BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024759
(263 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1
Length = 255
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 162/254 (63%), Gaps = 2/254 (0%)
Query: 9 LLVYVAATVLSISEGSERIHS-LIRQPVAGTVSAESDPAGFSCLSWRFGVETKNIRDLPT 67
+ ++V +L+++ G+E ++S + +P+ + C +WRF VET N+ T
Sbjct: 1 MRIFVFLVLLTVAIGTENLNSHVFPRPLIIEYPEKQLRDELKCTTWRFVVETNNLSPWKT 60
Query: 68 VPKVCQHYVADYMLSDQFLQDSKVVTEEAFKYAKTVKLAGDGKDIWILDVDDSLITHVDF 127
+P+ C YV +YM+ + + V++EA +YAK+V L DG+D+WI DVD++L++++ +
Sbjct: 61 IPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDLGDDGRDVWIFDVDETLLSNLPY 120
Query: 128 YAQNGFGTEIFDVTALINYLAQGISPALPESLKLYRRLLRLGFKIVLLTGRMEPSRNFTE 187
Y+ + +G E+FD ++ G +PAL SLKLY+ +L+LGFK+ LLTGR E R+ T
Sbjct: 121 YSDHRYGLEVFDDVEFDKWVENGTAPALGSSLKLYQEVLKLGFKVFLLTGRSERHRSVTV 180
Query: 188 SNLKNVGYHSWEKLILRETGEWNDTTQRAHKSAERRKLVESGYRIIGNMGDQWCDLLGDY 247
NL N G+H W KLILR + + + T +KS R +VE G+RI+GN GDQW DLLG
Sbjct: 181 ENLMNAGFHDWHKLILRGSDD-HGKTATTYKSERRNAMVEEGFRIVGNSGDQWSDLLGSS 239
Query: 248 PGHRTFKLPNPVFY 261
+R+FKLPNP++Y
Sbjct: 240 MSYRSFKLPNPMYY 253
>sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1
Length = 254
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 156/256 (60%), Gaps = 7/256 (2%)
Query: 9 LLVYVAATVLSISEGSERIHSLIRQPVAGTVSAESDPAGFSCLSWRFGVETKNIRDLPTV 68
+LV+ AT+L + + H+ P+ + C SWR VE NI T+
Sbjct: 5 VLVFFVATILV----AWQCHAYDMFPLRMNTGYGARTPEVKCASWRLAVEAHNIFGFETI 60
Query: 69 PKVCQHYVADYMLSDQFLQDSKVVTEEAFKYAKTVKLAGDGKDIWILDVDDSLITHVDFY 128
P+ C +Y+ +Q+ DSK V ++A+ YA+ +++ KD ++ +D ++++++ +Y
Sbjct: 61 PEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV--HPKDTFVFSIDGTVLSNIPYY 118
Query: 129 AQNGFGTEIFDVTALINYLAQGISPALPESLKLYRRLLRLGFKIVLLTGRMEPSRNFTES 188
++G+G E F+ T ++ +G +PALPE+LK Y +L+ LGFKI+ L+GR + TE+
Sbjct: 119 KKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEA 178
Query: 189 NLKNVGYHSWEKLILRETGEWNDTTQRAHKSAERRKLVESGYRIIGNMGDQWCDLLGDYP 248
NLK GYH+WEKLIL++ + + ++K+A R KL+ GY I+G +GDQW DLLG +
Sbjct: 179 NLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHR 238
Query: 249 GH-RTFKLPNPVFYTE 263
G RTFKLPNP++Y +
Sbjct: 239 GESRTFKLPNPLYYIQ 254
>sp|O82122|VSP2_ARATH Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1
SV=1
Length = 265
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 139/215 (64%), Gaps = 5/215 (2%)
Query: 49 SCLSWRFGVETKNIRDLPTVPKVCQHYVADYML-SDQFLQDSKVVTEEAFKYAKTVKLAG 107
+C SW GVET NI D TVP C+ YV DY++ S Q+ DSK V +EA+ YAK + L
Sbjct: 51 NCRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKN 110
Query: 108 DGKDIWILDVDDSLITHVDFYAQNGFGTEIFDVTALINYLAQGIS-PALPESLKLYRRLL 166
D ++WI D+DD+L++ + +YA+ G+GTE D A +L G S P LPE+L LY+ ++
Sbjct: 111 DTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNII 170
Query: 167 RLGFKIVLLTGRMEPSRNFTESNLKNVGYHSWEKLILRETGEWNDTTQRAHKSAERRKLV 226
LG + ++L+ R + +N T NL+ G W+ LIL+ G ++ Q +KS R+ LV
Sbjct: 171 ELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNG--SNLRQVVYKSKVRKSLV 228
Query: 227 ESGYRIIGNMGDQWCDLLGDYPGHRTFKLPNPVFY 261
+ GY I+GN+GDQW DL+ D PG R FKLPNP++Y
Sbjct: 229 KKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYY 262
>sp|O49195|VSP1_ARATH Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2
SV=2
Length = 270
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 5/215 (2%)
Query: 49 SCLSWRFGVETKNIRDLPTVPKVCQHYVADYML-SDQFLQDSKVVTEEAFKYAKTVKLAG 107
+C SW GVET NI + TVP C+ YV DY++ S Q+ DSK V +EA+ YAK + L
Sbjct: 56 NCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKN 115
Query: 108 DGKDIWILDVDDSLITHVDFYAQNGFGTEIFDVTALINYLAQGIS-PALPESLKLYRRLL 166
D ++WI D+DD+L++ + +YA+ G+GTE A ++L G S P LPE+L LY LL
Sbjct: 116 DTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLL 175
Query: 167 RLGFKIVLLTGRMEPSRNFTESNLKNVGYHSWEKLILRETGEWNDTTQRAHKSAERRKLV 226
LG + ++++ R + T NLK VG W+ LIL+ G + TQ +KS R LV
Sbjct: 176 ELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNG--SKLTQVVYKSKVRNSLV 233
Query: 227 ESGYRIIGNMGDQWCDLLGDYPGHRTFKLPNPVFY 261
+ GY I+GN+GDQW DL+ D PG R FKLPNP++Y
Sbjct: 234 KKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYY 267
>sp|P10743|VSPB_SOYBN Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1
Length = 254
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 140/215 (65%), Gaps = 4/215 (1%)
Query: 50 CLSWRFGVETKNIRDLPTVPKVCQHYVADYMLSDQFLQDSKVVTEEAFKYAKTVKLAGDG 109
C S+R VE NIR T+P+ C DY+ +QF DSK V ++AF YA ++ +
Sbjct: 43 CASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQQAFFYASEREVHHN- 101
Query: 110 KDIWILDVDDSLITHVDFYAQNGFGTEIFDVTALINYLAQGISPALPESLKLYRRLLRLG 169
DI+I +D+++++++ +Y ++G+G E F+ T ++ +G +PALPE+LK Y +LL LG
Sbjct: 102 -DIFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYDEWVNKGDAPALPETLKNYNKLLSLG 160
Query: 170 FKIVLLTGRMEPSRNFTESNLKNVGYHSWEKLILRETGEWNDTTQRAHKSAERRKLVESG 229
FKIV L+GR TE+NLK G+H+WE+LIL++ ++KSA R L+ G
Sbjct: 161 FKIVFLSGRYLDKMAVTEANLKKAGFHTWEQLILKDP-HLITPNALSYKSAMRENLLRQG 219
Query: 230 YRIIGNMGDQWCDLLGDYPGH-RTFKLPNPVFYTE 263
YRI+G +GDQW DLLGD+ G RTFKLPNP++Y E
Sbjct: 220 YRIVGIIGDQWSDLLGDHRGESRTFKLPNPMYYIE 254
>sp|P10742|S25K_SOYBN Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2
SV=2
Length = 291
Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 152/252 (60%), Gaps = 7/252 (2%)
Query: 9 LLVYVAATVLSISEGSERIHSLIRQPVAGTVSAESDPAGFSCLSWRFGVETKNIRDLPTV 68
+LV+ AT+L + + H+ P+ + C SWR VE NI T+
Sbjct: 2 VLVFFVATILV----AWQCHAYDMFPLRMNTGYGARTPEVKCASWRLAVEAHNIFGFETI 57
Query: 69 PKVCQHYVADYMLSDQFLQDSKVVTEEAFKYAKTVKLAGDGKDIWILDVDDSLITHVDFY 128
P+ C +Y+ +Q+ DSK V ++A+ YA+ +++ KD ++ +D ++++++ +Y
Sbjct: 58 PEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV--HPKDTFVFSIDGTVLSNIPYY 115
Query: 129 AQNGFGTEIFDVTALINYLAQGISPALPESLKLYRRLLRLGFKIVLLTGRMEPSRNFTES 188
++G+G E F+ T ++ +G +PALPE+LK Y +L+ LGFKI+ L+GR + TE+
Sbjct: 116 KKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEA 175
Query: 189 NLKNVGYHSWEKLILRETGEWNDTTQRAHKSAERRKLVESGYRIIGNMGDQWCDLLGDYP 248
NLK GYH+WEKLIL++ + + ++K+A R KL+ GY I+G +GDQW DLLG +
Sbjct: 176 NLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHR 235
Query: 249 GH-RTFKLPNPV 259
G RTFKLPNP
Sbjct: 236 GESRTFKLPNPC 247
>sp|O04195|Y2992_ARATH Uncharacterized protein At2g39920 OS=Arabidopsis thaliana
GN=At2g39920 PE=2 SV=2
Length = 283
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 68 VPKVCQHYVADYMLSDQFLQDSKVVTEEAFKYAKTVKLAGDGKDIWILDVDDSLITHVDF 127
+P +C+ + +L++ + A Y +T+K D D+ ++D+DD+ + D
Sbjct: 106 LPLLCRDVALHRIKQGIYLRELNFTIQMALTYFQTIKPMNDNCDVVVIDIDDTNLLEQDS 165
Query: 128 YAQNGFGTEIFDVTALINYLAQGISPALPESLKLYRRLLRLGFKIVLLTGRMEPSRNFTE 187
Y + Y+ + L LY +L G+ +VLL+ R E RN T
Sbjct: 166 Y--------------YMKYIEEAKHQKSILILALYSKLRSQGYSMVLLSRRPETERNATI 211
Query: 188 SNLKNVGYHSWEKLILRETGEWNDTTQRAHKSAERRKLVESGYRIIGNMGDQWCDLLG-- 245
LK+ GY W LI+ DT Q+ +E G+R+IG +G+ L G
Sbjct: 212 EQLKSRGYSDWSHLIMSR----EDTRQKEE--------LERGHRVIGVIGNHMDVLRGQW 259
Query: 246 DYPGHRTFKLPNPVF 260
++ R FKLP+ +
Sbjct: 260 NWQSKRLFKLPSLTY 274
>sp|Q5Z3Z6|RECF_NOCFA DNA replication and repair protein RecF OS=Nocardia farcinica
(strain IFM 10152) GN=recF PE=3 SV=1
Length = 388
Score = 38.1 bits (87), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 35/174 (20%)
Query: 77 ADYMLSDQFLQDSKVVTEEAFKYAKTVKLAGDGKDIWILDVDDSLITHVDFYAQNGFGTE 136
ADY D+ L+ + + A ++A++ D+ LDV D H+ +A
Sbjct: 152 ADY---DRVLRQRSALLKTAGRHARSTA------DLSTLDVWDG---HLAGHAAVLVAQR 199
Query: 137 IFDVTALINYLAQGISPALPESLKLYRRLLRLGFKIVLLTGR-MEPSRNFTESNLKNVGY 195
+ V L YLA+ PES R +G++ L G ++P+R + +
Sbjct: 200 LRLVHDLFPYLAEAYRSLAPES-----RPAAIGYRSAYLPGEFLDPARAPRDDDAA---- 250
Query: 196 HSWEKLILRETGEWNDTTQRAHKSAERRKLVESGYRIIGNMGDQWCDLLGDYPG 249
+ E++ILRE +A RRK +E G ++G D+ +LGD P
Sbjct: 251 -ALEEIILREL------------AAARRKELERGVCLVGPHRDELELMLGDTPA 291
>sp|Q96JB1|DYH8_HUMAN Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2
Length = 4490
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 223 RKLVESGYRIIGNMGDQWCDLLGDYPGHRTFKLPNPVFYTE 263
+ ++SG +GD+ CD++ + + T KLPNP F E
Sbjct: 3531 KNFIKSGTTFKVKVGDKECDIMDTFKLYITTKLPNPAFTPE 3571
>sp|Q91XQ0|DYH8_MOUSE Dynein heavy chain 8, axonemal OS=Mus musculus GN=Dnahc8 PE=2 SV=2
Length = 4731
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 223 RKLVESGYRIIGNMGDQWCDLLGDYPGHRTFKLPNPVFYTE 263
+ ++SG +GD+ CD++ + + T KLPNP F E
Sbjct: 3772 KNFIKSGTAFKVKVGDKECDIMDTFKLYITTKLPNPAFTPE 3812
>sp|P17889|IF2_BACSU Translation initiation factor IF-2 OS=Bacillus subtilis (strain
168) GN=infB PE=3 SV=1
Length = 716
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 61/161 (37%), Gaps = 27/161 (16%)
Query: 22 EGSERIHSLIRQPVAGTVSAESDPAGFSCLSWRFGVETK-----------------NIRD 64
E SE I L+ V T++ E D ++ +GVET+ N D
Sbjct: 155 EPSELIKKLMLLGVMATINQELDKDTIELIASEYGVETEEVIVLEETELEKYEEPDNEED 214
Query: 65 L---PTVPKVCQHYVADYMLSDQFLQDSKVVTEEAFKYAKTV---KLAGDGKDIWILDVD 118
L P V + H ++ +KVV EA + + ++ +GK I LD
Sbjct: 215 LEIRPPVVTIMGHVDHGKTTLLDSIRKTKVVEGEAGGITQHIGAYQIEENGKKITFLDTP 274
Query: 119 DSLITHVDFYAQNGFGTEIFDVTALINYLAQGISPALPESL 159
H F G E+ D+T L+ G+ P E++
Sbjct: 275 G----HAAFTTMRARGAEVTDITILVVAADDGVMPQTVEAI 311
>sp|A7Z4T4|IF2_BACA2 Translation initiation factor IF-2 OS=Bacillus amyloliquefaciens
(strain FZB42) GN=infB PE=3 SV=1
Length = 716
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 27/161 (16%)
Query: 22 EGSERIHSLIRQPVAGTVSAESDPAGFSCLSWRFGVETKNI-----------------RD 64
E SE I L+ V T++ E D ++ +GVET+ + D
Sbjct: 155 EPSELIKKLMLLGVMATINQELDKDTIELIASEYGVETEEVIVLEETELEKYEEADKEED 214
Query: 65 L---PTVPKVCQHYVADYMLSDQFLQDSKVVTEEAFKYAKTV---KLAGDGKDIWILDVD 118
L P V + H ++ +KVV EA + + ++ +GK I LD
Sbjct: 215 LQIRPPVVTIMGHVDHGKTTLLDSIRKTKVVEGEAGGITQHIGAYQIEENGKKITFLDTP 274
Query: 119 DSLITHVDFYAQNGFGTEIFDVTALINYLAQGISPALPESL 159
H F G E+ D+T L+ G+ P E++
Sbjct: 275 G----HAAFTTMRARGAEVTDITILVVAADDGVMPQTVEAI 311
>sp|Q7NBQ3|LSPA_MYCGA Lipoprotein signal peptidase OS=Mycoplasma gallisepticum (strain
R(low / passage 15 / clone 2)) GN=lspA PE=3 SV=1
Length = 304
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 169 GFKIVLLTGRMEPSRNFTESNLKNVG-----YHSWEKLILRETGEWNDTTQRAHKSAERR 223
GF ++ LT ++ + + N K V H W+ + L E +WND ++
Sbjct: 169 GFALIFLTFVVDIFLDLKKKNKKTVSTTNKQLHGWKSIPLEERSKWNDWADHKCVFCNQQ 228
Query: 224 KLVESGYRIIGNMGDQWCDLLG 245
++ S I N + DL+
Sbjct: 229 MMINSNEVICSNEECAYIDLIN 250
>sp|B0KCB7|HUTI_THEP3 Imidazolonepropionase OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=hutI PE=3 SV=1
Length = 415
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 24/152 (15%)
Query: 39 VSAESDPAGFSCLSWRFGVETKNIRDLPTVPKVCQHYVADYMLSDQFLQD-------SKV 91
+ A S P F SW G K I ++ +PKV + +A++ D F +D SK
Sbjct: 178 LGAHSIPTEFKENSW--GYVDKIINEM--IPKVKEENLAEF--CDVFCEDGAFDYEQSKK 231
Query: 92 VTEEAFKYAKTVKL-------AGDGKDIWILDVDDSLITHVDFYAQNGFGTEIFDVTALI 144
+ EEA KY +K+ +G G+ IL + H++ ++ G E+ +
Sbjct: 232 ILEEAKKYGMKLKIHADELTQSGGGELAGILGAVSA--DHLEEVSEKGI--ELMKKAGTV 287
Query: 145 NYLAQGISPALPESLKLYRRLLRLGFKIVLLT 176
L G+S L R+L+ G + L T
Sbjct: 288 GVLLPGVSYFLDRPYANARKLIEKGLAVALGT 319
>sp|Q8JVC0|P3_PCVC Uncharacterized protein p3 OS=Penicillium chrysogenum virus
(isolate Caston/2003) GN=p3 PE=4 SV=1
Length = 912
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 173 VLLTGRMEPSRN-----FTESNLKNVGYHSWEKLILRETGEWNDTTQRAHKSA-ERRKLV 226
V L+G ++P R E LK S+ L +R EW D Q AH+ A E K V
Sbjct: 504 VFLSGNLKPLRECAAGLLGECKLKRKHVISY-LLGVRLLNEWEDE-QGAHRVAREAMKQV 561
Query: 227 ESGYRIIGNMGDQWCDLLG 245
+ + +G + D+W DL+G
Sbjct: 562 ATNWFRVGKIRDEWFDLIG 580
>sp|A9BHZ7|MNME_PETMO tRNA modification GTPase MnmE OS=Petrotoga mobilis (strain DSM
10674 / SJ95) GN=mnmE PE=3 SV=1
Length = 452
Score = 30.8 bits (68), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 143 LINYLAQGISPALPESLKLYRRLLRLGFKIVLLTGRMEPSRNFTESN 189
LI ++ G +P E +Y +L LG K V++ S NFTE+N
Sbjct: 295 LILFVLDGTTPFTQEDELIYNKLNELGDKTVIIILNKSDSPNFTENN 341
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,030,088
Number of Sequences: 539616
Number of extensions: 4237222
Number of successful extensions: 9410
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9379
Number of HSP's gapped (non-prelim): 17
length of query: 263
length of database: 191,569,459
effective HSP length: 115
effective length of query: 148
effective length of database: 129,513,619
effective search space: 19168015612
effective search space used: 19168015612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)