Query 024761
Match_columns 263
No_of_seqs 222 out of 1098
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 07:12:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024761.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024761hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03002 oxidoreductase, 2OG-F 100.0 7.3E-63 1.6E-67 436.4 26.1 246 12-258 10-255 (332)
2 COG3491 PcbC Isopenicillin N s 100.0 1E-60 2.3E-65 402.7 21.4 231 13-258 2-242 (322)
3 PTZ00273 oxidase reductase; Pr 100.0 7.4E-59 1.6E-63 410.0 22.3 235 13-258 2-246 (320)
4 PLN02485 oxidoreductase 100.0 1.2E-57 2.6E-62 403.6 23.0 235 13-258 4-257 (329)
5 PLN02997 flavonol synthase 100.0 8.2E-57 1.8E-61 396.0 22.8 219 14-258 30-250 (325)
6 PLN02254 gibberellin 3-beta-di 100.0 6.6E-57 1.4E-61 401.1 21.2 221 14-258 54-278 (358)
7 PLN02750 oxidoreductase, 2OG-F 100.0 1.3E-56 2.7E-61 398.8 22.7 229 14-258 24-262 (345)
8 PLN02515 naringenin,2-oxogluta 100.0 2.4E-56 5.3E-61 397.5 22.5 223 15-258 36-264 (358)
9 PLN02276 gibberellin 20-oxidas 100.0 1.8E-56 4E-61 399.5 21.3 229 14-258 38-273 (361)
10 PLN02216 protein SRG1 100.0 4.8E-56 1E-60 396.0 21.5 221 15-258 51-278 (357)
11 PLN02758 oxidoreductase, 2OG-F 100.0 5.9E-56 1.3E-60 396.0 22.0 223 13-258 49-280 (361)
12 PLN02912 oxidoreductase, 2OG-F 100.0 2.5E-55 5.4E-60 390.2 21.2 220 14-258 39-264 (348)
13 PLN03178 leucoanthocyanidin di 100.0 3.9E-55 8.4E-60 391.1 20.5 222 14-258 45-278 (360)
14 PLN02156 gibberellin 2-beta-di 100.0 6.5E-55 1.4E-59 384.8 21.4 222 14-258 24-248 (335)
15 PLN02299 1-aminocyclopropane-1 100.0 5.3E-55 1.2E-59 384.1 20.2 217 13-258 3-226 (321)
16 PLN02639 oxidoreductase, 2OG-F 100.0 9.6E-55 2.1E-59 385.6 21.7 220 14-258 35-258 (337)
17 PLN02704 flavonol synthase 100.0 9.5E-55 2.1E-59 385.3 20.6 223 13-258 39-266 (335)
18 PLN00417 oxidoreductase, 2OG-F 100.0 1.6E-54 3.4E-59 385.0 21.7 223 13-258 41-271 (348)
19 PLN02947 oxidoreductase 100.0 1.8E-54 3.9E-59 387.2 21.6 222 13-258 63-292 (374)
20 PLN02393 leucoanthocyanidin di 100.0 2E-54 4.4E-59 386.5 20.7 222 13-258 48-281 (362)
21 PLN02984 oxidoreductase, 2OG-F 100.0 4E-54 8.6E-59 380.6 21.5 223 14-258 36-267 (341)
22 PLN02904 oxidoreductase 100.0 7.3E-54 1.6E-58 381.7 22.5 221 14-258 49-275 (357)
23 PLN02365 2-oxoglutarate-depend 100.0 8.2E-54 1.8E-58 374.0 21.3 214 13-258 2-219 (300)
24 KOG0143 Iron/ascorbate family 100.0 2.2E-53 4.8E-58 372.9 22.2 224 13-258 14-245 (322)
25 PLN02403 aminocyclopropanecarb 100.0 1.3E-52 2.9E-57 365.7 20.3 213 16-258 2-222 (303)
26 PLN03001 oxidoreductase, 2OG-F 100.0 5.3E-42 1.2E-46 293.3 14.4 179 59-258 1-183 (262)
27 PF14226 DIOX_N: non-haem diox 100.0 3.1E-29 6.7E-34 189.8 6.4 113 17-133 1-115 (116)
28 PLN03176 flavanone-3-hydroxyla 99.8 1.6E-19 3.5E-24 136.6 9.3 74 14-87 35-114 (120)
29 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.5 1.1E-14 2.3E-19 106.7 5.7 64 184-257 2-67 (98)
30 PRK08130 putative aldolase; Va 86.2 1 2.3E-05 37.4 4.1 50 15-64 126-177 (213)
31 PF13640 2OG-FeII_Oxy_3: 2OG-F 85.7 0.67 1.5E-05 33.2 2.4 59 186-253 1-76 (100)
32 smart00702 P4Hc Prolyl 4-hydro 84.8 5.8 0.00013 31.6 7.7 80 154-251 60-151 (178)
33 PRK08333 L-fuculose phosphate 84.8 1.3 2.8E-05 35.9 3.9 48 16-63 120-169 (184)
34 PRK05874 L-fuculose-phosphate 80.1 2.9 6.2E-05 34.9 4.3 36 16-51 127-162 (217)
35 PRK05467 Fe(II)-dependent oxyg 80.0 8.4 0.00018 32.4 7.0 26 222-252 129-154 (226)
36 COG2140 Thermophilic glucose-6 78.5 4.5 9.7E-05 33.4 4.8 73 182-263 88-160 (209)
37 PRK08660 L-fuculose phosphate 77.1 4.3 9.4E-05 32.7 4.4 47 16-63 115-163 (181)
38 PF07350 DUF1479: Protein of u 76.0 1.9 4E-05 39.5 2.2 55 13-68 46-100 (416)
39 PF00596 Aldolase_II: Class II 75.8 1.8 4E-05 34.8 1.9 37 15-51 122-159 (184)
40 PRK06833 L-fuculose phosphate 75.6 3.7 8E-05 34.1 3.7 49 16-64 124-174 (214)
41 PRK08087 L-fuculose phosphate 74.5 4.3 9.2E-05 33.8 3.8 49 16-64 122-172 (215)
42 PRK06755 hypothetical protein; 72.8 4.2 9E-05 33.8 3.3 49 16-64 136-186 (209)
43 PRK03634 rhamnulose-1-phosphat 71.9 5 0.00011 34.8 3.8 49 16-64 179-229 (274)
44 TIGR02624 rhamnu_1P_ald rhamnu 68.4 5.9 0.00013 34.2 3.4 49 16-64 177-227 (270)
45 TIGR03328 salvage_mtnB methylt 68.1 7.5 0.00016 31.7 3.9 47 16-63 126-177 (193)
46 PRK06357 hypothetical protein; 67.0 8.7 0.00019 32.0 4.1 36 16-51 130-171 (216)
47 TIGR01086 fucA L-fuculose phos 67.0 6.8 0.00015 32.5 3.4 36 16-51 121-156 (214)
48 PRK06557 L-ribulose-5-phosphat 66.3 6.7 0.00014 32.7 3.3 50 15-64 129-182 (221)
49 cd00398 Aldolase_II Class II A 64.3 5.8 0.00013 32.7 2.5 49 15-63 121-173 (209)
50 TIGR02409 carnitine_bodg gamma 56.0 17 0.00038 32.7 4.3 51 14-67 107-158 (366)
51 PRK07490 hypothetical protein; 55.7 14 0.0003 31.4 3.4 49 16-64 133-184 (245)
52 PRK06754 mtnB methylthioribulo 53.2 17 0.00036 30.1 3.4 34 16-51 137-172 (208)
53 PRK06661 hypothetical protein; 50.5 18 0.0004 30.4 3.3 36 16-51 123-160 (231)
54 COG1402 Uncharacterized protei 50.0 48 0.001 28.3 5.8 41 28-68 89-132 (250)
55 PRK09553 tauD taurine dioxygen 49.3 36 0.00079 29.3 5.1 52 15-69 14-65 (277)
56 PLN00052 prolyl 4-hydroxylase; 48.5 1.1E+02 0.0023 27.1 7.9 12 239-250 206-217 (310)
57 PRK05834 hypothetical protein; 46.9 32 0.00069 28.1 4.1 49 16-64 121-175 (194)
58 TIGR00568 alkb DNA alkylation 44.9 1.6E+02 0.0035 23.5 7.8 60 186-255 97-162 (169)
59 PF11243 DUF3045: Protein of u 43.0 22 0.00047 24.5 2.1 21 32-52 36-56 (89)
60 COG0289 DapB Dihydrodipicolina 41.5 67 0.0015 27.7 5.3 44 19-65 73-117 (266)
61 PF01113 DapB_N: Dihydrodipico 40.5 40 0.00087 25.2 3.5 44 19-65 71-115 (124)
62 PF03668 ATP_bind_2: P-loop AT 40.4 39 0.00084 29.5 3.8 29 34-64 17-45 (284)
63 PF06820 Phage_fiber_C: Putati 39.1 23 0.00051 22.8 1.7 35 204-242 17-61 (64)
64 PRK09220 methylthioribulose-1- 38.8 43 0.00094 27.5 3.8 48 16-64 134-186 (204)
65 PF12851 Tet_JBP: Oxygenase do 36.7 60 0.0013 25.9 4.2 48 204-257 86-146 (171)
66 PRK08193 araD L-ribulose-5-pho 34.8 57 0.0012 27.4 3.9 36 16-51 124-172 (231)
67 PRK07044 aldolase II superfami 33.0 56 0.0012 27.8 3.6 50 16-65 138-190 (252)
68 PF10055 DUF2292: Uncharacteri 32.5 35 0.00075 20.1 1.5 20 209-229 13-32 (38)
69 PRK15401 alpha-ketoglutarate-d 30.9 3.1E+02 0.0068 22.8 8.9 60 186-255 118-183 (213)
70 PF01471 PG_binding_1: Putativ 30.3 61 0.0013 20.2 2.7 41 30-70 4-44 (57)
71 PRK06486 hypothetical protein; 30.0 61 0.0013 27.8 3.4 48 16-63 148-199 (262)
72 PF03460 NIR_SIR_ferr: Nitrite 29.0 83 0.0018 20.5 3.3 38 28-65 23-68 (69)
73 PF12368 DUF3650: Protein of u 29.0 26 0.00057 19.1 0.6 17 44-60 9-25 (28)
74 TIGR03581 EF_0839 conserved hy 28.0 1.6E+02 0.0034 24.8 5.2 39 26-65 161-200 (236)
75 TIGR02410 carnitine_TMLD trime 27.7 85 0.0019 28.3 4.1 50 16-68 100-151 (362)
76 TIGR02130 dapB_plant dihydrodi 27.2 1.3E+02 0.0027 26.2 4.8 39 18-59 72-111 (275)
77 COG1741 Pirin-related protein 26.3 1.2E+02 0.0025 26.5 4.4 48 181-231 38-91 (276)
78 PF13532 2OG-FeII_Oxy_2: 2OG-F 26.3 83 0.0018 25.1 3.4 61 185-255 98-164 (194)
79 TIGR01573 cas2 CRISPR-associat 25.9 71 0.0015 22.7 2.6 49 19-67 6-59 (95)
80 cd00379 Ribosomal_L10_P0 Ribos 25.5 2.4E+02 0.0052 21.5 5.8 37 28-64 4-41 (155)
81 PF02633 Creatininase: Creatin 25.4 1.2E+02 0.0027 25.3 4.4 46 16-61 72-121 (237)
82 PF08823 PG_binding_2: Putativ 25.1 1.1E+02 0.0024 20.8 3.3 34 28-61 15-48 (74)
83 PF12791 RsgI_N: Anti-sigma fa 24.7 42 0.00091 21.1 1.1 24 227-257 10-33 (56)
84 TIGR00760 araD L-ribulose-5-ph 23.5 1.1E+02 0.0024 25.6 3.8 36 16-51 125-173 (231)
85 PF11548 Receptor_IA-2: Protei 23.4 60 0.0013 23.1 1.8 34 155-189 19-52 (91)
86 cd00491 4Oxalocrotonate_Tautom 23.2 1.2E+02 0.0027 18.6 3.2 26 149-174 14-39 (58)
87 PRK02289 4-oxalocrotonate taut 23.1 1.1E+02 0.0025 19.4 3.0 26 149-174 15-40 (60)
88 PF01361 Tautomerase: Tautomer 23.0 1.1E+02 0.0023 19.3 2.8 26 149-174 14-39 (60)
89 PRK01964 4-oxalocrotonate taut 22.8 1.2E+02 0.0025 19.5 3.0 26 149-174 15-40 (64)
90 PF08699 DUF1785: Domain of un 22.8 61 0.0013 20.3 1.6 24 223-252 19-42 (52)
91 PF11043 DUF2856: Protein of u 22.2 1.1E+02 0.0024 21.1 2.8 23 54-76 21-43 (97)
92 PF09989 DUF2229: CoA enzyme a 22.0 2.2E+02 0.0047 23.8 5.2 42 16-65 117-158 (221)
93 TIGR00013 taut 4-oxalocrotonat 21.6 1.4E+02 0.003 18.9 3.2 25 149-173 15-39 (63)
94 PF02668 TauD: Taurine catabol 20.7 1.7E+02 0.0037 24.1 4.4 35 29-66 24-58 (258)
95 PRK15331 chaperone protein Sic 20.4 95 0.0021 24.8 2.5 42 27-69 9-50 (165)
No 1
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=7.3e-63 Score=436.42 Aligned_cols=246 Identities=64% Similarity=1.166 Sum_probs=208.2
Q ss_pred CCCCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCCCCcCcccCcc
Q 024761 12 KAHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHD 91 (263)
Q Consensus 12 ~~~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~ 91 (263)
+....||+|||++.++..++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.....++||.+.+.
T Consensus 10 ~~~~~iP~IDl~~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~~~~~GY~~~~~ 89 (332)
T PLN03002 10 MKVSSLNCIDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRNEKHRGYTPVLD 89 (332)
T ss_pred CCCCCCCEEeCCchhHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCCCcCcccc
Confidence 45668999999976666789999999999999999999999999999999999999999999999876666899998877
Q ss_pred cccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Q 024761 92 ELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNAD 171 (263)
Q Consensus 92 e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 171 (263)
+..+.......|+||.|+++.+.+.+++.....++++|.||.++.+|+||+++++|+++|.+|+.+||++||++|||+++
T Consensus 90 e~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 169 (332)
T PLN03002 90 EKLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLDVG 169 (332)
T ss_pred cccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 76543333347999999998765554443333456789999755578999999999999999999999999999999999
Q ss_pred cccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeEEEE
Q 024761 172 FFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLVLCH 251 (263)
Q Consensus 172 ~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~lvVN 251 (263)
+|.+.+.++.+.+.||++|||+++... ...+|+++|||+|+||||+||+++||||+.+++..+++|++|+|+||++|||
T Consensus 170 ~f~~~~~~~~~~~~lrl~~YP~~~~~~-~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVN 248 (332)
T PLN03002 170 YFDRTEMLGKPIATMRLLRYQGISDPS-KGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIVN 248 (332)
T ss_pred HhccccccCCCchheeeeeCCCCCCcc-cCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCCeEEEE
Confidence 998433556677899999999986542 3578999999999999999999999999875321234699999999999999
Q ss_pred eCchhhh
Q 024761 252 FHFPALL 258 (263)
Q Consensus 252 vGd~l~~ 258 (263)
|||+|+.
T Consensus 249 iGD~L~~ 255 (332)
T PLN03002 249 LGDMLER 255 (332)
T ss_pred HHHHHHH
Confidence 9999974
No 2
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=1e-60 Score=402.74 Aligned_cols=231 Identities=39% Similarity=0.698 Sum_probs=204.3
Q ss_pred CCCcccEeeCCC-----c-chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC--CCc
Q 024761 13 AHTVLHCIDLSS-----P-DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE--KHR 84 (263)
Q Consensus 13 ~~~~iPvIDls~-----~-~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~ 84 (263)
++..||+|||+. + ++...+++|++||+++|||||+||||+.++++++++++++||+||.|+|.++.... .+|
T Consensus 2 ~~~~lp~idls~~~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~r 81 (322)
T COG3491 2 STRDLPIIDLSELAGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHR 81 (322)
T ss_pred CCCcCceeccHHhcCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCcccc
Confidence 457899999982 2 35778999999999999999999999999999999999999999999999987654 499
Q ss_pred CcccCcccccCCCCCCCCCcceehcccccCCCCCCCC--CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 024761 85 GYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPES--EKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARII 162 (263)
Q Consensus 85 GY~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~--~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l 162 (263)
||.+.+.|.++ +..||||.++++.+.+...+.. ..++++||.|| .+|+||+++..|+++|.+++.+||++|
T Consensus 82 GY~~~~~E~t~----g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP---~ip~~r~~ll~~~~~~~~~~~rLL~ai 154 (322)
T COG3491 82 GYTPHGGELTD----GEPDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWP---AIPGLRDALLQYYRAMTAVGLRLLRAI 154 (322)
T ss_pred ccccCcccccC----CccchhhhcccccccccccCCCccCCCcCCCCCCc---cchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988754 3469999999998765333322 44778999999 389999999999999999999999999
Q ss_pred HHhCCCCcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcC
Q 024761 163 ALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVP 242 (263)
Q Consensus 163 a~~Lgl~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~ 242 (263)
|.+|+|++++|+ ...+++.+++|++|||+.+.. ++..+.|+|||+|+||||+||.++||||+.+.| +|++|+
T Consensus 155 A~~LdL~~d~Fd--~~~~d~~~~~RLlrYP~~~~~--~~~~~~GaHtD~G~lTLl~Qd~~~GLqv~~~~g----~Wl~v~ 226 (322)
T COG3491 155 ALGLDLPEDFFD--KRTSDPNSVLRLLRYPSRPAR--EGADGVGAHTDYGLLTLLFQDDVGGLEVRPPNG----GWLDVP 226 (322)
T ss_pred HHHcCCChhhhh--hccCCchheEEEEecCCCccc--ccccccccccCCCeEEEEEecccCCeEEecCCC----CeeECC
Confidence 999999999999 668889999999999987654 456677999999999999999999999999876 499999
Q ss_pred CCCCeEEEEeCchhhh
Q 024761 243 PLKGLVLCHFHFPALL 258 (263)
Q Consensus 243 p~~g~lvVNvGd~l~~ 258 (263)
|+||++|||+||+|+-
T Consensus 227 P~pgtlvVNiGdmLe~ 242 (322)
T COG3491 227 PIPGTLVVNIGDMLER 242 (322)
T ss_pred CCCCeEEEeHHHHHHH
Confidence 9999999999999974
No 3
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=7.4e-59 Score=409.99 Aligned_cols=235 Identities=36% Similarity=0.647 Sum_probs=199.9
Q ss_pred CCCcccEeeCCCc---c---hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccC--CCCc
Q 024761 13 AHTVLHCIDLSSP---D---IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRN--EKHR 84 (263)
Q Consensus 13 ~~~~iPvIDls~~---~---~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~~ 84 (263)
+.++||||||+.. + +.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ..++
T Consensus 2 ~~~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~ 81 (320)
T PTZ00273 2 TRASLPVIDVSPLFGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHR 81 (320)
T ss_pred CCCCCCEEecHHhcCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCC
Confidence 4568999999832 1 345689999999999999999999999999999999999999999999998543 3479
Q ss_pred CcccCcccccCCCCCCCCCcceehcccccCCCCCCC--CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 024761 85 GYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPE--SEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARII 162 (263)
Q Consensus 85 GY~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~--~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l 162 (263)
||.+.+.+.... ....|++|+|.++...+.+++. ...++.++|.||. .+|+|++++++|+++|.+|+.+||++|
T Consensus 82 GY~~~~~e~~~~--~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP~--~~p~fr~~~~~y~~~~~~l~~~ll~~l 157 (320)
T PTZ00273 82 GYGAFGAEQLDP--SKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHPT--QVEGWMELMETHYRDMQALALVLLRAL 157 (320)
T ss_pred CCCCccccccCC--CCCCCccceEEeeccCCcccchhhccccccCCCCCCC--cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888766432 2346999999998654433322 1234567899996 478999999999999999999999999
Q ss_pred HHhCCCCcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcC
Q 024761 163 ALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVP 242 (263)
Q Consensus 163 a~~Lgl~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~ 242 (263)
|++||+++++|. +.+..+.+.||++|||+++.. .+..+|+++|||+|+||||+||.++||||+.++| +|++|+
T Consensus 158 a~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~~~~~-~~~~~g~~~HTD~g~lTlL~qd~~~GLqV~~~~g----~Wi~V~ 230 (320)
T PTZ00273 158 ALAIGLREDFFD--SKFMEPLSVFRMKHYPALPQT-KKGRTVCGEHTDYGIITLLYQDSVGGLQVRNLSG----EWMDVP 230 (320)
T ss_pred HHHhCcCHHHHH--HhhCCCcceeeeeecCCCCCc-cccCcccccccCCCeEEEEecCCCCceEEECCCC----CEEeCC
Confidence 999999999998 667778889999999998653 2467899999999999999999999999998766 499999
Q ss_pred CCCCeEEEEeCchhhh
Q 024761 243 PLKGLVLCHFHFPALL 258 (263)
Q Consensus 243 p~~g~lvVNvGd~l~~ 258 (263)
|+||++|||+||+|+-
T Consensus 231 p~pg~lvVNvGD~l~~ 246 (320)
T PTZ00273 231 PLEGSFVVNIGDMMEM 246 (320)
T ss_pred CCCCeEEEEHHHHHHH
Confidence 9999999999999974
No 4
>PLN02485 oxidoreductase
Probab=100.00 E-value=1.2e-57 Score=403.58 Aligned_cols=235 Identities=29% Similarity=0.537 Sum_probs=193.7
Q ss_pred CCCcccEeeCCCc-------------chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhcc
Q 024761 13 AHTVLHCIDLSSP-------------DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLR 79 (263)
Q Consensus 13 ~~~~iPvIDls~~-------------~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~ 79 (263)
+...||||||+.. ++++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++..
T Consensus 4 ~~~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~ 83 (329)
T PLN02485 4 DFKSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKIKM 83 (329)
T ss_pred CCCCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhcc
Confidence 4467999999732 134578999999999999999999999999999999999999999999999864
Q ss_pred C--CCCcCcccCcccccCCCCCCCCCcceehcccccCCCCCCCC-CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Q 024761 80 N--EKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPES-EKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAK 156 (263)
Q Consensus 80 ~--~~~~GY~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~-~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~ 156 (263)
. ..++||++.+.+.. .+..|++|.|.++.+.+...... ...+.++|.||. .+|+||+.+++|+++|.+++.
T Consensus 84 ~~~~~~rGY~~~g~~~~----~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~ 157 (329)
T PLN02485 84 TPAAGYRGYQRIGENVT----KGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPE--NPQEFKALMEEYIKLCTDLSR 157 (329)
T ss_pred cCCCCCCCccccccccc----CCCCCcchhhhhcccCCCCcccccccccCCCCCCCC--ccHHHHHHHHHHHHHHHHHHH
Confidence 3 34799998876542 23479999999876433222111 123457899997 478999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCccccCCccceeeccCCCCCCCC--CCCcceeccccccCceeEEEeC-CCCceeEeeCCCC
Q 024761 157 VVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDP--SKGIYGAGAHSDFGLITLLATD-EVLGLQICKDKDA 233 (263)
Q Consensus 157 ~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~--~~~~~g~~~HtD~g~lTlL~qd-~~~GLqv~~~~g~ 233 (263)
+||+++|++||+++++|.+ ....++.+.||++|||+++... ++..+|+++|||+|+||||+|+ +++||||+.++|
T Consensus 158 ~ll~~~a~~Lgl~~~~f~~-~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g- 235 (329)
T PLN02485 158 KILRGIALALGGSPDEFEG-KMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSG- 235 (329)
T ss_pred HHHHHHHHHcCCChHHhhh-hhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEcCCC-
Confidence 9999999999999998872 2234567889999999986522 3467899999999999999997 589999998776
Q ss_pred CCCCeEEcCCCCCeEEEEeCchhhh
Q 024761 234 KPQIWEYVPPLKGLVLCHFHFPALL 258 (263)
Q Consensus 234 ~~~~W~~V~p~~g~lvVNvGd~l~~ 258 (263)
+|++|+|+||++||||||+|+.
T Consensus 236 ---~Wi~V~p~pg~~vVNiGD~L~~ 257 (329)
T PLN02485 236 ---EWIWAIPIPGTFVCNIGDMLKI 257 (329)
T ss_pred ---cEEECCCCCCcEEEEhHHHHHH
Confidence 4999999999999999999974
No 5
>PLN02997 flavonol synthase
Probab=100.00 E-value=8.2e-57 Score=395.95 Aligned_cols=219 Identities=27% Similarity=0.416 Sum_probs=187.0
Q ss_pred CCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCCCCcCcccCcccc
Q 024761 14 HTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDEL 93 (263)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~e~ 93 (263)
..+||||||+..++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.....++||.+...
T Consensus 30 ~~~IPvIDls~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~GY~~~~~-- 107 (325)
T PLN02997 30 AVDVPVVDLSVSDEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKEEDFEGYKRNYL-- 107 (325)
T ss_pred CCCCCeEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCccccCcccc--
Confidence 457999999977667789999999999999999999999999999999999999999999999877666899986532
Q ss_pred cCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccc
Q 024761 94 LDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFF 173 (263)
Q Consensus 94 ~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 173 (263)
.+..|++|.|..... +.. ....|.||. .+|+||+++++|+++|.+|+.+||++||++||+++++|
T Consensus 108 -----~~~~d~~e~~~~~~~-----p~~---~~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f 172 (325)
T PLN02997 108 -----GGINNWDEHLFHRLS-----PPS---IINYKYWPK--NPPQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRETF 172 (325)
T ss_pred -----cCCCCccceeEeeec-----Ccc---ccccccCCC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 234688998765311 111 124689996 46899999999999999999999999999999999999
Q ss_pred cCCccccC--CccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeEEEE
Q 024761 174 DKPEILGE--PIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLVLCH 251 (263)
Q Consensus 174 ~~~~~~~~--~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~lvVN 251 (263)
. +.+.. ..+.||++||||++.+ +..+|+++|||+|+||||+||+++||||+.+ | +|++|+|+||++|||
T Consensus 173 ~--~~~~~~~~~~~lRl~~YP~~~~~--~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~-g----~Wi~V~p~pgalvVN 243 (325)
T PLN02997 173 T--QSIGGETAEYVLRVNFYPPTQDT--ELVIGAAAHSDMGAIALLIPNEVPGLQAFKD-E----QWLDLNYINSAVVVI 243 (325)
T ss_pred H--HHhcCCcccceeeeecCCCCCCc--ccccCccCccCCCceEEEecCCCCCEEEeEC-C----cEEECCCCCCeEEEE
Confidence 8 44443 3458999999998653 4678999999999999999999999999964 4 599999999999999
Q ss_pred eCchhhh
Q 024761 252 FHFPALL 258 (263)
Q Consensus 252 vGd~l~~ 258 (263)
+||+|+.
T Consensus 244 iGD~Le~ 250 (325)
T PLN02997 244 IGDQLMR 250 (325)
T ss_pred echHHHH
Confidence 9999984
No 6
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=6.6e-57 Score=401.07 Aligned_cols=221 Identities=24% Similarity=0.408 Sum_probs=185.7
Q ss_pred CCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC-CCcCcccCccc
Q 024761 14 HTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE-KHRGYTPLHDE 92 (263)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~~~~e 92 (263)
..+||||||++. ..+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... .++||...+..
T Consensus 54 ~~~iPvIDl~~~---~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~~~~~~~FF~LP~EeK~k~~~~~~~~~Gy~~~~~~ 130 (358)
T PLN02254 54 DESIPVIDLSDP---NALTLIGHACETWGVFQVTNHGIPLSLLDDIESQTRRLFSLPAQRKLKAARSPDGVSGYGVARIS 130 (358)
T ss_pred CCCCCeEeCCCH---HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccccccccc
Confidence 357999999864 46899999999999999999999999999999999999999999999986543 47788654432
Q ss_pred ccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Q 024761 93 LLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADF 172 (263)
Q Consensus 93 ~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 172 (263)
.. ....||+|.|.+... +.. ..+|.||. .+++||+++++|+++|.+|+.+||++||++|||++++
T Consensus 131 ~~----~~~~~w~e~~~~~~~-----p~~----~~~~~wP~--~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~ 195 (358)
T PLN02254 131 SF----FNKKMWSEGFTIMGS-----PLE----HARQLWPQ--DHTKFCDVMEEYQKEMKKLAERLMWLMLGSLGITEED 195 (358)
T ss_pred cc----cCCCCceeeEEeecC-----ccc----cchhhCCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 21 234689999998622 211 24689997 4689999999999999999999999999999999988
Q ss_pred ccCCc---cccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeEE
Q 024761 173 FDKPE---ILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLVL 249 (263)
Q Consensus 173 f~~~~---~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~lv 249 (263)
|.+.. ....+.+.||++|||||+.+ +..+|+++|||+|+||||+||+++||||+.++| +|++|+|+||++|
T Consensus 196 ~~~~~~~~~~~~~~~~lRl~~YPp~p~~--~~~~G~~~HtD~g~lTiL~Qd~v~GLQV~~~~~----~Wi~V~p~pgalV 269 (358)
T PLN02254 196 IKWAGPKSGSQGAQAALQLNSYPVCPDP--DRAMGLAPHTDSSLLTILYQSNTSGLQVFREGV----GWVTVPPVPGSLV 269 (358)
T ss_pred HHHHhhcccccCcceeEEEecCCCCCCc--ccccCcCCccCCCcEEEEecCCCCCceEECCCC----EEEEcccCCCCEE
Confidence 86211 12456689999999998754 467899999999999999999999999998754 4999999999999
Q ss_pred EEeCchhhh
Q 024761 250 CHFHFPALL 258 (263)
Q Consensus 250 VNvGd~l~~ 258 (263)
|||||+|+.
T Consensus 270 VNiGD~lq~ 278 (358)
T PLN02254 270 VNVGDLLHI 278 (358)
T ss_pred EEhHHHHHH
Confidence 999999984
No 7
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.3e-56 Score=398.83 Aligned_cols=229 Identities=31% Similarity=0.445 Sum_probs=190.0
Q ss_pred CCcccEeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC-CCcCcccC
Q 024761 14 HTVLHCIDLSSP---DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE-KHRGYTPL 89 (263)
Q Consensus 14 ~~~iPvIDls~~---~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~~ 89 (263)
..+||||||+.. ++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ..+||.+.
T Consensus 24 ~~~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY~~~ 103 (345)
T PLN02750 24 DEEIPVIDLSVSTSHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFDQTTEEKRKVKRDEVNPMGYHDS 103 (345)
T ss_pred CCCCCeEECCCCCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccCcCcc
Confidence 457999999843 34567899999999999999999999999999999999999999999999986543 35799642
Q ss_pred cccccCCCCCCCCCcceehcccccCCCCCCCC----CCCC-CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024761 90 HDELLDPDTQVHGDYKEGYYIGVEVPEGDPES----EKPF-YGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIAL 164 (263)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~----~~~~-~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~ 164 (263)
+. ..+..|++|.|.++...+...|.. .... ..+|.||. .+++||+++++|++.|.+|+.+||++||+
T Consensus 104 --~~----~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~ 175 (345)
T PLN02750 104 --EH----TKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQ--NPSHFRELCQEYARQVEKLAFKLLELISL 175 (345)
T ss_pred --cc----cccCCCceeEEEEeecccccccccccccccccccccccCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 123469999999975432211110 0111 13799997 46899999999999999999999999999
Q ss_pred hCCCCcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEee-CCCCCCCCeEEcCC
Q 024761 165 ALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICK-DKDAKPQIWEYVPP 243 (263)
Q Consensus 165 ~Lgl~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~-~~g~~~~~W~~V~p 243 (263)
+||+++++|+ ..+..+.+.||++||||++.. +..+|+++|||+|+||||+||+++||||+. .+| +|++|+|
T Consensus 176 ~Lgl~~~~f~--~~~~~~~~~lR~~~YPp~~~~--~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~~g----~Wi~V~p 247 (345)
T PLN02750 176 SLGLPADRLN--GYFKDQISFARFNHYPPCPAP--HLALGVGRHKDGGALTVLAQDDVGGLQISRRSDG----EWIPVKP 247 (345)
T ss_pred HcCCCHHHHH--HHhcCcceEEEEEecCCCCCc--ccccCcCCCCCCCeEEEEecCCCCceEEeecCCC----eEEEccC
Confidence 9999999998 677778899999999998753 467899999999999999999999999986 344 5999999
Q ss_pred CCCeEEEEeCchhhh
Q 024761 244 LKGLVLCHFHFPALL 258 (263)
Q Consensus 244 ~~g~lvVNvGd~l~~ 258 (263)
+||++|||+||+|+.
T Consensus 248 ~pg~~vVNiGD~L~~ 262 (345)
T PLN02750 248 IPDAFIINIGNCMQV 262 (345)
T ss_pred CCCeEEEEhHHHHHH
Confidence 999999999999974
No 8
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=2.4e-56 Score=397.45 Aligned_cols=223 Identities=22% Similarity=0.362 Sum_probs=186.8
Q ss_pred CcccEeeCCCc-----chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC-CCcCccc
Q 024761 15 TVLHCIDLSSP-----DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE-KHRGYTP 88 (263)
Q Consensus 15 ~~iPvIDls~~-----~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~ 88 (263)
.+||||||+.. ++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ..+||..
T Consensus 36 ~~iPvIDls~~~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~ 115 (358)
T PLN02515 36 DEIPVISLAGIDEVGGRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEKLRFDMSGGKKGGFIV 115 (358)
T ss_pred CCCCEEEChhccCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhCcCCCCccCccc
Confidence 47999999843 24567899999999999999999999999999999999999999999999986543 3689963
Q ss_pred CcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 024761 89 LHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDL 168 (263)
Q Consensus 89 ~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl 168 (263)
.+... .....||+|.|.+... +.. ...+|.||+ .+|+||+++++|+++|.+|+.+||++++++||+
T Consensus 116 --~~~~~--~~~~~d~kE~~~~~~~-----~~~---~~~~n~WP~--~~~~fr~~~~~y~~~~~~L~~~ll~~la~~Lgl 181 (358)
T PLN02515 116 --SSHLQ--GEAVQDWREIVTYFSY-----PVR---TRDYSRWPD--KPEGWRAVTEEYSEKLMGLACKLLEVLSEAMGL 181 (358)
T ss_pred --ccccc--cccccCceeeeccccC-----ccc---ccccccccc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 22211 2235799999977421 111 123689997 468999999999999999999999999999999
Q ss_pred CcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeE
Q 024761 169 NADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLV 248 (263)
Q Consensus 169 ~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~l 248 (263)
++++|. +.+....+.+|++|||+++.+ +..+|+++|||+|+||||+||+++||||+.++|+ +|++|+|+||++
T Consensus 182 ~~~~f~--~~~~~~~~~lrl~~YP~~~~~--~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~~~---~Wi~Vpp~pgal 254 (358)
T PLN02515 182 EKEALT--KACVDMDQKVVVNYYPKCPQP--DLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGK---TWITVQPVEGAF 254 (358)
T ss_pred ChhhHH--HhhcCccceEEEeecCCCCCh--hhccCCCCCCCCCeEEEEecCCCCceEEEECCCC---eEEECCCCCCeE
Confidence 999998 566667788999999998643 5678999999999999999999999999986542 599999999999
Q ss_pred EEEeCchhhh
Q 024761 249 LCHFHFPALL 258 (263)
Q Consensus 249 vVNvGd~l~~ 258 (263)
|||+||+|+.
T Consensus 255 VVNiGD~L~~ 264 (358)
T PLN02515 255 VVNLGDHGHY 264 (358)
T ss_pred EEEccHHHHH
Confidence 9999999984
No 9
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=1.8e-56 Score=399.52 Aligned_cols=229 Identities=22% Similarity=0.386 Sum_probs=190.9
Q ss_pred CCcccEeeCCCc---c---hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccC-CCCcCc
Q 024761 14 HTVLHCIDLSSP---D---IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRN-EKHRGY 86 (263)
Q Consensus 14 ~~~iPvIDls~~---~---~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY 86 (263)
..+||||||+.. + +.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ..++||
T Consensus 38 ~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY 117 (361)
T PLN02276 38 ELAVPLIDLGGFLSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCGY 117 (361)
T ss_pred CCCCCeEEChhhcCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccc
Confidence 357999999842 1 345789999999999999999999999999999999999999999999998654 358899
Q ss_pred ccCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 024761 87 TPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALAL 166 (263)
Q Consensus 87 ~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~L 166 (263)
.+.+.+.. ....||+|.|.++......... ......+|.||. ..++||+.+++|+++|.+|+.+||++||++|
T Consensus 118 ~~~~~~~~----~~~~d~~E~~~~~~~~~~~~~~-~~~~~~~~~~p~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~L 190 (361)
T PLN02276 118 ASSHTGRF----SSKLPWKETLSFGYHADGGSSP-VVVDYFKSVLGE--DFEQFGKVYQEYCEAMKTLSLKIMELLGISL 190 (361)
T ss_pred CccCcccc----CCCCCeeeeEEEeccCcccccc-cchhcccccCCc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88765542 2246899999997532111100 001123578885 4678999999999999999999999999999
Q ss_pred CCCcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCC
Q 024761 167 DLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKG 246 (263)
Q Consensus 167 gl~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g 246 (263)
||++++|. ..+..+.+.||++|||+++.+ +..+|+++|||+|+||||+||+++||||+. +| +|++|+|+||
T Consensus 191 gl~~~~f~--~~~~~~~~~lrl~~YP~~~~~--~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~-~g----~Wi~V~p~pg 261 (361)
T PLN02276 191 GVDRGYYR--KFFEDGDSIMRCNYYPPCQEP--ELTLGTGPHCDPTSLTILHQDQVGGLQVFV-DN----KWRSVRPRPG 261 (361)
T ss_pred CCCHHHHH--HHhcCccceeeeEeCCCCCCc--ccccCCccccCCceeEEEEecCCCceEEEE-CC----EEEEcCCCCC
Confidence 99999998 667777889999999998653 567899999999999999999999999995 44 5999999999
Q ss_pred eEEEEeCchhhh
Q 024761 247 LVLCHFHFPALL 258 (263)
Q Consensus 247 ~lvVNvGd~l~~ 258 (263)
++|||+||+|+.
T Consensus 262 alVVNiGD~L~~ 273 (361)
T PLN02276 262 ALVVNIGDTFMA 273 (361)
T ss_pred eEEEEcHHHHHH
Confidence 999999999985
No 10
>PLN02216 protein SRG1
Probab=100.00 E-value=4.8e-56 Score=396.02 Aligned_cols=221 Identities=25% Similarity=0.459 Sum_probs=185.9
Q ss_pred CcccEeeCCCc---c-hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC-CCcCcccC
Q 024761 15 TVLHCIDLSSP---D-IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE-KHRGYTPL 89 (263)
Q Consensus 15 ~~iPvIDls~~---~-~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~~ 89 (263)
.+||||||+.. + +.+++++|++||++||||||+||||+.++++++++++++||+||.|+|+++.... .++||...
T Consensus 51 ~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~ 130 (357)
T PLN02216 51 SEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQA 130 (357)
T ss_pred CCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCcc
Confidence 57999999843 2 2457899999999999999999999999999999999999999999999986543 47888654
Q ss_pred cccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 024761 90 HDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLN 169 (263)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 169 (263)
.... .....||+|.|.++.. |. ....+|.||. .++.||+++++|+++|.+|+.+||++||++|||+
T Consensus 131 ~~~~----~~~~~d~~e~~~~~~~-----p~---~~~~~~~WP~--~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 196 (357)
T PLN02216 131 FVVS----EDQKLDWADMFFLTMQ-----PV---RLRKPHLFPK--LPLPFRDTLETYSAEVKSIAKILFAKMASALEIK 196 (357)
T ss_pred cccc----ccccCCceeeeeeecc-----Cc---ccccchhccc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3211 1234699999988632 11 1246899996 4689999999999999999999999999999999
Q ss_pred cccccCCccccC-CccceeeccCCCCCCCCCCCcceeccccccCceeEEEe-CCCCceeEeeCCCCCCCCeEEcCCCCCe
Q 024761 170 ADFFDKPEILGE-PIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLAT-DEVLGLQICKDKDAKPQIWEYVPPLKGL 247 (263)
Q Consensus 170 ~~~f~~~~~~~~-~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~~~GLqv~~~~g~~~~~W~~V~p~~g~ 247 (263)
+++|. +.+.. ..+.||++|||||+.+ +..+|+++|||+|+||||+| ++++||||+. +| +|++|+|+||+
T Consensus 197 ~~~f~--~~~~~~~~~~lRl~~YPp~p~~--~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~-~g----~Wi~V~p~pga 267 (357)
T PLN02216 197 PEEME--KLFDDDLGQSIRMNYYPPCPQP--DQVIGLTPHSDAVGLTILLQVNEVEGLQIKK-DG----KWVSVKPLPNA 267 (357)
T ss_pred HHHHH--HHhccCchheeEEeecCCCCCc--ccccCccCcccCceEEEEEecCCCCceeEEE-CC----EEEECCCCCCe
Confidence 99998 55655 4578999999998753 56789999999999999999 5799999985 44 59999999999
Q ss_pred EEEEeCchhhh
Q 024761 248 VLCHFHFPALL 258 (263)
Q Consensus 248 lvVNvGd~l~~ 258 (263)
+||||||+|+.
T Consensus 268 lvVNiGD~L~~ 278 (357)
T PLN02216 268 LVVNVGDILEI 278 (357)
T ss_pred EEEEcchhhHh
Confidence 99999999974
No 11
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=5.9e-56 Score=395.98 Aligned_cols=223 Identities=30% Similarity=0.503 Sum_probs=188.2
Q ss_pred CCCcccEeeCCCc---c---hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccC-CCCcC
Q 024761 13 AHTVLHCIDLSSP---D---IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRN-EKHRG 85 (263)
Q Consensus 13 ~~~~iPvIDls~~---~---~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G 85 (263)
+..+||||||+.. + +++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ..++|
T Consensus 49 ~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~G 128 (361)
T PLN02758 49 APDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQG 128 (361)
T ss_pred CCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCccc
Confidence 3457999999832 2 234589999999999999999999999999999999999999999999998754 34789
Q ss_pred cccCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 024761 86 YTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALA 165 (263)
Q Consensus 86 Y~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~ 165 (263)
|....... .....||+|.|.++.. +.. ...+|.||. .+++||+.+++|+++|.+|+.+||++|+++
T Consensus 129 Y~~~~~~~----~~~~~d~~e~~~~~~~-----p~~---~~~~~~WP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~ 194 (361)
T PLN02758 129 YGQAFVFS----EDQKLDWCNMFALGVE-----PHF---IRNPKLWPT--KPARFSETLEVYSREIRELCQRLLKYIAMT 194 (361)
T ss_pred cCcccccc----cccccCeeEEEEeecc-----Ccc---ccccccCcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 97543221 1234699999998743 111 125799997 467999999999999999999999999999
Q ss_pred CCCCcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCC--CCceeEeeCCCCCCCCeEEcCC
Q 024761 166 LDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDE--VLGLQICKDKDAKPQIWEYVPP 243 (263)
Q Consensus 166 Lgl~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~--~~GLqv~~~~g~~~~~W~~V~p 243 (263)
|||++++|. +.+..+.+.||++|||+|+.+ +..+|+++|||+|+||||+|++ ++||||+.+ | +|++|+|
T Consensus 195 Lgl~~~~f~--~~~~~~~~~lR~~~YP~~~~~--~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~~~-g----~Wi~V~p 265 (361)
T PLN02758 195 LGLKEDRFE--EMFGEAVQAVRMNYYPPCSRP--DLVLGLSPHSDGSALTVLQQGKGSCVGLQILKD-N----TWVPVHP 265 (361)
T ss_pred cCCChhhhH--HHhcCccceeeeecCCCCCCc--ccccCccCccCCceeEEEEeCCCCCCCeeeeeC-C----EEEeCCC
Confidence 999999998 667778889999999998654 5678999999999999999984 889999874 4 5999999
Q ss_pred CCCeEEEEeCchhhh
Q 024761 244 LKGLVLCHFHFPALL 258 (263)
Q Consensus 244 ~~g~lvVNvGd~l~~ 258 (263)
+||++|||+||+|+.
T Consensus 266 ~pgalVVNiGD~L~~ 280 (361)
T PLN02758 266 VPNALVINIGDTLEV 280 (361)
T ss_pred CCCeEEEEccchhhh
Confidence 999999999999984
No 12
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.5e-55 Score=390.18 Aligned_cols=220 Identities=22% Similarity=0.354 Sum_probs=183.2
Q ss_pred CCcccEeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC---CCcCcc
Q 024761 14 HTVLHCIDLSSP---DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE---KHRGYT 87 (263)
Q Consensus 14 ~~~iPvIDls~~---~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~GY~ 87 (263)
..+||||||+.. ++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ..+||.
T Consensus 39 ~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~~~ 118 (348)
T PLN02912 39 GDSIPLIDLRDLHGPNRADIINQFAHACSSYGFFQIKNHGVPEETIKKMMNVAREFFHQSESERVKHYSADTKKTTRLST 118 (348)
T ss_pred CCCCCeEECcccCCcCHHHHHHHHHHHHHHCCEEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHhHhhcCCCCcccccc
Confidence 457999999843 45667899999999999999999999999999999999999999999999953322 234444
Q ss_pred cCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024761 88 PLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALD 167 (263)
Q Consensus 88 ~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lg 167 (263)
.... ......+|+|.+.+... +.. ..+|.||. .+++||+++++|+++|.+|+.+||++||++||
T Consensus 119 ~~~~-----~~~~~~~~~e~~~~~~~-----~~~----~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~~il~~la~~Lg 182 (348)
T PLN02912 119 SFNV-----SKEKVSNWRDFLRLHCY-----PIE----DFIEEWPS--TPISFREVTAEYATSVRALVLTLLEAISESLG 182 (348)
T ss_pred cccc-----cccccCCchheEEEeec-----Ccc----cccccCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3321 11234689999887521 110 13789997 46899999999999999999999999999999
Q ss_pred CCcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCe
Q 024761 168 LNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGL 247 (263)
Q Consensus 168 l~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~ 247 (263)
|++++|. +.+....+.||++||||++.+ +..+|+++|||+|+||||+||+++||||+. +| +|++|+|+||+
T Consensus 183 l~~~~f~--~~~~~~~~~lrl~~YPp~~~~--~~~~G~~~HtD~g~lTlL~Qd~v~GLQV~~-~g----~Wi~V~p~pga 253 (348)
T PLN02912 183 LEKDRVS--NTLGKHGQHMAINYYPPCPQP--ELTYGLPGHKDANLITVLLQDEVSGLQVFK-DG----KWIAVNPIPNT 253 (348)
T ss_pred CCHHHHH--HHhcCccceeeeeecCCCCCh--hhcCCcCCCcCCCceEEEEECCCCceEEEE-CC----cEEECCCcCCe
Confidence 9999998 666677889999999998653 457899999999999999999999999995 44 59999999999
Q ss_pred EEEEeCchhhh
Q 024761 248 VLCHFHFPALL 258 (263)
Q Consensus 248 lvVNvGd~l~~ 258 (263)
+|||+||+|+.
T Consensus 254 lvVNiGD~L~~ 264 (348)
T PLN02912 254 FIVNLGDQMQV 264 (348)
T ss_pred EEEEcCHHHHH
Confidence 99999999974
No 13
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=3.9e-55 Score=391.09 Aligned_cols=222 Identities=21% Similarity=0.378 Sum_probs=185.0
Q ss_pred CCcccEeeCCCc------chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC---CCc
Q 024761 14 HTVLHCIDLSSP------DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE---KHR 84 (263)
Q Consensus 14 ~~~iPvIDls~~------~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~ 84 (263)
...||||||+.. .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... .++
T Consensus 45 ~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~ 124 (360)
T PLN03178 45 GPQVPVVDLSNIESDDEVVREACVEAVRAAAAEWGVMHLVGHGIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGAAQ 124 (360)
T ss_pred CCCCCEEEchhhcCCChhhHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCcc
Confidence 457999999832 14567899999999999999999999999999999999999999999999987542 478
Q ss_pred CcccCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024761 85 GYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIAL 164 (263)
Q Consensus 85 GY~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~ 164 (263)
||.....+. ..+..||+|.|... .. |.. ...+|.||. .+|+||+.+++|+++|.+|+.+||++||+
T Consensus 125 Gy~~~~~~~----~~~~~d~~e~~~~~-~~----p~~---~~~~n~wP~--~~p~fr~~~~~y~~~~~~l~~~ll~~la~ 190 (360)
T PLN03178 125 GYGSKLAAN----ASGQLEWEDYFFHL-TL----PED---KRDPSLWPK--TPPDYVPATSEYSRSLRSLATKLLAILSL 190 (360)
T ss_pred ccccccccc----cccccchhHhhccc-cC----Ccc---ccccccCCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 996543322 12346888887653 11 111 124789997 57899999999999999999999999999
Q ss_pred hCCCCcccccCCcccc---CCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEc
Q 024761 165 ALDLNADFFDKPEILG---EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYV 241 (263)
Q Consensus 165 ~Lgl~~~~f~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V 241 (263)
+|||++++|. +.+. ...+.||++|||+++.+ +..+|+++|||+|+||||+||+++||||+. +| +|++|
T Consensus 191 ~Lgl~~~~f~--~~~~~~~~~~~~lrl~~YP~~~~~--~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~-~g----~Wi~V 261 (360)
T PLN03178 191 GLGLPEDRLE--KEVGGLEELLLQMKINYYPRCPQP--DLALGVEAHTDVSALTFILHNMVPGLQVLY-EG----KWVTA 261 (360)
T ss_pred HcCCCHHHHH--HHhcCcccchhhhheeccCCCCCC--ccccCcCCccCCCceEEEeeCCCCceeEeE-CC----EEEEc
Confidence 9999999998 5554 34578999999998654 467899999999999999999999999996 44 59999
Q ss_pred CCCCCeEEEEeCchhhh
Q 024761 242 PPLKGLVLCHFHFPALL 258 (263)
Q Consensus 242 ~p~~g~lvVNvGd~l~~ 258 (263)
+|+||++||||||+|+.
T Consensus 262 ~p~pg~lvVNiGD~L~~ 278 (360)
T PLN03178 262 KCVPDSIVVHIGDTLEI 278 (360)
T ss_pred CCCCCeEEEEccHHHHH
Confidence 99999999999999984
No 14
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=6.5e-55 Score=384.82 Aligned_cols=222 Identities=24% Similarity=0.397 Sum_probs=182.0
Q ss_pred CCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCCCCcCcccCcccc
Q 024761 14 HTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDEL 93 (263)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~e~ 93 (263)
..+||||||++++ ..++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..+||.....
T Consensus 24 ~~~iPvIDls~~~---~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~-~~~Gy~~~~~-- 97 (335)
T PLN02156 24 PVLIPVIDLTDSD---AKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPP-DPFGYGTKRI-- 97 (335)
T ss_pred CCCCCcccCCChH---HHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCC-CCcccCcccc--
Confidence 4469999998642 367899999999999999999999999999999999999999999998644 3458853211
Q ss_pred cCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-cc
Q 024761 94 LDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNA-DF 172 (263)
Q Consensus 94 ~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~-~~ 172 (263)
. .....+|+|.|.+..+. .... ...+|.||. .+++||+++++|+++|.+|+.+||++||++||+++ ++
T Consensus 98 -~--~~~~~~~~e~~~~~~~~-----~~~~-~~~~~~wp~--~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~ 166 (335)
T PLN02156 98 -G--PNGDVGWLEYILLNANL-----CLES-HKTTAVFRH--TPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEK 166 (335)
T ss_pred -C--CCCCCCceeeEeeecCC-----cccc-ccchhcCcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHH
Confidence 1 11235899999887431 1111 113788996 45789999999999999999999999999999964 68
Q ss_pred ccCCcccc--CCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeEEE
Q 024761 173 FDKPEILG--EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLVLC 250 (263)
Q Consensus 173 f~~~~~~~--~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~lvV 250 (263)
|. +.+. ...+.||++|||+++....+..+|+++|||+|+||||+||+++||||+.++| +|++|+|+||++||
T Consensus 167 f~--~~~~~~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~g----~Wi~Vpp~pga~VV 240 (335)
T PLN02156 167 LS--KLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICVKDG----TWVDVPPDHSSFFV 240 (335)
T ss_pred HH--HHhcCCCccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEeCCC----CEEEccCCCCcEEE
Confidence 87 4443 3467899999999875433467899999999999999999999999987665 49999999999999
Q ss_pred EeCchhhh
Q 024761 251 HFHFPALL 258 (263)
Q Consensus 251 NvGd~l~~ 258 (263)
|+||+|+.
T Consensus 241 NiGD~l~~ 248 (335)
T PLN02156 241 LVGDTLQV 248 (335)
T ss_pred EhHHHHHH
Confidence 99999984
No 15
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=5.3e-55 Score=384.12 Aligned_cols=217 Identities=25% Similarity=0.425 Sum_probs=181.9
Q ss_pred CCCcccEeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCCCCcCcccC
Q 024761 13 AHTVLHCIDLSSP---DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPL 89 (263)
Q Consensus 13 ~~~~iPvIDls~~---~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~ 89 (263)
.+++||||||+.. ++.+++++|++||++||||||+|||||.++++++++++++||+||.|+|+++.. ..+||.+.
T Consensus 3 ~~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~--~~~gy~~~ 80 (321)
T PLN02299 3 KMESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMV--ASKGLEGV 80 (321)
T ss_pred CCCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhccc--CCCCcccc
Confidence 3566999999843 345678999999999999999999999999999999999999999999999753 24788765
Q ss_pred cccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 024761 90 HDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLN 169 (263)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 169 (263)
+.+. ...||+|.|.++.. +. ...|.||. .+++||+++++|+++|.+|+.+||++||++||++
T Consensus 81 ~~~~------~~~d~ke~~~~~~~-----~~-----~~~~~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 142 (321)
T PLN02299 81 QTEV------EDLDWESTFFLRHL-----PE-----SNLADIPD--LDDEYRKVMKDFALELEKLAEELLDLLCENLGLE 142 (321)
T ss_pred cccC------CCcCHHHHcccccC-----Cc-----cccccCcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4332 23689999988621 11 13577996 4689999999999999999999999999999999
Q ss_pred cccccCCcccc---CCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeC-CCCceeEeeCCCCCCCCeEEcCCCC
Q 024761 170 ADFFDKPEILG---EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATD-EVLGLQICKDKDAKPQIWEYVPPLK 245 (263)
Q Consensus 170 ~~~f~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqv~~~~g~~~~~W~~V~p~~ 245 (263)
+++|. +.+. .+.+.||++||||++.+ +..+|+++|||+|+||||+|| +++||||+. +| +|++|+|.|
T Consensus 143 ~~~f~--~~~~~~~~~~~~lRl~~YPp~~~~--~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~-~g----~Wi~V~p~p 213 (321)
T PLN02299 143 KGYLK--KAFHGSKGPTFGTKVSNYPPCPKP--DLVKGLRAHTDAGGIILLFQDDKVSGLQLLK-DG----EWVDVPPMR 213 (321)
T ss_pred HHHHH--HHhcCCCCccceeeeEecCCCCCc--ccccCccCccCCCeEEEEEecCCCCCcCccc-CC----eEEECCCCC
Confidence 99997 4443 24568999999998754 356799999999999999997 599999984 45 599999999
Q ss_pred CeEEEEeCchhhh
Q 024761 246 GLVLCHFHFPALL 258 (263)
Q Consensus 246 g~lvVNvGd~l~~ 258 (263)
|++|||+||+|+.
T Consensus 214 g~lvVNiGD~l~~ 226 (321)
T PLN02299 214 HSIVVNLGDQLEV 226 (321)
T ss_pred CeEEEEeCHHHHH
Confidence 9999999999974
No 16
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=9.6e-55 Score=385.60 Aligned_cols=220 Identities=28% Similarity=0.456 Sum_probs=184.4
Q ss_pred CCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC---CCcCcccCc
Q 024761 14 HTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE---KHRGYTPLH 90 (263)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~GY~~~~ 90 (263)
..+||||||+..++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... ..++|...+
T Consensus 35 ~~~iPvIDls~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~~~~~~~~~~~~ 114 (337)
T PLN02639 35 CENVPVIDLGSPDRAQVVQQIGDACRRYGFFQVINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSDDPTKTMRLSTSFN 114 (337)
T ss_pred CCCCCeEECCCccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCccccccccc
Confidence 45799999998777778999999999999999999999999999999999999999999999975432 133443322
Q ss_pred ccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Q 024761 91 DELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNA 170 (263)
Q Consensus 91 ~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 170 (263)
.. .....+|+|.|.+... |.. ..+|.||. .+|+|++.+++|+++|.+|+.+||++||++|||++
T Consensus 115 ~~-----~~~~~~~~e~~~~~~~-----p~~----~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 178 (337)
T PLN02639 115 VR-----KEKVHNWRDYLRLHCY-----PLD----KYVPEWPS--NPPSFKEIVSTYCREVRELGFRLQEAISESLGLEK 178 (337)
T ss_pred cc-----cCcccCchheEEeeec-----CCc----ccchhCcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 11 1234589999887521 111 13688997 46899999999999999999999999999999999
Q ss_pred ccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeC-CCCceeEeeCCCCCCCCeEEcCCCCCeEE
Q 024761 171 DFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATD-EVLGLQICKDKDAKPQIWEYVPPLKGLVL 249 (263)
Q Consensus 171 ~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqv~~~~g~~~~~W~~V~p~~g~lv 249 (263)
++|+ ..+....+.||++|||+++.+ +..+|+++|||+|+||||+|| +++||||+. +| +|++|+|+||++|
T Consensus 179 ~~f~--~~~~~~~~~lrl~~YP~~~~~--~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~-~g----~Wi~V~p~pg~lV 249 (337)
T PLN02639 179 DYIK--NVLGEQGQHMAVNYYPPCPEP--ELTYGLPAHTDPNALTILLQDQQVAGLQVLK-DG----KWVAVNPHPGAFV 249 (337)
T ss_pred HHHH--HHhCCCccEEEEEcCCCCCCc--ccccCCCCCcCCCceEEEEecCCcCceEeec-CC----eEEeccCCCCeEE
Confidence 9998 666677789999999998653 567899999999999999998 499999985 44 5999999999999
Q ss_pred EEeCchhhh
Q 024761 250 CHFHFPALL 258 (263)
Q Consensus 250 VNvGd~l~~ 258 (263)
||+||+|+.
T Consensus 250 VNiGD~L~~ 258 (337)
T PLN02639 250 INIGDQLQA 258 (337)
T ss_pred EechhHHHH
Confidence 999999984
No 17
>PLN02704 flavonol synthase
Probab=100.00 E-value=9.5e-55 Score=385.35 Aligned_cols=223 Identities=26% Similarity=0.394 Sum_probs=184.8
Q ss_pred CCCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC---CCcCcccC
Q 024761 13 AHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE---KHRGYTPL 89 (263)
Q Consensus 13 ~~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~GY~~~ 89 (263)
+..+||||||+.+++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.... .++||...
T Consensus 39 ~~~~iPvIDls~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~ 118 (335)
T PLN02704 39 VDPQVPTIDLSDPDEEKLTRLIAEASKEWGMFQIVNHGIPSEVISKLQKVGKEFFELPQEEKEVYAKPPDSKSIEGYGTK 118 (335)
T ss_pred cCCCCCeEECCCccHHHHHHHHHHHHHHcCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCccccccccc
Confidence 345799999998777778999999999999999999999999999999999999999999999987542 36899754
Q ss_pred cccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 024761 90 HDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLN 169 (263)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 169 (263)
..+.. ....+++|.+..... +.. ...+|.||. .+|+||+.+++|+++|.+|+.+||++|+++||++
T Consensus 119 ~~~~~----~~~~~~~d~~~~~~~-----p~~---~~~~n~wP~--~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 184 (335)
T PLN02704 119 LQKEP----EGKKAWVDHLFHRIW-----PPS---AINYQFWPK--NPPSYREVNEEYAKYLRGVADKLFKTLSLGLGLE 184 (335)
T ss_pred ccccc----cCcccceeeeEeeec-----CCc---ccchhhCcc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 33221 233567776654211 110 123689997 4689999999999999999999999999999999
Q ss_pred cccccCCccccC--CccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCe
Q 024761 170 ADFFDKPEILGE--PIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGL 247 (263)
Q Consensus 170 ~~~f~~~~~~~~--~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~ 247 (263)
+++|. ..+.. ..+.||++||||++.+ +..+|+++|||+|+||||+||+++||||+. +| +|++|+|.||+
T Consensus 185 ~~~f~--~~~~~~~~~~~lrl~~YP~~~~~--~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~-~g----~Wi~V~p~pg~ 255 (335)
T PLN02704 185 EDELK--EAVGGEELEYLLKINYYPPCPRP--DLALGVVAHTDMSAITILVPNEVQGLQVFR-DD----HWFDVKYIPNA 255 (335)
T ss_pred HHHHH--HHhcCCchhhhhhhhcCCCCCCc--ccccCccCccCCcceEEEecCCCCceeEeE-CC----EEEeCCCCCCe
Confidence 99998 44443 3468999999998653 467899999999999999999999999985 44 59999999999
Q ss_pred EEEEeCchhhh
Q 024761 248 VLCHFHFPALL 258 (263)
Q Consensus 248 lvVNvGd~l~~ 258 (263)
+|||+||+|+.
T Consensus 256 lvVNvGD~L~~ 266 (335)
T PLN02704 256 LVIHIGDQIEI 266 (335)
T ss_pred EEEEechHHHH
Confidence 99999999984
No 18
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.6e-54 Score=385.02 Aligned_cols=223 Identities=28% Similarity=0.414 Sum_probs=182.9
Q ss_pred CCCcccEeeCCCc-----chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC-CCcCc
Q 024761 13 AHTVLHCIDLSSP-----DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE-KHRGY 86 (263)
Q Consensus 13 ~~~~iPvIDls~~-----~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY 86 (263)
..++||||||+.. ++++.+++|++||++||||||+||||+.++++++++.+++||+||.|+|+++.... .++||
T Consensus 41 ~~~~IPvIDls~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY 120 (348)
T PLN00417 41 PEMDIPAIDLSLLLSSSDDGREELSKLHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKQKCAREIGSIQGY 120 (348)
T ss_pred cCCCCCeEEChhhcCCCchHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCcccc
Confidence 3458999999832 23445789999999999999999999999999999999999999999999987643 47899
Q ss_pred ccCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 024761 87 TPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALAL 166 (263)
Q Consensus 87 ~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~L 166 (263)
.+... .......|++|.|+++.. +.. ...+|.||. .+++||+++++|+++|.+|+.+||++||++|
T Consensus 121 ~~~~~----~~~~~~~d~~e~~~~~~~-----p~~---~~~~n~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~L 186 (348)
T PLN00417 121 GNDMI----LSDDQVLDWIDRLYLTTY-----PED---QRQLKFWPQ--VPVGFRETLHEYTMKQRLVIEKFFKAMARSL 186 (348)
T ss_pred ccccc----cccCCCcCccceeecccC-----Ccc---ccccccccc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 64211 111234688998877521 111 124689997 4689999999999999999999999999999
Q ss_pred CCCcccccCCccccC-CccceeeccCCCCCCCCCCCcceeccccccCceeEEEeC-CCCceeEeeCCCCCCCCeEEcCCC
Q 024761 167 DLNADFFDKPEILGE-PIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATD-EVLGLQICKDKDAKPQIWEYVPPL 244 (263)
Q Consensus 167 gl~~~~f~~~~~~~~-~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqv~~~~g~~~~~W~~V~p~ 244 (263)
||++++|. ..+.. ..+.||++||||++.+ +..+|+++|||+|+||||+|| +++||||+. +| +|++|+|+
T Consensus 187 Gl~~~~f~--~~~~~~~~~~lRl~~YPp~~~~--~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~-~g----~Wi~V~p~ 257 (348)
T PLN00417 187 ELEENCFL--EMYGENATMDTRFNMYPPCPRP--DKVIGVKPHADGSAFTLLLPDKDVEGLQFLK-DG----KWYKAPIV 257 (348)
T ss_pred CCCHHHHH--HHhccCccceeeeeecCCCCCc--ccccCCcCccCCCceEEEEecCCCCceeEeE-CC----eEEECCCC
Confidence 99999997 44444 3467999999998653 467899999999999999997 699999985 45 59999999
Q ss_pred CCeEEEEeCchhhh
Q 024761 245 KGLVLCHFHFPALL 258 (263)
Q Consensus 245 ~g~lvVNvGd~l~~ 258 (263)
||++||||||+|+.
T Consensus 258 pg~lVVNiGD~Le~ 271 (348)
T PLN00417 258 PDTILINVGDQMEI 271 (348)
T ss_pred CCcEEEEcChHHHH
Confidence 99999999999974
No 19
>PLN02947 oxidoreductase
Probab=100.00 E-value=1.8e-54 Score=387.24 Aligned_cols=222 Identities=24% Similarity=0.366 Sum_probs=182.1
Q ss_pred CCCcccEeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccC--CCCcCcc
Q 024761 13 AHTVLHCIDLSSP---DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRN--EKHRGYT 87 (263)
Q Consensus 13 ~~~~iPvIDls~~---~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~~GY~ 87 (263)
...+||||||+.. ++.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... ....||.
T Consensus 63 ~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg 142 (374)
T PLN02947 63 GNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYG 142 (374)
T ss_pred CCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeec
Confidence 4457999999853 3566799999999999999999999999999999999999999999999998543 2345664
Q ss_pred cCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024761 88 PLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALD 167 (263)
Q Consensus 88 ~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lg 167 (263)
..... ......+|+|.+.+... |.. ..+|.||. .+++||+++++|+++|.+|+.+||++||++||
T Consensus 143 ~~~~~----~~~~~~~~~e~~~~~~~-----p~~----~~~~~WP~--~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lg 207 (374)
T PLN02947 143 TSFNQ----NKDAVFCWRDFLKLVCH-----PLS----DVLPHWPS--SPADLRKVAATYAKATKRLFLELMEAILESLG 207 (374)
T ss_pred ccccc----ccccccCceeceeeecC-----Ccc----cccccCcc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 32111 11234688998876521 211 12688997 46899999999999999999999999999999
Q ss_pred CCc---ccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCC
Q 024761 168 LNA---DFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPL 244 (263)
Q Consensus 168 l~~---~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~ 244 (263)
|++ ++|. ..+....+.+|++|||||+.+ +..+|+++|||+|+||||+||+++||||++ +| +|++|+|+
T Consensus 208 l~~~~~~~~~--~~~~~~~~~lrln~YPp~p~~--~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~-~g----~Wi~V~p~ 278 (374)
T PLN02947 208 IVKRGSDELL--EEFEAGSQMMVVNCYPACPEP--ELTLGMPPHSDYGFLTLLLQDEVEGLQIMH-AG----RWVTVEPI 278 (374)
T ss_pred CCccchHHHH--HHhcCcceeeeeecCCCCCCc--ccccCCCCccCCCceEEEEecCCCCeeEeE-CC----EEEeCCCC
Confidence 974 4555 445567789999999998754 567899999999999999999999999998 44 59999999
Q ss_pred CCeEEEEeCchhhh
Q 024761 245 KGLVLCHFHFPALL 258 (263)
Q Consensus 245 ~g~lvVNvGd~l~~ 258 (263)
||++||||||+|+.
T Consensus 279 pga~VVNvGD~Lq~ 292 (374)
T PLN02947 279 PGSFVVNVGDHLEI 292 (374)
T ss_pred CCeEEEEeCceeee
Confidence 99999999999974
No 20
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=2e-54 Score=386.47 Aligned_cols=222 Identities=29% Similarity=0.497 Sum_probs=185.5
Q ss_pred CCCcccEeeCCCc---c---hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC-CCcC
Q 024761 13 AHTVLHCIDLSSP---D---IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE-KHRG 85 (263)
Q Consensus 13 ~~~~iPvIDls~~---~---~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~G 85 (263)
+.++||||||+.. + +.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... .++|
T Consensus 48 ~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~G 127 (362)
T PLN02393 48 AEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYANSPATYEG 127 (362)
T ss_pred cCCCCCeEECccccCCChHHHHHHHHHHHHHHHHCcEEEEEeCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcccCcccc
Confidence 4468999999843 2 3567999999999999999999999999999999999999999999999987543 4789
Q ss_pred cc-cCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024761 86 YT-PLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIAL 164 (263)
Q Consensus 86 Y~-~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~ 164 (263)
|. ..+.+. ....||+|.|+++.. +. ....+|.||. .+++|++++++|+++|.+++.+||++||+
T Consensus 128 y~~~~~~~~-----~~~~d~~e~~~~~~~-----~~---~~~~~n~wP~--~~~~fr~~~~~y~~~~~~la~~ll~~la~ 192 (362)
T PLN02393 128 YGSRLGVEK-----GAILDWSDYYFLHYL-----PS---SLKDPNKWPS--LPPSCRELIEEYGEEVVKLCGRLMKVLSV 192 (362)
T ss_pred ccccccccc-----ccccCchhheeeeec-----Cc---cccchhhCcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 94 333322 234689999887632 11 1235789997 46899999999999999999999999999
Q ss_pred hCCCCcccccCCccccC---CccceeeccCCCCCCCCCCCcceeccccccCceeEEEeC-CCCceeEeeCCCCCCCCeEE
Q 024761 165 ALDLNADFFDKPEILGE---PIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATD-EVLGLQICKDKDAKPQIWEY 240 (263)
Q Consensus 165 ~Lgl~~~~f~~~~~~~~---~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqv~~~~g~~~~~W~~ 240 (263)
+||+++++|. +.+.. +.+.||++|||+++.+ +..+|+++|||+|+||||+|+ +++||||+. +| +|++
T Consensus 193 ~Lgl~~~~f~--~~~~~~~~~~~~lRl~~YP~~p~~--~~~~g~~~HtD~g~lTlL~q~~~v~GLQV~~-~g----~W~~ 263 (362)
T PLN02393 193 NLGLEEDRLQ--NAFGGEDGVGACLRVNYYPKCPQP--DLTLGLSPHSDPGGMTILLPDDNVAGLQVRR-DD----AWIT 263 (362)
T ss_pred HcCCCHHHHH--HHhCCCccccceeeeeecCCCCCc--ccccccccccCCceEEEEeeCCCCCcceeeE-CC----EEEE
Confidence 9999999998 44443 2378999999998653 467899999999999999985 689999994 44 4999
Q ss_pred cCCCCCeEEEEeCchhhh
Q 024761 241 VPPLKGLVLCHFHFPALL 258 (263)
Q Consensus 241 V~p~~g~lvVNvGd~l~~ 258 (263)
|+|.||++|||+||+|+.
T Consensus 264 V~p~pgalVVNiGD~l~~ 281 (362)
T PLN02393 264 VKPVPDAFIVNIGDQIQV 281 (362)
T ss_pred CCCCCCeEEEEcchhhHh
Confidence 999999999999999985
No 21
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4e-54 Score=380.64 Aligned_cols=223 Identities=22% Similarity=0.345 Sum_probs=177.4
Q ss_pred CCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCCC----CcCcccC
Q 024761 14 HTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEK----HRGYTPL 89 (263)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~----~~GY~~~ 89 (263)
..+||+|||+.. .+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++..... ..||.+.
T Consensus 36 ~~~IPvIDls~~----~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~~~g~~~~ 111 (341)
T PLN02984 36 DIDIPVIDMECL----DMEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSYFWGTPAL 111 (341)
T ss_pred cCCCCeEeCcHH----HHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCccccCcccc
Confidence 456999999865 25799999999999999999999999999999999999999999999752221 2233222
Q ss_pred ccccc---CCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 024761 90 HDELL---DPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALAL 166 (263)
Q Consensus 90 ~~e~~---~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~L 166 (263)
..+.. ........|++|.|.++... ... + .+.||.++.+|+||+++++|+++|.+|+.+||++||++|
T Consensus 112 ~~~~~~~~~~~~~~~~D~kE~f~~~~~~-----~~~--~--~~~p~~~~~~p~fr~~~~~y~~~~~~La~~ll~~lA~~L 182 (341)
T PLN02984 112 TPSGKALSRGPQESNVNWVEGFNIPLSS-----LSL--L--QTLSCSDPKLESFRVLMEEYGKHLTRIAVTLFEAIAKTL 182 (341)
T ss_pred cccccccccccccCCCCeeeEEeCcCCc-----hhh--h--hhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11111 11011246999999997421 000 0 111222224689999999999999999999999999999
Q ss_pred CCC--cccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCC
Q 024761 167 DLN--ADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPL 244 (263)
Q Consensus 167 gl~--~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~ 244 (263)
|++ +++|. ..+..+.+.||++||||++.+ +..+|+++|||+|+||||+||+++||||+. +| +|++|+|+
T Consensus 183 gl~~~~~~f~--~~~~~~~~~lRl~~YPp~~~~--~~~~g~~aHTD~g~lTlL~Qd~v~GLQV~~-~g----~Wv~V~p~ 253 (341)
T PLN02984 183 SLELSGDQKM--SYLSESTGVIRVYRYPQCSNE--AEAPGMEVHTDSSVISILNQDEVGGLEVMK-DG----EWFNVKPI 253 (341)
T ss_pred CCCcchhHHH--HHhcCccceEEEEeCCCCCCc--ccccCccCccCCCceEEEEeCCCCCeeEee-CC----ceEECCCC
Confidence 999 99998 677777889999999998653 467899999999999999999999999985 44 59999999
Q ss_pred CCeEEEEeCchhhh
Q 024761 245 KGLVLCHFHFPALL 258 (263)
Q Consensus 245 ~g~lvVNvGd~l~~ 258 (263)
||++|||+||+|+.
T Consensus 254 pgalVVNiGD~Le~ 267 (341)
T PLN02984 254 ANTLVVNLGDMMQV 267 (341)
T ss_pred CCeEEEECChhhhh
Confidence 99999999999974
No 22
>PLN02904 oxidoreductase
Probab=100.00 E-value=7.3e-54 Score=381.70 Aligned_cols=221 Identities=25% Similarity=0.417 Sum_probs=180.6
Q ss_pred CCcccEeeCCCc----chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC--CCcCcc
Q 024761 14 HTVLHCIDLSSP----DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE--KHRGYT 87 (263)
Q Consensus 14 ~~~iPvIDls~~----~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~GY~ 87 (263)
...||||||+.. .+.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ...||.
T Consensus 49 ~~~iPvIDls~~~~~~~r~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~g 128 (357)
T PLN02904 49 TITLPVIDLSLLHDPLLRSCVIHEIEMACKGFGFFQVINHGIPSSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPVRYG 128 (357)
T ss_pred CCCCCEEECcccCCchhHHHHHHHHHHHHHHCceEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCccccc
Confidence 357999999842 23557899999999999999999999999999999999999999999999986432 223442
Q ss_pred cCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024761 88 PLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALD 167 (263)
Q Consensus 88 ~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lg 167 (263)
.+. ........+|+|.+..... +.. ..+|.||. .+|+||+++++|+++|.+|+.+||++||++||
T Consensus 129 ---~~~-~~~~~~~~~~~d~~~~~~~-----p~~----~~~n~WP~--~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 193 (357)
T PLN02904 129 ---TSL-NHSTDRVHYWRDFIKHYSH-----PLS----KWINLWPS--NPPCYKEKVGKYAEATHVLHKQLIEAISESLG 193 (357)
T ss_pred ---ccc-cccCCCCCCceEEeeeccC-----Ccc----cccccCcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 221 1111223467776654311 111 13689996 46899999999999999999999999999999
Q ss_pred CCcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCe
Q 024761 168 LNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGL 247 (263)
Q Consensus 168 l~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~ 247 (263)
|++++|. ..+....+.||++|||||+.+ +..+|+++|||+|+||||+|+ ++||||+.++| +|++|+|+||+
T Consensus 194 l~~~~f~--~~~~~~~~~lrl~~YPp~p~~--~~~~g~~~HtD~g~lTlL~qd-~~GLQV~~~~g----~Wi~V~p~pga 264 (357)
T PLN02904 194 LEKNYLQ--EEIEEGSQVMAVNCYPACPEP--EIALGMPPHSDFGSLTILLQS-SQGLQIMDCNK----NWVCVPYIEGA 264 (357)
T ss_pred CCHHHHH--HHhcCcccEEEeeecCCCCCc--ccccCCcCccCCCceEEEecC-CCeeeEEeCCC----CEEECCCCCCe
Confidence 9999998 666777789999999998653 468899999999999999997 58999998766 49999999999
Q ss_pred EEEEeCchhhh
Q 024761 248 VLCHFHFPALL 258 (263)
Q Consensus 248 lvVNvGd~l~~ 258 (263)
+||||||+|+.
T Consensus 265 lVVNiGD~Le~ 275 (357)
T PLN02904 265 LIVQLGDQVEV 275 (357)
T ss_pred EEEEccHHHHH
Confidence 99999999985
No 23
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=8.2e-54 Score=373.99 Aligned_cols=214 Identities=27% Similarity=0.387 Sum_probs=176.3
Q ss_pred CCCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCCCCcCcccCccc
Q 024761 13 AHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDE 92 (263)
Q Consensus 13 ~~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~e 92 (263)
+...||||||+... +.+++|++||++||||||+||||+.++++++++++++||+||.|+|+++......+||.+.+.+
T Consensus 2 ~~~~iPvIDls~~~--~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~GY~~~~~~ 79 (300)
T PLN02365 2 AEVNIPTIDLEEFP--GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSGYMAPSEV 79 (300)
T ss_pred CcCCCCEEEChhhH--HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCCCCCCCCCCcCCC
Confidence 44679999999763 2368999999999999999999999999999999999999999999997654457899865322
Q ss_pred ccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-Cc
Q 024761 93 LLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAP-DILPGWRETMDRFHQEALEVAKVVARIIALALDL-NA 170 (263)
Q Consensus 93 ~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~-~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl-~~ 170 (263)
.+++|.|.+..... +. .++.||.. +.+|+||+.+++|+++|.+|+.+||++||++||| ++
T Consensus 80 ---------~~~~e~~~~~~~~~---~~------~~~~~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 141 (300)
T PLN02365 80 ---------NPLYEALGLYDMAS---PQ------AVDTFCSQLDASPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEG 141 (300)
T ss_pred ---------CCchhheecccccC---ch------hhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 36889888762110 10 11223321 1357999999999999999999999999999999 88
Q ss_pred ccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCC-CCceeEeeC-CCCCCCCeEEcCCCCCeE
Q 024761 171 DFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDE-VLGLQICKD-KDAKPQIWEYVPPLKGLV 248 (263)
Q Consensus 171 ~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~-~~GLqv~~~-~g~~~~~W~~V~p~~g~l 248 (263)
++|. .. .+.||++|||+++.. +..+|+++|||+|+||||+||+ ++||||+++ +| +|++|+|+||++
T Consensus 142 ~~f~--~~----~~~lr~~~YP~~p~~--~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g----~Wi~V~p~pga~ 209 (300)
T PLN02365 142 DFFQ--GW----PSQFRINKYNFTPET--VGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSG----EFVPVDPLPGTL 209 (300)
T ss_pred HHHh--hc----ccceeeeecCCCCCc--cccccccCccCCCceEEEecCCCcCceEEEECCCC----eEEecCCCCCeE
Confidence 8887 32 478999999998653 5678999999999999999984 999999986 55 599999999999
Q ss_pred EEEeCchhhh
Q 024761 249 LCHFHFPALL 258 (263)
Q Consensus 249 vVNvGd~l~~ 258 (263)
|||+||+|+.
T Consensus 210 vVNiGD~l~~ 219 (300)
T PLN02365 210 LVNLGDVATA 219 (300)
T ss_pred EEEhhHHHHH
Confidence 9999999984
No 24
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=2.2e-53 Score=372.86 Aligned_cols=224 Identities=34% Similarity=0.573 Sum_probs=188.0
Q ss_pred CCCcccEeeCCCcc-----hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC-CCcCc
Q 024761 13 AHTVLHCIDLSSPD-----IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE-KHRGY 86 (263)
Q Consensus 13 ~~~~iPvIDls~~~-----~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY 86 (263)
...+||||||+... +.+++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++.+.. .+.||
T Consensus 14 ~~~~iPvIDls~~~~~~~~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~~~~~gY 93 (322)
T KOG0143|consen 14 SELDIPVIDLSCLDSDDPGREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEPGKYRGY 93 (322)
T ss_pred cCCCcCeEECCCCCCcchhHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCCCCcccc
Confidence 45689999999432 4667899999999999999999999999999999999999999999999998876 57899
Q ss_pred ccCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 024761 87 TPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALAL 166 (263)
Q Consensus 87 ~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~L 166 (263)
....... .....+|.+.+.+... |.. ...++.||+ .++.||+++++|.+++.+|+.+|+++++++|
T Consensus 94 ~~~~~~~----~~~~~~w~d~~~~~~~-----p~~---~~~~~~wp~--~p~~~re~~~eY~~~~~~L~~~l~~~l~esl 159 (322)
T KOG0143|consen 94 GTSFILS----PLKELDWRDYLTLLSA-----PES---SFDPNLWPE--GPPEFRETMEEYAKEVMELSEKLLRLLSESL 159 (322)
T ss_pred ccccccc----ccccccchhheeeecc-----Ccc---ccCcccCcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7554321 1234678888876422 111 135778997 6789999999999999999999999999999
Q ss_pred CCCcccccCCccccC-CccceeeccCCCCCCCCCCCcceeccccccCceeEEEeC-CCCceeEeeCCCCCCCCeEEcCCC
Q 024761 167 DLNADFFDKPEILGE-PIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATD-EVLGLQICKDKDAKPQIWEYVPPL 244 (263)
Q Consensus 167 gl~~~~f~~~~~~~~-~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqv~~~~g~~~~~W~~V~p~ 244 (263)
|++.+++. ..++. ..+.||+||||||+.+ +.++|+++|||.++||||+|| +++||||.+.+| +|++|+|+
T Consensus 160 gl~~~~~~--~~~~~~~~~~~r~n~Yp~cp~p--e~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg----~Wi~V~P~ 231 (322)
T KOG0143|consen 160 GLEPEYLE--KLFGETGGQVMRLNYYPPCPEP--ELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDG----KWIDVPPI 231 (322)
T ss_pred CCChHHHH--HhhCCccceEEEEeecCCCcCc--cccccccCccCcCceEEEEccCCcCceEEEecCC----eEEECCCC
Confidence 99976555 45555 4669999999999864 689999999999999999998 899999996344 59999999
Q ss_pred CCeEEEEeCchhhh
Q 024761 245 KGLVLCHFHFPALL 258 (263)
Q Consensus 245 ~g~lvVNvGd~l~~ 258 (263)
||++||||||+||.
T Consensus 232 p~a~vVNiGD~l~~ 245 (322)
T KOG0143|consen 232 PGAFVVNIGDMLQI 245 (322)
T ss_pred CCCEEEEcccHHhH
Confidence 99999999999985
No 25
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=1.3e-52 Score=365.68 Aligned_cols=213 Identities=25% Similarity=0.407 Sum_probs=173.6
Q ss_pred cccEeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCCCCcCcccCccc
Q 024761 16 VLHCIDLSSP---DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDE 92 (263)
Q Consensus 16 ~iPvIDls~~---~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~e 92 (263)
+||||||+.. ++.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|.. .. ....++...+
T Consensus 2 ~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~~-~~-~~~~~~~~~~-- 77 (303)
T PLN02403 2 EIPVIDFDQLDGEKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESFY-ES-EIAKALDNEG-- 77 (303)
T ss_pred CCCeEeCccCCcccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHhh-cc-cccCcccccC--
Confidence 6999999853 345679999999999999999999999999999999999999999999862 11 1111221111
Q ss_pred ccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Q 024761 93 LLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADF 172 (263)
Q Consensus 93 ~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 172 (263)
.....||+|.|.++.. |. ...|.||+ .+|+||+++++|+++|.+|+.+||+++|++|||++++
T Consensus 78 -----~~~~~d~kE~~~~~~~-----p~-----~~~~~wP~--~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 140 (303)
T PLN02403 78 -----KTSDVDWESSFFIWHR-----PT-----SNINEIPN--LSEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDY 140 (303)
T ss_pred -----CCCCccHhhhcccccC-----Cc-----cchhhCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 1224699999998732 21 24688996 4689999999999999999999999999999999999
Q ss_pred ccCCcccc---CCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeC-CCCceeEeeCCCCCCCCeEEcCCCC-Ce
Q 024761 173 FDKPEILG---EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATD-EVLGLQICKDKDAKPQIWEYVPPLK-GL 247 (263)
Q Consensus 173 f~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqv~~~~g~~~~~W~~V~p~~-g~ 247 (263)
|. +.+. .+.+.||++|||+++.+ +..+|+++|||+|+||||+|+ +++||||+. +| +|++|+|+| |+
T Consensus 141 f~--~~~~~~~~~~~~lrl~~YP~~~~~--~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~-~g----~Wi~V~p~p~~~ 211 (303)
T PLN02403 141 IK--EAFSGNKGPSVGTKVAKYPECPRP--ELVRGLREHTDAGGIILLLQDDQVPGLEFLK-DG----KWVPIPPSKNNT 211 (303)
T ss_pred HH--HHhccCCCccceeeeEcCCCCCCc--ccccCccCccCCCeEEEEEecCCCCceEecc-CC----eEEECCCCCCCE
Confidence 97 4454 33456999999998643 456799999999999999997 599999974 44 599999999 69
Q ss_pred EEEEeCchhhh
Q 024761 248 VLCHFHFPALL 258 (263)
Q Consensus 248 lvVNvGd~l~~ 258 (263)
+|||+||+|+.
T Consensus 212 lvVNvGD~L~~ 222 (303)
T PLN02403 212 IFVNTGDQLEV 222 (303)
T ss_pred EEEEehHHHHH
Confidence 99999999974
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=5.3e-42 Score=293.27 Aligned_cols=179 Identities=24% Similarity=0.382 Sum_probs=146.3
Q ss_pred HHHHhhHhcC-CCHHHHhhhccCC---CCcCcccCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCC
Q 024761 59 VFTQSKRFFN-LPLNEKIKVLRNE---KHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAP 134 (263)
Q Consensus 59 ~~~~~~~fF~-lp~e~K~~~~~~~---~~~GY~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~ 134 (263)
|.+.+++||+ ||.|+|+++.... .++||.....+. .......||+|.|.+... |.. ...+|.||.
T Consensus 1 ~~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~--~~~~~~~d~kE~~~~~~~-----p~~---~~~~n~wP~- 69 (262)
T PLN03001 1 MRSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLG--AKDDTVLDWRDFFDHHTF-----PLS---RRNPSHWPD- 69 (262)
T ss_pred ChHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccc--cCCCCccCchheeEeeec-----Ccc---ccchhhCCC-
Confidence 3578999997 9999999987653 378995432221 112234699999998521 111 124799997
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCce
Q 024761 135 DILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLI 214 (263)
Q Consensus 135 ~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~l 214 (263)
.+|+|++++++|+++|.+|+.+||+++|++||+++++|. ..+....+.||++||||++.+ +..+|+++|||+|+|
T Consensus 70 -~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~~~~~--~~~~g~~~HtD~g~l 144 (262)
T PLN03001 70 -FPPDYREVVGEYGDCMKALAQKLLAFISESLGLPCSCIE--DAVGDFYQNITVSYYPPCPQP--ELTLGLQSHSDFGAI 144 (262)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCcchhheeecCCCCCCc--ccccCCcCCcCCCee
Confidence 468999999999999999999999999999999999998 666666788999999998753 478899999999999
Q ss_pred eEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeEEEEeCchhhh
Q 024761 215 TLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLVLCHFHFPALL 258 (263)
Q Consensus 215 TlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~lvVNvGd~l~~ 258 (263)
|||+||+++||||+. +| +|++|+|+||++||||||+|+.
T Consensus 145 TlL~qd~v~GLqV~~-~g----~Wi~V~p~p~a~vVNiGD~l~~ 183 (262)
T PLN03001 145 TLLIQDDVEGLQLLK-DA----EWLMVPPISDAILIIIADQTEI 183 (262)
T ss_pred EEEEeCCCCceEEee-CC----eEEECCCCCCcEEEEccHHHHH
Confidence 999999999999985 34 4999999999999999999974
No 27
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.96 E-value=3.1e-29 Score=189.78 Aligned_cols=113 Identities=46% Similarity=0.888 Sum_probs=93.1
Q ss_pred ccEeeCCC--cchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCCCCcCcccCccccc
Q 024761 17 LHCIDLSS--PDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDELL 94 (263)
Q Consensus 17 iPvIDls~--~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~e~~ 94 (263)
||||||+. .++.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++.+.+.++||.+.+.+..
T Consensus 1 iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~~~~~ 80 (116)
T PF14226_consen 1 IPVIDLSPDPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYARSPSYRGYSPPGSEST 80 (116)
T ss_dssp --EEEHGGCHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHBCCTTCSEEEESEEECC
T ss_pred CCeEECCCCCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhcCCCCCcccccCCcccc
Confidence 79999993 3356789999999999999999999999999999999999999999999999977778999999988875
Q ss_pred CCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCC
Q 024761 95 DPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPA 133 (263)
Q Consensus 95 ~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~ 133 (263)
.. +..|++|+|+++.+.+.++|. ...++++|.||+
T Consensus 81 ~~---~~~d~~E~~~~~~~~~~~~p~-~~~~~~~n~WP~ 115 (116)
T PF14226_consen 81 DG---GKPDWKESFNIGPDLPEDDPA-YPPLYGPNIWPD 115 (116)
T ss_dssp TT---CCCCSEEEEEEECC-STTCHH-TGCTS-GGGS-T
T ss_pred CC---CCCCceEEeEEECCCCccccc-cccccCCCCCCC
Confidence 43 368999999999876555443 345678999996
No 28
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.80 E-value=1.6e-19 Score=136.59 Aligned_cols=74 Identities=24% Similarity=0.509 Sum_probs=64.2
Q ss_pred CCcccEeeCCCc-----chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC-CCcCcc
Q 024761 14 HTVLHCIDLSSP-----DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE-KHRGYT 87 (263)
Q Consensus 14 ~~~iPvIDls~~-----~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~ 87 (263)
..+||||||+.. ++.+.+++|++||++||||||+||||+.++++++++.+++||+||.|+|+++...+ ...||.
T Consensus 35 ~~~iPvIDls~~~~~~~~~~~~~~~L~~A~~~~GFf~l~nhGi~~elid~~~~~~~~FF~LP~e~K~k~~~~~~~~~gy~ 114 (120)
T PLN03176 35 SNEIPVISIAGIDDGGEKRAEICNKIVEACEEWGVFQIVDHGVDAKLVSEMTTLAKEFFALPPEEKLRFDMSGGKKGGFI 114 (120)
T ss_pred CCCCCeEECccccCCchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHhcccCCCccCCcc
Confidence 347999999843 23457899999999999999999999999999999999999999999999986654 366884
No 29
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.53 E-value=1.1e-14 Score=106.66 Aligned_cols=64 Identities=39% Similarity=0.553 Sum_probs=51.7
Q ss_pred cceeeccCCCCCCCCCCCcceecccccc--CceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeEEEEeCchhh
Q 024761 184 ATLRLLHYEGQTSDPSKGIYGAGAHSDF--GLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLVLCHFHFPAL 257 (263)
Q Consensus 184 ~~lrl~~Yp~~~~~~~~~~~g~~~HtD~--g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~lvVNvGd~l~ 257 (263)
+.+|+++||+ ++...++++|+|. +++|+|+|++++||||...+ +|+.|++.++.++||+||+|+
T Consensus 2 ~~~~~~~Y~~-----~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~-----~~~~v~~~~~~~~v~~G~~l~ 67 (98)
T PF03171_consen 2 SQLRLNRYPP-----PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDG-----EWVDVPPPPGGFIVNFGDALE 67 (98)
T ss_dssp -EEEEEEE-S-----CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETT-----EEEE----TTCEEEEEBHHHH
T ss_pred CEEEEEECCC-----cccCCceeCCCcCCCCeEEEEecccchheeccccc-----cccCccCccceeeeeceeeee
Confidence 5699999998 2467799999999 99999999999999999876 499999999999999999886
No 30
>PRK08130 putative aldolase; Validated
Probab=86.20 E-value=1 Score=37.36 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=38.0
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhh
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~ 64 (263)
..||+|++..++..+.++.+.+++++...+.+.|||+= .+.+++++..+.
T Consensus 126 g~i~v~~y~~~g~~~la~~~~~~l~~~~~vll~nHGvi~~G~s~~~A~~~~e 177 (213)
T PRK08130 126 GHVPLIPYYRPGDPAIAEALAGLAARYRAVLLANHGPVVWGSSLEAAVNATE 177 (213)
T ss_pred CccceECCCCCChHHHHHHHHHHhccCCEEEEcCCCCeeeCCCHHHHHHHHH
Confidence 36899999887777889999999999999999999952 233444444433
No 31
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=85.72 E-value=0.67 Score=33.17 Aligned_cols=59 Identities=24% Similarity=0.202 Sum_probs=35.0
Q ss_pred eeeccCCCCCCCCCCCcceecccccc-----CceeEEEe--CC-----CCceeEeeCCCCCCCCeEEcC-----CCCCeE
Q 024761 186 LRLLHYEGQTSDPSKGIYGAGAHSDF-----GLITLLAT--DE-----VLGLQICKDKDAKPQIWEYVP-----PLKGLV 248 (263)
Q Consensus 186 lrl~~Yp~~~~~~~~~~~g~~~HtD~-----g~lTlL~q--d~-----~~GLqv~~~~g~~~~~W~~V~-----p~~g~l 248 (263)
+++++|++- -.+.+|+|. ..+|+|+. +. .|.|++.... ...+....++ |.+|.+
T Consensus 1 ~~~~~y~~G--------~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~-~~~~~~~~~~~~~~~p~~g~~ 71 (100)
T PF13640_consen 1 MQLNRYPPG--------GFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSK-DSDDVSREVEDFDIVPKPGRL 71 (100)
T ss_dssp -EEEEEETT--------EEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS--TSSTCEEEGGGSEE-BTTEE
T ss_pred CEEEEECcC--------CEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccc-cCCCcceEEEeccccCCCCEE
Confidence 467777651 257899998 57888853 22 2568887532 0011355666 999999
Q ss_pred EEEeC
Q 024761 249 LCHFH 253 (263)
Q Consensus 249 vVNvG 253 (263)
|+=-+
T Consensus 72 v~F~~ 76 (100)
T PF13640_consen 72 VIFPS 76 (100)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 88766
No 32
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=84.82 E-value=5.8 Score=31.60 Aligned_cols=80 Identities=25% Similarity=0.164 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhCCCCcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccC--------ceeEEEe--C--C
Q 024761 154 VAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFG--------LITLLAT--D--E 221 (263)
Q Consensus 154 l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g--------~lTlL~q--d--~ 221 (263)
+...|.+.++..++++.. .......+++.+|.+- . ...+|.|.. .+|+++. + .
T Consensus 60 ~~~~l~~~i~~~~~~~~~-------~~~~~~~~~~~~Y~~g------~--~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~ 124 (178)
T smart00702 60 VIERIRQRLADFLGLLRG-------LPLSAEDAQVARYGPG------G--HYGPHVDNFEDDENGDRIATFLLYLNDVEE 124 (178)
T ss_pred HHHHHHHHHHHHHCCCch-------hhccCcceEEEEECCC------C--cccCcCCCCCCCCCCCeEEEEEEEeccCCc
Confidence 444455555666665421 1112345788999872 1 356899966 5888864 2 2
Q ss_pred CCceeEeeCCCCCCCCeEEcCCCCCeEEEE
Q 024761 222 VLGLQICKDKDAKPQIWEYVPPLKGLVLCH 251 (263)
Q Consensus 222 ~~GLqv~~~~g~~~~~W~~V~p~~g~lvVN 251 (263)
.|.|.+...+. ..-..|.|..|.+||-
T Consensus 125 GG~~~f~~~~~---~~~~~v~P~~G~~v~f 151 (178)
T smart00702 125 GGELVFPGLGL---MVCATVKPKKGDLLFF 151 (178)
T ss_pred CceEEecCCCC---ccceEEeCCCCcEEEE
Confidence 34477765432 1356899999987774
No 33
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=84.78 E-value=1.3 Score=35.87 Aligned_cols=48 Identities=13% Similarity=0.178 Sum_probs=36.6
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHh
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQS 63 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~ 63 (263)
.||++++..++..+.++++.+++.+...+.|.|||+= .+.+++++..+
T Consensus 120 ~v~v~~~~~~g~~~la~~~~~~l~~~~~vll~nHGv~~~G~~~~eA~~~~ 169 (184)
T PRK08333 120 KIPILPFRPAGSVELAEQVAEAMKEYDAVIMERHGIVTVGRSLREAFYKA 169 (184)
T ss_pred CEeeecCCCCCcHHHHHHHHHHhccCCEEEEcCCCCEEEcCCHHHHHHHH
Confidence 6999999877777888999999999899999999953 22344444433
No 34
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=80.07 E-value=2.9 Score=34.94 Aligned_cols=36 Identities=14% Similarity=0.190 Sum_probs=32.0
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGI 51 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi 51 (263)
.+|++++..+...+.++.+.+++.+...+.|.|||+
T Consensus 127 ~v~~~~y~~~gs~ela~~v~~~l~~~~~vlL~nHGv 162 (217)
T PRK05874 127 DVRCTEYAASGTPEVGRNAVRALEGRAAALIANHGL 162 (217)
T ss_pred ceeeecCCCCCcHHHHHHHHHHhCcCCEEEEcCCCC
Confidence 589999987777788999999999999999999995
No 35
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=79.99 E-value=8.4 Score=32.41 Aligned_cols=26 Identities=15% Similarity=-0.143 Sum_probs=18.1
Q ss_pred CCceeEeeCCCCCCCCeEEcCCCCCeEEEEe
Q 024761 222 VLGLQICKDKDAKPQIWEYVPPLKGLVLCHF 252 (263)
Q Consensus 222 ~~GLqv~~~~g~~~~~W~~V~p~~g~lvVNv 252 (263)
.|.|.+....|. ..|+|..|.+||=-
T Consensus 129 GGEl~~~~~~g~-----~~Vkp~aG~~vlfp 154 (226)
T PRK05467 129 GGELVIEDTYGE-----HRVKLPAGDLVLYP 154 (226)
T ss_pred CCceEEecCCCc-----EEEecCCCeEEEEC
Confidence 456888765542 67888888887743
No 36
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=78.54 E-value=4.5 Score=33.42 Aligned_cols=73 Identities=21% Similarity=0.180 Sum_probs=45.9
Q ss_pred CccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeEEEEeCchhhhhhh
Q 024761 182 PIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLVLCHFHFPALLCLL 261 (263)
Q Consensus 182 ~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~lvVNvGd~l~~~~~ 261 (263)
....+|.+||.|.... ++-.+.+.. .=.++.|+..|-..+..-+ .+.=+.|||-=|+.++|+||--+.-++
T Consensus 88 t~G~~~~~H~Hp~ade-~E~y~vi~G-----~g~m~v~~~~G~~~v~~~~---~Gd~iyVPp~~gH~t~N~Gd~pLvf~~ 158 (209)
T COG2140 88 TPGAMRELHYHPNADE-PEIYYVLKG-----EGRMLVQKPEGEARVIAVR---AGDVIYVPPGYGHYTINTGDEPLVFLN 158 (209)
T ss_pred cCCcccccccCCCCCc-ccEEEEEec-----cEEEEEEcCCCcEEEEEec---CCcEEEeCCCcceEeecCCCCCEEEEE
Confidence 3456888899885432 123344432 2334555544444444321 134799999999999999998887776
Q ss_pred cC
Q 024761 262 VY 263 (263)
Q Consensus 262 ~~ 263 (263)
+|
T Consensus 159 v~ 160 (209)
T COG2140 159 VY 160 (209)
T ss_pred EE
Confidence 65
No 37
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=77.13 E-value=4.3 Score=32.71 Aligned_cols=47 Identities=11% Similarity=0.076 Sum_probs=34.4
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHh
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQS 63 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~ 63 (263)
.||++ +..++..+.++.+.+++.+.-.+.|.|||+= .+.+++++..+
T Consensus 115 ~ipv~-~~~~~~~~la~~v~~~l~~~~~vll~nHG~~~~G~~i~~A~~~~ 163 (181)
T PRK08660 115 TIPVV-GGDIGSGELAENVARALSEHKGVVVRGHGTFAIGKTLEEAYIYT 163 (181)
T ss_pred CEeEE-eCCCCCHHHHHHHHHHHhhCCEEEEcCCCceEeCCCHHHHHHHH
Confidence 58998 5566667778899999999999999999952 22344444433
No 38
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=76.05 E-value=1.9 Score=39.52 Aligned_cols=55 Identities=9% Similarity=0.058 Sum_probs=37.7
Q ss_pred CCCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcC
Q 024761 13 AHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFN 68 (263)
Q Consensus 13 ~~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 68 (263)
...-||.|||++.......++..+..++.|++.|.|+ ||.+......+..++|.+
T Consensus 46 G~~~IP~i~f~di~~~~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~ 100 (416)
T PF07350_consen 46 GSSIIPEIDFADIENGGVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLK 100 (416)
T ss_dssp T--SS-EEEHHHHHCT---HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeHHHHhCCCCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 4567999999976555456778888899999999875 788877777777666643
No 39
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=75.85 E-value=1.8 Score=34.79 Aligned_cols=37 Identities=16% Similarity=0.230 Sum_probs=31.3
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHH-hcceEEEEcCCC
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACL-DCGFFYVINHGI 51 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~-~~GFf~l~nhgi 51 (263)
..+|+|++..+...+.++.|.++++ +...+.+.|||+
T Consensus 122 ~~v~~~~~~~~~~~~l~~~i~~~l~~~~~~vll~nHG~ 159 (184)
T PF00596_consen 122 GEVPVVPYAPPGSEELAEAIAEALGEDRKAVLLRNHGV 159 (184)
T ss_dssp SCEEEE-THSTTCHHHHHHHHHHHTCTSSEEEETTTEE
T ss_pred ccceeeccccccchhhhhhhhhhhcCCceEEeecCCce
Confidence 5799999988776677889999999 889999999994
No 40
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=75.63 E-value=3.7 Score=34.12 Aligned_cols=49 Identities=14% Similarity=0.223 Sum_probs=36.5
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhh
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~ 64 (263)
.||++.+..++..+.++.+.+++.+...+.+.|||+= .+.+++++..+.
T Consensus 124 ~i~~~~y~~~gs~~la~~v~~~l~~~~~vll~nHGv~~~G~~~~eA~~~~e 174 (214)
T PRK06833 124 NVRCAEYATFGTKELAENAFEAMEDRRAVLLANHGLLAGANNLKNAFNIAE 174 (214)
T ss_pred CeeeccCCCCChHHHHHHHHHHhCcCCEEEECCCCCEEEeCCHHHHHHHHH
Confidence 5888888777777778889999999999999999953 233445454443
No 41
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=74.51 E-value=4.3 Score=33.78 Aligned_cols=49 Identities=8% Similarity=0.113 Sum_probs=36.4
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhh
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~ 64 (263)
.||++.+..++..+.++++.+++.+.-.+.+.|||+= .+.+++++..+.
T Consensus 122 ~v~~~~y~~~gs~~la~~~~~~l~~~~~vLl~nHGv~~~G~~~~~A~~~~e 172 (215)
T PRK08087 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAH 172 (215)
T ss_pred CceeecCCCCCCHHHHHHHHHHhCcCCEEEecCCCCEEEcCCHHHHHHHHH
Confidence 4899998877777788899999998899999999953 233444444433
No 42
>PRK06755 hypothetical protein; Validated
Probab=72.78 E-value=4.2 Score=33.78 Aligned_cols=49 Identities=10% Similarity=-0.029 Sum_probs=34.6
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhh
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~ 64 (263)
+||+|.+..+...+.++.+.++.++...+.|.|||+= -..+++++..+.
T Consensus 136 ~IPiv~~~~~~~~~la~~~~~~~~~~~avLl~~HGv~~~G~~l~eA~~~~E 186 (209)
T PRK06755 136 TIPIVEDEKKFADLLENNVPNFIEGGGVVLVHNYGMIVWGKTPEEAKKWLE 186 (209)
T ss_pred EEEEEeCCCchhHHHHHHHHhhccCCCEEEEcCCCeEEEcCCHHHHHHHHH
Confidence 6999998766556667777788888889999999953 123444444433
No 43
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=71.89 E-value=5 Score=34.76 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=37.0
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhh
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~ 64 (263)
.||++.+..+...+.++.+.+++.+...+.+.|||+= .+.+++++..+.
T Consensus 179 ~i~vvpy~~pgs~eLa~~v~~~l~~~~avLL~nHGvv~~G~~l~eA~~~~e 229 (274)
T PRK03634 179 GVGIVPWMVPGTDEIGQATAEKMQKHDLVLWPKHGVFGSGPTLDEAFGLID 229 (274)
T ss_pred ceeEecCCCCCCHHHHHHHHHHhccCCEEEEcCCCCeEecCCHHHHHHHHH
Confidence 5889999877777888899999999999999999953 233444454443
No 44
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=68.38 E-value=5.9 Score=34.25 Aligned_cols=49 Identities=16% Similarity=0.135 Sum_probs=37.2
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhh
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~ 64 (263)
.||++.+..+...+.++.+.+++++..-+.|.|||+= ...+++++..+.
T Consensus 177 ~i~vvp~~~pGs~eLA~~v~~~l~~~~avLL~nHGvva~G~~l~eA~~~~E 227 (270)
T TIGR02624 177 GVGIIPWMVPGTNEIGEATAEKMKEHRLVLWPHHGIFGAGPSLDETFGLIE 227 (270)
T ss_pred ccccccCcCCCCHHHHHHHHHHhccCCEEEEcCCCCeEecCCHHHHHHHHH
Confidence 4889988888888889999999999999999999952 223444444433
No 45
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=68.06 E-value=7.5 Score=31.69 Aligned_cols=47 Identities=13% Similarity=0.085 Sum_probs=33.1
Q ss_pred cccEeeCCCcchHHHHHHHHHHHH---hcceEEEEcCCCC--HHHHHHHHHHh
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACL---DCGFFYVINHGIS--QEFMDEVFTQS 63 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~---~~GFf~l~nhgi~--~~~~~~~~~~~ 63 (263)
.||+++. .+...+.++.+.++++ +...+.|.|||+= .+.+++++..+
T Consensus 126 ~vp~~~~-~~gs~ela~~~~~~l~~~~~~~avll~nHGv~~~G~~~~~A~~~~ 177 (193)
T TIGR03328 126 TIPIFEN-TQDIARLADSVAPYLEAYPDVPGVLIRGHGLYAWGRDWEEAKRHL 177 (193)
T ss_pred EEeeecC-CCChHHHHHHHHHHHhcCCCCCEEEEcCCcceEEcCCHHHHHHHH
Confidence 5899985 5666778889999986 4789999999953 22344444433
No 46
>PRK06357 hypothetical protein; Provisional
Probab=67.00 E-value=8.7 Score=32.02 Aligned_cols=36 Identities=11% Similarity=0.321 Sum_probs=28.4
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhc------ceEEEEcCCC
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDC------GFFYVINHGI 51 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~------GFf~l~nhgi 51 (263)
.||++.+..+...+.++.+.+++++. ..+.|.|||+
T Consensus 130 ~i~~~p~~~~gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGv 171 (216)
T PRK06357 130 KIPTLPFAPATSPELAEIVRKHLIELGDKAVPSAFLLNSHGI 171 (216)
T ss_pred CcceecccCCCcHHHHHHHHHHHhhcCcccCCCEEEECCCCC
Confidence 47888887666677788888888764 5899999995
No 47
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=66.99 E-value=6.8 Score=32.53 Aligned_cols=36 Identities=14% Similarity=0.296 Sum_probs=30.2
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGI 51 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi 51 (263)
.||+|.+..++..+.++.+.+++.+...+.|.|||+
T Consensus 121 ~i~~v~y~~~gs~~la~~v~~~~~~~~~vLL~nHG~ 156 (214)
T TIGR01086 121 NIPCVPYATFGSTKLASEVVAGILKSKAILLLHHGL 156 (214)
T ss_pred CccccCCCCCChHHHHHHHHHHhhhCCEEehhcCCC
Confidence 488888887766677888888888889999999995
No 48
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=66.25 E-value=6.7 Score=32.71 Aligned_cols=50 Identities=6% Similarity=-0.071 Sum_probs=35.9
Q ss_pred CcccEeeCCCcchHHHHHHHHHHH--HhcceEEEEcCCCC--HHHHHHHHHHhh
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQAC--LDCGFFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~--~~~GFf~l~nhgi~--~~~~~~~~~~~~ 64 (263)
..||++.+..+...+.++++.+++ .+...+.|.|||+= .+.+++++..+.
T Consensus 129 ~~ip~~~y~~~g~~ela~~i~~~l~~~~~~~vll~nHG~~~~G~~~~eA~~~~e 182 (221)
T PRK06557 129 GPIPVGPFALIGDEAIGKGIVETLKGGRSPAVLMQNHGVFTIGKDAEDAVKAAV 182 (221)
T ss_pred CCeeccCCcCCCcHHHHHHHHHHhCcCCCCEEEECCCCceEEcCCHHHHHHHHH
Confidence 468988887666667788888998 78889999999953 223455554433
No 49
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=64.32 E-value=5.8 Score=32.73 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=34.9
Q ss_pred CcccEeeCCCc--chHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHh
Q 024761 15 TVLHCIDLSSP--DIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQS 63 (263)
Q Consensus 15 ~~iPvIDls~~--~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~ 63 (263)
..||++++..+ ...+.++.+.+++.+.-.+.+.|||+= .+.+++++..+
T Consensus 121 ~~ip~~~~~~~~~~~~~la~~~~~~l~~~~~vll~nHG~~~~G~~~~~A~~~~ 173 (209)
T cd00398 121 GDIPCTPYMTPETGEDEIGTQRALGFPNSKAVLLRNHGLFAWGPTLDEAFHLA 173 (209)
T ss_pred CCeeecCCcCCCccHHHHHHHHhcCCCcCCEEEEcCCCCeEecCCHHHHHHHH
Confidence 46999999877 556667777778888889999999953 22344444433
No 50
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=56.00 E-value=17 Score=32.71 Aligned_cols=51 Identities=16% Similarity=-0.046 Sum_probs=37.3
Q ss_pred CCcccEeeCCCcc-hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhc
Q 024761 14 HTVLHCIDLSSPD-IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFF 67 (263)
Q Consensus 14 ~~~iPvIDls~~~-~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 67 (263)
.+++|.||+++.- ..+.+.++.+++.++|++.|.+-+++.+. +.+.++.|-
T Consensus 107 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~G~v~~rg~~~~~~~---~~~~~~~~G 158 (366)
T TIGR02409 107 ELSLPKFDHEAVMKDDSVLLDWLSAVRDVGIAVLKGAPTKPGA---VEKLGKRIG 158 (366)
T ss_pred cccCCceeHHHHhCCHHHHHHHHHHHHhccEEEEeCCCCCHHH---HHHHHHHhc
Confidence 3568999997542 45567889999999999999998886653 444455553
No 51
>PRK07490 hypothetical protein; Provisional
Probab=55.73 E-value=14 Score=31.40 Aligned_cols=49 Identities=14% Similarity=0.050 Sum_probs=34.4
Q ss_pred cccEe-eCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhh
Q 024761 16 VLHCI-DLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 16 ~iPvI-Dls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~ 64 (263)
.||++ ++..+...+.++.+.+++.+.-.+.|.|||+= ...+++++..+.
T Consensus 133 ~v~~~~~y~~~~~~ela~~v~~~l~~~~avlL~nHG~v~~G~~~~eA~~~~e 184 (245)
T PRK07490 133 RVAVDTLYGGMALEEEGERLAGLLGDKRRLLMGNHGVLVTGDTVAEAFDDLY 184 (245)
T ss_pred CeeeccCCCCcCcHHHHHHHHHHhCcCCEEEECCCCcEEecCCHHHHHHHHH
Confidence 47775 57665556778899999999999999999952 233444444433
No 52
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=53.18 E-value=17 Score=30.06 Aligned_cols=34 Identities=26% Similarity=0.368 Sum_probs=27.0
Q ss_pred cccEee-CCCcchHHHHHHHHHHHH-hcceEEEEcCCC
Q 024761 16 VLHCID-LSSPDIHQSVSLLKQACL-DCGFFYVINHGI 51 (263)
Q Consensus 16 ~iPvID-ls~~~~~~~~~~l~~A~~-~~GFf~l~nhgi 51 (263)
.||+++ +. ...+.++.+.++++ +...+.+.|||+
T Consensus 137 ~vpv~~~~~--~~~eLa~~v~~~l~~~~~avLl~nHG~ 172 (208)
T PRK06754 137 HIPIIENHA--DIPTLAEEFAKHIQGDSGAVLIRNHGI 172 (208)
T ss_pred EEEEecCCC--CHHHHHHHHHHHhccCCcEEEECCCce
Confidence 488886 33 34677888999987 888999999994
No 53
>PRK06661 hypothetical protein; Provisional
Probab=50.49 E-value=18 Score=30.40 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=27.9
Q ss_pred cccEeeCCCcch--HHHHHHHHHHHHhcceEEEEcCCC
Q 024761 16 VLHCIDLSSPDI--HQSVSLLKQACLDCGFFYVINHGI 51 (263)
Q Consensus 16 ~iPvIDls~~~~--~~~~~~l~~A~~~~GFf~l~nhgi 51 (263)
.||..++..... .+.++.+.+++.+...+.|.|||+
T Consensus 123 ~i~~~~~~~~~~~~~~~~~~~a~~l~~~~avll~nHG~ 160 (231)
T PRK06661 123 RISYHNYNSLALDADKQSSRLVNDLKQNYVMLLRNHGA 160 (231)
T ss_pred CceecCCCccccCchhHHHHHHHHhCCCCEEEECCCCC
Confidence 467776664432 556788999999999999999995
No 54
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=49.97 E-value=48 Score=28.33 Aligned_cols=41 Identities=20% Similarity=0.283 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhcce--EEEEc-CCCCHHHHHHHHHHhhHhcC
Q 024761 28 HQSVSLLKQACLDCGF--FYVIN-HGISQEFMDEVFTQSKRFFN 68 (263)
Q Consensus 28 ~~~~~~l~~A~~~~GF--f~l~n-hgi~~~~~~~~~~~~~~fF~ 68 (263)
......+.+++..+|| |+++| ||=....+..+.+..+..|.
T Consensus 89 ~~~~~~~~~Sl~~~Gfrk~v~vNgHGGN~~~l~~v~~el~~~~~ 132 (250)
T COG1402 89 IALLVELVESLARHGFRKFVIVNGHGGNSAALEIVARELRAELG 132 (250)
T ss_pred HHHHHHHHHHHHhcCccEEEEEecCCCcHHHHHHHHHHHHHhcc
Confidence 4557889999999999 55554 88666666666665554443
No 55
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=49.33 E-value=36 Score=29.32 Aligned_cols=52 Identities=21% Similarity=0.275 Sum_probs=38.3
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCC
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNL 69 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~l 69 (263)
++|.=+||+..-..+..++|.+|+.++|+..+.|-.++. ++..+.++.|-.+
T Consensus 14 aev~g~dl~~~l~~~~~~~l~~~l~~~Gvlvfr~q~l~~---~~~~~~~~~~G~~ 65 (277)
T PRK09553 14 AQISGIDLTRPLSDNQFEQLYHALLRHQVLFFRDQPITP---QQQRDLAARFGDL 65 (277)
T ss_pred eEEeCcccCCcCCHHHHHHHHHHHHHCCEEEECCCCCCH---HHHHHHHHHhCCC
Confidence 456667887653445578899999999999999998875 4555666666543
No 56
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=48.48 E-value=1.1e+02 Score=27.14 Aligned_cols=12 Identities=33% Similarity=0.373 Sum_probs=9.7
Q ss_pred EEcCCCCCeEEE
Q 024761 239 EYVPPLKGLVLC 250 (263)
Q Consensus 239 ~~V~p~~g~lvV 250 (263)
+.|+|..|..|+
T Consensus 206 l~VkPkkG~ALl 217 (310)
T PLN00052 206 LAVKPVKGDAVL 217 (310)
T ss_pred eEeccCcceEEE
Confidence 789999987665
No 57
>PRK05834 hypothetical protein; Provisional
Probab=46.86 E-value=32 Score=28.12 Aligned_cols=49 Identities=10% Similarity=0.042 Sum_probs=31.6
Q ss_pred cccEeeCCCcch--HHHHHHHHHHHHhcc--eEEEEcCCCC--HHHHHHHHHHhh
Q 024761 16 VLHCIDLSSPDI--HQSVSLLKQACLDCG--FFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 16 ~iPvIDls~~~~--~~~~~~l~~A~~~~G--Ff~l~nhgi~--~~~~~~~~~~~~ 64 (263)
+||++.+..+.. +..++.+.+++++.. .+.|.|||+= .+.+++++..+.
T Consensus 121 ~ipv~~~~~~~~~~~~la~~v~~~l~~~~~~avLL~nHGvv~~G~~l~eA~~~~e 175 (194)
T PRK05834 121 EISIYDPKDFDDWYERADTEILRYLQEKNKNFVVIKGYGVYAYARDIYELAKKIA 175 (194)
T ss_pred eeeecCccccchHHHhHHHHHHHHHhhcCCCEEEEcCCcceEECCCHHHHHHHHH
Confidence 488887766543 234677888888755 9999999942 233445554443
No 58
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=44.89 E-value=1.6e+02 Score=23.49 Aligned_cols=60 Identities=13% Similarity=-0.073 Sum_probs=34.8
Q ss_pred eeeccCCCCCCCCCCCcceeccccccCcee----EE-EeCCCCc-eeEeeCCCCCCCCeEEcCCCCCeEEEEeCch
Q 024761 186 LRLLHYEGQTSDPSKGIYGAGAHSDFGLIT----LL-ATDEVLG-LQICKDKDAKPQIWEYVPPLKGLVLCHFHFP 255 (263)
Q Consensus 186 lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lT----lL-~qd~~~G-Lqv~~~~g~~~~~W~~V~p~~g~lvVNvGd~ 255 (263)
.-+|+|++- -+++.|.|-.-+. |. +.=+... +.+... ...+..+.+.-.+|.++|.-|+.
T Consensus 97 ~LvN~Y~~G--------d~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~--~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 97 CLVNRYAPG--------ATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGL--KRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred EEEEeecCC--------CccccccccccccCCCCEEEEeCCCCEEEEecCC--cCCCceEEEEeCCCCEEEECCch
Confidence 457999862 2689999953321 11 1111112 222211 11235889999999999999874
No 59
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=43.01 E-value=22 Score=24.49 Aligned_cols=21 Identities=24% Similarity=0.542 Sum_probs=17.7
Q ss_pred HHHHHHHHhcceEEEEcCCCC
Q 024761 32 SLLKQACLDCGFFYVINHGIS 52 (263)
Q Consensus 32 ~~l~~A~~~~GFf~l~nhgi~ 52 (263)
+.|..-|.+.||+||..|-+.
T Consensus 36 ~~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 36 EPIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred cHHHHHHHhcceEEEEeeeec
Confidence 468899999999999887654
No 60
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=41.47 E-value=67 Score=27.68 Aligned_cols=44 Identities=20% Similarity=0.348 Sum_probs=33.3
Q ss_pred EeeCCCcchHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHHhhH
Q 024761 19 CIDLSSPDIHQSVSLLKQACLDCGFFYVIN-HGISQEFMDEVFTQSKR 65 (263)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~GFf~l~n-hgi~~~~~~~~~~~~~~ 65 (263)
+|||+.|+. ..++.+-|.+.|.--|++ .|.+++.++.+.++++.
T Consensus 73 ~IDFT~P~~---~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~ 117 (266)
T COG0289 73 LIDFTTPEA---TLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEK 117 (266)
T ss_pred EEECCCchh---hHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhh
Confidence 688887743 455667888888877777 48998888888877766
No 61
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=40.52 E-value=40 Score=25.17 Aligned_cols=44 Identities=34% Similarity=0.442 Sum_probs=30.8
Q ss_pred EeeCCCcchHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHHhhH
Q 024761 19 CIDLSSPDIHQSVSLLKQACLDCGFFYVIN-HGISQEFMDEVFTQSKR 65 (263)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~GFf~l~n-hgi~~~~~~~~~~~~~~ 65 (263)
+|||+.++ .+....+.|.+.|.=.|++ .|.+++.++.+.++++.
T Consensus 71 vIDfT~p~---~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~ 115 (124)
T PF01113_consen 71 VIDFTNPD---AVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAKK 115 (124)
T ss_dssp EEEES-HH---HHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTTT
T ss_pred EEEcCChH---HhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhcc
Confidence 67888553 3555667777789999996 58988888887776654
No 62
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=40.37 E-value=39 Score=29.48 Aligned_cols=29 Identities=17% Similarity=0.310 Sum_probs=23.5
Q ss_pred HHHHHHhcceEEEEcCCCCHHHHHHHHHHhh
Q 024761 34 LKQACLDCGFFYVINHGISQEFMDEVFTQSK 64 (263)
Q Consensus 34 l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~ 64 (263)
..+++++.|||.|.| +|..++..+.+...
T Consensus 17 Al~~lED~Gy~cvDN--lP~~Ll~~l~~~~~ 45 (284)
T PF03668_consen 17 ALRALEDLGYYCVDN--LPPSLLPQLIELLA 45 (284)
T ss_pred HHHHHHhcCeeEEcC--CcHHHHHHHHHHHH
Confidence 348899999999999 67788887777655
No 63
>PF06820 Phage_fiber_C: Putative prophage tail fibre C-terminus; InterPro: IPR009640 This entry represents the C terminus of phage 933W tail fibre protein. This domain is found together with conserved RLGP motif. The characteristics of the protein distribution suggest prophage matches.
Probab=39.11 E-value=23 Score=22.81 Aligned_cols=35 Identities=20% Similarity=0.202 Sum_probs=22.8
Q ss_pred eecccccc---CceeEE-------EeCCCCceeEeeCCCCCCCCeEEcC
Q 024761 204 GAGAHSDF---GLITLL-------ATDEVLGLQICKDKDAKPQIWEYVP 242 (263)
Q Consensus 204 g~~~HtD~---g~lTlL-------~qd~~~GLqv~~~~g~~~~~W~~V~ 242 (263)
|.-+-||- .-||+| +|--..-|||+..+|. |.+|.
T Consensus 17 G~~P~tdg~liT~ltfL~pkd~~~vq~~f~~LQv~fgDGp----Wqdik 61 (64)
T PF06820_consen 17 GWFPETDGRLITGLTFLDPKDATRVQGVFRHLQVRFGDGP----WQDIK 61 (64)
T ss_pred ccccCCCcceEeeeEEecccCchhheeeeeeeEEEeccCC----hhhcc
Confidence 45566663 345666 2322467999998885 99886
No 64
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=38.79 E-value=43 Score=27.48 Aligned_cols=48 Identities=17% Similarity=0.110 Sum_probs=31.0
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcc---eEEEEcCCCC--HHHHHHHHHHhh
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCG---FFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~G---Ff~l~nhgi~--~~~~~~~~~~~~ 64 (263)
.||++.- .++..+.++.+.+++++.. .+.|.|||+= .+.+++++..+.
T Consensus 134 ~vp~~~~-~~~~~eLa~~v~~~l~~~~~~~avlL~nHGvi~~G~~~~eA~~~~e 186 (204)
T PRK09220 134 VVPIFDN-DQDIARLAARVAPYLDAQPLRYGYLIRGHGLYCWGRDMAEARRHLE 186 (204)
T ss_pred EEeeecC-CCCHHHHHHHHHHHHHhCCCCcEEEECCCceEEEcCCHHHHHHHHH
Confidence 5666553 2234677888999998864 8999999952 223445554443
No 65
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=36.66 E-value=60 Score=25.91 Aligned_cols=48 Identities=19% Similarity=-0.043 Sum_probs=35.0
Q ss_pred eecccccc----CceeEEEeC----CCCceeEeeC-----CCCCCCCeEEcCCCCCeEEEEeCchhh
Q 024761 204 GAGAHSDF----GLITLLATD----EVLGLQICKD-----KDAKPQIWEYVPPLKGLVLCHFHFPAL 257 (263)
Q Consensus 204 g~~~HtD~----g~lTlL~qd----~~~GLqv~~~-----~g~~~~~W~~V~p~~g~lvVNvGd~l~ 257 (263)
....|+|. ...|++..- ..+|+-+... .| +.|.+.+|++|+-.|..++
T Consensus 86 ~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g------~~~~~~~GtVl~~~~~~~~ 146 (171)
T PF12851_consen 86 CTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILG------VAFAYQPGTVLIFCAKREL 146 (171)
T ss_pred CccceecCCCCCCCeEEEEecCCccccCceEeccccccccCC------EEEecCCCcEEEEccccee
Confidence 35678888 777888752 2467666655 44 8899999999998887554
No 66
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=34.76 E-value=57 Score=27.35 Aligned_cols=36 Identities=11% Similarity=0.055 Sum_probs=25.5
Q ss_pred cccEeeCCCc------chHHHHHHHHHHHHhc-------ceEEEEcCCC
Q 024761 16 VLHCIDLSSP------DIHQSVSLLKQACLDC-------GFFYVINHGI 51 (263)
Q Consensus 16 ~iPvIDls~~------~~~~~~~~l~~A~~~~-------GFf~l~nhgi 51 (263)
.||++++..+ ...+.++.+.+++++. ..+.+.|||+
T Consensus 124 ~ip~~~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~ 172 (231)
T PRK08193 124 DIPCTRKMTDEEINGEYEWETGKVIVETFEKRGIDPAAVPGVLVHSHGP 172 (231)
T ss_pred CcceecCCCcccccccchhhHHHHHHHHHhhccCCcccCCEEEEcCCCc
Confidence 5898886532 1235677888888754 4799999995
No 67
>PRK07044 aldolase II superfamily protein; Provisional
Probab=32.97 E-value=56 Score=27.85 Aligned_cols=50 Identities=18% Similarity=0.040 Sum_probs=32.6
Q ss_pred cccEeeCCCcc-hHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhhH
Q 024761 16 VLHCIDLSSPD-IHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSKR 65 (263)
Q Consensus 16 ~iPvIDls~~~-~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~~ 65 (263)
.||++++..+. ..+.++.+.+++.+...+.|.|||+= .+.+++++..+..
T Consensus 138 ~i~~~~y~~~~~~~e~~~~va~~l~~~~avLL~nHGvi~~G~~l~eA~~~~e~ 190 (252)
T PRK07044 138 RLAYHDYEGIALDLDEGERLVADLGDKPAMLLRNHGLLTVGRTVAEAFLLMYT 190 (252)
T ss_pred CceeeCCCCCcCCHHHHHHHHHHhccCCEEEECCCCceEecCCHHHHHHHHHH
Confidence 47888776432 34456788888888999999999952 2334444444433
No 68
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=32.52 E-value=35 Score=20.10 Aligned_cols=20 Identities=30% Similarity=0.421 Sum_probs=14.1
Q ss_pred cccCceeEEEeCCCCceeEee
Q 024761 209 SDFGLITLLATDEVLGLQICK 229 (263)
Q Consensus 209 tD~g~lTlL~qd~~~GLqv~~ 229 (263)
-.||++||..||+. =.||..
T Consensus 13 i~yGsV~iiiqdG~-vvQIe~ 32 (38)
T PF10055_consen 13 IRYGSVTIIIQDGR-VVQIEK 32 (38)
T ss_pred CCcceEEEEEECCE-EEEEEh
Confidence 46899999999862 245543
No 69
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=30.88 E-value=3.1e+02 Score=22.79 Aligned_cols=60 Identities=13% Similarity=0.009 Sum_probs=34.0
Q ss_pred eeeccCCCCCCCCCCCcceeccccccC-----ceeEEEeCCCCc-eeEeeCCCCCCCCeEEcCCCCCeEEEEeCch
Q 024761 186 LRLLHYEGQTSDPSKGIYGAGAHSDFG-----LITLLATDEVLG-LQICKDKDAKPQIWEYVPPLKGLVLCHFHFP 255 (263)
Q Consensus 186 lrl~~Yp~~~~~~~~~~~g~~~HtD~g-----~lTlL~qd~~~G-Lqv~~~~g~~~~~W~~V~p~~g~lvVNvGd~ 255 (263)
.-+|+|.+ +. +++.|.|-. ..-+-+.=+... +.+.... ..+.+..+.-..|.++|.-|++
T Consensus 118 ~LvN~Y~~-------G~-~mg~H~D~~E~~~~~pI~SvSLG~~~~F~~~~~~--~~~~~~~l~L~~Gdllvm~G~s 183 (213)
T PRK15401 118 CLINRYAP-------GA-KLSLHQDKDERDFRAPIVSVSLGLPAVFQFGGLK--RSDPLQRILLEHGDVVVWGGPS 183 (213)
T ss_pred EEEEeccC-------cC-ccccccCCCcccCCCCEEEEeCCCCeEEEecccC--CCCceEEEEeCCCCEEEECchH
Confidence 44788886 22 788999942 111111111122 2222111 1235899999999999998875
No 70
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=30.31 E-value=61 Score=20.16 Aligned_cols=41 Identities=22% Similarity=0.194 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCC
Q 024761 30 SVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLP 70 (263)
Q Consensus 30 ~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp 70 (263)
.++.|...+...||....-.|+-......+...-+.++.|+
T Consensus 4 ~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~ 44 (57)
T PF01471_consen 4 DVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLP 44 (57)
T ss_dssp HHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcC
Confidence 46788899999999855555666666777777777777766
No 71
>PRK06486 hypothetical protein; Provisional
Probab=29.98 E-value=61 Score=27.83 Aligned_cols=48 Identities=13% Similarity=0.118 Sum_probs=31.1
Q ss_pred cccEee-CCC-cchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHh
Q 024761 16 VLHCID-LSS-PDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQS 63 (263)
Q Consensus 16 ~iPvID-ls~-~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~ 63 (263)
.+|++. +.. ....+.++.+.+++.+...+.|.|||+= -+.+++++..+
T Consensus 148 ~i~~~~~~~~~~~s~ela~~va~al~~~~avLL~nHG~v~~G~~l~eA~~~~ 199 (262)
T PRK06486 148 RTAVDEDYNGLALDAAEGDRIARAMGDADIVFLKNHGVMVCGPRIAEAWDDL 199 (262)
T ss_pred CeeeccCCCCccCchhHHHHHHHHhCcCCEEEECCCCCeEecCCHHHHHHHH
Confidence 466664 422 2235668889999999999999999953 23344444433
No 72
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=29.04 E-value=83 Score=20.48 Aligned_cols=38 Identities=16% Similarity=0.313 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhcc--eEEEEc------CCCCHHHHHHHHHHhhH
Q 024761 28 HQSVSLLKQACLDCG--FFYVIN------HGISQEFMDEVFTQSKR 65 (263)
Q Consensus 28 ~~~~~~l~~A~~~~G--Ff~l~n------hgi~~~~~~~~~~~~~~ 65 (263)
.+..+.|.+.++++| .+.+.. |||+.+.+..+++..++
T Consensus 23 ~~~l~~la~ia~~yg~~~irlT~~Q~l~l~~v~~~~~~~i~~~L~~ 68 (69)
T PF03460_consen 23 AEQLRALAEIAEKYGDGEIRLTTRQNLQLRGVPEENLPAIFEELKE 68 (69)
T ss_dssp HHHHHHHHHHHHHHSTSEEEEETTSCEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEECCCCeEEEeCCCHHHHHHHHHHHHc
Confidence 345677888888776 777664 57888888888776543
No 73
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=29.00 E-value=26 Score=19.08 Aligned_cols=17 Identities=41% Similarity=0.602 Sum_probs=12.1
Q ss_pred EEEEcCCCCHHHHHHHH
Q 024761 44 FYVINHGISQEFMDEVF 60 (263)
Q Consensus 44 f~l~nhgi~~~~~~~~~ 60 (263)
.||..||++.+.+.+-+
T Consensus 9 rYV~eh~ls~ee~~~RL 25 (28)
T PF12368_consen 9 RYVKEHGLSEEEVAERL 25 (28)
T ss_pred hhHHhcCCCHHHHHHHH
Confidence 47888999987665543
No 74
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=28.00 E-value=1.6e+02 Score=24.77 Aligned_cols=39 Identities=21% Similarity=0.413 Sum_probs=29.9
Q ss_pred chHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHhhH
Q 024761 26 DIHQSVSLLKQACLDCGFFYVINH-GISQEFMDEVFTQSKR 65 (263)
Q Consensus 26 ~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~ 65 (263)
...++.+.+.+||.+.|| +|.-. ||+.+-++.+++.+.+
T Consensus 161 ~~leE~~avA~aca~~g~-~lEPTGGIdl~Nf~~I~~i~ld 200 (236)
T TIGR03581 161 KHLEEYAAVAKACAKHGF-YLEPTGGIDLDNFEEIVQIALD 200 (236)
T ss_pred ccHHHHHHHHHHHHHcCC-ccCCCCCccHHhHHHHHHHHHH
Confidence 456778999999999998 56544 6998877777776543
No 75
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=27.68 E-value=85 Score=28.25 Aligned_cols=50 Identities=14% Similarity=0.180 Sum_probs=35.0
Q ss_pred cccEeeCCCc-c-hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcC
Q 024761 16 VLHCIDLSSP-D-IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFN 68 (263)
Q Consensus 16 ~iPvIDls~~-~-~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 68 (263)
.+|.+|+.+. . ..+...++.+++.++|+..|.|-+++.+. +.+.+++|-.
T Consensus 100 ~~~~~~~~~~~~~~d~~l~~~l~~l~~~G~v~~~g~~~~~~~---~~~~a~riG~ 151 (362)
T TIGR02410 100 KDPSVHFKTTYDHTDSTLKSFSKNIYKYGFTFVDNVPVTPEA---TEKLCERISI 151 (362)
T ss_pred cCCceeHHHHhccCHHHHHHHHHHHHhhCEEEEcCCCCCHHH---HHHHHHHhcc
Confidence 4577777632 1 13567889999999999999999887654 3444555543
No 76
>TIGR02130 dapB_plant dihydrodipicolinate reductase. This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.
Probab=27.19 E-value=1.3e+02 Score=26.23 Aligned_cols=39 Identities=23% Similarity=0.353 Sum_probs=27.1
Q ss_pred cEeeCCCcchHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHH
Q 024761 18 HCIDLSSPDIHQSVSLLKQACLDCGFFYVINH-GISQEFMDEV 59 (263)
Q Consensus 18 PvIDls~~~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~ 59 (263)
-+|||+.|+. +.+..+.|...|.-.|++. |.+.+.++++
T Consensus 72 VvIDFT~P~~---~~~n~~~~~~~gv~~ViGTTG~~~~~~~~l 111 (275)
T TIGR02130 72 ICIDYTHPSA---VNDNAAFYGKHGIPFVMGTTGGDREALAKL 111 (275)
T ss_pred EEEECCChHH---HHHHHHHHHHCCCCEEEcCCCCCHHHHHHH
Confidence 3599997753 4455678888888888774 7777655555
No 77
>COG1741 Pirin-related protein [General function prediction only]
Probab=26.32 E-value=1.2e+02 Score=26.47 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=28.4
Q ss_pred CCccceeeccCCCCCCCCCCCcceeccccccCceeEEEe------CCCCceeEeeCC
Q 024761 181 EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLAT------DEVLGLQICKDK 231 (263)
Q Consensus 181 ~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~q------d~~~GLqv~~~~ 231 (263)
.+...|+.+. |.. - .+...++-.+|.++.+||.+++ |..|.-++..++
T Consensus 38 ~pF~~ld~~~-~~~-~-~pG~~f~pHPHrg~etvTyvl~G~i~HrDS~Gn~~~i~pG 91 (276)
T COG1741 38 GPFLFLDVIG-PDV-L-APGRGFPPHPHRGLETVTYVLDGEIEHRDSLGNKGVIRPG 91 (276)
T ss_pred CCccceeecc-ccc-c-cCCCcCCCCCCCCcEEEEEEEccEEEEeecCCceeeeccc
Confidence 3555566555 211 1 1122466789999999999985 555555555443
No 78
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=26.26 E-value=83 Score=25.06 Aligned_cols=61 Identities=20% Similarity=0.086 Sum_probs=33.0
Q ss_pred ceeeccCCCCCCCCCCCcceeccccccCce---eEEEe--CCC-CceeEeeCCCCCCCCeEEcCCCCCeEEEEeCch
Q 024761 185 TLRLLHYEGQTSDPSKGIYGAGAHSDFGLI---TLLAT--DEV-LGLQICKDKDAKPQIWEYVPPLKGLVLCHFHFP 255 (263)
Q Consensus 185 ~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~l---TlL~q--d~~-~GLqv~~~~g~~~~~W~~V~p~~g~lvVNvGd~ 255 (263)
..-+|+|.+ +. ++++|.|--.+ ..+.. =+. .=+.+.... ..+..+.|.-.+|+++|.-|+.
T Consensus 98 ~~liN~Y~~-------g~-~i~~H~D~~~~~~~~~I~slSLG~~~~~~f~~~~--~~~~~~~~~L~~gsl~vm~g~~ 164 (194)
T PF13532_consen 98 QCLINYYRD-------GS-GIGPHSDDEEYGFGPPIASLSLGSSRVFRFRNKS--DDDEPIEVPLPPGSLLVMSGEA 164 (194)
T ss_dssp EEEEEEESS-------TT--EEEE---TTC-CCSEEEEEEEES-EEEEEEECG--GTS-EEEEEE-TTEEEEEETTH
T ss_pred EEEEEecCC-------CC-CcCCCCCcccccCCCcEEEEEEccCceEEEeecc--CCCccEEEEcCCCCEEEeChHH
Confidence 456789987 33 78999997633 22211 011 124444321 1236899999999999999876
No 79
>TIGR01573 cas2 CRISPR-associated endoribonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. It is an endoribonuclease, capable of cleaving single-stranded RNA. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead.
Probab=25.88 E-value=71 Score=22.70 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=32.0
Q ss_pred EeeCCCcchHHHHHHHHHHHHhcceEEEEcC----CCCHHHHH-HHHHHhhHhc
Q 024761 19 CIDLSSPDIHQSVSLLKQACLDCGFFYVINH----GISQEFMD-EVFTQSKRFF 67 (263)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~GFf~l~nh----gi~~~~~~-~~~~~~~~fF 67 (263)
+-|+++.+.+....++.+.|+.+||+.+-.. -++..... .+.+..++.-
T Consensus 6 ~YDI~~~~~~k~r~kv~k~L~~~G~~rvQ~SVf~~~~~~~~~~~~l~~~l~~~i 59 (95)
T TIGR01573 6 VYDIPTDGERKRRRKLRKLLEKYGLQRVQYSVFEGILEPNQLARKLIERLKRII 59 (95)
T ss_pred EEECCCCchHHHHHHHHHHHHHcchhheeccEEEEEcCHHHHHHHHHHHHHHhC
Confidence 3477654334457899999999999887764 25555555 5666555543
No 80
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=25.52 E-value=2.4e+02 Score=21.55 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHhh
Q 024761 28 HQSVSLLKQACLDCGFFYVINH-GISQEFMDEVFTQSK 64 (263)
Q Consensus 28 ~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~ 64 (263)
...++++.+.++++.++++.++ |++...+.++....+
T Consensus 4 ~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~ 41 (155)
T cd00379 4 EELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELR 41 (155)
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHH
Confidence 4568899999999988888875 788877776666544
No 81
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=25.37 E-value=1.2e+02 Score=25.31 Aligned_cols=46 Identities=17% Similarity=0.179 Sum_probs=27.7
Q ss_pred ccc-EeeCCCcchHHHHHHHHHHHHhcce---EEEEcCCCCHHHHHHHHH
Q 024761 16 VLH-CIDLSSPDIHQSVSLLKQACLDCGF---FYVINHGISQEFMDEVFT 61 (263)
Q Consensus 16 ~iP-vIDls~~~~~~~~~~l~~A~~~~GF---f~l~nhgi~~~~~~~~~~ 61 (263)
..| +|.++...-...+..+.+.+.++|| +.|.+||=....++.+.+
T Consensus 72 ~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~~ 121 (237)
T PF02633_consen 72 GFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAAR 121 (237)
T ss_dssp TSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHHH
T ss_pred CCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHHH
Confidence 344 6666544445668888999999998 444569865545554443
No 82
>PF08823 PG_binding_2: Putative peptidoglycan binding domain; InterPro: IPR014927 This entry may be a peptidoglycan binding domain.
Probab=25.11 E-value=1.1e+02 Score=20.76 Aligned_cols=34 Identities=12% Similarity=0.215 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHH
Q 024761 28 HQSVSLLKQACLDCGFFYVINHGISQEFMDEVFT 61 (263)
Q Consensus 28 ~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~ 61 (263)
.+.++.|.++++..||..=.-||.-.+-.++++.
T Consensus 15 ~~~~~evq~~L~~lGyy~g~~~g~~d~a~~~Al~ 48 (74)
T PF08823_consen 15 GDVAREVQEALKRLGYYKGEADGVWDEATEDALR 48 (74)
T ss_pred HHHHHHHHHHHHHcCCccCCCCCcccHHHHHHHH
Confidence 5678999999999999887778876665555554
No 83
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=24.69 E-value=42 Score=21.13 Aligned_cols=24 Identities=4% Similarity=-0.071 Sum_probs=17.0
Q ss_pred EeeCCCCCCCCeEEcCCCCCeEEEEeCchhh
Q 024761 227 ICKDKDAKPQIWEYVPPLKGLVLCHFHFPAL 257 (263)
Q Consensus 227 v~~~~g~~~~~W~~V~p~~g~lvVNvGd~l~ 257 (263)
|++++| +++.|+-.++ +++|+...
T Consensus 10 VlT~dG----eF~~ik~~~~---~~vG~eI~ 33 (56)
T PF12791_consen 10 VLTPDG----EFIKIKRKPG---MEVGQEIE 33 (56)
T ss_pred EEcCCC----cEEEEeCCCC---CcccCEEE
Confidence 456666 4888888887 77777643
No 84
>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD.
Probab=23.52 E-value=1.1e+02 Score=25.60 Aligned_cols=36 Identities=11% Similarity=0.072 Sum_probs=24.1
Q ss_pred cccEeeCCC------cchHHHHHHHHHHHHhc-------ceEEEEcCCC
Q 024761 16 VLHCIDLSS------PDIHQSVSLLKQACLDC-------GFFYVINHGI 51 (263)
Q Consensus 16 ~iPvIDls~------~~~~~~~~~l~~A~~~~-------GFf~l~nhgi 51 (263)
.||++.+.. +...+.++.|.+++.+. -.+.+.|||+
T Consensus 125 ~ip~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~avlL~nHGv 173 (231)
T TIGR00760 125 TIPCTRPMTDEEINGEYELETGKVIVETFEKRGIDPAQIPGVLVHSHGP 173 (231)
T ss_pred ceeeecCCCcccccccchHhHHHHHHHHHhhccCCcccCCEEEEcCCCc
Confidence 588876531 11234567777887775 5789999994
No 85
>PF11548 Receptor_IA-2: Protein-tyrosine phosphatase receptor IA-2; InterPro: IPR021613 IA-2 is a protein-tyrosine phosphatase receptor that upon exocytosis, the cytoplasmic domain is cleaved and moves to the nucleus where it enhances transcription of the insulin gene. The mature exodomain of IA-2 participates in adhesion to the extracellular matrix and is self-proteolyzed in vitro by reactive oxygen species which may be a new shedding mechanism. ; PDB: 2QT7_B 3N01_B 3N4W_B 3NG8_A.
Probab=23.45 E-value=60 Score=23.11 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhCCCCcccccCCccccCCccceeec
Q 024761 155 AKVVARIIALALDLNADFFDKPEILGEPIATLRLL 189 (263)
Q Consensus 155 ~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~ 189 (263)
+.+||+.+|+.|+|+...|.+. ....+.-++|+-
T Consensus 19 G~~l~~~la~~l~l~s~~F~~i-~V~g~avTFrv~ 52 (91)
T PF11548_consen 19 GSRLMEKLAELLHLPSSSFINI-SVVGPAVTFRVR 52 (91)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEE-EEETTEEEEEE-
T ss_pred HHHHHHHHHHHhCCCcccceee-eecCceEEEEec
Confidence 6789999999999999998842 234455556653
No 86
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=23.23 E-value=1.2e+02 Score=18.64 Aligned_cols=26 Identities=12% Similarity=0.084 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCccccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFFD 174 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f~ 174 (263)
++-.+|+..|.++++..+|.+++...
T Consensus 14 eqk~~l~~~i~~~l~~~~g~~~~~v~ 39 (58)
T cd00491 14 EQKRELIERVTEAVSEILGAPEATIV 39 (58)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccEE
Confidence 45678888999999999999876543
No 87
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=23.06 E-value=1.1e+02 Score=19.39 Aligned_cols=26 Identities=8% Similarity=0.160 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCccccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFFD 174 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f~ 174 (263)
+.-.+|+..|.+++++.+|.|++.+.
T Consensus 15 EqK~~L~~~it~a~~~~~~~p~~~v~ 40 (60)
T PRK02289 15 EQKNALAREVTEVVSRIAKAPKEAIH 40 (60)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceEE
Confidence 45678899999999999999877654
No 88
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=22.97 E-value=1.1e+02 Score=19.34 Aligned_cols=26 Identities=12% Similarity=0.262 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCccccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFFD 174 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f~ 174 (263)
++-.+|+..|..++++.||.+.+...
T Consensus 14 e~K~~l~~~it~~~~~~lg~~~~~i~ 39 (60)
T PF01361_consen 14 EQKRELAEAITDAVVEVLGIPPERIS 39 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGGEE
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCeEE
Confidence 45678889999999999999887554
No 89
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=22.84 E-value=1.2e+02 Score=19.49 Aligned_cols=26 Identities=15% Similarity=0.249 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCccccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFFD 174 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f~ 174 (263)
+.-.+|...|.++++..||.+++...
T Consensus 15 eqk~~l~~~it~~l~~~lg~p~~~v~ 40 (64)
T PRK01964 15 EKIKNLIREVTEAISATLDVPKERVR 40 (64)
T ss_pred HHHHHHHHHHHHHHHHHhCcChhhEE
Confidence 45678888999999999999976543
No 90
>PF08699 DUF1785: Domain of unknown function (DUF1785); InterPro: IPR014811 This region is found in argonaute [] proteins and often co-occurs with IPR003103 from INTERPRO and IPR003165 from INTERPRO. ; PDB: 1R6Z_P 3MJ0_A 4EI1_A 4F3T_A 4EI3_A 1R4K_A.
Probab=22.82 E-value=61 Score=20.31 Aligned_cols=24 Identities=25% Similarity=0.437 Sum_probs=20.2
Q ss_pred CceeEeeCCCCCCCCeEEcCCCCCeEEEEe
Q 024761 223 LGLQICKDKDAKPQIWEYVPPLKGLVLCHF 252 (263)
Q Consensus 223 ~GLqv~~~~g~~~~~W~~V~p~~g~lvVNv 252 (263)
+|||++.. -...|.|..+.++|||
T Consensus 19 ~Gle~~rG------~~qSvRp~~~~l~lNv 42 (52)
T PF08699_consen 19 GGLEAWRG------FFQSVRPTQGGLLLNV 42 (52)
T ss_dssp TTEEEEEE------EEEEEEEETTEEEEEE
T ss_pred CcEEEeEe------EEeeeEEcCCCCEEEE
Confidence 58999873 3788999999999998
No 91
>PF11043 DUF2856: Protein of unknown function (DUF2856); InterPro: IPR020500 This phage protein modulates the activity of the host recBCD nuclease and thus protects the linear double stranded DNA from exonuclease degradation [].
Probab=22.18 E-value=1.1e+02 Score=21.08 Aligned_cols=23 Identities=26% Similarity=0.481 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhHhcCCCHHHHhh
Q 024761 54 EFMDEVFTQSKRFFNLPLNEKIK 76 (263)
Q Consensus 54 ~~~~~~~~~~~~fF~lp~e~K~~ 76 (263)
++++.+...-..|.+||.|+|..
T Consensus 21 EVL~~~k~N~D~~~aL~~ETKaE 43 (97)
T PF11043_consen 21 EVLDNIKNNYDAFMALPPETKAE 43 (97)
T ss_pred HHHHHHHHHHHHHHcCChhhHHH
Confidence 56777777778899999999876
No 92
>PF09989 DUF2229: CoA enzyme activase uncharacterised domain (DUF2229); InterPro: IPR018709 Proteins containing this domain include various bacterial hypothetical proteins, as well as CoA enzyme activases. The exact function of this domain has not, as yet, been defined.
Probab=21.95 E-value=2.2e+02 Score=23.77 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=27.8
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhH
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKR 65 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~ 65 (263)
--|+||++....+...+++.+..+..| ++...+.++++.+.+
T Consensus 117 l~p~i~~~~~g~~~~~~~l~~~~~~lg--------~~~~~~~~A~~~A~~ 158 (221)
T PF09989_consen 117 LSPVIDFSNKGKESLAKALYELGKRLG--------ISRKEIRRAFEKALE 158 (221)
T ss_pred EeeeeccCccchHHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHH
Confidence 457888877534556677777666666 577777777665543
No 93
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=21.64 E-value=1.4e+02 Score=18.86 Aligned_cols=25 Identities=16% Similarity=0.190 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFF 173 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f 173 (263)
+.-.+|+..|.++++..||.+++..
T Consensus 15 eqK~~l~~~it~~l~~~lg~~~~~v 39 (63)
T TIGR00013 15 EQKRQLIEGVTEAMAETLGANLESI 39 (63)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccE
Confidence 4556788889999999999997644
No 94
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=20.67 E-value=1.7e+02 Score=24.15 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHh
Q 024761 29 QSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRF 66 (263)
Q Consensus 29 ~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f 66 (263)
+..++|.+++.+.||+.|.+-.++.+.+.+ .++.|
T Consensus 24 ~~~~~~~~~l~~~G~vvlrg~~~~~~~~~~---~~~~~ 58 (258)
T PF02668_consen 24 EELEELREALAEYGFVVLRGFPLDPEQFEA---LASRL 58 (258)
T ss_dssp CHHHHHHHHHHHHSEEEEESCTSSHHHHHH---HHHHH
T ss_pred HHHHHHHHHHhcccEEEEcCCCCCHHHHHH---HHHhh
Confidence 368899999999999999988875554433 44444
No 95
>PRK15331 chaperone protein SicA; Provisional
Probab=20.38 E-value=95 Score=24.77 Aligned_cols=42 Identities=24% Similarity=0.426 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCC
Q 024761 27 IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNL 69 (263)
Q Consensus 27 ~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~l 69 (263)
..+.++.|.+|+.+ |-=.-.-|||+++.++.++..+..||..
T Consensus 9 ~~~~~~~i~~al~~-G~tlk~l~gis~~~le~iY~~Ay~~y~~ 50 (165)
T PRK15331 9 EERVAEMIWDAVSE-GATLKDVHGIPQDMMDGLYAHAYEFYNQ 50 (165)
T ss_pred HHHHHHHHHHHHHC-CCCHHHHhCCCHHHHHHHHHHHHHHHHC
Confidence 35567888888887 5333336899999999999999999964
Done!