; Reviewed
Probab=93.03 E-value=3.1 Score=37.21 Aligned_cols=102 Identities=15% Similarity=0.112 Sum_probs=75.1
Q ss_pred CCCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc--eEEcCCCC-CcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~--~v~G~~~~-pkp~~l~~~l~~l~~~~~~ 208 (263)
-.++|.+.++++ +.|+.+.-+++.+...++++.+ +|-+.... ..+|+..+ .+|+.+..+.+..+++
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~--~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~vp--- 177 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEE--AGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADVP--- 177 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCCe---
Confidence 457999999999 5699888567777788888877 67764333 55665544 5799988888766554
Q ss_pred EEEEcC---ChhhHHHhhccCcCCCCcEEEEcCCCCC---hHHHHhh
Q 024758 209 LHFVED---RLATLKNVIKEPELDGWNLYLGNLFRFL---CHILLLY 249 (263)
Q Consensus 209 ~l~VGD---s~~Di~aA~~~~~~Agi~~v~v~wGy~~---~~~l~~~ 249 (263)
+++|= +..|+..|.+ .|.+.|.|.+|... +....++
T Consensus 178 -VIveaGI~tpeda~~Ame----lGAdgVlV~SAItka~dP~~ma~a 219 (250)
T PRK00208 178 -VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAVAGDPVAMARA 219 (250)
T ss_pred -EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhhCCCCHHHHHHH
Confidence 77764 4677777776 89999999999987 4544433
No 187
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=92.66 E-value=0.64 Score=41.12 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=74.9
Q ss_pred HHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhC-------CCCCCceEEcCCCCCcHHHH
Q 024758 126 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVL 195 (263)
Q Consensus 126 y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~g-------l~~~f~~v~G~~~~pkp~~l 195 (263)
|.+-|..+-+. ...||.|...++ ..|++++|-|+-+...-+.+.. |-+ ++.|||.-+|.- -....+
T Consensus 111 w~~gy~sg~lk-~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg-~s~~gdl~~y~~gyfDt~iG~K--~e~~sy 186 (254)
T KOG2630|consen 111 WAAGYESGELK-AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFG-YSDAGDLRKYISGYFDTTIGLK--VESQSY 186 (254)
T ss_pred HHhhccccccc-ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHc-ccCcchHHHHhhhhhhccccce--ehhHHH
Confidence 55555544443 479999999999 8999999998877665554444 232 234566555421 345788
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
.++.+.+|.++.+.+|.=|-..-..+|+. +|+.+..+
T Consensus 187 ~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~----aGl~a~l~ 223 (254)
T KOG2630|consen 187 KKIGHLIGKSPREILFLTDVPREAAAARK----AGLQAGLV 223 (254)
T ss_pred HHHHHHhCCChhheEEeccChHHHHHHHh----cccceeee
Confidence 99999999999999999999999999987 77766544
No 188
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=92.56 E-value=0.056 Score=45.86 Aligned_cols=14 Identities=36% Similarity=0.627 Sum_probs=12.3
Q ss_pred EEEEecCcccccCH
Q 024758 4 LYALDFDGVICDSC 17 (263)
Q Consensus 4 ~vlFDlDGTLvDS~ 17 (263)
+++||+||||+++-
T Consensus 1 li~~D~DgTL~~~~ 14 (204)
T TIGR01484 1 LLFFDLDGTLLDPN 14 (204)
T ss_pred CEEEeCcCCCcCCC
Confidence 58999999999875
No 189
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=92.30 E-value=0.067 Score=45.21 Aligned_cols=15 Identities=40% Similarity=0.543 Sum_probs=13.7
Q ss_pred CcEEEEecCcccccC
Q 024758 2 EDLYALDFDGVICDS 16 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (263)
.|+|+||+||||+|+
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 489999999999996
No 190
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.19 E-value=0.095 Score=48.35 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=21.3
Q ss_pred EEEEecCcccccCHHHHHHHHHHHHHHh
Q 024758 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~di~~s~~~~~~~~ 31 (263)
+++||+||||+++..- ...+..+++.+
T Consensus 2 ~~ifD~DGvL~~g~~~-i~ga~eal~~L 28 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKP-IAGASDALRRL 28 (321)
T ss_pred EEEEeCcCceECCccc-cHHHHHHHHHH
Confidence 6899999999999887 55555666666
No 191
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=92.15 E-value=0.077 Score=43.04 Aligned_cols=16 Identities=38% Similarity=0.397 Sum_probs=14.3
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
++++||+||||.++-.
T Consensus 1 ~~~~~d~dgtl~~~~~ 16 (147)
T TIGR01656 1 PALFLDRDGVINEDTV 16 (147)
T ss_pred CeEEEeCCCceeccCC
Confidence 5799999999999875
No 192
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=92.03 E-value=0.29 Score=43.70 Aligned_cols=46 Identities=26% Similarity=0.137 Sum_probs=38.6
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G 185 (263)
..+|++.++|+ ++|++++|+|+++...+..++++ +|+..++-..-|
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~i~~nG 69 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPFIVENG 69 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCEEEEcC
Confidence 56788999998 89999999999999999999996 999766543334
No 193
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=92.00 E-value=0.064 Score=43.84 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.3
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
|+++|||||||+.+..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999999865
No 194
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=91.92 E-value=0.099 Score=47.88 Aligned_cols=30 Identities=10% Similarity=0.093 Sum_probs=20.5
Q ss_pred CcEEEEecCcccccCHHHH---HHHHHHHHHHh
Q 024758 2 EDLYALDFDGVICDSCEET---ALSAVKAARVR 31 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di---~~s~~~~~~~~ 31 (263)
.++|+|||||||++.-..+ -..+..+++++
T Consensus 126 ~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~L 158 (301)
T TIGR01684 126 PHVVVFDLDSTLITDEEPVRIRDPRIYDSLTEL 158 (301)
T ss_pred ceEEEEecCCCCcCCCCccccCCHHHHHHHHHH
Confidence 3799999999999986543 23444444444
No 195
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=91.66 E-value=0.096 Score=43.74 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=14.0
Q ss_pred CcEEEEecCcccccCH
Q 024758 2 EDLYALDFDGVICDSC 17 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (263)
.|+++||+||||+++-
T Consensus 13 ~k~~~~D~Dgtl~~~~ 28 (166)
T TIGR01664 13 SKVAAFDLDGTLITTR 28 (166)
T ss_pred CcEEEEeCCCceEecC
Confidence 4899999999999864
No 196
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=91.52 E-value=0.079 Score=40.48 Aligned_cols=16 Identities=31% Similarity=0.426 Sum_probs=13.7
Q ss_pred EEEEecCcccccCHHH
Q 024758 4 LYALDFDGVICDSCEE 19 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~d 19 (263)
+++||+||||+++-+.
T Consensus 1 ~~vfD~D~tl~~~~~~ 16 (139)
T cd01427 1 AVLFDLDGTLLDSEPG 16 (139)
T ss_pred CeEEccCCceEccCcc
Confidence 4899999999998763
No 197
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=91.35 E-value=0.12 Score=47.46 Aligned_cols=19 Identities=16% Similarity=0.303 Sum_probs=16.1
Q ss_pred CcEEEEecCcccccCHHHH
Q 024758 2 EDLYALDFDGVICDSCEET 20 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di 20 (263)
.++|+||+||||+++-..+
T Consensus 128 ~~~i~~D~D~TL~~~~~~v 146 (303)
T PHA03398 128 PHVIVFDLDSTLITDEEPV 146 (303)
T ss_pred ccEEEEecCCCccCCCCcc
Confidence 4899999999999995544
No 198
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=91.13 E-value=0.38 Score=42.60 Aligned_cols=48 Identities=13% Similarity=0.163 Sum_probs=40.6
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcC---CchHHHHHHHHHhhCCCCCCceEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGL 186 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~Tn---K~~~~a~~iL~~~~gl~~~f~~v~G~ 186 (263)
..++||+.+.|+ ++|++++++|| ++.......|++ +|++...+.|+++
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~-~g~~~~~~~iit~ 69 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS-FDIPATLETVFTA 69 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEeeH
Confidence 467899999998 89999999998 667788888886 9998777778865
No 199
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=90.91 E-value=0.1 Score=42.81 Aligned_cols=14 Identities=50% Similarity=0.805 Sum_probs=12.8
Q ss_pred cEEEEecCcccccC
Q 024758 3 DLYALDFDGVICDS 16 (263)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (263)
|+|+||+||||+|.
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 2 RLLILDVDGVLTDG 15 (154)
T ss_pred eEEEEeCceeEEcC
Confidence 79999999999974
No 200
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=90.82 E-value=0.47 Score=42.04 Aligned_cols=38 Identities=13% Similarity=0.390 Sum_probs=33.4
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCC
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV 176 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl 176 (263)
.++-||+.++++ ++-++-.|+|+.-+..++++.+ +.|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~-~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTAS-MIGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHH-hcCC
Confidence 478999999999 7777889999999999999998 5887
No 201
>PRK10444 UMP phosphatase; Provisional
Probab=90.61 E-value=2.7 Score=37.30 Aligned_cols=48 Identities=21% Similarity=0.275 Sum_probs=36.2
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH--hhCCCCCCceEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE--LAGVTITPDRLYGL 186 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~--~~gl~~~f~~v~G~ 186 (263)
+++||+.+.|+ ++|+++.++||.+....+.+.++ .+|+.--.+.|+++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence 68999999998 88999999999888766555553 15775445666653
No 202
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=89.89 E-value=6.3 Score=34.47 Aligned_cols=71 Identities=23% Similarity=0.359 Sum_probs=44.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~---~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
..+|||+.+.|+ ++|+++.++||.+ .......|.+++|+.--++.|+.+ ...+...+++.+ +...++.
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits-----~~~~~~~l~~~~-~~~~v~v 86 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS-----GSVTKDLLRQRF-EGEKVYV 86 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH-----HHHHHHHHHHhC-CCCEEEE
Confidence 468999999998 7899999999654 443434444346776555666643 223334444322 2345777
Q ss_pred EcC
Q 024758 212 VED 214 (263)
Q Consensus 212 VGD 214 (263)
+|.
T Consensus 87 ~G~ 89 (236)
T TIGR01460 87 IGV 89 (236)
T ss_pred ECC
Confidence 885
No 203
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=89.61 E-value=1.5 Score=46.35 Aligned_cols=90 Identities=10% Similarity=0.189 Sum_probs=64.4
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc--eEE-cCC-CC------------------CcH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-GLG-TG------------------PKV 192 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~--~v~-G~~-~~------------------pkp 192 (263)
-+|-|+++++++ ++|+++.++|.-....|..+-++ .|+..--+ .++ |.+ .. -.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 478899999999 89999999999999999999996 99865432 244 543 10 124
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 193 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 193 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
+-=.++.+.+.-...-+.|+||..||+-|=|+ |.|-
T Consensus 625 ~qK~~IV~~lq~~g~vVamtGDGvNDapALk~----ADVG 660 (917)
T COG0474 625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKA----ADVG 660 (917)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCchhHHHHHh----cCcc
Confidence 32222333333334558899999999999887 7753
No 204
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=89.61 E-value=0.17 Score=41.96 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=12.1
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
|+++||+||||+-+..
T Consensus 1 Kia~fD~DgTLi~~~s 16 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS 16 (159)
T ss_dssp SEEEE-SCTTTEE-ST
T ss_pred CEEEEeCCCCccCCCC
Confidence 6789999999998754
No 205
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=89.25 E-value=0.22 Score=44.71 Aligned_cols=35 Identities=17% Similarity=0.180 Sum_probs=31.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
.|...+.++++.+|+..+++++|||..+|+.+=+.
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~ 208 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAV 208 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHH
Confidence 78899999999999999999999999999887654
No 206
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=89.18 E-value=0.37 Score=42.92 Aligned_cols=46 Identities=26% Similarity=0.381 Sum_probs=35.5
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCCCceEEc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYG 185 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~iL~~~~gl~~~f~~v~G 185 (263)
.++||+.+.|+ ++|++++++||++... ....|+. +|++.-.+.|+.
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~t 72 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFT 72 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEc
Confidence 38999999999 7999999999976664 5566675 888655556665
No 207
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=89.03 E-value=3.9 Score=36.57 Aligned_cols=85 Identities=20% Similarity=0.193 Sum_probs=52.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC--------------C----CCCcHHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL--------------G----TGPKVNVLK 196 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~--------------~----~~pkp~~l~ 196 (263)
..+-+|+.++++ ++++|+.|.|.--...++.+|++ .|....=-.|++. + +..|-+...
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q-~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ-AGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH-TT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH-cCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 467899999998 89999999999999999999997 6653222223321 1 013333222
Q ss_pred H---HHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 197 Q---LQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 197 ~---~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
. -.+++ -...+++..|||..|+.+|.-
T Consensus 168 ~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G 197 (246)
T PF05822_consen 168 EDSPYFKQL-KKRTNVLLLGDSLGDLHMADG 197 (246)
T ss_dssp TTHHHHHCT-TT--EEEEEESSSGGGGTTTT
T ss_pred cCchHHHHh-ccCCcEEEecCccCChHhhcC
Confidence 1 11222 246789999999999999864
No 208
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=88.58 E-value=2.7 Score=45.10 Aligned_cols=39 Identities=15% Similarity=0.326 Sum_probs=34.4
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
-+|-|||.++++ ++|+++.++|+-..+.|..+-.+ .|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 378899999999 89999999999999999999875 7773
No 209
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=88.46 E-value=2.6 Score=45.21 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=36.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
.++-|++.+.++ ++|+++.++|+-....+..+-++ .||-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 478999999999 89999999999999999999996 9994
No 210
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=88.06 E-value=2.2 Score=41.74 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=59.3
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC--------CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHH
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 221 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~--------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~a 221 (263)
++|+-++|+|-+...-++.+..+ + -+.|.-.+. .||.+-++++++++|+..+..+||.|++.-.+-
T Consensus 269 kqGVlLav~SKN~~~da~evF~k-h-----p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~ 342 (574)
T COG3882 269 KQGVLLAVCSKNTEKDAKEVFRK-H-----PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAEREL 342 (574)
T ss_pred hccEEEEEecCCchhhHHHHHhh-C-----CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHH
Confidence 89999999999999999888875 2 345665431 299999999999999999999999999999999
Q ss_pred hhc
Q 024758 222 VIK 224 (263)
Q Consensus 222 A~~ 224 (263)
-|+
T Consensus 343 vk~ 345 (574)
T COG3882 343 VKR 345 (574)
T ss_pred HHh
Confidence 987
No 211
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=87.97 E-value=0.29 Score=41.27 Aligned_cols=17 Identities=18% Similarity=0.215 Sum_probs=12.0
Q ss_pred CcEEEEecCcccccCHH
Q 024758 2 EDLYALDFDGVICDSCE 18 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~ 18 (263)
+|+|+||||+||-+---
T Consensus 3 PklvvFDLD~TlW~~~~ 19 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWM 19 (169)
T ss_dssp -SEEEE-STTTSSSS-T
T ss_pred CcEEEEcCcCCCCchhH
Confidence 58999999999976433
No 212
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=87.97 E-value=3 Score=35.95 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=58.6
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCC----CceEEcCC---------CC---CcHHHHHHHHhhCC
Q 024758 142 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTIT----PDRLYGLG---------TG---PKVNVLKQLQKKPE 203 (263)
Q Consensus 142 pGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~----f~~v~G~~---------~~---pkp~~l~~~l~~l~ 203 (263)
||+.+.|+ .+.+.++|-|+.....++.+++. +|+... +..+.... .+ -|+ +..+-++++
T Consensus 48 P~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd--L~~lw~~l~ 124 (195)
T TIGR02245 48 PYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP--LGVIWALLP 124 (195)
T ss_pred CCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEee--cHHhhhhcc
Confidence 99999999 78999999999999999999995 876321 11222211 11 122 222223444
Q ss_pred --CCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 204 --HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 204 --~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.+..++|+|.|++.-...-=. +|+.+- .|-
T Consensus 125 ~~~~~~ntiiVDd~p~~~~~~P~----N~i~I~--~f~ 156 (195)
T TIGR02245 125 EFYSMKNTIMFDDLRRNFLMNPQ----NGLKIR--PFK 156 (195)
T ss_pred cCCCcccEEEEeCCHHHHhcCCC----CccccC--Ccc
Confidence 267899999999887653222 577764 554
No 213
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=87.87 E-value=0.26 Score=43.45 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=21.4
Q ss_pred HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHH
Q 024758 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQL 198 (263)
Q Consensus 164 ~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~ 198 (263)
..++.++++ +++..-.-..+| |+..+.+++..+
T Consensus 170 ~a~~~~~~~-~~~~~~~~i~iG-D~~~D~~~~~~~ 202 (244)
T TIGR00685 170 EIVKRLLWH-QPGSGISPVYLG-DDITDEDAFRVV 202 (244)
T ss_pred HHHHHHHHh-cccCCCceEEEc-CCCcHHHHHHHH
Confidence 667788885 887654444445 444677777765
No 214
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=86.33 E-value=0.34 Score=40.73 Aligned_cols=49 Identities=16% Similarity=0.111 Sum_probs=27.7
Q ss_pred HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHh
Q 024758 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 222 (263)
Q Consensus 164 ~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA 222 (263)
...+.++++ +|+..--...+|.. ..+-+ +++..|++ +.++++..++..+
T Consensus 85 ~~~~~~~~~-l~~~~~ev~~iGD~-~nDi~----~~~~ag~~----~am~nA~~~lk~~ 133 (169)
T TIGR02726 85 EPYAQMLEE-MNISDAEVCYVGDD-LVDLS----MMKRVGLA----VAVGDAVADVKEA 133 (169)
T ss_pred HHHHHHHHH-cCcCHHHEEEECCC-HHHHH----HHHHCCCe----EECcCchHHHHHh
Confidence 456677775 88764323344533 23323 34445655 7788888877654
No 215
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=86.17 E-value=1.9 Score=42.46 Aligned_cols=78 Identities=13% Similarity=0.168 Sum_probs=59.3
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 215 (263)
...||++|-.. +-|++...+|.-.+-.+..+-++ -|+++|... .+||-=.+++++.+....=+-|.||.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiAe-------atPEdK~~~I~~eQ~~grlVAMtGDG 518 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIAE-------ATPEDKLALIRQEQAEGRLVAMTGDG 518 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhhc-------CChHHHHHHHHHHHhcCcEEEEcCCC
Confidence 35799999887 89999999999999999999996 999876532 34554444455555455557899999
Q ss_pred hhhHHHhhc
Q 024758 216 LATLKNVIK 224 (263)
Q Consensus 216 ~~Di~aA~~ 224 (263)
.||.-+-.+
T Consensus 519 TNDAPALAq 527 (681)
T COG2216 519 TNDAPALAQ 527 (681)
T ss_pred CCcchhhhh
Confidence 999866543
No 216
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=85.12 E-value=0.47 Score=36.24 Aligned_cols=19 Identities=26% Similarity=0.525 Sum_probs=13.7
Q ss_pred EEEecCcccccCHHHHHHH
Q 024758 5 YALDFDGVICDSCEETALS 23 (263)
Q Consensus 5 vlFDlDGTLvDS~~di~~s 23 (263)
++||+||||.+.-..|-.|
T Consensus 1 ~l~D~dGvl~~g~~~ipga 19 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGA 19 (101)
T ss_dssp EEEESTTTSEETTEE-TTH
T ss_pred CEEeCccEeEeCCCcCcCH
Confidence 6899999999865544433
No 217
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=85.12 E-value=0.52 Score=38.31 Aligned_cols=16 Identities=25% Similarity=0.401 Sum_probs=14.3
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
..+++||||||++|..
T Consensus 3 ~~lvldld~tl~~~~~ 18 (148)
T smart00577 3 KTLVLDLDETLVHSTH 18 (148)
T ss_pred cEEEEeCCCCeECCCC
Confidence 5799999999999865
No 218
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=85.10 E-value=2.5 Score=37.89 Aligned_cols=46 Identities=9% Similarity=-0.042 Sum_probs=25.9
Q ss_pred HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024758 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (263)
Q Consensus 164 ~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 215 (263)
..++.++++ +|+..-.-..+| |...+-+++..+- +++ .-.+-||.+
T Consensus 177 ~al~~ll~~-~~~~~~~v~~~G-D~~nD~~mf~~~~-~~~---g~~vavg~a 222 (266)
T PRK10187 177 EAIAAFMQE-APFAGRTPVFVG-DDLTDEAGFAVVN-RLG---GISVKVGTG 222 (266)
T ss_pred HHHHHHHHh-cCCCCCeEEEEc-CCccHHHHHHHHH-hcC---CeEEEECCC
Confidence 456778884 888644333344 4445666776653 222 234677755
No 219
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=84.74 E-value=15 Score=34.25 Aligned_cols=121 Identities=16% Similarity=0.144 Sum_probs=84.6
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhcccc------CCCCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCC-
Q 024758 111 NREALIELSGKVRDEWMDTDFTTWIG------ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVT- 177 (263)
Q Consensus 111 ~~~~~~~~~~~~r~~y~~~~~~~~~~------~~~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~- 177 (263)
+.+++-....-.|+.+ ..+|.+ .-.++|.+.++++ +.|+.+.++++.+...++++.+ +|-.
T Consensus 148 ta~eAv~~a~lare~~----~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~--~g~~a 221 (326)
T PRK11840 148 TAEEAVRTLRLAREAG----GWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED--AGAVA 221 (326)
T ss_pred CHHHHHHHHHHHHHhc----CCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh--cCCEE
Confidence 4444444445455543 234432 2458999999999 5799998888888888888877 5652
Q ss_pred -CCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC---ChhhHHHhhccCcCCCCcEEEEcCCCCChHH
Q 024758 178 -ITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED---RLATLKNVIKEPELDGWNLYLGNLFRFLCHI 245 (263)
Q Consensus 178 -~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD---s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~ 245 (263)
......+|+..+ .+|+.+..+.+...++ ++||= +..|+..|-+ .|.+-++++-|--....
T Consensus 222 vmPl~~pIGsg~gv~~p~~i~~~~e~~~vp----VivdAGIg~~sda~~Ame----lGadgVL~nSaIa~a~d 286 (326)
T PRK11840 222 VMPLGAPIGSGLGIQNPYTIRLIVEGATVP----VLVDAGVGTASDAAVAME----LGCDGVLMNTAIAEAKN 286 (326)
T ss_pred EeeccccccCCCCCCCHHHHHHHHHcCCCc----EEEeCCCCCHHHHHHHHH----cCCCEEEEcceeccCCC
Confidence 122445565544 7999999999986665 77774 4678888877 89999999998754433
No 220
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=84.17 E-value=2.7 Score=37.84 Aligned_cols=78 Identities=21% Similarity=0.083 Sum_probs=52.4
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEE--cCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCc
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY--GLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~--G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 227 (263)
..-++++|||..+...-+++++.+..|.-..|..+ |+- +|..++.. ++ |. ||+.|....++.|.
T Consensus 184 ~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLgG~--~K~~vL~~----~~--ph--IFFDDQ~~H~~~a~---- 249 (264)
T PF06189_consen 184 NSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLGGL--PKGPVLKA----FR--PH--IFFDDQDGHLESAS---- 249 (264)
T ss_pred CCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhCCC--chhHHHHh----hC--CC--EeecCchhhhhHhh----
Confidence 35589999998776666666654333443444333 222 45554433 22 33 99999999999997
Q ss_pred CCCCcEEEEcCCCCC
Q 024758 228 LDGWNLYLGNLFRFL 242 (263)
Q Consensus 228 ~Agi~~v~v~wGy~~ 242 (263)
.+++++-|.||-.+
T Consensus 250 -~~vps~hVP~gv~n 263 (264)
T PF06189_consen 250 -KVVPSGHVPYGVAN 263 (264)
T ss_pred -cCCCEEeccCCcCC
Confidence 59999999999654
No 221
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=83.76 E-value=4.2 Score=42.25 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=69.2
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc----eEE-cCC--C-----------------CCc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----RLY-GLG--T-----------------GPK 191 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~----~v~-G~~--~-----------------~pk 191 (263)
+|-|+|.+.++ +.|+++-++|.-....|+.|-++ .|+...-+ ..+ |++ . +-.
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 67899999998 99999999999999999999996 99865544 222 222 0 012
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 192 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
|..=.++.+.|+...+=+-|-||..||.-+-|. |.| |+.-|-..-+
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~----AdI---GIAMG~~GTd 708 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKK----ADI---GIAMGISGTD 708 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhh----ccc---ceeecCCccH
Confidence 433334444444455557899999999999887 664 6666744333
No 222
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=82.92 E-value=14 Score=33.17 Aligned_cols=81 Identities=11% Similarity=0.131 Sum_probs=59.8
Q ss_pred CcEEEEcCCchHHHHHHHHHhhCCCCCC--ceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCC
Q 024758 153 SRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 153 ~~laI~TnK~~~~a~~iL~~~~gl~~~f--~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
+.+.|-|+.--+.+-+.|= +||+.+| +-|+++....|...++.+.+++|-+...-+.|||..---++|+. -+
T Consensus 177 vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~----l~ 250 (274)
T TIGR01658 177 INVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQA----MN 250 (274)
T ss_pred eEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHh----cC
Confidence 4444444444455555553 6777665 55666544489999999999999988999999999999899987 89
Q ss_pred CcEEEEcCC
Q 024758 231 WNLYLGNLF 239 (263)
Q Consensus 231 i~~v~v~wG 239 (263)
++++=+.-.
T Consensus 251 wPFw~I~~h 259 (274)
T TIGR01658 251 WPFVKIDLH 259 (274)
T ss_pred CCeEEeecC
Confidence 999877544
No 223
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=82.90 E-value=0.65 Score=40.03 Aligned_cols=15 Identities=33% Similarity=0.430 Sum_probs=13.5
Q ss_pred cEEEEecCcccccCH
Q 024758 3 DLYALDFDGVICDSC 17 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (263)
+++++||||||+|+.
T Consensus 22 klLVLDLDeTLvh~~ 36 (195)
T TIGR02245 22 KLLVLDIDYTLFDHR 36 (195)
T ss_pred cEEEEeCCCceEccc
Confidence 799999999999864
No 224
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=82.75 E-value=18 Score=32.59 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=75.6
Q ss_pred CCCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCC--CCceEEcCCCC-CcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~~--~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~ 208 (263)
-.++|...|+|+ +.|+.+.--||-+...++++.+ .|-.- ..-.-+|+..+ .+|..+..+++...++
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLed--~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~vp--- 191 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLED--IGCATVMPLGSPIGSGQGLQNLLNLQIIIENAKIP--- 191 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--cCCeEEeeccCcccCCCCCCCHHHHHHHHHcCCCc---
Confidence 468999999999 8999999999999999999887 56531 12223454455 7899999999887776
Q ss_pred EEEEcC---ChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 209 LHFVED---RLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 209 ~l~VGD---s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
++||= +..|+..|-+ .|.+-|+++-|--...
T Consensus 192 -VivdAGIgt~sDa~~AmE----lGaDgVL~nSaIakA~ 225 (267)
T CHL00162 192 -VIIDAGIGTPSEASQAME----LGASGVLLNTAVAQAK 225 (267)
T ss_pred -EEEeCCcCCHHHHHHHHH----cCCCEEeecceeecCC
Confidence 77764 5678888877 8999999999875433
No 225
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=82.61 E-value=4.9 Score=36.68 Aligned_cols=81 Identities=17% Similarity=0.108 Sum_probs=62.6
Q ss_pred EEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 155 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 155 laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
++-+|.+.++.++.+... ..+ -.|+|+..-.+..-+.++.++.|. .++.| |+..||.... ..|+.+|
T Consensus 195 ICyAT~nRQ~Avk~la~~-~Dl----~iVVG~~nSSNs~rL~eiA~~~g~---~aylI-d~~~ei~~~w----~~~~~~V 261 (294)
T COG0761 195 ICYATQNRQDAVKELAPE-VDL----VIVVGSKNSSNSNRLAEIAKRHGK---PAYLI-DDAEEIDPEW----LKGVKTV 261 (294)
T ss_pred cchhhhhHHHHHHHHhhc-CCE----EEEECCCCCccHHHHHHHHHHhCC---CeEEe-CChHhCCHHH----hcCccEE
Confidence 788899999988888774 332 357786544667778888888887 34777 6678887664 5899999
Q ss_pred EEcCCCCChHHHHh
Q 024758 235 LGNLFRFLCHILLL 248 (263)
Q Consensus 235 ~v~wGy~~~~~l~~ 248 (263)
|||=|-..++.+.+
T Consensus 262 GvTAGAStPd~lV~ 275 (294)
T COG0761 262 GVTAGASTPDWLVQ 275 (294)
T ss_pred EEecCCCCCHHHHH
Confidence 99999999999864
No 226
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=82.50 E-value=0.68 Score=38.58 Aligned_cols=13 Identities=38% Similarity=0.296 Sum_probs=11.7
Q ss_pred cEEEEecCccccc
Q 024758 3 DLYALDFDGVICD 15 (263)
Q Consensus 3 ~~vlFDlDGTLvD 15 (263)
|+++||+||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 6899999999985
No 227
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=82.26 E-value=2.6 Score=36.01 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=31.0
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
.|-..++|+ ++|++++|+|+++...++.+++. +|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 344677777 89999999999999999999995 9986
No 228
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=82.19 E-value=2.7 Score=36.65 Aligned_cols=40 Identities=23% Similarity=0.053 Sum_probs=34.5
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~ 179 (263)
...|+..+.|+ ++|+++.++|+++...+..++++ +|+..+
T Consensus 15 ~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~~ 57 (225)
T TIGR02461 15 YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEPP 57 (225)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCc
Confidence 45678889988 78999999999999999999996 998643
No 229
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=82.03 E-value=0.75 Score=38.40 Aligned_cols=17 Identities=41% Similarity=0.528 Sum_probs=14.9
Q ss_pred CCcEEEEecCcccccCH
Q 024758 1 MEDLYALDFDGVICDSC 17 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~ 17 (263)
|.|+++||.||||.|..
T Consensus 7 ~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 7 NIKLLILDVDGVLTDGK 23 (170)
T ss_pred hceEEEEeccceeecCe
Confidence 45899999999999974
No 230
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=81.99 E-value=2.9 Score=39.84 Aligned_cols=84 Identities=13% Similarity=0.137 Sum_probs=62.0
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhC--CCCCCceEEcCCCC----------------------------------CcHH
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG----------------------------------PKVN 193 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~g--l~~~f~~v~G~~~~----------------------------------pkp~ 193 (263)
+.|.++.++||-.-.++..++++++| |..||+.|+-...+ +.+-
T Consensus 212 ~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~~ySgg 291 (424)
T KOG2469|consen 212 DSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGGVYSGG 291 (424)
T ss_pred hhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcccCCcc
Confidence 89999999999999999999997665 77889888753100 1224
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChh-hHHHhhccCcCCCCcEEEE
Q 024758 194 VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 194 ~l~~~l~~l~~~~~~~l~VGDs~~-Di~aA~~~~~~Agi~~v~v 236 (263)
....+++.+++...+++||||... ||..-++ .-|.+++.|
T Consensus 292 s~~~~~~~l~~~g~diLy~gdHi~~dvl~skk---~~~wrt~lv 332 (424)
T KOG2469|consen 292 SLKTVETSMKVKGKDILYGGDHIWGDVLVSKK---RRGWRTVLV 332 (424)
T ss_pred hHHHHHHHhcccccceeecccceeeeEEecce---ecceEEEEE
Confidence 555666667777789999999874 6655553 367777766
No 231
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=80.37 E-value=2.9 Score=38.41 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=34.5
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~ 179 (263)
..++-+.+.|+ ++|++++++|+|....+..+.+. +|+..+
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl~~p 60 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQ-LRLEHP 60 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCCCCe
Confidence 45677888887 89999999999999999999996 998753
No 232
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=79.85 E-value=1.7 Score=45.62 Aligned_cols=35 Identities=14% Similarity=-0.089 Sum_probs=29.2
Q ss_pred CcHHHHHHHHh---hCCCCCCcEEEEcCChhhHHHhhc
Q 024758 190 PKVNVLKQLQK---KPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 190 pkp~~l~~~l~---~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
.|...+..+++ .+|.+++.+++|||..+|..+=+.
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~ 799 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEV 799 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHH
Confidence 68888888764 468899999999999999887664
No 233
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=79.84 E-value=1.5 Score=44.94 Aligned_cols=33 Identities=9% Similarity=-0.072 Sum_probs=29.6
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
.|...+..+++ +.+++.++++||+.+|..+-+.
T Consensus 657 nKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~ 689 (726)
T PRK14501 657 NKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRA 689 (726)
T ss_pred CHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHh
Confidence 78889999888 7788999999999999999875
No 234
>PLN03017 trehalose-phosphatase
Probab=79.79 E-value=1.1 Score=42.36 Aligned_cols=34 Identities=12% Similarity=0.027 Sum_probs=26.8
Q ss_pred CcHHHHHHHHhhCCCCC---CcEEEEcCChhhHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQG---LRLHFVEDRLATLKNVI 223 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~---~~~l~VGDs~~Di~aA~ 223 (263)
.|-..+..+++.++... .-.+||||-.+|-.+=+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~ 319 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFK 319 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHH
Confidence 67889999999987653 35799999999966644
No 235
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=79.34 E-value=1 Score=40.68 Aligned_cols=84 Identities=15% Similarity=0.067 Sum_probs=48.7
Q ss_pred CCCcccHHHHHHhCCCcEEEEcCC--chHHHHHHHHH-hhCCCCC-CceEEcCC------CC-CcHHHHHHHHhhCCCCC
Q 024758 138 NRLYPGVSDALKLASSRIYIVTSN--QSRFVETLLRE-LAGVTIT-PDRLYGLG------TG-PKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 138 ~~lypGv~e~L~~~g~~laI~TnK--~~~~a~~iL~~-~~gl~~~-f~~v~G~~------~~-pkp~~l~~~l~~l~~~~ 206 (263)
+..+||+. ++.+|+-+++-+-+ ++......+.. ...+... .....|.. .+ .|...+..+++++....
T Consensus 121 v~r~pGs~--iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~ 198 (266)
T COG1877 121 VERTPGSY--IERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDG 198 (266)
T ss_pred hhcCCCeE--EEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCC
Confidence 35567753 33677777777632 22222222221 1333333 33344544 12 68888999998887766
Q ss_pred CcEEEEcCChhhHHHhh
Q 024758 207 LRLHFVEDRLATLKNVI 223 (263)
Q Consensus 207 ~~~l~VGDs~~Di~aA~ 223 (263)
.-.++.||-.+|=.+=+
T Consensus 199 ~~~~~aGDD~TDE~~F~ 215 (266)
T COG1877 199 RFPIFAGDDLTDEDAFA 215 (266)
T ss_pred CcceecCCCCccHHHHH
Confidence 66899999999865433
No 236
>PLN02151 trehalose-phosphatase
Probab=78.95 E-value=1.2 Score=41.92 Aligned_cols=34 Identities=12% Similarity=-0.020 Sum_probs=26.3
Q ss_pred CcHHHHHHHHhhCCCCCC---cEEEEcCChhhHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGL---RLHFVEDRLATLKNVI 223 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~---~~l~VGDs~~Di~aA~ 223 (263)
.|-..+..++++++.... -.+||||-.+|-.+=+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~ 305 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFK 305 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHH
Confidence 578899999998875532 2799999999966643
No 237
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=78.42 E-value=2.7 Score=39.52 Aligned_cols=69 Identities=20% Similarity=0.291 Sum_probs=48.1
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhC--CCCCCceEEcCCCCC-------cH---------------------------H
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTGP-------KV---------------------------N 193 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~g--l~~~f~~v~G~~~~p-------kp---------------------------~ 193 (263)
++|.++.++||.|-.|+..-+....| |.++||.|+-.-.+| +| -
T Consensus 254 ~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~klekgkiYy~G 333 (510)
T KOG2470|consen 254 DHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVDKLEKGKIYYQG 333 (510)
T ss_pred HhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhhhcccCceeeec
Confidence 89999999999999999887773223 568999998632111 11 1
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhh
Q 024758 194 VLKQLQKKPEHQGLRLHFVEDRLAT 218 (263)
Q Consensus 194 ~l~~~l~~l~~~~~~~l~VGDs~~D 218 (263)
.+...++--|....+++|+||.++-
T Consensus 334 ~l~~flelt~WrG~~VlYFGDHlyS 358 (510)
T KOG2470|consen 334 NLKSFLELTGWRGPRVLYFGDHLYS 358 (510)
T ss_pred cHHHHHHHhccCCCeeEEecCcchh
Confidence 2334444446667789999999753
No 238
>PTZ00174 phosphomannomutase; Provisional
Probab=77.87 E-value=4 Score=35.91 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=23.5
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHh
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~ 31 (263)
|+|+|||||||+|+-..|......+++++
T Consensus 6 klia~DlDGTLL~~~~~is~~~~~ai~~l 34 (247)
T PTZ00174 6 TILLFDVDGTLTKPRNPITQEMKDTLAKL 34 (247)
T ss_pred eEEEEECcCCCcCCCCCCCHHHHHHHHHH
Confidence 89999999999999876766666666665
No 239
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=77.82 E-value=1.4 Score=36.62 Aligned_cols=16 Identities=19% Similarity=0.368 Sum_probs=13.8
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
++++||.||||.++.+
T Consensus 2 ~~~~~d~dg~l~~~~~ 17 (161)
T TIGR01261 2 KILFIDRDGTLIEEPP 17 (161)
T ss_pred CEEEEeCCCCccccCC
Confidence 6899999999988654
No 240
>PLN03190 aminophospholipid translocase; Provisional
Probab=77.29 E-value=16 Score=39.88 Aligned_cols=34 Identities=18% Similarity=0.408 Sum_probs=28.7
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLR 171 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~ 171 (263)
.+|-||+.++++ ++|+++.++|+-....+..+-.
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 378899999999 7899999999977777776654
No 241
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=77.06 E-value=1.4 Score=43.73 Aligned_cols=15 Identities=27% Similarity=0.527 Sum_probs=13.5
Q ss_pred cEEEEecCcccccCH
Q 024758 3 DLYALDFDGVICDSC 17 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (263)
|+++||+||||+.+.
T Consensus 169 Kia~fD~DGTLi~t~ 183 (526)
T TIGR01663 169 KIAGFDLDGTIIKTK 183 (526)
T ss_pred cEEEEECCCCccccC
Confidence 799999999999864
No 242
>COG4996 Predicted phosphatase [General function prediction only]
Probab=75.52 E-value=1.5 Score=35.67 Aligned_cols=16 Identities=19% Similarity=0.247 Sum_probs=13.4
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
++|+||+||||-|-..
T Consensus 1 ~~i~~d~d~t~wdhh~ 16 (164)
T COG4996 1 RAIVFDADKTLWDHHN 16 (164)
T ss_pred CcEEEeCCCccccccc
Confidence 4799999999999643
No 243
>PLN02580 trehalose-phosphatase
Probab=75.00 E-value=1.6 Score=41.58 Aligned_cols=35 Identities=9% Similarity=-0.024 Sum_probs=29.3
Q ss_pred CcHHHHHHHHhhCCCCCCc---EEEEcCChhhHHHhhc
Q 024758 190 PKVNVLKQLQKKPEHQGLR---LHFVEDRLATLKNVIK 224 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~---~l~VGDs~~Di~aA~~ 224 (263)
.|-..+..+++.++.+..+ .+||||..+|..+=+.
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~ 338 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKV 338 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHh
Confidence 6788999999999987653 3899999999988763
No 244
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=73.57 E-value=9.2 Score=33.62 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=34.6
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEE
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 184 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~ 184 (263)
+=|...+.|+ ++|++++|+|+.+...+..++++ +|+..+.+.++
T Consensus 21 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~~~~I 67 (270)
T PRK10513 21 ISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKE-LHMEQPGDYCI 67 (270)
T ss_pred cCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHH-hCCCCCCCeEE
Confidence 4466677777 89999999999999999999996 88864333333
No 245
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=73.37 E-value=2.1 Score=35.44 Aligned_cols=15 Identities=27% Similarity=0.419 Sum_probs=13.4
Q ss_pred cEEEEecCcccccCH
Q 024758 3 DLYALDFDGVICDSC 17 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (263)
+.+++|||+|||-|-
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 579999999999983
No 246
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=73.20 E-value=6.2 Score=33.62 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=34.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~ 179 (263)
++-|...+.|+ ++|++++|+|+.+...++.+++. +++..+
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~-l~~~~~ 60 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVL-IGTSGP 60 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHH-hCCCCc
Confidence 46688888888 89999999999999999999996 887643
No 247
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=73.11 E-value=2.5 Score=36.86 Aligned_cols=45 Identities=11% Similarity=0.083 Sum_probs=28.3
Q ss_pred CceEEcCC------CC-CcHHHHHHHHhhCCCC---CCcEEEEcCChhhHHHhhc
Q 024758 180 PDRLYGLG------TG-PKVNVLKQLQKKPEHQ---GLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 180 f~~v~G~~------~~-pkp~~l~~~l~~l~~~---~~~~l~VGDs~~Di~aA~~ 224 (263)
+..+.|.. .+ .|-..+..++++++.. +.-++|+||..+|-.+=+.
T Consensus 148 ~~v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~ 202 (235)
T PF02358_consen 148 LEVVPGKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRA 202 (235)
T ss_dssp -EEEE-SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHT
T ss_pred EEEEECCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHH
Confidence 45566654 12 5889999999998765 7789999999999776554
No 248
>PRK06769 hypothetical protein; Validated
Probab=72.76 E-value=2.2 Score=35.53 Aligned_cols=12 Identities=33% Similarity=0.398 Sum_probs=11.2
Q ss_pred cEEEEecCcccc
Q 024758 3 DLYALDFDGVIC 14 (263)
Q Consensus 3 ~~vlFDlDGTLv 14 (263)
++++||.||||.
T Consensus 5 ~~~~~d~d~~~~ 16 (173)
T PRK06769 5 QAIFIDRDGTIG 16 (173)
T ss_pred cEEEEeCCCccc
Confidence 899999999994
No 249
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=72.46 E-value=2 Score=40.80 Aligned_cols=19 Identities=21% Similarity=0.522 Sum_probs=16.3
Q ss_pred cEEEEecCcccccCHHHHH
Q 024758 3 DLYALDFDGVICDSCEETA 21 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~ 21 (263)
|.+.||+||||+|+....+
T Consensus 76 K~i~FD~dgtlI~t~sg~v 94 (422)
T KOG2134|consen 76 KIIMFDYDGTLIDTKSGKV 94 (422)
T ss_pred ceEEEecCCceeecCCcce
Confidence 7899999999999987443
No 250
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=70.88 E-value=8 Score=33.04 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=33.1
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~ 179 (263)
+-|...+.|+ ++|++++|+|+++...+..+++. +|+..+
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKL-IGTSGP 62 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCc
Confidence 4467777777 79999999999999999999996 998754
No 251
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=70.13 E-value=2.5 Score=37.34 Aligned_cols=112 Identities=13% Similarity=0.048 Sum_probs=53.3
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhccccC-CCCcccHHHHH---H-hCCCcEEEEcCCchH-H--HHHHHHHhhCCC---
Q 024758 109 SENREALIELSGKVRDEWMDTDFTTWIGA-NRLYPGVSDAL---K-LASSRIYIVTSNQSR-F--VETLLRELAGVT--- 177 (263)
Q Consensus 109 ~~~~~~~~~~~~~~r~~y~~~~~~~~~~~-~~lypGv~e~L---~-~~g~~laI~TnK~~~-~--a~~iL~~~~gl~--- 177 (263)
|+.-+.+++..+..-+.|.-.+.++.... ...+-|...-+ . .+.+-..|..-.... . -...|.. .|+.
T Consensus 100 g~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~d~~~~~~~~~L~e-~glt~v~ 178 (274)
T COG3769 100 GKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSSDERMAQFTARLNE-RGLTFVH 178 (274)
T ss_pred hhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeecccchHHHHHHHHHHh-cCceEEe
Confidence 33444455555555555443322221111 12344444333 2 344444444433322 1 2334443 5663
Q ss_pred -CCCceEEcCCC-C-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHh
Q 024758 178 -ITPDRLYGLGT-G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 222 (263)
Q Consensus 178 -~~f~~v~G~~~-~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA 222 (263)
..|-.|.+... | .....+++.-++++... -++-+||+.||+-.-
T Consensus 179 garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r-~t~~~GDg~nD~Pl~ 225 (274)
T COG3769 179 GARFWHVLDASAGKGQAANWLLETYRRLGGAR-TTLGLGDGPNDAPLL 225 (274)
T ss_pred ccceEEEeccccCccHHHHHHHHHHHhcCcee-EEEecCCCCCcccHH
Confidence 34455555443 2 33455656555555443 478899999997554
No 252
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=69.40 E-value=6.4 Score=33.34 Aligned_cols=38 Identities=26% Similarity=0.441 Sum_probs=33.8
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
.+-|...+.|+ ++|++++|+|+++...+..+++. +++.
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~-~~~~ 55 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKE-LGID 55 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHH-TTHC
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCccccccccccc-ccch
Confidence 45588888888 79999999999999999999996 8886
No 253
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=69.28 E-value=20 Score=33.48 Aligned_cols=81 Identities=17% Similarity=0.249 Sum_probs=53.4
Q ss_pred CCCCcccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhhCC-------------CCCCceEEcCCCCCcHHHHHHHH
Q 024758 137 ANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGV-------------TITPDRLYGLGTGPKVNVLKQLQ 199 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g-~~laI~TnK~~~~a~~iL~~~~gl-------------~~~f~~v~G~~~~pkp~~l~~~l 199 (263)
...++|||..+.+ +.| .++.-+||.+-.+-..+ ++.++- ...++.++++....|-..++.++
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L-~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil 272 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTL-QEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNIL 272 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHH-HHHHhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHH
Confidence 3579999999998 555 89999999987654332 222221 22355565544446777788788
Q ss_pred hhCCCCCCcEEEEcCC-hhhHH
Q 024758 200 KKPEHQGLRLHFVEDR-LATLK 220 (263)
Q Consensus 200 ~~l~~~~~~~l~VGDs-~~Di~ 220 (263)
+++ +..+.+.|||| .+|.+
T Consensus 273 ~~~--p~~kfvLVGDsGE~Dpe 292 (373)
T COG4850 273 RRY--PDRKFVLVGDSGEHDPE 292 (373)
T ss_pred HhC--CCceEEEecCCCCcCHH
Confidence 765 34567999997 45544
No 254
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=68.36 E-value=8.1 Score=33.78 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=28.7
Q ss_pred cHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 024758 143 GVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (263)
Q Consensus 143 Gv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~ 178 (263)
...+.|+ ++|++++|+|+.+...+..++++ +|+..
T Consensus 20 ~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~~~ 57 (256)
T TIGR00099 20 STKEALAKLREKGIKVVLATGRPYKEVKNILKE-LGLDT 57 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 3445555 78999999999999999999996 88864
No 255
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=67.81 E-value=5.9 Score=33.32 Aligned_cols=13 Identities=15% Similarity=0.171 Sum_probs=11.9
Q ss_pred CcEEEEecCcccc
Q 024758 2 EDLYALDFDGVIC 14 (263)
Q Consensus 2 ~~~vlFDlDGTLv 14 (263)
.|+++||+|.||+
T Consensus 41 ik~li~DkDNTL~ 53 (168)
T PF09419_consen 41 IKALIFDKDNTLT 53 (168)
T ss_pred ceEEEEcCCCCCC
Confidence 3899999999998
No 256
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=67.68 E-value=11 Score=32.97 Aligned_cols=38 Identities=21% Similarity=0.153 Sum_probs=32.1
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~ 178 (263)
..+...+.|+ ++|++++|+|+++...+..++++ +|+..
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~-~~~~~ 57 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKE-LGLED 57 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCC
Confidence 4455777777 78999999999999999999996 88753
No 257
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=67.58 E-value=10 Score=33.47 Aligned_cols=40 Identities=10% Similarity=0.028 Sum_probs=34.4
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~ 179 (263)
.+-|...+.|+ ++|++++|+|+.+...++.++++ +|+..+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGA-LSLDAY 61 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCc
Confidence 46677788887 89999999999999999999996 988654
No 258
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=65.81 E-value=12 Score=32.81 Aligned_cols=40 Identities=18% Similarity=0.278 Sum_probs=33.6
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~ 179 (263)
.+-|...+.|+ ++|++++|+|+.+...+..++++ +++..+
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQA-LALDTP 62 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCC
Confidence 45666777777 89999999999999999999996 888643
No 259
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=65.04 E-value=8.1 Score=39.12 Aligned_cols=52 Identities=17% Similarity=0.133 Sum_probs=43.0
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCC-CCC-ceEEcCCCC
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGTG 189 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~-~~f-~~v~G~~~~ 189 (263)
++++=|++.++|+ .+=+.|.|.|--.+..|..+++ .+.-. .|| +.|++.+..
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~-liDP~~~lF~dRIisrde~ 254 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAK-LIDPEGKYFGDRIISRDES 254 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHH-HhCCCCccccceEEEecCC
Confidence 4688899999999 7789999999999999999999 55543 344 888887643
No 260
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=64.90 E-value=15 Score=33.56 Aligned_cols=46 Identities=17% Similarity=0.105 Sum_probs=41.0
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 186 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~ 186 (263)
+-|.|.+.|. +.|.-+.+=|.-.++-+...|++ ++|..+||.|+++
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~-~~L~~~Fd~ii~~ 191 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE-LKLEGYFDIIICG 191 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH-hCCccccEEEEeC
Confidence 4488888887 88999999999999999999996 9999999999964
No 261
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=64.09 E-value=13 Score=32.42 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=31.7
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEc
Q 024758 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (263)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G 185 (263)
|...++++ ++|++++++|+++...++++++. +++.. .+.+++
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~-~~~~~-p~~~I~ 68 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQ-KPLLT-PDIWVT 68 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhc-CCCCC-CCEEEE
Confidence 44445554 78999999999999999999996 88754 444554
No 262
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=64.06 E-value=9.9 Score=34.96 Aligned_cols=39 Identities=26% Similarity=0.546 Sum_probs=33.3
Q ss_pred ccccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH
Q 024758 133 TWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE 172 (263)
Q Consensus 133 ~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~ 172 (263)
-|. ...+.||+.|+|. +.|.++.++||++..+-+..+++
T Consensus 33 lW~-g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK 74 (306)
T KOG2882|consen 33 LWL-GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKK 74 (306)
T ss_pred eee-cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHH
Confidence 355 4689999999999 89999999999998888887774
No 263
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=63.78 E-value=15 Score=31.73 Aligned_cols=34 Identities=15% Similarity=0.101 Sum_probs=28.8
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEc
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G 185 (263)
++|++++|+|+++...++.+++. +++.. .+.++|
T Consensus 28 ~~gi~~viaTGR~~~~v~~~~~~-l~l~~-~~~~I~ 61 (236)
T TIGR02471 28 GDAVGFGIATGRSVESAKSRYAK-LNLPS-PDVLIA 61 (236)
T ss_pred CCCceEEEEeCCCHHHHHHHHHh-CCCCC-CCEEEE
Confidence 78999999999999999999996 88863 456665
No 264
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=63.39 E-value=13 Score=31.52 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=32.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~ 178 (263)
.+-|...+.|+ ++|++++++|+.+...+..+++. +|+..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~-l~~~~ 56 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKL-IGTPD 56 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCC
Confidence 35577778887 79999999999999999999996 88643
No 265
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=62.93 E-value=27 Score=34.23 Aligned_cols=94 Identities=16% Similarity=0.197 Sum_probs=72.4
Q ss_pred CCCCcccHH--HHHH---hCCCcEEEEcC--CchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCC
Q 024758 137 ANRLYPGVS--DALK---LASSRIYIVTS--NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ 205 (263)
Q Consensus 137 ~~~lypGv~--e~L~---~~g~~laI~Tn--K~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~ 205 (263)
.-.+||..+ ++.+ +.|.++.++|- =|....+.+|.. +|.+.+---|+-+. ++.....+..+++.-+++
T Consensus 95 KevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s-~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd 173 (635)
T COG5610 95 KEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNS-FGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVD 173 (635)
T ss_pred eeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHh-cCCCccCceeeecceeehhcccchHHHHHHhhcCCC
Confidence 346888765 4555 78999999995 678888999996 99887655566543 346678888889888999
Q ss_pred CCcEEEEcCCh-hhHHHhhccCcCCCCcEEE
Q 024758 206 GLRLHFVEDRL-ATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 206 ~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~ 235 (263)
+.+-+-+||.. .|+..+++ -||.+..
T Consensus 174 ~~~w~H~GDN~~aD~l~pk~----LgI~Tlf 200 (635)
T COG5610 174 PKKWIHCGDNWVADYLKPKN----LGISTLF 200 (635)
T ss_pred hhheEEecCchhhhhcCccc----cchhHHH
Confidence 99999999986 57877776 7887644
No 266
>PRK10976 putative hydrolase; Provisional
Probab=62.19 E-value=11 Score=33.11 Aligned_cols=29 Identities=7% Similarity=-0.027 Sum_probs=25.9
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~gl~~~ 179 (263)
++|++++|+|+.+...+..+++. +|++.+
T Consensus 33 ~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (266)
T PRK10976 33 ARGIHFVFATGRHHVDVGQIRDN-LEIKSY 61 (266)
T ss_pred HCCCEEEEEcCCChHHHHHHHHh-cCCCCe
Confidence 78999999999999999999996 888643
No 267
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=62.11 E-value=14 Score=32.43 Aligned_cols=39 Identities=21% Similarity=0.268 Sum_probs=34.6
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~ 178 (263)
+.-|-..+.|+ ++|++++|+|+.+-..++.+++. +++..
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~-l~~~~ 61 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEE-LGLDG 61 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCc
Confidence 36677888887 89999999999999999999996 99876
No 268
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=61.02 E-value=42 Score=29.97 Aligned_cols=92 Identities=16% Similarity=0.187 Sum_probs=62.0
Q ss_pred CCCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCCC--CceEEcCCCC-CcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTIT--PDRLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~~~--f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~ 208 (263)
..|+|...|+|+ +.|+.+.--+|-+...++++.+ .|-.-. .-.-+|+..+ .+|..+..++++.+++
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~d--~GcaavMPlgsPIGSg~Gi~n~~~l~~i~~~~~vP--- 177 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGRGIQNPYNLRIIIERADVP--- 177 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHHH--TT-SEBEEBSSSTTT---SSTHHHHHHHHHHGSSS---
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--CCCCEEEecccccccCcCCCCHHHHHHHHHhcCCc---
Confidence 468999999999 8999999999999999999887 576411 1111233334 7899999999999887
Q ss_pred EEEEcC---ChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 209 LHFVED---RLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 209 ~l~VGD---s~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
+.|+= ++.|...|-+ .|++.|.|...
T Consensus 178 -vIvDAGiG~pSdaa~AME----lG~daVLvNTA 206 (247)
T PF05690_consen 178 -VIVDAGIGTPSDAAQAME----LGADAVLVNTA 206 (247)
T ss_dssp -BEEES---SHHHHHHHHH----TT-SEEEESHH
T ss_pred -EEEeCCCCCHHHHHHHHH----cCCceeehhhH
Confidence 66643 5678877776 89999999654
No 269
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=60.41 E-value=5.6 Score=37.43 Aligned_cols=31 Identities=16% Similarity=-0.053 Sum_probs=20.3
Q ss_pred CCCCcEEEEcCCCCChHHHHhhhhHhHHHhh
Q 024758 228 LDGWNLYLGNLFRFLCHILLLYLYAVALFAK 258 (263)
Q Consensus 228 ~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~ 258 (263)
+|++..-.-.||-+..+..+..|-|.|.+=+
T Consensus 307 ~~~~tlh~~~~g~n~hh~~ea~fKa~~~al~ 337 (354)
T PRK05446 307 AMGCTLHLKTKGKNDHHKVESLFKAFGRALR 337 (354)
T ss_pred cCCCEEEEEeccCChHHHHHHHHHHHHHHHH
Confidence 3666554456787777777777777666543
No 270
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=60.34 E-value=17 Score=32.21 Aligned_cols=37 Identities=14% Similarity=0.123 Sum_probs=31.9
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
+.|-..+.|+ ++|++++|+|+++...++.+++. +|++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQT-LGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCC
Confidence 4566777777 89999999999999999999996 9885
No 271
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=59.77 E-value=5.5 Score=32.87 Aligned_cols=21 Identities=24% Similarity=0.358 Sum_probs=16.6
Q ss_pred cEEEEecCcccccCHHHHHHH
Q 024758 3 DLYALDFDGVICDSCEETALS 23 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s 23 (263)
..+++|||.||+.|...-..+
T Consensus 7 l~LVLDLDeTLihs~~~~~~~ 27 (156)
T TIGR02250 7 LHLVLDLDQTLIHTTKDPTLS 27 (156)
T ss_pred eEEEEeCCCCcccccccCccc
Confidence 478999999999998764433
No 272
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=59.74 E-value=5.4 Score=33.08 Aligned_cols=14 Identities=21% Similarity=0.145 Sum_probs=12.5
Q ss_pred cEEEEecCcccccC
Q 024758 3 DLYALDFDGVICDS 16 (263)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (263)
+++++|+||||.+.
T Consensus 26 ~~vv~D~Dgtl~~~ 39 (170)
T TIGR01668 26 KGVVLDKDNTLVYP 39 (170)
T ss_pred CEEEEecCCccccC
Confidence 78999999999954
No 273
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=59.02 E-value=5 Score=42.49 Aligned_cols=14 Identities=21% Similarity=0.527 Sum_probs=12.1
Q ss_pred cEEEEecCcccccC
Q 024758 3 DLYALDFDGVICDS 16 (263)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (263)
++++||+||||+.-
T Consensus 592 RLlfLDyDGTLap~ 605 (934)
T PLN03064 592 RLLILGFNATLTEP 605 (934)
T ss_pred eEEEEecCceeccC
Confidence 58899999999963
No 274
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=57.53 E-value=1.7e+02 Score=32.05 Aligned_cols=38 Identities=16% Similarity=0.341 Sum_probs=31.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGV 176 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl 176 (263)
-+|=.||+|.++ ++|+|+-|.|.--.+.|..|--. .++
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~s-C~L 690 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYS-CRL 690 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHh-hcC
Confidence 378899999998 89999999999888877777653 544
No 275
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=57.32 E-value=5.4 Score=41.57 Aligned_cols=36 Identities=11% Similarity=-0.059 Sum_probs=22.9
Q ss_pred CceEEcCC------CC-CcHHHHHHHHhhC------CCCCCcEEEEcCC
Q 024758 180 PDRLYGLG------TG-PKVNVLKQLQKKP------EHQGLRLHFVEDR 215 (263)
Q Consensus 180 f~~v~G~~------~~-pkp~~l~~~l~~l------~~~~~~~l~VGDs 215 (263)
++.+-|.. .+ .|...+..+++++ +..++=++-|||-
T Consensus 661 ~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd 709 (797)
T PLN03063 661 VDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYF 709 (797)
T ss_pred cEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCC
Confidence 45555654 12 6788888888765 2344556778884
No 276
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=57.07 E-value=6.3 Score=36.16 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=14.1
Q ss_pred CcEEEEecCcccccCH
Q 024758 2 EDLYALDFDGVICDSC 17 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (263)
.|+|+||||.||....
T Consensus 3 ~k~~v~DlDnTlw~gv 18 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGV 18 (320)
T ss_pred eEEEEEcCCCCCCCCE
Confidence 4899999999998774
No 277
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=56.90 E-value=7.6 Score=27.27 Aligned_cols=25 Identities=32% Similarity=0.286 Sum_probs=15.3
Q ss_pred HHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 195 LKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 195 l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
+..++++.|+= +|+||+..|++-..
T Consensus 7 VqQLLK~fG~~----IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGII----IYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCEE----EEeCChHHHHHHHH
Confidence 45678888884 99999999998754
No 278
>COG4018 Uncharacterized protein conserved in archaea [Function unknown]
Probab=56.08 E-value=28 Score=32.76 Aligned_cols=64 Identities=14% Similarity=0.019 Sum_probs=47.8
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHH
Q 024758 193 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALF 256 (263)
Q Consensus 193 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~ 256 (263)
+.+.+..++.|..-+-+++|||...|+..+.+++-.-++++..|.-|-.++.+--..+.+-||+
T Consensus 209 k~VaEtArk~GkGveaI~hvgDGyDdli~G~kA~ve~~vDvfvvEGgPFNrA~dRL~AFa~Ava 272 (505)
T COG4018 209 KRVAETARKSGKGVEAILHVGDGYDDLIDGLKAAVEEVVDVFVVEGGPFNRAEDRLSAFARAVA 272 (505)
T ss_pred HHHHHHHHHhCCCceeEEEecCCcHHHHHHHHHHHHhcCcEEEEcCCCcchhhHHHHHHHHHHH
Confidence 4566677788888888999999999988887765567889999998887776644444444443
No 279
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=55.68 E-value=1.6e+02 Score=26.74 Aligned_cols=83 Identities=11% Similarity=0.107 Sum_probs=52.0
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC----C--------CC------CcH-HHHHHH
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL----G--------TG------PKV-NVLKQL 198 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~----~--------~~------pkp-~~l~~~ 198 (263)
-.|..++.+ ++++|+.|.|.--...++.++.+..++.. +..+++. + ++ .|- ..+...
T Consensus 140 Reg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~ 218 (298)
T KOG3128|consen 140 REGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNE 218 (298)
T ss_pred HHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHhh
Confidence 345555554 89999999999999999988886445433 2223221 0 00 222 223332
Q ss_pred HhhCC--CCCCcEEEEcCChhhHHHhhc
Q 024758 199 QKKPE--HQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 199 l~~l~--~~~~~~l~VGDs~~Di~aA~~ 224 (263)
.+.+. ....++++-|||..|+..|--
T Consensus 219 s~yf~~~~~~~nVillGdsigdl~ma~g 246 (298)
T KOG3128|consen 219 SEYFHQLAGRVNVILLGDSIGDLHMADG 246 (298)
T ss_pred hHHHhhccCCceEEEeccccccchhhcC
Confidence 33332 356789999999999999854
No 280
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=55.17 E-value=14 Score=30.84 Aligned_cols=53 Identities=11% Similarity=-0.060 Sum_probs=35.8
Q ss_pred cHHHHHHHHhhCC-CCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 191 KVNVLKQLQKKPE-HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 191 kp~~l~~~l~~l~-~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
..|.+......-. .++.|.+||||++ +||..|.. .|--.|+.+=|-+..+.+.
T Consensus 123 t~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~----mGs~gVw~~~gv~~~~n~i 177 (190)
T KOG2961|consen 123 TAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANR----MGSLGVWTEPGVRAEENFI 177 (190)
T ss_pred cHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhh----ccceeEEecccccccchHH
Confidence 3455554432221 5788999999997 69999965 6766667677776666554
No 281
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=54.99 E-value=1.2e+02 Score=27.04 Aligned_cols=73 Identities=10% Similarity=-0.033 Sum_probs=46.0
Q ss_pred hCCCcEEEEcC---CchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC
Q 024758 150 LASSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (263)
Q Consensus 150 ~~g~~laI~Tn---K~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 226 (263)
+.|.++..++. .+...++.+.++ +. .. +.|+ ....|+-+...+.+. + ++||.+.+-+..|-.
T Consensus 203 ~~g~~v~~i~~~~~~D~~~~~~l~~~-~~--~~-~~i~---~~~~~~e~~~~i~~~--~----~vI~~RlH~~I~A~~-- 267 (298)
T TIGR03609 203 DTGAFVLFLPFQQPQDLPLARALRDQ-LL--GP-AEVL---SPLDPEELLGLFASA--R----LVIGMRLHALILAAA-- 267 (298)
T ss_pred hhCCeEEEEeCCcchhHHHHHHHHHh-cC--CC-cEEE---ecCCHHHHHHHHhhC--C----EEEEechHHHHHHHH--
Confidence 34777766663 445555555553 32 22 2343 123565555555432 2 889999999999986
Q ss_pred cCCCCcEEEEcCC
Q 024758 227 ELDGWNLYLGNLF 239 (263)
Q Consensus 227 ~~Agi~~v~v~wG 239 (263)
+|++++++.|.
T Consensus 268 --~gvP~i~i~y~ 278 (298)
T TIGR03609 268 --AGVPFVALSYD 278 (298)
T ss_pred --cCCCEEEeecc
Confidence 89999999765
No 282
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=52.75 E-value=78 Score=31.57 Aligned_cols=91 Identities=13% Similarity=-0.020 Sum_probs=51.7
Q ss_pred HHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHH
Q 024758 144 VSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 220 (263)
Q Consensus 144 v~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~ 220 (263)
|...|. ..+-+++|++-......-..+...++++...-.+.. .-+.+...+-+++.|+. ++|||... ..
T Consensus 96 il~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i~~~~~~~---~~e~~~~v~~lk~~G~~----~vvG~~~~-~~ 167 (538)
T PRK15424 96 VMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRIEQRSYVT---EEDARGQINELKANGIE----AVVGAGLI-TD 167 (538)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCceEEEEecC---HHHHHHHHHHHHHCCCC----EEEcCchH-HH
Confidence 444444 455688999865443333333334666532211111 12334444445566776 88999877 66
Q ss_pred HhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 221 NVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 221 aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|++ +|+..+... +.+.+.+.+
T Consensus 168 ~A~~----~g~~g~~~~----s~e~i~~a~ 189 (538)
T PRK15424 168 LAEE----AGMTGIFIY----SAATVRQAF 189 (538)
T ss_pred HHHH----hCCceEEec----CHHHHHHHH
Confidence 7776 899998885 345554444
No 283
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=52.18 E-value=90 Score=28.02 Aligned_cols=65 Identities=11% Similarity=0.066 Sum_probs=42.3
Q ss_pred hCCCcEEEEcCCc---hHHHHHHHHHhh-CCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcCChh
Q 024758 150 LASSRIYIVTSNQ---SRFVETLLRELA-GVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLA 217 (263)
Q Consensus 150 ~~g~~laI~TnK~---~~~a~~iL~~~~-gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~ 217 (263)
..++.+-++|+-. .+.+.......+ .|++-|-.+++.... |-|...+++++..|++ |+.|||.+.
T Consensus 29 RedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~~iP---~IvI~D~p~ 98 (277)
T PRK00994 29 REDIDVRVVGSGAKMGPEEVEEVVKKMLEEWKPDFVIVISPNPAAPGPKKAREILKAAGIP---CIVIGDAPG 98 (277)
T ss_pred ccCceEEEeccCCCCCHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCchHHHHHHHhcCCC---EEEEcCCCc
Confidence 4578888888632 223333333211 455556556665543 8888889999988885 899999875
No 284
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=52.02 E-value=75 Score=31.57 Aligned_cols=84 Identities=14% Similarity=-0.018 Sum_probs=48.7
Q ss_pred HHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHH
Q 024758 144 VSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 220 (263)
Q Consensus 144 v~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~ 220 (263)
|...|. ..+-+++|++-......-..+...++++... +.-.+.-+.+...+-+++-|+. ++|||... ..
T Consensus 86 il~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i~~---~~~~~~~e~~~~~~~l~~~G~~----~viG~~~~-~~ 157 (526)
T TIGR02329 86 VMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDIVQ---RSYVTEEDARSCVNDLRARGIG----AVVGAGLI-TD 157 (526)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCceEE---EEecCHHHHHHHHHHHHHCCCC----EEECChHH-HH
Confidence 444454 4556899998654433333333346665322 1111112333344445556776 88999966 56
Q ss_pred HhhccCcCCCCcEEEEcCC
Q 024758 221 NVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 221 aA~~~~~~Agi~~v~v~wG 239 (263)
.|++ +|++.|.++-|
T Consensus 158 ~A~~----~gl~~ili~s~ 172 (526)
T TIGR02329 158 LAEQ----AGLHGVFLYSA 172 (526)
T ss_pred HHHH----cCCceEEEecH
Confidence 6666 89999999654
No 285
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=51.50 E-value=1.8e+02 Score=26.05 Aligned_cols=91 Identities=18% Similarity=0.188 Sum_probs=69.7
Q ss_pred CCCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCC--CCceEEcCCCC-CcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~~--~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~ 208 (263)
-.|+|...|+|+ +.|+.+.--||-+...++++.+ .|-.- ....-+|+..+ -+|..+.-++++..++
T Consensus 110 ~tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLee--~GcaavMPl~aPIGSg~G~~n~~~l~iiie~a~VP--- 184 (262)
T COG2022 110 KTLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLEE--AGCAAVMPLGAPIGSGLGLQNPYNLEIIIEEADVP--- 184 (262)
T ss_pred cccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHHh--cCceEeccccccccCCcCcCCHHHHHHHHHhCCCC---
Confidence 469999999999 8999999999999999999987 56531 22334455555 7899999999999887
Q ss_pred EEEEcC---ChhhHHHhhccCcCCCCcEEEEcC
Q 024758 209 LHFVED---RLATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 209 ~l~VGD---s~~Di~aA~~~~~~Agi~~v~v~w 238 (263)
+.|.= ++.|...|-+ -|++.|.+..
T Consensus 185 -viVDAGiG~pSdAa~aME----lG~DaVL~NT 212 (262)
T COG2022 185 -VIVDAGIGTPSDAAQAME----LGADAVLLNT 212 (262)
T ss_pred -EEEeCCCCChhHHHHHHh----cccceeehhh
Confidence 66643 4677777665 7888877754
No 286
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=51.11 E-value=38 Score=28.69 Aligned_cols=78 Identities=15% Similarity=0.075 Sum_probs=34.6
Q ss_pred cccCCCCcccHHHHHHhCCCcEEEEcCCchHHHH-------HHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCC
Q 024758 134 WIGANRLYPGVSDALKLASSRIYIVTSNQSRFVE-------TLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 134 ~~~~~~lypGv~e~L~~~g~~laI~TnK~~~~a~-------~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~ 206 (263)
..-.+.+.|+....++++|++++++...-.+..- .+.+. +-..||.|+..+ .+ -.+-+.++|.++
T Consensus 100 i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~---~l~~f~~i~aqs----~~-da~r~~~lG~~~ 171 (186)
T PF04413_consen 100 IWVETELWPNLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRP---LLSRFDRILAQS----EA-DAERFRKLGAPP 171 (186)
T ss_dssp EEES----HHHHHH-----S-EEEEEE--------------HHHHH---HGGG-SEEEESS----HH-HHHHHHTTT-S-
T ss_pred EEEccccCHHHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHH---HHHhCCEEEECC----HH-HHHHHHHcCCCc
Confidence 3456789998888888999999999865443321 12221 123478887654 22 234466899999
Q ss_pred CcEEEEcCChhhH
Q 024758 207 LRLHFVEDRLATL 219 (263)
Q Consensus 207 ~~~l~VGDs~~Di 219 (263)
+++...|+-..|+
T Consensus 172 ~~v~v~GnlKfd~ 184 (186)
T PF04413_consen 172 ERVHVTGNLKFDQ 184 (186)
T ss_dssp -SEEE---GGG--
T ss_pred ceEEEeCcchhcc
Confidence 9999999999886
No 287
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=50.14 E-value=2.4e+02 Score=27.96 Aligned_cols=60 Identities=12% Similarity=-0.041 Sum_probs=39.6
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE--------------cCCCCChHHHHhhhhHhHHH
Q 024758 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG--------------NLFRFLCHILLLYLYAVALF 256 (263)
Q Consensus 191 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v--------------~wGy~~~~~l~~~~~~~~~~ 256 (263)
+..-++.++.+.+.+ ++||.|.. -..|++ .|++++-+ .|||...-.|+..+.. +++
T Consensus 425 Dl~~l~~~l~~~~~D----lliG~s~~-k~~a~~----~giPlir~gfPi~Dr~~~~r~p~~GY~G~l~ll~~I~n-~ll 494 (515)
T TIGR01286 425 DLWHLRSLVFTEPVD----FLIGNSYG-KYIQRD----TLVPLIRIGFPIFDRHHLHRFPTIGYEGALQLLTTLVN-SIL 494 (515)
T ss_pred CHHHHHHHHhhcCCC----EEEECchH-HHHHHH----cCCCEEEecCCeeEEECCCCCceeehhhHHHHHHHHHH-HHH
Confidence 455566666655544 99999965 444555 79998755 4788888777765543 455
Q ss_pred hhhc
Q 024758 257 AKMD 260 (263)
Q Consensus 257 ~~~~ 260 (263)
+.+|
T Consensus 495 ~~~~ 498 (515)
T TIGR01286 495 DELD 498 (515)
T ss_pred Hhhh
Confidence 5554
No 288
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=49.87 E-value=22 Score=36.56 Aligned_cols=13 Identities=38% Similarity=0.761 Sum_probs=12.3
Q ss_pred cEEEEecCccccc
Q 024758 3 DLYALDFDGVICD 15 (263)
Q Consensus 3 ~~vlFDlDGTLvD 15 (263)
++++||+||||++
T Consensus 493 rLi~~D~DGTL~~ 505 (726)
T PRK14501 493 RLLLLDYDGTLVP 505 (726)
T ss_pred eEEEEecCccccC
Confidence 7999999999997
No 289
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=49.77 E-value=43 Score=26.70 Aligned_cols=47 Identities=19% Similarity=0.159 Sum_probs=34.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchH---------------HHHHHHHHhhCCCCCCceEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSR---------------FVETLLRELAGVTITPDRLYGL 186 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~---------------~a~~iL~~~~gl~~~f~~v~G~ 186 (263)
..+.+++.+.|+ ++|+.+.++|+.+.. .+...|++ .++. |-..+.|.
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k-~~ip-Yd~l~~~k 87 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQ-HNVP-YDEIYVGK 87 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHH-cCCC-CceEEeCC
Confidence 457889999997 789999999998876 44566675 6773 33444454
No 290
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=49.28 E-value=44 Score=32.32 Aligned_cols=65 Identities=20% Similarity=0.048 Sum_probs=51.0
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCCh--HHHHhhhhHhHHHh
Q 024758 193 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLC--HILLLYLYAVALFA 257 (263)
Q Consensus 193 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~--~~l~~~~~~~~~~~ 257 (263)
+-+.++.++.|-.-+-.++|||..-|+..+-+++-.-|+++.-|--|-.++ +.|..-+.|||+.+
T Consensus 209 ~~Va~~Akk~gkGveaI~~vGDGyddLI~G~~a~id~~vDvfVvEGgPFN~a~dRl~aFakaVa~sR 275 (505)
T PF10113_consen 209 EEVAELAKKYGKGVEAIMHVGDGYDDLITGLKACIDMGVDVFVVEGGPFNRAKDRLKAFAKAVAASR 275 (505)
T ss_pred HHHHHHHHHhCCCceEEEEecCChHHHHHHHHHHHhcCCcEEEEeCCCcccchhHHHHHHHHHHHhe
Confidence 456677888888888899999999999988876666899999898887665 45565666676654
No 291
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=47.40 E-value=43 Score=30.84 Aligned_cols=42 Identities=29% Similarity=0.592 Sum_probs=31.5
Q ss_pred cCCCCcccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhhCCCCCCceEE
Q 024758 136 GANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLY 184 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g-~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~ 184 (263)
..-.|||...|+++ +.| ++++|+||-.. ..+++. +. .+|.++
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~-L~---~~dql~ 134 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEE-LK---LPDQLY 134 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHH-hc---cCCEEE
Confidence 34579999999999 788 79999999998 445553 32 356665
No 292
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=46.69 E-value=1.1e+02 Score=22.08 Aligned_cols=54 Identities=13% Similarity=0.301 Sum_probs=39.1
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 216 (263)
|--|++-+.+-.++++ +|+ ..|-|+.++.-...+.++++.+. +...+.+.=|.+
T Consensus 16 vS~s~DGe~ia~~~~~-~G~----~~iRGSs~rgg~~Alr~~~~~lk-~G~~~~itpDGP 69 (74)
T PF04028_consen 16 VSRSRDGELIARVLER-FGF----RTIRGSSSRGGARALREMLRALK-EGYSIAITPDGP 69 (74)
T ss_pred EccCcCHHHHHHHHHH-cCC----CeEEeCCCCcHHHHHHHHHHHHH-CCCeEEEeCCCC
Confidence 3337899999999995 987 57999877766677777777766 444556666654
No 293
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=46.34 E-value=94 Score=25.21 Aligned_cols=79 Identities=11% Similarity=0.056 Sum_probs=52.7
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhhCCCCC---------CceEEcCCCCCcHHHHHHHHhhCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAGVTIT---------PDRLYGLGTGPKVNVLKQLQKKPEH 204 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK-~~~~a~~iL~~~~gl~~~---------f~~v~G~~~~pkp~~l~~~l~~l~~ 204 (263)
...||.++..|. ++|+.++++|+. ....+.+.|+. |.+..- |+.+.-. .+.|-..+.++-+..+.
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~-fkvk~~Gvlkps~e~ft~~~~g-~gsklghfke~~n~s~~ 120 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLET-FKVKQTGVLKPSLEEFTFEAVG-DGSKLGHFKEFTNNSNS 120 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHH-hccCcccccchhhhcCceeeec-CcccchhHHHHhhccCc
Confidence 467888888887 899999999975 45778899995 776432 2222211 12455556677666676
Q ss_pred CCCcEEEEcCChhh
Q 024758 205 QGLRLHFVEDRLAT 218 (263)
Q Consensus 205 ~~~~~l~VGDs~~D 218 (263)
.-.+..++.|-...
T Consensus 121 ~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 121 IEKNKQVFDDESRN 134 (144)
T ss_pred chhceeeecccccC
Confidence 66677777776544
No 294
>PLN02580 trehalose-phosphatase
Probab=45.76 E-value=23 Score=33.84 Aligned_cols=73 Identities=14% Similarity=0.012 Sum_probs=37.9
Q ss_pred cCCchHHHHHHHHHhhCCCCC-C--ceEEcCCCCCcHHHHHHHHhh-CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTIT-P--DRLYGLGTGPKVNVLKQLQKK-PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~-f--~~v~G~~~~pkp~~l~~~l~~-l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
+||.. .++.+|++ +|+... + -..+| |...+-+++..+-.. .|. .|.||..... .
T Consensus 300 ~~KG~-Av~~Ll~~-~g~~~~d~~~pi~iG-DD~TDedmF~~L~~~~~G~----~I~Vgn~~~~---------------t 357 (384)
T PLN02580 300 WNKGK-AVEFLLES-LGLSNCDDVLPIYIG-DDRTDEDAFKVLREGNRGY----GILVSSVPKE---------------S 357 (384)
T ss_pred CCHHH-HHHHHHHh-cCCCcccceeEEEEC-CCchHHHHHHhhhccCCce----EEEEecCCCC---------------c
Confidence 35553 45678885 888754 1 13445 444677777654321 133 2566632211 1
Q ss_pred EEcCCCCChHHHHhhhhHh
Q 024758 235 LGNLFRFLCHILLLYLYAV 253 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~ 253 (263)
.+.|--.+++++.+-|...
T Consensus 358 ~A~y~L~dp~eV~~~L~~L 376 (384)
T PLN02580 358 NAFYSLRDPSEVMEFLKSL 376 (384)
T ss_pred cceEEcCCHHHHHHHHHHH
Confidence 2345556677766555443
No 295
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=45.71 E-value=11 Score=31.38 Aligned_cols=13 Identities=38% Similarity=0.562 Sum_probs=11.0
Q ss_pred EEEEecCcccccC
Q 024758 4 LYALDFDGVICDS 16 (263)
Q Consensus 4 ~vlFDlDGTLvDS 16 (263)
.|++|.||||.-|
T Consensus 1 VVvsDIDGTiT~S 13 (157)
T PF08235_consen 1 VVVSDIDGTITKS 13 (157)
T ss_pred CEEEeccCCcCcc
Confidence 4789999999766
No 296
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=44.86 E-value=9.1 Score=31.59 Aligned_cols=50 Identities=18% Similarity=0.144 Sum_probs=33.4
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCC--chHHHH----HHHHHhhCCCCCCceEEcCC
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSN--QSRFVE----TLLRELAGVTITPDRLYGLG 187 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK--~~~~a~----~iL~~~~gl~~~f~~v~G~~ 187 (263)
+...-|+..++++ -..+.++|||.. ...+.+ =+++. |..-.|-..|+++.
T Consensus 66 nL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~-FPFi~~qn~vfCgn 123 (180)
T COG4502 66 NLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEK-FPFISYQNIVFCGN 123 (180)
T ss_pred hcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHH-CCCCChhhEEEecC
Confidence 3467899999999 678999999976 333333 34453 65555556666654
No 297
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=44.40 E-value=1.7e+02 Score=26.96 Aligned_cols=29 Identities=21% Similarity=0.423 Sum_probs=23.8
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEcCCchH
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVTSNQSR 164 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~ 164 (263)
.+..++|.+.++++ ++|+.++|.||-...
T Consensus 139 GEPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 139 GEPTLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred ccccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 34457899999999 789999999998653
No 298
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=43.86 E-value=14 Score=31.59 Aligned_cols=17 Identities=29% Similarity=0.233 Sum_probs=15.4
Q ss_pred cEEEEecCcccccCHHH
Q 024758 3 DLYALDFDGVICDSCEE 19 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~d 19 (263)
++++||.||||..-.++
T Consensus 6 k~lflDRDGtin~d~~~ 22 (181)
T COG0241 6 KALFLDRDGTINIDKGD 22 (181)
T ss_pred cEEEEcCCCceecCCCc
Confidence 69999999999988886
No 299
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=43.42 E-value=96 Score=28.55 Aligned_cols=83 Identities=13% Similarity=0.083 Sum_probs=59.1
Q ss_pred cEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 154 ~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
.++=+|...+..++.+.++ ..+ -.|+|+..-++..-+.+++++.+.+ +++|+ +..|+.... ..|...
T Consensus 192 TIC~aT~~RQ~a~~~La~~-vD~----miVVGg~~SsNT~kL~~i~~~~~~~---t~~Ie-~~~el~~~~----l~~~~~ 258 (298)
T PRK01045 192 DICYATQNRQEAVKELAPQ-ADL----VIVVGSKNSSNSNRLREVAEEAGAP---AYLID-DASEIDPEW----FKGVKT 258 (298)
T ss_pred CcchhhHHHHHHHHHHHhh-CCE----EEEECCCCCccHHHHHHHHHHHCCC---EEEEC-ChHHCcHHH----hcCCCE
Confidence 4566788888888887764 322 2566765446777788888877633 67775 457776543 478999
Q ss_pred EEEcCCCCChHHHHhh
Q 024758 234 YLGNLFRFLCHILLLY 249 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~ 249 (263)
||++=|-.+++.+.+-
T Consensus 259 VGitaGASTP~~li~e 274 (298)
T PRK01045 259 VGVTAGASAPEWLVQE 274 (298)
T ss_pred EEEEecCCCCHHHHHH
Confidence 9999999999988643
No 300
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=42.65 E-value=55 Score=24.57 Aligned_cols=42 Identities=14% Similarity=-0.130 Sum_probs=28.9
Q ss_pred CCcEEEE-cCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhh
Q 024758 206 GLRLHFV-EDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLY 251 (263)
Q Consensus 206 ~~~~l~V-GDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~ 251 (263)
+...+.+ ||+..=+.+|.. +|+.++-++.|+...+++.+.+.
T Consensus 40 ~~~lvIt~gdR~di~~~a~~----~~i~~iIltg~~~~~~~v~~la~ 82 (105)
T PF07085_consen 40 PGDLVITPGDREDIQLAAIE----AGIACIILTGGLEPSEEVLELAK 82 (105)
T ss_dssp TTEEEEEETT-HHHHHHHCC----TTECEEEEETT----HHHHHHHH
T ss_pred CCeEEEEeCCcHHHHHHHHH----hCCCEEEEeCCCCCCHHHHHHHH
Confidence 3677888 999766677765 89999999999998888876554
No 301
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=40.86 E-value=85 Score=33.16 Aligned_cols=104 Identities=12% Similarity=0.058 Sum_probs=67.2
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC---------------CCce----------EEcCCCC-
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI---------------TPDR----------LYGLGTG- 189 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~---------------~f~~----------v~G~~~~- 189 (263)
+|-+.+++... +.|+++.++|.-....++.+.+. -||-. ..+. |.|.+-+
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~-vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~ 668 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKS-VGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPD 668 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhh-eeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccc
Confidence 34456666666 89999999999888888888875 77421 1111 2333322
Q ss_pred CcHHHHHHHHhhCC------CCCCcEE--------------EEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPE------HQGLRLH--------------FVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~------~~~~~~l--------------~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
-.++-+.++++... .+|++-+ ..||+.||-=|-|+ |. |||.-|+...+.-.++
T Consensus 669 ~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKK----AD---IGVAMGiaGSDvsKqA 741 (1019)
T KOG0203|consen 669 MSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKK----AD---IGVAMGIAGSDVSKQA 741 (1019)
T ss_pred cCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcc----cc---cceeeccccchHHHhh
Confidence 34566666665543 3444333 45999999988887 66 4788888877765544
Q ss_pred h
Q 024758 250 L 250 (263)
Q Consensus 250 ~ 250 (263)
+
T Consensus 742 A 742 (1019)
T KOG0203|consen 742 A 742 (1019)
T ss_pred c
Confidence 3
No 302
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=39.33 E-value=1.9e+02 Score=24.05 Aligned_cols=88 Identities=11% Similarity=0.054 Sum_probs=51.8
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhh---CCCCCCceEEcC-C---------C-CCcHHHHH--
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELA---GVTITPDRLYGL-G---------T-GPKVNVLK-- 196 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~---~a~~iL~~~~---gl~~~f~~v~G~-~---------~-~pkp~~l~-- 196 (263)
...|||.++.. ++|+++.-+|+.+-- .++.-|+. . |...+.-.+..+ + . .++|+.+.
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~-~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~ 105 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQ-HQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKIA 105 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHH-HHhCCccCCCCCEEECCcchhhhhhccccccChHHHHHH
Confidence 45699999999 899999999999854 44455554 3 222222223322 1 1 14565433
Q ss_pred ---HHHhhCCCCCCcEE--EEcCChhhHHHhhccCcCCCCc
Q 024758 197 ---QLQKKPEHQGLRLH--FVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 197 ---~~l~~l~~~~~~~l--~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
.+...+. ....-+ =+|.+.+|+.+=++ +|++
T Consensus 106 ~L~~l~~~f~-~~~~pf~agfGN~~tDv~aY~~----vGip 141 (157)
T PF08235_consen 106 CLRDLRALFP-PDGNPFYAGFGNRSTDVIAYKA----VGIP 141 (157)
T ss_pred HHHHHHHhcC-CCCCeEEEecCCcHHHHHHHHH----cCCC
Confidence 3333221 112222 37899999998876 7775
No 303
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=38.93 E-value=20 Score=32.15 Aligned_cols=15 Identities=20% Similarity=0.375 Sum_probs=13.4
Q ss_pred cEEEEecCcccccCH
Q 024758 3 DLYALDFDGVICDSC 17 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (263)
++++||+||||.+..
T Consensus 159 ~~~~~D~dgtl~~~~ 173 (300)
T PHA02530 159 KAVIFDIDGTLAKMG 173 (300)
T ss_pred CEEEEECCCcCcCCC
Confidence 589999999999974
No 304
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=38.46 E-value=17 Score=30.66 Aligned_cols=12 Identities=25% Similarity=0.357 Sum_probs=11.4
Q ss_pred cEEEEecCcccc
Q 024758 3 DLYALDFDGVIC 14 (263)
Q Consensus 3 ~~vlFDlDGTLv 14 (263)
+++++|||-|||
T Consensus 29 kgvi~DlDNTLv 40 (175)
T COG2179 29 KGVILDLDNTLV 40 (175)
T ss_pred cEEEEeccCcee
Confidence 789999999998
No 305
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=37.99 E-value=21 Score=32.64 Aligned_cols=16 Identities=13% Similarity=0.295 Sum_probs=13.4
Q ss_pred CcEEEEecCcccccCH
Q 024758 2 EDLYALDFDGVICDSC 17 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (263)
+..|+||||-||+.+.
T Consensus 122 phVIVfDlD~TLItd~ 137 (297)
T PF05152_consen 122 PHVIVFDLDSTLITDE 137 (297)
T ss_pred CcEEEEECCCcccccC
Confidence 4689999999999653
No 306
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=37.64 E-value=1.7e+02 Score=31.09 Aligned_cols=82 Identities=21% Similarity=0.218 Sum_probs=57.0
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC---CceEEcCCCC-----------Cc--------H-
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT---PDRLYGLGTG-----------PK--------V- 192 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~---f~~v~G~~~~-----------pk--------p- 192 (263)
+.-|||++.++ .+|+++-.||.-.--.|+.|-.+ .||-.. |-.+-|.+-. || |
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~e-CGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARE-CGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHH-cccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 45799999999 89999999999999999999996 999432 3344454310 22 1
Q ss_pred --HHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 193 --NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 193 --~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
..+-+.+++.| +=+..-||..||.-|-|+
T Consensus 726 DK~lLVk~L~~~g---~VVAVTGDGTNDaPALke 756 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG---EVVAVTGDGTNDAPALKE 756 (1034)
T ss_pred hHHHHHHHHHhcC---cEEEEecCCCCCchhhhh
Confidence 23334444332 223467999999988877
No 307
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=37.49 E-value=23 Score=30.97 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=20.3
Q ss_pred EEEEecCcccccCHHHHHHHHHHHHHHh
Q 024758 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~di~~s~~~~~~~~ 31 (263)
+++||-||||.=+...+..-+...++++
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~~l~~l 40 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLEFLQKL 40 (252)
T ss_pred EEEEecCCccccccccCCHHHHHHHHHH
Confidence 8999999999887765555555555554
No 308
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=37.20 E-value=54 Score=33.74 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=31.9
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~ 178 (263)
.++-..+.|+ ++|++++|+|+++...+..+++. +|+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~-Lgl~~ 474 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNE-LGIKD 474 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 4566677777 89999999999999999999996 88753
No 309
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=37.08 E-value=1.1e+02 Score=27.97 Aligned_cols=83 Identities=14% Similarity=0.051 Sum_probs=59.8
Q ss_pred cEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 154 ~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
.++=+|...+..++.+.++ ..+ =.|+|+..-++..-+.+++++.|. ++++|+ +..|+.... ..|...
T Consensus 190 TIC~AT~~RQ~a~~~la~~-vD~----miVVGg~nSsNT~rL~ei~~~~~~---~t~~Ie-~~~el~~~~----l~~~~~ 256 (280)
T TIGR00216 190 TICYATQNRQDAVKELAPE-VDL----MIVIGGKNSSNTTRLYEIAEEHGP---PSYLIE-TAEELPEEW----LKGVKV 256 (280)
T ss_pred CcccccHHHHHHHHHHHhh-CCE----EEEECCCCCchHHHHHHHHHHhCC---CEEEEC-ChHHCCHHH----hCCCCE
Confidence 4677888888888888775 322 246676533677778888887764 367774 557876543 478899
Q ss_pred EEEcCCCCChHHHHhh
Q 024758 234 YLGNLFRFLCHILLLY 249 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~ 249 (263)
||+|=|-.+++.+.+-
T Consensus 257 VGiTAGASTP~~li~e 272 (280)
T TIGR00216 257 VGITAGASTPDWIIEE 272 (280)
T ss_pred EEEEecCCCCHHHHHH
Confidence 9999999999988753
No 310
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=37.04 E-value=1.2e+02 Score=27.74 Aligned_cols=83 Identities=13% Similarity=0.049 Sum_probs=59.1
Q ss_pred cEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 154 ~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
.++-+|...+..++.+-++ ..+ =.|+|+..-++..-+.+++++.+. ++.+|+ +..|+.... ..|...
T Consensus 191 TIC~aT~~RQ~a~~~La~~-vD~----miVVGg~~SsNT~rL~eia~~~~~---~t~~Ie-~~~el~~~~----~~~~~~ 257 (281)
T PRK12360 191 TICSATKKRQESAKELSKE-VDV----MIVIGGKHSSNTQKLVKICEKNCP---NTFHIE-TADELDLEM----LKDYKI 257 (281)
T ss_pred CcchhhhhHHHHHHHHHHh-CCE----EEEecCCCCccHHHHHHHHHHHCC---CEEEEC-ChHHCCHHH----hCCCCE
Confidence 4677888888888887664 322 246676533667778888877663 367774 557876543 478999
Q ss_pred EEEcCCCCChHHHHhh
Q 024758 234 YLGNLFRFLCHILLLY 249 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~ 249 (263)
||++=|-.+++.+.+.
T Consensus 258 VGitaGASTP~~li~e 273 (281)
T PRK12360 258 IGITAGASTPDWIIEE 273 (281)
T ss_pred EEEEccCCCCHHHHHH
Confidence 9999999999988753
No 311
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=36.50 E-value=72 Score=26.48 Aligned_cols=18 Identities=11% Similarity=-0.140 Sum_probs=8.8
Q ss_pred CCCcEEEEcCCCCChHHH
Q 024758 229 DGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 229 Agi~~v~v~wGy~~~~~l 246 (263)
++.+++.|.-|.-..+.+
T Consensus 100 ~~pdiv~vglG~PkQE~~ 117 (172)
T PF03808_consen 100 SGPDIVFVGLGAPKQERW 117 (172)
T ss_pred cCCCEEEEECCCCHHHHH
Confidence 455555555554444433
No 312
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=36.45 E-value=1.4e+02 Score=27.30 Aligned_cols=82 Identities=13% Similarity=-0.033 Sum_probs=50.3
Q ss_pred EEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCc----HHH---HHHHHhhCCCCCCcEEEEcCChhhHHHhhccCc
Q 024758 155 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPK----VNV---LKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (263)
Q Consensus 155 laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pk----p~~---l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 227 (263)
..|+|+-.......+++. |++..-++..+|...... +.. +.+++++ ..|+=++..||+..-+.++. ++.
T Consensus 32 ~~~~tg~h~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDiv~~~gd~~~~la~a~-aa~ 107 (365)
T TIGR00236 32 YVIVTAQHREMLDQVLDL-FHLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLE--EKPDIVLVQGDTTTTLAGAL-AAF 107 (365)
T ss_pred EEEEeCCCHHHHHHHHHh-cCCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHH--cCCCEEEEeCCchHHHHHHH-HHH
Confidence 578888888888999985 999744455555421111 222 2233333 34666677789865444333 234
Q ss_pred CCCCcEEEEcCCC
Q 024758 228 LDGWNLYLGNLFR 240 (263)
Q Consensus 228 ~Agi~~v~v~wGy 240 (263)
..|++++-+..|-
T Consensus 108 ~~~ipv~h~~~g~ 120 (365)
T TIGR00236 108 YLQIPVGHVEAGL 120 (365)
T ss_pred HhCCCEEEEeCCC
Confidence 5899998876654
No 313
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=36.40 E-value=73 Score=30.55 Aligned_cols=87 Identities=21% Similarity=0.281 Sum_probs=55.6
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchH------------HHHHHHHHhhCCCCCCceEEcCC-----CCCcHHHHHHH
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSR------------FVETLLRELAGVTITPDRLYGLG-----TGPKVNVLKQL 198 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~------------~a~~iL~~~~gl~~~f~~v~G~~-----~~pkp~~l~~~ 198 (263)
.+||-+..-|+ +.|+.++|.||+... -++.++.. +|+- |. +.++. .+|-.-+....
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~an-l~vP--i~-~~~A~~~~~yRKP~tGMwe~~ 179 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVAN-LGVP--IQ-LLAAIIKGKYRKPSTGMWEFL 179 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHh-cCCc--eE-EeeeccCCcccCcchhHHHHH
Confidence 57899998888 899999999987532 34556664 5553 32 22222 23666777776
Q ss_pred HhhCC----CCCCcEEEEcCC---------------hhhHHHhhccCcCCCCcE
Q 024758 199 QKKPE----HQGLRLHFVEDR---------------LATLKNVIKEPELDGWNL 233 (263)
Q Consensus 199 l~~l~----~~~~~~l~VGDs---------------~~Di~aA~~~~~~Agi~~ 233 (263)
.+..+ +.-..++||||. ..|+.-|-| +|+.+
T Consensus 180 ~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN----~gvkF 229 (422)
T KOG2134|consen 180 KRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAAN----AGVKF 229 (422)
T ss_pred HHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHh----cCCcc
Confidence 65554 334466799884 346666654 77764
No 314
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=36.21 E-value=13 Score=26.97 Aligned_cols=10 Identities=40% Similarity=0.783 Sum_probs=8.7
Q ss_pred EEEecCcccc
Q 024758 5 YALDFDGVIC 14 (263)
Q Consensus 5 vlFDlDGTLv 14 (263)
+=|||+|.|+
T Consensus 3 ~RFdf~G~l~ 12 (73)
T PF08620_consen 3 LRFDFDGNLL 12 (73)
T ss_pred ccccCCCCEe
Confidence 3499999999
No 315
>PRK10494 hypothetical protein; Provisional
Probab=35.83 E-value=28 Score=31.15 Aligned_cols=53 Identities=9% Similarity=-0.063 Sum_probs=25.2
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc-EEEEcCCCCC
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN-LYLGNLFRFL 242 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~-~v~v~wGy~~ 242 (263)
+..+...+.+.++|+++++++.-+.|.+..+.|+.+++..|.+ ++.||-.|+-
T Consensus 137 sEA~~~~~~l~~lGVp~~~Ii~e~~s~nT~eNa~~~~~~~~~~~iiLVTsa~Hm 190 (259)
T PRK10494 137 STAEVGARVAQSLGVPREDIITLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHL 190 (259)
T ss_pred CHHHHHHHHHHHcCCCHHHeeeCCCCCCHHHHHHHHHHHhCCCCEEEECCHHHH
Confidence 3445555555555555555554444444444444433333333 4555554443
No 316
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=35.51 E-value=40 Score=35.59 Aligned_cols=29 Identities=17% Similarity=0.230 Sum_probs=19.9
Q ss_pred CCcEEEEecCcccccCH-------HHHHHHHHHHHH
Q 024758 1 MEDLYALDFDGVICDSC-------EETALSAVKAAR 29 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~-------~di~~s~~~~~~ 29 (263)
|.++|+||+||||++.. +++...++..++
T Consensus 595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~ 630 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCR 630 (854)
T ss_pred cCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHh
Confidence 35799999999999654 355555554333
No 317
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.11 E-value=2.3e+02 Score=24.80 Aligned_cols=78 Identities=18% Similarity=0.214 Sum_probs=48.4
Q ss_pred cEEEEc-CCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChh---------hHHHhh
Q 024758 154 RIYIVT-SNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLA---------TLKNVI 223 (263)
Q Consensus 154 ~laI~T-nK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~---------Di~aA~ 223 (263)
..+++| +++.+.+-+++++ ||+ ..|.|+..+.-...++.+++.|. ...+++|.=|.+. =+.-|+
T Consensus 70 ~~amvS~s~DGEliA~~l~k-fG~----~~IRGSs~Kgg~~Alr~l~k~Lk-~G~~i~itpDgPkGp~~~~~~Gii~LA~ 143 (214)
T COG2121 70 IYAMVSPSRDGELIARLLEK-FGL----RVIRGSSNKGGISALRALLKALK-QGKSIAITPDGPKGPVHKIGDGIIALAQ 143 (214)
T ss_pred EEEEEcCCcCHHHHHHHHHH-cCc----eEEeccCCcchHHHHHHHHHHHh-CCCcEEEcCCCCCCCceeccchhhHhhH
Confidence 345555 7899999999996 998 58999876544445555555542 2233455555544 133344
Q ss_pred ccCcCCCCcEEEEcCCCC
Q 024758 224 KEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 224 ~~~~~Agi~~v~v~wGy~ 241 (263)
. .|++.+-|.+-++
T Consensus 144 ~----sg~pi~pv~~~~s 157 (214)
T COG2121 144 K----SGVPIIPVGVATS 157 (214)
T ss_pred h----cCCCeEEEEEeee
Confidence 4 7777776655443
No 318
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=34.45 E-value=21 Score=34.74 Aligned_cols=15 Identities=33% Similarity=0.450 Sum_probs=13.0
Q ss_pred cEEEEecCcccccCH
Q 024758 3 DLYALDFDGVICDSC 17 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (263)
+.|++|+||||.-|=
T Consensus 376 kiVVsDiDGTITkSD 390 (580)
T COG5083 376 KIVVSDIDGTITKSD 390 (580)
T ss_pred cEEEEecCCcEEehh
Confidence 789999999998663
No 319
>COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion]
Probab=33.52 E-value=2.6e+02 Score=24.68 Aligned_cols=79 Identities=15% Similarity=0.114 Sum_probs=44.8
Q ss_pred hCCCcEEEEcCC--c-----hHHHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHH
Q 024758 150 LASSRIYIVTSN--Q-----SRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 221 (263)
Q Consensus 150 ~~g~~laI~TnK--~-----~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~a 221 (263)
..++.+-|+++- - +..+..+++. + ..-|-..+|.... |-|.-.++++++.+++ ++.|||.+ .. .
T Consensus 29 Redi~vrVvgsgaKM~Pe~veaav~~~~e~-~--~pDfvi~isPNpaaPGP~kARE~l~~s~~P---aiiigDaP-g~-~ 100 (277)
T COG1927 29 REDIEVRVVGSGAKMDPECVEAAVTEMLEE-F--NPDFVIYISPNPAAPGPKKAREILSDSDVP---AIIIGDAP-GL-K 100 (277)
T ss_pred cCCceEEEeccccccChHHHHHHHHHHHHh-c--CCCEEEEeCCCCCCCCchHHHHHHhhcCCC---EEEecCCc-cc-h
Confidence 577888888763 2 2233445553 3 2223222233333 7788888888877776 79999997 22 2
Q ss_pred hhccCcCCCCcEEEE
Q 024758 222 VIKEPELDGWNLYLG 236 (263)
Q Consensus 222 A~~~~~~Agi~~v~v 236 (263)
+|..-+..|.-.|.+
T Consensus 101 vkdeleeqGlGYIiv 115 (277)
T COG1927 101 VKDELEEQGLGYIIV 115 (277)
T ss_pred hHHHHHhcCCeEEEe
Confidence 222222356555444
No 320
>PTZ00445 p36-lilke protein; Provisional
Probab=33.44 E-value=18 Score=31.81 Aligned_cols=13 Identities=31% Similarity=0.393 Sum_probs=12.5
Q ss_pred cEEEEecCccccc
Q 024758 3 DLYALDFDGVICD 15 (263)
Q Consensus 3 ~~vlFDlDGTLvD 15 (263)
|+|++|||=||++
T Consensus 44 k~Va~D~DnTlI~ 56 (219)
T PTZ00445 44 KVIASDFDLTMIT 56 (219)
T ss_pred eEEEecchhhhhh
Confidence 7999999999998
No 321
>PLN02887 hydrolase family protein
Probab=33.26 E-value=1e+02 Score=31.15 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=33.0
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
.+-|...+.|+ ++|++++|+|+.+...+..+++. +|+.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~-L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKM-VDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCcc
Confidence 45677778887 89999999999999999999996 8875
No 322
>KOG3217 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=33.11 E-value=66 Score=26.61 Aligned_cols=70 Identities=10% Similarity=0.136 Sum_probs=40.8
Q ss_pred cCCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024758 136 GANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (263)
Q Consensus 136 ~~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 215 (263)
....|=|-..+.|+++|+++ ...++++-...| .+||.|+|-|....-++.+.+..+-.....++.+.|+-
T Consensus 52 ~G~~PD~R~~s~lK~hGI~~-------~H~aRqit~~DF---~~FDYI~~MDesN~~dL~~~a~~~~~~~kakV~Llgsy 121 (159)
T KOG3217|consen 52 TGRSPDPRTLSILKKHGIKI-------DHLARQITTSDF---REFDYILAMDESNLRDLLRKASNQPKGSKAKVLLLGSY 121 (159)
T ss_pred cCCCCChHHHHHHHHcCCcc-------hhhcccccHhHh---hhcceeEEecHHHHHHHHHHhccCCCCcceEEEEeecc
Confidence 34578888888888888872 233444433212 46899999774333333333322223344578888863
No 323
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=33.09 E-value=1.3e+02 Score=28.84 Aligned_cols=77 Identities=13% Similarity=0.119 Sum_probs=52.5
Q ss_pred cEEEEcCCch-HHHHHHHHHhhCCCC--CCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCC
Q 024758 154 RIYIVTSNQS-RFVETLLRELAGVTI--TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 154 ~laI~TnK~~-~~a~~iL~~~~gl~~--~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
-=.+|||..- ..+-++| .+||.. ..+-|+....-.|-..+.+|..++|. +-.-+.|||..---.+||+ -+
T Consensus 372 vnVlvTttqLipalaKvL--L~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~----ln 444 (468)
T KOG3107|consen 372 VNVLVTTTQLIPALAKVL--LYGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKA----LN 444 (468)
T ss_pred eEEEEeccchhHHHHHHH--HHhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHh----hC
Confidence 3455665543 3333333 256654 44556665444777889999999998 5667889999888888887 89
Q ss_pred CcEEEEc
Q 024758 231 WNLYLGN 237 (263)
Q Consensus 231 i~~v~v~ 237 (263)
|+++=.+
T Consensus 445 ~PfwrI~ 451 (468)
T KOG3107|consen 445 MPFWRIS 451 (468)
T ss_pred CceEeec
Confidence 9986554
No 324
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=32.50 E-value=93 Score=29.57 Aligned_cols=73 Identities=21% Similarity=0.137 Sum_probs=50.3
Q ss_pred CCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc-eEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD-RLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 139 ~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~-~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
+-=|||.-.|. .+.+.+.|.|+...-.+..++++ +.-..|.. .+++..++ -.+.-+.. +..++-+++++++|.
T Consensus 214 ~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~-lDP~g~IsYkLfr~~t~y~~G~HvKd-ls~LNRdl~kVivVd 290 (393)
T KOG2832|consen 214 KKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDA-LDPKGYISYKLFRGATKYEEGHHVKD-LSKLNRDLQKVIVVD 290 (393)
T ss_pred ccCchHHHHHHhhcccceEEEEecCCccchhhhHhh-cCCcceEEEEEecCcccccCccchhh-hhhhccccceeEEEE
Confidence 34589999998 78899999999999999999996 54433322 23343332 22222333 456788899999995
No 325
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=32.29 E-value=27 Score=31.53 Aligned_cols=103 Identities=11% Similarity=-0.058 Sum_probs=59.2
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCC-CCCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl-~~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
+.-.||+.++|+ .+-+.+.|-|+--+..+.++++. +.= ...+..-+=.++ --+.-.+.+-+..+|.+-.++++|.
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~-LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiD 208 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDI-LDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVD 208 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHH-ccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEc
Confidence 455788888888 56688888888888888888885 432 111111111110 0011111111245566777899999
Q ss_pred CChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 214 DRLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 214 Ds~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
|++.-...=-+ +||++-.---+-. ..||
T Consensus 209 NsP~sy~~~p~----NgIpI~sw~~d~~-D~eL 236 (262)
T KOG1605|consen 209 NSPQSYRLQPE----NGIPIKSWFDDPT-DTEL 236 (262)
T ss_pred CChHHhccCcc----CCCcccccccCCC-hHHH
Confidence 99887765443 7887744333332 3444
No 326
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=31.86 E-value=1.1e+02 Score=27.61 Aligned_cols=57 Identities=12% Similarity=-0.028 Sum_probs=46.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
.+..-+-+-+..+|++-.+...|||...+|..+-+.+... .++|-+|-|-|.-+.=.
T Consensus 21 tNa~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r-~D~vI~tGGLGPT~DDi 77 (255)
T COG1058 21 TNAAFLADELTELGVDLARITTVGDNPDRIVEALREASER-ADVVITTGGLGPTHDDL 77 (255)
T ss_pred chHHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHhC-CCEEEECCCcCCCccHh
Confidence 6777888888899999999999999999999887765445 89999999887655443
No 327
>KOG1123 consensus RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, 3'-5' helicase subunit SSL2 [Transcription; Replication, recombination and repair]
Probab=31.71 E-value=4.2e+02 Score=26.77 Aligned_cols=88 Identities=13% Similarity=0.046 Sum_probs=56.7
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCC-cEEE---EcCChhhHHHhhcc
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGL-RLHF---VEDRLATLKNVIKE 225 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~-~~l~---VGDs~~Di~aA~~~ 225 (263)
++|-++.|.+-+--..-+-.++ +..+ +|+|..+. -|-+ ++++.+..+|. ++|| |||+..|+-.|
T Consensus 541 ~RgDKiIVFsDnvfALk~YAik----l~Kp--fIYG~Tsq--~ERm-~ILqnFq~n~~vNTIFlSKVgDtSiDLPEA--- 608 (776)
T KOG1123|consen 541 RRGDKIIVFSDNVFALKEYAIK----LGKP--FIYGPTSQ--NERM-KILQNFQTNPKVNTIFLSKVGDTSIDLPEA--- 608 (776)
T ss_pred hcCCeEEEEeccHHHHHHHHHH----cCCc--eEECCCch--hHHH-HHHHhcccCCccceEEEeeccCccccCCcc---
Confidence 7899999988765444444443 4444 59997632 2222 45666666665 8887 69999999654
Q ss_pred CcCCCCcEEEEcCCCCChHHHHhhhhHhH
Q 024758 226 PELDGWNLYLGNLFRFLCHILLLYLYAVA 254 (263)
Q Consensus 226 ~~~Agi~~v~v~wGy~~~~~l~~~~~~~~ 254 (263)
.+ .|-.+--||++-.-.++||-.-
T Consensus 609 ----nv-LIQISSH~GSRRQEAQRLGRIL 632 (776)
T KOG1123|consen 609 ----NV-LIQISSHGGSRRQEAQRLGRIL 632 (776)
T ss_pred ----cE-EEEEcccccchHHHHHHHHHHH
Confidence 33 3455555577777777887653
No 328
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=31.48 E-value=82 Score=26.11 Aligned_cols=91 Identities=15% Similarity=0.012 Sum_probs=49.8
Q ss_pred hCCCcEEEEcCCchHH-HHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhh---CCCCCCcEEEEcCChhhHHHhhcc
Q 024758 150 LASSRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKK---PEHQGLRLHFVEDRLATLKNVIKE 225 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~-a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~---l~~~~~~~l~VGDs~~Di~aA~~~ 225 (263)
..+-++++++....-. +..+-+ .+|+.-.+ ..+ ..++-+..++++ -|++ ++||++.. ...|++
T Consensus 75 ~~~~~Iavv~~~~~~~~~~~~~~-ll~~~i~~-~~~-----~~~~e~~~~i~~~~~~G~~----viVGg~~~-~~~A~~- 141 (176)
T PF06506_consen 75 KYGPKIAVVGYPNIIPGLESIEE-LLGVDIKI-YPY-----DSEEEIEAAIKQAKAEGVD----VIVGGGVV-CRLARK- 141 (176)
T ss_dssp CCTSEEEEEEESS-SCCHHHHHH-HHT-EEEE-EEE-----SSHHHHHHHHHHHHHTT------EEEESHHH-HHHHHH-
T ss_pred hcCCcEEEEecccccHHHHHHHH-HhCCceEE-EEE-----CCHHHHHHHHHHHHHcCCc----EEECCHHH-HHHHHH-
Confidence 5667899999655544 444545 46663211 122 124444444444 4666 89999975 677776
Q ss_pred CcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhh
Q 024758 226 PELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKM 259 (263)
Q Consensus 226 ~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~ 259 (263)
.|++++.+.-|. +.+..+ -+|..+++.+
T Consensus 142 ---~gl~~v~i~sg~---esi~~Al~eA~~i~~~~ 170 (176)
T PF06506_consen 142 ---LGLPGVLIESGE---ESIRRALEEALRIARAR 170 (176)
T ss_dssp ---TTSEEEESS--H---HHHHHHHHHHHHHHHHH
T ss_pred ---cCCcEEEEEecH---HHHHHHHHHHHHHHHHH
Confidence 899999986664 333333 3455555443
No 329
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=30.02 E-value=1.7e+02 Score=24.79 Aligned_cols=84 Identities=19% Similarity=0.113 Sum_probs=45.8
Q ss_pred chHHHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc--cCcCCCCcEEEEcC
Q 024758 162 QSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK--EPELDGWNLYLGNL 238 (263)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~--~~~~Agi~~v~v~w 238 (263)
+.+.++.+-+. +|+... .+-...+. ..-+.+..+++++....-+.+..||...|.+..+. .+..+|+.++.=.|
T Consensus 46 ~~e~~~~~A~~-lgipl~--~i~~~~~~e~~~~~l~~~l~~~~~~g~~~vv~G~i~sd~~~~~~e~~~~~~gl~~~~PLW 122 (194)
T cd01994 46 NHELLELQAEA-MGIPLI--RIEISGEEEDEVEDLKELLRKLKEEGVDAVVFGAILSEYQRTRVERVCERLGLEPLAPLW 122 (194)
T ss_pred CHHHHHHHHHH-cCCcEE--EEeCCCCchHHHHHHHHHHHHHHHcCCCEEEECccccHHHHHHHHHHHHHcCCEEEeccc
Confidence 34567777774 888532 22111111 11233334444433223468999999877654321 12238999999999
Q ss_pred CCCChHHHHhh
Q 024758 239 FRFLCHILLLY 249 (263)
Q Consensus 239 Gy~~~~~l~~~ 249 (263)
+.. ++++.+-
T Consensus 123 ~~~-~~~ll~e 132 (194)
T cd01994 123 GRD-QEELLRE 132 (194)
T ss_pred CCC-HHHHHHH
Confidence 965 4445433
No 330
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=29.88 E-value=80 Score=22.24 Aligned_cols=30 Identities=20% Similarity=-0.031 Sum_probs=20.2
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHh
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVR 31 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~ 31 (263)
|...|+||=|+.-+||+.- .-++..+.+.+
T Consensus 23 ~es~iiFDNded~tdSa~l-lp~ie~a~~~~ 52 (65)
T PF06117_consen 23 CESDIIFDNDEDKTDSAAL-LPAIEQARADV 52 (65)
T ss_pred CCCCeeecCCCcccchHHH-HHHHHHHHHHH
Confidence 3467999999999999863 33444443333
No 331
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=29.72 E-value=58 Score=25.87 Aligned_cols=87 Identities=11% Similarity=0.062 Sum_probs=45.8
Q ss_pred hCCCcEEEEcCCchHH-HHHHHHH---hhCCCCC-CceEEcCCC---------CCcHHHHHHHHhhCCCCCCcEEEE---
Q 024758 150 LASSRIYIVTSNQSRF-VETLLRE---LAGVTIT-PDRLYGLGT---------GPKVNVLKQLQKKPEHQGLRLHFV--- 212 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~-a~~iL~~---~~gl~~~-f~~v~G~~~---------~pkp~~l~~~l~~l~~~~~~~l~V--- 212 (263)
++|.++.++=|-.... +..+..+ .+++... +..+...+. ...+.....+++.+...|.+++++
T Consensus 33 ~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gDvli~iS~ 112 (138)
T PF13580_consen 33 RNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALNDDALTAISNDLEYDEGFARQLLALYDIRPGDVLIVISN 112 (138)
T ss_dssp HTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTSTHHHHHHHHTTGGGTHHHHHHHHTT--TT-EEEEEES
T ss_pred HCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCcccccccccccchHhhhhcccchhhHHHHHHHHHcCCCCCCEEEEECC
Confidence 6777777776654432 2222222 1333333 233333221 133445566677777888888887
Q ss_pred -cCChhhHHHhhccCcCCCCcEEEEc
Q 024758 213 -EDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 213 -GDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
|-+++=+++++. |+..|+++|++|
T Consensus 113 SG~s~~vi~a~~~-Ak~~G~~vIalT 137 (138)
T PF13580_consen 113 SGNSPNVIEAAEE-AKERGMKVIALT 137 (138)
T ss_dssp SS-SHHHHHHHHH-HHHTT-EEEEEE
T ss_pred CCCCHHHHHHHHH-HHHCCCEEEEEe
Confidence 778887777764 566999999986
No 332
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=29.57 E-value=2.5e+02 Score=26.94 Aligned_cols=39 Identities=26% Similarity=0.277 Sum_probs=29.1
Q ss_pred CCCcccHHHHHH---hCCCcEEEE-cCC----chHHHHHHHHHhhCCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIV-TSN----QSRFVETLLRELAGVTI 178 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~-TnK----~~~~a~~iL~~~~gl~~ 178 (263)
.-.||.+.++|+ +.|++++|. ||- ..+.++++++ +|++.
T Consensus 85 pl~~~~l~eLl~~lk~~gi~taI~~TnG~~l~~~e~~~~L~~--~gld~ 131 (404)
T TIGR03278 85 VSCYPELEELTKGLSDLGLPIHLGYTSGKGFDDPEIAEFLID--NGVRE 131 (404)
T ss_pred cccCHHHHHHHHHHHhCCCCEEEeCCCCcccCCHHHHHHHHH--cCCCE
Confidence 347899999999 679999996 883 4566777766 56653
No 333
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=28.98 E-value=30 Score=25.38 Aligned_cols=15 Identities=33% Similarity=0.357 Sum_probs=12.5
Q ss_pred EEEEecCcccccCHH
Q 024758 4 LYALDFDGVICDSCE 18 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (263)
.++++=|||.||+-.
T Consensus 42 ~lvL~eDGTeVddEe 56 (78)
T cd01615 42 TLVLEEDGTEVDDEE 56 (78)
T ss_pred EEEEeCCCcEEccHH
Confidence 478899999999854
No 334
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=28.63 E-value=61 Score=22.93 Aligned_cols=24 Identities=8% Similarity=-0.100 Sum_probs=16.4
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChh
Q 024758 194 VLKQLQKKPEHQGLRLHFVEDRLA 217 (263)
Q Consensus 194 ~l~~~l~~l~~~~~~~l~VGDs~~ 217 (263)
.+.++|++.|+.+.++|.|||-..
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig~~eF 67 (69)
T PF09269_consen 44 GVEKALRKAGAKEGDTVRIGDYEF 67 (69)
T ss_dssp THHHHHHTTT--TT-EEEETTEEE
T ss_pred CHHHHHHHcCCCCCCEEEEcCEEE
Confidence 356778889999999999998543
No 335
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=28.24 E-value=64 Score=27.87 Aligned_cols=49 Identities=16% Similarity=-0.011 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhCCC---CCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024758 164 RFVETLLRELAGVT---ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (263)
Q Consensus 164 ~~a~~iL~~~~gl~---~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 216 (263)
..++.+|++ .+.. .-|-..+|.|. .+-+++ .+++.+. ...-.+.||...
T Consensus 168 ~av~~ll~~-~~~~~~~~~~~l~~GDD~-tDE~~f-~~~~~~~-~~~~~i~V~~~~ 219 (235)
T PF02358_consen 168 SAVRRLLEE-LPFAGPKPDFVLYIGDDR-TDEDAF-RALRELE-EGGFGIKVGSVS 219 (235)
T ss_dssp HHHHHHHTT-S---------EEEEESSH-HHHHHH-HTTTTS-----EEEEES---
T ss_pred HHHHHHHHh-cCccccccceeEEecCCC-CCHHHH-HHHHhcc-cCCCCeEEEeec
Confidence 466778874 6553 33555567652 233333 3344431 223347788764
No 336
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=28.23 E-value=32 Score=25.44 Aligned_cols=15 Identities=33% Similarity=0.417 Sum_probs=12.6
Q ss_pred EEEEecCcccccCHH
Q 024758 4 LYALDFDGVICDSCE 18 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (263)
.++++=|||.|||-.
T Consensus 41 ~lvLeeDGT~Vd~Ee 55 (81)
T cd06537 41 TLVLEEDGTAVDSED 55 (81)
T ss_pred EEEEecCCCEEccHH
Confidence 578899999999854
No 337
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=27.72 E-value=33 Score=24.93 Aligned_cols=15 Identities=40% Similarity=0.505 Sum_probs=12.2
Q ss_pred EEEEecCcccccCHH
Q 024758 4 LYALDFDGVICDSCE 18 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (263)
.+.++=|||.||+-.
T Consensus 40 ~l~L~eDGT~VddEe 54 (74)
T smart00266 40 TLVLEEDGTIVDDEE 54 (74)
T ss_pred EEEEecCCcEEccHH
Confidence 467899999999854
No 338
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=27.43 E-value=34 Score=25.11 Aligned_cols=15 Identities=33% Similarity=0.507 Sum_probs=12.5
Q ss_pred EEEEecCcccccCHH
Q 024758 4 LYALDFDGVICDSCE 18 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (263)
.++++=|||.|||-.
T Consensus 42 ~lvL~eDGT~Vd~Ee 56 (78)
T cd06539 42 TLVLEEDGTVVDTEE 56 (78)
T ss_pred EEEEeCCCCEEccHH
Confidence 477899999999854
No 339
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=26.48 E-value=4.2e+02 Score=22.82 Aligned_cols=83 Identities=13% Similarity=0.046 Sum_probs=44.3
Q ss_pred chHHHHHHHHHhhCCCCCCceEEcCCCCC-cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc--cCcCCCCcEEEEcC
Q 024758 162 QSRFVETLLRELAGVTITPDRLYGLGTGP-KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK--EPELDGWNLYLGNL 238 (263)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G~~~~p-kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~--~~~~Agi~~v~v~w 238 (263)
..+.++.+-+. +|+... .+--....+ ..+.+..+++++....-+.+..||-..|.+..+. .....|+.++.=.|
T Consensus 44 ~~~~~~~~A~~-lgip~~--~i~~~~~~~~~~~~l~~~l~~~~~~g~~~vv~G~i~sd~~~~~~e~v~~~~gl~~~~PLw 120 (218)
T TIGR03679 44 NIELTRLQAEA-LGIPLV--KIETSGEKEKEVEDLKGALKELKREGVEGIVTGAIASRYQKSRIERICEELGLKVFAPLW 120 (218)
T ss_pred CHHHHHHHHHH-hCCCEE--EEECCCCChHHHHHHHHHHHHHHHcCCCEEEECCcccHhHHHHHHHHHHhCCCeEEeehh
Confidence 34567777774 888532 121111111 1122444444332223458899998766432211 11238999999999
Q ss_pred CCCChHHHH
Q 024758 239 FRFLCHILL 247 (263)
Q Consensus 239 Gy~~~~~l~ 247 (263)
|....+-+.
T Consensus 121 ~~~~~el~~ 129 (218)
T TIGR03679 121 GRDQEEYLR 129 (218)
T ss_pred cCCHHHHHH
Confidence 976555443
No 340
>PRK00087 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed
Probab=26.47 E-value=1.7e+02 Score=29.85 Aligned_cols=83 Identities=13% Similarity=0.025 Sum_probs=59.8
Q ss_pred cEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 154 ~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
.++-+|...+..++.+.++ ..+ =.|+|+..-++..-+.+++++.|. ++++|. +..|+..-. ..|..+
T Consensus 188 tiC~at~~Rq~a~~~la~~-~d~----~~vvGg~~SsNt~~L~~i~~~~~~---~~~~ie-~~~el~~~~----~~~~~~ 254 (647)
T PRK00087 188 TICNATEVRQEAAEKLAKK-VDV----MIVVGGKNSSNTTKLYEICKSNCT---NTIHIE-NAGELPEEW----FKGVKI 254 (647)
T ss_pred CcchhhhhHHHHHHHHHhh-CCE----EEEECCCCCccHHHHHHHHHHHCC---CEEEEC-ChHHCCHHH----hCCCCE
Confidence 4677888888888888764 322 246676544677778888887763 368884 557886543 378899
Q ss_pred EEEcCCCCChHHHHhh
Q 024758 234 YLGNLFRFLCHILLLY 249 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~ 249 (263)
||+|=|..+++.+.+.
T Consensus 255 vgitagaStP~~~i~~ 270 (647)
T PRK00087 255 IGVTAGASTPDWIIEE 270 (647)
T ss_pred EEEEeccCCCHHHHHH
Confidence 9999999999988543
No 341
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=26.09 E-value=37 Score=25.09 Aligned_cols=15 Identities=27% Similarity=0.375 Sum_probs=12.3
Q ss_pred EEEEecCcccccCHH
Q 024758 4 LYALDFDGVICDSCE 18 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (263)
.|+++=|||.||+-.
T Consensus 44 ~lvL~eDGT~VddEe 58 (80)
T cd06536 44 TLVLAEDGTIVEDED 58 (80)
T ss_pred EEEEecCCcEEccHH
Confidence 467899999999854
No 342
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=26.08 E-value=2.4e+02 Score=25.39 Aligned_cols=73 Identities=23% Similarity=0.341 Sum_probs=46.2
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhcc--ccCCCCccc---HHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCC---CCc
Q 024758 110 ENREALIELSGKVRDEWMDTDFTTW--IGANRLYPG---VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTI---TPD 181 (263)
Q Consensus 110 ~~~~~~~~~~~~~r~~y~~~~~~~~--~~~~~lypG---v~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~---~f~ 181 (263)
+.++++++......+.|. .+.+ ...+.--|| .+|+|++.|+|..|+|--+..-.+.-|+. .|+.. .-|
T Consensus 43 m~pe~~~~~~~~~~~~~~---pDf~i~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K~~d~l~~-~g~GYIivk~D 118 (277)
T PRK00994 43 MGPEEVEEVVKKMLEEWK---PDFVIVISPNPAAPGPKKAREILKAAGIPCIVIGDAPGKKVKDAMEE-QGLGYIIVKAD 118 (277)
T ss_pred CCHHHHHHHHHHHHHhhC---CCEEEEECCCCCCCCchHHHHHHHhcCCCEEEEcCCCccchHHHHHh-cCCcEEEEecC
Confidence 345555555555544442 2222 222233444 78899899999999999888888889996 88852 124
Q ss_pred eEEcC
Q 024758 182 RLYGL 186 (263)
Q Consensus 182 ~v~G~ 186 (263)
..+|.
T Consensus 119 pMIGA 123 (277)
T PRK00994 119 PMIGA 123 (277)
T ss_pred ccccc
Confidence 45554
No 343
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=25.92 E-value=36 Score=24.95 Aligned_cols=15 Identities=33% Similarity=0.337 Sum_probs=11.8
Q ss_pred EEEEecCcccccCHH
Q 024758 4 LYALDFDGVICDSCE 18 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (263)
.++++=|||.||+-.
T Consensus 42 ~lvL~eDGT~VddEe 56 (78)
T PF02017_consen 42 RLVLEEDGTEVDDEE 56 (78)
T ss_dssp EEEETTTTCBESSCH
T ss_pred EEEEeCCCcEEccHH
Confidence 367789999999743
No 344
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=25.71 E-value=1.2e+02 Score=32.78 Aligned_cols=56 Identities=18% Similarity=0.172 Sum_probs=42.5
Q ss_pred chHHHHHHHHHhhCCCCCCceEEcCC-C-------C-CcHHHHHHHHhhCCCCCCcE-EEEcCChh-hHH
Q 024758 162 QSRFVETLLRELAGVTITPDRLYGLG-T-------G-PKVNVLKQLQKKPEHQGLRL-HFVEDRLA-TLK 220 (263)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G~~-~-------~-pkp~~l~~~l~~l~~~~~~~-l~VGDs~~-Di~ 220 (263)
+-..+++.|.. .|+.. ..|++.. . . .|...++.+..++|++.+++ +|+|||-+ |.+
T Consensus 922 ~v~elr~~Lr~-~gLr~--~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e 988 (1050)
T TIGR02468 922 PVKELRKLLRI-QGLRC--HAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYE 988 (1050)
T ss_pred cHHHHHHHHHh-CCCce--EEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHH
Confidence 34677888885 78864 3455543 1 1 68999999999999999999 66999999 844
No 345
>cd00452 KDPG_aldolase KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.
Probab=25.43 E-value=3.9e+02 Score=22.23 Aligned_cols=67 Identities=12% Similarity=0.061 Sum_probs=34.8
Q ss_pred CcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEc-CChhhHHHhhccCcCCCC
Q 024758 153 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE-DRLATLKNVIKEPELDGW 231 (263)
Q Consensus 153 ~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VG-Ds~~Di~aA~~~~~~Agi 231 (263)
..++.-|.-....++..++ .|- +.|.... ..++.+. +.+.++.. +++| .|..++..|.+ +|+
T Consensus 56 ~~iGag~v~~~~~~~~a~~--~Ga----~~i~~p~--~~~~~~~-~~~~~~~~----~i~gv~t~~e~~~A~~----~Ga 118 (190)
T cd00452 56 ALIGAGTVLTPEQADAAIA--AGA----QFIVSPG--LDPEVVK-AANRAGIP----LLPGVATPTEIMQALE----LGA 118 (190)
T ss_pred CEEEEEeCCCHHHHHHHHH--cCC----CEEEcCC--CCHHHHH-HHHHcCCc----EECCcCCHHHHHHHHH----CCC
Confidence 4444445544444544444 333 2333221 2344443 34455554 4444 36677777765 899
Q ss_pred cEEEE
Q 024758 232 NLYLG 236 (263)
Q Consensus 232 ~~v~v 236 (263)
+.+++
T Consensus 119 d~i~~ 123 (190)
T cd00452 119 DIVKL 123 (190)
T ss_pred CEEEE
Confidence 99987
No 346
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=25.32 E-value=4.7e+02 Score=23.00 Aligned_cols=96 Identities=11% Similarity=0.100 Sum_probs=54.8
Q ss_pred ccHHHHHH--hCC--CcEEEEc-CCch----HHHHHHHHHhhCCCCCCceEEc-CCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 142 PGVSDALK--LAS--SRIYIVT-SNQS----RFVETLLRELAGVTITPDRLYG-LGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 142 pGv~e~L~--~~g--~~laI~T-nK~~----~~a~~iL~~~~gl~~~f~~v~G-~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
||+.|+|. +.| -++.|.+ +... ..+..+-.++.|-. +++ -+...+.....+++..++....-=++
T Consensus 27 p~~aEfISAlAAG~nAkliVe~~s~g~~~~ttiaLaaAAr~TgGR-----~vCIvp~~~~~~~~~~~l~~~~~~~~vEfv 101 (218)
T PF07279_consen 27 PGVAEFISALAAGWNAKLIVEAWSSGGAISTTIALAAAARQTGGR-----HVCIVPDEQSLSEYKKALGEAGLSDVVEFV 101 (218)
T ss_pred CCHHHHHHHHhccccceEEEEEecCCCchHhHHHHHHHHHhcCCe-----EEEEcCChhhHHHHHHHHhhccccccceEE
Confidence 89999999 444 4555544 3321 22222333224432 222 11112334556666666665221267
Q ss_pred EcCChhhHHHhhccCcCCCCcEEEEcCCCCChH-HHH
Q 024758 212 VEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH-ILL 247 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~-~l~ 247 (263)
|||+..++..-. .|++++.|.+-..+.. +++
T Consensus 102 vg~~~e~~~~~~-----~~iDF~vVDc~~~d~~~~vl 133 (218)
T PF07279_consen 102 VGEAPEEVMPGL-----KGIDFVVVDCKREDFAARVL 133 (218)
T ss_pred ecCCHHHHHhhc-----cCCCEEEEeCCchhHHHHHH
Confidence 899998887554 6999999999865555 443
No 347
>COG4825 Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown]
Probab=25.26 E-value=4e+02 Score=24.80 Aligned_cols=84 Identities=15% Similarity=0.095 Sum_probs=52.7
Q ss_pred ccHHHHHH-hCCCcEEEEcCCc-hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhH
Q 024758 142 PGVSDALK-LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (263)
Q Consensus 142 pGv~e~L~-~~g~~laI~TnK~-~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 219 (263)
|||+++-. -+|.++.|++--+ .+.-.+.|+. + |..|-...+|-+- --..+.+.|..|+ +.|||-..=-
T Consensus 169 ~gIPD~~n~~~gR~VlIva~~~~~~~dLk~lk~-f-i~ey~pvlIgVdG------aAD~l~~~GykP~--lIvGdp~~i~ 238 (395)
T COG4825 169 IGIPDLDNDLRGRHVLIVADEPSFEDDLKSLKP-F-IKEYQPVLIGVDG------AADVLRKAGYKPQ--LIVGDPDQIS 238 (395)
T ss_pred CCCCcccchhcccEEEEEeCCCChHhHHHHHHH-H-HHhhCCEEEEccc------hHHHHHHcCCCcc--eeecCcchhh
Confidence 77777766 5777888887533 3333445554 3 6677777777552 1234556788888 8899865544
Q ss_pred HHhhccCcCCCCcEEEEcCC
Q 024758 220 KNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 220 ~aA~~~~~~Agi~~v~v~wG 239 (263)
..|-+ +|.+.+.-.+-
T Consensus 239 ~~aLR----~ga~vvlpad~ 254 (395)
T COG4825 239 TEALR----CGAKVVLPADA 254 (395)
T ss_pred HHHHh----cccceeeccCC
Confidence 44444 67777665543
No 348
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=25.18 E-value=1.9e+02 Score=25.00 Aligned_cols=62 Identities=16% Similarity=-0.047 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHHHHHHHHhhhh--hccccCCCCccc-HHHHHH---hCCCcEEEEcCC--chHHHHHHHH
Q 024758 110 ENREALIELSGKVRDEWMDTDF--TTWIGANRLYPG-VSDALK---LASSRIYIVTSN--QSRFVETLLR 171 (263)
Q Consensus 110 ~~~~~~~~~~~~~r~~y~~~~~--~~~~~~~~lypG-v~e~L~---~~g~~laI~TnK--~~~~a~~iL~ 171 (263)
++++++-+...+.+..|..... ..-.....++|. +.++++ ++|+.++|.||- +.+..+.++.
T Consensus 19 ~t~eel~~~~~~~~~f~~~sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~ 88 (213)
T PRK10076 19 ITLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAK 88 (213)
T ss_pred cCHHHHHHHHHhhhHhhcCCCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHH
Confidence 3455555555555555532100 000122345666 678888 899999999997 5556666665
No 349
>PF08303 tRNA_lig_kinase: tRNA ligase kinase domain; InterPro: IPR015966 This entry represents a kinase domain found in fungal tRNA ligases []. Please see the following relevant references: [, ].; GO: 0003972 RNA ligase (ATP) activity, 0005524 ATP binding, 0006388 tRNA splicing, via endonucleolytic cleavage and ligation
Probab=25.11 E-value=3.2e+02 Score=23.05 Aligned_cols=81 Identities=19% Similarity=0.039 Sum_probs=46.7
Q ss_pred EEc-CCchHHHHHHHHHhhC-CCCCCceEEcCC-C-CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc--------
Q 024758 157 IVT-SNQSRFVETLLRELAG-VTITPDRLYGLG-T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK-------- 224 (263)
Q Consensus 157 I~T-nK~~~~a~~iL~~~~g-l~~~f~~v~G~~-~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~-------- 224 (263)
|+| +.....+-..|.+.|| |.+ |...+ . +.+|..+..+++.|.-....++ |=|+-|-....|+
T Consensus 5 IAtiGCGKTTva~aL~~LFg~wgH----vQnDnI~~k~~~~f~~~~l~~L~~~~~~vV-iaDRNNh~~reR~ql~~~~~~ 79 (168)
T PF08303_consen 5 IATIGCGKTTVALALSNLFGEWGH----VQNDNITGKRKPKFIKAVLELLAKDTHPVV-IADRNNHQKRERKQLFEDVSQ 79 (168)
T ss_pred ecCCCcCHHHHHHHHHHHcCCCCc----cccCCCCCCCHHHHHHHHHHHHhhCCCCEE-EEeCCCchHHHHHHHHHHHHH
Confidence 444 3444445556665677 643 43333 1 2567777788887733333444 5587776655543
Q ss_pred -----cCcCCCCcEEEEcCCCCC
Q 024758 225 -----EPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 225 -----~~~~Agi~~v~v~wGy~~ 242 (263)
.+..-++++|++.|-...
T Consensus 80 ~~~~yl~~~~~~r~VaL~fv~~~ 102 (168)
T PF08303_consen 80 LKPDYLPYDTNVRFVALNFVHDD 102 (168)
T ss_pred hcccccccCCCeEEEEEEccCCC
Confidence 011238999999998655
No 350
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=24.69 E-value=37 Score=31.86 Aligned_cols=16 Identities=13% Similarity=0.356 Sum_probs=13.3
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
+++-||+|.||+-=-.
T Consensus 13 ~~~GFDmDyTLa~Y~~ 28 (343)
T TIGR02244 13 QVFGFDMDYTLAQYKS 28 (343)
T ss_pred CEEEECccccccccCh
Confidence 7899999999996443
No 351
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.01 E-value=41 Score=33.19 Aligned_cols=52 Identities=8% Similarity=-0.006 Sum_probs=36.4
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhH
Q 024758 193 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYA 252 (263)
Q Consensus 193 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~ 252 (263)
+.+..-|+-+|-.-++++|- .=.+-|++ +|+.++...|=-+.+....+.||.
T Consensus 490 Dt~lmSCRVlgRkvE~~l~~----~~~e~A~~----~gi~tir~~Y~pt~kN~pv~~FyE 541 (574)
T COG3882 490 DTFLMSCRVLGRKVEQRLMN----SLEEQALS----EGINTIRGYYIPTEKNAPVSDFYE 541 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHh----cCcceeeeEecccccCCcHHHHHH
Confidence 55555666677666666651 33455554 899999988888888888888775
No 352
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=23.98 E-value=39 Score=29.35 Aligned_cols=19 Identities=16% Similarity=0.044 Sum_probs=13.9
Q ss_pred cEEEEecCcccccCHHHHH
Q 024758 3 DLYALDFDGVICDSCEETA 21 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~ 21 (263)
+.|-||||||+.----...
T Consensus 59 ~~v~~D~~GT~m~iPYGYL 77 (271)
T PF06901_consen 59 HTVTFDFQGTKMVIPYGYL 77 (271)
T ss_pred eeEEEeccceEEEeechhh
Confidence 6789999999875444433
No 353
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=23.90 E-value=90 Score=22.05 Aligned_cols=23 Identities=9% Similarity=-0.073 Sum_probs=19.1
Q ss_pred HHHHHhhCCCCCCcEEEEcCChh
Q 024758 195 LKQLQKKPEHQGLRLHFVEDRLA 217 (263)
Q Consensus 195 l~~~l~~l~~~~~~~l~VGDs~~ 217 (263)
+.++|++.|+.+.++|.|||-..
T Consensus 45 v~~~L~~~G~~~GD~V~Ig~~eF 67 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIGDFEF 67 (69)
T ss_pred HHHHHHHcCCCCCCEEEEccEEE
Confidence 56788889999999999998544
No 354
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=23.90 E-value=1.7e+02 Score=24.19 Aligned_cols=18 Identities=11% Similarity=0.003 Sum_probs=8.6
Q ss_pred CCCcEEEEcCCCCChHHH
Q 024758 229 DGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 229 Agi~~v~v~wGy~~~~~l 246 (263)
.+.++|.|.-|.-..|.+
T Consensus 98 ~~pdiv~vglG~PkQE~~ 115 (171)
T cd06533 98 SGADILFVGLGAPKQELW 115 (171)
T ss_pred cCCCEEEEECCCCHHHHH
Confidence 455555555554433333
No 355
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=23.54 E-value=5.1e+02 Score=25.44 Aligned_cols=59 Identities=5% Similarity=-0.191 Sum_probs=35.2
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcC-------CCCChHHHHhhhhHhHHHhhh
Q 024758 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNL-------FRFLCHILLLYLYAVALFAKM 259 (263)
Q Consensus 191 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~w-------Gy~~~~~l~~~~~~~~~~~~~ 259 (263)
+..-+.+.+++.+ |+ ++||++ +.-..|++ .|++++-++. +++.. -...+-|+..+++.+
T Consensus 352 D~~ei~~~i~~~~--pd--liiG~~-~er~~a~~----lgip~~~i~~Pv~~~~~~~~~~-p~~Gy~Ga~~l~~~i 417 (511)
T TIGR01278 352 DFQEVADAIAALE--PE--LVLGTQ-MERHSAKR----LDIPCGVISAPTHIQNFPLGYR-PFLGFEGANVMADTV 417 (511)
T ss_pred CHHHHHHHHHhcC--CC--EEEECh-HHHHHHHH----cCCCEEEecCcchhhcccccCC-CccchHHHHHHHHHH
Confidence 3445555666554 44 889998 45455665 7999987743 22222 355566666666543
No 356
>TIGR03599 YloV DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.
Probab=23.47 E-value=4.9e+02 Score=25.94 Aligned_cols=93 Identities=15% Similarity=0.149 Sum_probs=65.5
Q ss_pred CcEEEEcCCchHHHHHHHHHhhCCCCCCceEE-cCCC-CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCC
Q 024758 153 SRIYIVTSNQSRFVETLLRELAGVTITPDRLY-GLGT-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 153 ~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~-G~~~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
.+.+|++=.+.+-...+++. +|.+ .|+ |+.+ .|..+=+..++++ ++..+++..=...+=+.+|+++++..+
T Consensus 313 ~~~~ivAv~~g~g~~~~f~~-~Ga~----~vi~ggqt~nPS~~dll~ai~~--~~a~~V~iLPNn~nii~aA~qa~~~~~ 385 (530)
T TIGR03599 313 KEYAIVAVAPGEGIAELFKS-LGAD----VVIEGGQTMNPSTEDILKAIEK--VNAKNVFVLPNNKNIILAAEQAAELAD 385 (530)
T ss_pred CCeEEEEEcCCchHHHHHHH-CCCC----EEEeCCCCCCCCHHHHHHHHHh--CCCCeEEEecCCccHHHHHHHHHHHhC
Confidence 34667776666667778886 8874 444 5544 5888878888774 456678888888888999988776777
Q ss_pred CcEEEEcCCCCChHHHHhhhhHhHHHh
Q 024758 231 WNLYLGNLFRFLCHILLLYLYAVALFA 257 (263)
Q Consensus 231 i~~v~v~wGy~~~~~l~~~~~~~~~~~ 257 (263)
.+++-|..- .+.+++.|.++|+
T Consensus 386 ~~v~vvpT~-----s~~qgiaAl~~fd 407 (530)
T TIGR03599 386 KNVVVIPTK-----TIVQGLAALLVFD 407 (530)
T ss_pred CcEEEEeCC-----CHHHHHHHHHhhC
Confidence 777776433 3566788887775
No 357
>PRK08304 stage V sporulation protein AD; Validated
Probab=23.22 E-value=81 Score=29.56 Aligned_cols=62 Identities=13% Similarity=0.024 Sum_probs=38.3
Q ss_pred CCCCCceEEcCCC-C----Cc------HHHHHHHHhhCCCCCC--cEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 176 VTITPDRLYGLGT-G----PK------VNVLKQLQKKPEHQGL--RLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 176 l~~~f~~v~G~~~-~----pk------p~~l~~~l~~l~~~~~--~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
|..+||.++-... + .+ -+.+++++++.|++++ +.+++||..+-+..+.-.++..|+++..|.
T Consensus 34 l~~~fd~~~~d~~~Ge~swEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIPa~dV~ 108 (337)
T PRK08304 34 LGKYFDKILDDDYCGEKSWEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIPFLGLY 108 (337)
T ss_pred ChhhCCeEecccccCCcCccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCcEEEEe
Confidence 5678998886441 1 12 2456677888898876 789999975433222222233688776664
No 358
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=22.71 E-value=2.2e+02 Score=26.04 Aligned_cols=72 Identities=11% Similarity=0.032 Sum_probs=44.4
Q ss_pred HHHHHHHHhhCCCCCCceEEcC--CCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE-cCCC
Q 024758 165 FVETLLRELAGVTITPDRLYGL--GTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG-NLFR 240 (263)
Q Consensus 165 ~a~~iL~~~~gl~~~f~~v~G~--~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v-~wGy 240 (263)
.-.-+.++ +|+.... +++. +..|.|.-+.++.+...-..-.|||++-..+. ..++..++..|++.+.. ..|.
T Consensus 212 af~Yf~~~-ygl~~~~--~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-~~~~~la~e~g~~v~~ldpl~~ 286 (311)
T PRK09545 212 AYGYFEKH-YGLTPLG--HFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRP-AVIESVAKGTSVRMGTLDPLGT 286 (311)
T ss_pred hHHHHHHh-CCCceee--eeccCCCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCh-HHHHHHHHhcCCeEEEeccccc
Confidence 33456665 8987432 3342 23488988888877766666678888765443 44444455688887554 3443
No 359
>TIGR01282 nifD nitrogenase molybdenum-iron protein alpha chain. Nitrogenase consists of alpha (NifD) and beta (NifK) subunits of the molybdenum-iron protein and an ATP-binding iron-sulfur protein (NifH). This model describes a large clade of NifD proteins, but excludes a lineage that contains putative NifD and NifD homologs from species with vanadium-dependent nitrogenases.
Probab=22.01 E-value=7.4e+02 Score=24.08 Aligned_cols=97 Identities=9% Similarity=-0.158 Sum_probs=51.9
Q ss_pred HHHhCCCcEEEEcCC--chHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 147 ALKLASSRIYIVTSN--QSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 147 ~L~~~g~~laI~TnK--~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
+|++-|+.+..++++ ........++. ++- +.++-. .+++.-+.+.+++.+.+ ++||-+.. -..|++
T Consensus 353 ~l~ELGmevv~~g~~~~~~~~~~~~~~~-~~~----~~~i~~--~~d~~el~~~i~~~~pD----l~ig~~~~-~~~a~k 420 (466)
T TIGR01282 353 AFEDLGMEVIGTGYEFAHNDDYERTTKY-MKD----GTLIYD--DVTHYEFEEFVEKLKPD----LVGSGIKE-KYVFQK 420 (466)
T ss_pred HHHHCCCEEEEEeeecCCHHHHHHHHHh-cCC----CeEEee--CCCHHHHHHHHHHhCCC----EEEecCCc-cceeee
Confidence 333677777655442 23333344443 321 222211 15566677777776655 99999854 445555
Q ss_pred cCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhc
Q 024758 225 EPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMD 260 (263)
Q Consensus 225 ~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~ 260 (263)
.||+++-+. .+....-...+-|++.+++.+.
T Consensus 421 ----~gIP~~~~~-~~~~~~~~~Gy~G~~~l~~~i~ 451 (466)
T TIGR01282 421 ----MGVPFRQMH-SWDYSGPYHGYDGFAIFARDMD 451 (466)
T ss_pred ----cCCCccccc-cccccCcchhHhHHHHHHHHHH
Confidence 899985442 1110223355667777666553
No 360
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=22.01 E-value=2.6e+02 Score=26.10 Aligned_cols=89 Identities=15% Similarity=0.095 Sum_probs=52.5
Q ss_pred CCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC---Cc----HHH---HHHHHhhCCCCC
Q 024758 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---PK----VNV---LKQLQKKPEHQG 206 (263)
Q Consensus 137 ~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~---pk----p~~---l~~~l~~l~~~~ 206 (263)
++.+|-++..-|+++|+.+ ++|......+..+|+. +|++. .++|.... .| +.- +.++++ ...|
T Consensus 12 hvhfFk~~I~eL~~~GheV-~it~R~~~~~~~LL~~-yg~~y---~~iG~~g~~~~~Kl~~~~~R~~~l~~~~~--~~~p 84 (335)
T PF04007_consen 12 HVHFFKNIIRELEKRGHEV-LITARDKDETEELLDL-YGIDY---IVIGKHGDSLYGKLLESIERQYKLLKLIK--KFKP 84 (335)
T ss_pred HHHHHHHHHHHHHhCCCEE-EEEEeccchHHHHHHH-cCCCe---EEEcCCCCCHHHHHHHHHHHHHHHHHHHH--hhCC
Confidence 3467888888888888875 5566666788899995 88853 35665322 11 111 122222 2345
Q ss_pred CcEEEEcCChhh-HHHhhccCcCCCCcEEEEcC
Q 024758 207 LRLHFVEDRLAT-LKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 207 ~~~l~VGDs~~D-i~aA~~~~~~Agi~~v~v~w 238 (263)
+ ++|+=...+ ...|. ..|+++|.+.=
T Consensus 85 D--v~is~~s~~a~~va~----~lgiP~I~f~D 111 (335)
T PF04007_consen 85 D--VAISFGSPEAARVAF----GLGIPSIVFND 111 (335)
T ss_pred C--EEEecCcHHHHHHHH----HhCCCeEEEec
Confidence 4 555433333 33554 38899888764
No 361
>PRK12404 stage V sporulation protein AD; Provisional
Probab=21.83 E-value=41 Score=31.41 Aligned_cols=61 Identities=10% Similarity=-0.101 Sum_probs=37.8
Q ss_pred CCCCCceEEcCCC-----CCc------HHHHHHHHhhCCCCCC--cEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 176 VTITPDRLYGLGT-----GPK------VNVLKQLQKKPEHQGL--RLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 176 l~~~f~~v~G~~~-----~pk------p~~l~~~l~~l~~~~~--~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
|..+||.++-.+. -.+ .+.+..++++.|++++ +.+++||..+-+..+.-.++.-|+++++|
T Consensus 32 l~~~FD~~~~d~~~g~~swEkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipssfvar~LGIP~~gV 105 (334)
T PRK12404 32 LAEDFDLLHEDLWLGQDSYEKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTSFAARTLGIPYLGL 105 (334)
T ss_pred ChhhCCeeecccccCCcchHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHHHHHHHhCCCccce
Confidence 5678998886441 122 2456677888888876 78999997743322221122368887655
No 362
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=21.76 E-value=1.1e+02 Score=27.43 Aligned_cols=15 Identities=33% Similarity=0.403 Sum_probs=12.8
Q ss_pred CCcEEEEecCccccc
Q 024758 1 MEDLYALDFDGVICD 15 (263)
Q Consensus 1 m~~~vlFDlDGTLvD 15 (263)
|..+|+.|+||||++
T Consensus 6 ~~~lIFtDlD~TLl~ 20 (274)
T COG3769 6 MPLLIFTDLDGTLLP 20 (274)
T ss_pred cceEEEEcccCcccC
Confidence 556777799999999
No 363
>PF14544 DUF4443: Domain of unknown function (DUF4443); PDB: 2P8T_A.
Probab=21.67 E-value=95 Score=24.24 Aligned_cols=29 Identities=28% Similarity=0.177 Sum_probs=20.8
Q ss_pred cEEEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 232 NLYLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 232 ~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
++|-++||......+. +++.+|++-|=++
T Consensus 79 D~IIIt~ae~~~~A~k-sa~~~al~~~~~~ 107 (108)
T PF14544_consen 79 DLIIITWAEDPGDAMK-SAYHVALFLKGDE 107 (108)
T ss_dssp -EEEEEE-SSHHHHHH-HHHHHHHHHHGGG
T ss_pred CEEEEEccCCHHHHHH-HHHHHHHHhcccc
Confidence 4678999987666555 8999999877654
No 364
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=21.65 E-value=50 Score=24.31 Aligned_cols=15 Identities=40% Similarity=0.366 Sum_probs=12.4
Q ss_pred EEEEecCcccccCHH
Q 024758 4 LYALDFDGVICDSCE 18 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (263)
.|+++=|||.||+-.
T Consensus 41 ~lvL~eDGT~Vd~Ee 55 (79)
T cd06538 41 SLVLDEDGTGVDTEE 55 (79)
T ss_pred EEEEecCCcEEccHH
Confidence 478899999999854
No 365
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.62 E-value=84 Score=22.31 Aligned_cols=25 Identities=24% Similarity=0.228 Sum_probs=19.5
Q ss_pred HHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 195 LKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 195 l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
+..+++..|.- +|+||+..||+.-+
T Consensus 7 VqQlLK~~G~i----vyfg~r~~~iemm~ 31 (68)
T COG4483 7 VQQLLKKFGII----VYFGKRLYDIEMMQ 31 (68)
T ss_pred HHHHHHHCCee----eecCCHHHHHHHHH
Confidence 35667778874 89999999998765
No 366
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=21.46 E-value=4.6e+02 Score=24.27 Aligned_cols=82 Identities=10% Similarity=0.177 Sum_probs=55.2
Q ss_pred CcccHHH-HHH-hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHH-HHhhCCCCCC--cEEEEc-
Q 024758 140 LYPGVSD-ALK-LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQ-LQKKPEHQGL--RLHFVE- 213 (263)
Q Consensus 140 lypGv~e-~L~-~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~-~l~~l~~~~~--~~l~VG- 213 (263)
.|-.+.. +.+ .....+.|+||--.-.+-...+ .-|+ +-.+|+|+...=+..-++. +-++||+.|+ +.+.||
T Consensus 116 ifK~iip~lv~ySpd~~llvvSNPVDilTYv~wK-LSgf--P~nRViGsGcnLDsaRFryLi~~~Lg~~pss~hgwIiGE 192 (332)
T KOG1495|consen 116 IFKAIIPALVKYSPDCILLVVSNPVDILTYVTWK-LSGF--PKNRVIGSGCNLDSARFRYLIGNRLGVHPSSCHGWIIGE 192 (332)
T ss_pred HHHHHHHHHhhcCCCeEEEEecCchHHHHHHHHH-HcCC--cccceeccCcCccHHHHHHHHHHHhCCCcccceEEEeec
Confidence 3333433 334 7888999999999888888888 4676 4578999876655555555 4567899987 456775
Q ss_pred --CChhhHHHhhc
Q 024758 214 --DRLATLKNVIK 224 (263)
Q Consensus 214 --Ds~~Di~aA~~ 224 (263)
||..-+=.+.+
T Consensus 193 HGdSsV~vWSgvn 205 (332)
T KOG1495|consen 193 HGDSSVPVWSGVN 205 (332)
T ss_pred cCCccceeccccc
Confidence 55554444433
No 367
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=21.15 E-value=2.7e+02 Score=24.68 Aligned_cols=60 Identities=10% Similarity=0.140 Sum_probs=32.5
Q ss_pred CcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhh
Q 024758 140 LYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKK 201 (263)
Q Consensus 140 lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~ 201 (263)
+.-||.+.++++|+.+.++++......+..++. + +....|.++=....++.+-+....+.
T Consensus 19 ii~gIe~~a~~~Gy~l~l~~t~~~~~~e~~i~~-l-~~~~vDGiI~~s~~~~~~~l~~~~~~ 78 (279)
T PF00532_consen 19 IIRGIEQEAREHGYQLLLCNTGDDEEKEEYIEL-L-LQRRVDGIILASSENDDEELRRLIKS 78 (279)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTTHHHHHHHHH-H-HHTTSSEEEEESSSCTCHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCEEEEecCCCchHHHHHHHH-H-HhcCCCEEEEecccCChHHHHHHHHc
Confidence 345666666689999988776555554455553 3 22334554422323333445554544
No 368
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=20.82 E-value=5.5e+02 Score=22.15 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=55.3
Q ss_pred ccHHHHHH----hCCCcEEEEcCCch----HHHHHHHHHhhCCCCCCceEEcCCC---C-----CcHHHHHHHHhhCCCC
Q 024758 142 PGVSDALK----LASSRIYIVTSNQS----RFVETLLRELAGVTITPDRLYGLGT---G-----PKVNVLKQLQKKPEHQ 205 (263)
Q Consensus 142 pGv~e~L~----~~g~~laI~TnK~~----~~a~~iL~~~~gl~~~f~~v~G~~~---~-----pkp~~l~~~l~~l~~~ 205 (263)
..|.++.+ +...-.++.|+..+ ..++++|+. .||. ||.|+=... . =|-..+..+++.+. .
T Consensus 57 e~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s-~~L~--Fd~v~LKp~~~~~~sTm~fK~~~l~~ll~~Y~-~ 132 (197)
T PF10307_consen 57 ENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLAS-KGLE--FDAVCLKPENQRFSSTMDFKQAFLEDLLHTYK-N 132 (197)
T ss_pred HHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhc-CCCC--ccEEEeCcccccCccccHHHHHHHHHHHHhcC-C
Confidence 34666666 56666788898775 556667774 7776 888885332 1 36678888898877 7
Q ss_pred CCcEEEEcCChhhHHHh
Q 024758 206 GLRLHFVEDRLATLKNV 222 (263)
Q Consensus 206 ~~~~l~VGDs~~Di~aA 222 (263)
.+++-+.+|+..-+.+=
T Consensus 133 ~~eI~IYeDR~~hvk~F 149 (197)
T PF10307_consen 133 AEEIRIYEDRPKHVKGF 149 (197)
T ss_pred CCEEEEEcCCHHHHHHH
Confidence 78999999999887653
No 369
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=20.76 E-value=5.3e+02 Score=23.55 Aligned_cols=102 Identities=9% Similarity=-0.066 Sum_probs=53.6
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC---------C--CcHHHHHHHH---
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---------G--PKVNVLKQLQ--- 199 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~---------~--pkp~~l~~~l--- 199 (263)
+.-+.|.+.++++ ++|..+.|+||-.-- .+. +.. +--..++..-+.-|. + ..-+.+.+.+
T Consensus 82 EPLL~pdl~eiv~~~~~~g~~v~l~TNG~ll-~~~-~~~-l~~~~~~~i~VSLDG~~e~hd~~~~~~g~f~~~l~~I~~l 158 (318)
T TIGR03470 82 EPLLHPEIDEIVRGLVARKKFVYLCTNALLL-EKK-LDK-FEPSPYLTFSVHLDGLREHHDASVCREGVFDRAVEAIREA 158 (318)
T ss_pred cccccccHHHHHHHHHHcCCeEEEecCceeh-HHH-HHH-HHhCCCcEEEEEEecCchhhchhhcCCCcHHHHHHHHHHH
Confidence 3446799999998 778999999996532 122 222 211112223332110 1 1112222332
Q ss_pred hhCCCCCC-cEE-EEcCChhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 200 KKPEHQGL-RLH-FVEDRLATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 200 ~~l~~~~~-~~l-~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
++.|+... ++. +-+++..++....+-+...|++.+.+..||.
T Consensus 159 ~~~G~~v~v~~tv~~~~n~~ei~~~~~~~~~lGv~~i~i~p~~~ 202 (318)
T TIGR03470 159 KARGFRVTTNTTLFNDTDPEEVAEFFDYLTDLGVDGMTISPGYA 202 (318)
T ss_pred HHCCCcEEEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCcc
Confidence 23454322 222 3478888887644433447998888876653
No 370
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=20.67 E-value=1.7e+02 Score=24.55 Aligned_cols=39 Identities=13% Similarity=-0.007 Sum_probs=30.0
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 191 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.|+-+..++.+ .+ ++||.+.+-...|-. .|++++++.|.
T Consensus 247 ~~~~~~~~~~~--~~----~~Is~RlH~~I~a~~----~g~P~i~i~y~ 285 (286)
T PF04230_consen 247 SPDELLELISQ--AD----LVISMRLHGAILALS----LGVPVIAISYD 285 (286)
T ss_pred CHHHHHHHHhc--CC----EEEecCCHHHHHHHH----cCCCEEEEecC
Confidence 45555555542 33 889999999999987 99999999885
No 371
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=20.39 E-value=2.1e+02 Score=26.57 Aligned_cols=80 Identities=16% Similarity=0.160 Sum_probs=48.4
Q ss_pred EEEEcCCc--hHHHHHHHHHhhCCCCCCceEEcCCCCCcHH----H---HHHHHhhCCCCCCcEEEEcCChhhHHHhhcc
Q 024758 155 IYIVTSNQ--SRFVETLLRELAGVTITPDRLYGLGTGPKVN----V---LKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (263)
Q Consensus 155 laI~TnK~--~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~----~---l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 225 (263)
..|+|+.. ..+...+.+. |++ ...+.....++.+... . +..++++ ..|+=++..||+..-+.+|..
T Consensus 12 ~li~tG~H~~~~~g~~~~~~-f~i-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Pd~Vlv~GD~~~~la~ala- 86 (346)
T PF02350_consen 12 ILIVTGQHLDPEMGDTFFEG-FGI-PKPDYLLDSDSQSMAKSTGLAIIELADVLER--EKPDAVLVLGDRNEALAAALA- 86 (346)
T ss_dssp EEEEECSS--CHHHHHHHHH-TT---SEEEE--STTS-HHHHHHHHHHHHHHHHHH--HT-SEEEEETTSHHHHHHHHH-
T ss_pred EEEEeCCCCCHHHHHHHHhh-CCC-CCCCcccccccchHHHHHHHHHHHHHHHHHh--cCCCEEEEEcCCchHHHHHHH-
Confidence 46778877 8888888885 999 6677777755432222 2 2233332 478888999999877766653
Q ss_pred CcCCCCcEEEEcCC
Q 024758 226 PELDGWNLYLGNLF 239 (263)
Q Consensus 226 ~~~Agi~~v~v~wG 239 (263)
|...+|+++=+.=|
T Consensus 87 A~~~~ipv~HieaG 100 (346)
T PF02350_consen 87 AFYLNIPVAHIEAG 100 (346)
T ss_dssp HHHTT-EEEEES--
T ss_pred HHHhCCCEEEecCC
Confidence 44589999888877
No 372
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=20.27 E-value=2.1e+02 Score=25.43 Aligned_cols=83 Identities=24% Similarity=0.182 Sum_probs=41.5
Q ss_pred cEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEc--CChh------hHHHhhcc
Q 024758 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE--DRLA------TLKNVIKE 225 (263)
Q Consensus 154 ~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VG--Ds~~------Di~aA~~~ 225 (263)
+.--+| ..+....+++. ..-..+--+++|+. |+.+.++.+.+...- +.-.+| |... .+....+
T Consensus 84 ~~~Rv~--G~dl~~~ll~~-~~~~~~~v~llG~~----~~v~~~a~~~l~~~y-~l~i~g~~~Gyf~~~e~~~i~~~I~- 154 (243)
T PRK03692 84 QVSRVA--GADLWEALMAR-AGKEGTPVFLVGGK----PEVLAQTEAKLRTQW-NVNIVGSQDGYFTPEQRQALFERIH- 154 (243)
T ss_pred CCCeeC--hHHHHHHHHHH-HHhcCCeEEEECCC----HHHHHHHHHHHHHHh-CCEEEEEeCCCCCHHHHHHHHHHHH-
Confidence 333444 56777777773 32222223455643 555555554442221 122232 2222 1222222
Q ss_pred CcCCCCcEEEEcCCCCChHHHH
Q 024758 226 PELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 226 ~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
.+|.+.+.|.-|.-.+|.+.
T Consensus 155 --~s~~dil~VglG~PkQE~~~ 174 (243)
T PRK03692 155 --ASGAKIVTVAMGSPKQEIFM 174 (243)
T ss_pred --hcCCCEEEEECCCcHHHHHH
Confidence 37888888888876666654
No 373
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=20.01 E-value=4.5e+02 Score=23.28 Aligned_cols=60 Identities=13% Similarity=0.139 Sum_probs=32.7
Q ss_pred hCCCcEEEEcCCchH---HHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024758 150 LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDR 215 (263)
Q Consensus 150 ~~g~~laI~TnK~~~---~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGDs 215 (263)
++|.+++++=+++.. .++.+-++ +|+ .|+|...+ -+|+--..++++.+.+..+.++||=+
T Consensus 103 ~~~~~v~llG~~~~v~~~a~~~l~~~-y~l-----~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG 166 (243)
T PRK03692 103 KEGTPVFLVGGKPEVLAQTEAKLRTQ-WNV-----NIVGSQDGYFTPEQRQALFERIHASGAKIVTVAMG 166 (243)
T ss_pred hcCCeEEEECCCHHHHHHHHHHHHHH-hCC-----EEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECC
Confidence 678999999888773 22222232 333 24454333 12333344555555556667777744
Done!