BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024762
(263 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB OS=Arabidopsis thaliana
GN=DPB PE=1 SV=1
Length = 385
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/231 (82%), Positives = 204/231 (88%), Gaps = 7/231 (3%)
Query: 24 ATRSWGTTVSGQSVSTSGSVGSPSQ------SMATPASDSTFLRLNHLDIHGDDAGSQGA 77
+TRSWGT VSGQSVSTSGS+GSPS ++ T SD+TF RLN+LDI GDDAGSQGA
Sbjct: 23 STRSWGTAVSGQSVSTSGSMGSPSSRSEQTITVVTSTSDTTFQRLNNLDIQGDDAGSQGA 82
Query: 78 VVGGKKKKRGQRAGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSL 137
G KKKKRGQRA G DK+GRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFA P+N
Sbjct: 83 -SGVKKKKRGQRAAGPDKTGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFALPNNDG 141
Query: 138 ATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGL 197
+PDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQW+GLPRTSL+DIEELK ERL L
Sbjct: 142 TSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWRGLPRTSLSDIEELKNERLSL 201
Query: 198 RNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSSGNAPSGGVALPFILVQV 248
RNRIEKKTAY QELE+Q+VGLQNLIQRNE LYSSGNAPSGGVALPFILVQ
Sbjct: 202 RNRIEKKTAYSQELEEQYVGLQNLIQRNEHLYSSGNAPSGGVALPFILVQT 252
>sp|Q14186|TFDP1_HUMAN Transcription factor Dp-1 OS=Homo sapiens GN=TFDP1 PE=1 SV=1
Length = 410
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 120/173 (69%), Gaps = 4/173 (2%)
Query: 87 GQRAGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYD 146
G+R G+K+G+GLR FSMKVCEKV+ KG T+YNEVADELVAEF+ N + P++ YD
Sbjct: 103 GKRNRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADNHI-LPNESAYD 161
Query: 147 EKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTA 206
+KNIRRRVYDALNVLMAM+IISK+KKEI+W GLP S + + L+ ER RI++K +
Sbjct: 162 QKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQS 221
Query: 207 YLQELEDQFVGLQNLIQRN---ERLYSSGNAPSGGVALPFILVQVDIRQLFSC 256
LQEL Q + +NL+QRN E+ S P+ + LPFI+V + + C
Sbjct: 222 QLQELILQQIAFKNLVQRNRHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDC 274
>sp|Q17QZ4|TFDP1_BOVIN Transcription factor Dp-1 OS=Bos taurus GN=TFDP1 PE=2 SV=1
Length = 410
Score = 178 bits (451), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 120/173 (69%), Gaps = 4/173 (2%)
Query: 87 GQRAGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYD 146
G+R G+K+G+GLR FSMKVCEKV+ KG T+YNEVADELVAEF+ ++S P + YD
Sbjct: 103 GKRNRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSA-ADSHILPSESAYD 161
Query: 147 EKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTA 206
+KNIRRRVYDALNVLMAM+IISK+KKEI+W GLP S + + L+ ER RI++K +
Sbjct: 162 QKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQSLEVERQRRLERIKQKQS 221
Query: 207 YLQELEDQFVGLQNLIQRN---ERLYSSGNAPSGGVALPFILVQVDIRQLFSC 256
LQEL Q + +NL+QRN E+ S P+ + LPFI+V + + C
Sbjct: 222 QLQELILQQIAFKNLVQRNRQVEQQASRPPPPNSVIHLPFIIVNTSKKTVIDC 274
>sp|Q08639|TFDP1_MOUSE Transcription factor Dp-1 OS=Mus musculus GN=Tfdp1 PE=1 SV=1
Length = 410
Score = 177 bits (449), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 119/173 (68%), Gaps = 4/173 (2%)
Query: 87 GQRAGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYD 146
G+R G+K+G+GLR FSMKVCEKV+ KG T+YNEVADELVAEF+ N + P++ YD
Sbjct: 103 GKRNRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADNHI-LPNESAYD 161
Query: 147 EKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTA 206
+KNIRRRVYDALNVLMAM+IISK+KKEI+W GLP S + + L+ ER RI++K +
Sbjct: 162 QKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQS 221
Query: 207 YLQELEDQFVGLQNLIQRN---ERLYSSGNAPSGGVALPFILVQVDIRQLFSC 256
LQEL Q + +NL+QRN E+ P+ + LPFI+V + + C
Sbjct: 222 QLQELILQQIAFKNLVQRNRQAEQQARRPPPPNSVIHLPFIIVNTSRKTVIDC 274
>sp|Q14188|TFDP2_HUMAN Transcription factor Dp-2 OS=Homo sapiens GN=TFDP2 PE=1 SV=2
Length = 446
Score = 170 bits (431), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/240 (44%), Positives = 146/240 (60%), Gaps = 28/240 (11%)
Query: 35 QSVSTSGSV--GSPSQSMATPASDSTFLRLNHLDIHGDDAGSQGAVVGGKKKKR------ 86
Q +++SGSV GSP TPA + H+ A + G V G +K+ R
Sbjct: 68 QRLTSSGSVLIGSP----YTPAP--AMVTQTHI------AEATGWVPGDRKRARKFIDSD 115
Query: 87 ---GQRAGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQ 143
+R+ GDK+G+GLR FSMKVCEKV+ KG T+YNEVADELV+EF + +N LA
Sbjct: 116 FSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAA--DS 173
Query: 144 QYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEK 203
YD+KNIRRRVYDALNVLMAM+IISK+KKEI+W GLP S + + L+ E+ RI++
Sbjct: 174 AYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQ 233
Query: 204 KTAYLQELEDQFVGLQNLIQRNERLYSSGNAP---SGGVALPFILVQVDIRQLFSCIMAS 260
K A LQEL Q + +NL+QRN + P + + LPFI++ + + C ++S
Sbjct: 234 KRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISS 293
>sp|Q9FNY3|DPA_ARATH Transcription factor-like protein DPA OS=Arabidopsis thaliana
GN=DPA PE=1 SV=1
Length = 292
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 122/172 (70%), Gaps = 7/172 (4%)
Query: 79 VGGKKKKRGQRAGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLA 138
+G +KK + + +GGG LRQFS+ VC+K+E+K TTY EVADE++++FA +
Sbjct: 39 IGSEKKGQSRTSGGG------LRQFSVMVCQKLEAKKITTYKEVADEIISDFATIKQNAE 92
Query: 139 TP-DQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGL 197
P ++ +Y+EKNIRRRVYDALNV MA+DII++DKKEI+WKGLP T D+EE+K +R +
Sbjct: 93 KPLNENEYNEKNIRRRVYDALNVFMALDIIARDKKEIRWKGLPITCKKDVEEVKMDRNKV 152
Query: 198 RNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSSGNAPSGGVALPFILVQVD 249
+ ++KK A+L+EL ++ L++L+ RN+ + P+ G LPFIL++ +
Sbjct: 153 MSSVQKKAAFLKELREKVSSLESLMSRNQEMVVKTQGPAEGFTLPFILLETN 204
>sp|Q24318|TFDP_DROME Transcription factor Dp OS=Drosophila melanogaster GN=Dp PE=1 SV=2
Length = 445
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 88 QRAGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYDE 147
QR DK+G+GLR FSMKVCEKVE KG+TTYNEVAD+LV+E + N+ D+
Sbjct: 158 QRKRKPDKAGKGLRHFSMKVCEKVEEKGKTTYNEVADDLVSE--EMKNNAY---DNNCDQ 212
Query: 148 KNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAY 207
KNIRRRVYDALNVLMA+++ISKDKKEI+W GLP S L+ E R RI++K
Sbjct: 213 KNIRRRVYDALNVLMAINVISKDKKEIRWIGLPANSTETFLALEEENCQRRERIKQKNEM 272
Query: 208 LQELEDQFVGLQNLIQRNERLYSSGNAPS--GGVALPFILVQVDIRQLFSC 256
L+E+ Q V + L++RN+R S G PS + LPFI+V +C
Sbjct: 273 LREMIMQHVAFKGLVERNKRNESQGVVPSPNASIQLPFIIVNTHKSTKINC 323
>sp|Q5H9I0|TFDP3_HUMAN Transcription factor Dp family member 3 OS=Homo sapiens GN=TFDP3
PE=1 SV=1
Length = 405
Score = 137 bits (346), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 87 GQRAGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYD 146
GQ G+K+G GL + SMKV E V+ KG T+ EV ELVA+F SN A+P++ YD
Sbjct: 98 GQHNRKGEKNGMGLCRLSMKVWETVQRKGTTSCQEVVGELVAKFRAASNH-ASPNESAYD 156
Query: 147 EKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTA 206
KNI+RR YDALNVLMAM+IIS++KK+I+W GL S + + L+ ER RI++K +
Sbjct: 157 VKNIKRRTYDALNVLMAMNIISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQS 216
Query: 207 YLQELEDQFVGLQNLIQRN---ERLYSSGNAPSGGVALPFILVQVDIRQLFSC 256
LQ+L Q + +NL+ RN E S P+ + +PFI++ + + +C
Sbjct: 217 ELQQLILQQIAFKNLVLRNQYVEEQVSQRPLPNSVIHVPFIIISSSKKTVINC 269
>sp|Q22703|TFDP1_CAEEL Transcription factor dpl-1 OS=Caenorhabditis elegans GN=dpl-1 PE=1
SV=2
Length = 598
Score = 137 bits (346), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 104/166 (62%), Gaps = 5/166 (3%)
Query: 99 GLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPD--QQQYDEKNIRRRVYD 156
GLR FS KVCEKV+ KG T YNEVADELVA++ +N + D +Q+YD KNIRRRVYD
Sbjct: 72 GLRHFSTKVCEKVKEKGLTNYNEVADELVADYFQ-NNLIKQIDVVKQEYDMKNIRRRVYD 130
Query: 157 ALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFV 216
ALNVL+AM+II+K KK+I+W GLP ++ +I L+ E+ I K L+E+ Q V
Sbjct: 131 ALNVLLAMNIITKSKKDIRWIGLPASASQEISRLEEEKSRREASISSKKQALEEMVLQIV 190
Query: 217 GLQNLIQRNERLYSSGNAPSGG--VALPFILVQVDIRQLFSCIMAS 260
+NL++RN + P + LPF+++ D C ++S
Sbjct: 191 SYKNLVERNRKNEHKNGRPENDTVLHLPFLIINTDKEANVECSVSS 236
>sp|Q64163|TFDP2_MOUSE Transcription factor Dp-2 OS=Mus musculus GN=Tfdp2 PE=1 SV=2
Length = 446
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 135/240 (56%), Gaps = 28/240 (11%)
Query: 35 QSVSTSGSV--GSPSQSMATPASDSTFLRLNHLDIHGDDAGSQGAVVGGKKKKR------ 86
Q ++ SGSV G+P TPA + H+ A + G V +K+ R
Sbjct: 68 QRIANSGSVLIGNP----YTPAP--AMVTQTHI------AEAAGWVPSDRKRAREFIDSD 115
Query: 87 ---GQRAGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQ 143
+R+ GDK+G+GLR FSMKVCEKV+ KG T+YNEVADELV+EF + +N LA
Sbjct: 116 FSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAA--DS 173
Query: 144 QYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEK 203
YD++NIRRRVYDALNVLMAM+IIS + + S + + L+ E+ RI++
Sbjct: 174 AYDQENIRRRVYDALNVLMAMNIISSLPTGKKRNQVDCNSAQECQNLEIEKQRRIERIKQ 233
Query: 204 KTAYLQELEDQFVGLQNLIQRNERLYSSGNAP---SGGVALPFILVQVDIRQLFSCIMAS 260
K A LQEL Q + +NL+QRN + P + + LPFI++ + + C ++S
Sbjct: 234 KRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPAVNSTIQLPFIIINTSRKTVIDCSISS 293
>sp|Q96AV8|E2F7_HUMAN Transcription factor E2F7 OS=Homo sapiens GN=E2F7 PE=1 SV=3
Length = 911
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 10/66 (15%)
Query: 151 RRRVYDALNVLMAMDIISK-DKKEIQWKG---LPRTSLNDIEELKAERLGLRNRIEKKTA 206
RRR+YD +NVL ++ ++S+ K + W G LP+T N +RLG + E++ A
Sbjct: 183 RRRIYDIVNVLESLHLVSRVAKNQYGWHGRHSLPKTLRN------LQRLGEEQKYEEQMA 236
Query: 207 YLQELE 212
YLQ+ E
Sbjct: 237 YLQQKE 242
>sp|E1BE02|E2F7_BOVIN Transcription factor E2F7 OS=Bos taurus GN=E2F7 PE=3 SV=1
Length = 911
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 10/66 (15%)
Query: 151 RRRVYDALNVLMAMDIISK-DKKEIQWKG---LPRTSLNDIEELKAERLGLRNRIEKKTA 206
RRR+YD +NVL ++ ++S+ K + W G LP+T N +RLG + + E++ A
Sbjct: 182 RRRIYDIVNVLESLHLVSRVAKNQYSWHGRHSLPKTLRN------LQRLGEKQKYEEQMA 235
Query: 207 YLQELE 212
+LQ+ E
Sbjct: 236 HLQQKE 241
>sp|Q6S7F2|E2F7_MOUSE Transcription factor E2F7 OS=Mus musculus GN=E2f7 PE=1 SV=1
Length = 904
Score = 38.5 bits (88), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
Query: 151 RRRVYDALNVLMAMDIISK-DKKEIQWKG---LPRTSLNDIEELKAERLGLRNRIEKKTA 206
RRR+YD +NVL ++ ++S+ K + W G LP+T L + +RLG + E++ A
Sbjct: 184 RRRIYDIVNVLESLHLVSRVAKNQYGWHGRHSLPKT-LRTL-----QRLGEEQKYEEQMA 237
Query: 207 YLQELEDQFVG 217
LQ+ E +G
Sbjct: 238 CLQQKELDLMG 248
>sp|Q15329|E2F5_HUMAN Transcription factor E2F5 OS=Homo sapiens GN=E2F5 PE=1 SV=1
Length = 346
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 151 RRRVYDALNVLMAMDIIS-KDKKEIQWKGL-----PRTSLNDIEELKA--ERLGLRNR-I 201
+RR+YD NVL +D+I K K IQWKG+ + ++ + LKA E L L+ R +
Sbjct: 88 KRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKEREL 147
Query: 202 EKKTAYLQE 210
+++ +LQ+
Sbjct: 148 DQQKLWLQQ 156
>sp|Q61502|E2F5_MOUSE Transcription factor E2F5 OS=Mus musculus GN=E2f5 PE=2 SV=2
Length = 335
Score = 38.1 bits (87), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 151 RRRVYDALNVLMAMDIIS-KDKKEIQWKGL-----PRTSLNDIEELKA--ERLGLRNR-I 201
+RR+YD NVL +D+I K K IQWKG+ + ++ + LKA E L L+ R +
Sbjct: 78 KRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRCLKAEIEDLELKEREL 137
Query: 202 EKKTAYLQE 210
+++ +LQ+
Sbjct: 138 DQQKLWLQQ 146
>sp|E1BKK0|E2F8_BOVIN Transcription factor E2F8 OS=Bos taurus GN=E2F8 PE=3 SV=2
Length = 866
Score = 37.7 bits (86), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 13/76 (17%)
Query: 146 DEKNI-RRRVYDALNVLMAMDIISK-DKKEIQWKGLPRTSLNDI-EELKAERLGLRNR-- 200
+E N+ RRR+YD +NVL ++ ++S+ K W G R +LN I E LK+ +G N+
Sbjct: 148 EELNVERRRIYDIVNVLESLHMVSRLAKNRYTWHG--RHNLNQILETLKS--VGEENKYA 203
Query: 201 ----IEKKTAYLQELE 212
+ KK Y QE E
Sbjct: 204 EQIMMIKKKEYEQEFE 219
>sp|Q8RWL0|E2FF_ARATH E2F transcription factor-like E2FF OS=Arabidopsis thaliana GN=E2FF
PE=2 SV=1
Length = 354
Score = 37.7 bits (86), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 10/55 (18%)
Query: 151 RRRVYDALNVLMAMDIISKD-KKEIQWKG---LPRTSLNDIEELKAERLGLRNRI 201
RRR+YD +N+L ++ I+++ K + WKG +PR+ ++ELK E G+R R+
Sbjct: 58 RRRIYDVVNILESIGIVARRGKNQYSWKGFGEIPRS----LDELKEE--GMRERL 106
>sp|Q62814|E2F5_RAT Transcription factor E2F5 (Fragment) OS=Rattus norvegicus GN=E2f5
PE=2 SV=1
Length = 300
Score = 37.4 bits (85), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 151 RRRVYDALNVLMAMDIIS-KDKKEIQWKGL-----PRTSLNDIEELKA--ERLGLRNR-I 201
+RR+YD NVL +D+I K K IQWKG+ + ++ + LKA E L L+ R +
Sbjct: 43 KRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRCLKAEIEDLELKEREL 102
Query: 202 EKKTAYLQE 210
+++ +LQ+
Sbjct: 103 DQQKLWLQQ 111
>sp|D4A4D7|E2F7_RAT Transcription factor E2F7 OS=Rattus norvegicus GN=E2f7 PE=3 SV=1
Length = 902
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 10/66 (15%)
Query: 151 RRRVYDALNVLMAMDIISK-DKKEIQWKG---LPRTSLNDIEELKAERLGLRNRIEKKTA 206
RRR+YD +NVL ++ ++S+ K + W G LP+T L + +RLG + E++ A
Sbjct: 184 RRRIYDIVNVLESLHLVSRVAKNQYGWHGRHSLPKT-LRTL-----QRLGEEQKYEEQMA 237
Query: 207 YLQELE 212
LQ+ E
Sbjct: 238 CLQQKE 243
>sp|A1JK14|GSH1_YERE8 Glutamate--cysteine ligase OS=Yersinia enterocolitica serotype O:8
/ biotype 1B (strain 8081) GN=gshA PE=3 SV=1
Length = 519
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 84 KKRGQRAGGG--------DKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSN 135
+K GQ G G +K G+ L +V E ++ K T Y +V DELVA F DPS
Sbjct: 385 RKPGQTIGMGCNDTREPLEKVGKDLFTDLRRVAEVLDGKDSTEYQQVCDELVASFDDPSL 444
Query: 136 SLATPDQQQYDEKNI 150
+ + Q E I
Sbjct: 445 TFSARILQAMKEGGI 459
>sp|Q16254|E2F4_HUMAN Transcription factor E2F4 OS=Homo sapiens GN=E2F4 PE=1 SV=2
Length = 413
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 151 RRRVYDALNVLMAMDIIS-KDKKEIQWKGL-PRTSLNDIEELKAERLGLRNRIEKKTAYL 208
+RR+YD NVL + +I K K IQWKG+ P + +I + + + L+ IE+
Sbjct: 55 KRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIAD---KLIELKAEIEELQQRE 111
Query: 209 QELEDQFVGLQNLIQ 223
QEL+ V +Q I+
Sbjct: 112 QELDQHKVWVQQSIR 126
>sp|Q01094|E2F1_HUMAN Transcription factor E2F1 OS=Homo sapiens GN=E2F1 PE=1 SV=1
Length = 437
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 16/84 (19%)
Query: 151 RRRVYDALNVLMAMDIIS-KDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTA--- 206
+RR+YD NVL + +I+ K K IQW G T +G+ R+E T
Sbjct: 164 KRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTT------------VGVGGRLEGLTQDLR 211
Query: 207 YLQELEDQFVGLQNLIQRNERLYS 230
LQE E Q L N+ RL S
Sbjct: 212 QLQESEQQLDHLMNICTTQLRLLS 235
>sp|Q8R0K9|E2F4_MOUSE Transcription factor E2F4 OS=Mus musculus GN=E2f4 PE=2 SV=1
Length = 410
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 151 RRRVYDALNVLMAMDIIS-KDKKEIQWKGL-PRTSLNDIEELKAERLGLRNRIEKKTAYL 208
+RR+YD NVL + +I K K IQWKG+ P + +I + + + L+ IE+
Sbjct: 55 KRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIAD---KLIELKAEIEELQQRE 111
Query: 209 QELEDQFVGLQNLIQ 223
QEL+ V +Q I+
Sbjct: 112 QELDQHKVWVQQSIR 126
>sp|Q9FNY0|E2FA_ARATH Transcription factor E2FA OS=Arabidopsis thaliana GN=E2FA PE=1 SV=1
Length = 485
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 13/76 (17%)
Query: 151 RRRVYDALNVLMAMDIISKD-KKEIQWKGLPRTSLN------------DIEELKAERLGL 197
+RR+YD NVL +D+I K K I WKG+ + +IE L E L
Sbjct: 204 KRRIYDITNVLEGIDLIEKPFKNRILWKGVDACPGDEDADVSVLQLQAEIENLALEEQAL 263
Query: 198 RNRIEKKTAYLQELED 213
N+I + L++L +
Sbjct: 264 DNQIRQTEERLRDLSE 279
>sp|Q9LFQ9|E2FD_ARATH E2F transcription factor-like E2FD OS=Arabidopsis thaliana GN=E2FD
PE=1 SV=1
Length = 359
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 151 RRRVYDALNVLMAMDIISKD-KKEIQWKGL---PRTSLNDIEELKAERLGLRNRIEKK-- 204
RRR+YD +N+L ++ ++++ K + WKG PR EE E+ + + K
Sbjct: 50 RRRIYDVVNILESIGLVARSGKNQYSWKGFGAVPRALSELKEEGMKEKFAIVPFVAKSEM 109
Query: 205 TAYLQELEDQFVGLQNLIQRNERLYSSGNAPSGGVALPFILVQVDIRQLFSCIMASIIT 263
Y +E E+ F ++ +++ +S P L+ + +LF C ++T
Sbjct: 110 VVYEKEGEESF-----MLSPDDQEFSPSPRPDNRKERTLWLLAQNFVKLFLCSDDDLVT 163
>sp|Q9FV71|E2FB_ARATH Transcription factor E2FB OS=Arabidopsis thaliana GN=E2FB PE=1 SV=1
Length = 469
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 151 RRRVYDALNVLMAMDIISKD-KKEIQWKGL----PRTSLNDIEELKAE 193
+RR+YD NVL + +I K K IQWKGL P ++ I L+ E
Sbjct: 166 KRRIYDITNVLEGIGLIEKTLKNRIQWKGLDVSKPGETIESIANLQDE 213
>sp|Q9FV70|E2FC_ARATH Transcription factor E2FC OS=Arabidopsis thaliana GN=E2FC PE=1 SV=1
Length = 396
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 24/149 (16%)
Query: 80 GGKKKKRGQRAGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPS---NS 136
G K K G+R G+ GL S+ C S G T V +L+ E D + N
Sbjct: 127 GTKLLKAGKRMANGEVQNGGLNGASIN-CRYDSSLGLLTKKFV--KLIQEAEDGTLDLNY 183
Query: 137 LATPDQQQYDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG---LPRTSLND------ 186
A + Q +RR+YD NVL + +I K K I+WKG L + L D
Sbjct: 184 CAVVLEVQ------KRRIYDITNVLEGIGLIEKTTKNHIRWKGADNLGQKDLGDQISRLK 237
Query: 187 --IEELKAERLGLRNRIEKKTAYLQELED 213
+E +++E L + I ++ L+ LE+
Sbjct: 238 SEVESMQSEESRLDDLIRERQEALRSLEE 266
>sp|Q4FM20|SYV_PELUB Valine--tRNA ligase OS=Pelagibacter ubique (strain HTCC1062)
GN=valS PE=3 SV=1
Length = 875
Score = 33.1 bits (74), Expect = 2.2, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 90 AGGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYDEKN 149
A G DK+ G +F KV E E G N++ + D S + T D+ N
Sbjct: 95 ADGIDKNEIGREKFIEKVWEWKEEHGDIILNQLKK--LGCSCDWSRNAFTMDE------N 146
Query: 150 IRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIE 188
+ + V L +I KDKK + W + +T+++D+E
Sbjct: 147 LSKSVLKVFVELHKKGLIYKDKKLVNWDTVLKTAISDLE 185
>sp|F1QZ88|E2F8_DANRE Transcription factor E2F8 OS=Danio rerio GN=e2f8 PE=2 SV=1
Length = 917
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 151 RRRVYDALNVLMAMDIISK-DKKEIQWKGLPRTSL-NDIEELKAERLGLRNRIEKKTAYL 208
RRR+YD +NVL +++++S+ K W G R L + LK R G NR E+ +
Sbjct: 167 RRRIYDIMNVLESLNMVSRLAKNRYTWHG--RVKLAQTLAVLK--RAGKENRYEQLMQQI 222
Query: 209 ----QELEDQFVGLQNLIQRNERLYS 230
QE E++ L + NE + S
Sbjct: 223 RQRSQEREEREFDLDGEEKENEEMSS 248
>sp|Q61501|E2F1_MOUSE Transcription factor E2F1 OS=Mus musculus GN=E2f1 PE=1 SV=1
Length = 430
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 151 RRRVYDALNVLMAMDIIS-KDKKEIQWKG 178
+RR+YD NVL + +I+ K K IQW G
Sbjct: 159 KRRIYDITNVLEGIQLIAKKSKNHIQWLG 187
>sp|Q90977|E2F1_CHICK Transcription factor E2F1 OS=Gallus gallus GN=E2F1 PE=2 SV=1
Length = 403
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 151 RRRVYDALNVLMAMDIIS-KDKKEIQWKG 178
+RR+YD NVL + +I+ K K IQW G
Sbjct: 141 KRRIYDITNVLEGIQLITKKSKNNIQWLG 169
>sp|Q27368|E2F_DROME Transcription factor E2f OS=Drosophila melanogaster GN=E2f PE=1
SV=2
Length = 805
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 151 RRRVYDALNVLMAMDIIS-KDKKEIQWK 177
+RR+YD NVL ++I+ K K IQW+
Sbjct: 291 KRRIYDITNVLEGINILEKKSKNNIQWR 318
>sp|F7EA39|E2F8_XENTR Transcription factor E2F8 OS=Xenopus tropicalis GN=e2f8 PE=3 SV=1
Length = 736
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 151 RRRVYDALNVLMAMDIISK-DKKEIQWKGLPRTSLND-IEELKAERLGLRNRIEKKTAYL 208
RRR+YD +NVL ++ ++S+ K + W G R +L+ + LK ++G NR ++ L
Sbjct: 139 RRRIYDIVNVLESLHMVSRLAKNKYIWHG--RLNLSKTFDALK--KVGEENRYGEQIQLL 194
Query: 209 QELEDQFVGLQN 220
++ E + QN
Sbjct: 195 RKREQEECDSQN 206
>sp|O35261|E2F3_MOUSE Transcription factor E2F3 OS=Mus musculus GN=E2f3 PE=1 SV=2
Length = 457
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 151 RRRVYDALNVLMAMDII-SKDKKEIQWKG 178
+RR+YD NVL + +I K K +QW G
Sbjct: 207 KRRIYDITNVLEGIHLIKKKSKNNVQWMG 235
>sp|O00716|E2F3_HUMAN Transcription factor E2F3 OS=Homo sapiens GN=E2F3 PE=1 SV=1
Length = 465
Score = 31.2 bits (69), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 151 RRRVYDALNVLMAMDII-SKDKKEIQWKG 178
+RR+YD NVL + +I K K +QW G
Sbjct: 215 KRRIYDITNVLEGIHLIKKKSKNNVQWMG 243
>sp|E7KEZ1|SPC42_YEASA Spindle pole body component SPC42 OS=Saccharomyces cerevisiae
(strain AWRI796) GN=SPC42 PE=3 SV=1
Length = 363
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 172 KEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSS 231
KE+ +K R N+I ELK LR+++EK ++LEDQ + LQ I E+ S
Sbjct: 70 KELNFKL--REKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSD 127
Query: 232 GNAPSGGVALPFI 244
N+ + P +
Sbjct: 128 ANSTFKEMRFPKV 140
>sp|C8ZCC8|SPC42_YEAS8 Spindle pole body component SPC42 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=SPC42 PE=3
SV=1
Length = 363
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 172 KEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSS 231
KE+ +K R N+I ELK LR+++EK ++LEDQ + LQ I E+ S
Sbjct: 70 KELNFKL--REKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSD 127
Query: 232 GNAPSGGVALPFI 244
N+ + P +
Sbjct: 128 ANSTFKEMRFPKV 140
>sp|A6ZZS3|SPC42_YEAS7 Spindle pole body component SPC42 OS=Saccharomyces cerevisiae
(strain YJM789) GN=SPC42 PE=3 SV=1
Length = 363
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 172 KEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSS 231
KE+ +K R N+I ELK LR+++EK ++LEDQ + LQ I E+ S
Sbjct: 70 KELNFKL--REKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSD 127
Query: 232 GNAPSGGVALPFI 244
N+ + P +
Sbjct: 128 ANSTFKEMRFPKV 140
>sp|C7GP31|SPC42_YEAS2 Spindle pole body component SPC42 OS=Saccharomyces cerevisiae
(strain JAY291) GN=SPC42 PE=3 SV=1
Length = 363
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 172 KEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSS 231
KE+ +K R N+I ELK LR+++EK ++LEDQ + LQ I E+ S
Sbjct: 70 KELNFKL--REKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSD 127
Query: 232 GNAPSGGVALPFI 244
N+ + P +
Sbjct: 128 ANSTFKEMRFPKV 140
>sp|B3LR46|SPC42_YEAS1 Spindle pole body component SPC42 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SPC42 PE=3 SV=1
Length = 363
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 172 KEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSS 231
KE+ +K R N+I ELK LR+++EK ++LEDQ + LQ I E+ S
Sbjct: 70 KELNFKL--REKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSD 127
Query: 232 GNAPSGGVALPFI 244
N+ + P +
Sbjct: 128 ANSTFKEMRFPKV 140
>sp|P36094|SPC42_YEAST Spindle pole body component SPC42 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPC42 PE=1 SV=1
Length = 363
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 172 KEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSS 231
KE+ +K R N+I ELK LR+++EK ++LEDQ + LQ I E+ S
Sbjct: 70 KELNFKL--REKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSD 127
Query: 232 GNAPSGGVALPFI 244
N+ + P +
Sbjct: 128 ANSTFKEMRFPKV 140
>sp|A2BXQ6|SYS_PROM5 Serine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9515)
GN=serS PE=3 SV=1
Length = 425
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 182 TSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSSGNAPSGGVAL 241
+S ++ + +A R +R +I+KKT+Y+ L + + + + +G P G V +
Sbjct: 353 SSCSNCRDFQARRSSIRTKIDKKTSYIHTLNGSGLAIGRTMA---AILENGQRPDGSVKI 409
Query: 242 PFILV 246
P +LV
Sbjct: 410 PDVLV 414
>sp|Q08DY6|E2F6_BOVIN Transcription factor E2F6 OS=Bos taurus GN=E2F6 PE=2 SV=1
Length = 285
Score = 30.8 bits (68), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 151 RRRVYDALNVLMAMDIIS-KDKKEIQWKG 178
+RRVYD NVL +D++ K K I+W G
Sbjct: 100 KRRVYDITNVLDGIDLVEKKSKNHIRWIG 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,699,833
Number of Sequences: 539616
Number of extensions: 4355699
Number of successful extensions: 12681
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 12574
Number of HSP's gapped (non-prelim): 173
length of query: 263
length of database: 191,569,459
effective HSP length: 115
effective length of query: 148
effective length of database: 129,513,619
effective search space: 19168015612
effective search space used: 19168015612
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)