Query 024761
Match_columns 263
No_of_seqs 222 out of 1098
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 13:58:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024761.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024761hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 8.3E-61 2.8E-65 420.1 22.5 232 13-258 3-237 (312)
2 1odm_A Isopenicillin N synthas 100.0 8.8E-58 3E-62 403.8 21.4 235 9-258 1-259 (331)
3 1gp6_A Leucoanthocyanidin diox 100.0 1.7E-56 5.8E-61 398.9 20.7 221 15-258 45-277 (356)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 1.1E-56 3.9E-61 394.3 14.7 215 15-258 2-223 (319)
5 3on7_A Oxidoreductase, iron/as 100.0 4E-55 1.4E-59 378.1 20.6 213 15-258 2-220 (280)
6 1dcs_A Deacetoxycephalosporin 100.0 8.3E-56 2.9E-60 387.9 14.5 215 15-258 3-232 (311)
7 3itq_A Prolyl 4-hydroxylase, a 78.8 6.3 0.00021 31.7 7.1 71 157-252 94-179 (216)
8 2opi_A L-fuculose-1-phosphate 75.8 1.4 4.9E-05 35.3 2.5 36 16-51 125-160 (212)
9 2fk5_A Fuculose-1-phosphate al 73.6 3.5 0.00012 32.7 4.3 51 16-66 117-176 (200)
10 3dkq_A PKHD-type hydroxylase S 72.6 3.5 0.00012 33.9 4.1 56 185-253 100-172 (243)
11 2jig_A Prolyl-4 hydroxylase; h 72.6 9.6 0.00033 30.5 6.8 22 44-65 22-43 (224)
12 1e4c_P L-fuculose 1-phosphate 71.2 2.2 7.5E-05 34.2 2.5 36 16-51 122-157 (215)
13 1pvt_A Sugar-phosphate aldolas 69.4 2.9 9.8E-05 34.1 2.9 51 15-65 160-212 (238)
14 2v9l_A Rhamnulose-1-phosphate 66.3 3.1 0.00011 34.8 2.5 50 16-65 179-230 (274)
15 2dbn_A Hypothetical protein YB 63.3 2.9 9.9E-05 37.5 1.8 55 13-68 97-151 (461)
16 2irp_A Putative aldolase class 63.2 4.1 0.00014 32.4 2.6 49 15-64 138-191 (208)
17 1otj_A Alpha-ketoglutarate-dep 62.3 8 0.00028 32.0 4.4 50 14-66 15-64 (283)
18 1oih_A Putative alkylsulfatase 57.3 11 0.00039 31.4 4.5 51 15-68 26-77 (301)
19 3pvj_A Alpha-ketoglutarate-dep 55.9 12 0.00042 31.0 4.4 50 15-67 14-63 (277)
20 3ocr_A Class II aldolase/adduc 53.6 7.6 0.00026 32.4 2.7 49 16-64 156-207 (273)
21 3r1j_A Alpha-ketoglutarate-dep 53.2 15 0.00052 30.9 4.6 51 15-68 20-71 (301)
22 3o2g_A Gamma-butyrobetaine dio 49.8 11 0.00037 33.0 3.3 51 16-69 122-173 (388)
23 1m5a_B Insulin B chain; alpha 47.4 22 0.00075 18.9 2.9 19 28-46 9-27 (30)
24 3m4r_A Uncharacterized protein 46.3 9.5 0.00032 30.7 2.1 34 17-51 156-190 (222)
25 1vm6_A DHPR, dihydrodipicolina 44.0 42 0.0014 27.1 5.6 43 18-63 56-99 (228)
26 3emr_A ECTD; double stranded b 40.6 16 0.00054 30.9 2.7 66 1-68 1-72 (310)
27 2hbt_A EGL nine homolog 1; pro 40.2 46 0.0016 27.1 5.4 35 31-66 16-50 (247)
28 2x4k_A 4-oxalocrotonate tautom 39.2 28 0.00095 20.9 3.2 26 149-174 17-42 (63)
29 3qy9_A DHPR, dihydrodipicolina 38.4 41 0.0014 27.3 4.8 39 29-67 89-127 (243)
30 3ijp_A DHPR, dihydrodipicolina 38.3 33 0.0011 28.7 4.4 16 154-169 186-201 (288)
31 2da7_A Zinc finger homeobox pr 38.1 15 0.00052 23.9 1.7 38 137-174 13-50 (71)
32 4f3y_A DHPR, dihydrodipicolina 36.7 34 0.0012 28.3 4.2 43 19-64 77-120 (272)
33 3abf_A 4-oxalocrotonate tautom 36.4 37 0.0013 20.6 3.5 25 150-174 16-40 (64)
34 4ay7_A Methylcobalamin\: coenz 36.4 71 0.0024 27.1 6.3 42 27-68 303-348 (348)
35 1nx8_A CARC, carbapenem syntha 31.8 15 0.0005 30.2 1.1 45 15-66 17-61 (273)
36 2z7b_A MLR6791 protein; class 30.7 24 0.00083 29.2 2.3 49 16-64 157-216 (270)
37 2opa_A Probable tautomerase YW 30.1 49 0.0017 19.8 3.2 25 149-173 14-38 (61)
38 2iuw_A Alkylated repair protei 29.4 1.6E+02 0.0053 23.6 6.9 62 186-255 128-203 (238)
39 1otf_A 4-oxalocrotonate tautom 29.3 50 0.0017 19.7 3.1 25 149-173 14-38 (62)
40 2qt7_A Receptor-type tyrosine- 29.1 28 0.00096 23.8 1.9 34 155-189 19-52 (91)
41 3tht_A Alkylated DNA repair pr 29.0 1E+02 0.0036 26.4 6.0 58 185-255 199-262 (345)
42 3i3q_A Alpha-ketoglutarate-dep 28.8 2.1E+02 0.0073 22.4 7.7 59 186-255 107-172 (211)
43 3m0z_A Putative aldolase; MCSG 27.1 1.1E+02 0.0039 24.7 5.4 39 26-65 171-210 (249)
44 3eat_X Pyoverdine biosynthesis 26.5 42 0.0014 27.9 3.1 51 15-68 29-81 (293)
45 3m6y_A 4-hydroxy-2-oxoglutarat 26.5 71 0.0024 26.1 4.2 39 26-65 194-233 (275)
46 4hti_A Receptor-type tyrosine- 25.9 43 0.0015 23.3 2.4 35 155-190 26-60 (99)
47 1p9l_A Dihydrodipicolinate red 25.0 1.6E+02 0.0054 23.7 6.2 43 19-64 49-92 (245)
48 1v7z_A Creatininase, creatinin 24.4 65 0.0022 26.3 3.8 43 19-61 87-132 (260)
49 3m20_A 4-oxalocrotonate tautom 24.3 76 0.0026 19.2 3.3 25 149-173 13-37 (62)
50 3ry0_A Putative tautomerase; o 24.0 72 0.0024 19.5 3.2 25 149-173 14-38 (65)
51 3s57_A Alpha-ketoglutarate-dep 23.7 2.3E+02 0.008 21.9 6.9 62 186-255 102-176 (204)
52 3m21_A Probable tautomerase HP 22.2 81 0.0028 19.4 3.2 25 149-173 17-41 (67)
53 3ghf_A Septum site-determining 21.7 46 0.0016 23.8 2.0 36 19-54 51-86 (120)
54 3exc_X Uncharacterized protein 21.5 1.5E+02 0.005 20.0 4.5 48 17-67 7-58 (91)
55 1gyx_A YDCE, B1461, hypothetic 21.2 83 0.0029 20.0 3.1 25 149-173 15-39 (76)
56 3mb2_A 4-oxalocrotonate tautom 20.8 82 0.0028 19.7 3.0 25 149-173 15-39 (72)
57 2rdq_A 1-deoxypentalenic acid 20.6 1.1E+02 0.0036 24.9 4.4 35 32-67 22-56 (288)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=8.3e-61 Score=420.11 Aligned_cols=232 Identities=27% Similarity=0.391 Sum_probs=199.1
Q ss_pred CCCcccEeeCCCc--chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccC-CCCcCcccC
Q 024761 13 AHTVLHCIDLSSP--DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRN-EKHRGYTPL 89 (263)
Q Consensus 13 ~~~~iPvIDls~~--~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~~ 89 (263)
++++||||||+.. ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++||++.
T Consensus 3 ~~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 82 (312)
T 3oox_A 3 STSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPF 82 (312)
T ss_dssp -CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECC
T ss_pred CCCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccc
Confidence 4678999999853 4567799999999999999999999999999999999999999999999998763 458999998
Q ss_pred cccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 024761 90 HDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLN 169 (263)
Q Consensus 90 ~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 169 (263)
+.+.... ....|++|.|+++.+.+.+++. .....+|.||+ .+|+||+++++|+++|.+|+.+||++||++|||+
T Consensus 83 g~e~~~~--~~~~D~kE~~~~~~~~~~~~~~--~~~~~~n~wP~--~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 156 (312)
T 3oox_A 83 GVETAKG--ADHYDLKEFWHMGRDLPPGHRF--RAHMADNVWPA--EIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE 156 (312)
T ss_dssp CCCCSTT--SCSCCCCEEEEECCCCCTTCGG--GGTSCCCCCCT--TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred cceecCC--CCCCCceeeeEeecCCCcCCcc--hhccCCCCCCC--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 8776432 2357999999998654433221 11346899997 4799999999999999999999999999999999
Q ss_pred cccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeEE
Q 024761 170 ADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLVL 249 (263)
Q Consensus 170 ~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~lv 249 (263)
+++|. +.+..+.+.||++||||++.+. .. +|+++|||+|+||||+||+++||||+.++| +|++|+|+||++|
T Consensus 157 ~~~f~--~~~~~~~~~lr~~~Ypp~~~~~-~~-~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g----~W~~V~p~pg~~v 228 (312)
T 3oox_A 157 RDFFK--PTVQDGNSVLRLLHYPPIPKDA-TG-VRAGAHGDINTITLLLGAEEGGLEVLDRDG----QWLPINPPPGCLV 228 (312)
T ss_dssp TTTTH--HHHTTCCCEEEEEEECCCSSCC-C---CEEEECCCSSEEEEECCTTSCEEEECTTS----CEEECCCCSSCEE
T ss_pred HHHHH--HHhcCCcceeeeEecCCCCCCc-CC-cCccceecCceEEEEeEcCcCceEEECCCC----cEEECCCCCCeEE
Confidence 99998 6777788899999999987653 33 999999999999999999999999998776 4999999999999
Q ss_pred EEeCchhhh
Q 024761 250 CHFHFPALL 258 (263)
Q Consensus 250 VNvGd~l~~ 258 (263)
|||||+|+.
T Consensus 229 VNiGD~l~~ 237 (312)
T 3oox_A 229 INIGDMLER 237 (312)
T ss_dssp EEECHHHHH
T ss_pred EEhHHHHHH
Confidence 999999984
No 2
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=8.8e-58 Score=403.79 Aligned_cols=235 Identities=21% Similarity=0.325 Sum_probs=196.7
Q ss_pred CCCCCCCcccEeeCCCc------chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHh-cCCCHHHHhhhccCC
Q 024761 9 IGSKAHTVLHCIDLSSP------DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRF-FNLPLNEKIKVLRNE 81 (263)
Q Consensus 9 ~~s~~~~~iPvIDls~~------~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~ 81 (263)
|+|++..+||||||+.. ++.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 1 m~s~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-- 75 (331)
T 1odm_A 1 MGSVSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-- 75 (331)
T ss_dssp --CCCBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC--
T ss_pred CCcccCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh--
Confidence 78888889999999852 23557899999999999999999999 999999999999 9999999999975
Q ss_pred CCcCcccCcccccCCC----CCCCCCcceehcccccCCCCCCC--CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHH
Q 024761 82 KHRGYTPLHDELLDPD----TQVHGDYKEGYYIGVEVPEGDPE--SEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVA 155 (263)
Q Consensus 82 ~~~GY~~~~~e~~~~~----~~~~~d~~E~f~~~~~~~~~~~~--~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~ 155 (263)
+||++.+.+.+... .....||+|.|+++.+.+.++|. ...++.++|.||..+.+|+||+++++|+++|.+|+
T Consensus 76 --~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~ 153 (331)
T 1odm_A 76 --RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLS 153 (331)
T ss_dssp --TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHH
T ss_pred --cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 89998887654321 01357999999998764433321 12234568999974348999999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccCCccccCCcccee--eccCC------C---CCCCCCCCcceeccccccCceeEEEeCCCCc
Q 024761 156 KVVARIIALALDLNADFFDKPEILGEPIATLR--LLHYE------G---QTSDPSKGIYGAGAHSDFGLITLLATDEVLG 224 (263)
Q Consensus 156 ~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lr--l~~Yp------~---~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~G 224 (263)
.+||++||++|||++++|. +.+..+.+.|| ++||| | |+.+ ....+|+++|||+|+||||+||+++|
T Consensus 154 ~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~-~~~~~g~~~HtD~g~lTlL~qd~v~G 230 (331)
T 1odm_A 154 SALLKGYALALGKEENFFA--RHFKPDDTLASVVLIRYPYLDPYPEAAIKTAA-DGTKLSFEWHEDVSLITVLYQSNVQN 230 (331)
T ss_dssp HHHHHHHHHHTTSCTTTTG--GGCCTTTCCCEEEEEEECCCSSCCGGGCEECT-TSCEEEEEEECCSSSEEEEEECSSCC
T ss_pred HHHHHHHHHHhCCCHHHHH--HHhcCcHHHHHHHHhhCCCcccccccccCCCc-cccccccccccCCCeEEEEeeCCCCC
Confidence 9999999999999999999 67777889999 99999 6 4432 22378999999999999999999999
Q ss_pred eeEeeCCCCCCCCeEEcCCCCCeEEEEeCchhhh
Q 024761 225 LQICKDKDAKPQIWEYVPPLKGLVLCHFHFPALL 258 (263)
Q Consensus 225 Lqv~~~~g~~~~~W~~V~p~~g~lvVNvGd~l~~ 258 (263)
|||++++ + |++|+|+||++||||||+|+.
T Consensus 231 LQV~~~~----g-Wi~V~p~pgalvVNiGD~l~~ 259 (331)
T 1odm_A 231 LQVETAA----G-YQDIEADDTGYLINCGSYMAH 259 (331)
T ss_dssp EEEEETT----E-EEECCCCTTSEEEEECHHHHH
T ss_pred EEEEcCC----C-eEECCCCCCeEEEEccHHHHH
Confidence 9999865 3 999999999999999999984
No 3
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.7e-56 Score=398.91 Aligned_cols=221 Identities=22% Similarity=0.363 Sum_probs=189.6
Q ss_pred CcccEeeCCCc-----c-hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC---CCcC
Q 024761 15 TVLHCIDLSSP-----D-IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE---KHRG 85 (263)
Q Consensus 15 ~~iPvIDls~~-----~-~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~G 85 (263)
.+||||||+.. + +.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... .++|
T Consensus 45 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~G 124 (356)
T 1gp6_A 45 PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124 (356)
T ss_dssp CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSE
T ss_pred CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccc
Confidence 36999999853 1 3457899999999999999999999999999999999999999999999987653 4889
Q ss_pred cccCcccccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 024761 86 YTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALA 165 (263)
Q Consensus 86 Y~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~ 165 (263)
|...+.+. ..+..||+|.|+++.. +.. ...+|.||. .+|+||+++++|+++|.+|+.+||++||++
T Consensus 125 y~~~~~~~----~~~~~d~kE~~~~~~~-----p~~---~~~~~~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~ 190 (356)
T 1gp6_A 125 YGSKLANN----ASGQLEWEDYFFHLAY-----PEE---KRDLSIWPK--TPSDYIEATSEYAKCLRLLATKVFKALSVG 190 (356)
T ss_dssp EECCCCCS----TTCCCCSCEEEEEEEE-----SGG---GCCGGGSCC--SSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCcccC----CCCCCChhheeeeecC-----Ccc---ccccccCCC--cchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98654332 2345799999999853 111 135789997 578999999999999999999999999999
Q ss_pred CCCCcccccCCcccc---CCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcC
Q 024761 166 LDLNADFFDKPEILG---EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVP 242 (263)
Q Consensus 166 Lgl~~~~f~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~ 242 (263)
|||++++|. ..+. .+.+.||++|||||+.+ +..+|+++|||+|+||||+||+++||||++ +| +|++|+
T Consensus 191 Lgl~~~~f~--~~~~~~~~~~~~lrl~~YPp~~~~--~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~-~g----~Wi~V~ 261 (356)
T 1gp6_A 191 LGLEPDRLE--KEVGGLEELLLQMKINYYPKCPQP--ELALGVEAHTDVSALTFILHNMVPGLQLFY-EG----KWVTAK 261 (356)
T ss_dssp TTSCTTHHH--HHTTHHHHCEEEEEEEEECCCSST--TTCCSEEEECCCSSEEEEEECSCCCEEEEE-TT----EEEECC
T ss_pred cCCCHHHHH--HHhcccCCccceeeeeecCCCCCc--ccccCcCCccCCCeEEEEEEcCCCCeEEec-CC----cEEECc
Confidence 999999998 5565 47789999999998754 457899999999999999999999999996 44 599999
Q ss_pred CCCCeEEEEeCchhhh
Q 024761 243 PLKGLVLCHFHFPALL 258 (263)
Q Consensus 243 p~~g~lvVNvGd~l~~ 258 (263)
|+||++||||||+|+.
T Consensus 262 p~pgalvVNiGD~l~~ 277 (356)
T 1gp6_A 262 CVPDSIVMHIGDTLEI 277 (356)
T ss_dssp CCTTCEEEEECHHHHH
T ss_pred CCCCeEEEEeccHHHH
Confidence 9999999999999984
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.1e-56 Score=394.31 Aligned_cols=215 Identities=24% Similarity=0.394 Sum_probs=185.3
Q ss_pred CcccEeeCCCc---chHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCCCCcCcccCcc
Q 024761 15 TVLHCIDLSSP---DIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHD 91 (263)
Q Consensus 15 ~~iPvIDls~~---~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~ 91 (263)
.+||||||+.. ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||.+.+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~~~~~ 79 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALEGVQA 79 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCCcccc
Confidence 46999999953 3567799999999999999999999999999999999999999999999998643 358877654
Q ss_pred cccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Q 024761 92 ELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNAD 171 (263)
Q Consensus 92 e~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 171 (263)
+. +..||+|.|+++.. |. ..+|.||. .+|+||+++++|+++|.+|+.+||++||++|||+++
T Consensus 80 e~------~~~d~ke~~~~~~~-----p~-----~~~~~wP~--~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 141 (319)
T 1w9y_A 80 EV------TDMDWESTFFLKHL-----PI-----SNISEVPD--LDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKG 141 (319)
T ss_dssp CG------GGCCCCEEEEEEEE-----SC-----CGGGGCTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred cC------CCCChhhheeeecC-----Cc-----cccccccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 32 35799999999853 21 24688997 578999999999999999999999999999999999
Q ss_pred cccCCcccc---CCccceeeccCCCCCCCCCCCcceeccccccCceeEEEeC-CCCceeEeeCCCCCCCCeEEcCCCCCe
Q 024761 172 FFDKPEILG---EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATD-EVLGLQICKDKDAKPQIWEYVPPLKGL 247 (263)
Q Consensus 172 ~f~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqv~~~~g~~~~~W~~V~p~~g~ 247 (263)
+|. +.+. .+.+.||++|||||+.+ +..+|+++|||+|+||||+|| +++||||+. +| +|++|+|+||+
T Consensus 142 ~f~--~~~~~~~~~~~~lrl~~YPp~~~~--~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~-~g----~Wi~V~p~pga 212 (319)
T 1w9y_A 142 YLK--NAFYGSKGPNFGTKVSNYPPCPKP--DLIKGLRAHTDAGGIILLFQDDKVSGLQLLK-DG----QWIDVPPMRHS 212 (319)
T ss_dssp HHH--HHHHTTTCCEEEEEEEECCCCSCG--GGGSSCCCBCCSSSEEEEEESSSCCCEEEEE-TT----EEEECCCCTTC
T ss_pred HHH--HHhcCcCCccceeEEEecCCCccc--ccccccccccCCCceEEEEecCCCCeeeEee-CC----eEEEcccCCCc
Confidence 998 5554 35678999999998754 457899999999999999995 799999975 44 59999999999
Q ss_pred EEEEeCchhhh
Q 024761 248 VLCHFHFPALL 258 (263)
Q Consensus 248 lvVNvGd~l~~ 258 (263)
+||||||+||.
T Consensus 213 lvVNiGD~l~~ 223 (319)
T 1w9y_A 213 IVVNLGDQLEV 223 (319)
T ss_dssp EEEEECHHHHH
T ss_pred EEEEhHHHHHH
Confidence 99999999984
No 5
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=4e-55 Score=378.08 Aligned_cols=213 Identities=27% Similarity=0.359 Sum_probs=174.7
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCCHHHHhhhccCC-CCcCcccCc-cc
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE-KHRGYTPLH-DE 92 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~~~-~e 92 (263)
.+||||||+.++ .+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++.... .++||.+.+ .+
T Consensus 2 ~~IPvIDls~~~---~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e 76 (280)
T 3on7_A 2 MKLETIDYRAAD---SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISE 76 (280)
T ss_dssp --CCEEETTSTT---HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC---
T ss_pred CCCCEEECCChh---HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCcccc
Confidence 469999999764 4789999999999999999999999999999999999998 7999986543 589999876 45
Q ss_pred ccCCCCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--c
Q 024761 93 LLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLN--A 170 (263)
Q Consensus 93 ~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~--~ 170 (263)
.... ....|++|.|++. .||. .+|+||+++++|+++|.+|+.+||++||++||++ +
T Consensus 77 ~~~~--~~~~D~kE~~~~~------------------p~~~--~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 134 (280)
T 3on7_A 77 TAKG--HTVKDIKEYYHVY------------------PWGR--IPDSLRANILAYYEKANTLASELLEWIETYSPDEIKA 134 (280)
T ss_dssp -------CCCCSCEEEEEC------------------TTSC--CCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHT
T ss_pred ccCC--CCcccHHHHHhcC------------------CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 4321 2357999999874 1553 4579999999999999999999999999999986 3
Q ss_pred ccccCC-ccccCC-ccceeeccCCCCCCCCCCCcceeccccccCceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeE
Q 024761 171 DFFDKP-EILGEP-IATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLV 248 (263)
Q Consensus 171 ~~f~~~-~~~~~~-~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~l 248 (263)
+++... +.+.++ .+.||++|||||+.+.....+|+++|||+|+||||+||+++||||++++| +|++|+|+||++
T Consensus 135 ~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g----~W~~V~p~pg~~ 210 (280)
T 3on7_A 135 KFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDG----SWLDVPSDFGNI 210 (280)
T ss_dssp TCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTS----CEEECCCCTTCE
T ss_pred hhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCC----CEEECcCCCCEE
Confidence 332210 334444 48999999999986544468999999999999999999999999998776 499999999999
Q ss_pred EEEeCchhhh
Q 024761 249 LCHFHFPALL 258 (263)
Q Consensus 249 vVNvGd~l~~ 258 (263)
|||+||+|+.
T Consensus 211 vVNiGD~l~~ 220 (280)
T 3on7_A 211 IINIGDMLQE 220 (280)
T ss_dssp EEEECHHHHH
T ss_pred EEEcChHHHH
Confidence 9999999984
No 6
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=8.3e-56 Score=387.88 Aligned_cols=215 Identities=20% Similarity=0.262 Sum_probs=170.6
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCCC-HHHHhhhccC--CCCcCcccCcc
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLP-LNEKIKVLRN--EKHRGYTPLHD 91 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~--~~~~GY~~~~~ 91 (263)
.+||||||+........++|.+||++||||||+||||+.++++++++++++||+|| .|+|+++... ..++||.+.+.
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~ 82 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLES 82 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC--
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccc
Confidence 46999999843111112389999999999999999999999999999999999999 9999999765 35899998877
Q ss_pred cccCC--CCCCCCCcceehcccccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-
Q 024761 92 ELLDP--DTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDL- 168 (263)
Q Consensus 92 e~~~~--~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl- 168 (263)
|.+.. ...+..||+|.|+++.. +|.|| +|+||+++++|+++|.+|+.+||++||++|||
T Consensus 83 e~~~~~~~~~~~~d~~E~~~~~~~--------------~n~wP----~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 144 (311)
T 1dcs_A 83 ESTAQITNTGSYSDYSMCYSMGTA--------------DNLFP----SGDFERIWTQYFDRQYTASRAVAREVLRATGTE 144 (311)
T ss_dssp ---------------CEEEEECSS--------------SCCCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccccCCCCCCCcceeeeccCC--------------CCCCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 65410 11245799999999832 68899 58999999999999999999999999999999
Q ss_pred ---CcccccCCccccCCccceeeccCCCCCCCCCCC--cceeccccccCceeEEEeC-CCCc---eeEeeCCCCCCCCeE
Q 024761 169 ---NADFFDKPEILGEPIATLRLLHYEGQTSDPSKG--IYGAGAHSDFGLITLLATD-EVLG---LQICKDKDAKPQIWE 239 (263)
Q Consensus 169 ---~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~--~~g~~~HtD~g~lTlL~qd-~~~G---Lqv~~~~g~~~~~W~ 239 (263)
++++|. +. .+.||++|||||+.+...+ .+|+++|||+|+||||+|| +++| |||++ +| +|+
T Consensus 145 ~~~~~~~f~--~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~-~g----~W~ 213 (311)
T 1dcs_A 145 PDGGVEAFL--DC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV-GG----AFT 213 (311)
T ss_dssp CTTCHHHHH--SC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE-TT----EEE
T ss_pred CcCcHhHHh--hc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe-CC----EEE
Confidence 888887 33 6789999999987653223 6799999999999999999 8999 99998 55 599
Q ss_pred EcCCCCCeEEEEeCchhhh
Q 024761 240 YVPPLKGLVLCHFHFPALL 258 (263)
Q Consensus 240 ~V~p~~g~lvVNvGd~l~~ 258 (263)
+|+|+||++||||||+|+.
T Consensus 214 ~V~p~pg~lvVNiGD~l~~ 232 (311)
T 1dcs_A 214 DLPYRPDAVLVFCGAIATL 232 (311)
T ss_dssp ECCCCTTCEEEEECHHHHH
T ss_pred eCcCCCCeEEEEHHHHHHH
Confidence 9999999999999999984
No 7
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=78.81 E-value=6.3 Score=31.69 Aligned_cols=71 Identities=25% Similarity=0.260 Sum_probs=40.5
Q ss_pred HHHHHHHHhCCCCcccccCCccccCCccceeeccCCCCCCCCCCCcceeccccccC-----------ceeEEEe--C-CC
Q 024761 157 VVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFG-----------LITLLAT--D-EV 222 (263)
Q Consensus 157 ~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d-~~ 222 (263)
+|.+.++..+|++.+..+ .+++++|.+- +. ..+|.|+. .+|+|+- | ..
T Consensus 94 ~i~~Ri~~~~gl~~~~~E----------~lqv~~Y~~G------~~--y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~ 155 (216)
T 3itq_A 94 KIEKRISSIMNVPASHGE----------GLHILNYEVD------QQ--YKAHYDYFAEHSRSAANNRISTLVMYLNDVEE 155 (216)
T ss_dssp HHHHHHHHHHTSCGGGBC----------CCEEEEECBT------CC--EEEECSSCCTTSGGGGGCEEEEEEEECSCCSE
T ss_pred HHHHHHHHhcCceecccc----------ceeEEEeCCC------Cc--cccccCCCcCCCcccCCceEEEEEEecccCCc
Confidence 344444455677643222 3678888762 22 46788864 2777764 2 12
Q ss_pred Cc-eeEeeCCCCCCCCeEEcCCCCCeEEEEe
Q 024761 223 LG-LQICKDKDAKPQIWEYVPPLKGLVLCHF 252 (263)
Q Consensus 223 ~G-Lqv~~~~g~~~~~W~~V~p~~g~lvVNv 252 (263)
|| +.+ ... =+.|+|..|.+|+=-
T Consensus 156 GGeT~F-p~~------~~~V~P~~G~al~f~ 179 (216)
T 3itq_A 156 GGETFF-PKL------NLSVHPRKGMAVYFE 179 (216)
T ss_dssp ECCEEE-TTT------TEEECCCTTCEEEEE
T ss_pred CceeEe-cCC------CCEEecCCCeEEEEe
Confidence 33 433 221 378999999887743
No 8
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=75.82 E-value=1.4 Score=35.26 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=31.3
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGI 51 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi 51 (263)
.||++++..+...+.++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999987776778889999998888999999994
No 9
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=73.57 E-value=3.5 Score=32.66 Aligned_cols=51 Identities=10% Similarity=0.077 Sum_probs=38.4
Q ss_pred cccEe-eCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--H------HHHHHHHHHhhHh
Q 024761 16 VLHCI-DLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--Q------EFMDEVFTQSKRF 66 (263)
Q Consensus 16 ~iPvI-Dls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~------~~~~~~~~~~~~f 66 (263)
.||++ ++..+...+.++.+.+++.+.-.+.|.|||+= - +.+++++..+..+
T Consensus 117 ~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 117 EVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp CEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 69999 88877767778889999988889999999941 2 4566666555443
No 10
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=72.64 E-value=3.5 Score=33.89 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=35.6
Q ss_pred ceeeccCCCCCCCCCCCcceeccccccC-----------ceeEEEe--C----CCCceeEeeCCCCCCCCeEEcCCCCCe
Q 024761 185 TLRLLHYEGQTSDPSKGIYGAGAHSDFG-----------LITLLAT--D----EVLGLQICKDKDAKPQIWEYVPPLKGL 247 (263)
Q Consensus 185 ~lrl~~Yp~~~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d----~~~GLqv~~~~g~~~~~W~~V~p~~g~ 247 (263)
.+++++|.+- . -..+|.|.. .+|+++. + +.|.|.+....+ =..|+|..|.
T Consensus 100 ~~~~~rY~~G------~--~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-----~~~V~P~~G~ 166 (243)
T 3dkq_A 100 PPLFNRYQGG------E--TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-----QQSIKLSAGS 166 (243)
T ss_dssp EEEEEEECTT------C--EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-----EEEECCCTTC
T ss_pred cceEEEECCC------C--eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-----cEEEecCCCE
Confidence 4788899871 1 256787753 4666654 3 124466665433 3679999999
Q ss_pred EEEEeC
Q 024761 248 VLCHFH 253 (263)
Q Consensus 248 lvVNvG 253 (263)
+|+--.
T Consensus 167 ~v~F~s 172 (243)
T 3dkq_A 167 LVLYPS 172 (243)
T ss_dssp EEEEET
T ss_pred EEEECC
Confidence 888544
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=72.56 E-value=9.6 Score=30.46 Aligned_cols=22 Identities=14% Similarity=0.280 Sum_probs=14.6
Q ss_pred EEEEcCCCCHHHHHHHHHHhhH
Q 024761 44 FYVINHGISQEFMDEVFTQSKR 65 (263)
Q Consensus 44 f~l~nhgi~~~~~~~~~~~~~~ 65 (263)
+.+...=++++.++.+.+.++.
T Consensus 22 i~~~~~fLs~~Ec~~li~~~~~ 43 (224)
T 2jig_A 22 AFLLKNFLSDEECDYIVEKARP 43 (224)
T ss_dssp EEEETTCSCHHHHHHHHHHHGG
T ss_pred EEEEcccCCHHHHHHHHHHhhc
Confidence 3444444688888888887764
No 12
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=71.19 E-value=2.2 Score=34.25 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=31.1
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCC
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGI 51 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi 51 (263)
.||++++..+...+.++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999987776677888999998888899999995
No 13
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=69.37 E-value=2.9 Score=34.10 Aligned_cols=51 Identities=8% Similarity=0.057 Sum_probs=37.6
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhhH
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSKR 65 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~~ 65 (263)
..||++++..+...+.++.+.+++++.-.+.+.|||+= -+.+++++..+..
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~~ 212 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVEI 212 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHHH
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 36999999877667778889999988889999999952 2334555544443
No 14
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=66.26 E-value=3.1 Score=34.78 Aligned_cols=50 Identities=14% Similarity=0.077 Sum_probs=37.6
Q ss_pred cccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhhH
Q 024761 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSKR 65 (263)
Q Consensus 16 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~~ 65 (263)
.||++++..+...+.++.+.+++.+.-.+.+.|||+= .+.+++++..+..
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~e~ 230 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDT 230 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 6999999877777788899999999899999999952 2334555544443
No 15
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=63.27 E-value=2.9 Score=37.53 Aligned_cols=55 Identities=7% Similarity=0.038 Sum_probs=39.4
Q ss_pred CCCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcC
Q 024761 13 AHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFN 68 (263)
Q Consensus 13 ~~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 68 (263)
...-||.|||++.....+.++..+..++.|++.|.|. ||.+......+...+|.+
T Consensus 97 G~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 97 GDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TCCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 3467999999865332223455677889999988875 788887777777777754
No 16
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=63.22 E-value=4.1 Score=32.36 Aligned_cols=49 Identities=12% Similarity=0.147 Sum_probs=34.4
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcc---eEEEEcCCCC--HHHHHHHHHHhh
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCG---FFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~G---Ff~l~nhgi~--~~~~~~~~~~~~ 64 (263)
..||+++.. ++..+.++.+.+++.+.+ .+.|.|||+= -+.+++++..+.
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~ 191 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTE 191 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHH
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHH
Confidence 379999985 666677888989998765 7889999942 223445554443
No 17
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=62.34 E-value=8 Score=32.02 Aligned_cols=50 Identities=18% Similarity=0.254 Sum_probs=37.1
Q ss_pred CCcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHh
Q 024761 14 HTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRF 66 (263)
Q Consensus 14 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f 66 (263)
-++|+-||+++.-..+..++|.+++.++|++.+.+-.++.+. ..+.++.|
T Consensus 15 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~ 64 (283)
T 1otj_A 15 GAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRF 64 (283)
T ss_dssp CEEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTT
T ss_pred eEEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHh
Confidence 356888899874334557899999999999999998887653 33455555
No 18
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=57.32 E-value=11 Score=31.45 Aligned_cols=51 Identities=10% Similarity=0.063 Sum_probs=37.3
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCC-CCHHHHHHHHHHhhHhcC
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHG-ISQEFMDEVFTQSKRFFN 68 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhg-i~~~~~~~~~~~~~~fF~ 68 (263)
++|+-||+++.-..+..++|.+++.++|++.+.+-. ++. +...+.++.|=.
T Consensus 26 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 457777887643345578999999999999999988 885 345555666643
No 19
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=55.95 E-value=12 Score=31.01 Aligned_cols=50 Identities=18% Similarity=0.226 Sum_probs=38.1
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhc
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFF 67 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 67 (263)
++|.=||++++-..+..++|.+|+.++|++.+.|-.++.+ +..+.++.|=
T Consensus 14 aei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG 63 (277)
T 3pvj_A 14 AQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFG 63 (277)
T ss_dssp EEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGS
T ss_pred EEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 5788899987434456789999999999999999988764 3445566663
No 20
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=53.62 E-value=7.6 Score=32.37 Aligned_cols=49 Identities=12% Similarity=0.015 Sum_probs=35.5
Q ss_pred cccEeeCCCcc-hHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhh
Q 024761 16 VLHCIDLSSPD-IHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 16 ~iPvIDls~~~-~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~ 64 (263)
.||++|+..+. ..+.++.|.+++.+.-.+.|.|||+= -+.+++++..+.
T Consensus 156 ~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~~ 207 (273)
T 3ocr_A 156 RVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQLH 207 (273)
T ss_dssp TEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred CEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHHH
Confidence 69999998665 45678889899999999999999942 223444444433
No 21
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=53.20 E-value=15 Score=30.94 Aligned_cols=51 Identities=8% Similarity=0.117 Sum_probs=37.8
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHhhHhcC
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINH-GISQEFMDEVFTQSKRFFN 68 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~fF~ 68 (263)
++|+=||++..-..+..++|.+|+.++|.+.+.|- .++.+ +..+.++.|=.
T Consensus 20 aei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~ 71 (301)
T 3r1j_A 20 ARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGT 71 (301)
T ss_dssp EEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSC
T ss_pred ceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCC
Confidence 56777899843345567899999999999999998 78765 33455666633
No 22
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=49.84 E-value=11 Score=33.03 Aligned_cols=51 Identities=16% Similarity=0.056 Sum_probs=38.3
Q ss_pred cccEeeCCCcc-hHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcCC
Q 024761 16 VLHCIDLSSPD-IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNL 69 (263)
Q Consensus 16 ~iPvIDls~~~-~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~l 69 (263)
++|.||+++.- ..+..+++.+|+.++|++.+.|-.++.+ ...+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 78999998542 3456789999999999999999988754 344556666443
No 23
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=47.37 E-value=22 Score=18.93 Aligned_cols=19 Identities=37% Similarity=0.662 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHhcceEEE
Q 024761 28 HQSVSLLKQACLDCGFFYV 46 (263)
Q Consensus 28 ~~~~~~l~~A~~~~GFf~l 46 (263)
.+.++.+.-.|.+-||||-
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 4567888899999999984
No 24
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=46.29 E-value=9.5 Score=30.68 Aligned_cols=34 Identities=9% Similarity=0.121 Sum_probs=28.1
Q ss_pred ccEeeCCCcchHHHHHHHHHHHHhc-ceEEEEcCCC
Q 024761 17 LHCIDLSSPDIHQSVSLLKQACLDC-GFFYVINHGI 51 (263)
Q Consensus 17 iPvIDls~~~~~~~~~~l~~A~~~~-GFf~l~nhgi 51 (263)
||++++..+.. +.+++|.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 89999987766 7788999999864 6788999994
No 25
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=43.96 E-value=42 Score=27.11 Aligned_cols=43 Identities=21% Similarity=0.281 Sum_probs=29.0
Q ss_pred cEeeCCCcchHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHh
Q 024761 18 HCIDLSSPDIHQSVSLLKQACLDCGFFYVINH-GISQEFMDEVFTQS 63 (263)
Q Consensus 18 PvIDls~~~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~ 63 (263)
-+|||+.|+. +....+.|.+.|.=.|++. |.+++..+.+.+++
T Consensus 56 VvIDFT~P~a---~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a 99 (228)
T 1vm6_A 56 VVIDFSSPEA---LPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELS 99 (228)
T ss_dssp EEEECSCGGG---HHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHT
T ss_pred EEEECCCHHH---HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHH
Confidence 4899998764 4445577777788777754 77776665555443
No 26
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=40.58 E-value=16 Score=30.89 Aligned_cols=66 Identities=14% Similarity=0.106 Sum_probs=43.8
Q ss_pred CCccccCCCCCCCCCcccEeeC---CCcc-h--HHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhcC
Q 024761 1 MENYEQSKIGSKAHTVLHCIDL---SSPD-I--HQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFN 68 (263)
Q Consensus 1 ~~~~~~~~~~s~~~~~iPvIDl---s~~~-~--~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 68 (263)
|++.|++.+++.+.. +|-.|- +... . ..+.++-.+.+++.||+.|.|- ++.+.++++.+...++++
T Consensus 1 ~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~LT~eqi~~f~~dGyvvi~~~-ls~eev~~lr~~i~~~~~ 72 (310)
T 3emr_A 1 MEDLYPSRQNNQPKI-LKRKDPVIYTDRSKDNQAPITKEQLDSYEKNGFLQIKNF-FSEDEVIDMQKAIFELQD 72 (310)
T ss_dssp CCCSSCCSSSSSCEE-EECCSCSSCSCGGGGGGSSSCHHHHHHHHHHSEEEETTC-SCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCcccc-ccCCCCeecCCCCcCCCCCCCHHHHHHHHhCCEEEccCC-CCHHHHHHHHHHHHHHHh
Confidence 778899988766543 444443 2211 1 1123344578899999998764 788899999888877654
No 27
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=40.23 E-value=46 Score=27.05 Aligned_cols=35 Identities=9% Similarity=0.135 Sum_probs=28.7
Q ss_pred HHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHh
Q 024761 31 VSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRF 66 (263)
Q Consensus 31 ~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f 66 (263)
...|..++.+.|++.+.|- ++++.++.+.+.++.+
T Consensus 16 ~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~ 50 (247)
T 2hbt_A 16 LEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRAL 50 (247)
T ss_dssp HHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhh
Confidence 4678899999999887665 8899999998887763
No 28
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=39.22 E-value=28 Score=20.91 Aligned_cols=26 Identities=8% Similarity=0.084 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCccccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFFD 174 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f~ 174 (263)
+.-.+|+..|.+++++.||.|+++..
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p~~~v~ 42 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGANRQAIH 42 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccEE
Confidence 34568899999999999999987554
No 29
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=38.37 E-value=41 Score=27.33 Aligned_cols=39 Identities=8% Similarity=0.214 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhc
Q 024761 29 QSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFF 67 (263)
Q Consensus 29 ~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 67 (263)
+..++|.++|++.+.++--|-.+.-.++.++.+.+.++|
T Consensus 89 e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l 127 (243)
T 3qy9_A 89 KLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLL 127 (243)
T ss_dssp HHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhc
Confidence 346777888888888777787777777777766665554
No 30
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=38.35 E-value=33 Score=28.71 Aligned_cols=16 Identities=13% Similarity=0.106 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHhCCCC
Q 024761 154 VAKVVARIIALALDLN 169 (263)
Q Consensus 154 l~~~ll~~la~~Lgl~ 169 (263)
.+.+|.+.++++++.+
T Consensus 186 TA~~la~~i~~~~~~~ 201 (288)
T 3ijp_A 186 TALLLGQAAAEGRNIM 201 (288)
T ss_dssp HHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhCCC
Confidence 4556667777777754
No 31
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.09 E-value=15 Score=23.89 Aligned_cols=38 Identities=13% Similarity=0.176 Sum_probs=32.8
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccc
Q 024761 137 LPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFD 174 (263)
Q Consensus 137 ~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 174 (263)
+.+-+..++.||..-.+-...-+..||..+||+.+...
T Consensus 13 ~k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVr 50 (71)
T 2da7_A 13 YKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 50 (71)
T ss_dssp STHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHH
Confidence 56789999999999988888889999999999987443
No 32
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=36.74 E-value=34 Score=28.29 Aligned_cols=43 Identities=21% Similarity=0.233 Sum_probs=21.4
Q ss_pred EeeCCCcchHHHHHHHHHHHHhcceEEEE-cCCCCHHHHHHHHHHhh
Q 024761 19 CIDLSSPDIHQSVSLLKQACLDCGFFYVI-NHGISQEFMDEVFTQSK 64 (263)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~GFf~l~-nhgi~~~~~~~~~~~~~ 64 (263)
+||++.++. ..++...|.+.|.=.|+ ..|.+++..+++.++++
T Consensus 77 VIDfT~p~a---~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~ 120 (272)
T 4f3y_A 77 LIDFTLPEG---TLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGE 120 (272)
T ss_dssp EEECSCHHH---HHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTT
T ss_pred EEEcCCHHH---HHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhc
Confidence 678875432 23344445555554444 34555555555544443
No 33
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=36.42 E-value=37 Score=20.56 Aligned_cols=25 Identities=8% Similarity=0.053 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCccccc
Q 024761 150 EALEVAKVVARIIALALDLNADFFD 174 (263)
Q Consensus 150 ~~~~l~~~ll~~la~~Lgl~~~~f~ 174 (263)
+-.+++..|.+++++.||.++++..
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~v~ 40 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEEVR 40 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccEE
Confidence 3467889999999999999987553
No 34
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=36.37 E-value=71 Score=27.11 Aligned_cols=42 Identities=14% Similarity=0.120 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHhcceEEEEcCCCC----HHHHHHHHHHhhHhcC
Q 024761 27 IHQSVSLLKQACLDCGFFYVINHGIS----QEFMDEVFTQSKRFFN 68 (263)
Q Consensus 27 ~~~~~~~l~~A~~~~GFf~l~nhgi~----~~~~~~~~~~~~~fF~ 68 (263)
.++..+++.+.++.-||+.=-+|||+ .+-+..+.+++++|++
T Consensus 303 ~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 303 VDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 34555667777788888777789976 4679999999999985
No 35
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=31.77 E-value=15 Score=30.19 Aligned_cols=45 Identities=16% Similarity=0.194 Sum_probs=33.3
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHh
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRF 66 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f 66 (263)
++|+-||+++. . .++|.+++.++|++.+.+-.++.+ ...+.++.|
T Consensus 17 a~i~g~dl~~~-~---~~~l~~~l~~~G~v~~rg~~~~~~---~~~~~~~~~ 61 (273)
T 1nx8_A 17 AYIDHRDFLEA-K---TETIKNLLMRQGFVVVKNLDIDSD---TFRDIYSAY 61 (273)
T ss_dssp EEECHHHHHHS-C---HHHHHHHHHHHCEEEECSCCCCHH---HHHHHHHTT
T ss_pred EEEECCCcccC-C---HHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHh
Confidence 45666777765 3 788999999999999999888754 344455555
No 36
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=30.68 E-value=24 Score=29.16 Aligned_cols=49 Identities=8% Similarity=0.088 Sum_probs=33.1
Q ss_pred cccEeeCCC---------cchHHHHHHHHHHHHhcceEEEEcCCCC--HHHHHHHHHHhh
Q 024761 16 VLHCIDLSS---------PDIHQSVSLLKQACLDCGFFYVINHGIS--QEFMDEVFTQSK 64 (263)
Q Consensus 16 ~iPvIDls~---------~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~~~~~~~~~~~~ 64 (263)
.||++++.. +...+.++.|.+++.+.-.+.|.|||+= -+.+++++..+.
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~~~~G~tl~eA~~~~~ 216 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGVVNVGKSVREVVFRAF 216 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCceEEEeCCHHHHHHHHH
Confidence 699999641 1245678889999988888999999942 223444444433
No 37
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=30.10 E-value=49 Score=19.77 Aligned_cols=25 Identities=4% Similarity=0.084 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFF 173 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f 173 (263)
+.-.+|+..|.++++..||++++..
T Consensus 14 eqk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 14 EQKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCcCeE
Confidence 3456889999999999999997643
No 38
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=29.42 E-value=1.6e+02 Score=23.61 Aligned_cols=62 Identities=16% Similarity=0.023 Sum_probs=35.2
Q ss_pred eeeccCCCCCCCCCCCcceeccccccC--------ceeEEEeCCCCceeEeeCCCC------CCCCeEEcCCCCCeEEEE
Q 024761 186 LRLLHYEGQTSDPSKGIYGAGAHSDFG--------LITLLATDEVLGLQICKDKDA------KPQIWEYVPPLKGLVLCH 251 (263)
Q Consensus 186 lrl~~Yp~~~~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLqv~~~~g~------~~~~W~~V~p~~g~lvVN 251 (263)
.-+|+|.+- .-++++|.|-- +.||=+-. ..=+.+...... .....+.+.-.+|.++|.
T Consensus 128 ~LvN~Y~~G-------~d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM 199 (238)
T 2iuw_A 128 LLCNLYRNE-------KDSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM 199 (238)
T ss_dssp EEEEEECST-------TCCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEE
T ss_pred EEEEEECCC-------CCceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEE
Confidence 457889862 22588899842 22222211 122344332210 002588999999999998
Q ss_pred eCch
Q 024761 252 FHFP 255 (263)
Q Consensus 252 vGd~ 255 (263)
-|+.
T Consensus 200 ~G~~ 203 (238)
T 2iuw_A 200 EGAT 203 (238)
T ss_dssp EETH
T ss_pred Chhh
Confidence 8874
No 39
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=29.33 E-value=50 Score=19.74 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFF 173 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f 173 (263)
+.-.+|+..|.+++.+.||.+++..
T Consensus 14 e~k~~l~~~i~~~l~~~lg~p~~~v 38 (62)
T 1otf_A 14 EQKETLIRQVSEAMANSLDAPLERV 38 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccE
Confidence 3456888999999999999997643
No 40
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=29.09 E-value=28 Score=23.80 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCCCCcccccCCccccCCccceeec
Q 024761 155 AKVVARIIALALDLNADFFDKPEILGEPIATLRLL 189 (263)
Q Consensus 155 ~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~ 189 (263)
+.+||+.+|+.|+++..+|.+. ....+.-++|+-
T Consensus 19 G~~l~~~la~ll~l~~~~Ft~i-~V~g~aVTFrV~ 52 (91)
T 2qt7_A 19 GVKLLEILAEHVHMSSGSFINI-SVVGPALTFRIR 52 (91)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEE-EEETTEEEEEEC
T ss_pred HHHHHHHHHHHhcCCccceeee-EeecceEEEEec
Confidence 6789999999999999999832 234566667763
No 41
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=28.97 E-value=1e+02 Score=26.37 Aligned_cols=58 Identities=19% Similarity=0.151 Sum_probs=36.9
Q ss_pred ceeeccCCCCCCCCCCCcceeccccccC------ceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeEEEEeCch
Q 024761 185 TLRLLHYEGQTSDPSKGIYGAGAHSDFG------LITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLVLCHFHFP 255 (263)
Q Consensus 185 ~lrl~~Yp~~~~~~~~~~~g~~~HtD~g------~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~lvVNvGd~ 255 (263)
..-+|.|.+ +. ++++|.|-. .+||=+- ...=+.+...++ .++.+.-.+|+++|.-|+.
T Consensus 199 ~~lvN~Y~~-------G~-~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~----~~~~l~L~~gsLlvM~G~~ 262 (345)
T 3tht_A 199 QMTINQYEP-------GQ-GIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDG----IAVPVMLPRRSLLVMTGES 262 (345)
T ss_dssp EEEEEEECT-------TC-CEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTS----CEEEEEECTTEEEEECTHH
T ss_pred EEEEEEecC-------CC-CEeeccCCchhcCCeEEEEECC-CceeEEEccCCC----ceEEEEcCCCcEEEEChHH
Confidence 356788876 22 688999974 2222221 122345554443 4889999999999998875
No 42
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=28.82 E-value=2.1e+02 Score=22.45 Aligned_cols=59 Identities=14% Similarity=-0.002 Sum_probs=35.0
Q ss_pred eeeccCCCCCCCCCCCcceecccccc-----C--ceeEEEeCCCCceeEeeCCCCCCCCeEEcCCCCCeEEEEeCch
Q 024761 186 LRLLHYEGQTSDPSKGIYGAGAHSDF-----G--LITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGLVLCHFHFP 255 (263)
Q Consensus 186 lrl~~Yp~~~~~~~~~~~g~~~HtD~-----g--~lTlL~qd~~~GLqv~~~~g~~~~~W~~V~p~~g~lvVNvGd~ 255 (263)
.-+|+|.+ +. +++.|.|- + ++||-+- ...=+.+.... ..+..+.+.-.+|.++|.-|+.
T Consensus 107 ~LvN~Y~~-------G~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~--~~~~~~~i~L~~GsllvM~G~~ 172 (211)
T 3i3q_A 107 CLINRYAP-------GA-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLK--RNDPLKRLLLEHGDVVVWGGES 172 (211)
T ss_dssp EEEEEECT-------TC-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSS--TTSCCEEEEECTTCEEEECGGG
T ss_pred EEEEEEcC-------CC-CcccccCCCccccCCCEEEEECC-CCeEEEEeccc--CCCceEEEECCCCCEEEECchH
Confidence 45788886 23 78999992 2 1222222 11234443321 1124788888999999998875
No 43
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=27.09 E-value=1.1e+02 Score=24.66 Aligned_cols=39 Identities=18% Similarity=0.318 Sum_probs=30.6
Q ss_pred chHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHhhH
Q 024761 26 DIHQSVSLLKQACLDCGFFYVINH-GISQEFMDEVFTQSKR 65 (263)
Q Consensus 26 ~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~ 65 (263)
...++.+.+.+||.+.|| ++.-. ||+.+-+..+.+.+.+
T Consensus 171 ~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 171 KHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp TTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHHH
Confidence 457778999999999999 76655 6998877777766543
No 44
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=26.49 E-value=42 Score=27.89 Aligned_cols=51 Identities=10% Similarity=-0.029 Sum_probs=34.5
Q ss_pred CcccEeeCCCcchHHHHHHHHHHHHhcceEEEEcCC-C-CHHHHHHHHHHhhHhcC
Q 024761 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHG-I-SQEFMDEVFTQSKRFFN 68 (263)
Q Consensus 15 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhg-i-~~~~~~~~~~~~~~fF~ 68 (263)
++|.=||++.+-..+..++|.+++.++|++.+.+-. + +.+ +..+.++.|=.
T Consensus 29 aeI~gvdl~~~l~~~~~~~L~~~l~~~gvv~fRgq~~l~~~~---~~~~~a~~fG~ 81 (293)
T 3eat_X 29 LLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAE---SLTRYCHDFGE 81 (293)
T ss_dssp EEEEESSTTCBGGGSCHHHHHHHHHHHSEEEECSCBCCSSHH---HHHHHHHHHSC
T ss_pred eEEECCCCCcCcCHHHHHHHHHHHHHhCEEEECCCCCCCCHH---HHHHHHHHhCC
Confidence 346667887432333478899999999999999976 5 443 44455666643
No 45
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=26.47 E-value=71 Score=26.15 Aligned_cols=39 Identities=18% Similarity=0.341 Sum_probs=30.8
Q ss_pred chHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHhhH
Q 024761 26 DIHQSVSLLKQACLDCGFFYVINH-GISQEFMDEVFTQSKR 65 (263)
Q Consensus 26 ~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~ 65 (263)
...++.+.+.+||.+.|| ++.-. ||+.+-++.+.+.+.+
T Consensus 194 ~~leEl~avAkAca~~g~-~lEPTGGIdl~Nf~~I~~i~l~ 233 (275)
T 3m6y_A 194 AHEEEYRAVAKACAEEGF-ALEPTGGIDKENFETIVRIALE 233 (275)
T ss_dssp TTHHHHHHHHHHHHHHTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCc-eECCCCCccHhHHHHHHHHHHH
Confidence 457778999999999999 66655 6998877777776554
No 46
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=25.92 E-value=43 Score=23.27 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCCCCcccccCCccccCCccceeecc
Q 024761 155 AKVVARIIALALDLNADFFDKPEILGEPIATLRLLH 190 (263)
Q Consensus 155 ~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~ 190 (263)
+.+|++.+|..|+++..+|.+. ....+.-++|+.-
T Consensus 26 G~~l~~~la~~l~l~~~~F~~i-sV~g~aVTFrV~~ 60 (99)
T 4hti_A 26 GRRLVEDVARLLQVPSSAFADV-EVLGPAVTFKVSA 60 (99)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEE-EEETTEEEEEECC
T ss_pred HHHHHHHHHHHhCCchhheeee-eecCceEEEEecc
Confidence 6789999999999999988742 2345566677643
No 47
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=25.02 E-value=1.6e+02 Score=23.74 Aligned_cols=43 Identities=26% Similarity=0.338 Sum_probs=0.0
Q ss_pred EeeCCCcchHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHhh
Q 024761 19 CIDLSSPDIHQSVSLLKQACLDCGFFYVINH-GISQEFMDEVFTQSK 64 (263)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~ 64 (263)
+||++.++. ..++..+|.+.|.=.|+.. |.+.+..+.+.++++
T Consensus 49 vIDfT~p~a---~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~ 92 (245)
T 1p9l_A 49 VIDFTHPDV---VMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLV 92 (245)
T ss_dssp EEECSCTTT---HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHH
T ss_pred EEEccChHH---HHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHH
No 48
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=24.43 E-value=65 Score=26.31 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=30.1
Q ss_pred EeeCCCcchHHHHHHHHHHHHhcc---eEEEEcCCCCHHHHHHHHH
Q 024761 19 CIDLSSPDIHQSVSLLKQACLDCG---FFYVINHGISQEFMDEVFT 61 (263)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~G---Ff~l~nhgi~~~~~~~~~~ 61 (263)
+|.++...-......|.+.+.++| ++.|.+||=....++.+.+
T Consensus 87 Tisl~~~tl~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~a~~ 132 (260)
T 1v7z_A 87 TTSLDGATLTGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGID 132 (260)
T ss_dssp CBCBCHHHHHHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHHHHH
T ss_pred eEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHHHHH
Confidence 566654444566888999999999 6777789966655555544
No 49
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=24.31 E-value=76 Score=19.25 Aligned_cols=25 Identities=8% Similarity=0.104 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFF 173 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f 173 (263)
+.-.+|...|.++++..||.+++..
T Consensus 13 eqK~~L~~~it~~~~~~lg~~~~~v 37 (62)
T 3m20_A 13 GKKREFVERLTSVAAEIYGMDRSAI 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceE
Confidence 3456888999999999999997654
No 50
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=24.04 E-value=72 Score=19.50 Aligned_cols=25 Identities=12% Similarity=0.116 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFF 173 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f 173 (263)
+.-.+|+..|.+++.+.||.+++..
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~v 38 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEAV 38 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccE
Confidence 4567889999999999999997643
No 51
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=23.70 E-value=2.3e+02 Score=21.94 Aligned_cols=62 Identities=11% Similarity=0.023 Sum_probs=35.1
Q ss_pred eeeccCCCCCCCCCCCcceeccccccC-------c-eeEEEeCCCCceeEeeCCCC-----CCCCeEEcCCCCCeEEEEe
Q 024761 186 LRLLHYEGQTSDPSKGIYGAGAHSDFG-------L-ITLLATDEVLGLQICKDKDA-----KPQIWEYVPPLKGLVLCHF 252 (263)
Q Consensus 186 lrl~~Yp~~~~~~~~~~~g~~~HtD~g-------~-lTlL~qd~~~GLqv~~~~g~-----~~~~W~~V~p~~g~lvVNv 252 (263)
.-+|+|.+- .-+++.|.|-. . ++|=+- ...=+.+....+. .....+.+.-.+|.++|.-
T Consensus 102 ~LvN~Y~~G-------~d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 102 VLINRYKDG-------SDHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp EEEEEESST-------TCCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred eEEEEECCC-------CCcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 457888872 22578899862 1 122221 1123444432110 1124788888999999998
Q ss_pred Cch
Q 024761 253 HFP 255 (263)
Q Consensus 253 Gd~ 255 (263)
|+.
T Consensus 174 g~~ 176 (204)
T 3s57_A 174 HPT 176 (204)
T ss_dssp TTH
T ss_pred chh
Confidence 865
No 52
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=22.19 E-value=81 Score=19.41 Aligned_cols=25 Identities=12% Similarity=0.202 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFF 173 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f 173 (263)
+.-.+|...|.++++..||.+++..
T Consensus 17 eqK~~l~~~lt~~l~~~lg~p~~~v 41 (67)
T 3m21_A 17 EQKQQLIEGVSDLMVKVLNKNKASI 41 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHCcCcccE
Confidence 4456888899999999999987643
No 53
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=21.66 E-value=46 Score=23.83 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=22.2
Q ss_pred EeeCCCcchHHHHHHHHHHHHhcceEEEEcCCCCHH
Q 024761 19 CIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQE 54 (263)
Q Consensus 19 vIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~ 54 (263)
|||++.........+|.+.|+++|+.-|--.|.+.+
T Consensus 51 VlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 567763321112567778888888888766665544
No 54
>3exc_X Uncharacterized protein; ferredoxin fold, double split beta-alpha-beta fold, dimer, C aspartate, RNA'ASE, hydrolase; 2.25A {Sulfolobus solfataricus} SCOP: d.58.58.0
Probab=21.53 E-value=1.5e+02 Score=19.97 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=30.7
Q ss_pred ccEeeCCCcchHHHHHHHHHHHHhcceEEEEcC----CCCHHHHHHHHHHhhHhc
Q 024761 17 LHCIDLSSPDIHQSVSLLKQACLDCGFFYVINH----GISQEFMDEVFTQSKRFF 67 (263)
Q Consensus 17 iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nh----gi~~~~~~~~~~~~~~fF 67 (263)
|=+-|+++..+ ..++.+.|+++||..|-+. -+++.....+....+...
T Consensus 7 lV~YDI~~~kr---r~kv~k~l~~yGl~rvQ~SVFe~~lt~~~~~~L~~~L~~~i 58 (91)
T 3exc_X 7 LVVYDVSDDSK---RNKLANNLKKLGLERIQRSAFEGDMDSQRMKDLVRVVKLIV 58 (91)
T ss_dssp EEEEECCSHHH---HHHHHHHHHHTTCEEEETTEEEEECC--CHHHHHHHHHHHS
T ss_pred EEEEeCCCchH---HHHHHHHHHHhCCccceeeEEEEECCHHHHHHHHHHHHHhc
Confidence 44567765433 4789999999999887764 266665666655555443
No 55
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=21.24 E-value=83 Score=20.00 Aligned_cols=25 Identities=16% Similarity=0.185 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFF 173 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f 173 (263)
+.-.+|+..|.+++++.||.+++..
T Consensus 15 eqk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 15 QQKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCCceE
Confidence 3457889999999999999997643
No 56
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=20.78 E-value=82 Score=19.74 Aligned_cols=25 Identities=20% Similarity=0.255 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccc
Q 024761 149 QEALEVAKVVARIIALALDLNADFF 173 (263)
Q Consensus 149 ~~~~~l~~~ll~~la~~Lgl~~~~f 173 (263)
+.-.+|...|.+++++.||.+++..
T Consensus 15 eqK~~L~~~it~~l~~~lg~p~~~v 39 (72)
T 3mb2_A 15 EQKAELARALSAAAAAAFDVPLAEV 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccE
Confidence 4457888999999999999997644
No 57
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=20.55 E-value=1.1e+02 Score=24.90 Aligned_cols=35 Identities=14% Similarity=0.326 Sum_probs=28.5
Q ss_pred HHHHHHHHhcceEEEEcCCCCHHHHHHHHHHhhHhc
Q 024761 32 SLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFF 67 (263)
Q Consensus 32 ~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 67 (263)
+++.+.+++.||+.|.|- ++.+.++++.+...+++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~ 56 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGL 56 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHH
Confidence 346788899999999875 78899999888877764
Done!