Query 024766
Match_columns 263
No_of_seqs 257 out of 1924
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 07:14:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024766.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024766hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02166 dTDP-glucose 4,6-dehy 100.0 8.7E-48 1.9E-52 360.8 23.9 262 2-263 3-267 (436)
2 PLN02206 UDP-glucuronate decar 100.0 6.8E-46 1.5E-50 348.6 23.3 257 6-263 2-266 (442)
3 KOG1429 dTDP-glucose 4-6-dehyd 99.9 7.2E-28 1.5E-32 207.9 8.4 150 114-263 25-174 (350)
4 COG1087 GalE UDP-glucose 4-epi 99.9 1E-24 2.2E-29 190.5 12.9 138 117-263 1-146 (329)
5 PRK15181 Vi polysaccharide bio 99.9 2.2E-22 4.8E-27 183.8 14.4 148 111-263 10-169 (348)
6 COG1088 RfbB dTDP-D-glucose 4, 99.9 4.9E-21 1.1E-25 166.9 12.5 142 117-263 1-156 (340)
7 TIGR01472 gmd GDP-mannose 4,6- 99.9 5.8E-21 1.3E-25 173.8 13.7 142 117-263 1-160 (343)
8 PRK09987 dTDP-4-dehydrorhamnos 99.8 7.8E-21 1.7E-25 170.2 12.3 125 117-263 1-132 (299)
9 PLN02214 cinnamoyl-CoA reducta 99.8 2.1E-20 4.6E-25 170.5 14.7 145 114-263 8-165 (342)
10 KOG1371 UDP-glucose 4-epimeras 99.8 9.8E-21 2.1E-25 167.0 11.4 143 116-263 2-157 (343)
11 PLN02427 UDP-apiose/xylose syn 99.8 2.6E-20 5.6E-25 172.3 14.7 133 113-245 11-151 (386)
12 PLN02653 GDP-mannose 4,6-dehyd 99.8 1.9E-20 4.1E-25 170.1 13.2 145 113-263 3-166 (340)
13 TIGR02622 CDP_4_6_dhtase CDP-g 99.8 5.1E-20 1.1E-24 168.1 15.2 145 114-263 2-156 (349)
14 PRK11908 NAD-dependent epimera 99.8 3.8E-20 8.3E-25 168.7 14.0 144 116-263 1-153 (347)
15 PRK08125 bifunctional UDP-gluc 99.8 7.2E-20 1.6E-24 180.4 15.0 148 112-263 311-467 (660)
16 PF01073 3Beta_HSD: 3-beta hyd 99.8 6.5E-20 1.4E-24 163.1 12.7 138 120-263 1-150 (280)
17 PLN02240 UDP-glucose 4-epimera 99.8 1.1E-19 2.3E-24 165.5 13.9 145 114-263 3-160 (352)
18 PLN02572 UDP-sulfoquinovose sy 99.8 2.4E-19 5.3E-24 168.9 15.3 152 111-263 42-232 (442)
19 PLN02896 cinnamyl-alcohol dehy 99.8 3E-19 6.5E-24 163.3 14.0 149 115-263 9-180 (353)
20 COG1086 Predicted nucleoside-d 99.8 1.3E-19 2.8E-24 170.2 11.4 137 96-232 223-378 (588)
21 PLN02989 cinnamyl-alcohol dehy 99.8 4.5E-19 9.8E-24 159.9 14.6 148 115-263 4-168 (325)
22 PLN00198 anthocyanidin reducta 99.8 5.7E-19 1.2E-23 160.3 15.0 148 114-263 7-172 (338)
23 PRK10675 UDP-galactose-4-epime 99.8 9.8E-19 2.1E-23 158.3 14.3 142 117-263 1-153 (338)
24 PRK10217 dTDP-glucose 4,6-dehy 99.8 8.7E-19 1.9E-23 159.9 13.8 143 116-263 1-164 (355)
25 PLN02650 dihydroflavonol-4-red 99.8 1E-18 2.2E-23 159.6 14.2 147 115-263 4-167 (351)
26 COG4221 Short-chain alcohol de 99.8 9.4E-19 2E-23 149.6 12.8 118 114-232 4-142 (246)
27 PLN02986 cinnamyl-alcohol dehy 99.8 1.4E-18 2.9E-23 156.7 14.4 147 115-263 4-167 (322)
28 PLN02662 cinnamyl-alcohol dehy 99.8 1.7E-18 3.7E-23 155.6 13.6 146 115-263 3-166 (322)
29 KOG1502 Flavonol reductase/cin 99.8 1.9E-18 4.2E-23 154.2 13.5 135 115-250 5-154 (327)
30 COG1091 RfbD dTDP-4-dehydrorha 99.8 1.9E-18 4E-23 152.0 12.0 125 118-263 2-128 (281)
31 PLN02695 GDP-D-mannose-3',5'-e 99.8 3.5E-18 7.6E-23 157.5 13.3 141 115-263 20-171 (370)
32 PLN02260 probable rhamnose bio 99.8 4.6E-18 9.9E-23 167.8 15.0 146 113-263 3-163 (668)
33 PRK10084 dTDP-glucose 4,6 dehy 99.8 4E-18 8.7E-23 155.4 13.2 142 117-263 1-171 (352)
34 PLN02778 3,5-epimerase/4-reduc 99.8 6.2E-18 1.3E-22 151.6 14.1 128 116-263 9-145 (298)
35 PF02719 Polysacc_synt_2: Poly 99.8 5.9E-19 1.3E-23 156.0 7.1 117 119-235 1-133 (293)
36 PF04321 RmlD_sub_bind: RmlD s 99.8 3.7E-19 8.1E-24 158.6 5.8 122 117-263 1-129 (286)
37 PF01370 Epimerase: NAD depend 99.8 1.9E-18 4.1E-23 148.0 9.9 136 119-263 1-144 (236)
38 TIGR03589 PseB UDP-N-acetylglu 99.8 6E-18 1.3E-22 153.3 13.3 118 114-232 2-127 (324)
39 COG0300 DltE Short-chain dehyd 99.8 5E-18 1.1E-22 148.4 11.9 135 113-263 3-160 (265)
40 COG0451 WcaG Nucleoside-diphos 99.8 4.5E-18 9.8E-23 151.6 12.0 136 118-263 2-146 (314)
41 TIGR01214 rmlD dTDP-4-dehydror 99.8 3E-18 6.6E-23 151.6 10.2 121 118-263 1-128 (287)
42 TIGR01181 dTDP_gluc_dehyt dTDP 99.8 8.7E-18 1.9E-22 149.8 13.1 141 118-263 1-154 (317)
43 PRK11150 rfaD ADP-L-glycero-D- 99.8 3.8E-18 8.2E-23 152.8 10.4 132 119-263 2-144 (308)
44 COG1089 Gmd GDP-D-mannose dehy 99.8 2.5E-18 5.5E-23 149.1 8.6 144 115-263 1-159 (345)
45 TIGR01179 galE UDP-glucose-4-e 99.8 1.1E-17 2.4E-22 149.7 12.9 141 118-263 1-149 (328)
46 PRK05854 short chain dehydroge 99.7 3.3E-17 7.1E-22 147.7 13.4 146 113-263 11-179 (313)
47 PLN02996 fatty acyl-CoA reduct 99.7 4.2E-17 9.1E-22 155.6 14.3 127 109-238 4-169 (491)
48 KOG1205 Predicted dehydrogenas 99.7 2.3E-17 5E-22 145.3 11.2 123 112-235 8-155 (282)
49 TIGR03466 HpnA hopanoid-associ 99.7 6.4E-17 1.4E-21 145.2 13.5 138 117-263 1-145 (328)
50 PRK06197 short chain dehydroge 99.7 4.3E-17 9.3E-22 146.1 11.9 148 113-263 13-182 (306)
51 PLN02686 cinnamoyl-CoA reducta 99.7 4.6E-17 1E-21 150.0 12.2 151 112-263 49-220 (367)
52 PLN02583 cinnamoyl-CoA reducta 99.7 6.9E-17 1.5E-21 144.5 12.8 147 115-263 5-167 (297)
53 PRK05717 oxidoreductase; Valid 99.7 8.8E-17 1.9E-21 140.1 12.8 123 110-234 4-148 (255)
54 PRK06194 hypothetical protein; 99.7 7.9E-17 1.7E-21 142.6 12.3 122 114-235 4-153 (287)
55 PLN02725 GDP-4-keto-6-deoxyman 99.7 2.7E-17 5.9E-22 146.5 9.0 124 120-263 1-134 (306)
56 PRK07453 protochlorophyllide o 99.7 1.4E-16 2.9E-21 144.0 13.6 122 114-235 4-150 (322)
57 KOG1201 Hydroxysteroid 17-beta 99.7 2.7E-16 5.8E-21 138.0 14.8 131 110-240 32-184 (300)
58 TIGR02197 heptose_epim ADP-L-g 99.7 7.6E-17 1.7E-21 144.1 11.5 132 119-263 1-142 (314)
59 KOG1430 C-3 sterol dehydrogena 99.7 1.6E-16 3.4E-21 144.4 12.5 144 115-263 3-157 (361)
60 PF07993 NAD_binding_4: Male s 99.7 2.1E-17 4.6E-22 144.3 6.4 139 121-263 1-172 (249)
61 PRK05876 short chain dehydroge 99.7 1.9E-16 4.2E-21 140.1 12.7 123 113-235 3-148 (275)
62 TIGR01746 Thioester-redct thio 99.7 2.5E-16 5.5E-21 142.8 13.7 143 118-263 1-169 (367)
63 PRK06196 oxidoreductase; Provi 99.7 2.8E-16 6.1E-21 141.5 13.1 144 113-263 23-185 (315)
64 PRK05866 short chain dehydroge 99.7 4.3E-16 9.3E-21 139.2 13.9 125 111-235 35-183 (293)
65 PRK06398 aldose dehydrogenase; 99.7 5.7E-16 1.2E-20 135.6 14.1 113 113-235 3-136 (258)
66 PRK05872 short chain dehydroge 99.7 4.4E-16 9.5E-21 139.2 13.1 123 113-235 6-148 (296)
67 PRK12481 2-deoxy-D-gluconate 3 99.7 2.6E-16 5.6E-21 137.2 10.6 121 114-235 6-148 (251)
68 PLN02253 xanthoxin dehydrogena 99.7 4.5E-16 9.7E-21 137.4 12.2 123 113-235 15-161 (280)
69 PRK07523 gluconate 5-dehydroge 99.7 5.6E-16 1.2E-20 134.9 12.6 121 114-234 8-150 (255)
70 PRK06482 short chain dehydroge 99.7 5.5E-16 1.2E-20 136.6 12.7 117 116-234 2-139 (276)
71 PRK06128 oxidoreductase; Provi 99.7 4.9E-16 1.1E-20 139.0 12.5 123 113-235 52-197 (300)
72 PRK08339 short chain dehydroge 99.7 6.7E-16 1.5E-20 135.7 13.0 122 113-234 5-148 (263)
73 PRK07024 short chain dehydroge 99.7 5.2E-16 1.1E-20 135.5 12.0 119 116-234 2-142 (257)
74 PRK07063 short chain dehydroge 99.7 4.7E-16 1E-20 135.8 11.7 122 114-235 5-150 (260)
75 PRK07774 short chain dehydroge 99.7 4.6E-16 9.9E-21 134.7 11.3 122 114-235 4-150 (250)
76 PRK07231 fabG 3-ketoacyl-(acyl 99.7 6.2E-16 1.3E-20 133.7 12.0 122 114-235 3-146 (251)
77 PRK08589 short chain dehydroge 99.7 6.9E-16 1.5E-20 136.1 12.5 121 114-235 4-146 (272)
78 PRK07890 short chain dehydroge 99.7 6.4E-16 1.4E-20 134.4 11.9 121 114-234 3-145 (258)
79 PRK07478 short chain dehydroge 99.7 9.6E-16 2.1E-20 133.4 12.7 121 114-234 4-147 (254)
80 PRK06180 short chain dehydroge 99.7 1E-15 2.3E-20 135.2 13.0 119 115-235 3-142 (277)
81 PRK06179 short chain dehydroge 99.7 1.1E-15 2.5E-20 134.1 12.9 114 115-235 3-137 (270)
82 COG3320 Putative dehydrogenase 99.7 6.4E-16 1.4E-20 139.5 11.4 144 117-263 1-172 (382)
83 PRK07201 short chain dehydroge 99.7 9.9E-16 2.1E-20 150.6 13.8 141 117-263 1-155 (657)
84 PLN02503 fatty acyl-CoA reduct 99.7 1.4E-15 3.1E-20 147.3 14.3 137 108-248 111-285 (605)
85 PRK07814 short chain dehydroge 99.7 1.1E-15 2.4E-20 133.9 12.2 120 114-233 8-150 (263)
86 PRK08265 short chain dehydroge 99.7 2.1E-15 4.6E-20 132.1 13.8 118 114-233 4-140 (261)
87 PRK05993 short chain dehydroge 99.7 1.1E-15 2.4E-20 135.1 12.1 115 115-234 3-139 (277)
88 PRK08277 D-mannonate oxidoredu 99.6 1.3E-15 2.8E-20 134.3 12.4 123 113-235 7-166 (278)
89 PRK09186 flagellin modificatio 99.6 1.5E-15 3.2E-20 132.0 12.4 144 114-263 2-172 (256)
90 PRK08263 short chain dehydroge 99.6 1.5E-15 3.3E-20 133.9 12.6 119 115-235 2-141 (275)
91 PRK07825 short chain dehydroge 99.6 1.9E-15 4E-20 133.0 13.0 119 114-235 3-142 (273)
92 PRK06463 fabG 3-ketoacyl-(acyl 99.6 1.8E-15 3.8E-20 131.9 12.7 118 114-235 5-143 (255)
93 TIGR01832 kduD 2-deoxy-D-gluco 99.6 1.3E-15 2.7E-20 131.9 11.7 121 114-235 3-145 (248)
94 PRK12746 short chain dehydroge 99.6 1.9E-15 4.2E-20 131.2 12.7 122 114-235 4-152 (254)
95 PRK07856 short chain dehydroge 99.6 3E-15 6.6E-20 130.1 13.5 114 114-234 4-139 (252)
96 PRK06138 short chain dehydroge 99.6 2.4E-15 5.1E-20 130.3 12.8 122 114-235 3-146 (252)
97 PRK13394 3-hydroxybutyrate deh 99.6 2.7E-15 5.9E-20 130.6 13.0 121 114-234 5-148 (262)
98 PRK07067 sorbitol dehydrogenas 99.6 2.3E-15 4.9E-20 131.2 12.4 117 114-232 4-142 (257)
99 PRK06181 short chain dehydroge 99.6 2.6E-15 5.7E-20 131.2 12.8 120 116-235 1-142 (263)
100 PRK06523 short chain dehydroge 99.6 2.6E-15 5.6E-20 131.0 12.7 116 112-235 5-143 (260)
101 PRK06114 short chain dehydroge 99.6 3E-15 6.5E-20 130.4 12.9 122 113-234 5-149 (254)
102 PRK12429 3-hydroxybutyrate deh 99.6 2.4E-15 5.2E-20 130.5 12.3 121 114-234 2-144 (258)
103 PRK06139 short chain dehydroge 99.6 2.2E-15 4.8E-20 137.0 12.5 122 114-235 5-148 (330)
104 PRK07985 oxidoreductase; Provi 99.6 2.4E-15 5.3E-20 134.4 12.5 123 113-235 46-191 (294)
105 PRK08267 short chain dehydroge 99.6 2.8E-15 6.1E-20 130.9 12.5 119 116-235 1-142 (260)
106 PRK06914 short chain dehydroge 99.6 2.7E-15 5.8E-20 132.4 12.4 121 115-235 2-146 (280)
107 PRK12823 benD 1,6-dihydroxycyc 99.6 3.3E-15 7.2E-20 130.3 12.8 121 114-235 6-149 (260)
108 PRK08628 short chain dehydroge 99.6 3E-15 6.5E-20 130.4 12.4 121 113-234 4-144 (258)
109 PRK12935 acetoacetyl-CoA reduc 99.6 3.8E-15 8.3E-20 128.8 12.9 121 114-234 4-147 (247)
110 PRK12745 3-ketoacyl-(acyl-carr 99.6 2.6E-15 5.7E-20 130.4 11.9 119 116-234 2-151 (256)
111 PRK06200 2,3-dihydroxy-2,3-dih 99.6 2.1E-15 4.6E-20 131.9 11.3 120 114-235 4-148 (263)
112 PRK06182 short chain dehydroge 99.6 2.1E-15 4.6E-20 132.8 11.3 114 115-233 2-136 (273)
113 PRK09134 short chain dehydroge 99.6 5.3E-15 1.2E-19 129.1 13.6 122 114-235 7-151 (258)
114 PLN02260 probable rhamnose bio 99.6 3.1E-15 6.6E-20 147.8 13.4 127 114-263 378-516 (668)
115 PRK08643 acetoin reductase; Va 99.6 4.5E-15 9.8E-20 129.1 12.9 118 116-233 2-142 (256)
116 PRK12827 short chain dehydroge 99.6 4.7E-15 1E-19 127.9 12.9 122 114-235 4-152 (249)
117 PRK06172 short chain dehydroge 99.6 3.4E-15 7.4E-20 129.7 12.1 122 114-235 5-149 (253)
118 PRK12825 fabG 3-ketoacyl-(acyl 99.6 4E-15 8.6E-20 127.9 12.4 122 114-235 4-148 (249)
119 PRK07109 short chain dehydroge 99.6 3.4E-15 7.3E-20 135.9 12.5 122 114-235 6-149 (334)
120 PRK12826 3-ketoacyl-(acyl-carr 99.6 2.9E-15 6.3E-20 129.3 11.5 121 114-234 4-146 (251)
121 PRK06500 short chain dehydroge 99.6 3.1E-15 6.7E-20 129.3 11.7 120 114-235 4-143 (249)
122 PRK06113 7-alpha-hydroxysteroi 99.6 4.3E-15 9.3E-20 129.4 12.7 121 114-234 9-150 (255)
123 TIGR03206 benzo_BadH 2-hydroxy 99.6 3.8E-15 8.2E-20 128.8 12.2 122 114-235 1-144 (250)
124 PRK08993 2-deoxy-D-gluconate 3 99.6 3.8E-15 8.3E-20 129.8 12.3 121 113-235 7-150 (253)
125 PRK07806 short chain dehydroge 99.6 1.9E-15 4.1E-20 130.8 10.2 118 114-233 4-138 (248)
126 KOG1208 Dehydrogenases with di 99.6 3.1E-15 6.8E-20 134.6 11.9 123 111-233 30-174 (314)
127 PRK09242 tropinone reductase; 99.6 3.3E-15 7.2E-20 130.2 11.7 123 113-235 6-152 (257)
128 PRK07062 short chain dehydroge 99.6 4.5E-15 9.7E-20 129.9 12.5 123 113-235 5-151 (265)
129 PRK07035 short chain dehydroge 99.6 4.1E-15 8.8E-20 129.1 12.1 122 113-234 5-149 (252)
130 PRK08063 enoyl-(acyl carrier p 99.6 6.6E-15 1.4E-19 127.4 13.4 121 114-234 2-145 (250)
131 PRK05855 short chain dehydroge 99.6 3.3E-15 7.2E-20 144.0 12.7 123 113-235 312-457 (582)
132 TIGR02632 RhaD_aldol-ADH rhamn 99.6 4.5E-15 9.7E-20 146.7 13.6 140 82-235 394-559 (676)
133 PRK08085 gluconate 5-dehydroge 99.6 6E-15 1.3E-19 128.3 12.9 120 114-233 7-148 (254)
134 TIGR03325 BphB_TodD cis-2,3-di 99.6 3.2E-15 6.9E-20 130.9 11.1 119 114-234 3-146 (262)
135 PRK12747 short chain dehydroge 99.6 6.4E-15 1.4E-19 128.0 12.9 122 114-235 2-150 (252)
136 PRK07791 short chain dehydroge 99.6 4.7E-15 1E-19 132.0 12.2 120 114-233 4-160 (286)
137 PRK07792 fabG 3-ketoacyl-(acyl 99.6 4.9E-15 1.1E-19 133.1 12.4 123 112-234 8-159 (306)
138 PRK06171 sorbitol-6-phosphate 99.6 6.4E-15 1.4E-19 129.0 12.8 115 113-235 6-150 (266)
139 PRK06701 short chain dehydroge 99.6 8.6E-15 1.9E-19 130.6 13.8 123 113-235 43-187 (290)
140 TIGR01777 yfcH conserved hypot 99.6 3.5E-15 7.7E-20 131.8 11.1 123 119-246 1-128 (292)
141 PRK08642 fabG 3-ketoacyl-(acyl 99.6 5.5E-15 1.2E-19 128.0 12.0 118 114-232 3-148 (253)
142 PRK08213 gluconate 5-dehydroge 99.6 7.5E-15 1.6E-19 128.1 12.8 122 114-235 10-154 (259)
143 PRK06841 short chain dehydroge 99.6 6.7E-15 1.5E-19 127.9 12.4 119 113-233 12-151 (255)
144 PRK08251 short chain dehydroge 99.6 6.9E-15 1.5E-19 127.3 12.3 120 116-235 2-146 (248)
145 TIGR01289 LPOR light-dependent 99.6 8.8E-15 1.9E-19 132.0 13.5 121 115-235 2-148 (314)
146 PRK12742 oxidoreductase; Provi 99.6 8.6E-15 1.9E-19 125.7 12.7 117 114-233 4-135 (237)
147 PRK08936 glucose-1-dehydrogena 99.6 1E-14 2.2E-19 127.5 13.3 122 113-234 4-149 (261)
148 PRK12937 short chain dehydroge 99.6 8.9E-15 1.9E-19 126.1 12.7 121 114-234 3-144 (245)
149 PLN03209 translocon at the inn 99.6 7.5E-15 1.6E-19 140.5 13.3 120 113-234 77-212 (576)
150 PRK06935 2-deoxy-D-gluconate 3 99.6 8.1E-15 1.8E-19 127.9 12.5 121 113-235 12-155 (258)
151 PRK05867 short chain dehydroge 99.6 5.9E-15 1.3E-19 128.4 11.4 120 114-233 7-149 (253)
152 PRK07454 short chain dehydroge 99.6 5.2E-15 1.1E-19 127.6 11.0 121 115-235 5-147 (241)
153 PRK07775 short chain dehydroge 99.6 1.1E-14 2.4E-19 128.5 13.0 122 114-235 8-151 (274)
154 PRK06079 enoyl-(acyl carrier p 99.6 4.8E-15 1E-19 129.3 10.6 118 114-233 5-147 (252)
155 PRK06124 gluconate 5-dehydroge 99.6 1.1E-14 2.4E-19 126.7 12.9 123 112-234 7-151 (256)
156 PRK05875 short chain dehydroge 99.6 7E-15 1.5E-19 129.4 11.7 122 114-235 5-151 (276)
157 PRK06949 short chain dehydroge 99.6 8E-15 1.7E-19 127.5 11.9 123 113-235 6-158 (258)
158 PRK05650 short chain dehydroge 99.6 9.4E-15 2E-19 128.4 12.5 119 117-235 1-141 (270)
159 PRK09135 pteridine reductase; 99.6 9.7E-15 2.1E-19 125.9 12.1 133 115-263 5-160 (249)
160 PRK07904 short chain dehydroge 99.6 1.2E-14 2.6E-19 127.0 12.8 119 115-233 7-149 (253)
161 PRK07666 fabG 3-ketoacyl-(acyl 99.6 1.5E-14 3.2E-19 124.6 13.1 121 114-234 5-147 (239)
162 PRK09072 short chain dehydroge 99.6 1.1E-14 2.4E-19 127.4 12.6 119 114-232 3-141 (263)
163 PRK12743 oxidoreductase; Provi 99.6 1.1E-14 2.5E-19 126.9 12.5 117 116-232 2-142 (256)
164 PRK08278 short chain dehydroge 99.6 1.2E-14 2.6E-19 128.3 12.8 119 114-232 4-151 (273)
165 PRK07576 short chain dehydroge 99.6 1.2E-14 2.6E-19 127.6 12.7 122 113-234 6-148 (264)
166 PRK08226 short chain dehydroge 99.6 1.6E-14 3.5E-19 126.2 13.2 119 114-233 4-144 (263)
167 TIGR01963 PHB_DH 3-hydroxybuty 99.6 1.3E-14 2.9E-19 125.6 12.6 120 116-235 1-142 (255)
168 PRK07097 gluconate 5-dehydroge 99.6 1.5E-14 3.3E-19 126.7 13.1 123 113-235 7-152 (265)
169 PRK12367 short chain dehydroge 99.6 9.9E-15 2.1E-19 127.4 11.7 103 113-219 11-119 (245)
170 PRK12936 3-ketoacyl-(acyl-carr 99.6 1.2E-14 2.5E-19 125.2 12.0 121 114-236 4-146 (245)
171 PRK10538 malonic semialdehyde 99.6 1.1E-14 2.4E-19 126.4 11.9 116 117-234 1-138 (248)
172 PRK07677 short chain dehydroge 99.6 1.6E-14 3.6E-19 125.5 13.0 119 116-234 1-142 (252)
173 PRK08264 short chain dehydroge 99.6 1.1E-14 2.5E-19 125.2 11.9 116 114-235 4-138 (238)
174 PRK07326 short chain dehydroge 99.6 1.1E-14 2.5E-19 124.9 11.7 122 114-235 4-145 (237)
175 PRK06101 short chain dehydroge 99.6 1.1E-14 2.4E-19 126.0 11.6 114 116-232 1-130 (240)
176 PRK07102 short chain dehydroge 99.6 1.4E-14 3.1E-19 125.2 12.2 117 116-232 1-137 (243)
177 PRK07533 enoyl-(acyl carrier p 99.6 1.1E-14 2.3E-19 127.6 11.6 120 113-233 7-152 (258)
178 PRK05693 short chain dehydroge 99.6 1.6E-14 3.4E-19 127.3 12.4 114 116-234 1-134 (274)
179 PRK06505 enoyl-(acyl carrier p 99.6 1E-14 2.2E-19 128.9 11.1 119 114-233 5-149 (271)
180 PRK08416 7-alpha-hydroxysteroi 99.6 1.8E-14 3.9E-19 126.1 12.6 121 113-233 5-155 (260)
181 PRK06077 fabG 3-ketoacyl-(acyl 99.6 2.1E-14 4.7E-19 124.2 12.9 122 114-235 4-146 (252)
182 PRK08415 enoyl-(acyl carrier p 99.6 1.1E-14 2.3E-19 129.1 11.1 118 114-233 3-147 (274)
183 PLN02780 ketoreductase/ oxidor 99.6 8.2E-15 1.8E-19 132.7 10.5 120 115-234 52-197 (320)
184 PLN00141 Tic62-NAD(P)-related 99.6 1.9E-14 4.2E-19 125.5 12.3 120 113-239 14-141 (251)
185 PRK06483 dihydromonapterin red 99.6 2.1E-14 4.5E-19 123.6 12.4 114 116-233 2-138 (236)
186 PRK08594 enoyl-(acyl carrier p 99.6 2.1E-14 4.6E-19 125.8 12.6 121 113-233 4-151 (257)
187 PRK12828 short chain dehydroge 99.6 1.8E-14 3.8E-19 123.4 11.8 121 114-235 5-146 (239)
188 PRK12748 3-ketoacyl-(acyl-carr 99.6 2.2E-14 4.8E-19 125.0 12.6 122 114-235 3-159 (256)
189 PRK07060 short chain dehydroge 99.6 1.9E-14 4.1E-19 124.1 12.0 119 113-235 6-142 (245)
190 KOG0747 Putative NAD+-dependen 99.6 3.1E-15 6.7E-20 129.9 7.0 142 117-263 7-161 (331)
191 PRK12744 short chain dehydroge 99.6 2E-14 4.3E-19 125.4 12.2 117 114-230 6-146 (257)
192 PRK12384 sorbitol-6-phosphate 99.6 2.5E-14 5.5E-19 124.6 12.8 120 116-235 2-147 (259)
193 PRK08220 2,3-dihydroxybenzoate 99.6 3E-14 6.5E-19 123.4 12.9 113 114-234 6-139 (252)
194 PRK08340 glucose-1-dehydrogena 99.6 1.3E-14 2.7E-19 126.8 10.6 118 117-234 1-142 (259)
195 PRK08945 putative oxoacyl-(acy 99.6 1.6E-14 3.5E-19 125.1 11.1 121 113-233 9-155 (247)
196 PRK09291 short chain dehydroge 99.6 2.2E-14 4.7E-19 124.7 11.8 118 116-233 2-135 (257)
197 PF00106 adh_short: short chai 99.6 1E-14 2.2E-19 118.7 9.0 118 117-234 1-139 (167)
198 CHL00194 ycf39 Ycf39; Provisio 99.6 1.8E-14 3.9E-19 130.0 11.5 107 117-233 1-113 (317)
199 PRK06484 short chain dehydroge 99.6 1.3E-14 2.8E-19 139.0 11.1 121 113-235 266-406 (520)
200 PRK12939 short chain dehydroge 99.6 3.5E-14 7.7E-19 122.6 12.7 122 114-235 5-148 (250)
201 PRK06057 short chain dehydroge 99.6 2E-14 4.4E-19 125.2 11.3 118 114-235 5-146 (255)
202 KOG4169 15-hydroxyprostaglandi 99.6 1.4E-14 3.1E-19 122.3 9.6 117 113-233 2-140 (261)
203 PRK12938 acetyacetyl-CoA reduc 99.6 4.2E-14 9.1E-19 122.2 12.9 119 115-233 2-143 (246)
204 PRK08690 enoyl-(acyl carrier p 99.6 2.4E-14 5.2E-19 125.7 11.5 120 114-234 4-151 (261)
205 PRK06550 fabG 3-ketoacyl-(acyl 99.6 3.9E-14 8.3E-19 121.6 12.5 113 114-234 3-131 (235)
206 PRK06603 enoyl-(acyl carrier p 99.6 2.7E-14 5.8E-19 125.3 11.7 119 114-233 6-150 (260)
207 PRK05557 fabG 3-ketoacyl-(acyl 99.6 6.1E-14 1.3E-18 120.6 13.7 124 114-237 3-150 (248)
208 PRK07201 short chain dehydroge 99.6 2.2E-14 4.9E-19 141.0 12.2 123 113-235 368-514 (657)
209 PRK08159 enoyl-(acyl carrier p 99.6 2.8E-14 6.1E-19 126.1 11.6 119 114-233 8-152 (272)
210 PRK12829 short chain dehydroge 99.6 4E-14 8.6E-19 123.4 12.3 118 114-232 9-149 (264)
211 PRK08703 short chain dehydroge 99.6 3.8E-14 8.3E-19 122.2 11.9 120 113-232 3-149 (239)
212 PRK07041 short chain dehydroge 99.6 2E-14 4.4E-19 123.0 10.1 116 120-235 1-129 (230)
213 PRK05653 fabG 3-ketoacyl-(acyl 99.6 5.8E-14 1.3E-18 120.5 12.9 120 114-233 3-144 (246)
214 PLN02657 3,8-divinyl protochlo 99.6 5.2E-14 1.1E-18 130.8 13.5 118 113-235 57-187 (390)
215 TIGR02415 23BDH acetoin reduct 99.6 5E-14 1.1E-18 122.2 12.4 119 117-235 1-143 (254)
216 PRK08219 short chain dehydroge 99.6 4.1E-14 8.9E-19 120.5 11.6 116 116-235 3-134 (227)
217 PRK07984 enoyl-(acyl carrier p 99.5 3.5E-14 7.6E-19 124.9 11.4 119 114-233 4-149 (262)
218 PRK12824 acetoacetyl-CoA reduc 99.5 7E-14 1.5E-18 120.4 13.1 120 116-235 2-144 (245)
219 PRK08324 short chain dehydroge 99.5 4.8E-14 1E-18 139.6 13.4 123 112-234 418-562 (681)
220 PRK06123 short chain dehydroge 99.5 5.5E-14 1.2E-18 121.5 12.2 120 116-235 2-149 (248)
221 PRK06125 short chain dehydroge 99.5 7E-14 1.5E-18 122.1 12.9 120 114-233 5-143 (259)
222 PRK07832 short chain dehydroge 99.5 5.9E-14 1.3E-18 123.6 12.3 117 117-233 1-141 (272)
223 PRK07831 short chain dehydroge 99.5 8.1E-14 1.8E-18 121.9 12.9 122 113-234 14-161 (262)
224 KOG1200 Mitochondrial/plastidi 99.5 4.2E-14 9.1E-19 116.9 10.3 130 113-242 11-164 (256)
225 TIGR02685 pter_reduc_Leis pter 99.5 6E-14 1.3E-18 123.2 11.7 117 117-233 2-163 (267)
226 PRK07069 short chain dehydroge 99.5 7.3E-14 1.6E-18 120.8 12.1 118 118-235 1-143 (251)
227 PRK06947 glucose-1-dehydrogena 99.5 7.3E-14 1.6E-18 120.9 12.0 120 116-235 2-149 (248)
228 PRK08303 short chain dehydroge 99.5 1E-13 2.2E-18 124.7 13.1 120 113-232 5-161 (305)
229 PRK05565 fabG 3-ketoacyl-(acyl 99.5 5.4E-14 1.2E-18 121.1 10.7 121 114-234 3-146 (247)
230 PRK07370 enoyl-(acyl carrier p 99.5 3.3E-14 7.1E-19 124.6 9.4 120 114-233 4-151 (258)
231 PRK06198 short chain dehydroge 99.5 7.1E-14 1.5E-18 121.7 11.3 122 114-235 4-149 (260)
232 PRK06484 short chain dehydroge 99.5 6.6E-14 1.4E-18 134.2 12.1 119 114-234 3-145 (520)
233 PRK07023 short chain dehydroge 99.5 3.3E-14 7.1E-19 122.9 9.0 116 116-235 1-142 (243)
234 PRK06997 enoyl-(acyl carrier p 99.5 5.9E-14 1.3E-18 123.2 10.6 119 114-233 4-149 (260)
235 PRK08217 fabG 3-ketoacyl-(acyl 99.5 9.7E-14 2.1E-18 119.9 11.8 123 114-236 3-157 (253)
236 KOG0725 Reductases with broad 99.5 9.8E-14 2.1E-18 122.8 11.9 124 112-235 4-155 (270)
237 PRK12859 3-ketoacyl-(acyl-carr 99.5 1.3E-13 2.9E-18 120.3 12.6 122 113-234 3-159 (256)
238 TIGR01831 fabG_rel 3-oxoacyl-( 99.5 9.7E-14 2.1E-18 119.4 11.5 117 119-235 1-142 (239)
239 PRK06940 short chain dehydroge 99.5 1.3E-13 2.7E-18 122.0 12.4 113 116-233 2-129 (275)
240 TIGR01829 AcAcCoA_reduct aceto 99.5 1.8E-13 3.8E-18 117.7 12.7 116 117-232 1-139 (242)
241 PRK07889 enoyl-(acyl carrier p 99.5 1.2E-13 2.7E-18 120.8 11.9 117 114-231 5-147 (256)
242 PRK08862 short chain dehydroge 99.5 1.5E-13 3.3E-18 118.4 12.1 119 114-232 3-146 (227)
243 PRK09730 putative NAD(P)-bindi 99.5 2.1E-13 4.5E-18 117.6 12.5 120 116-235 1-148 (247)
244 COG3967 DltE Short-chain dehyd 99.5 1E-13 2.3E-18 115.5 9.9 119 114-235 3-144 (245)
245 PRK07424 bifunctional sterol d 99.5 1.5E-13 3.3E-18 127.9 11.8 105 113-219 175-285 (406)
246 PLN00015 protochlorophyllide r 99.5 1.8E-13 3.9E-18 123.0 11.5 115 120-234 1-141 (308)
247 PRK05786 fabG 3-ketoacyl-(acyl 99.5 2.4E-13 5.3E-18 116.7 11.4 120 114-233 3-139 (238)
248 PRK06924 short chain dehydroge 99.5 1.2E-13 2.6E-18 119.7 9.6 118 116-234 1-145 (251)
249 PRK08017 oxidoreductase; Provi 99.5 2.2E-13 4.7E-18 118.3 11.2 112 117-233 3-136 (256)
250 PRK05599 hypothetical protein; 99.5 3.3E-13 7.2E-18 117.3 12.3 117 117-234 1-141 (246)
251 PRK05884 short chain dehydroge 99.5 2.6E-13 5.7E-18 116.4 11.1 111 118-232 2-133 (223)
252 PRK07074 short chain dehydroge 99.5 6.9E-13 1.5E-17 115.4 13.9 117 116-233 2-139 (257)
253 KOG1372 GDP-mannose 4,6 dehydr 99.5 8.6E-14 1.9E-18 118.9 7.7 148 111-263 23-188 (376)
254 PRK07577 short chain dehydroge 99.5 6E-13 1.3E-17 114.0 12.8 113 115-237 2-134 (234)
255 TIGR03443 alpha_am_amid L-amin 99.5 3.6E-13 7.8E-18 142.6 13.8 146 115-263 970-1154(1389)
256 PRK06953 short chain dehydroge 99.5 4.8E-13 1E-17 114.2 11.9 115 116-235 1-136 (222)
257 PLN00016 RNA-binding protein; 99.5 3.3E-13 7.1E-18 124.7 11.4 117 114-246 50-181 (378)
258 smart00822 PKS_KR This enzymat 99.5 4.4E-13 9.5E-18 108.6 10.8 119 117-235 1-142 (180)
259 PRK08261 fabG 3-ketoacyl-(acyl 99.5 4.4E-13 9.5E-18 126.5 12.5 120 113-234 207-347 (450)
260 TIGR01830 3oxo_ACP_reduc 3-oxo 99.5 6.1E-13 1.3E-17 113.9 12.1 118 119-236 1-142 (239)
261 PF13460 NAD_binding_10: NADH( 99.5 8.5E-13 1.8E-17 109.2 12.5 101 119-239 1-107 (183)
262 PRK12320 hypothetical protein; 99.5 4E-13 8.7E-18 131.9 11.9 111 117-245 1-115 (699)
263 TIGR01500 sepiapter_red sepiap 99.5 3.5E-13 7.6E-18 117.6 10.0 117 118-234 2-155 (256)
264 COG1028 FabG Dehydrogenases wi 99.4 7.3E-13 1.6E-17 114.8 11.4 122 113-234 2-147 (251)
265 PRK07578 short chain dehydroge 99.4 8.7E-13 1.9E-17 110.8 11.4 100 117-233 1-115 (199)
266 KOG1209 1-Acyl dihydroxyaceton 99.4 3.8E-13 8.2E-18 112.8 8.2 117 115-235 6-144 (289)
267 PLN02730 enoyl-[acyl-carrier-p 99.4 1.1E-12 2.3E-17 118.1 11.8 120 113-233 6-182 (303)
268 PRK08177 short chain dehydroge 99.4 8.1E-13 1.7E-17 113.1 10.0 112 116-231 1-132 (225)
269 KOG1221 Acyl-CoA reductase [Li 99.4 2.2E-12 4.8E-17 120.5 11.3 133 110-247 6-170 (467)
270 PRK05865 hypothetical protein; 99.4 3.7E-12 8.1E-17 127.6 12.4 99 117-232 1-105 (854)
271 PRK09009 C factor cell-cell si 99.4 7.5E-12 1.6E-16 107.5 12.4 108 117-231 1-133 (235)
272 KOG1207 Diacetyl reductase/L-x 99.3 4E-13 8.7E-18 109.4 3.0 122 112-235 3-142 (245)
273 COG1090 Predicted nucleoside-d 99.3 4.9E-12 1.1E-16 110.0 9.7 122 119-247 1-128 (297)
274 KOG1199 Short-chain alcohol de 99.3 1.2E-12 2.6E-17 106.5 3.5 120 114-235 7-159 (260)
275 KOG1610 Corticosteroid 11-beta 99.3 3.4E-11 7.4E-16 106.5 12.6 120 113-233 26-168 (322)
276 KOG1210 Predicted 3-ketosphing 99.3 2.2E-11 4.8E-16 107.6 10.2 119 117-235 34-178 (331)
277 PRK06300 enoyl-(acyl carrier p 99.3 1.7E-11 3.8E-16 110.0 9.6 122 112-233 4-181 (299)
278 TIGR02813 omega_3_PfaA polyket 99.3 3.5E-11 7.6E-16 131.8 12.2 123 115-237 1996-2184(2582)
279 PF08659 KR: KR domain; Inter 99.2 5.7E-11 1.2E-15 99.0 10.1 122 118-239 2-146 (181)
280 PRK06720 hypothetical protein; 99.2 1.7E-10 3.7E-15 95.2 12.2 121 113-233 13-160 (169)
281 KOG1014 17 beta-hydroxysteroid 99.2 1.9E-11 4.2E-16 108.0 6.0 118 116-233 49-190 (312)
282 PF13561 adh_short_C2: Enoyl-( 99.2 2.3E-11 4.9E-16 105.2 4.4 113 123-235 1-139 (241)
283 TIGR03649 ergot_EASG ergot alk 99.1 4E-10 8.7E-15 99.8 10.0 96 118-234 1-109 (285)
284 KOG1611 Predicted short chain- 99.1 6.4E-10 1.4E-14 94.2 10.6 117 116-232 3-157 (249)
285 KOG1431 GDP-L-fucose synthetas 99.0 2.4E-10 5.3E-15 96.8 4.4 129 116-263 1-140 (315)
286 PRK12428 3-alpha-hydroxysteroi 98.9 1.2E-09 2.6E-14 94.6 6.0 92 132-237 1-104 (241)
287 KOG2774 NAD dependent epimeras 98.9 1.2E-09 2.7E-14 93.1 4.7 138 114-263 42-188 (366)
288 PTZ00325 malate dehydrogenase; 98.8 8.1E-08 1.7E-12 87.0 13.0 117 114-234 6-129 (321)
289 KOG1204 Predicted dehydrogenas 98.8 6E-09 1.3E-13 88.4 4.2 119 115-234 5-149 (253)
290 KOG2865 NADH:ubiquinone oxidor 98.8 1.7E-08 3.8E-13 88.3 7.2 116 114-233 59-180 (391)
291 KOG1203 Predicted dehydrogenas 98.8 3.1E-08 6.6E-13 91.6 9.2 122 110-234 73-205 (411)
292 PF05368 NmrA: NmrA-like famil 98.8 2.9E-08 6.3E-13 85.4 8.1 101 119-234 1-107 (233)
293 PRK08309 short chain dehydroge 98.7 9.3E-08 2E-12 79.5 8.6 96 117-231 1-113 (177)
294 KOG1478 3-keto sterol reductas 98.7 1E-07 2.2E-12 82.3 8.5 120 115-234 2-179 (341)
295 COG0702 Predicted nucleoside-d 98.6 4.6E-07 1E-11 79.0 10.3 106 117-235 1-112 (275)
296 PLN00106 malate dehydrogenase 98.6 1.7E-06 3.7E-11 78.5 14.0 111 116-230 18-135 (323)
297 KOG4039 Serine/threonine kinas 98.6 9.6E-08 2.1E-12 78.3 5.2 113 113-234 15-135 (238)
298 cd01336 MDH_cytoplasmic_cytoso 98.5 1.4E-06 3E-11 79.2 12.3 112 117-230 3-129 (325)
299 COG2910 Putative NADH-flavin r 98.5 1.5E-06 3.3E-11 71.8 10.9 107 117-238 1-114 (211)
300 PRK09620 hypothetical protein; 98.4 3.8E-07 8.3E-12 78.9 5.2 76 114-192 1-99 (229)
301 PRK05086 malate dehydrogenase; 98.4 8.3E-06 1.8E-10 73.8 13.2 111 117-230 1-118 (312)
302 PRK06732 phosphopantothenate-- 98.3 3.4E-06 7.4E-11 73.0 8.3 68 119-192 18-93 (229)
303 PRK13656 trans-2-enoyl-CoA red 98.3 3.4E-06 7.4E-11 77.8 8.7 77 114-191 39-142 (398)
304 COG1748 LYS9 Saccharopine dehy 98.3 4E-06 8.7E-11 77.4 8.9 71 116-189 1-77 (389)
305 PF00056 Ldh_1_N: lactate/mala 98.2 4E-05 8.6E-10 61.4 12.7 112 117-230 1-119 (141)
306 PRK05579 bifunctional phosphop 98.2 5.9E-06 1.3E-10 77.1 7.7 70 113-192 185-279 (399)
307 cd01078 NAD_bind_H4MPT_DH NADP 98.1 6.5E-06 1.4E-10 69.1 7.0 77 113-189 25-106 (194)
308 PF01488 Shikimate_DH: Shikima 98.1 1.1E-05 2.5E-10 63.9 7.3 77 113-191 9-86 (135)
309 PRK14106 murD UDP-N-acetylmura 98.1 1.6E-05 3.5E-10 75.1 9.5 76 114-190 3-78 (450)
310 cd00704 MDH Malate dehydrogena 98.1 5.7E-05 1.2E-09 68.7 12.2 109 118-230 2-127 (323)
311 TIGR02114 coaB_strep phosphopa 98.0 1.2E-05 2.6E-10 69.5 6.8 91 120-216 18-117 (227)
312 PRK14982 acyl-ACP reductase; P 98.0 8.6E-06 1.9E-10 74.3 5.9 75 112-192 151-227 (340)
313 PF03435 Saccharop_dh: Sacchar 98.0 2.2E-05 4.7E-10 72.9 8.1 89 119-227 1-96 (386)
314 PRK00066 ldh L-lactate dehydro 97.9 0.00023 4.9E-09 64.5 13.7 111 115-230 5-123 (315)
315 cd05291 HicDH_like L-2-hydroxy 97.9 0.0003 6.6E-09 63.4 13.6 109 117-230 1-118 (306)
316 cd05294 LDH-like_MDH_nadp A la 97.9 0.00034 7.3E-09 63.3 13.4 110 117-230 1-122 (309)
317 TIGR01758 MDH_euk_cyt malate d 97.9 0.00016 3.6E-09 65.7 11.4 111 118-230 1-126 (324)
318 cd01338 MDH_choloroplast_like 97.9 0.00033 7.2E-09 63.6 13.2 111 116-230 2-129 (322)
319 COG0623 FabI Enoyl-[acyl-carri 97.8 0.00029 6.2E-09 60.4 10.7 116 113-229 3-144 (259)
320 cd01337 MDH_glyoxysomal_mitoch 97.8 0.00052 1.1E-08 62.1 13.1 110 117-230 1-118 (310)
321 PRK12475 thiamine/molybdopteri 97.8 0.0002 4.4E-09 65.5 10.1 105 113-235 21-154 (338)
322 PRK12548 shikimate 5-dehydroge 97.7 9E-05 1.9E-09 66.3 7.4 77 113-190 123-209 (289)
323 TIGR00521 coaBC_dfp phosphopan 97.7 1.3E-05 2.8E-10 74.6 1.7 71 113-193 182-278 (390)
324 COG0039 Mdh Malate/lactate deh 97.7 0.00052 1.1E-08 61.8 11.8 110 117-230 1-118 (313)
325 PRK02472 murD UDP-N-acetylmura 97.7 0.00023 4.9E-09 67.2 9.8 76 114-191 3-79 (447)
326 PRK07688 thiamine/molybdopteri 97.6 0.00041 8.9E-09 63.5 10.2 107 112-236 20-155 (339)
327 PLN00112 malate dehydrogenase 97.6 0.0013 2.7E-08 62.2 13.1 112 115-230 99-227 (444)
328 TIGR01772 MDH_euk_gproteo mala 97.6 0.0013 2.8E-08 59.6 12.7 109 118-230 1-117 (312)
329 PLN02968 Probable N-acetyl-gam 97.5 0.00092 2E-08 62.1 11.3 103 114-236 36-141 (381)
330 PF00899 ThiF: ThiF family; I 97.5 0.00049 1.1E-08 54.3 8.0 102 116-235 2-130 (135)
331 cd05293 LDH_1 A subgroup of L- 97.5 0.0021 4.5E-08 58.2 12.8 109 117-230 4-121 (312)
332 TIGR01759 MalateDH-SF1 malate 97.5 0.0026 5.6E-08 57.9 13.4 109 117-229 4-129 (323)
333 PRK05442 malate dehydrogenase; 97.5 0.0023 5E-08 58.3 12.8 112 115-230 3-131 (326)
334 PF01118 Semialdhyde_dh: Semia 97.5 0.0024 5.3E-08 49.4 11.3 96 118-231 1-99 (121)
335 PRK06223 malate dehydrogenase; 97.4 0.002 4.3E-08 58.0 11.8 110 116-230 2-120 (307)
336 PF04127 DFP: DNA / pantothena 97.4 0.00058 1.3E-08 57.2 7.7 61 124-192 27-94 (185)
337 PTZ00117 malate dehydrogenase; 97.4 0.0048 1E-07 56.0 14.3 112 115-230 4-123 (319)
338 TIGR02356 adenyl_thiF thiazole 97.4 0.00094 2E-08 56.6 9.1 105 113-235 18-149 (202)
339 cd05292 LDH_2 A subgroup of L- 97.4 0.0038 8.2E-08 56.4 13.6 109 117-230 1-117 (308)
340 PRK14874 aspartate-semialdehyd 97.4 0.0008 1.7E-08 61.5 9.2 93 116-231 1-96 (334)
341 cd00650 LDH_MDH_like NAD-depen 97.4 0.0037 8.1E-08 55.0 12.9 110 119-230 1-120 (263)
342 cd05290 LDH_3 A subgroup of L- 97.4 0.0044 9.4E-08 56.0 13.3 108 118-230 1-120 (307)
343 PRK00258 aroE shikimate 5-dehy 97.4 0.00052 1.1E-08 61.0 7.2 76 113-191 120-196 (278)
344 TIGR00507 aroE shikimate 5-deh 97.4 0.00062 1.3E-08 60.2 7.5 75 114-191 115-189 (270)
345 PLN02602 lactate dehydrogenase 97.4 0.0042 9E-08 57.1 13.0 109 117-230 38-155 (350)
346 PTZ00082 L-lactate dehydrogena 97.4 0.0077 1.7E-07 54.8 14.6 114 114-230 4-129 (321)
347 TIGR00715 precor6x_red precorr 97.4 0.0016 3.4E-08 57.4 9.8 68 117-190 1-75 (256)
348 cd00757 ThiF_MoeB_HesA_family 97.3 0.0014 3.1E-08 56.5 9.1 105 113-235 18-149 (228)
349 cd01483 E1_enzyme_family Super 97.3 0.0031 6.7E-08 50.1 10.3 100 118-235 1-127 (143)
350 KOG2733 Uncharacterized membra 97.3 0.00062 1.3E-08 61.8 6.2 74 118-191 7-94 (423)
351 TIGR01757 Malate-DH_plant mala 97.3 0.004 8.6E-08 57.9 11.7 110 117-230 45-171 (387)
352 cd00300 LDH_like L-lactate deh 97.2 0.0051 1.1E-07 55.3 12.0 108 119-230 1-116 (300)
353 TIGR02355 moeB molybdopterin s 97.2 0.0027 5.7E-08 55.4 9.5 106 112-235 20-152 (240)
354 PRK05690 molybdopterin biosynt 97.2 0.0029 6.3E-08 55.3 9.6 106 112-235 28-160 (245)
355 cd01491 Ube1_repeat1 Ubiquitin 97.2 0.0031 6.6E-08 56.4 9.9 106 113-236 16-144 (286)
356 PRK08762 molybdopterin biosynt 97.2 0.0021 4.6E-08 59.6 9.2 105 113-235 132-263 (376)
357 PRK08644 thiamine biosynthesis 97.2 0.0041 8.8E-08 53.2 10.2 106 113-236 25-157 (212)
358 PRK08328 hypothetical protein; 97.2 0.0023 5.1E-08 55.4 8.8 106 113-236 24-157 (231)
359 cd01065 NAD_bind_Shikimate_DH 97.2 0.0015 3.2E-08 52.4 7.0 76 114-192 17-93 (155)
360 PRK06718 precorrin-2 dehydroge 97.2 0.0021 4.5E-08 54.6 8.2 76 109-188 3-78 (202)
361 PRK05597 molybdopterin biosynt 97.1 0.003 6.4E-08 58.2 9.6 106 112-235 24-156 (355)
362 TIGR01763 MalateDH_bact malate 97.1 0.0067 1.4E-07 54.7 11.7 109 117-230 2-119 (305)
363 cd01075 NAD_bind_Leu_Phe_Val_D 97.1 0.0012 2.5E-08 56.0 6.4 72 111-189 23-94 (200)
364 cd01492 Aos1_SUMO Ubiquitin ac 97.1 0.0039 8.4E-08 52.7 9.2 106 113-236 18-149 (197)
365 cd01485 E1-1_like Ubiquitin ac 97.1 0.0064 1.4E-07 51.4 10.2 106 113-236 16-152 (198)
366 TIGR01470 cysG_Nterm siroheme 97.1 0.0029 6.4E-08 53.8 8.1 77 109-189 2-78 (205)
367 PRK00436 argC N-acetyl-gamma-g 97.0 0.0058 1.3E-07 56.0 10.5 98 116-234 2-104 (343)
368 PF01113 DapB_N: Dihydrodipico 97.0 0.0035 7.7E-08 48.9 7.8 96 118-231 2-100 (124)
369 PRK04148 hypothetical protein; 97.0 0.0061 1.3E-07 48.3 9.0 89 115-227 16-107 (134)
370 cd00755 YgdL_like Family of ac 97.0 0.0056 1.2E-07 53.1 9.6 108 113-238 8-143 (231)
371 cd01489 Uba2_SUMO Ubiquitin ac 97.0 0.005 1.1E-07 55.7 9.2 101 118-236 1-129 (312)
372 cd05295 MDH_like Malate dehydr 97.0 0.0078 1.7E-07 57.0 10.7 110 117-230 124-250 (452)
373 PRK12549 shikimate 5-dehydroge 97.0 0.0028 6.1E-08 56.6 7.4 74 114-188 125-200 (284)
374 PRK08223 hypothetical protein; 97.0 0.0054 1.2E-07 54.7 9.1 107 112-234 23-156 (287)
375 PRK01438 murD UDP-N-acetylmura 96.9 0.0061 1.3E-07 58.2 10.2 77 113-191 13-89 (480)
376 PRK07878 molybdopterin biosynt 96.9 0.005 1.1E-07 57.5 9.1 106 113-236 39-171 (392)
377 PRK05671 aspartate-semialdehyd 96.9 0.0076 1.6E-07 55.1 10.1 94 116-232 4-100 (336)
378 KOG4288 Predicted oxidoreducta 96.9 0.0025 5.5E-08 54.7 6.4 112 114-231 50-163 (283)
379 TIGR01809 Shik-DH-AROM shikima 96.9 0.0029 6.3E-08 56.4 7.1 76 114-191 123-201 (282)
380 PLN02520 bifunctional 3-dehydr 96.9 0.0027 5.8E-08 61.6 7.4 74 113-191 376-450 (529)
381 PRK14192 bifunctional 5,10-met 96.9 0.0038 8.2E-08 55.8 7.7 37 112-148 155-191 (283)
382 cd01339 LDH-like_MDH L-lactate 96.9 0.017 3.6E-07 51.9 11.6 107 119-230 1-116 (300)
383 TIGR02853 spore_dpaA dipicolin 96.8 0.0025 5.5E-08 57.0 6.1 70 113-188 148-217 (287)
384 TIGR01771 L-LDH-NAD L-lactate 96.8 0.017 3.7E-07 52.0 11.5 105 121-230 1-114 (299)
385 PRK08664 aspartate-semialdehyd 96.8 0.013 2.8E-07 53.8 11.0 96 116-231 3-109 (349)
386 PRK05600 thiamine biosynthesis 96.8 0.0073 1.6E-07 56.0 9.3 106 112-235 37-169 (370)
387 TIGR01850 argC N-acetyl-gamma- 96.8 0.0086 1.9E-07 55.0 9.7 97 117-233 1-103 (346)
388 COG3268 Uncharacterized conser 96.8 0.0027 5.8E-08 57.3 5.9 74 117-192 7-83 (382)
389 cd01484 E1-2_like Ubiquitin ac 96.8 0.01 2.2E-07 51.5 9.3 100 118-235 1-129 (234)
390 PRK15116 sulfur acceptor prote 96.8 0.013 2.9E-07 51.8 10.0 108 113-238 27-162 (268)
391 cd01487 E1_ThiF_like E1_ThiF_l 96.7 0.014 3E-07 48.3 9.3 101 118-236 1-128 (174)
392 PRK07411 hypothetical protein; 96.7 0.0097 2.1E-07 55.5 9.0 107 112-236 34-167 (390)
393 PLN02383 aspartate semialdehyd 96.7 0.011 2.5E-07 54.2 9.2 95 115-232 6-103 (344)
394 PRK06719 precorrin-2 dehydroge 96.7 0.0091 2E-07 48.6 7.7 74 108-188 5-78 (157)
395 PRK01710 murD UDP-N-acetylmura 96.7 0.013 2.8E-07 55.8 9.9 78 113-191 11-88 (458)
396 PRK13940 glutamyl-tRNA reducta 96.6 0.0054 1.2E-07 57.6 7.1 76 113-192 178-254 (414)
397 cd01080 NAD_bind_m-THF_DH_Cycl 96.6 0.0064 1.4E-07 50.1 6.7 38 113-150 41-78 (168)
398 COG0604 Qor NADPH:quinone redu 96.6 0.0033 7.1E-08 57.3 5.2 73 116-189 143-220 (326)
399 TIGR01296 asd_B aspartate-semi 96.6 0.0037 8E-08 57.2 5.6 67 118-189 1-70 (339)
400 COG0569 TrkA K+ transport syst 96.6 0.0075 1.6E-07 52.0 7.0 69 117-189 1-75 (225)
401 PRK06129 3-hydroxyacyl-CoA deh 96.6 0.013 2.8E-07 52.8 8.7 35 117-152 3-37 (308)
402 PRK00048 dihydrodipicolinate r 96.5 0.021 4.6E-07 50.2 9.8 65 117-188 2-68 (257)
403 COG2085 Predicted dinucleotide 96.5 0.006 1.3E-07 51.8 5.9 44 116-160 1-44 (211)
404 PF13241 NAD_binding_7: Putati 96.5 0.039 8.4E-07 41.5 9.9 95 112-235 3-97 (103)
405 PF02826 2-Hacid_dh_C: D-isome 96.5 0.008 1.7E-07 49.8 6.5 72 109-189 29-100 (178)
406 TIGR00978 asd_EA aspartate-sem 96.5 0.036 7.9E-07 50.7 11.3 98 117-232 1-107 (341)
407 PRK08306 dipicolinate synthase 96.4 0.0063 1.4E-07 54.7 5.9 70 113-188 149-218 (296)
408 KOG1494 NAD-dependent malate d 96.4 0.029 6.2E-07 49.7 9.5 114 114-230 26-146 (345)
409 TIGR01915 npdG NADPH-dependent 96.4 0.009 2E-07 51.1 6.3 37 117-153 1-37 (219)
410 PF03721 UDPG_MGDP_dh_N: UDP-g 96.4 0.015 3.3E-07 48.6 7.4 35 117-152 1-35 (185)
411 COG4982 3-oxoacyl-[acyl-carrie 96.4 0.074 1.6E-06 51.8 12.8 127 109-235 389-561 (866)
412 PRK00141 murD UDP-N-acetylmura 96.3 0.024 5.2E-07 54.2 9.6 74 113-191 12-85 (473)
413 TIGR01408 Ube1 ubiquitin-activ 96.3 0.016 3.5E-07 60.1 8.8 106 113-236 21-151 (1008)
414 PRK09310 aroDE bifunctional 3- 96.3 0.0091 2E-07 57.2 6.5 72 113-190 329-400 (477)
415 PRK14175 bifunctional 5,10-met 96.3 0.017 3.6E-07 51.6 7.5 38 112-149 154-191 (286)
416 PF00670 AdoHcyase_NAD: S-aden 96.2 0.017 3.6E-07 47.2 6.4 70 112-190 19-88 (162)
417 PF02882 THF_DHG_CYH_C: Tetrah 96.1 0.023 5E-07 46.4 7.2 39 112-150 32-70 (160)
418 cd01490 Ube1_repeat2 Ubiquitin 96.1 0.035 7.6E-07 52.4 9.3 101 118-236 1-137 (435)
419 COG0771 MurD UDP-N-acetylmuram 96.1 0.04 8.6E-07 52.2 9.7 77 114-192 5-81 (448)
420 TIGR01035 hemA glutamyl-tRNA r 96.1 0.013 2.9E-07 55.1 6.5 72 114-190 178-250 (417)
421 PRK14027 quinate/shikimate deh 96.1 0.012 2.7E-07 52.5 6.0 74 114-190 125-204 (283)
422 PRK04308 murD UDP-N-acetylmura 96.0 0.069 1.5E-06 50.5 11.0 75 114-191 3-78 (445)
423 PRK00045 hemA glutamyl-tRNA re 96.0 0.016 3.4E-07 54.7 6.6 73 114-191 180-253 (423)
424 TIGR02354 thiF_fam2 thiamine b 96.0 0.099 2.2E-06 44.2 10.8 36 113-149 18-54 (200)
425 TIGR01745 asd_gamma aspartate- 96.0 0.062 1.3E-06 49.6 10.1 96 117-235 1-101 (366)
426 PRK13982 bifunctional SbtC-lik 96.0 0.031 6.7E-07 53.4 8.3 72 113-192 253-346 (475)
427 COG0373 HemA Glutamyl-tRNA red 95.9 0.021 4.6E-07 53.4 6.9 75 114-193 176-251 (414)
428 cd08266 Zn_ADH_like1 Alcohol d 95.9 0.053 1.1E-06 48.2 9.2 39 114-152 165-203 (342)
429 cd05212 NAD_bind_m-THF_DH_Cycl 95.9 0.036 7.8E-07 44.3 7.2 39 111-149 23-61 (140)
430 PRK08040 putative semialdehyde 95.9 0.042 9.1E-07 50.3 8.5 96 115-233 3-101 (336)
431 cd05213 NAD_bind_Glutamyl_tRNA 95.9 0.019 4.1E-07 51.9 6.3 72 114-190 176-248 (311)
432 KOG0023 Alcohol dehydrogenase, 95.9 0.014 3.1E-07 52.5 5.2 72 115-188 181-254 (360)
433 PRK14851 hypothetical protein; 95.9 0.05 1.1E-06 54.3 9.5 105 112-232 39-170 (679)
434 PRK12749 quinate/shikimate deh 95.8 0.043 9.4E-07 49.1 8.2 77 113-190 121-206 (288)
435 cd08259 Zn_ADH5 Alcohol dehydr 95.8 0.021 4.5E-07 50.9 6.2 71 115-189 162-235 (332)
436 PLN02819 lysine-ketoglutarate 95.8 0.035 7.6E-07 57.7 8.5 72 114-189 567-657 (1042)
437 PRK09496 trkA potassium transp 95.8 0.035 7.5E-07 52.4 7.9 67 117-188 1-73 (453)
438 PRK05476 S-adenosyl-L-homocyst 95.8 0.021 4.6E-07 53.8 6.3 68 113-189 209-276 (425)
439 PF03446 NAD_binding_2: NAD bi 95.8 0.015 3.3E-07 47.4 4.7 65 116-188 1-65 (163)
440 PRK09496 trkA potassium transp 95.8 0.075 1.6E-06 50.1 10.2 71 114-188 229-305 (453)
441 PLN00203 glutamyl-tRNA reducta 95.8 0.028 6E-07 54.4 7.1 75 114-190 264-339 (519)
442 cd08293 PTGR2 Prostaglandin re 95.8 0.015 3.3E-07 52.4 5.1 72 117-189 156-233 (345)
443 TIGR00518 alaDH alanine dehydr 95.8 0.016 3.6E-07 53.6 5.3 73 115-190 166-240 (370)
444 COG1648 CysG Siroheme synthase 95.8 0.054 1.2E-06 46.3 8.1 77 108-188 4-80 (210)
445 PRK11064 wecC UDP-N-acetyl-D-m 95.7 0.07 1.5E-06 50.2 9.6 38 116-154 3-40 (415)
446 PRK14194 bifunctional 5,10-met 95.7 0.035 7.6E-07 49.9 7.2 41 111-151 154-194 (301)
447 PRK03369 murD UDP-N-acetylmura 95.7 0.061 1.3E-06 51.6 9.3 72 114-191 10-81 (488)
448 KOG1198 Zinc-binding oxidoredu 95.7 0.02 4.3E-07 52.6 5.5 75 113-190 155-235 (347)
449 PRK10792 bifunctional 5,10-met 95.7 0.044 9.5E-07 48.9 7.4 38 112-149 155-192 (285)
450 PRK05562 precorrin-2 dehydroge 95.7 0.15 3.3E-06 43.9 10.5 77 108-188 17-93 (223)
451 COG0169 AroE Shikimate 5-dehyd 95.7 0.048 1E-06 48.7 7.6 110 113-224 123-244 (283)
452 cd08295 double_bond_reductase_ 95.6 0.023 4.9E-07 51.4 5.7 39 114-152 150-188 (338)
453 COG0136 Asd Aspartate-semialde 95.5 0.095 2.1E-06 47.6 9.2 26 116-141 1-26 (334)
454 PRK07574 formate dehydrogenase 95.5 0.031 6.8E-07 52.1 6.2 70 112-189 188-257 (385)
455 PRK08655 prephenate dehydrogen 95.5 0.033 7.2E-07 52.8 6.5 66 117-188 1-66 (437)
456 PRK14852 hypothetical protein; 95.5 0.075 1.6E-06 54.7 9.3 108 112-235 328-462 (989)
457 PRK15469 ghrA bifunctional gly 95.5 0.057 1.2E-06 48.9 7.7 66 113-188 133-198 (312)
458 smart00859 Semialdhyde_dh Semi 95.5 0.19 4E-06 38.6 9.6 30 118-147 1-31 (122)
459 PRK00421 murC UDP-N-acetylmura 95.5 0.094 2E-06 49.9 9.5 73 113-191 4-77 (461)
460 cd00401 AdoHcyase S-adenosyl-L 95.5 0.043 9.2E-07 51.6 6.9 68 113-189 199-266 (413)
461 PF02254 TrkA_N: TrkA-N domain 95.4 0.054 1.2E-06 41.0 6.4 64 119-188 1-70 (116)
462 cd05191 NAD_bind_amino_acid_DH 95.4 0.089 1.9E-06 38.0 7.2 35 113-148 20-55 (86)
463 PRK14176 bifunctional 5,10-met 95.4 0.059 1.3E-06 48.1 7.3 37 112-148 160-196 (287)
464 PLN02494 adenosylhomocysteinas 95.4 0.039 8.4E-07 52.5 6.5 68 113-189 251-318 (477)
465 KOG2018 Predicted dinucleotide 95.4 0.08 1.7E-06 47.6 7.9 108 114-239 72-207 (430)
466 PRK04690 murD UDP-N-acetylmura 95.3 0.15 3.3E-06 48.7 10.3 75 114-191 6-80 (468)
467 PRK07877 hypothetical protein; 95.3 0.088 1.9E-06 52.9 8.9 101 112-231 103-230 (722)
468 PRK06436 glycerate dehydrogena 95.3 0.067 1.4E-06 48.3 7.4 65 112-189 118-182 (303)
469 cd01493 APPBP1_RUB Ubiquitin a 95.3 0.13 2.9E-06 48.5 9.6 115 114-246 18-165 (425)
470 cd05276 p53_inducible_oxidored 95.3 0.03 6.4E-07 49.1 5.1 37 115-151 139-175 (323)
471 PRK14189 bifunctional 5,10-met 95.2 0.062 1.4E-06 48.0 6.9 37 112-148 154-190 (285)
472 TIGR03026 NDP-sugDHase nucleot 95.2 0.15 3.3E-06 47.8 9.9 35 118-153 2-36 (411)
473 COG0002 ArgC Acetylglutamate s 95.2 0.044 9.5E-07 49.9 5.8 33 116-148 2-35 (349)
474 PRK14188 bifunctional 5,10-met 95.2 0.066 1.4E-06 48.1 7.0 36 112-147 154-189 (296)
475 PRK11199 tyrA bifunctional cho 95.2 0.039 8.5E-07 51.2 5.7 35 115-149 97-131 (374)
476 cd01488 Uba3_RUB Ubiquitin act 95.2 0.18 3.8E-06 45.3 9.7 70 118-188 1-96 (291)
477 PTZ00075 Adenosylhomocysteinas 95.1 0.061 1.3E-06 51.3 6.9 69 112-189 250-318 (476)
478 PRK10637 cysG siroheme synthas 95.1 0.2 4.3E-06 47.8 10.5 77 108-188 4-80 (457)
479 PLN03154 putative allyl alcoho 95.1 0.034 7.3E-07 50.8 5.1 38 114-151 157-194 (348)
480 PRK13243 glyoxylate reductase; 95.1 0.058 1.2E-06 49.3 6.6 68 111-188 145-212 (333)
481 cd08253 zeta_crystallin Zeta-c 95.1 0.043 9.4E-07 48.2 5.5 39 114-152 143-181 (325)
482 PRK11559 garR tartronate semia 95.0 0.079 1.7E-06 47.2 7.1 64 117-188 3-66 (296)
483 PRK14180 bifunctional 5,10-met 95.0 0.092 2E-06 46.8 7.3 39 111-149 153-191 (282)
484 TIGR01408 Ube1 ubiquitin-activ 95.0 0.12 2.6E-06 53.9 9.1 106 113-236 416-557 (1008)
485 COG2130 Putative NADP-dependen 95.0 0.09 1.9E-06 47.1 7.1 104 111-237 146-257 (340)
486 PRK14173 bifunctional 5,10-met 95.0 0.09 1.9E-06 47.0 7.2 38 112-149 151-188 (287)
487 PRK05447 1-deoxy-D-xylulose 5- 95.0 0.19 4E-06 46.8 9.4 32 116-147 1-34 (385)
488 PF00070 Pyr_redox: Pyridine n 94.9 0.075 1.6E-06 37.7 5.5 35 118-153 1-35 (80)
489 cd08294 leukotriene_B4_DH_like 94.9 0.068 1.5E-06 47.7 6.4 37 115-151 143-179 (329)
490 PLN02928 oxidoreductase family 94.9 0.069 1.5E-06 49.1 6.5 78 111-189 154-235 (347)
491 PRK10669 putative cation:proto 94.9 0.19 4.1E-06 49.1 9.8 65 118-188 419-489 (558)
492 TIGR00936 ahcY adenosylhomocys 94.9 0.088 1.9E-06 49.4 7.1 68 113-189 192-259 (406)
493 PRK14191 bifunctional 5,10-met 94.9 0.1 2.2E-06 46.6 7.2 37 112-148 153-189 (285)
494 TIGR02825 B4_12hDH leukotriene 94.9 0.054 1.2E-06 48.6 5.6 37 115-151 138-174 (325)
495 PRK11863 N-acetyl-gamma-glutam 94.9 0.23 5.1E-06 45.0 9.6 88 116-238 2-96 (313)
496 cd08230 glucose_DH Glucose deh 94.8 0.084 1.8E-06 48.1 6.9 73 115-189 172-247 (355)
497 cd05188 MDR Medium chain reduc 94.8 0.053 1.2E-06 46.4 5.3 37 114-151 133-169 (271)
498 COG0111 SerA Phosphoglycerate 94.8 0.085 1.8E-06 48.1 6.7 39 110-149 136-174 (324)
499 PRK14172 bifunctional 5,10-met 94.8 0.11 2.4E-06 46.2 7.2 37 112-148 154-190 (278)
500 PRK14177 bifunctional 5,10-met 94.8 0.11 2.3E-06 46.4 7.1 39 111-149 154-192 (284)
No 1
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=100.00 E-value=8.7e-48 Score=360.84 Aligned_cols=262 Identities=79% Similarity=1.199 Sum_probs=208.9
Q ss_pred cccccCcccccccccccCCCCCCCCCCCCCCCCCCchhhhHHHhhhHHHHHHHHHHHHHHHHhhcCCcCCCCCCCCCCCc
Q 024766 2 KLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPILSRLGPPQELHPF 81 (263)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~p~~s~~~~~~~~~~~ 81 (263)
||||||..+||+++..+...++.|+|||.++++|+||+++|+|+|||++|+|+||+|+++||+++|+++++++..+....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (436)
T PLN02166 3 QLHKQMSVNHRRDEEIPTSQSSPYSPKTLKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPSLSRLGPAESTSLI 82 (436)
T ss_pred chhhcCCccccCCCCCCccccCCCCCCCCCCCccccchHHHHHHhhhHHHHHHHHHHHHHHHhhCCccccCCcccccccc
Confidence 89999999999996656545899999977667999999999999999999999999999999999998877664322221
Q ss_pred cc---hhhhhhccccccccccccCcccCCCCccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhh
Q 024766 82 HA---LTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV 158 (263)
Q Consensus 82 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~ 158 (263)
.. ......................++.|.+...+.++|+||||+||||++|+++|+++|++|++++|......+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~ 162 (436)
T PLN02166 83 TRSVSIAVTDSPPSSSTFNSSGGGGRTGRVPVGIGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLV 162 (436)
T ss_pred ccccccccccCccchhhccccccccccCCCCcccccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhh
Confidence 11 000000011111111111244678899999999999999999999999999999999999999986544333333
Q ss_pred hhcCCCceEEEEccccccccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCC
Q 024766 159 HHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL 238 (263)
Q Consensus 159 ~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~ 238 (263)
......+++++..|+.++.+.++|+|||+|+...+.....++...+++|+.|+.+++++|++.++++|++||.+|||++.
T Consensus 163 ~~~~~~~~~~~~~Di~~~~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~ 242 (436)
T PLN02166 163 HLFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPL 242 (436)
T ss_pred hhccCCceEEEECccccccccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCC
Confidence 33344578899999999888899999999987655555567889999999999999999999888999999999999887
Q ss_pred CCCcCCCCCCCCCCCCcCccccccC
Q 024766 239 EHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 239 ~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
+.+.+|++|...+|..+.+.|+.+|
T Consensus 243 ~~p~~E~~~~~~~p~~p~s~Yg~SK 267 (436)
T PLN02166 243 EHPQKETYWGNVNPIGERSCYDEGK 267 (436)
T ss_pred CCCCCccccccCCCCCCCCchHHHH
Confidence 7789999877778888899999887
No 2
>PLN02206 UDP-glucuronate decarboxylase
Probab=100.00 E-value=6.8e-46 Score=348.58 Aligned_cols=257 Identities=60% Similarity=0.975 Sum_probs=201.5
Q ss_pred cCcccccccccccCCCCCCCCCCCCCCCCCCchhhhHHHhhhHHHHHHHHHHHHHHHHhhcCCcCCCCCC-CCCCCccch
Q 024766 6 QSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPILSRLGPP-QELHPFHAL 84 (263)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~p~~s~~~~~-~~~~~~~~~ 84 (263)
+|||+||+++..+. .++.|+|||+|||+|+||+++|+|+|||++|+|+||+|+++||+++|+++++++. .+.......
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (442)
T PLN02206 2 ASELINRRHEETQP-TADAYYPKPIKPWFVVTRPIRYMLREQRLVFVLVGIAIATLVFTIFPSSSQPSPYSVDPLSGYGI 80 (442)
T ss_pred CccccccCCCCCCC-CCCCCCCCCCCCcccCccHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcCCCCcccccccccccc
Confidence 69999999954343 4899999999999999999999999999999999999999999999887655441 111111100
Q ss_pred hhhhhc-ccccccc------ccccCcccCCCCccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhh
Q 024766 85 TANQQR-QSFQFHR------TSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL 157 (263)
Q Consensus 85 ~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~ 157 (263)
...... .+.+... ...+....++.|.+...++|+|+||||+||||++|+++|+++|++|++++|......+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~ 160 (442)
T PLN02206 81 RPDESYVPAIQAQRKPSLEYLNRIGNSGGKIPLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENV 160 (442)
T ss_pred cccccccccccceecccccccccccccCCcCccccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhh
Confidence 000000 0000000 011123357788888889999999999999999999999999999999987654444443
Q ss_pred hhhcCCCceEEEEccccccccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCC
Q 024766 158 VHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237 (263)
Q Consensus 158 ~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~ 237 (263)
...+...+++++.+|+.++.+.++|+|||+|+...+.....++.+.+++|+.|+.+++++|++.++++|++||..+||..
T Consensus 161 ~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~ 240 (442)
T PLN02206 161 MHHFSNPNFELIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 240 (442)
T ss_pred hhhccCCceEEEECCccChhhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCC
Confidence 33344567899999999998889999999998766555556788999999999999999999988899999999999988
Q ss_pred CCCCcCCCCCCCCCCCCcCccccccC
Q 024766 238 LEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 238 ~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
...+.+|++|...+|..+.+.|+.+|
T Consensus 241 ~~~p~~E~~~~~~~P~~~~s~Y~~SK 266 (442)
T PLN02206 241 LQHPQVETYWGNVNPIGVRSCYDEGK 266 (442)
T ss_pred CCCCCCccccccCCCCCccchHHHHH
Confidence 77789999887778888889999887
No 3
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.95 E-value=7.2e-28 Score=207.93 Aligned_cols=150 Identities=75% Similarity=1.193 Sum_probs=144.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASP 193 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~~ 193 (263)
..+++|+||||+||||++|+++|..+|++|+++|.-.++..+++........++++..|+..+.+.++|.|||.|++.++
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapasp 104 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPASP 104 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCCC
Confidence 35589999999999999999999999999999999999999988888889999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
.++..++.+++.+|+.|+.+++.+|++.++||++.||+.|||++..+|+.|++|++++|+.+++||...|
T Consensus 105 ~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegK 174 (350)
T KOG1429|consen 105 PHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGK 174 (350)
T ss_pred cccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998765
No 4
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=1e-24 Score=190.51 Aligned_cols=138 Identities=36% Similarity=0.636 Sum_probs=124.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccccc-------CCCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL-------LEVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~-------~~iD~Vi~~Ag 189 (263)
++||||||+|+||++++.+|++.|++|+++|+......+.+... .+.++.+|+.|..+ .++|.|||+||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa 76 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFAA 76 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence 47999999999999999999999999999999877766655433 27899999998733 36999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
......+.++|.+.++.|+.||.+|+++|++.++ +|||-||++|||.+...|+.|+ .|+.|.+.||.||
T Consensus 77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~-----~~~~p~NPYG~sK 146 (329)
T COG1087 77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISET-----SPLAPINPYGRSK 146 (329)
T ss_pred ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCC-----CCCCCCCcchhHH
Confidence 9888888899999999999999999999999998 9999999999999999999999 5888999999997
No 5
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.89 E-value=2.2e-22 Score=183.80 Aligned_cols=148 Identities=30% Similarity=0.360 Sum_probs=116.5
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc------CCCceEEEEcccccc-----ccC
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF------RNPRFELIRHDVVEP-----ILL 179 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~------~~~~v~~~~~Dv~~~-----~~~ 179 (263)
+..+++|+|+||||+||||++|+++|+++|++|++++|............. ...++.++.+|+.|. .+.
T Consensus 10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~ 89 (348)
T PRK15181 10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK 89 (348)
T ss_pred cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence 345678999999999999999999999999999999986543322221111 123578899999875 256
Q ss_pred CCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCcc
Q 024766 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLA 258 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~ 258 (263)
++|+|||+|+.........++...+++|+.|+.+++++|++.++ +||++||.++||...+.+..|+. +..|.+.
T Consensus 90 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~-----~~~p~~~ 164 (348)
T PRK15181 90 NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEER-----IGRPLSP 164 (348)
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCC-----CCCCCCh
Confidence 79999999987655445567788899999999999999999987 99999999999976566666763 4556678
Q ss_pred ccccC
Q 024766 259 ATAVV 263 (263)
Q Consensus 259 Y~~sK 263 (263)
|+.||
T Consensus 165 Y~~sK 169 (348)
T PRK15181 165 YAVTK 169 (348)
T ss_pred hhHHH
Confidence 99887
No 6
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=4.9e-21 Score=166.87 Aligned_cols=142 Identities=31% Similarity=0.487 Sum_probs=121.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCC-ccchhhhhhhcCCCceEEEEcccccccc-----C--CCcEEEE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFF-TGRKDNLVHHFRNPRFELIRHDVVEPIL-----L--EVDQIYH 186 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~-----~--~iD~Vi~ 186 (263)
|++|||||+||||+..++.++++.. +|++++... .+..+.+....+.+++.++.+|+.|... . ++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 5799999999999999999999865 578887652 3355666667678899999999998733 2 5999999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCcceecCCCC--CCcCCCCCCCCCCCCcCcccccc
Q 024766 187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLE--HPQKETYWGNVNPIGELLAATAV 262 (263)
Q Consensus 187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS~~vyg~~~~--~~~~E~~~~~~~p~~~~~~Y~~s 262 (263)
.|+-.+..++-..|...+++|+.||.+|++++++... ||++|||..|||.-.. ..++|+ +|+.|.+.|.+|
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~-----tp~~PsSPYSAS 155 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTET-----TPYNPSSPYSAS 155 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccC-----CCCCCCCCcchh
Confidence 9998887778888999999999999999999999874 9999999999997433 368888 699999999999
Q ss_pred C
Q 024766 263 V 263 (263)
Q Consensus 263 K 263 (263)
|
T Consensus 156 K 156 (340)
T COG1088 156 K 156 (340)
T ss_pred h
Confidence 8
No 7
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.85 E-value=5.8e-21 Score=173.80 Aligned_cols=142 Identities=28% Similarity=0.337 Sum_probs=110.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccc-hhhhhhhc------CCCceEEEEccccccc-----cC--CCc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR-KDNLVHHF------RNPRFELIRHDVVEPI-----LL--EVD 182 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~~~~~------~~~~v~~~~~Dv~~~~-----~~--~iD 182 (263)
|+|+||||+||||++|+++|+++|++|++++|+.+.. .+...... ....+.++.+|++|.. +. ++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999875421 11111111 1245889999998862 22 479
Q ss_pred EEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC----eEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCcc
Q 024766 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA----KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLA 258 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~----~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~ 258 (263)
+|||+|+.........++...+++|+.|+.+++++|++.+. ++|++||.++||.....+.+|+ .|..|.+.
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~ 155 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-----TPFYPRSP 155 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-----CCCCCCCh
Confidence 99999987554334445678889999999999999988762 7999999999997666677887 46778889
Q ss_pred ccccC
Q 024766 259 ATAVV 263 (263)
Q Consensus 259 Y~~sK 263 (263)
|++||
T Consensus 156 Y~~sK 160 (343)
T TIGR01472 156 YAAAK 160 (343)
T ss_pred hHHHH
Confidence 99987
No 8
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.85 E-value=7.8e-21 Score=170.21 Aligned_cols=125 Identities=23% Similarity=0.203 Sum_probs=104.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccC--CCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~--~iD~Vi~~Ag 189 (263)
|+||||||+||||++++++|+++| +|++++|... .+.+|++|. .+. ++|+|||+|+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 63 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKIRPDVIVNAAA 63 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 479999999999999999999999 7988887421 234577665 223 5899999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
.......+.+++..+.+|+.|+.+++++|++.++++|++||..|||.....|++|+ +|..|.+.||.||
T Consensus 64 ~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~-----~~~~P~~~Yg~sK 132 (299)
T PRK09987 64 HTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQET-----DATAPLNVYGETK 132 (299)
T ss_pred cCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCC-----CCCCCCCHHHHHH
Confidence 87655566678888999999999999999999889999999999998777789998 4667788899887
No 9
>PLN02214 cinnamoyl-CoA reductase
Probab=99.84 E-value=2.1e-20 Score=170.46 Aligned_cols=145 Identities=21% Similarity=0.285 Sum_probs=112.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhh-hhhhcC-CCceEEEEcccccc-----ccCCCcEEEE
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN-LVHHFR-NPRFELIRHDVVEP-----ILLEVDQIYH 186 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~-~~~~~~-~~~v~~~~~Dv~~~-----~~~~iD~Vi~ 186 (263)
+++|+|+||||+||||++++++|+++|++|++++|+.+..... ...... ..+++++.+|+.+. .+.++|+|||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 4678999999999999999999999999999999875432211 111111 23578889999875 3457999999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCc-ceecCCCC---CCcCCCCCCCCC-CCCcCcccc
Q 024766 187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTS-EVYGDPLE---HPQKETYWGNVN-PIGELLAAT 260 (263)
Q Consensus 187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~-~vyg~~~~---~~~~E~~~~~~~-p~~~~~~Y~ 260 (263)
+|+.. ..++...+++|+.|+.+++++|++.+. +||++||. ++||.+.. .+++|++|.+.+ +..+.+.|+
T Consensus 88 ~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~ 162 (342)
T PLN02214 88 TASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYC 162 (342)
T ss_pred ecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHH
Confidence 99753 246788899999999999999999886 89999996 68985432 357898775433 556778899
Q ss_pred ccC
Q 024766 261 AVV 263 (263)
Q Consensus 261 ~sK 263 (263)
.||
T Consensus 163 ~sK 165 (342)
T PLN02214 163 YGK 165 (342)
T ss_pred HHH
Confidence 987
No 10
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.84 E-value=9.8e-21 Score=166.98 Aligned_cols=143 Identities=27% Similarity=0.416 Sum_probs=124.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc----CCCceEEEEcccccccc-------CCCcEE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF----RNPRFELIRHDVVEPIL-------LEVDQI 184 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~----~~~~v~~~~~Dv~~~~~-------~~iD~V 184 (263)
+++||||||+||||++++-+|+++|+.|+++|+......+.+.... ....+.+..+|+.|... .++|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 5799999999999999999999999999999988776655543332 24789999999999733 359999
Q ss_pred EEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCCCCC-cCcccccc
Q 024766 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG-ELLAATAV 262 (263)
Q Consensus 185 i~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~-~~~~Y~~s 262 (263)
+|.|+........+++......|+.|+.++++.+++++. .+|+.||++|||.+..-|++|.. |.. |.+.||.+
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~-----~t~~p~~pyg~t 156 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEED-----PTDQPTNPYGKT 156 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcC-----CCCCCCCcchhh
Confidence 999998887777888899999999999999999999997 89999999999999999999994 555 88888887
Q ss_pred C
Q 024766 263 V 263 (263)
Q Consensus 263 K 263 (263)
|
T Consensus 157 K 157 (343)
T KOG1371|consen 157 K 157 (343)
T ss_pred h
Confidence 6
No 11
>PLN02427 UDP-apiose/xylose synthase
Probab=99.84 E-value=2.6e-20 Score=172.29 Aligned_cols=133 Identities=25% Similarity=0.407 Sum_probs=101.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecCCccchhhhhhh--cCCCceEEEEcccccc-----ccCCCcEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP-----ILLEVDQI 184 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~--~~~~~v~~~~~Dv~~~-----~~~~iD~V 184 (263)
..+.|+|+||||+||||++|+++|+++ |++|++++|+........... ....+++++.+|+.|. .+.++|+|
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V 90 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT 90 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence 456679999999999999999999998 589999988644322111110 0124688999999875 34579999
Q ss_pred EEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCC
Q 024766 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKET 245 (263)
Q Consensus 185 i~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~ 245 (263)
||+|+...+..+..++.+.+..|+.|+.+++++|++.+.+||++||.++||...+.+..|+
T Consensus 91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~ 151 (386)
T PLN02427 91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD 151 (386)
T ss_pred EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcc
Confidence 9999876554444566777889999999999999888789999999999997544444444
No 12
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.84 E-value=1.9e-20 Score=170.14 Aligned_cols=145 Identities=26% Similarity=0.311 Sum_probs=112.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccch-hhhhhhc-----CCCceEEEEccccccc-----cC--
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHF-----RNPRFELIRHDVVEPI-----LL-- 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~~-----~~~~v~~~~~Dv~~~~-----~~-- 179 (263)
+.++|+|+||||+||||++++++|+++|++|++++|...... +.+.... ....+.++.+|++|.. +.
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 346789999999999999999999999999999988654211 1111111 1245888999998762 22
Q ss_pred CCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC------eEEEEcCcceecCCCCCCcCCCCCCCCCCC
Q 024766 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA------KFLLTSTSEVYGDPLEHPQKETYWGNVNPI 253 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~------~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~ 253 (263)
++|+||||||.........++...+++|+.|+.++++++++.+. +||++||.++||.... +++|+ .|.
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~-----~~~ 156 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSET-----TPF 156 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCC-----CCC
Confidence 47999999987554444456788889999999999999988763 7999999999997654 77887 477
Q ss_pred CcCccccccC
Q 024766 254 GELLAATAVV 263 (263)
Q Consensus 254 ~~~~~Y~~sK 263 (263)
.+.+.|+.||
T Consensus 157 ~p~~~Y~~sK 166 (340)
T PLN02653 157 HPRSPYAVAK 166 (340)
T ss_pred CCCChhHHHH
Confidence 7888999987
No 13
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.84 E-value=5.1e-20 Score=168.09 Aligned_cols=145 Identities=23% Similarity=0.287 Sum_probs=111.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc-----cC--CCcEEEE
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----LL--EVDQIYH 186 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~-----~~--~iD~Vi~ 186 (263)
.++|+|+||||+||||++++++|+++|++|++++|+...............++..+.+|+++.. +. ++|+|||
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 4678999999999999999999999999999999876543322111111235778899998763 22 4799999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCcceecCCC-CCCcCCCCCCCCCCCCcCccccccC
Q 024766 187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPL-EHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-~iV~vSS~~vyg~~~-~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
+||.........++...+++|+.|+.++++++++.+ . +||++||.++||... ..++.|+ .|..+.+.|+.||
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~-----~~~~p~~~Y~~sK 156 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRET-----DPLGGHDPYSSSK 156 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccC-----CCCCCCCcchhHH
Confidence 998654434455788899999999999999998876 4 899999999998643 2356676 4666788899887
No 14
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.83 E-value=3.8e-20 Score=168.66 Aligned_cols=144 Identities=22% Similarity=0.331 Sum_probs=111.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecCCccchhhhhhhcCCCceEEEEcccc-cc-----ccCCCcEEEEcc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV-EP-----ILLEVDQIYHLA 188 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~-~~-----~~~~iD~Vi~~A 188 (263)
+|+|+||||+||||++|+++|+++ |++|++++|+... .........++++.+|+. +. .+.++|+|||+|
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a 76 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR----LGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLV 76 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH----HHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence 468999999999999999999986 6999999875322 122223346889999997 42 345799999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCCCCCC-CCCC-CcCccccccC
Q 024766 189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGN-VNPI-GELLAATAVV 263 (263)
Q Consensus 189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~~~~~-~~p~-~~~~~Y~~sK 263 (263)
+...+.....++...+++|+.|+.+++++|++.+.++|++||.++||...+.+.+|++.+. ..|. .+.+.|+.||
T Consensus 77 a~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK 153 (347)
T PRK11908 77 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSK 153 (347)
T ss_pred ccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHH
Confidence 8766555566788899999999999999999888899999999999976556677765321 1222 4566899887
No 15
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.83 E-value=7.2e-20 Score=180.40 Aligned_cols=148 Identities=24% Similarity=0.408 Sum_probs=117.2
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------ccCCCcEE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQI 184 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------~~~~iD~V 184 (263)
...++|+|+||||+||||++|+++|+++ |++|++++|....... .....+++++.+|++|. .+.++|+|
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~V 386 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLGHPRFHFVEGDISIHSEWIEYHIKKCDVV 386 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcCCCceEEEeccccCcHHHHHHHhcCCCEE
Confidence 3457889999999999999999999986 7999999986543211 12234688899999863 24579999
Q ss_pred EEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCCCCC-CCCCC-CcCcccccc
Q 024766 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWG-NVNPI-GELLAATAV 262 (263)
Q Consensus 185 i~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~~~~-~~~p~-~~~~~Y~~s 262 (263)
||+||...+.....++...+++|+.|+.+++++|++.+.+||++||.++||...+.+++|+++. +..|. .+.+.|+.|
T Consensus 387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~s 466 (660)
T PRK08125 387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVS 466 (660)
T ss_pred EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHH
Confidence 9999976655556678889999999999999999998889999999999997666678888643 12343 356789998
Q ss_pred C
Q 024766 263 V 263 (263)
Q Consensus 263 K 263 (263)
|
T Consensus 467 K 467 (660)
T PRK08125 467 K 467 (660)
T ss_pred H
Confidence 7
No 16
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.82 E-value=6.5e-20 Score=163.08 Aligned_cols=138 Identities=34% Similarity=0.465 Sum_probs=103.6
Q ss_pred EEEcCCChHHHHHHHHHHhCC--CeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccCCCC
Q 024766 120 VVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPAS 192 (263)
Q Consensus 120 lVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag~~~ 192 (263)
|||||+||||++|+++|+++| ++|.++++........ ........+++.+|++|+ .+.++|+|||+|++..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~ 78 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP 78 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence 699999999999999999999 6899988765543211 111222334899999886 5678999999997654
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecC-CCCCCc---CCCCCCCCCCCCcCccccccC
Q 024766 193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGD-PLEHPQ---KETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~-~~~~~~---~E~~~~~~~p~~~~~~Y~~sK 263 (263)
... ....+..+++|+.||.|++++|++.++ ++||+||.+++++ ..+.++ +|+.+ .|......|+.||
T Consensus 79 ~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~---~~~~~~~~Y~~SK 150 (280)
T PF01073_consen 79 PWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTP---YPSSPLDPYAESK 150 (280)
T ss_pred ccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCc---ccccccCchHHHH
Confidence 322 456788999999999999999999997 9999999999885 222333 44432 2344677898887
No 17
>PLN02240 UDP-glucose 4-epimerase
Probab=99.82 E-value=1.1e-19 Score=165.55 Aligned_cols=145 Identities=27% Similarity=0.404 Sum_probs=113.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchh---hhhhhc--CCCceEEEEccccccc-----c--CCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD---NLVHHF--RNPRFELIRHDVVEPI-----L--LEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~---~~~~~~--~~~~v~~~~~Dv~~~~-----~--~~i 181 (263)
+++|+|+||||+||||++|+++|+++|++|++++|....... ...... ...++.++.+|+.++. + .++
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 82 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF 82 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence 567899999999999999999999999999999875432211 111111 1245788999998762 2 268
Q ss_pred cEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCcccc
Q 024766 182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAAT 260 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~ 260 (263)
|+|||+|+.........++...+++|+.++.++++++++.+. +||++||.++||...+.+++|+ .|..+.+.|+
T Consensus 83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~~~~~~Y~ 157 (352)
T PLN02240 83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-----FPLSATNPYG 157 (352)
T ss_pred CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCCCCCCHHH
Confidence 999999986543334457888999999999999999998875 8999999999997777788888 4667778899
Q ss_pred ccC
Q 024766 261 AVV 263 (263)
Q Consensus 261 ~sK 263 (263)
.||
T Consensus 158 ~sK 160 (352)
T PLN02240 158 RTK 160 (352)
T ss_pred HHH
Confidence 886
No 18
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.82 E-value=2.4e-19 Score=168.92 Aligned_cols=152 Identities=24% Similarity=0.271 Sum_probs=108.1
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccch----------------hhhhh--hcCCCceEEEEcc
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK----------------DNLVH--HFRNPRFELIRHD 172 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~----------------~~~~~--~~~~~~v~~~~~D 172 (263)
...+++|+|+||||+||||++|+++|+++|++|+++++...... +.+.. .....+++++.+|
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 121 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD 121 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence 34578899999999999999999999999999999875422110 00100 0112368899999
Q ss_pred ccccc-----cC--CCcEEEEccCCCCCCCCCCC---HHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCcceecCCCCC
Q 024766 173 VVEPI-----LL--EVDQIYHLACPASPVHYKYN---PVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEH 240 (263)
Q Consensus 173 v~~~~-----~~--~iD~Vi~~Ag~~~~~~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS~~vyg~~~~~ 240 (263)
+.|.. +. ++|+|||+|+.........+ ++..+++|+.|+.+++++|++.++ +||++||.++||... .
T Consensus 122 l~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~ 200 (442)
T PLN02572 122 ICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-I 200 (442)
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-C
Confidence 98863 22 58999999976433222222 356679999999999999998874 799999999999643 2
Q ss_pred CcCCCCCC---------CCCCCCcCccccccC
Q 024766 241 PQKETYWG---------NVNPIGELLAATAVV 263 (263)
Q Consensus 241 ~~~E~~~~---------~~~p~~~~~~Y~~sK 263 (263)
+..|.... ...|..|.+.||.||
T Consensus 201 ~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK 232 (442)
T PLN02572 201 DIEEGYITITHNGRTDTLPYPKQASSFYHLSK 232 (442)
T ss_pred CCcccccccccccccccccCCCCCCCcchhHH
Confidence 34443210 113667788999987
No 19
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.81 E-value=3e-19 Score=163.26 Aligned_cols=149 Identities=21% Similarity=0.199 Sum_probs=106.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLAC 189 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag 189 (263)
.+++|+||||+||||++++++|+++|++|++++|+...............++.++.+|+.+. .+.++|+|||+|+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~ 88 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA 88 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence 45699999999999999999999999999999886543322222221235688899999875 3457999999998
Q ss_pred CCCCCC--CCCCHHH-----HHHHHHHHHHHHHHHHHHcC-C-eEEEEcCcceecCCC-----CCCcCCCCCCCCC----
Q 024766 190 PASPVH--YKYNPVK-----TIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPL-----EHPQKETYWGNVN---- 251 (263)
Q Consensus 190 ~~~~~~--~~~~~~~-----~~~~Nv~gt~~ll~~a~~~~-~-~iV~vSS~~vyg~~~-----~~~~~E~~~~~~~---- 251 (263)
...... ...++.. .+++|+.|+.+++++|++.+ . +||++||.++||... ..+++|+.+.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~ 168 (353)
T PLN02896 89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWN 168 (353)
T ss_pred cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhc
Confidence 754322 2223433 45666799999999998775 4 999999999998532 1356776433221
Q ss_pred CCCcCccccccC
Q 024766 252 PIGELLAATAVV 263 (263)
Q Consensus 252 p~~~~~~Y~~sK 263 (263)
+..+.+.||.||
T Consensus 169 ~~~~~~~Y~~sK 180 (353)
T PLN02896 169 TKASGWVYVLSK 180 (353)
T ss_pred cCCCCccHHHHH
Confidence 233556899987
No 20
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.81 E-value=1.3e-19 Score=170.16 Aligned_cols=137 Identities=30% Similarity=0.390 Sum_probs=114.9
Q ss_pred ccccccCcccCCCCcccc-------CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhh---hhhhcCCC
Q 024766 96 HRTSSFGAKTGRVPVGIG-------RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN---LVHHFRNP 164 (263)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~-------~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~---~~~~~~~~ 164 (263)
.+..++.+..+|.|+..+ +.||+|+||||+|.||+++++++++.+. +++++++++.+.... +.+.+...
T Consensus 223 lreI~ieDLLgR~pV~~d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~ 302 (588)
T COG1086 223 LREIEIEDLLGRPPVALDTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPEL 302 (588)
T ss_pred cccCCHHHHhCCCCCCCCHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCc
Confidence 455666788888877554 6999999999999999999999999988 777888876654332 23333457
Q ss_pred ceEEEEccccccc-----cCC--CcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcc
Q 024766 165 RFELIRHDVVEPI-----LLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSE 232 (263)
Q Consensus 165 ~v~~~~~Dv~~~~-----~~~--iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~ 232 (263)
++..+.+|+.|.. +.+ +|+|||.|+..+.+..+.+|.+.+.+|+.||.|++++|.+.++ ++|++||..
T Consensus 303 ~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK 378 (588)
T COG1086 303 KLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK 378 (588)
T ss_pred ceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc
Confidence 8999999999873 344 9999999999998889999999999999999999999999998 999999974
No 21
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.81 E-value=4.5e-19 Score=159.91 Aligned_cols=148 Identities=22% Similarity=0.287 Sum_probs=108.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc----CCCceEEEEccccccc-----cCCCcEEE
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF----RNPRFELIRHDVVEPI-----LLEVDQIY 185 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~----~~~~v~~~~~Dv~~~~-----~~~iD~Vi 185 (263)
.+|+++||||+||||++++++|+++|++|+++.|+....... .... ...++.++.+|+++.. +.++|+||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKT-DHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhH-HHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 367999999999999999999999999999888875543221 1111 1246888999998763 45799999
Q ss_pred EccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCcceecCCC-----CCCcCCCCCCCCC-CCCcCc
Q 024766 186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVYGDPL-----EHPQKETYWGNVN-PIGELL 257 (263)
Q Consensus 186 ~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-~iV~vSS~~vyg~~~-----~~~~~E~~~~~~~-p~~~~~ 257 (263)
||||........+++.+.+++|+.|+.++++++.+. +. +||++||.++|+.+. ..+++|+++..+. +..+.+
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 162 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ 162 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence 999864332223456788999999999999999875 34 899999988775432 3467888643221 122346
Q ss_pred cccccC
Q 024766 258 AATAVV 263 (263)
Q Consensus 258 ~Y~~sK 263 (263)
.|+.||
T Consensus 163 ~Y~~sK 168 (325)
T PLN02989 163 WYVLSK 168 (325)
T ss_pred chHHHH
Confidence 799887
No 22
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.81 E-value=5.7e-19 Score=160.32 Aligned_cols=148 Identities=20% Similarity=0.277 Sum_probs=107.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhh--hhhhcCCCceEEEEccccccc-----cCCCcEEEE
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--LVHHFRNPRFELIRHDVVEPI-----LLEVDQIYH 186 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~--~~~~~~~~~v~~~~~Dv~~~~-----~~~iD~Vi~ 186 (263)
.++++|+||||+||||++|+++|+++|++|+++.|+....... ........++.++.+|++|+. +.++|+|||
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 4578999999999999999999999999999888865432211 111111235888999998763 457999999
Q ss_pred ccCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCcceecCC----CCCCcCCCCCCCC----CCCCc
Q 024766 187 LACPASPVHYKYNP-VKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVYGDP----LEHPQKETYWGNV----NPIGE 255 (263)
Q Consensus 187 ~Ag~~~~~~~~~~~-~~~~~~Nv~gt~~ll~~a~~~-~~-~iV~vSS~~vyg~~----~~~~~~E~~~~~~----~p~~~ 255 (263)
+|+... ....++ ...+++|+.|+.++++++.+. +. +||++||.++||.. .+.+.+|..|... .+..+
T Consensus 87 ~A~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p 164 (338)
T PLN00198 87 VATPVN--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP 164 (338)
T ss_pred eCCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence 998532 112333 356799999999999999876 34 99999999999853 2346677754321 23456
Q ss_pred CccccccC
Q 024766 256 LLAATAVV 263 (263)
Q Consensus 256 ~~~Y~~sK 263 (263)
.+.|+.||
T Consensus 165 ~~~Y~~sK 172 (338)
T PLN00198 165 TWGYPASK 172 (338)
T ss_pred cchhHHHH
Confidence 77899887
No 23
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.80 E-value=9.8e-19 Score=158.31 Aligned_cols=142 Identities=24% Similarity=0.467 Sum_probs=109.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhh--hcCCCceEEEEccccccc-----cC--CCcEEEEc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH--HFRNPRFELIRHDVVEPI-----LL--EVDQIYHL 187 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~v~~~~~Dv~~~~-----~~--~iD~Vi~~ 187 (263)
|+|+||||+||||++++++|+++|++|++++|........... .....++.++.+|+.|.. +. ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 4799999999999999999999999999987653332221111 112345677889998763 22 58999999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCCCC-CcCccccccC
Q 024766 188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI-GELLAATAVV 263 (263)
Q Consensus 188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~-~~~~~Y~~sK 263 (263)
|+..........+.+.+++|+.++.++++++++.+. +||++||.++||.....+++|++ |. .+.+.|+.+|
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~-----~~~~p~~~Y~~sK 153 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSK 153 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCcccccc-----CCCCCCChhHHHH
Confidence 986543333445678899999999999999999886 89999999999977677888884 43 4677898876
No 24
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.79 E-value=8.7e-19 Score=159.93 Aligned_cols=143 Identities=30% Similarity=0.432 Sum_probs=104.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEE-EecCCccc-hhhhhhhcCCCceEEEEccccccc-----cC--CCcEEEE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIV-IDNFFTGR-KDNLVHHFRNPRFELIRHDVVEPI-----LL--EVDQIYH 186 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~-l~r~~~~~-~~~~~~~~~~~~v~~~~~Dv~~~~-----~~--~iD~Vi~ 186 (263)
+|+|+||||+||||++++++|+++|++|++ +++..... ...........++.++.+|+.|.. +. ++|+|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 468999999999999999999999987554 44432211 111111112246778899998752 22 4899999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEcCcceecCCC--CCCcCCCCCCCCCCCC
Q 024766 187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---------GA-KFLLTSTSEVYGDPL--EHPQKETYWGNVNPIG 254 (263)
Q Consensus 187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---------~~-~iV~vSS~~vyg~~~--~~~~~E~~~~~~~p~~ 254 (263)
|||........+++...+++|+.|+.+++++|.+. +. ++|++||.++||... ..+++|+ .|..
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~-----~~~~ 155 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET-----TPYA 155 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC-----CCCC
Confidence 99875443334567889999999999999999762 33 899999999999542 3467887 4666
Q ss_pred cCccccccC
Q 024766 255 ELLAATAVV 263 (263)
Q Consensus 255 ~~~~Y~~sK 263 (263)
+.+.|+.||
T Consensus 156 p~s~Y~~sK 164 (355)
T PRK10217 156 PSSPYSASK 164 (355)
T ss_pred CCChhHHHH
Confidence 778899887
No 25
>PLN02650 dihydroflavonol-4-reductase
Probab=99.79 E-value=1e-18 Score=159.58 Aligned_cols=147 Identities=22% Similarity=0.319 Sum_probs=105.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcC----CCceEEEEcccccc-----ccCCCcEEE
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR----NPRFELIRHDVVEP-----ILLEVDQIY 185 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~-----~~~~iD~Vi 185 (263)
..|+||||||+||||++++++|+++|++|++++|+....... ..... ..++.++.+|+.+. .+.++|+||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV-KHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH-HHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 356899999999999999999999999999998875433221 11111 13578889999875 345799999
Q ss_pred EccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCcceecCC-CCCC-cCCCCCCCCC----CCCcCc
Q 024766 186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDP-LEHP-QKETYWGNVN----PIGELL 257 (263)
Q Consensus 186 ~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-~iV~vSS~~vyg~~-~~~~-~~E~~~~~~~----p~~~~~ 257 (263)
|+|+.... .........+++|+.|+.+++++|++.+ . +||++||.++|+.. ...+ ++|++|...+ +..+.+
T Consensus 83 H~A~~~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 161 (351)
T PLN02650 83 HVATPMDF-ESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW 161 (351)
T ss_pred EeCCCCCC-CCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence 99985431 1122235788999999999999999876 4 89999999777643 2233 5787653321 223456
Q ss_pred cccccC
Q 024766 258 AATAVV 263 (263)
Q Consensus 258 ~Y~~sK 263 (263)
.|+.||
T Consensus 162 ~Y~~sK 167 (351)
T PLN02650 162 MYFVSK 167 (351)
T ss_pred hHHHHH
Confidence 899887
No 26
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.79 E-value=9.4e-19 Score=149.62 Aligned_cols=118 Identities=15% Similarity=0.046 Sum_probs=95.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------------ccCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------------~~~~i 181 (263)
.++|.++||||+++||.+++++|++.|++|+++.|+.+..++...++ ....+.....|++|. .+.++
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~-~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEI-GAGAALALALDVTDRAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhh-ccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence 45689999999999999999999999999999999877666655554 336788999999987 23569
Q ss_pred cEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCcc
Q 024766 182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSE 232 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~ 232 (263)
|++|||||..-..+. .++|+.++++|+.|.++..++. .+.+ .+||++||.+
T Consensus 83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA 142 (246)
T COG4221 83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA 142 (246)
T ss_pred cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc
Confidence 999999997544332 2368899999999999988875 3333 3999999964
No 27
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.79 E-value=1.4e-18 Score=156.73 Aligned_cols=147 Identities=24% Similarity=0.322 Sum_probs=106.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc----CCCceEEEEccccccc-----cCCCcEEE
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF----RNPRFELIRHDVVEPI-----LLEVDQIY 185 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~----~~~~v~~~~~Dv~~~~-----~~~iD~Vi 185 (263)
.+|+|+||||+||||++++++|+++|++|+++.|+...... ..... ...+++++.+|+++.. +.++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKK-TEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHH-HHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 46899999999999999999999999999988887554221 11111 1246888999998763 45799999
Q ss_pred EccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCccee--cCC---CCCCcCCCCCCCCC-CCCcCc
Q 024766 186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVY--GDP---LEHPQKETYWGNVN-PIGELL 257 (263)
Q Consensus 186 ~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-~iV~vSS~~vy--g~~---~~~~~~E~~~~~~~-p~~~~~ 257 (263)
|+|+.... ...+...+.+++|+.|+.+++++|++. ++ +||++||.++| +.+ .+.+++|++|..+. +..+.+
T Consensus 83 h~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 161 (322)
T PLN02986 83 HTASPVFF-TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN 161 (322)
T ss_pred EeCCCcCC-CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence 99986422 122233457899999999999999885 55 99999998754 432 23467888764321 123557
Q ss_pred cccccC
Q 024766 258 AATAVV 263 (263)
Q Consensus 258 ~Y~~sK 263 (263)
.|++||
T Consensus 162 ~Y~~sK 167 (322)
T PLN02986 162 WYPLSK 167 (322)
T ss_pred chHHHH
Confidence 899887
No 28
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.78 E-value=1.7e-18 Score=155.59 Aligned_cols=146 Identities=23% Similarity=0.321 Sum_probs=103.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc----CCCceEEEEcccccc-----ccCCCcEEE
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF----RNPRFELIRHDVVEP-----ILLEVDQIY 185 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~----~~~~v~~~~~Dv~~~-----~~~~iD~Vi 185 (263)
++|+|+||||+||||++++++|+++|++|++++|+...... ..... ...+++++.+|+.++ .+.++|+||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKK-TEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhh-HHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 36799999999999999999999999999999887543211 11111 124688899999875 356799999
Q ss_pred EccCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCcc--eecCC---CCCCcCCCCCCCCC-CCCcC
Q 024766 186 HLACPASPVHYKYNP-VKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSE--VYGDP---LEHPQKETYWGNVN-PIGEL 256 (263)
Q Consensus 186 ~~Ag~~~~~~~~~~~-~~~~~~Nv~gt~~ll~~a~~~-~~-~iV~vSS~~--vyg~~---~~~~~~E~~~~~~~-p~~~~ 256 (263)
|+|+.... ...++ ...+++|+.|+.++++++++. ++ +||++||.+ +|+.. .+.+++|+.+..+. +....
T Consensus 82 h~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~ 159 (322)
T PLN02662 82 HTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESK 159 (322)
T ss_pred EeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhccc
Confidence 99986431 22344 478899999999999999887 65 999999976 46532 23457777432110 11223
Q ss_pred ccccccC
Q 024766 257 LAATAVV 263 (263)
Q Consensus 257 ~~Y~~sK 263 (263)
+.|+.||
T Consensus 160 ~~Y~~sK 166 (322)
T PLN02662 160 LWYVLSK 166 (322)
T ss_pred chHHHHH
Confidence 5788776
No 29
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.78 E-value=1.9e-18 Score=154.19 Aligned_cols=135 Identities=24% Similarity=0.334 Sum_probs=104.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchh--hhhhhc-CCCceEEEEcccccc-----ccCCCcEEEE
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD--NLVHHF-RNPRFELIRHDVVEP-----ILLEVDQIYH 186 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~--~~~~~~-~~~~v~~~~~Dv~~~-----~~~~iD~Vi~ 186 (263)
.+++|+||||+||||++++++|+++||.|++..|++++.+. .+.+.. ...+..++.+|+.|. .+.++|.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 57899999999999999999999999999999999877332 122222 134588999999876 5678999999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCcce-ecC----CCCCCcCCCCCCCC
Q 024766 187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEV-YGD----PLEHPQKETYWGNV 250 (263)
Q Consensus 187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-~iV~vSS~~v-yg~----~~~~~~~E~~~~~~ 250 (263)
.|.+....... ...+.++.++.||.|++++|++.. + |||++||.++ ... ..+.+++|+.|.+.
T Consensus 85 ~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~ 154 (327)
T KOG1502|consen 85 TASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDL 154 (327)
T ss_pred eCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcH
Confidence 99654432222 345789999999999999999998 4 9999999654 332 34568899988543
No 30
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.78 E-value=1.9e-18 Score=152.01 Aligned_cols=125 Identities=25% Similarity=0.283 Sum_probs=105.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccccc--CCCcEEEEccCCCCCCC
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL--LEVDQIYHLACPASPVH 195 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~--~~iD~Vi~~Ag~~~~~~ 195 (263)
++||||++|.+|.+|++.|. .+.+|+.+++.. +++.+.|-..+.+ .++|+|||+|+......
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~ 65 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVDK 65 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECcccccccc
Confidence 49999999999999999999 667999987642 2222223222222 25899999999988878
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 196 YKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 196 ~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
.+.+++..+.+|..|+.|++++|++.|.++|++||..||....+.+|.|+ ++.+|.+.||.||
T Consensus 66 aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~-----D~~~P~nvYG~sK 128 (281)
T COG1091 66 AESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKET-----DTPNPLNVYGRSK 128 (281)
T ss_pred ccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCC-----CCCCChhhhhHHH
Confidence 88889999999999999999999999999999999999998888899999 5788888999998
No 31
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.77 E-value=3.5e-18 Score=157.55 Aligned_cols=141 Identities=24% Similarity=0.293 Sum_probs=105.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLAC 189 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag 189 (263)
++|+|+||||+||||++++++|.++|++|++++|........ .....+++.+|+.+. .+.++|+|||+|+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-----DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-----ccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 568999999999999999999999999999999854321110 011246778888764 3457999999998
Q ss_pred CCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCC----CCcCCCCCCCCCCCCcCccccccC
Q 024766 190 PASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLE----HPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 190 ~~~~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~----~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
....... ..++...+..|+.++.+++++|++.++ +||++||.++||.... .++.|++ ..|..+.+.|+.+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~---~~p~~p~s~Yg~sK 171 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESD---AWPAEPQDAYGLEK 171 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCccc---CCCCCCCCHHHHHH
Confidence 6543222 234566788999999999999999886 9999999999996532 2355553 13667788999887
No 32
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.77 E-value=4.6e-18 Score=167.84 Aligned_cols=146 Identities=27% Similarity=0.393 Sum_probs=109.0
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhC--CCeEEEEecCCc-cchhhhhhhcCCCceEEEEccccccc-------cCCCc
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNFFT-GRKDNLVHHFRNPRFELIRHDVVEPI-------LLEVD 182 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~-~~~~~~~~~~~~~~v~~~~~Dv~~~~-------~~~iD 182 (263)
..++|+|+||||+||||++|+++|+++ |++|+++++... .....+.......+++++.+|+.|.. ..++|
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D 82 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGID 82 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCC
Confidence 356789999999999999999999998 678998887421 11111111112356889999998752 14699
Q ss_pred EEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCcceecCCCCCC---cCCCCCCCCCCCCcCc
Q 024766 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLEHP---QKETYWGNVNPIGELL 257 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-~iV~vSS~~vyg~~~~~~---~~E~~~~~~~p~~~~~ 257 (263)
+|||+|+.........++.+.+++|+.|+.++++++++.+ . +||++||.++||.....+ ..|+ .|..|.+
T Consensus 83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~-----~~~~p~~ 157 (668)
T PLN02260 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEA-----SQLLPTN 157 (668)
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCcccc-----CCCCCCC
Confidence 9999998755433344667888999999999999999887 4 999999999999765432 2444 4566778
Q ss_pred cccccC
Q 024766 258 AATAVV 263 (263)
Q Consensus 258 ~Y~~sK 263 (263)
.|+.+|
T Consensus 158 ~Y~~sK 163 (668)
T PLN02260 158 PYSATK 163 (668)
T ss_pred CcHHHH
Confidence 899887
No 33
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.77 E-value=4e-18 Score=155.38 Aligned_cols=142 Identities=30% Similarity=0.444 Sum_probs=102.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCe-EEEEecCCc-cchhhhhhhcCCCceEEEEccccccc-----c--CCCcEEEEc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDE-VIVIDNFFT-GRKDNLVHHFRNPRFELIRHDVVEPI-----L--LEVDQIYHL 187 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~-~~~~~~~~~~~~~~v~~~~~Dv~~~~-----~--~~iD~Vi~~ 187 (263)
++|+||||+||||++++++|+++|++ |+++++... ...+.........++.++.+|++|.. + .++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 37999999999999999999999975 555554321 11122222212345778899998862 2 258999999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEcCcceecCCCC----------CCcCCCCC
Q 024766 188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---------GA-KFLLTSTSEVYGDPLE----------HPQKETYW 247 (263)
Q Consensus 188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---------~~-~iV~vSS~~vyg~~~~----------~~~~E~~~ 247 (263)
||.........+++..+++|+.|+.+++++|++. +. ++|++||.++||.... .+++|+
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~-- 158 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET-- 158 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc--
Confidence 9875443334567889999999999999999864 33 8999999999985321 135565
Q ss_pred CCCCCCCcCccccccC
Q 024766 248 GNVNPIGELLAATAVV 263 (263)
Q Consensus 248 ~~~~p~~~~~~Y~~sK 263 (263)
.|..+.+.|+.||
T Consensus 159 ---~~~~p~~~Y~~sK 171 (352)
T PRK10084 159 ---TAYAPSSPYSASK 171 (352)
T ss_pred ---CCCCCCChhHHHH
Confidence 4677888999887
No 34
>PLN02778 3,5-epimerase/4-reductase
Probab=99.77 E-value=6.2e-18 Score=151.58 Aligned_cols=128 Identities=17% Similarity=0.212 Sum_probs=93.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCCCCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVH 195 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~~~~ 195 (263)
.|+||||||+||||++|+++|+++|++|++..++.... +. +..|+.+ .++|+|||+||......
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~-~~------------v~~~l~~---~~~D~ViH~Aa~~~~~~ 72 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENR-AS------------LEADIDA---VKPTHVFNAAGVTGRPN 72 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCH-HH------------HHHHHHh---cCCCEEEECCcccCCCC
Confidence 46899999999999999999999999987543221111 00 1111211 26899999999765322
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCC------CCCcCCCCCCCCCCCCcCccccccC
Q 024766 196 ---YKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL------EHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 196 ---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~------~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
...++.+.+++|+.|+.+++++|++.+++++++||.++|+... +.+++|++ .|..+.+.||.||
T Consensus 73 ~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~----~p~~~~s~Yg~sK 145 (298)
T PLN02778 73 VDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEED----TPNFTGSFYSKTK 145 (298)
T ss_pred chhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCC----CCCCCCCchHHHH
Confidence 3457889999999999999999999988888888888987432 22467664 2444567899887
No 35
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.77 E-value=5.9e-19 Score=155.98 Aligned_cols=117 Identities=29% Similarity=0.422 Sum_probs=86.4
Q ss_pred EEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhh---cCCCce----EEEEcccccc-----ccC--CCcE
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH---FRNPRF----ELIRHDVVEP-----ILL--EVDQ 183 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~---~~~~~v----~~~~~Dv~~~-----~~~--~iD~ 183 (263)
||||||+|.||++|+++|++.+. +++++++++.+..+...+. ....++ ..+.+|+.|. .+. ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999999999986 7999999876654443333 233334 3458899887 334 7999
Q ss_pred EEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceec
Q 024766 184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg 235 (263)
|||.|+..+....+++|.+++++|+.||.|++++|.++++ ++|++||..+..
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~ 133 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVN 133 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCC
Confidence 9999998887778999999999999999999999999998 999999986543
No 36
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.76 E-value=3.7e-19 Score=158.64 Aligned_cols=122 Identities=30% Similarity=0.396 Sum_probs=92.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----cc--CCCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL--LEVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~--~~iD~Vi~~Ag 189 (263)
|+|+||||+|+||++|.+.|.++|++|+.+.|. ..|+.|. .+ .++|+||||||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa 60 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS--------------------DLDLTDPEAVAKLLEAFKPDVVINCAA 60 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------CS-TTSHHHHHHHHHHH--SEEEE---
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------hcCCCCHHHHHHHHHHhCCCeEeccce
Confidence 589999999999999999999999999998664 3344432 11 25999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
...+...+.+++..+.+|+.++.+++++|.+.+.++|++||..||+...+.+++|++ +..|.+.||.+|
T Consensus 61 ~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d-----~~~P~~~YG~~K 129 (286)
T PF04321_consen 61 YTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDD-----PPNPLNVYGRSK 129 (286)
T ss_dssp ---HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS---------SSHHHHHH
T ss_pred eecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCC-----CCCCCCHHHHHH
Confidence 876666777899999999999999999999999999999999999888888899994 677889999886
No 37
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.76 E-value=1.9e-18 Score=147.97 Aligned_cols=136 Identities=33% Similarity=0.500 Sum_probs=109.3
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccccc-------CCCcEEEEccCCC
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL-------LEVDQIYHLACPA 191 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~-------~~iD~Vi~~Ag~~ 191 (263)
|+||||+||||.+++++|+++|++|+.+.|+.......... .++.++.+|+.+... .++|+|||+|+..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 79999999999999999999999999888865543322211 178899999987622 2579999999864
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
.......+....++.|+.++.++++++++.++ ++|++||..+|+.....+++|++ +..+.+.|+.+|
T Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~-----~~~~~~~Y~~~K 144 (236)
T PF01370_consen 77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDS-----PINPLSPYGASK 144 (236)
T ss_dssp SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTS-----GCCHSSHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccc
Confidence 32122256788899999999999999999997 99999999999988788889994 557777788775
No 38
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.76 E-value=6e-18 Score=153.27 Aligned_cols=118 Identities=25% Similarity=0.381 Sum_probs=93.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCCccchhhhhhhcCCCceEEEEccccccc-----cCCCcEEEE
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----LLEVDQIYH 186 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~-----~~~iD~Vi~ 186 (263)
+++|+|+||||+||||++++++|+++| ++|++++|+..... .+.......++.++.+|++|.. +.++|+|||
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~-~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih 80 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQW-EMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVH 80 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHH-HHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEE
Confidence 467899999999999999999999986 68999887644322 2222223356889999998863 456999999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcc
Q 024766 187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSE 232 (263)
Q Consensus 187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~ 232 (263)
+||.......+.++.+.+++|+.|+.++++++++.+. +||++||..
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~ 127 (324)
T TIGR03589 81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK 127 (324)
T ss_pred CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC
Confidence 9997544334557788999999999999999999886 999999963
No 39
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.76 E-value=5e-18 Score=148.38 Aligned_cols=135 Identities=15% Similarity=0.132 Sum_probs=105.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEcccccccc------------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPIL------------ 178 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~~------------ 178 (263)
..++++++|||||++||.+++++|+++|++|+++.|+.++..+...++. ....++++.+|++++..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 3567899999999999999999999999999999998887666555553 24678999999988621
Q ss_pred CCCcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcceecCCCCCCcCCCCCCC
Q 024766 179 LEVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGN 249 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~ 249 (263)
..+|++|||||+.....+.+ ..++++++|+.+...+..+. .+.+. +||+|+|.+.|-
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~-------------- 148 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI-------------- 148 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC--------------
Confidence 25999999999876654433 34678999999987776664 44544 999999988775
Q ss_pred CCCCCcCccccccC
Q 024766 250 VNPIGELLAATAVV 263 (263)
Q Consensus 250 ~~p~~~~~~Y~~sK 263 (263)
|....+.|++||
T Consensus 149 --p~p~~avY~ATK 160 (265)
T COG0300 149 --PTPYMAVYSATK 160 (265)
T ss_pred --CCcchHHHHHHH
Confidence 444556777766
No 40
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.76 E-value=4.5e-18 Score=151.62 Aligned_cols=136 Identities=33% Similarity=0.494 Sum_probs=104.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCC-cEEEEccCCC
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEV-DQIYHLACPA 191 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~i-D~Vi~~Ag~~ 191 (263)
+||||||+||||++|+++|+++|++|++++|......... ..+..+.+|+++. ..... |+|||+|+..
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~ 75 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQS 75 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHhcCCCEEEEccccC
Confidence 4999999999999999999999999999998766543322 3556677776664 33345 9999999876
Q ss_pred CCCCCCC-CHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCC-CCCCcCCCCCCCCCCCCcCccccccC
Q 024766 192 SPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDP-LEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 192 ~~~~~~~-~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~-~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
....... ++...+.+|+.|+.+++++|++.++ +||+.||.++|+.. .+.+.+|+. .|..+.+.||.||
T Consensus 76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~----~~~~p~~~Yg~sK 146 (314)
T COG0451 76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL----GPPRPLNPYGVSK 146 (314)
T ss_pred chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc----CCCCCCCHHHHHH
Confidence 5444333 4667899999999999999999766 99998888887754 344778874 3555555898886
No 41
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.76 E-value=3e-18 Score=151.58 Aligned_cols=121 Identities=25% Similarity=0.354 Sum_probs=97.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccC--CCcEEEEccCC
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLACP 190 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~--~iD~Vi~~Ag~ 190 (263)
+|+||||+||||++++++|+++|++|++++|. .+|+.+. .+. ++|+|||+||.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------QLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------ccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 48999999999999999999999999999874 1233322 233 46999999986
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
.........+...+++|+.|+.++++++++.+.++|++||.++|+.....+++|++ +..+.+.|+.+|
T Consensus 61 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~-----~~~~~~~Y~~~K 128 (287)
T TIGR01214 61 TDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDD-----ATNPLNVYGQSK 128 (287)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCC-----CCCCcchhhHHH
Confidence 54333344677889999999999999999887899999999999876677888884 455677888776
No 42
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.76 E-value=8.7e-18 Score=149.83 Aligned_cols=141 Identities=33% Similarity=0.492 Sum_probs=105.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCCcc-chhhhhhhcCCCceEEEEccccccc-----cCC--CcEEEEc
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTG-RKDNLVHHFRNPRFELIRHDVVEPI-----LLE--VDQIYHL 187 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~-~~~~~~~~~~~~~v~~~~~Dv~~~~-----~~~--iD~Vi~~ 187 (263)
+|+||||||+||.+++++|+++| ++|++++|.... ..+.+........++++.+|+.|+. +.+ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 48999999999999999999987 689888764321 1222222222346788899998762 333 8999999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCcceecCCCCC-CcCCCCCCCCCCCCcCccccccC
Q 024766 188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--AKFLLTSTSEVYGDPLEH-PQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~iV~vSS~~vyg~~~~~-~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
|+........++++..+++|+.|+.++++++++.+ .++|++||.++||..... ++.|++ +..+.+.|+.+|
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~-----~~~~~~~Y~~sK 154 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETT-----PLAPSSPYSASK 154 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCC-----CCCCCCchHHHH
Confidence 98654433445678889999999999999998863 499999999999965433 577773 556677898876
No 43
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.75 E-value=3.8e-18 Score=152.79 Aligned_cols=132 Identities=23% Similarity=0.331 Sum_probs=93.9
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccc------cccc-----CCCcEEEEc
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV------EPIL-----LEVDQIYHL 187 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~------~~~~-----~~iD~Vi~~ 187 (263)
|+||||+||||++|+++|++.|++++++.++...... .... ..++ ..|.. +..+ .++|+|||+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~---~~~~--~~d~~~~~~~~~~~~~~~~~~~~d~Vih~ 75 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNL---VDLD--IADYMDKEDFLAQIMAGDDFGDIEAIFHE 75 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-HHhh---hhhh--hhhhhhHHHHHHHHhcccccCCccEEEEC
Confidence 7999999999999999999999976666554322111 0000 0111 11211 1111 369999999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
||..... ..+.+..+++|+.++.+++++|++.++++|++||.++||.....+.+|+ .+..|.+.||.||
T Consensus 76 A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK 144 (308)
T PRK11150 76 GACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEER-----EYEKPLNVYGYSK 144 (308)
T ss_pred ceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccC-----CCCCCCCHHHHHH
Confidence 9854432 2345678999999999999999998889999999999997655567776 3566667899887
No 44
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.75 E-value=2.5e-18 Score=149.07 Aligned_cols=144 Identities=29% Similarity=0.348 Sum_probs=123.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhh-----hhhcCCCceEEEEcccccc-------ccCCCc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL-----VHHFRNPRFELIRHDVVEP-------ILLEVD 182 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~-----~~~~~~~~v~~~~~Dv~~~-------~~~~iD 182 (263)
++|++||||-||.-|+.|++.|++.|++|..+.|+.......- ..+..+.++.+..+|++|. ...++|
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 3689999999999999999999999999999998744332221 1122456799999999997 235799
Q ss_pred EEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccc
Q 024766 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAA 259 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y 259 (263)
-|+|.|+......+.++|+.+.+++..|+.+++++.+..+ ++|...||+..||.....|++|+ +|+.|++.|
T Consensus 81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~-----TPFyPrSPY 155 (345)
T COG1089 81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPY 155 (345)
T ss_pred hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccC-----CCCCCCCHH
Confidence 9999999888777888899999999999999999998765 38999999999999999999999 799999999
Q ss_pred cccC
Q 024766 260 TAVV 263 (263)
Q Consensus 260 ~~sK 263 (263)
+.+|
T Consensus 156 AvAK 159 (345)
T COG1089 156 AVAK 159 (345)
T ss_pred HHHH
Confidence 9987
No 45
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.75 E-value=1.1e-17 Score=149.66 Aligned_cols=141 Identities=33% Similarity=0.575 Sum_probs=108.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc-----c--CCCcEEEEccCC
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----L--LEVDQIYHLACP 190 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~-----~--~~iD~Vi~~Ag~ 190 (263)
+|+||||+|+||++++++|+++|++|+++++......+..........+..+.+|+.++. + .++|+||||||.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 489999999999999999999999999887643332222222111125778889988763 2 369999999997
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
........++.+.+.+|+.++.++++++++.+. ++|++||.++||.....+++|++ |..+.+.|+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~-----~~~~~~~y~~sK 149 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDS-----PLGPINPYGRSK 149 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccC-----CCCCCCchHHHH
Confidence 544444456678899999999999999998885 99999999999977666788884 556777888776
No 46
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.73 E-value=3.3e-17 Score=147.73 Aligned_cols=146 Identities=16% Similarity=0.053 Sum_probs=105.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEccccccc------------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI------------ 177 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~------------ 177 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.++..+...++. ....+.++.+|+.+..
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999997665444333332 2346888999998752
Q ss_pred cCCCcEEEEccCCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCcce-ecCCCCCCcCCCCCCC
Q 024766 178 LLEVDQIYHLACPASPVH---YKYNPVKTIKTNVMGTLNMLGLAK----RVGAKFLLTSTSEV-YGDPLEHPQKETYWGN 249 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~~---~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~iV~vSS~~v-yg~~~~~~~~E~~~~~ 249 (263)
...+|+||||||...... ..+.++..+++|+.|.+.+.+.+. +...+||++||.+. ++........+.
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~---- 166 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWE---- 166 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccc----
Confidence 245999999999754322 235688899999999888877764 33349999999754 332222222222
Q ss_pred CCCCCcCccccccC
Q 024766 250 VNPIGELLAATAVV 263 (263)
Q Consensus 250 ~~p~~~~~~Y~~sK 263 (263)
.++.+...|+.||
T Consensus 167 -~~~~~~~~Y~~SK 179 (313)
T PRK05854 167 -RSYAGMRAYSQSK 179 (313)
T ss_pred -ccCcchhhhHHHH
Confidence 3556677899887
No 47
>PLN02996 fatty acyl-CoA reductase
Probab=99.73 E-value=4.2e-17 Score=155.56 Aligned_cols=127 Identities=21% Similarity=0.304 Sum_probs=97.1
Q ss_pred CccccCCCCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEecCCccch--hhhh-hh-----c--------------CC
Q 024766 109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRK--DNLV-HH-----F--------------RN 163 (263)
Q Consensus 109 ~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~--~~~~-~~-----~--------------~~ 163 (263)
++...+++|+|+|||||||||++|+++|++.+. +|+++.|...... +.+. ++ + ..
T Consensus 4 ~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~ 83 (491)
T PLN02996 4 SCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLIS 83 (491)
T ss_pred cHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhh
Confidence 345568999999999999999999999998753 6789988654321 1111 11 0 01
Q ss_pred CceEEEEcccccc------------ccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEc
Q 024766 164 PRFELIRHDVVEP------------ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTS 229 (263)
Q Consensus 164 ~~v~~~~~Dv~~~------------~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-~iV~vS 229 (263)
.++.++.+|++++ .+.++|+|||+|+... +..+++..+++|+.|+.+++++|++. +. ++|++|
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vS 160 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN---FDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVS 160 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC---CcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 5789999999733 2346999999997543 44578889999999999999999886 44 899999
Q ss_pred CcceecCCC
Q 024766 230 TSEVYGDPL 238 (263)
Q Consensus 230 S~~vyg~~~ 238 (263)
|.+|||...
T Consensus 161 T~~vyG~~~ 169 (491)
T PLN02996 161 TAYVCGEKS 169 (491)
T ss_pred eeEEecCCC
Confidence 999999643
No 48
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.73 E-value=2.3e-17 Score=145.29 Aligned_cols=123 Identities=17% Similarity=0.159 Sum_probs=94.4
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhh---hcCCCceEEEEcccccc------------
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH---HFRNPRFELIRHDVVEP------------ 176 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~---~~~~~~v~~~~~Dv~~~------------ 176 (263)
....+|+|+||||+++||.+++.+|+++|.+++.+.|+.+..+....+ .....++.++.+|++|.
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 356889999999999999999999999999988888876654433222 22223699999999886
Q ss_pred ccCCCcEEEEccCCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCcceec
Q 024766 177 ILLEVDQIYHLACPASPVHYKY-----NPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 177 ~~~~iD~Vi~~Ag~~~~~~~~~-----~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vyg 235 (263)
.+.++|++|||||+.. ..+.+ +....|++|+.|+..+.+++ ++.+ .+||.+||++-+-
T Consensus 88 ~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~ 155 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM 155 (282)
T ss_pred hcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc
Confidence 4567999999999876 33322 24567899999988888776 4445 5999999986553
No 49
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.72 E-value=6.4e-17 Score=145.19 Aligned_cols=138 Identities=25% Similarity=0.381 Sum_probs=105.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccCCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA 191 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag~~ 191 (263)
++|+||||+|+||+++++.|+++|++|++++|+...... .....++.+.+|+.+. .+.++|+|||+|+..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-----LEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc-----cccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 479999999999999999999999999999987543211 1223578889999875 345799999999743
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecC-CCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGD-PLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~-~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
. ....+++..+++|+.|+.++++++++.++ ++|++||.++||. ..+.+.+|+.+. .|....+.|+.+|
T Consensus 76 ~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK 145 (328)
T TIGR03466 76 R--LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPS--SLDDMIGHYKRSK 145 (328)
T ss_pred c--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCC--CcccccChHHHHH
Confidence 2 23456788899999999999999998876 9999999999995 445577887432 2223345677665
No 50
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.72 E-value=4.3e-17 Score=146.12 Aligned_cols=148 Identities=14% Similarity=0.035 Sum_probs=102.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEccccccc------------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI------------ 177 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~------------ 177 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++.++.+|+.+..
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 4678999999999999999999999999999999987554333222221 2356888999998762
Q ss_pred cCCCcEEEEccCCCCCCC--CCCCHHHHHHHHHHHHHH----HHHHHHHcC-CeEEEEcCcceecCCCCCCcCCCCCCCC
Q 024766 178 LLEVDQIYHLACPASPVH--YKYNPVKTIKTNVMGTLN----MLGLAKRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNV 250 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~~--~~~~~~~~~~~Nv~gt~~----ll~~a~~~~-~~iV~vSS~~vyg~~~~~~~~E~~~~~~ 250 (263)
+.++|+||||||...... ..+.++..+++|+.|+.. +++.+++.+ .+||++||.+.+... ..+.++.. ..
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~-~~~~~~~~--~~ 169 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRA-AIHFDDLQ--WE 169 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccC-CCCccccC--cc
Confidence 246999999999754332 234578889999999555 455555554 499999997644211 11112211 11
Q ss_pred CCCCcCccccccC
Q 024766 251 NPIGELLAATAVV 263 (263)
Q Consensus 251 ~p~~~~~~Y~~sK 263 (263)
.++.+...|+.||
T Consensus 170 ~~~~~~~~Y~~SK 182 (306)
T PRK06197 170 RRYNRVAAYGQSK 182 (306)
T ss_pred cCCCcHHHHHHHH
Confidence 3455677899887
No 51
>PLN02686 cinnamoyl-CoA reductase
Probab=99.72 E-value=4.6e-17 Score=149.97 Aligned_cols=151 Identities=18% Similarity=0.214 Sum_probs=108.4
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcC-------CCceEEEEccccccc-----cC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-------NPRFELIRHDVVEPI-----LL 179 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~-------~~~v~~~~~Dv~~~~-----~~ 179 (263)
...++|+|+||||+||||++++++|+++|++|+++.|+.+... .+..... ...+.++.+|++|.. +.
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~-~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE-KLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 3567899999999999999999999999999998877643322 1111100 135788899998863 45
Q ss_pred CCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCc--ceecC--CCC--CCcCCCCCCC-C
Q 024766 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTS--EVYGD--PLE--HPQKETYWGN-V 250 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-~iV~vSS~--~vyg~--~~~--~~~~E~~~~~-~ 250 (263)
++|.|||+|+...............++|+.|+.++++++++. ++ ++|++||. .+||. +.. .+++|+.|.. .
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 799999999875443321122345678999999999999886 55 99999996 57874 222 3477876543 2
Q ss_pred CCCCcCccccccC
Q 024766 251 NPIGELLAATAVV 263 (263)
Q Consensus 251 ~p~~~~~~Y~~sK 263 (263)
.+..+.+.|+.||
T Consensus 208 ~~~~p~~~Y~~sK 220 (367)
T PLN02686 208 FCRDNKLWYALGK 220 (367)
T ss_pred hcccccchHHHHH
Confidence 3566777899887
No 52
>PLN02583 cinnamoyl-CoA reductase
Probab=99.72 E-value=6.9e-17 Score=144.49 Aligned_cols=147 Identities=19% Similarity=0.212 Sum_probs=102.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccch--hhhhhhc-CCCceEEEEcccccc-----ccCCCcEEEE
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK--DNLVHHF-RNPRFELIRHDVVEP-----ILLEVDQIYH 186 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~--~~~~~~~-~~~~v~~~~~Dv~~~-----~~~~iD~Vi~ 186 (263)
.+|+|+||||+||||++++++|+++|++|+++.|+..... +.+.... ...++.++.+|++|. .+.++|.|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 4578999999999999999999999999999988533211 1111111 134688889999876 4567999999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCccee--cCC---CCCCcCCCCCCCCC-CCCcCcc
Q 024766 187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVY--GDP---LEHPQKETYWGNVN-PIGELLA 258 (263)
Q Consensus 187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-~iV~vSS~~vy--g~~---~~~~~~E~~~~~~~-p~~~~~~ 258 (263)
.++.... ....+++.+++|+.|+.++++++.+. +. +||++||.+++ +.. ...+++|+.|.+.. +......
T Consensus 85 ~~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~ 162 (297)
T PLN02583 85 CFDPPSD--YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW 162 (297)
T ss_pred eCccCCc--ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccH
Confidence 8754322 12246788999999999999999876 44 99999998664 311 23467887653222 1122236
Q ss_pred ccccC
Q 024766 259 ATAVV 263 (263)
Q Consensus 259 Y~~sK 263 (263)
|+.||
T Consensus 163 Y~~sK 167 (297)
T PLN02583 163 HALAK 167 (297)
T ss_pred HHHHH
Confidence 88776
No 53
>PRK05717 oxidoreductase; Validated
Probab=99.71 E-value=8.8e-17 Score=140.10 Aligned_cols=123 Identities=16% Similarity=0.102 Sum_probs=92.8
Q ss_pred ccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------
Q 024766 110 VGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------ 177 (263)
Q Consensus 110 ~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------ 177 (263)
+...+++|+++||||+|+||++++++|+++|++|++++|+..+..+...+. ..++.++.+|+++..
T Consensus 4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK05717 4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL--GENAWFIAMDVADEAQVAAGVAEVLGQ 81 (255)
T ss_pred CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 445678999999999999999999999999999999988654333322221 346778899998752
Q ss_pred cCCCcEEEEccCCCCCC--C----CCCCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCccee
Q 024766 178 LLEVDQIYHLACPASPV--H----YKYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVY 234 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~--~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vy 234 (263)
+..+|+||||||..... . ..+++++.+++|+.|+.++++++.+ .+.+||++||...+
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~ 148 (255)
T PRK05717 82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR 148 (255)
T ss_pred hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc
Confidence 23589999999975432 1 1224678899999999999999853 23489999997554
No 54
>PRK06194 hypothetical protein; Provisional
Probab=99.71 E-value=7.9e-17 Score=142.62 Aligned_cols=122 Identities=12% Similarity=0.017 Sum_probs=91.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+||||++++++|+++|++|++++|+.+...+...+.. ...++.++.+|++|.. +..
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999987554444333332 2346788999998762 235
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcC-------CeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVG-------AKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~-------~~iV~vSS~~vyg 235 (263)
+|+||||||........ ++++..+++|+.|+.++++++ .+.+ .+||++||.+.+.
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 153 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL 153 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence 89999999986543322 345677999999999987774 3332 3799999986664
No 55
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.71 E-value=2.7e-17 Score=146.52 Aligned_cols=124 Identities=23% Similarity=0.244 Sum_probs=94.2
Q ss_pred EEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----cc--CCCcEEEEccCCCC
Q 024766 120 VVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL--LEVDQIYHLACPAS 192 (263)
Q Consensus 120 lVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~--~~iD~Vi~~Ag~~~ 192 (263)
|||||+||||++|++.|+++|++|+++.+.. .+|+.+. .+ .++|+|||||+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~-------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~ 61 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK-------------------ELDLTRQADVEAFFAKEKPTYVILAAAKVG 61 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccc-------------------cCCCCCHHHHHHHHhccCCCEEEEeeeeec
Confidence 6999999999999999999999887664321 2455544 22 25899999998644
Q ss_pred CCC-CCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCc-cccccC
Q 024766 193 PVH-YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELL-AATAVV 263 (263)
Q Consensus 193 ~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~-~Y~~sK 263 (263)
... ...++...+++|+.|+.+++++|++.+. ++|++||..|||.....+++|+++.+ .|..+.+ .|+.||
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK 134 (306)
T PLN02725 62 GIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLT-GPPEPTNEWYAIAK 134 (306)
T ss_pred ccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhcc-CCCCCCcchHHHHH
Confidence 222 2345677899999999999999999986 89999999999977778899986432 2344433 488876
No 56
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.71 E-value=1.4e-16 Score=143.96 Aligned_cols=122 Identities=16% Similarity=0.119 Sum_probs=91.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
..+|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++.++.+|+.+.. ...
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 357899999999999999999999999999999987554433333221 2346888899998762 124
Q ss_pred CcEEEEccCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHH----cC---CeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKR----VG---AKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~---~~iV~vSS~~vyg 235 (263)
+|+||||||+..... ..+.++..+++|+.|+.++++++.. .+ .+||++||...+.
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 999999999753311 2234678899999999999888653 22 3999999977653
No 57
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.71 E-value=2.7e-16 Score=137.98 Aligned_cols=131 Identities=12% Similarity=0.092 Sum_probs=103.6
Q ss_pred ccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------------c
Q 024766 110 VGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------I 177 (263)
Q Consensus 110 ~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------------~ 177 (263)
+....+|+.|+||||++++|++++.+|+++|..+++.|.+.+...+...+..+..++..+.+|+++. .
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 3446788999999999999999999999999999999999888877777665445899999999876 3
Q ss_pred cCCCcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCc-ceecCCCCC
Q 024766 178 LLEVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTS-EVYGDPLEH 240 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~-~vyg~~~~~ 240 (263)
.+++|++|||||+.......+ ..++++++|+.|.++..++. .+.. .+||.++|+ +..|.+.-.
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~ 184 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLA 184 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccch
Confidence 457999999999876655333 35778999999998877775 3333 499999995 455544433
No 58
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.70 E-value=7.6e-17 Score=144.14 Aligned_cols=132 Identities=24% Similarity=0.366 Sum_probs=96.4
Q ss_pred EEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----c----cCCCcEEEEcc
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----I----LLEVDQIYHLA 188 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~----~~~iD~Vi~~A 188 (263)
|+||||+||||+++++.|+++|+ +|++++|..... ..... ....+..|+.++ . +.++|+|||+|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A 74 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNL----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG 74 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhh----hheeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence 68999999999999999999998 788887654321 11111 012344455443 1 14799999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
+.... ...++...+++|+.|+.+++++|++.++++|++||.++||... .+..|++ .+..+.+.|+.||
T Consensus 75 ~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~-~~~~e~~----~~~~p~~~Y~~sK 142 (314)
T TIGR02197 75 ACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGE-AGFREGR----ELERPLNVYGYSK 142 (314)
T ss_pred cccCc--cccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCC-CCccccc----CcCCCCCHHHHHH
Confidence 86432 2456788899999999999999998888999999999999764 3556654 2234667788876
No 59
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.70 E-value=1.6e-16 Score=144.39 Aligned_cols=144 Identities=26% Similarity=0.390 Sum_probs=109.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCCcc--chhhhhhhcCCCceEEEEcccccc-----ccCCCcEEE
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTG--RKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIY 185 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~--~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi 185 (263)
++.+++||||+||+|++|+.+|++++ .+|+++|..+.. ..++... +....+.++.+|+.+. .+.++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~-~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTG-FRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhc-ccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 46799999999999999999999998 699999876542 1111111 1367899999999886 45567 888
Q ss_pred EccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCC-CCcCCCCCCCCCCCCcCccccccC
Q 024766 186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLE-HPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 186 ~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~-~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
|||+...+.-...+.+..+++||.||.+++++|++.++ ++|++||.+|..+... ...+|+.+ .|......|+.||
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p---~p~~~~d~Y~~sK 157 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLP---YPLKHIDPYGESK 157 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCC---CccccccccchHH
Confidence 88875444434446889999999999999999999998 9999999999775544 44566642 3455557888876
No 60
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.69 E-value=2.1e-17 Score=144.30 Aligned_cols=139 Identities=27% Similarity=0.322 Sum_probs=85.3
Q ss_pred EEcCCChHHHHHHHHHHhCCC--eEEEEecCCccc--hhhhhhhc------------CCCceEEEEcccccccc------
Q 024766 121 VTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGR--KDNLVHHF------------RNPRFELIRHDVVEPIL------ 178 (263)
Q Consensus 121 VTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~--~~~~~~~~------------~~~~v~~~~~Dv~~~~~------ 178 (263)
|||||||+|++|+++|++++. +|+|+.|..+.. .+.+.+.+ ...++.++.+|++++.+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999987 899999976431 12221111 15799999999998743
Q ss_pred -----CCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCC-----CCC
Q 024766 179 -----LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKE-----TYW 247 (263)
Q Consensus 179 -----~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E-----~~~ 247 (263)
.++|+|||||+. ..+..++.+.+++||.||.++++.|.+... +|+|+||+.+.+...+. ..| ...
T Consensus 81 ~~~L~~~v~~IiH~Aa~---v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~-~~~~~~~~~~~ 156 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAAS---VNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGT-IEEKVYPEEED 156 (249)
T ss_dssp HHHHHHH--EEEE--SS----SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT---SSS-HHH--
T ss_pred hhccccccceeeecchh---hhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCc-ccccccccccc
Confidence 359999999954 445556777889999999999999986554 99999996565544332 211 111
Q ss_pred CCCCCCCcCccccccC
Q 024766 248 GNVNPIGELLAATAVV 263 (263)
Q Consensus 248 ~~~~p~~~~~~Y~~sK 263 (263)
....+......|.+||
T Consensus 157 ~~~~~~~~~~gY~~SK 172 (249)
T PF07993_consen 157 DLDPPQGFPNGYEQSK 172 (249)
T ss_dssp EEE--TTSEE-HHHHH
T ss_pred cchhhccCCccHHHHH
Confidence 1223455566898887
No 61
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.69 E-value=1.9e-16 Score=140.09 Aligned_cols=123 Identities=19% Similarity=0.125 Sum_probs=93.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.. ...++.++.+|++|.. +.
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3678999999999999999999999999999999987655443333321 2346788899998762 24
Q ss_pred CCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~--~~iV~vSS~~vyg 235 (263)
.+|+||||||......+. +++++.+++|+.|+.++++++. +.+ .+||++||...+.
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~ 148 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV 148 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc
Confidence 689999999975443332 2356778999999999998864 333 4899999987664
No 62
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.69 E-value=2.5e-16 Score=142.83 Aligned_cols=143 Identities=24% Similarity=0.282 Sum_probs=103.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCCccch--hhhhhhc--------C-C-CceEEEEccccccc------
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRK--DNLVHHF--------R-N-PRFELIRHDVVEPI------ 177 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~--~~~~~~~--------~-~-~~v~~~~~Dv~~~~------ 177 (263)
+|+|||||||||++++++|+++| .+|+++.|..+... +.+.+.+ . . .++.++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 67999998755221 1111100 0 1 47889999987642
Q ss_pred -----cCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCC
Q 024766 178 -----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN 251 (263)
Q Consensus 178 -----~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~ 251 (263)
..++|+|||||+... ....++..+++|+.|+.++++++.+.+. +||++||.++|+.....+..|++.....
T Consensus 81 ~~~~~~~~~d~vih~a~~~~---~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~ 157 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVN---WVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTP 157 (367)
T ss_pred HHHHHHhhCCEEEeCCcEec---cCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccccc
Confidence 246999999997543 2345677789999999999999998876 6999999999986544444555432222
Q ss_pred CCCcCccccccC
Q 024766 252 PIGELLAATAVV 263 (263)
Q Consensus 252 p~~~~~~Y~~sK 263 (263)
+....+.|+.||
T Consensus 158 ~~~~~~~Y~~sK 169 (367)
T TIGR01746 158 PPGLAGGYAQSK 169 (367)
T ss_pred ccccCCChHHHH
Confidence 333456788876
No 63
>PRK06196 oxidoreductase; Provisional
Probab=99.69 E-value=2.8e-16 Score=141.54 Aligned_cols=144 Identities=17% Similarity=0.075 Sum_probs=100.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+. ..+.++.+|++|.. ..+
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l---~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~ 99 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI---DGVEVVMLDLADLESVRAFAERFLDSGRR 99 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---hhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 457889999999999999999999999999999998765443333222 23778899998762 246
Q ss_pred CcEEEEccCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCcceecCCCCCCcCCCCCCCCCCC
Q 024766 181 VDQIYHLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI 253 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~--~~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~ 253 (263)
+|+||||||...... ..+.++..+++|+.|+.++++.+ ++.+ .+||++||.+..... ..+++.....++
T Consensus 100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~----~~~~~~~~~~~~ 175 (315)
T PRK06196 100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP----IRWDDPHFTRGY 175 (315)
T ss_pred CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC----CCccccCccCCC
Confidence 999999999754321 23457888999999987777654 4444 499999997543211 111111112345
Q ss_pred CcCccccccC
Q 024766 254 GELLAATAVV 263 (263)
Q Consensus 254 ~~~~~Y~~sK 263 (263)
.+...|+.||
T Consensus 176 ~~~~~Y~~SK 185 (315)
T PRK06196 176 DKWLAYGQSK 185 (315)
T ss_pred ChHHHHHHHH
Confidence 5667888876
No 64
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.69 E-value=4.3e-16 Score=139.22 Aligned_cols=125 Identities=14% Similarity=0.095 Sum_probs=93.4
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------ 177 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------ 177 (263)
...+++|+++||||+|+||.+++++|+++|++|++++|+.+..++...+.. ....+.++.+|+.|..
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999997654333222221 1345778899998762
Q ss_pred cCCCcEEEEccCCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcceec
Q 024766 178 LLEVDQIYHLACPASPVHYK------YNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~~~~------~~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~vyg 235 (263)
+.++|+||||||........ ++++..+++|+.|+.++++++. +.+. +||++||.++++
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 183 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS 183 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence 34799999999975443322 2346789999999999888753 4443 999999976654
No 65
>PRK06398 aldose dehydrogenase; Validated
Probab=99.68 E-value=5.7e-16 Score=135.57 Aligned_cols=113 Identities=19% Similarity=0.195 Sum_probs=88.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+... ..++..+.+|++++. +..
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 72 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS----------YNDVDYFKVDVSNKEQVIKGIDYVISKYGR 72 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc----------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999986432 125778899998762 246
Q ss_pred CcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~vyg 235 (263)
+|+||||||........+ ++++.+++|+.|+.++++++.+ .+ .+||++||...+.
T Consensus 73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 136 (258)
T PRK06398 73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA 136 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc
Confidence 999999999754333322 3567789999999999888643 33 4999999986664
No 66
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.68 E-value=4.4e-16 Score=139.17 Aligned_cols=123 Identities=19% Similarity=0.138 Sum_probs=92.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.-....+..+.+|++|.. +..
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999999999999876544333332212345666679998752 256
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vyg 235 (263)
+|+||||||......+. +++++.+++|+.|+.++++.+.. .+.+||++||.+.+.
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~ 148 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFA 148 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcC
Confidence 99999999975433322 23577899999999999988743 234899999987664
No 67
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.67 E-value=2.6e-16 Score=137.22 Aligned_cols=121 Identities=12% Similarity=0.124 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||++++++|+++|++|++++|..........+. ...++..+.+|++++. +..+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999887532211111111 2356788999998762 3469
Q ss_pred cEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCcceec
Q 024766 182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~--~~iV~vSS~~vyg 235 (263)
|++|||||....... .+++++.+++|+.|+.++++.+. +.+ .+||++||...+.
T Consensus 85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~ 148 (251)
T PRK12481 85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ 148 (251)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC
Confidence 999999997543332 23567889999999999888763 232 4899999987654
No 68
>PLN02253 xanthoxin dehydrogenase
Probab=99.67 E-value=4.5e-16 Score=137.44 Aligned_cols=123 Identities=19% Similarity=0.132 Sum_probs=91.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.....++.++.+|++|.. +.+
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT 94 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999999875443332222212346889999998762 246
Q ss_pred CcEEEEccCCCCCC--CC----CCCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcc-eec
Q 024766 181 VDQIYHLACPASPV--HY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSE-VYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~--~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~-vyg 235 (263)
+|+||||||..... .. .++++.++++|+.|+.++++++.+ .+ .+||++||.+ .++
T Consensus 95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 161 (280)
T PLN02253 95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIG 161 (280)
T ss_pred CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhccc
Confidence 99999999975321 11 234678899999999999887753 22 3899998854 454
No 69
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.67 E-value=5.6e-16 Score=134.89 Aligned_cols=121 Identities=17% Similarity=0.099 Sum_probs=91.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcC-CCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+...+....+.. ..++..+.+|+.+.. +..
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999999876544333222211 345788899998752 245
Q ss_pred CcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCccee
Q 024766 181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVY 234 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~----~-~~iV~vSS~~vy 234 (263)
+|+||||||........+ .+++++++|+.++.++++++.+. + .+||++||...+
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~ 150 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA 150 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc
Confidence 899999999754433322 35677899999999999987643 3 389999997543
No 70
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.67 E-value=5.5e-16 Score=136.57 Aligned_cols=117 Identities=21% Similarity=0.255 Sum_probs=88.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCcE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQ 183 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD~ 183 (263)
.|+++||||+||||++++++|+++|++|++++|+.+...+ +... ...++.++.+|++|.. ..++|+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~-~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD-LKAR-YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHh-ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999999999999999999999999999987543322 2111 1346888999998762 245899
Q ss_pred EEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCccee
Q 024766 184 IYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vy 234 (263)
||||||........ +++++.+++|+.|+.++++++ ++.+. +||++||.+.+
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 139 (276)
T PRK06482 80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ 139 (276)
T ss_pred EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc
Confidence 99999976543322 235678899999999999997 44444 89999997543
No 71
>PRK06128 oxidoreductase; Provisional
Probab=99.67 E-value=4.9e-16 Score=139.03 Aligned_cols=123 Identities=16% Similarity=0.144 Sum_probs=92.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccc-hhhhhhhc--CCCceEEEEccccccc------------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR-KDNLVHHF--RNPRFELIRHDVVEPI------------ 177 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~~~~~--~~~~v~~~~~Dv~~~~------------ 177 (263)
.+++|+++||||+|+||++++++|+++|++|+++++..+.. .+...+.+ ...++.++.+|+.+..
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999887654322 12222211 2446778899998752
Q ss_pred cCCCcEEEEccCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcceec
Q 024766 178 LLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYG 235 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~vyg 235 (263)
+.++|+||||||...... ..+++++.+++|+.|+.++++++.+. +.+||++||...|.
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~ 197 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ 197 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC
Confidence 346999999999643221 12357888999999999999998753 34999999988775
No 72
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.67 E-value=6.7e-16 Score=135.66 Aligned_cols=122 Identities=13% Similarity=0.105 Sum_probs=91.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc-----------cC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI-----------LL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~-----------~~ 179 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+.++..+...+.. ...++..+.+|++|+. +.
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g 84 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG 84 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence 3678999999999999999999999999999999987554433332221 1346888999998762 24
Q ss_pred CCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCccee
Q 024766 180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vy 234 (263)
.+|++|||||......+ .+++++.+++|+.+...+++.+ ++.+ .+||++||.+.+
T Consensus 85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~ 148 (263)
T PRK08339 85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIK 148 (263)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcccc
Confidence 59999999997543332 2346788999999988877665 3444 499999998754
No 73
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.67 E-value=5.2e-16 Score=135.45 Aligned_cols=119 Identities=12% Similarity=0.077 Sum_probs=87.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCcE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQ 183 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD~ 183 (263)
+|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.....++.++.+|++++. ...+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 47999999999999999999999999999999875543322222211126888999998752 234899
Q ss_pred EEEccCCCCCCCCC-----CCHHHHHHHHHHHHHHHHHH----HHHcC-CeEEEEcCccee
Q 024766 184 IYHLACPASPVHYK-----YNPVKTIKTNVMGTLNMLGL----AKRVG-AKFLLTSTSEVY 234 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~-----~~~~~~~~~Nv~gt~~ll~~----a~~~~-~~iV~vSS~~vy 234 (263)
||||||........ ++++..+++|+.|+.++++. +++.+ .+||++||...+
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~ 142 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGV 142 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhc
Confidence 99999975432211 24678899999999998774 44444 389999996543
No 74
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.67 E-value=4.7e-16 Score=135.76 Aligned_cols=122 Identities=13% Similarity=0.071 Sum_probs=92.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEccccccc------------c
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI------------L 178 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~------------~ 178 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++.++.+|++++. +
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 568899999999999999999999999999999997655444333332 2456888999998762 2
Q ss_pred CCCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcceec
Q 024766 179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYG 235 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~vyg 235 (263)
..+|+||||||....... .++++..+++|+.++.++++++.. .+ .+||++||...+.
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 150 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK 150 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc
Confidence 469999999996433221 235678899999999999888643 33 3899999975543
No 75
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.67 E-value=4.6e-16 Score=134.70 Aligned_cols=122 Identities=19% Similarity=0.144 Sum_probs=91.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|..+...+...+.. ...++..+.+|+++.. +..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999987544332222221 2335678899998763 236
Q ss_pred CcEEEEccCCCCCC---C----CCCCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPV---H----YKYNPVKTIKTNVMGTLNMLGLAKRV-----GAKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~---~----~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~~iV~vSS~~vyg 235 (263)
+|+||||||..... . ..+.+++.+++|+.++.++++++.+. +.+||++||.++|.
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 150 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL 150 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC
Confidence 89999999974321 1 11235677899999999999987643 24899999987764
No 76
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.67 E-value=6.2e-16 Score=133.69 Aligned_cols=122 Identities=15% Similarity=0.105 Sum_probs=91.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++++++||||+|+||.+++++|+++|++|++++|+.....+.........++.++.+|+.++. +..+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999999999999999999986544433332222356888999998762 2358
Q ss_pred cEEEEccCCCCCCC-C----CCCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcceec
Q 024766 182 DQIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~vyg 235 (263)
|+||||||...... + .+.+++.+++|+.|+.++++.+.+ .+ .+||++||.+.+.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 146 (251)
T PRK07231 83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR 146 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC
Confidence 99999998643322 1 224577899999998888877653 33 4899999987765
No 77
>PRK08589 short chain dehydrogenase; Validated
Probab=99.67 E-value=6.9e-16 Score=136.06 Aligned_cols=121 Identities=16% Similarity=0.120 Sum_probs=90.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEcccccc------------ccCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~------------~~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+ +...+...+.. ...++..+.+|++++ .+..
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 568899999999999999999999999999999987 43333333321 234688899999876 2346
Q ss_pred CcEEEEccCCCCC-CCCC----CCHHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCcceec
Q 024766 181 VDQIYHLACPASP-VHYK----YNPVKTIKTNVMGTLNMLGLAK----RVGAKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~-~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~~~iV~vSS~~vyg 235 (263)
+|+||||||.... .... +.+++.+++|+.|+..+++++. +.+.+||++||.+.+.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 146 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQA 146 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcC
Confidence 8999999997532 1221 2356788999999988877753 3345999999976553
No 78
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.66 E-value=6.4e-16 Score=134.38 Aligned_cols=121 Identities=16% Similarity=0.127 Sum_probs=91.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+.+|+++||||+|+||++++++|+++|++|++++|+.+...+...+.. ...++..+.+|++++. +.+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999999999999987654333222221 1356788999998762 246
Q ss_pred CcEEEEccCCCCC-CCC----CCCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCccee
Q 024766 181 VDQIYHLACPASP-VHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVY 234 (263)
Q Consensus 181 iD~Vi~~Ag~~~~-~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vy 234 (263)
+|+||||||.... ... .+++++.+++|+.|+.++++++.+ .+.+||++||...+
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~ 145 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLR 145 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhc
Confidence 8999999986433 111 234678899999999999999854 23489999997654
No 79
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.66 E-value=9.6e-16 Score=133.35 Aligned_cols=121 Identities=14% Similarity=0.036 Sum_probs=90.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.++..+...+.. ...++.++.+|+.++. +..
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 467899999999999999999999999999999997655443333221 2346788899998762 246
Q ss_pred CcEEEEccCCCCC-CCC----CCCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCccee
Q 024766 181 VDQIYHLACPASP-VHY----KYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVY 234 (263)
Q Consensus 181 iD~Vi~~Ag~~~~-~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vy 234 (263)
+|+||||||.... ... .+++++.+++|+.++.++++++ ++.+ .+||++||...+
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~ 147 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGH 147 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhh
Confidence 9999999997532 121 1346788999999988876654 3343 389999997655
No 80
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1e-15 Score=135.18 Aligned_cols=119 Identities=14% Similarity=0.046 Sum_probs=89.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVD 182 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD 182 (263)
.+|+++||||+|+||++++++|+++|++|++++|+.+.... +... ...++..+.+|++|.. +..+|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARAD-FEAL-HPDRALARLLDVTDFDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHH-HHhh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999999999999999999999999999987544322 2111 2346778899998762 23589
Q ss_pred EEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCcceec
Q 024766 183 QIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vyg 235 (263)
+||||||........+ .+.+.+++|+.|+.++++++. +.+ .+||++||.+.+.
T Consensus 81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~ 142 (277)
T PRK06180 81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI 142 (277)
T ss_pred EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC
Confidence 9999999754333322 346678999999999999853 333 3899999976553
No 81
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.1e-15 Score=134.07 Aligned_cols=114 Identities=20% Similarity=0.182 Sum_probs=88.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVD 182 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD 182 (263)
++++++||||+|+||++++++|+++|++|++++|+.+... ....+.++.+|+.|+. +..+|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d 75 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA-------PIPGVELLELDVTDDASVQAAVDEVIARAGRID 75 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence 3578999999999999999999999999999998754322 1235778899998762 34589
Q ss_pred EEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcceec
Q 024766 183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vyg 235 (263)
+||||||........ ++++..+++|+.|+.++++.+ ++.+. +||++||...+.
T Consensus 76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 137 (270)
T PRK06179 76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL 137 (270)
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC
Confidence 999999975543332 245788999999999998885 44454 999999976554
No 82
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.66 E-value=6.4e-16 Score=139.48 Aligned_cols=144 Identities=24% Similarity=0.251 Sum_probs=106.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch--hhhhhh---------cCCCceEEEEcccccccc------
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK--DNLVHH---------FRNPRFELIRHDVVEPIL------ 178 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~--~~~~~~---------~~~~~v~~~~~Dv~~~~~------ 178 (263)
+++++||||||+|.+|+.+|+.+-. +|+|+.|..+... +.+... ....+++++.+|+.++.+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 4799999999999999999999865 9999998755221 111111 135689999999987643
Q ss_pred -----CCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCC----CC
Q 024766 179 -----LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETY----WG 248 (263)
Q Consensus 179 -----~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~----~~ 248 (263)
+++|.|||||+ .+++...+.+....||.||..++++|..... .++||||++|+........+++. ..
T Consensus 81 ~~~La~~vD~I~H~gA---~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~ 157 (382)
T COG3320 81 WQELAENVDLIIHNAA---LVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT 157 (382)
T ss_pred HHHHhhhcceEEecch---hhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence 35999999995 4555667889999999999999999988765 69999999998754333332222 11
Q ss_pred CCCCCCcCccccccC
Q 024766 249 NVNPIGELLAATAVV 263 (263)
Q Consensus 249 ~~~p~~~~~~Y~~sK 263 (263)
...-....++|+.||
T Consensus 158 ~~~~~~~~~GY~~SK 172 (382)
T COG3320 158 RNVGQGLAGGYGRSK 172 (382)
T ss_pred ccccCccCCCcchhH
Confidence 222345557999987
No 83
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.66 E-value=9.9e-16 Score=150.59 Aligned_cols=141 Identities=28% Similarity=0.337 Sum_probs=103.7
Q ss_pred CEEEEEcCCChHHHHHHHHHH--hCCCeEEEEecCCccch-hhhhhhcCCCceEEEEccccccc----------cCCCcE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLI--DRGDEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDVVEPI----------LLEVDQ 183 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll--~~G~~V~~l~r~~~~~~-~~~~~~~~~~~v~~~~~Dv~~~~----------~~~iD~ 183 (263)
|+|+|||||||||++|+++|+ +.|++|++++|+..... +.........+++++.+|+.++. +.++|+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~D~ 80 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGDIDH 80 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcCCCE
Confidence 479999999999999999999 58999999998543211 11111112357889999998742 257999
Q ss_pred EEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCcccccc
Q 024766 184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAV 262 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~s 262 (263)
||||||.... .......+++|+.|+.+++++|++.+. +||++||.++||... .++.|+++. .+..+.+.|+.|
T Consensus 81 Vih~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~-~~~~e~~~~--~~~~~~~~Y~~s 154 (657)
T PRK07201 81 VVHLAAIYDL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYE-GVFREDDFD--EGQGLPTPYHRT 154 (657)
T ss_pred EEECceeecC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCcc-Cccccccch--hhcCCCCchHHH
Confidence 9999985432 345677789999999999999999876 999999999998543 345665432 123334568877
Q ss_pred C
Q 024766 263 V 263 (263)
Q Consensus 263 K 263 (263)
|
T Consensus 155 K 155 (657)
T PRK07201 155 K 155 (657)
T ss_pred H
Confidence 6
No 84
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.65 E-value=1.4e-15 Score=147.29 Aligned_cols=137 Identities=20% Similarity=0.244 Sum_probs=104.1
Q ss_pred CCccccCCCCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEecCCccc--hhhhh-hhc-------------------C
Q 024766 108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGR--KDNLV-HHF-------------------R 162 (263)
Q Consensus 108 ~~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~--~~~~~-~~~-------------------~ 162 (263)
..+...+++|+|+|||||||||++|+++|++.+. +|+++.|..... .+.+. ++. .
T Consensus 111 ~~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~ 190 (605)
T PLN02503 111 IGIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFM 190 (605)
T ss_pred cchhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccc
Confidence 3455678999999999999999999999998764 678998864332 11111 110 1
Q ss_pred CCceEEEEccccccc-----------cCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEc
Q 024766 163 NPRFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--AKFLLTS 229 (263)
Q Consensus 163 ~~~v~~~~~Dv~~~~-----------~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~iV~vS 229 (263)
..++.++.+|++++. ..++|+|||+|+.. .+..+++..+++|+.|+.+++++|++.+ .++|++|
T Consensus 191 ~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v---~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vS 267 (605)
T PLN02503 191 LSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANT---TFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVS 267 (605)
T ss_pred cccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECcccc---ccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEcc
Confidence 346889999998863 24599999999654 3456789999999999999999998875 3899999
Q ss_pred CcceecCCCCCCcCCCCCC
Q 024766 230 TSEVYGDPLEHPQKETYWG 248 (263)
Q Consensus 230 S~~vyg~~~~~~~~E~~~~ 248 (263)
|++|||...+ .+.|..++
T Consensus 268 TayVyG~~~G-~i~E~~y~ 285 (605)
T PLN02503 268 TAYVNGQRQG-RIMEKPFR 285 (605)
T ss_pred CceeecCCCC-eeeeeecC
Confidence 9999997543 56666543
No 85
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.65 E-value=1.1e-15 Score=133.91 Aligned_cols=120 Identities=14% Similarity=0.111 Sum_probs=91.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++++++||||+|+||.+++++|+++|++|++++|+.+...+...... ...++.++.+|++++. +.+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568899999999999999999999999999999997554333322221 2346788899998763 246
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH-----cC-CeEEEEcCcce
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR-----VG-AKFLLTSTSEV 233 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~-----~~-~~iV~vSS~~v 233 (263)
+|+||||||........ ++++.++++|+.|+.++++++.+ .+ .+||++||...
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~ 150 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMG 150 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccc
Confidence 99999999864433222 34678899999999999999853 23 38999999643
No 86
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.65 E-value=2.1e-15 Score=132.08 Aligned_cols=118 Identities=18% Similarity=0.235 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+. ..++.++.+|+.++. +..+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL--GERARFIATDITDDAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999999999999999765433332222 346788999998762 3468
Q ss_pred cEEEEccCCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCcce
Q 024766 182 DQIYHLACPASPVHY---KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEV 233 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~v 233 (263)
|+||||||....... .+++++.+++|+.++.++++.+.. .+.+||++||.+.
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~ 140 (261)
T PRK08265 82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISA 140 (261)
T ss_pred CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence 999999996433222 234678899999999999887643 2248999999654
No 87
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.65 E-value=1.1e-15 Score=135.10 Aligned_cols=115 Identities=16% Similarity=0.164 Sum_probs=85.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------c-CCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------L-LEV 181 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~-~~i 181 (263)
.+|+++||||+|+||.+++++|+++|++|++++|+.+...+ +. ...++.+.+|++|.. . ..+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~-l~----~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i 77 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA-LE----AEGLEAFQLDYAEPESIAALVAQVLELSGGRL 77 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----HCCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence 46799999999999999999999999999999987544322 11 225778899998752 1 358
Q ss_pred cEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHH----HHHHHHHcCC-eEEEEcCccee
Q 024766 182 DQIYHLACPASPVHYKY----NPVKTIKTNVMGTLN----MLGLAKRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~----ll~~a~~~~~-~iV~vSS~~vy 234 (263)
|+||||||........+ +++..+++|+.|+.+ +++.+++.+. +||++||...+
T Consensus 78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~ 139 (277)
T PRK05993 78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGL 139 (277)
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhc
Confidence 99999999765443332 346789999999554 5555666654 99999997544
No 88
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.65 E-value=1.3e-15 Score=134.32 Aligned_cols=123 Identities=16% Similarity=0.169 Sum_probs=91.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.. ...++..+.+|+.+.. +.
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG 86 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999999999987544333322221 1346788899998752 24
Q ss_pred CCcEEEEccCCCCCCCC-------------------CCCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVHY-------------------KYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~-------------------~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vyg 235 (263)
.+|+||||||....... .+++++.+++|+.++..+++.+ ++.+ .+||++||...+.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 166 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT 166 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence 69999999996432211 1246778999999998777664 3333 4899999987765
No 89
>PRK09186 flagellin modification protein A; Provisional
Probab=99.65 E-value=1.5e-15 Score=131.96 Aligned_cols=144 Identities=17% Similarity=0.218 Sum_probs=96.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhh---cCCCceEEEEccccccc------------c
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH---FRNPRFELIRHDVVEPI------------L 178 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~---~~~~~v~~~~~Dv~~~~------------~ 178 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+. .....+.++.+|+.|+. +
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999998765543333222 12345667789998762 2
Q ss_pred CCCcEEEEccCCCCC---CCC-C---CCHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcceecCCCCCCcCCCC
Q 024766 179 LEVDQIYHLACPASP---VHY-K---YNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETY 246 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~---~~~-~---~~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~vyg~~~~~~~~E~~ 246 (263)
..+|+||||||.... ..+ + +.+...+++|+.++.++++++. +.+. +||++||.+.+..+.... .|.
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-~~~- 159 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEI-YEG- 159 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchh-ccc-
Confidence 348999999975321 111 1 2356778999999888776653 3443 999999976543332211 222
Q ss_pred CCCCCCCCcCccccccC
Q 024766 247 WGNVNPIGELLAATAVV 263 (263)
Q Consensus 247 ~~~~~p~~~~~~Y~~sK 263 (263)
.+......|++||
T Consensus 160 ----~~~~~~~~Y~~sK 172 (256)
T PRK09186 160 ----TSMTSPVEYAAIK 172 (256)
T ss_pred ----cccCCcchhHHHH
Confidence 1333334688776
No 90
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.65 E-value=1.5e-15 Score=133.88 Aligned_cols=119 Identities=16% Similarity=0.124 Sum_probs=90.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVD 182 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD 182 (263)
.+|+++||||+|+||++++++|+++|++|++++|+.+...+. .+. ....+.++.+|+++.. +..+|
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADL-AEK-YGDRLLPLALDVTDRAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHh-ccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 457999999999999999999999999999999875543222 222 1345778889998752 24689
Q ss_pred EEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcceec
Q 024766 183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vyg 235 (263)
+||||||........ +++++.+++|+.++.++++.+ ++.+. +||++||.+.+.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~ 141 (275)
T PRK08263 80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS 141 (275)
T ss_pred EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC
Confidence 999999976543322 356788999999998888875 44443 899999977665
No 91
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.65 E-value=1.9e-15 Score=133.00 Aligned_cols=119 Identities=19% Similarity=0.078 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++++++||||+|+||++++++|+++|++|++++|+.+...+..... ..+.++.+|+.++. ...+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---GLVVGGPLDVTDPASFAAFLDAVEADLGPI 79 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999988654433222221 15778889998762 2468
Q ss_pred cEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcceec
Q 024766 182 DQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~vyg 235 (263)
|++|||||........+ .+++++++|+.|+.++++.+. +.+. +||++||.+.+.
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 142 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI 142 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC
Confidence 99999999754433222 356788999999999887753 4444 899999976543
No 92
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.65 E-value=1.8e-15 Score=131.88 Aligned_cols=118 Identities=19% Similarity=0.159 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||.+++++|+++|++|++++++.+...+.+. ...+.++.+|++++. +.++
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRV 80 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----hCCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 567899999999999999999999999999988765443222222 124778899998762 2469
Q ss_pred cEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCcceec
Q 024766 182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vyg 235 (263)
|+||||||......+ .+++++.+++|+.|+.++++.+ ++.+ .+||++||...++
T Consensus 81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 143 (255)
T PRK06463 81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIG 143 (255)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCC
Confidence 999999997533222 2246788999999977765554 3333 4999999987765
No 93
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.65 E-value=1.3e-15 Score=131.90 Aligned_cols=121 Identities=13% Similarity=0.120 Sum_probs=90.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+........... ...++..+.+|+++.. ..++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 67899999999999999999999999999999998642111111111 1346888999998762 2469
Q ss_pred cEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCcceec
Q 024766 182 DQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~--~~iV~vSS~~vyg 235 (263)
|+||||||........ +++++.+++|+.++.++++.+.+ .+ .+||++||...|.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 145 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ 145 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc
Confidence 9999999975443322 24677899999999999988743 33 3899999987775
No 94
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.64 E-value=1.9e-15 Score=131.18 Aligned_cols=122 Identities=14% Similarity=0.073 Sum_probs=89.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-ecCCccchhhhhhhc-CCCceEEEEcccccccc-------------
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVI-DNFFTGRKDNLVHHF-RNPRFELIRHDVVEPIL------------- 178 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~------------- 178 (263)
+++++++||||+|+||.+++++|+++|++|+++ .|+.+...+...... ...++.++.+|+.|...
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 567899999999999999999999999998775 454433322222221 23467889999988621
Q ss_pred -----CCCcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHc--C-CeEEEEcCcceec
Q 024766 179 -----LEVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRV--G-AKFLLTSTSEVYG 235 (263)
Q Consensus 179 -----~~iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~--~-~~iV~vSS~~vyg 235 (263)
.++|+||||||........+ .++..+++|+.|+.++++.+.+. . .++|++||..++.
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~ 152 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL 152 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC
Confidence 25899999999754433222 24667889999999999988653 2 3899999987765
No 95
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.64 E-value=3e-15 Score=130.14 Aligned_cols=114 Identities=17% Similarity=0.140 Sum_probs=88.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+. ......+.++.+|+.+.. +..+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 76 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRL 76 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999999999999999999986543 112446788899998752 2458
Q ss_pred cEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----c-C-CeEEEEcCccee
Q 024766 182 DQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----V-G-AKFLLTSTSEVY 234 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~-~-~~iV~vSS~~vy 234 (263)
|+||||||........ +.+++.+++|+.|+.++++.+.. . + .+||++||...+
T Consensus 77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~ 139 (252)
T PRK07856 77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR 139 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC
Confidence 9999999965432222 23578899999999999998753 2 2 489999997654
No 96
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.4e-15 Score=130.26 Aligned_cols=122 Identities=17% Similarity=0.072 Sum_probs=91.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+.........++..+.+|++|+. +..+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5688999999999999999999999999999999876544433333323456889999998762 2469
Q ss_pred cEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcce-ec
Q 024766 182 DQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEV-YG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~v-yg 235 (263)
|+||||||........ +++++.+++|+.++.++++.+ ++.+. +||++||... ++
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~ 146 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG 146 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC
Confidence 9999999975433222 235667899999998877765 34443 8999999744 44
No 97
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.64 E-value=2.7e-15 Score=130.57 Aligned_cols=121 Identities=18% Similarity=0.027 Sum_probs=88.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+++...+...... ...++.++.+|+.+.. ...
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 567899999999999999999999999999999997654433333221 2345778899998752 235
Q ss_pred CcEEEEccCCCCCCCC----CCCHHHHHHHHHHH----HHHHHHHH-HHcCC-eEEEEcCccee
Q 024766 181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMG----TLNMLGLA-KRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~g----t~~ll~~a-~~~~~-~iV~vSS~~vy 234 (263)
+|+||||||....... .+.++..+++|+.| +.++++.+ +..+. +||++||...+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~ 148 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSH 148 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhc
Confidence 8999999997543222 22356778999999 45555555 54444 99999996543
No 98
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.64 E-value=2.3e-15 Score=131.20 Aligned_cols=117 Identities=15% Similarity=0.190 Sum_probs=89.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+.+|+++||||+|+||.+++++|+++|++|++++|+.+...+..... ..++.++.+|++++. +..+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI--GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 55789999999999999999999999999999998765443322222 345788899998762 2469
Q ss_pred cEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEcCcc
Q 024766 182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV------GAKFLLTSTSE 232 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~------~~~iV~vSS~~ 232 (263)
|+||||||....... .+++++.+++|+.++.++++++... +.+||++||..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~ 142 (257)
T PRK07067 82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQA 142 (257)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHH
Confidence 999999997543222 2346778999999999999987532 24899999953
No 99
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.6e-15 Score=131.15 Aligned_cols=120 Identities=13% Similarity=0.092 Sum_probs=90.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCCCc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEVD 182 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~iD 182 (263)
+++++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|+.+.. +.++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999987554333222221 2346888899998762 24689
Q ss_pred EEEEccCCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCcceec
Q 024766 183 QIYHLACPASPVHYKYN-----PVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYG 235 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~~~-----~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vyg 235 (263)
+||||||........+. +.+.+++|+.|+.++++.+.. .+.+||++||...+.
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~ 142 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT 142 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 99999997554333322 567799999999999998743 334899999977664
No 100
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.6e-15 Score=130.99 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=88.2
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~ 179 (263)
..+++|+++||||+|+||++++++|+++|++|++++|+.... ....+.++.+|+.++. +.
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--------LPEGVEFVAADLTTAEGCAAVARAVLERLG 76 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--------cCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 346789999999999999999999999999999999874421 1235778899998762 24
Q ss_pred CCcEEEEccCCCCCC--C----CCCCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPV--H----YKYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~--~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vyg 235 (263)
.+|+||||||..... . ..+++++.+++|+.|+.++++.+ ++.+. +||++||...+.
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 143 (260)
T PRK06523 77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRL 143 (260)
T ss_pred CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccC
Confidence 689999999964211 1 12346788999999998887665 33443 899999986654
No 101
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.64 E-value=3e-15 Score=130.42 Aligned_cols=122 Identities=16% Similarity=0.085 Sum_probs=90.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------c
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L 178 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~ 178 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.+ ...++..+.+|+.++. +
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999987543222222211 1346778899998762 3
Q ss_pred CCCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCccee
Q 024766 179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVY 234 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vy 234 (263)
..+|+||||||....... .+++++.+++|+.|+.++++++. +.+ .+||++||.+.+
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 149 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGI 149 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence 458999999997543322 23467889999999998887753 333 389999997543
No 102
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.63 E-value=2.4e-15 Score=130.53 Aligned_cols=121 Identities=17% Similarity=0.070 Sum_probs=89.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++..+.+|+.++. ...
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999999999999998665443333322 2457888999998762 236
Q ss_pred CcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCccee
Q 024766 181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vy 234 (263)
+|+||||||........+ .++..+++|+.|+.++++.+ ++.+. +||++||...+
T Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~ 144 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGL 144 (258)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence 899999998654433222 34567889999966666654 44444 89999997544
No 103
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.63 E-value=2.2e-15 Score=137.00 Aligned_cols=122 Identities=13% Similarity=0.123 Sum_probs=92.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+..++...+.. ...++.++.+|++|.. +..
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 567899999999999999999999999999999987655443333221 2446778889998752 256
Q ss_pred CcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vyg 235 (263)
+|++|||||......+.+ ++++.+++|+.|+.++++++. +.+ .+||++||...+.
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~ 148 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA 148 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC
Confidence 999999999765444333 356779999999999887753 333 3899999976553
No 104
>PRK07985 oxidoreductase; Provisional
Probab=99.63 E-value=2.4e-15 Score=134.35 Aligned_cols=123 Identities=18% Similarity=0.152 Sum_probs=91.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcc-chhhhhhhc--CCCceEEEEccccccc------------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG-RKDNLVHHF--RNPRFELIRHDVVEPI------------ 177 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~-~~~~~~~~~--~~~~v~~~~~Dv~~~~------------ 177 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|..+. ..+.+.+.. ...++.++.+|+++..
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988765322 222222221 2346778899998752
Q ss_pred cCCCcEEEEccCCCCC-CC----CCCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcceec
Q 024766 178 LLEVDQIYHLACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYG 235 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~vyg 235 (263)
+..+|++|||||.... .. ..+++++.+++|+.|+.++++++.+. +.+||++||...+.
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~ 191 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ 191 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc
Confidence 3468999999986422 11 12356788999999999999988653 34899999987775
No 105
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.63 E-value=2.8e-15 Score=130.86 Aligned_cols=119 Identities=21% Similarity=0.120 Sum_probs=90.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc-------------cCCCc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-------------LLEVD 182 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~-------------~~~iD 182 (263)
+|+++||||+|+||++++++|+++|++|++++|+.+...+.... ....++.++.+|+.+.. ...+|
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAE-LGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 47899999999999999999999999999999876543332222 23457889999998751 34689
Q ss_pred EEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCc-ceec
Q 024766 183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTS-EVYG 235 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~-~vyg 235 (263)
+||||||......+. ++++..+++|+.|+.++++++. ..+ .+||++||. +.||
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 142 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG 142 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC
Confidence 999999976543322 2467789999999999988874 333 489999996 4555
No 106
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.63 E-value=2.7e-15 Score=132.36 Aligned_cols=121 Identities=18% Similarity=0.153 Sum_probs=90.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEccccccc-----------cCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI-----------LLE 180 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~-----------~~~ 180 (263)
++|+++||||+|+||++++++|+++|++|++++|+.+...+...... ...++.++.+|+.|+. +..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 46789999999999999999999999999999987654433322211 1346889999998863 245
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCc-ceec
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTS-EVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~-~vyg 235 (263)
+|+||||||........ +++++.+++|+.|+.++++.+ ++.+. +||++||. +.+|
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~ 146 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG 146 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC
Confidence 89999999975543322 245677899999999988885 44444 89999996 4444
No 107
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.63 E-value=3.3e-15 Score=130.29 Aligned_cols=121 Identities=14% Similarity=0.049 Sum_probs=87.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.. ..+...+.. ...++..+.+|+++.. +..
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR 84 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 56789999999999999999999999999999998642 222222221 2346778899998751 246
Q ss_pred CcEEEEccCCCCC-CC----CCCCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcceec
Q 024766 181 VDQIYHLACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vyg 235 (263)
+|+||||||.... .. ..+++++.+++|+.++.++++.+ ++.+. +||++||...++
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 149 (260)
T PRK12823 85 IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG 149 (260)
T ss_pred CeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC
Confidence 9999999985321 11 12346778899999988766654 34443 899999987764
No 108
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.63 E-value=3e-15 Score=130.40 Aligned_cols=121 Identities=16% Similarity=0.184 Sum_probs=91.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+.+.. +...+.. ...++.++.+|++++. +.
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG 82 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 46788999999999999999999999999999999876543 2222221 2456888999998762 23
Q ss_pred CCcEEEEccCCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCccee
Q 024766 180 EVDQIYHLACPASPVHYK---YNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vy 234 (263)
.+|+||||||.......+ ++++..+++|+.++.++++.+.+ .+.+||++||...+
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~ 144 (258)
T PRK08628 83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL 144 (258)
T ss_pred CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc
Confidence 689999999964333222 34677899999999999888643 23489999996554
No 109
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.63 E-value=3.8e-15 Score=128.79 Aligned_cols=121 Identities=19% Similarity=0.176 Sum_probs=89.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~ 179 (263)
+++|+++||||+|+||.+++++|+++|++|+++.++.....+.....+ ...++.++.+|+.++. +.
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999877654333222222221 2346888999998762 24
Q ss_pred CCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCccee
Q 024766 180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~vy 234 (263)
.+|+||||||........ +.+++.+++|+.++.++++++.. .+ .+||++||...+
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 147 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ 147 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc
Confidence 589999999975543322 35678899999999999998753 22 389999996443
No 110
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.63 E-value=2.6e-15 Score=130.36 Aligned_cols=119 Identities=14% Similarity=0.114 Sum_probs=87.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
.|+++||||+|+||++++++|+++|++|++++|+.....+...+.+ ...++.++.+|++++. +..+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 3689999999999999999999999999999986443222222221 2346888999998862 2469
Q ss_pred cEEEEccCCCCCC--CC----CCCHHHHHHHHHHHHHHHHHHHHHc-----C-----C-eEEEEcCccee
Q 024766 182 DQIYHLACPASPV--HY----KYNPVKTIKTNVMGTLNMLGLAKRV-----G-----A-KFLLTSTSEVY 234 (263)
Q Consensus 182 D~Vi~~Ag~~~~~--~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-----~-----~-~iV~vSS~~vy 234 (263)
|+||||||..... .. .+.+++.+++|+.|+.++++.+.+. + . +||++||...+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 151 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI 151 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc
Confidence 9999999864321 11 2346778999999999998887432 1 2 69999997654
No 111
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.63 E-value=2.1e-15 Score=131.94 Aligned_cols=120 Identities=18% Similarity=0.157 Sum_probs=89.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+.. ... ..++..+.+|+.+.. +..+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLR-QRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 56789999999999999999999999999999998754433222 221 345778899998752 2469
Q ss_pred cEEEEccCCCCCC-CC-C---C----CHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCcceec
Q 024766 182 DQIYHLACPASPV-HY-K---Y----NPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~-~~-~---~----~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vyg 235 (263)
|++|||||+.... .. + + .+++.+++|+.++.++++++.. .+.+||++||.+.+.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 148 (263)
T PRK06200 82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFY 148 (263)
T ss_pred CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcC
Confidence 9999999974321 11 1 1 2567789999999998888753 334899999987654
No 112
>PRK06182 short chain dehydrogenase; Validated
Probab=99.63 E-value=2.1e-15 Score=132.75 Aligned_cols=114 Identities=14% Similarity=0.110 Sum_probs=85.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVD 182 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD 182 (263)
++|+++||||+|+||++++++|+++|++|++++|+.++..+. ....+.++.+|++|.. ..++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~-----~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id 76 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-----ASLGVHPLSLDVTDEASIKAAVDTIIAEEGRID 76 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999999999999875443221 1224778889998762 23699
Q ss_pred EEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHH----HHHHcCC-eEEEEcCcce
Q 024766 183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLG----LAKRVGA-KFLLTSTSEV 233 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~----~a~~~~~-~iV~vSS~~v 233 (263)
+||||||........ ++++..+++|+.|+.++++ .+++.+. +||++||.+.
T Consensus 77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~ 136 (273)
T PRK06182 77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGG 136 (273)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhh
Confidence 999999975443322 3467889999999666555 4555554 9999999754
No 113
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.63 E-value=5.3e-15 Score=129.06 Aligned_cols=122 Identities=16% Similarity=0.106 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~ 179 (263)
..+|+++||||+|+||++++++|+++|++|++++++.....+.+...+ ...++..+.+|++|.. +.
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999888765433322222221 2456888999998752 24
Q ss_pred CCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~~iV~vSS~~vyg 235 (263)
.+|+||||||....... .+.+++.+++|+.|+.++++.+... + .++|+++|...+.
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~ 151 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN 151 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC
Confidence 58999999997543222 2246788999999999999987543 2 3788888865543
No 114
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.63 E-value=3.1e-15 Score=147.82 Aligned_cols=127 Identities=16% Similarity=0.176 Sum_probs=92.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEE-EEecCCccchhhhhhhcCCCceEEEEcccccccc--CCCcEEEEccCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVI-VIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL--LEVDQIYHLACP 190 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~-~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~--~~iD~Vi~~Ag~ 190 (263)
...|+||||||+||||++|+++|.++|++|. ...+. . +.+.....+ .++|+|||+|+.
T Consensus 378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~l-~------------------d~~~v~~~i~~~~pd~Vih~Aa~ 438 (668)
T PLN02260 378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGRL-E------------------DRSSLLADIRNVKPTHVFNAAGV 438 (668)
T ss_pred CCCceEEEECCCchHHHHHHHHHHhCCCeEEeecccc-c------------------cHHHHHHHHHhhCCCEEEECCcc
Confidence 4557899999999999999999999999884 22110 0 001111111 268999999997
Q ss_pred CCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCC------CCCCcCCCCCCCCCCCCcCccccc
Q 024766 191 ASPV---HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP------LEHPQKETYWGNVNPIGELLAATA 261 (263)
Q Consensus 191 ~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~------~~~~~~E~~~~~~~p~~~~~~Y~~ 261 (263)
.... ..+.++...+++|+.|+.+++++|++.++++|++||.+||+.. .+.++.|++ .|..+.+.||.
T Consensus 439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~----~~~~~~~~Yg~ 514 (668)
T PLN02260 439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEED----KPNFTGSFYSK 514 (668)
T ss_pred cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCC----CCCCCCChhhH
Confidence 6432 2355788999999999999999999999888999999998742 134778875 23334578998
Q ss_pred cC
Q 024766 262 VV 263 (263)
Q Consensus 262 sK 263 (263)
||
T Consensus 515 sK 516 (668)
T PLN02260 515 TK 516 (668)
T ss_pred HH
Confidence 87
No 115
>PRK08643 acetoin reductase; Validated
Probab=99.62 E-value=4.5e-15 Score=129.14 Aligned_cols=118 Identities=16% Similarity=0.150 Sum_probs=87.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCCCc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEVD 182 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~iD 182 (263)
+|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++.++.+|++++. +.++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 6799999999999999999999999999999987544333222221 1356788999998762 24699
Q ss_pred EEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCcce
Q 024766 183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEV 233 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~--~~iV~vSS~~v 233 (263)
+||||||........ +++++.+++|+.|+.++++.+.+ .+ .+||++||...
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 142 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG 142 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc
Confidence 999999874332222 23577899999999887777643 22 48999999654
No 116
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.62 E-value=4.7e-15 Score=127.89 Aligned_cols=122 Identities=18% Similarity=0.170 Sum_probs=90.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhh---hhc--CCCceEEEEccccccc-----------
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHF--RNPRFELIRHDVVEPI----------- 177 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~--~~~~v~~~~~Dv~~~~----------- 177 (263)
+++|+++||||+|+||++++++|+++|++|++++|......+... ... ...++.++.+|+.+..
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998765333222221 111 2346888999998762
Q ss_pred -cCCCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHH-----HcC-CeEEEEcCcceec
Q 024766 178 -LLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK-----RVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 178 -~~~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~-----~~~-~~iV~vSS~~vyg 235 (263)
...+|+||||||......+. +++...+++|+.|+.++++++. +.+ .+||++||...+.
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~ 152 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR 152 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC
Confidence 24689999999976533322 2356788999999999999987 334 3899999976653
No 117
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.62 E-value=3.4e-15 Score=129.68 Aligned_cols=122 Identities=17% Similarity=0.122 Sum_probs=90.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...... ...++..+.+|+.+.. +..
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 567899999999999999999999999999999997654333222221 2346888999998752 246
Q ss_pred CcEEEEccCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vyg 235 (263)
+|+||||||...... ..+++++.+++|+.++.++++++ .+.+ .+||++||...+.
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~ 149 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG 149 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc
Confidence 899999999743222 12356778999999998877654 3333 3899999987665
No 118
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.62 E-value=4e-15 Score=127.89 Aligned_cols=122 Identities=17% Similarity=0.154 Sum_probs=91.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~ 179 (263)
+++|+++||||+|+||++++++|+++|++|+++.++.....+...... ...++.++.+|+.+.. +.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 456799999999999999999999999999887776554433332221 2456888999997762 24
Q ss_pred CCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vyg 235 (263)
++|+|||+||....... .+.+...+++|+.++.++++.+ ++.+. ++|++||...+.
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~ 148 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP 148 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC
Confidence 68999999996544332 2245778999999999999887 34444 999999987664
No 119
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.62 E-value=3.4e-15 Score=135.95 Aligned_cols=122 Identities=15% Similarity=0.114 Sum_probs=91.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+..++...+.. ...++..+.+|++|.. +..
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 567899999999999999999999999999999987654433332221 2456788999998762 346
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vyg 235 (263)
+|++|||||......+. +++++.+++|+.|+.++.+.+ ++.+ .+||++||...|.
T Consensus 86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~ 149 (334)
T PRK07109 86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR 149 (334)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc
Confidence 99999999975433322 245677899999987766554 4443 3899999988775
No 120
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.62 E-value=2.9e-15 Score=129.32 Aligned_cols=121 Identities=21% Similarity=0.159 Sum_probs=91.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...... ...++.++.+|+.|.. +..
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999997554333332222 2345888999998752 236
Q ss_pred CcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCccee
Q 024766 181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVY 234 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vy 234 (263)
+|+||||||....... .+++.+.+++|+.++.++++.+. +.+ .+||++||...+
T Consensus 84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~ 146 (251)
T PRK12826 84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP 146 (251)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh
Confidence 8999999987554222 23457789999999999998873 333 389999998766
No 121
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.62 E-value=3.1e-15 Score=129.28 Aligned_cols=120 Identities=16% Similarity=0.151 Sum_probs=89.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+. ..++..+.+|+.+.. +..+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL--GESALVIRADAGDVAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 45789999999999999999999999999999988654333222222 345778888887642 2468
Q ss_pred cEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH---cCCeEEEEcC-cceec
Q 024766 182 DQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR---VGAKFLLTST-SEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~---~~~~iV~vSS-~~vyg 235 (263)
|+||||||........ +++++.+++|+.|+.++++++.+ .+.++|++|| .+.||
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~ 143 (249)
T PRK06500 82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG 143 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC
Confidence 9999999975433322 34678899999999999999864 2347777777 45565
No 122
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.62 E-value=4.3e-15 Score=129.42 Aligned_cols=121 Identities=16% Similarity=0.144 Sum_probs=90.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++.++.+|+++.. +..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999999999887554333222221 2346778899998762 246
Q ss_pred CcEEEEccCCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCccee
Q 024766 181 VDQIYHLACPASPVHYK---YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVY 234 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vy 234 (263)
+|+||||||......++ +++++.+++|+.|+.++++.+. +.+ .+||++||.+..
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 150 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE 150 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc
Confidence 89999999975433332 3456779999999999999875 233 389999997543
No 123
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.62 E-value=3.8e-15 Score=128.81 Aligned_cols=122 Identities=18% Similarity=0.154 Sum_probs=91.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+...+...... ...++.++.+|+.+.. +..
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999999999987654333222221 2356888999998752 235
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~vyg 235 (263)
+|+||||||........ +.+++.+++|+.++.++++++. +.+. +||++||.+.+.
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~ 144 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARV 144 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhcc
Confidence 89999999864332222 2346779999999999888764 3443 899999987765
No 124
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.62 E-value=3.8e-15 Score=129.81 Aligned_cols=121 Identities=15% Similarity=0.109 Sum_probs=90.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEcccccc------------ccC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~------------~~~ 179 (263)
.+++|+++||||+|+||.+++++|++.|++|+++++... .+...... ...++..+.+|+.+. .+.
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG 84 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 367899999999999999999999999999998876432 11111111 134677889999875 224
Q ss_pred CCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~~iV~vSS~~vyg 235 (263)
.+|++|||||....... .+++++.+++|+.|+.++++++.. .+ .+||++||...+.
T Consensus 85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 150 (253)
T PRK08993 85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ 150 (253)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc
Confidence 69999999997543322 235788899999999999888643 22 3899999987765
No 125
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.62 E-value=1.9e-15 Score=130.82 Aligned_cols=118 Identities=15% Similarity=0.159 Sum_probs=88.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~ 179 (263)
+++|+++||||+||||++++++|+++|++|++++|+.....+.+...+ ...++..+.+|++++. +.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999886543322222211 1345788899998762 13
Q ss_pred CCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
++|+||||||.... ...++...+++|+.|+.++++.+.+. +.+||++||...
T Consensus 84 ~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~ 138 (248)
T PRK07806 84 GLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQA 138 (248)
T ss_pred CCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchh
Confidence 69999999985322 23346677899999999999999764 238999999643
No 126
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.62 E-value=3.1e-15 Score=134.65 Aligned_cols=123 Identities=20% Similarity=0.158 Sum_probs=97.9
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEcccccc-----------
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEP----------- 176 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~----------- 176 (263)
.....+++++||||+++||.+++++|+.+|.+|++.+|+.+...+....+. ....+.++.+|+.+.
T Consensus 30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208|consen 30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 345677899999999999999999999999999999998755554444443 366788899999876
Q ss_pred -ccCCCcEEEEccCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCcce
Q 024766 177 -ILLEVDQIYHLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEV 233 (263)
Q Consensus 177 -~~~~iD~Vi~~Ag~~~~~~--~~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~v 233 (263)
....+|++|||||+..+.. ..+..+..|++|+.|++.|.+++ +... .|||++||...
T Consensus 110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 2345999999999877654 34568999999999988877765 4444 59999999765
No 127
>PRK09242 tropinone reductase; Provisional
Probab=99.62 E-value=3.3e-15 Score=130.18 Aligned_cols=123 Identities=9% Similarity=0.044 Sum_probs=93.0
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEcccccc------------c
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEP------------I 177 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~------------~ 177 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.. ...++..+.+|+.++ .
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999987554333222221 245788889999875 2
Q ss_pred cCCCcEEEEccCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCcceec
Q 024766 178 LLEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vyg 235 (263)
+..+|+||||||...... ..+++++.+.+|+.|+.++++++. +.+ .+||++||.+.+.
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~ 152 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT 152 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC
Confidence 356999999999643222 223567889999999999988874 333 4899999987665
No 128
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.62 E-value=4.5e-15 Score=129.93 Aligned_cols=123 Identities=15% Similarity=0.093 Sum_probs=91.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEccccccc------------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI------------ 177 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~------------ 177 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.++..+...+.. ...++..+.+|++|..
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999997655433322221 2346778899998762
Q ss_pred cCCCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCcceec
Q 024766 178 LLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vyg 235 (263)
+..+|+||||||......+. +++.+.+++|+.+..++++.+. +.+ .+||++||...+.
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 151 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ 151 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC
Confidence 34689999999975433322 2467788999999888777653 333 3999999976553
No 129
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.62 E-value=4.1e-15 Score=129.13 Aligned_cols=122 Identities=19% Similarity=0.112 Sum_probs=88.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ....+..+.+|+.+.. +.
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG 84 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3567899999999999999999999999999999987554333322221 1345778889997652 24
Q ss_pred CCcEEEEccCCCCC-CC----CCCCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCccee
Q 024766 180 EVDQIYHLACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vy 234 (263)
.+|+||||||.... .. ..++++..+++|+.++.++++++ ++.+ .+||++||...+
T Consensus 85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 149 (252)
T PRK07035 85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV 149 (252)
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc
Confidence 58999999985321 11 12235678999999999888776 3333 389999986443
No 130
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.62 E-value=6.6e-15 Score=127.43 Aligned_cols=121 Identities=15% Similarity=0.050 Sum_probs=87.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-ecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVI-DNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
+.+++++||||+|+||++++++|+++|++|+++ .|+.+...+...+.. ...++.++.+|++++. +.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999998774 554433222222211 2456888999998862 23
Q ss_pred CCcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcCccee
Q 024766 180 EVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~----~~~-~iV~vSS~~vy 234 (263)
.+|+||||||........+ .+...+++|+.++.++++++.+ .+. +||++||...+
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 145 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI 145 (250)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence 5899999998654333322 2455689999999999888754 333 89999997554
No 131
>PRK05855 short chain dehydrogenase; Validated
Probab=99.62 E-value=3.3e-15 Score=143.96 Aligned_cols=123 Identities=15% Similarity=0.077 Sum_probs=94.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
...+++++||||+|+||++++++|+++|++|++++|+.++..+....+. ...++.++.+|++|+. ..
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG 391 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4567899999999999999999999999999999997655443333221 2346889999998862 23
Q ss_pred CCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~--~~iV~vSS~~vyg 235 (263)
.+|+||||||......+. ++++..+++|+.|+.++++++. +.+ .+||++||.+.|.
T Consensus 392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 457 (582)
T PRK05855 392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA 457 (582)
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 599999999986543322 2467788999999999888753 333 4899999998876
No 132
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.62 E-value=4.5e-15 Score=146.70 Aligned_cols=140 Identities=19% Similarity=0.209 Sum_probs=99.8
Q ss_pred cchhhhhhccccccccccccCcccCCCCccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc
Q 024766 82 HALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF 161 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~ 161 (263)
.||.+|+.+. .+++....+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+..
T Consensus 394 eyw~~e~~kl--------------~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~ 459 (676)
T TIGR02632 394 EYWPLEEAKL--------------RRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN 459 (676)
T ss_pred hhhhhhHHhh--------------ccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5777777652 23444456789999999999999999999999999999999987554333222221
Q ss_pred ---CCCceEEEEccccccc------------cCCCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----
Q 024766 162 ---RNPRFELIRHDVVEPI------------LLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA---- 218 (263)
Q Consensus 162 ---~~~~v~~~~~Dv~~~~------------~~~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a---- 218 (263)
....+..+.+|+++.. +.++|+||||||........ ++++..+++|+.|..++++.+
T Consensus 460 ~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m 539 (676)
T TIGR02632 460 GQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQM 539 (676)
T ss_pred hhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2345778899998762 24699999999975433332 235677899999988876554
Q ss_pred HHcC--CeEEEEcCcc-eec
Q 024766 219 KRVG--AKFLLTSTSE-VYG 235 (263)
Q Consensus 219 ~~~~--~~iV~vSS~~-vyg 235 (263)
++.+ .+||++||.. +++
T Consensus 540 ~~~~~~g~IV~iSS~~a~~~ 559 (676)
T TIGR02632 540 REQGLGGNIVFIASKNAVYA 559 (676)
T ss_pred HhcCCCCEEEEEeChhhcCC
Confidence 3333 4899999964 444
No 133
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.62 E-value=6e-15 Score=128.34 Aligned_cols=120 Identities=15% Similarity=0.094 Sum_probs=90.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++..+.+|+.+.. +..
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 568899999999999999999999999999999987654443333322 1346778889998762 245
Q ss_pred CcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcce
Q 024766 181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEV 233 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~v 233 (263)
+|+||||||....... .+++++.+++|+.|+.++++.+.+ .+ .+||++||...
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 148 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS 148 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh
Confidence 8999999997543222 234677899999999998887653 23 48999999743
No 134
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.62 E-value=3.2e-15 Score=130.85 Aligned_cols=119 Identities=20% Similarity=0.198 Sum_probs=87.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------------ccCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------------~~~~i 181 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+ +... ...++..+.+|+.+. .+..+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQE-LEAA-HGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI 80 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhh-cCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 467899999999999999999999999999999987543332 2221 234577888999775 12468
Q ss_pred cEEEEccCCCCCC-CC---C-----CCHHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCccee
Q 024766 182 DQIYHLACPASPV-HY---K-----YNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVY 234 (263)
Q Consensus 182 D~Vi~~Ag~~~~~-~~---~-----~~~~~~~~~Nv~gt~~ll~~a~~~----~~~iV~vSS~~vy 234 (263)
|++|||||..... .. . +++++.+++|+.|+.++++++.+. +.++|++||...+
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~ 146 (262)
T TIGR03325 81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF 146 (262)
T ss_pred CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee
Confidence 9999999964211 11 1 246788999999999999987542 2378888886543
No 135
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.62 E-value=6.4e-15 Score=128.01 Aligned_cols=122 Identities=11% Similarity=0.030 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-Cccchhhhhhhc-CCCceEEEEccccccc--------------
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF-FTGRKDNLVHHF-RNPRFELIRHDVVEPI-------------- 177 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~-~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~-------------- 177 (263)
+++|+++||||+|+||.+++++|++.|++|++.+++ .+...+...+.. ....+..+.+|+.+..
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 457899999999999999999999999999887543 332222222221 2345667788886641
Q ss_pred --c--CCCcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcceec
Q 024766 178 --L--LEVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYG 235 (263)
Q Consensus 178 --~--~~iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~vyg 235 (263)
. ..+|+||||||........+ .+++++++|+.|+.++++++.+. ..+||++||.+.+.
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~ 150 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI 150 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc
Confidence 1 26999999999753322222 35778899999999999887543 23999999987654
No 136
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.61 E-value=4.7e-15 Score=131.97 Aligned_cols=120 Identities=17% Similarity=0.096 Sum_probs=88.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC---------ccchhhhhhhc-CCCceEEEEcccccc-------
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF---------TGRKDNLVHHF-RNPRFELIRHDVVEP------- 176 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~---------~~~~~~~~~~~-~~~~v~~~~~Dv~~~------- 176 (263)
+++|+++||||+++||.+++++|+++|++|++++++. +...+...++. ...++..+.+|+++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 5688999999999999999999999999999988764 22222222221 234677889999875
Q ss_pred -----ccCCCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----c---C----CeEEEEcCcce
Q 024766 177 -----ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----V---G----AKFLLTSTSEV 233 (263)
Q Consensus 177 -----~~~~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~---~----~~iV~vSS~~v 233 (263)
.+..+|++|||||+...... .+++++.+++|+.|+.++++++.. . + .+||++||.+.
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 160 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG 160 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence 23569999999997543322 234678899999999998887632 1 1 38999999654
No 137
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.61 E-value=4.9e-15 Score=133.11 Aligned_cols=123 Identities=16% Similarity=0.023 Sum_probs=91.3
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhh-hhhc-CCCceEEEEcccccc-----------cc
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL-VHHF-RNPRFELIRHDVVEP-----------IL 178 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~-~~~~-~~~~v~~~~~Dv~~~-----------~~ 178 (263)
..+++|+++||||+|+||.+++++|+++|++|+++++......+.. .++. ...++..+.+|+.+. .+
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 4578899999999999999999999999999999987543322222 2221 245688899999875 13
Q ss_pred CCCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----c--------CCeEEEEcCccee
Q 024766 179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----V--------GAKFLLTSTSEVY 234 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~--------~~~iV~vSS~~vy 234 (263)
..+|+||||||......+ .++++..+++|+.|+.++++++.. . ..+||++||.+.+
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 159 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGL 159 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccc
Confidence 469999999997554322 234677899999999999987632 1 1389999997654
No 138
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.61 E-value=6.4e-15 Score=129.00 Aligned_cols=115 Identities=19% Similarity=0.193 Sum_probs=88.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
.+++|+++||||+|+||.+++++|+++|++|++++++..... ..++..+.+|++++. +..
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFGR 77 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467889999999999999999999999999999988654321 236778899998762 246
Q ss_pred CcEEEEccCCCCCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVH-------------YKYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~-------------~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~~iV~vSS~~vyg 235 (263)
+|+||||||...... ..+++++.+++|+.|+.++++++... + .+||++||...+.
T Consensus 78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 150 (266)
T PRK06171 78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE 150 (266)
T ss_pred CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence 899999999643211 12245778999999999999887542 2 3899999976553
No 139
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.61 E-value=8.6e-15 Score=130.57 Aligned_cols=123 Identities=19% Similarity=0.179 Sum_probs=93.0
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------c
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L 178 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~ 178 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.....+.....+ ...++.++.+|+.+.. .
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999887543322222222 2346788999998752 2
Q ss_pred CCCcEEEEccCCCCCC-CC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcceec
Q 024766 179 LEVDQIYHLACPASPV-HY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYG 235 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~-~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~vyg 235 (263)
.++|+||||||..... .. .+++.+.+++|+.|+.++++++.+. +.+||++||.+.|.
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~ 187 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYE 187 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccC
Confidence 3689999999964332 11 1245778999999999999998653 34899999988775
No 140
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.61 E-value=3.5e-15 Score=131.76 Aligned_cols=123 Identities=18% Similarity=0.238 Sum_probs=88.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCCCCCC-CC
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVH-YK 197 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~~~~-~~ 197 (263)
|+||||+||||++++++|+++|++|++++|+......... ..+..+..+...+.+.++|+|||+||...... +.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----EGYKPWAPLAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----eeeecccccchhhhcCCCCEEEECCCCCcccccCC
Confidence 6899999999999999999999999999997654322110 11111112223345678999999998643211 11
Q ss_pred -CCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEcCcceecCCCCCCcCCCC
Q 024766 198 -YNPVKTIKTNVMGTLNMLGLAKRVGA---KFLLTSTSEVYGDPLEHPQKETY 246 (263)
Q Consensus 198 -~~~~~~~~~Nv~gt~~ll~~a~~~~~---~iV~vSS~~vyg~~~~~~~~E~~ 246 (263)
..+...+++|+.++.++++++++.+. .+|+.||.++||.....+++|+.
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~ 128 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEED 128 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCccc
Confidence 23567789999999999999999874 45556667889977667888885
No 141
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.61 E-value=5.5e-15 Score=127.99 Aligned_cols=118 Identities=17% Similarity=0.200 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCC-
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE- 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~- 180 (263)
+++|+++||||+|+||+++++.|+++|++|+++.++.....+.+.... ..++.++.+|+.++. +..
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 467899999999999999999999999999887664333322232222 246788899997752 123
Q ss_pred CcEEEEccCCCCC------CCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcc
Q 024766 181 VDQIYHLACPASP------VHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSE 232 (263)
Q Consensus 181 iD~Vi~~Ag~~~~------~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~ 232 (263)
+|+||||||.... ... .+++.+.+++|+.|+.++++++.. .+ .+||++||..
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~ 148 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNL 148 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcc
Confidence 9999999986321 111 123567799999999999998752 33 3899999864
No 142
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.61 E-value=7.5e-15 Score=128.08 Aligned_cols=122 Identities=17% Similarity=0.130 Sum_probs=91.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+..+.....+. ...++.++.+|++|+. ...
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 567899999999999999999999999999999987544332222221 2346788999998752 236
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV-----GA-KFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~-----~~-~iV~vSS~~vyg 235 (263)
+|+||||||........ +.+++.+++|+.++.++++++.+. +. +||++||.+.+.
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~ 154 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLG 154 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhcc
Confidence 89999999864332222 235677899999999999987543 33 899999976543
No 143
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.61 E-value=6.7e-15 Score=127.86 Aligned_cols=119 Identities=20% Similarity=0.178 Sum_probs=89.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+. .+... ......+..+.+|+++.. +..
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3578899999999999999999999999999999986542 22122 223445678899998762 246
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcce
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEV 233 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~v 233 (263)
+|+||||||........ +++++.+++|+.|+.++++++.. .+ .+||++||...
T Consensus 90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 151 (255)
T PRK06841 90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAG 151 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 89999999975433222 24567899999999999998754 23 48999999653
No 144
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.61 E-value=6.9e-15 Score=127.29 Aligned_cols=120 Identities=17% Similarity=0.205 Sum_probs=90.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEccccccc------------cCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+|+++||||+|+||++++++|+++|++|++++|+.+...+...... ...++.++.+|++++. +..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999999987654433222211 2457888999998762 346
Q ss_pred CcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcce-ec
Q 024766 181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEV-YG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~v-yg 235 (263)
+|+||||||+...... .+.+++.+++|+.|+.++++++. +.+. +||++||... +|
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 146 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG 146 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC
Confidence 9999999997544332 22356778999999999888763 3343 8999999644 44
No 145
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.61 E-value=8.8e-15 Score=131.98 Aligned_cols=121 Identities=14% Similarity=0.109 Sum_probs=89.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
++|+++||||+++||.+++++|+++| ++|++++|+.++..+...+.. ....+..+.+|+++.. ...
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 46799999999999999999999999 999999987654433222221 2346778889997751 246
Q ss_pred CcEEEEccCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHH----HHcC---CeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLA----KRVG---AKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~---~~iV~vSS~~vyg 235 (263)
+|++|||||+..... ..+.++..+++|+.|+..+++++ ++.+ .+||++||...+.
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNT 148 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcccc
Confidence 999999999743211 12346778999999998887765 3332 4999999987764
No 146
>PRK12742 oxidoreductase; Provisional
Probab=99.61 E-value=8.6e-15 Score=125.72 Aligned_cols=117 Identities=15% Similarity=0.123 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc--------cCCCcEEE
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQIY 185 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~--------~~~iD~Vi 185 (263)
+++|+++||||+|+||++++++|+++|++|+++.++.....+.+... ..+..+.+|+.+.. ...+|+||
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE---TGATAVQTDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH---hCCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence 56789999999999999999999999999988766433222222221 13567778887652 24589999
Q ss_pred EccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 186 HLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 186 ~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
||||....... .+++++.+++|+.|+.+++..+.+. +.+||++||...
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 99997543221 2346788999999999998766543 248999999653
No 147
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.61 E-value=1e-14 Score=127.45 Aligned_cols=122 Identities=14% Similarity=0.082 Sum_probs=88.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------c
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L 178 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~ 178 (263)
.+++|+++||||+|+||.+++++|+++|++|+++.|+.....+...+.+ ...++..+.+|+++.. +
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3678999999999999999999999999999988875433322222211 2346778899998762 2
Q ss_pred CCCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHH----HHHcC--CeEEEEcCccee
Q 024766 179 LEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGL----AKRVG--AKFLLTSTSEVY 234 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~----a~~~~--~~iV~vSS~~vy 234 (263)
..+|+||||||........ +.+++.+++|+.++.++++. +++.+ .+||++||...+
T Consensus 84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~ 149 (261)
T PRK08936 84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ 149 (261)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 4589999999975443322 34667899999998776554 34443 389999996433
No 148
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.61 E-value=8.9e-15 Score=126.11 Aligned_cols=121 Identities=23% Similarity=0.198 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~ 179 (263)
+++|+++||||+|+||++++++|+++|++|+++.++.....+...+.+ ...++.++.+|+.++. +.
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 567899999999999999999999999999888776443322222221 2456888999998752 24
Q ss_pred CCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCccee
Q 024766 180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~vy 234 (263)
++|+||||||....... .+++++++++|+.|+.++++.+.+. +.+||++||.+.+
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~ 144 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA 144 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc
Confidence 69999999997543222 2246678899999999999887653 2389999987554
No 149
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.61 E-value=7.5e-15 Score=140.52 Aligned_cols=120 Identities=16% Similarity=0.168 Sum_probs=94.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-------C---CCceEEEEcccccc-----c
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-------R---NPRFELIRHDVVEP-----I 177 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-------~---~~~v~~~~~Dv~~~-----~ 177 (263)
..++|+|+||||+|+||++++++|+++|++|++++|+.+.......+.. + ..++.++.+|+.+. .
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 4578899999999999999999999999999999997665433222110 1 13578899999875 3
Q ss_pred cCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCccee
Q 024766 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vy 234 (263)
+.++|+||||+|.... ...++...+++|+.|+.++++++++.+. +||++||.+++
T Consensus 157 LggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~ 212 (576)
T PLN03209 157 LGNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTN 212 (576)
T ss_pred hcCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhc
Confidence 5789999999986432 1124567789999999999999998886 99999998763
No 150
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.60 E-value=8.1e-15 Score=127.89 Aligned_cols=121 Identities=14% Similarity=0.183 Sum_probs=90.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------c
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L 178 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~ 178 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+ ... +.+.+.+ ...++.++.+|+.+.. +
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNW-DETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3678999999999999999999999999999999886 222 2222221 2356888999998762 2
Q ss_pred CCCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCcceec
Q 024766 179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vyg 235 (263)
..+|++|||||....... .+++++.+++|+.++.++++++. +.+ .+||++||...+.
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 155 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ 155 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc
Confidence 368999999997543222 22467889999999888887764 333 3899999987654
No 151
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.60 E-value=5.9e-15 Score=128.40 Aligned_cols=120 Identities=15% Similarity=0.087 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+..++...+.. ...++..+.+|+.++. +..
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999999999987654433322221 2346778899998762 347
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCcce
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEV 233 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~--~~iV~vSS~~v 233 (263)
+|+||||||........ +.+++.+++|+.|+.++++++. +.+ .+||++||...
T Consensus 87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~ 149 (253)
T PRK05867 87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSG 149 (253)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHh
Confidence 99999999975433322 2456778999999999988864 222 37999988653
No 152
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.60 E-value=5.2e-15 Score=127.63 Aligned_cols=121 Identities=12% Similarity=0.031 Sum_probs=90.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
++|+++||||+|+||..++++|+++|++|++++|+.+...+...... ...++.++.+|+++.. +..+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999987654333222211 2356888999998762 2459
Q ss_pred cEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCcceec
Q 024766 182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vyg 235 (263)
|+||||||....... .++++..+++|+.++.++++.+ ++.+ .+||++||...++
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 147 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN 147 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc
Confidence 999999996543222 1246777899999999988775 3333 4899999987775
No 153
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.1e-14 Score=128.55 Aligned_cols=122 Identities=11% Similarity=0.049 Sum_probs=90.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
..+|+++||||+|+||++++++|+++|++|++++|+.+...+...... ...++.++.+|+++.. +..
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 556799999999999999999999999999999886543332222111 1346788899998762 246
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~vyg 235 (263)
+|+||||||........ +++++.+++|+.|+.++++.+.+ .+ .+||++||...|.
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~ 151 (274)
T PRK07775 88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR 151 (274)
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC
Confidence 89999999975433322 23566789999999999888642 33 3899999987765
No 154
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.60 E-value=4.8e-15 Score=129.35 Aligned_cols=118 Identities=18% Similarity=0.122 Sum_probs=88.6
Q ss_pred CCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------------ccC
Q 024766 114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILL 179 (263)
Q Consensus 114 ~~~k~vlVTGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------------~~~ 179 (263)
+++|+++||||+ ++||++++++|+++|++|++++|+ +...+...+. ....+..+.+|++++ .+.
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKL-VDEEDLLVECDVASDESIERAFATIKERVG 82 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhh-ccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 578999999999 799999999999999999999886 2223333332 234677899999876 235
Q ss_pred CCcEEEEccCCCCC----CCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 180 EVDQIYHLACPASP----VHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~----~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
.+|++|||||.... ... .++++..+++|+.|+..+++.+... +.+||++||.+.
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~ 147 (252)
T PRK06079 83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS 147 (252)
T ss_pred CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence 69999999997532 111 1246778999999999998887543 248999998654
No 155
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.60 E-value=1.1e-14 Score=126.71 Aligned_cols=123 Identities=13% Similarity=0.088 Sum_probs=92.1
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------c
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------L 178 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~ 178 (263)
..+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.. ...++.++.+|+.++. +
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 34688999999999999999999999999999999997654333222221 2346889999998762 2
Q ss_pred CCCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcCccee
Q 024766 179 LEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVY 234 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~~-~iV~vSS~~vy 234 (263)
..+|+||||||........ +++++.+.+|+.|+.++++.+.+ .+. +||++||...+
T Consensus 87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~ 151 (256)
T PRK06124 87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQ 151 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhc
Confidence 4589999999975433222 24667899999999999977643 343 89999997543
No 156
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.60 E-value=7e-15 Score=129.44 Aligned_cols=122 Identities=19% Similarity=0.159 Sum_probs=90.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEccccccc------------c
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI------------L 178 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~------------~ 178 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++.++.+|+.++. +
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 567899999999999999999999999999999987554333322221 1246788899998762 2
Q ss_pred CCCcEEEEccCCCCCC-C----CCCCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCcceec
Q 024766 179 LEVDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYG 235 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~~iV~vSS~~vyg 235 (263)
..+|+||||||..... . ..+++...+++|+.++.++++++.+. + .+||++||.+.+.
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~ 151 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN 151 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC
Confidence 3689999999864321 1 12235678899999999998876432 2 3899999987654
No 157
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.60 E-value=8e-15 Score=127.48 Aligned_cols=123 Identities=12% Similarity=0.090 Sum_probs=91.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.. ...++.++.+|+.+.. +.
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 3678999999999999999999999999999999987654333222221 2346788899997651 24
Q ss_pred CCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----c---------CCeEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----V---------GAKFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~---------~~~iV~vSS~~vyg 235 (263)
.+|+||||||........ ++++.++++|+.|+.++++.+.. . +.++|++||...+.
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 158 (258)
T PRK06949 86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR 158 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC
Confidence 689999999975433222 34677899999999999887642 1 23899999986653
No 158
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.60 E-value=9.4e-15 Score=128.42 Aligned_cols=119 Identities=19% Similarity=0.093 Sum_probs=89.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCCCcE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEVDQ 183 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~iD~ 183 (263)
|+++||||+|+||++++++|+++|++|++++|+.+...+...+.. ...++.++.+|+.+.. ...+|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999987655443333222 2456788999998752 246999
Q ss_pred EEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcceec
Q 024766 184 IYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vyg 235 (263)
||||||........+ ++++.+++|+.++.++++.+ ++.+. +||++||...+.
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~ 141 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM 141 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC
Confidence 999999765433332 35667899999988877764 45554 999999986654
No 159
>PRK09135 pteridine reductase; Provisional
Probab=99.60 E-value=9.7e-15 Score=125.91 Aligned_cols=133 Identities=15% Similarity=0.158 Sum_probs=94.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEccccccc------------cC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~------------~~ 179 (263)
++++++||||+|+||++++++|+++|++|++++|+.....+.....+ ....+.++.+|+++.. +.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45799999999999999999999999999999986443333222211 2345788899998752 23
Q ss_pred CCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCcceecCCCCCCcCCCCCCCCC
Q 024766 180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVYGDPLEHPQKETYWGNVN 251 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~iV~vSS~~vyg~~~~~~~~E~~~~~~~ 251 (263)
.+|+||||||......+ .++++.++++|+.|+.++++++.+. +..++++++... . .
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~-----~ 148 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA-----------E-----R 148 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh-----------c-----C
Confidence 58999999996543222 2246778999999999999998542 235666655321 1 2
Q ss_pred CCCcCccccccC
Q 024766 252 PIGELLAATAVV 263 (263)
Q Consensus 252 p~~~~~~Y~~sK 263 (263)
|..+...|+.||
T Consensus 149 ~~~~~~~Y~~sK 160 (249)
T PRK09135 149 PLKGYPVYCAAK 160 (249)
T ss_pred CCCCchhHHHHH
Confidence 455666788776
No 160
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.2e-14 Score=127.02 Aligned_cols=119 Identities=13% Similarity=0.121 Sum_probs=86.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCcc-chhhhhhhc--CCCceEEEEccccccc-----------cC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTG-RKDNLVHHF--RNPRFELIRHDVVEPI-----------LL 179 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~-~~~~~~~~~--~~~~v~~~~~Dv~~~~-----------~~ 179 (263)
++++++||||+|+||++++++|+++| ++|++++|+.+. ..+...+.. ...++.++.+|+.|.. ..
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 56799999999999999999999995 899999998765 333322221 2336888999997752 13
Q ss_pred CCcEEEEccCCCCCCC-CCCCH---HHHHHHHHHHHHHH----HHHHHHcCC-eEEEEcCcce
Q 024766 180 EVDQIYHLACPASPVH-YKYNP---VKTIKTNVMGTLNM----LGLAKRVGA-KFLLTSTSEV 233 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~-~~~~~---~~~~~~Nv~gt~~l----l~~a~~~~~-~iV~vSS~~v 233 (263)
++|++|||+|...... ...+. .+.+++|+.|+.++ ++.+++.+. +||++||...
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g 149 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAG 149 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhh
Confidence 6999999998754321 11122 35689999998875 445555554 9999999754
No 161
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.60 E-value=1.5e-14 Score=124.63 Aligned_cols=121 Identities=15% Similarity=0.051 Sum_probs=90.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++++++||||+|+||.+++++|+++|++|++++|+.....+...+.. ...++.++.+|+.+.. +..
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999999999999987654333222221 2346888899997762 246
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCccee
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVY 234 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~vy 234 (263)
+|+||||||........ +++++.+++|+.|+.++++.+.. .+ .++|++||...+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~ 147 (239)
T PRK07666 85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ 147 (239)
T ss_pred ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhc
Confidence 99999999975433221 23567789999999999888753 33 389999996544
No 162
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.1e-14 Score=127.36 Aligned_cols=119 Identities=11% Similarity=0.102 Sum_probs=89.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc-----------cCCCc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----------LLEVD 182 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~-----------~~~iD 182 (263)
+++++++||||+|+||.+++++|+++|++|++++|+.+...+...+.....++.++.+|+.|.. +..+|
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4578999999999999999999999999999999875544333222222457888999998862 24689
Q ss_pred EEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcc
Q 024766 183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSE 232 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~ 232 (263)
+||||||........ +.+.+.+++|+.|+.++++.+.+ .+ .+||++||..
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~ 141 (263)
T PRK09072 83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTF 141 (263)
T ss_pred EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChh
Confidence 999999975433222 23567789999999999988753 22 3899998854
No 163
>PRK12743 oxidoreductase; Provisional
Probab=99.60 E-value=1.1e-14 Score=126.94 Aligned_cols=117 Identities=15% Similarity=0.107 Sum_probs=87.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+|+++||||+|+||.+++++|+++|++|+++.++.....+...... ...++.++.+|+.+.. +..+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999999988765443332222221 2457889999998752 2468
Q ss_pred cEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCcc
Q 024766 182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSE 232 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~~iV~vSS~~ 232 (263)
|+||||||....... .+++++.+.+|+.|+.++++++.. .+ .+||++||..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 142 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVH 142 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecc
Confidence 999999997543222 234678899999999999987643 22 4899999964
No 164
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.2e-14 Score=128.29 Aligned_cols=119 Identities=12% Similarity=0.016 Sum_probs=88.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchh------hh-hhhc-CCCceEEEEccccccc--------
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD------NL-VHHF-RNPRFELIRHDVVEPI-------- 177 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~------~~-~~~~-~~~~v~~~~~Dv~~~~-------- 177 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+...+ .. .+.. ...++..+.+|+++..
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 467899999999999999999999999999999987543211 11 1111 2346788899998762
Q ss_pred ----cCCCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----c-CCeEEEEcCcc
Q 024766 178 ----LLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----V-GAKFLLTSTSE 232 (263)
Q Consensus 178 ----~~~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~-~~~iV~vSS~~ 232 (263)
+.++|+||||||........ +++++.+++|+.|+.++++++.. . +.+||++||..
T Consensus 84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~ 151 (273)
T PRK08278 84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPL 151 (273)
T ss_pred HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCch
Confidence 23699999999975443332 23577889999999999998853 2 24899998853
No 165
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.59 E-value=1.2e-14 Score=127.62 Aligned_cols=122 Identities=17% Similarity=0.178 Sum_probs=89.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++.++.+|++++. +.
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG 85 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3578899999999999999999999999999999987554332222221 1345678889998752 24
Q ss_pred CCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCccee
Q 024766 180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vy 234 (263)
.+|+||||||....... .+++++.+++|+.|+.++++++.+ .+.+||++||...+
T Consensus 86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~ 148 (264)
T PRK07576 86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAF 148 (264)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhc
Confidence 58999999985432222 224567789999999999988753 33499999997554
No 166
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.59 E-value=1.6e-14 Score=126.17 Aligned_cols=119 Identities=15% Similarity=0.121 Sum_probs=88.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.. ..+...+.. ...++.++.+|+.+.. +..
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56789999999999999999999999999999998753 222222221 2346788899998752 246
Q ss_pred CcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcce
Q 024766 181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEV 233 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~v 233 (263)
+|+||||||........+ .+++.+++|+.|+.++++.+.+ .+ .+||++||...
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 144 (263)
T PRK08226 83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG 144 (263)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence 899999999754433322 3456789999999999988643 23 38999999643
No 167
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.59 E-value=1.3e-14 Score=125.64 Aligned_cols=120 Identities=16% Similarity=0.083 Sum_probs=88.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCCCc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEVD 182 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~iD 182 (263)
+|+++||||+|+||++++++|+++|++|++++|+.+...+...... ...++..+.+|+.+.. +..+|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999997544332222211 2346888999998763 34589
Q ss_pred EEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcceec
Q 024766 183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vyg 235 (263)
+||||||........ +++++.+++|+.|+.++++.+ ++.+. ++|++||...+.
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~ 142 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV 142 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC
Confidence 999999875443221 234677889999988888876 44444 899999976554
No 168
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.59 E-value=1.5e-14 Score=126.75 Aligned_cols=123 Identities=11% Similarity=0.019 Sum_probs=91.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.++..+...... ...++..+.+|++++. +.
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 3577899999999999999999999999999999887654433332221 2346888999998762 24
Q ss_pred CCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCc-ceec
Q 024766 180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTS-EVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~-~vyg 235 (263)
.+|+||||||........ +++++.+++|+.|+..+++.+.. .+ .+||++||. +.++
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 152 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG 152 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC
Confidence 589999999975543322 24677789999999988887643 33 489999995 4444
No 169
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.59 E-value=9.9e-15 Score=127.36 Aligned_cols=103 Identities=19% Similarity=0.227 Sum_probs=77.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEc
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL 187 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~ 187 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+.....+. ..... ...+.+|+++. .+.++|++|||
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~---~~~~~-~~~~~~D~~~~~~~~~~~~~iDilVnn 86 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES---NDESP-NEWIKWECGKEESLDKQLASLDVLILN 86 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh---hccCC-CeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence 45778999999999999999999999999999999875222111 11111 24667888765 35679999999
Q ss_pred cCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHH
Q 024766 188 ACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAK 219 (263)
Q Consensus 188 Ag~~~~~~~-~~~~~~~~~~Nv~gt~~ll~~a~ 219 (263)
||....... .+++++.+++|+.|+.++++++.
T Consensus 87 AG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 119 (245)
T PRK12367 87 HGINPGGRQDPENINKALEINALSSWRLLELFE 119 (245)
T ss_pred CccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 997433222 34578889999999999999864
No 170
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.59 E-value=1.2e-14 Score=125.24 Aligned_cols=121 Identities=14% Similarity=0.134 Sum_probs=89.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++++++||||+|+||++++++|+++|+.|++.+|+.+...+..... ..++.++.+|+.+.. +..+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL--GERVKIFPANLSDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999999999999999999999999888877654433322221 346788889998752 3469
Q ss_pred cEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCc-ceecC
Q 024766 182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTS-EVYGD 236 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~-~vyg~ 236 (263)
|+||||||....... .+++++.+++|+.++.++++++.+ .+ .+||++||. +.++.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 146 (245)
T PRK12936 82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN 146 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC
Confidence 999999997543221 234677899999999999887642 23 489999996 45553
No 171
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.59 E-value=1.1e-14 Score=126.40 Aligned_cols=116 Identities=16% Similarity=0.138 Sum_probs=85.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCcEE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQI 184 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD~V 184 (263)
|+++||||+|+||.+++++|+++|++|++++|+.+...+.. ... ..++.++.+|+.+.. +.++|+|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELK-DEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 47999999999999999999999999999998755433222 211 346788899997752 2369999
Q ss_pred EEccCCCCCC-C----CCCCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCccee
Q 024766 185 YHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 185 i~~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vy 234 (263)
|||||..... . ..+++++++++|+.|+.++++.+ ++.+. +||++||.+.+
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 138 (248)
T PRK10538 79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS 138 (248)
T ss_pred EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC
Confidence 9999864321 1 22346778999999987777765 34443 89999997544
No 172
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.59 E-value=1.6e-14 Score=125.53 Aligned_cols=119 Identities=13% Similarity=0.150 Sum_probs=88.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCCCc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEVD 182 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~iD 182 (263)
+|+++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|++++. +..+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 5799999999999999999999999999999987554333222221 1356888999998762 24689
Q ss_pred EEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCccee
Q 024766 183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVY 234 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~~iV~vSS~~vy 234 (263)
+||||||....... .+++++.+++|+.|+.++++++.+ .+ .+||++||...+
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~ 142 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAW 142 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhc
Confidence 99999986432222 223677899999999999998742 22 389999987544
No 173
>PRK08264 short chain dehydrogenase; Validated
Probab=99.59 E-value=1.1e-14 Score=125.16 Aligned_cols=116 Identities=20% Similarity=0.208 Sum_probs=88.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCCCceEEEEccccccc--------cCCCcEE
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQI 184 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~--------~~~iD~V 184 (263)
+++++++||||+|+||++++++|+++|+ +|++++|+.++..+ ...++.++.+|+.+.. ...+|+|
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 77 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEAASDVTIL 77 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 4678999999999999999999999999 99999987554322 2346788899998752 2358999
Q ss_pred EEccCCC-CCCCC----CCCHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcceec
Q 024766 185 YHLACPA-SPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 185 i~~Ag~~-~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~vyg 235 (263)
||+||.. ..... .+++...+++|+.++.++++++. +.+. +||++||...+.
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~ 138 (238)
T PRK08264 78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV 138 (238)
T ss_pred EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc
Confidence 9999973 22222 23456778999999999999864 3333 899999977664
No 174
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.59 E-value=1.1e-14 Score=124.93 Aligned_cols=122 Identities=15% Similarity=0.083 Sum_probs=90.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+.+++++||||+|+||++++++|+++|++|++++|+.....+..........+..+.+|+.+.. +..+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3468999999999999999999999999999999876543333222222256888999987652 2369
Q ss_pred cEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCcceec
Q 024766 182 DQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vyg 235 (263)
|+|||+||........ +++++.+++|+.|+.++++++.+ .+.+||++||...+.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 145 (237)
T PRK07326 84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN 145 (237)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc
Confidence 9999999875433222 23567799999999999888753 223899999976543
No 175
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.59 E-value=1.1e-14 Score=125.97 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=85.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccccc---------CCCcEEEE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL---------LEVDQIYH 186 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~---------~~iD~Vi~ 186 (263)
+++++||||+|+||.+++++|+++|++|++++|+.+..++. .. ...++.++.+|+++... ..+|.+||
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDEL-HT--QSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HH--hcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 46899999999999999999999999999999875433222 11 12457788999987621 23799999
Q ss_pred ccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcc
Q 024766 187 LACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSE 232 (263)
Q Consensus 187 ~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~ 232 (263)
|||....... .+++++++++|+.|+.++++++... +.++|++||..
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~ 130 (240)
T PRK06101 78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIA 130 (240)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechh
Confidence 9985432221 1235678999999999999998753 45899998853
No 176
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.59 E-value=1.4e-14 Score=125.16 Aligned_cols=117 Identities=10% Similarity=0.062 Sum_probs=87.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEcccccccc---------CCCcEE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPIL---------LEVDQI 184 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~~---------~~iD~V 184 (263)
||+++||||+|+||.+++++|+++|++|++++|+.++..+...+.. ...++.++.+|+.+... ..+|++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 4789999999999999999999999999999998655433332221 24578899999987621 247999
Q ss_pred EEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcc
Q 024766 185 YHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSE 232 (263)
Q Consensus 185 i~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~ 232 (263)
|||||........ +++.+.+++|+.|+.++++++.. .+ .+||++||..
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 137 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVA 137 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 9999865433222 23457789999999999888643 33 3899999864
No 177
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.59 E-value=1.1e-14 Score=127.59 Aligned_cols=120 Identities=17% Similarity=0.038 Sum_probs=86.5
Q ss_pred cCCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEcccccc------------c
Q 024766 113 GRRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------I 177 (263)
Q Consensus 113 ~~~~k~vlVTGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~------------~ 177 (263)
.+++|+++||||+ ++||++++++|+++|++|++++|+.+. .+.+.+.. .......+.+|+++. .
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 85 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE 85 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence 3578999999998 599999999999999999999886432 11122211 112345788999876 2
Q ss_pred cCCCcEEEEccCCCCC----CC----CCCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 178 LLEVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
+..+|++|||||.... .. ..+++++.+++|+.|+.++++.+... +.+||++||.+.
T Consensus 86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~ 152 (258)
T PRK07533 86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGA 152 (258)
T ss_pred cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence 3569999999997432 11 12346788999999999999886442 348999998643
No 178
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.58 E-value=1.6e-14 Score=127.28 Aligned_cols=114 Identities=14% Similarity=0.054 Sum_probs=85.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCcE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQ 183 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD~ 183 (263)
+|+++||||+|+||++++++|+++|++|++++|+.+...+. . ...+..+.+|+.+.. ..++|+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-A----AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H----HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 47899999999999999999999999999999875433221 1 124677888987751 246999
Q ss_pred EEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCccee
Q 024766 184 IYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVY 234 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vy 234 (263)
||||||........ ++++..+++|+.|+.++++.+.. ...+||++||...+
T Consensus 76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~ 134 (274)
T PRK05693 76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGV 134 (274)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCcccc
Confidence 99999975433222 34677899999999999888643 22489999996543
No 179
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.58 E-value=1e-14 Score=128.94 Aligned_cols=119 Identities=13% Similarity=0.035 Sum_probs=85.8
Q ss_pred CCCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcC-CCceEEEEcccccc------------cc
Q 024766 114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEP------------IL 178 (263)
Q Consensus 114 ~~~k~vlVTGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~------------~~ 178 (263)
+++|+++||||++ +||++++++|+++|++|++++|+... .+...+... ......+.+|++|. .+
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5788999999997 99999999999999999999876421 222222211 11234678999876 23
Q ss_pred CCCcEEEEccCCCCCC----C----CCCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 179 LEVDQIYHLACPASPV----H----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~----~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
..+|++|||||..... . ..+++++.+++|+.|+.++++++... +.+||++||.+.
T Consensus 84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~ 149 (271)
T PRK06505 84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGS 149 (271)
T ss_pred CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCc
Confidence 5699999999975321 1 12346788999999999998876432 248999999754
No 180
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.58 E-value=1.8e-14 Score=126.05 Aligned_cols=121 Identities=14% Similarity=0.131 Sum_probs=86.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhh-hhhc--CCCceEEEEccccccc------------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL-VHHF--RNPRFELIRHDVVEPI------------ 177 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~-~~~~--~~~~v~~~~~Dv~~~~------------ 177 (263)
.+++|+++||||+++||++++++|+++|++|++++|+.....+.. .+.. ...++.++.+|++|+.
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED 84 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999998876433322222 2211 2357889999998762
Q ss_pred cCCCcEEEEccCCCCC------CCC----CCCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCcce
Q 024766 178 LLEVDQIYHLACPASP------VHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEV 233 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~------~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~v 233 (263)
+..+|+||||||.... ..+ .+.+...+++|+.+...+.+.+. +.+ .+||++||...
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 155 (260)
T PRK08416 85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGN 155 (260)
T ss_pred cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccc
Confidence 3469999999986421 111 12356678999999887766653 333 38999999654
No 181
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.58 E-value=2.1e-14 Score=124.23 Aligned_cols=122 Identities=15% Similarity=0.020 Sum_probs=87.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccch-hhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
+++++++||||+|+||++++++|+++|++|+++.++..... +...... ...++..+.+|++++. +.
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 35689999999999999999999999999988775432222 1111111 1345677888987652 24
Q ss_pred CCcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~vyg 235 (263)
.+|+||||||........+ ..++.+++|+.|+.++++++.+. ..+||++||...|.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 146 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR 146 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC
Confidence 6899999999744333221 23577899999999999987653 23899999987764
No 182
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.58 E-value=1.1e-14 Score=129.10 Aligned_cols=118 Identities=16% Similarity=0.084 Sum_probs=85.3
Q ss_pred CCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEcccccc------------c
Q 024766 114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------I 177 (263)
Q Consensus 114 ~~~k~vlVTGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~------------~ 177 (263)
+++|+++||||+ ++||.+++++|+++|++|++++|+.+ ..+.+.+.. .... ..+.+|++|. .
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~ 80 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD 80 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999997 79999999999999999999988642 112222211 1122 5688999886 2
Q ss_pred cCCCcEEEEccCCCCC----CCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 178 LLEVDQIYHLACPASP----VHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~----~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
+..+|++|||||.... ..+ .+++++.+++|+.|+.++++++... +.+||++||.+.
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~ 147 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG 147 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence 3569999999997432 111 2346788999999999998887542 248999998643
No 183
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.58 E-value=8.2e-15 Score=132.70 Aligned_cols=120 Identities=14% Similarity=0.107 Sum_probs=88.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEcccccc----------ccC--
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEP----------ILL-- 179 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~----------~~~-- 179 (263)
.|++++||||+|+||++++++|+++|++|++++|+.++.++...++. ...++..+.+|+.+. .+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999999998765544333321 134667778888642 112
Q ss_pred CCcEEEEccCCCCCC--CCC----CCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCccee
Q 024766 180 EVDQIYHLACPASPV--HYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~--~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vy 234 (263)
++|++|||||..... .+. ++.++.+++|+.|+.++++++. +.+ .+||++||.+.+
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~ 197 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAI 197 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 366999999975421 122 2356789999999999888864 334 499999997664
No 184
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.58 E-value=1.9e-14 Score=125.48 Aligned_cols=120 Identities=23% Similarity=0.397 Sum_probs=91.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------cc-CCCcEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------IL-LEVDQIY 185 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------~~-~~iD~Vi 185 (263)
...+|+|+||||+|+||+.++++|+++|++|+++.|+.+....... ....+.++.+|+.+. .+ .++|+||
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence 4567899999999999999999999999999999887543222111 124688888998763 23 4799999
Q ss_pred EccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCC
Q 024766 186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLE 239 (263)
Q Consensus 186 ~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~ 239 (263)
|++|..... ++...+.+|+.|+.++++++++.+. +||++||.++||...+
T Consensus 91 ~~~g~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~ 141 (251)
T PLN00141 91 CATGFRRSF----DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMG 141 (251)
T ss_pred ECCCCCcCC----CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcc
Confidence 999853211 2223357899999999999998876 9999999999985433
No 185
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.58 E-value=2.1e-14 Score=123.57 Aligned_cols=114 Identities=18% Similarity=0.111 Sum_probs=84.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCcE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQ 183 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD~ 183 (263)
+|+++||||+|+||.+++++|+++|++|++++|+.+...+.+.. ..+.++.+|+.+.. +..+|+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 77 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ----AGAQCIQADFSTNAGIMAFIDELKQHTDGLRA 77 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence 57999999999999999999999999999999876543222221 23677889997752 245999
Q ss_pred EEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC---CeEEEEcCcce
Q 024766 184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG---AKFLLTSTSEV 233 (263)
Q Consensus 184 Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~---~~iV~vSS~~v 233 (263)
+|||||....... .+++++.+++|+.++..+.+.+.+ .+ .+||++||...
T Consensus 78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~ 138 (236)
T PRK06483 78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV 138 (236)
T ss_pred EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh
Confidence 9999996433221 234678899999999887776543 22 38999988643
No 186
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.58 E-value=2.1e-14 Score=125.77 Aligned_cols=121 Identities=12% Similarity=0.049 Sum_probs=87.7
Q ss_pred cCCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCcc--chhhhhhhcCCCceEEEEcccccc------------
Q 024766 113 GRRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTG--RKDNLVHHFRNPRFELIRHDVVEP------------ 176 (263)
Q Consensus 113 ~~~~k~vlVTGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~--~~~~~~~~~~~~~v~~~~~Dv~~~------------ 176 (263)
.+++|+++||||+ ++||.+++++|+++|++|++++|+... ..+.+.......++..+.+|++|+
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE 83 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 3578899999997 899999999999999999998875321 112222222345677889999876
Q ss_pred ccCCCcEEEEccCCCCC----CCC-C---CCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 177 ILLEVDQIYHLACPASP----VHY-K---YNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 177 ~~~~iD~Vi~~Ag~~~~----~~~-~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
.+..+|++|||||.... ... + +.+...+++|+.++.++++.+... +.+||++||...
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 23569999999996531 111 1 235677899999999888876543 248999999654
No 187
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.58 E-value=1.8e-14 Score=123.37 Aligned_cols=121 Identities=19% Similarity=0.138 Sum_probs=90.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.....+...+. ....+.++.+|+.|.. +.++
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGV-PADALRIGGIDLVDPQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHH-hhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence 46789999999999999999999999999999999765544433332 2345677788887642 2469
Q ss_pred cEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcceec
Q 024766 182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~vyg 235 (263)
|+|||+||....... .+.+++.+++|+.++.++++++. +.+. +||++||...++
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 146 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALK 146 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhcc
Confidence 999999986543221 12346678999999999988864 3333 999999988775
No 188
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.58 E-value=2.2e-14 Score=125.01 Aligned_cols=122 Identities=15% Similarity=0.145 Sum_probs=89.0
Q ss_pred CCCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCCcc---------c-hhhhhhhc--CCCceEEEEccccccc--
Q 024766 114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTG---------R-KDNLVHHF--RNPRFELIRHDVVEPI-- 177 (263)
Q Consensus 114 ~~~k~vlVTGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~---------~-~~~~~~~~--~~~~v~~~~~Dv~~~~-- 177 (263)
+++|+++||||+| +||.+++++|+++|++|++++|++.. . ...+.... ...++.++.+|+++..
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 4678999999995 89999999999999999999887211 0 00011111 1346888999998752
Q ss_pred ----------cCCCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCcceec
Q 024766 178 ----------LLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYG 235 (263)
Q Consensus 178 ----------~~~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~----~-~~iV~vSS~~vyg 235 (263)
+..+|+||||||........ +++++.+++|+.|+.++++++.+. + .+||++||...++
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 159 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG 159 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence 24689999999875433322 235677999999999999987542 2 3899999987665
No 189
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.58 E-value=1.9e-14 Score=124.06 Aligned_cols=119 Identities=18% Similarity=0.106 Sum_probs=88.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc--------cCCCcEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQI 184 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~--------~~~iD~V 184 (263)
.+++++++||||+|+||.++++.|+++|++|++++|+.+...+... ...+..+.+|+.+.. ...+|+|
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~d~v 81 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG----ETGCEPLRLDVGDDAAIRAALAAAGAFDGL 81 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HhCCeEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4677899999999999999999999999999999987543322211 123567788887752 2358999
Q ss_pred EEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEcCcceec
Q 024766 185 YHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYG 235 (263)
Q Consensus 185 i~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~~iV~vSS~~vyg 235 (263)
|||||....... .+++++.+.+|+.++.++++++.+. + .+||++||...+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~ 142 (245)
T PRK07060 82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV 142 (245)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC
Confidence 999987543221 2246677889999999999887542 2 4899999976554
No 190
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.58 E-value=3.1e-15 Score=129.87 Aligned_cols=142 Identities=25% Similarity=0.392 Sum_probs=113.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCC-ccchhhhhhhcCCCceEEEEccccccc-------cCCCcEEEE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFF-TGRKDNLVHHFRNPRFELIRHDVVEPI-------LLEVDQIYH 186 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~-------~~~iD~Vi~ 186 (263)
++++||||+||||+..+..+...- ++.+.++... -.....+.+....+++.++.+|+.+.. .+++|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 799999999999999999999873 4666665431 112344444546789999999998872 246999999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCcceecCCCCCCcC-CCCCCCCCCCCcCccccccC
Q 024766 187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHPQK-ETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS~~vyg~~~~~~~~-E~~~~~~~p~~~~~~Y~~sK 263 (263)
.|+..+.....-++-...+.|+.++..+++.++..|. +||++||..|||+.++.+.. |. .+.+|.+.|++||
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~-----s~~nPtnpyAasK 161 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEA-----SLLNPTNPYAASK 161 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccccc-----ccCCCCCchHHHH
Confidence 9987666555567778889999999999999999974 89999999999998887776 77 5778888888876
No 191
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2e-14 Score=125.38 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=84.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhh---hc--CCCceEEEEccccccc-----------
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH---HF--RNPRFELIRHDVVEPI----------- 177 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~---~~--~~~~v~~~~~Dv~~~~----------- 177 (263)
+++|+++||||+|+||.+++++|+++|++|++++++.....+...+ .+ ...++..+.+|+++..
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999988777654322222211 11 1346888999998761
Q ss_pred -cCCCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcC
Q 024766 178 -LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTST 230 (263)
Q Consensus 178 -~~~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS 230 (263)
+.++|+||||||....... .+++++.+++|+.|+.++++++.+. +.++++++|
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~s 146 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVT 146 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEec
Confidence 2469999999997443222 2246788999999999999988653 236776643
No 192
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.58 E-value=2.5e-14 Score=124.63 Aligned_cols=120 Identities=18% Similarity=0.116 Sum_probs=88.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEccccccc------------cCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+|+++||||+|+||.+++++|+++|++|++++|+.....+...... ...++..+.+|+++.. +..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999987554433322221 1246889999998751 246
Q ss_pred CcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCcc-eec
Q 024766 181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSE-VYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~----~~--~~iV~vSS~~-vyg 235 (263)
+|+||||||........+ ++++.+++|+.|+.++++++.+ .+ .+||++||.. .++
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~ 147 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG 147 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC
Confidence 899999999755433222 3567789999999988877643 34 3899999854 444
No 193
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.57 E-value=3e-14 Score=123.45 Aligned_cols=113 Identities=18% Similarity=0.159 Sum_probs=87.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+. . .. ...++..+.+|+.++. +..+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~-~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------L-TQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETGPL 77 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------h-hh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5678999999999999999999999999999999864 1 11 2446788899998752 2458
Q ss_pred cEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCccee
Q 024766 182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVY 234 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~vy 234 (263)
|+||||||....... .+++...+++|+.++.++++++.. .+ .+||++||....
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~ 139 (252)
T PRK08220 78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH 139 (252)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc
Confidence 999999997543332 234678899999999999988743 33 389999997543
No 194
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.57 E-value=1.3e-14 Score=126.85 Aligned_cols=118 Identities=12% Similarity=0.093 Sum_probs=84.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCcEE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQI 184 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD~V 184 (263)
|+++||||+|+||++++++|+++|++|++++|+.+...+...+.....++..+.+|+++.. +..+|+|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4799999999999999999999999999999876544333333322236778899998752 3569999
Q ss_pred EEccCCCCCC--CC----CCCHHHHHHHHHHHHHHHHHHH----H-HcC-CeEEEEcCccee
Q 024766 185 YHLACPASPV--HY----KYNPVKTIKTNVMGTLNMLGLA----K-RVG-AKFLLTSTSEVY 234 (263)
Q Consensus 185 i~~Ag~~~~~--~~----~~~~~~~~~~Nv~gt~~ll~~a----~-~~~-~~iV~vSS~~vy 234 (263)
|||||..... .. .+++.+.+.+|+.++..+...+ . +.+ .+||++||.+.+
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~ 142 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK 142 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC
Confidence 9999964321 11 1234566788998877665543 2 222 489999998665
No 195
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.57 E-value=1.6e-14 Score=125.14 Aligned_cols=121 Identities=18% Similarity=0.122 Sum_probs=87.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccc--c------------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVE--P------------ 176 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~--~------------ 176 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++.++.+|+.+ .
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999997654333222221 23356666677642 1
Q ss_pred ccCCCcEEEEccCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcce
Q 024766 177 ILLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEV 233 (263)
Q Consensus 177 ~~~~iD~Vi~~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~v 233 (263)
.+..+|+||||||...... ..+.+++.+++|+.|+.++++++. +.+. +||++||...
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~ 155 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVG 155 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhh
Confidence 2346999999998643321 123467889999999999888764 3343 8999999644
No 196
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.57 E-value=2.2e-14 Score=124.67 Aligned_cols=118 Identities=19% Similarity=0.167 Sum_probs=85.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhh-cCCCceEEEEccccccc-----c-CCCcEEEEcc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI-----L-LEVDQIYHLA 188 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~v~~~~~Dv~~~~-----~-~~iD~Vi~~A 188 (263)
+|+++||||+|+||++++++|+++|++|++++|+.....+..... .....+.++.+|+.+.. + .++|+|||||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 578999999999999999999999999999998754332211111 12345788899998762 2 3799999999
Q ss_pred CCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcce
Q 024766 189 CPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEV 233 (263)
Q Consensus 189 g~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~v 233 (263)
|........ +.++..+++|+.|+.++.+.+ ++.+. +||++||...
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~ 135 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAG 135 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhh
Confidence 975433322 235677899999988776654 34443 8999999644
No 197
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.57 E-value=1e-14 Score=118.65 Aligned_cols=118 Identities=18% Similarity=0.213 Sum_probs=89.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC--Cccchhhhhhhc-CCCceEEEEcccccc------------ccCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNF--FTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILLE 180 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~--~~~~~~~~~~~~-~~~~v~~~~~Dv~~~------------~~~~ 180 (263)
|+++||||+|+||.+++++|+++|. .|+++.|+ .+...+...+.. ...++.++.+|+.++ ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6899999999999999999999966 66777776 222222222221 357899999999876 2346
Q ss_pred CcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCccee
Q 024766 181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vy 234 (263)
+|++|||||........+ ++++.+++|+.+...+.+++...+. +||++||....
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 139 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV 139 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc
Confidence 999999999876444433 3568899999999999999877443 99999997554
No 198
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.57 E-value=1.8e-14 Score=130.00 Aligned_cols=107 Identities=19% Similarity=0.271 Sum_probs=85.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccCCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA 191 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag~~ 191 (263)
|+|+|||||||||++++++|+++|++|++++|+.+.... .....++++.+|+.|+ .+.++|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~-----l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF-----LKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh-----HhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 479999999999999999999999999999987533211 1223688899999876 456899999998532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcce
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~v 233 (263)
..++...+++|+.|+.+++++|++.++ +||++||.++
T Consensus 76 -----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~ 113 (317)
T CHL00194 76 -----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNA 113 (317)
T ss_pred -----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccc
Confidence 123445678999999999999999997 9999999644
No 199
>PRK06484 short chain dehydrogenase; Validated
Probab=99.57 E-value=1.3e-14 Score=139.02 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=91.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
.+.+|+++||||+|+||.+++++|+++|++|++++|+.+...+...+. ..++..+.+|++|+. +..
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL--GDEHLSVQADITDEAAVESAFAQIQARWGR 343 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999999999998755433322222 345667889998762 245
Q ss_pred CcEEEEccCCCCC-CCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcceec
Q 024766 181 VDQIYHLACPASP-VHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~-~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~vyg 235 (263)
+|+||||||.... ... .+++++.+++|+.|+.++++.+... +.+||++||.+.+.
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 406 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL 406 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC
Confidence 9999999997532 111 2346788999999999999987653 24899999976553
No 200
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.57 E-value=3.5e-14 Score=122.59 Aligned_cols=122 Identities=20% Similarity=0.187 Sum_probs=91.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.. ...++.++.+|+.+.. +..
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999999999999887554433322221 2346888999998762 146
Q ss_pred CcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~----~-~~iV~vSS~~vyg 235 (263)
+|+||||||........ +.++..+++|+.++.++++.+.+. + .+||++||...+.
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 148 (250)
T PRK12939 85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW 148 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc
Confidence 99999999975443222 235677899999999998887432 2 3899999976543
No 201
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.57 E-value=2e-14 Score=125.18 Aligned_cols=118 Identities=20% Similarity=0.123 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.....+...+. ...++.+|+.++. ..++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----GGLFVPTDVTDEDAVNALFDTAAETYGSV 80 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 56889999999999999999999999999999998654322222221 1256788887752 2468
Q ss_pred cEEEEccCCCCCC--CCC----CCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCc-ceec
Q 024766 182 DQIYHLACPASPV--HYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTS-EVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~--~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~-~vyg 235 (263)
|+||||||..... ... +.+++.+++|+.|+.++++.+. +.+ .+||++||. +++|
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g 146 (255)
T PRK06057 81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMG 146 (255)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccC
Confidence 9999999865321 111 2367889999999988877753 333 389999885 5666
No 202
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.56 E-value=1.4e-14 Score=122.35 Aligned_cols=117 Identities=23% Similarity=0.235 Sum_probs=91.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhh--hhhhcCCCceEEEEcccccc------------cc
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--LVHHFRNPRFELIRHDVVEP------------IL 178 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~--~~~~~~~~~v~~~~~Dv~~~------------~~ 178 (263)
.++||++++|||.|+||.+++++|+++|..+.+++.+.+..++. ++.+.....+.++.+|++++ .+
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 35799999999999999999999999999888888776654433 34444567899999999886 34
Q ss_pred CCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHH----HH-HcC---CeEEEEcCcce
Q 024766 179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGL----AK-RVG---AKFLLTSTSEV 233 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~----a~-~~~---~~iV~vSS~~v 233 (263)
..+|++||+||+.. +.+++.++.+|+.|..|-..+ +. +.| .-||++||+.-
T Consensus 82 g~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G 140 (261)
T KOG4169|consen 82 GTIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG 140 (261)
T ss_pred CceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence 56999999999765 567999999999997664444 43 232 27999999743
No 203
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.56 E-value=4.2e-14 Score=122.20 Aligned_cols=119 Identities=19% Similarity=0.128 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-ccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF-TGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~-~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
++|+++||||+|+||++++++|+++|++|+++.++. ....+...+.. ...++..+.+|+.|.. +..
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999988865432 22222222211 2345777889998752 246
Q ss_pred CcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcce
Q 024766 181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEV 233 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~v 233 (263)
+|+||||||....... .+++++.+++|+.++.++.+.+. +.+. +||++||...
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 143 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNG 143 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhc
Confidence 9999999997543222 23467789999999888777653 3443 8999999643
No 204
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.56 E-value=2.4e-14 Score=125.65 Aligned_cols=120 Identities=11% Similarity=0.003 Sum_probs=84.7
Q ss_pred CCCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEcccccc------------cc
Q 024766 114 RRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------IL 178 (263)
Q Consensus 114 ~~~k~vlVTGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~------------~~ 178 (263)
+++|+++|||| +++||++++++|+++|++|++.+|.. ...+.+.+.. .......+.+|+.|+ .+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 57889999997 67999999999999999999987652 2222232222 112345788999876 23
Q ss_pred CCCcEEEEccCCCCCC----C-CC----CCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCccee
Q 024766 179 LEVDQIYHLACPASPV----H-YK----YNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVY 234 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~----~-~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vy 234 (263)
..+|++|||||+.... . .+ +.++..+++|+.++..+.+.+.. .+.+||++||.+.+
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~ 151 (261)
T PRK08690 83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAV 151 (261)
T ss_pred CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccc
Confidence 5699999999975431 1 11 23566789999999888877543 22489999987554
No 205
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.56 E-value=3.9e-14 Score=121.62 Aligned_cols=113 Identities=13% Similarity=0.103 Sum_probs=86.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------ccCCCcEEEEc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHL 187 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------~~~~iD~Vi~~ 187 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.... ...++..+.+|+.++ ....+|+||||
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ 74 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--------LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNT 74 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--------cCCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence 5678999999999999999999999999999998864321 123577889999775 23569999999
Q ss_pred cCCCCC-CC----CCCCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCccee
Q 024766 188 ACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVY 234 (263)
Q Consensus 188 Ag~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~vy 234 (263)
||.... .. ..+++++.+++|+.|+.++++++.. .+ .+||++||...+
T Consensus 75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 131 (235)
T PRK06550 75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASF 131 (235)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc
Confidence 986421 11 1224678899999999999998743 23 389999997554
No 206
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.56 E-value=2.7e-14 Score=125.30 Aligned_cols=119 Identities=13% Similarity=0.039 Sum_probs=84.8
Q ss_pred CCCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCC-CceEEEEcccccc------------cc
Q 024766 114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVVEP------------IL 178 (263)
Q Consensus 114 ~~~k~vlVTGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~------------~~ 178 (263)
+++|+++||||++ +||.+++++|+++|++|++.+|+. ...+.+.+.... .....+.+|++|+ .+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678999999997 899999999999999999988763 222222222111 1223568999876 23
Q ss_pred CCCcEEEEccCCCCC----CCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 179 LEVDQIYHLACPASP----VHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~----~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
..+|++|||||.... ... .+++++.+++|+.+...+++.+... +.+||++||.+.
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~ 150 (260)
T PRK06603 85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGA 150 (260)
T ss_pred CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcc
Confidence 569999999996432 111 1246788999999999998876432 248999999654
No 207
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.56 E-value=6.1e-14 Score=120.55 Aligned_cols=124 Identities=19% Similarity=0.215 Sum_probs=91.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~ 179 (263)
+++|+++||||+|+||+++++.|+++|++|+++.|+.....+.....+ ...++..+.+|+.+.. +.
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG 82 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999888876553322222221 2456788889998762 23
Q ss_pred CCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCc-ceecCC
Q 024766 180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTS-EVYGDP 237 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~----~-~~iV~vSS~-~vyg~~ 237 (263)
++|+||||||........ +.+++.+.+|+.++.++++++... + .+||++||. +++|.+
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~ 150 (248)
T PRK05557 83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP 150 (248)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC
Confidence 689999999975443222 235677899999999999887543 3 379999995 456543
No 208
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.56 E-value=2.2e-14 Score=141.00 Aligned_cols=123 Identities=12% Similarity=0.058 Sum_probs=93.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++.++.+|+.|.. +.
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4678999999999999999999999999999999997654433332221 2456888999998762 24
Q ss_pred CCcEEEEccCCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVHY------KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~------~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vyg 235 (263)
.+|+||||||....... .++++..+++|+.|+.++++++. +.+ .+||++||.+.|.
T Consensus 448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 514 (657)
T PRK07201 448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT 514 (657)
T ss_pred CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC
Confidence 69999999996432221 12467889999999999877753 344 3899999988875
No 209
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.56 E-value=2.8e-14 Score=126.12 Aligned_cols=119 Identities=15% Similarity=0.048 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcC-CCceEEEEcccccc------------cc
Q 024766 114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEP------------IL 178 (263)
Q Consensus 114 ~~~k~vlVTGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~------------~~ 178 (263)
+++|+++||||+ ++||.+++++|+++|++|++++|+.. ..+.+.+... ......+.+|++++ .+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 467899999997 89999999999999999998877521 2222222211 12345688999875 23
Q ss_pred CCCcEEEEccCCCCC----CCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 179 LEVDQIYHLACPASP----VHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~----~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
..+|++|||||.... ..+ .+++++.+++|+.|+.++++.+... +.+||++||.+.
T Consensus 87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~ 152 (272)
T PRK08159 87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGA 152 (272)
T ss_pred CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccc
Confidence 569999999997532 111 2346788999999999999987543 248999998644
No 210
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.56 E-value=4e-14 Score=123.38 Aligned_cols=118 Identities=21% Similarity=0.248 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++++++||||+|+||.+++++|+++|++|++++|+.+...+. .+.....++.++.+|+.++. +.++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAAT-AARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5678999999999999999999999999999999875433322 22222236788899998762 2468
Q ss_pred cEEEEccCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCcc
Q 024766 182 DQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSE 232 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~--~~iV~vSS~~ 232 (263)
|+|||+||...... ..+++.+.+++|+.++.++++.+. ..+ .+|+++||.+
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~ 149 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVA 149 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccc
Confidence 99999999752211 123467889999999999888763 333 3577887754
No 211
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.56 E-value=3.8e-14 Score=122.17 Aligned_cols=120 Identities=17% Similarity=0.149 Sum_probs=86.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEcccccc--------------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP-------------- 176 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~-------------- 176 (263)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ....+..+.+|+.+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 3577899999999999999999999999999999998654433322221 233456677777542
Q ss_pred cc-CCCcEEEEccCCCCCC-CCC----CCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcc
Q 024766 177 IL-LEVDQIYHLACPASPV-HYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSE 232 (263)
Q Consensus 177 ~~-~~iD~Vi~~Ag~~~~~-~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~ 232 (263)
.+ ..+|+||||||..... .+. +++.+.+++|+.|+.++++++.+ .+ .++|++||..
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~ 149 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESH 149 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 12 4689999999964321 111 23566789999999998887643 33 4899998854
No 212
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.55 E-value=2e-14 Score=122.98 Aligned_cols=116 Identities=11% Similarity=0.077 Sum_probs=87.4
Q ss_pred EEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc--------cCCCcEEEEccCCC
Q 024766 120 VVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQIYHLACPA 191 (263)
Q Consensus 120 lVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~--------~~~iD~Vi~~Ag~~ 191 (263)
+||||+|+||++++++|+++|++|++++|+.+...+.........+++++.+|++++. ...+|++|||||..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 5999999999999999999999999999875443332222212456888999998762 24589999999975
Q ss_pred CCCCCC----CCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEcCcceec
Q 024766 192 SPVHYK----YNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 192 ~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~-~~iV~vSS~~vyg 235 (263)
....+. +++++.+++|+.++.+++++....+ .+||++||.+.|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~ 129 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR 129 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC
Confidence 433222 3467889999999999999654444 3999999987775
No 213
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.55 E-value=5.8e-14 Score=120.54 Aligned_cols=120 Identities=16% Similarity=0.148 Sum_probs=88.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+............ ...++.++.+|+.|+. +..
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 356799999999999999999999999999999987654332222221 2346788889998762 245
Q ss_pred CcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcce
Q 024766 181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEV 233 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~v 233 (263)
+|+|||+||....... .+.+.+.+++|+.++.++++.+. +.+. +||++||...
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~ 144 (246)
T PRK05653 83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSG 144 (246)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence 7999999986544222 12356778999999999988874 4443 9999999643
No 214
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.55 E-value=5.2e-14 Score=130.77 Aligned_cols=118 Identities=24% Similarity=0.350 Sum_probs=90.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhh--hhhh-cCCCceEEEEccccccc-----cC----C
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--LVHH-FRNPRFELIRHDVVEPI-----LL----E 180 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~--~~~~-~~~~~v~~~~~Dv~~~~-----~~----~ 180 (263)
..++++|+||||+|+||++++++|+++|++|++++|+..+.... .... .....++++.+|++|.. +. +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 45678999999999999999999999999999999976442210 0111 12346889999998862 22 5
Q ss_pred CcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg 235 (263)
+|+||||+|.... .....+++|+.++.++++++++.+. +||++||.++|+
T Consensus 137 ~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~ 187 (390)
T PLN02657 137 VDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK 187 (390)
T ss_pred CcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC
Confidence 9999999974221 1224467999999999999999986 899999998875
No 215
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.55 E-value=5e-14 Score=122.21 Aligned_cols=119 Identities=22% Similarity=0.158 Sum_probs=86.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCCCcE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEVDQ 183 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~iD~ 183 (263)
|+++||||+|+||.+++++|+++|++|++++|+.....+...+.. ...++..+.+|++|+. +..+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999999999987543333222221 2446888999998762 235899
Q ss_pred EEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCcc-eec
Q 024766 184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSE-VYG 235 (263)
Q Consensus 184 Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~--~~iV~vSS~~-vyg 235 (263)
||||||....... .+++++++++|+.++..+++++. +.+ .+||++||.. .+|
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 143 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG 143 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC
Confidence 9999997543222 12356789999999988877654 322 3899999954 454
No 216
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.55 E-value=4.1e-14 Score=120.46 Aligned_cols=116 Identities=13% Similarity=0.117 Sum_probs=84.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc-----c---CCCcEEEEc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----L---LEVDQIYHL 187 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~-----~---~~iD~Vi~~ 187 (263)
+|+++||||+|+||++++++|+++ ++|++++|+.....+. .+. ...++++.+|+.|.. + .++|+|||+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~-~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDEL-AAE--LPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHH-HHH--hccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 579999999999999999999999 9999999875432221 111 235778899998752 2 259999999
Q ss_pred cCCCCCCCCC----CCHHHHHHHHHHHHHHHHH----HHHHcCCeEEEEcCcceec
Q 024766 188 ACPASPVHYK----YNPVKTIKTNVMGTLNMLG----LAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 188 Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~----~a~~~~~~iV~vSS~~vyg 235 (263)
||........ +++.+.+++|+.+..++.+ .+++.+.++|++||...++
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~ 134 (227)
T PRK08219 79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLR 134 (227)
T ss_pred CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcC
Confidence 9875432221 2356678999999555444 4455556999999987664
No 217
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.55 E-value=3.5e-14 Score=124.95 Aligned_cols=119 Identities=16% Similarity=0.067 Sum_probs=85.4
Q ss_pred CCCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcC-CCceEEEEcccccc------------cc
Q 024766 114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEP------------IL 178 (263)
Q Consensus 114 ~~~k~vlVTGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~------------~~ 178 (263)
+++|+++||||++ +||++++++|+++|++|++.+|+. ...+...+... ......+.+|++|+ .+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 5688999999985 999999999999999999888762 22222222221 23456788999876 23
Q ss_pred CCCcEEEEccCCCCCCC-----C----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 179 LEVDQIYHLACPASPVH-----Y----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
..+|++|||||...... . .+.++..+++|+.|...+.+++... +.+||++||.+.
T Consensus 83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~ 149 (262)
T PRK07984 83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA 149 (262)
T ss_pred CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCC
Confidence 56999999999643211 1 1235677899999999888876432 248999998753
No 218
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.55 E-value=7e-14 Score=120.37 Aligned_cols=120 Identities=18% Similarity=0.139 Sum_probs=87.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
.|+++||||+|+||.+++++|+++|++|++++|+............ ...++.++.+|+.+.. +..+
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999999999987542111111111 2346888999998762 2459
Q ss_pred cEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcceec
Q 024766 182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~vyg 235 (263)
|+||||||....... .+.++..+++|+.|+.++++.+ ++.+. +||++||...+.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~ 144 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK 144 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc
Confidence 999999997543222 2346778899999999986654 44443 999999976664
No 219
>PRK08324 short chain dehydrogenase; Validated
Probab=99.55 E-value=4.8e-14 Score=139.63 Aligned_cols=123 Identities=17% Similarity=0.092 Sum_probs=92.7
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~ 179 (263)
..+.+|+++||||+|+||.+++++|+++|++|++++|+.+..............+..+.+|++++. +.
T Consensus 418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 346789999999999999999999999999999999976544333222211246788899998762 24
Q ss_pred CCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCccee
Q 024766 180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~--~~iV~vSS~~vy 234 (263)
++|+||||||........ +.++..+++|+.|+.++++++. +.+ .+||++||...+
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~ 562 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV 562 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc
Confidence 699999999975543322 2467789999999999977763 333 489999997554
No 220
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.55 E-value=5.5e-14 Score=121.52 Aligned_cols=120 Identities=18% Similarity=0.153 Sum_probs=85.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++++||||+|+||.+++++|+++|++|++++++.....+.....+ ...++.++.+|+.+.. +..+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999998887654332222222211 2345778899998762 2468
Q ss_pred cEEEEccCCCCCCC-C----CCCHHHHHHHHHHHHHHHHHHHHHc------C--CeEEEEcCcc-eec
Q 024766 182 DQIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGLAKRV------G--AKFLLTSTSE-VYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~~a~~~------~--~~iV~vSS~~-vyg 235 (263)
|+||||||...... . .+++++++++|+.|+.++++.+.+. + .+||++||.+ .++
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 149 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLG 149 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCC
Confidence 99999999754321 1 1245688999999999988886542 1 2699999964 555
No 221
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.55 E-value=7e-14 Score=122.06 Aligned_cols=120 Identities=13% Similarity=0.085 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc--------cCCCcE
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI--------LLEVDQ 183 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~--------~~~iD~ 183 (263)
+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ...++.++.+|++++. ...+|+
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 567899999999999999999999999999999987654433222221 2346788899998752 356999
Q ss_pred EEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCcce
Q 024766 184 IYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEV 233 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~v 233 (263)
+|||||........ ++++..+++|+.+..++++.+ ++.+ .+||++||...
T Consensus 85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 143 (259)
T PRK06125 85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAG 143 (259)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccc
Confidence 99999975332222 246778999999999988876 3333 38999988643
No 222
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.54 E-value=5.9e-14 Score=123.56 Aligned_cols=117 Identities=17% Similarity=0.153 Sum_probs=85.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cCCCc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEVD 182 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~~iD 182 (263)
|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.. ....+..+.+|+.++. +..+|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 479999999999999999999999999999887554333322221 2233455788887652 24589
Q ss_pred EEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEcCcce
Q 024766 183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----V--GAKFLLTSTSEV 233 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~--~~~iV~vSS~~v 233 (263)
+||||||........ ++++..+++|+.|+.++++++.. . +.+||++||...
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~ 141 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAG 141 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccc
Confidence 999999975432222 24577899999999999998642 2 248999999754
No 223
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.54 E-value=8.1e-14 Score=121.85 Aligned_cols=122 Identities=17% Similarity=0.142 Sum_probs=89.5
Q ss_pred cCCCCEEEEEcCCC-hHHHHHHHHHHhCCCeEEEEecCCccchhhhhhh---cCCCceEEEEccccccc-----------
Q 024766 113 GRRRLRIVVTGGAG-FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH---FRNPRFELIRHDVVEPI----------- 177 (263)
Q Consensus 113 ~~~~k~vlVTGatG-~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~---~~~~~v~~~~~Dv~~~~----------- 177 (263)
.+++|+++||||+| +||.++++.|+++|++|++++|+.+...+...+. ....++..+.+|+.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 35678999999997 8999999999999999999988765443332222 22346888999998751
Q ss_pred -cCCCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCccee
Q 024766 178 -LLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVY 234 (263)
Q Consensus 178 -~~~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~--~~iV~vSS~~vy 234 (263)
+..+|+||||||........ +++.+.+++|+.|+.++++.+.+ .+ .+||++||...+
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~ 161 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW 161 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc
Confidence 24689999999975433322 24667789999999998887642 32 389999886443
No 224
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.54 E-value=4.2e-14 Score=116.92 Aligned_cols=130 Identities=17% Similarity=0.060 Sum_probs=99.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------------ccCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE 180 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------------~~~~ 180 (263)
.++.|..+||||+++||++++..|++.|++|.+.+++....++....+-....-..+.+|+.++ .+..
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ 90 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT 90 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence 4567789999999999999999999999999999987765554444442334556788898775 2345
Q ss_pred CcEEEEccCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHc-------CCeEEEEcCc-ceecCCCCCCc
Q 024766 181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV-------GAKFLLTSTS-EVYGDPLEHPQ 242 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~-------~~~iV~vSS~-~vyg~~~~~~~ 242 (263)
+++++||||+.-... ..++|++.+.+|+.|++.+.+++.+. +.+||++||+ +-.|+..+..|
T Consensus 91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnY 164 (256)
T KOG1200|consen 91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNY 164 (256)
T ss_pred CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhh
Confidence 999999999865422 34579999999999999999987543 2389999994 66665554433
No 225
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.54 E-value=6e-14 Score=123.20 Aligned_cols=117 Identities=15% Similarity=0.109 Sum_probs=82.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEccccccc----------------
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI---------------- 177 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~---------------- 177 (263)
++++||||+|+||.+++++|+++|++|++++|+..+..+.+.+.+ ...++..+.+|++|..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 479999999999999999999999999998765333322222222 1235667889998862
Q ss_pred cCCCcEEEEccCCCCCCCCC----C-----------CHHHHHHHHHHHHHHHHHHHHHcC-----------CeEEEEcCc
Q 024766 178 LLEVDQIYHLACPASPVHYK----Y-----------NPVKTIKTNVMGTLNMLGLAKRVG-----------AKFLLTSTS 231 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~~~~----~-----------~~~~~~~~Nv~gt~~ll~~a~~~~-----------~~iV~vSS~ 231 (263)
+..+|+||||||........ + ++.+.+++|+.++.++++++.... .+||++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 24699999999964432211 1 256779999999999988753221 267888776
Q ss_pred ce
Q 024766 232 EV 233 (263)
Q Consensus 232 ~v 233 (263)
..
T Consensus 162 ~~ 163 (267)
T TIGR02685 162 MT 163 (267)
T ss_pred hc
Confidence 43
No 226
>PRK07069 short chain dehydrogenase; Validated
Probab=99.54 E-value=7.3e-14 Score=120.81 Aligned_cols=118 Identities=16% Similarity=0.157 Sum_probs=83.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcC----CCceEEEEccccccc------------cCCC
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR----NPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++||||+|+||.++++.|+++|++|++++|+.....+...+.+. ...+..+.+|+.+.. +..+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 389999999999999999999999999999873332222222211 223455778987752 3468
Q ss_pred cEEEEccCCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHcCC-eEEEEcCcceec
Q 024766 182 DQIYHLACPASPVHYK----YNPVKTIKTNVM----GTLNMLGLAKRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~----gt~~ll~~a~~~~~-~iV~vSS~~vyg 235 (263)
|+||||||........ +++++.+++|+. ++.++++.+++.+. +||++||...+.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~ 143 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFK 143 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhcc
Confidence 9999999975543322 235677899998 55666666666554 899999987765
No 227
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.54 E-value=7.3e-14 Score=120.86 Aligned_cols=120 Identities=18% Similarity=0.148 Sum_probs=84.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+|+++||||+|+||..+++.|+++|++|+++.++.....+...... ...++..+.+|+.+.. +..+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 5799999999999999999999999999877654332222222211 2346888999997652 2469
Q ss_pred cEEEEccCCCCCCC-C----CCCHHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEcCcc-eec
Q 024766 182 DQIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGLAKRV--------GAKFLLTSTSE-VYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~~a~~~--------~~~iV~vSS~~-vyg 235 (263)
|+||||||...... . .++++..+++|+.|+.++++.+.+. +.+||++||.+ .++
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~ 149 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLG 149 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCC
Confidence 99999999753321 1 1235677999999999887654321 13699999964 455
No 228
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.53 E-value=1e-13 Score=124.74 Aligned_cols=120 Identities=12% Similarity=0.014 Sum_probs=85.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcc---------chhhhhhhc--CCCceEEEEcccccc-----
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG---------RKDNLVHHF--RNPRFELIRHDVVEP----- 176 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~---------~~~~~~~~~--~~~~v~~~~~Dv~~~----- 176 (263)
.+++|+++||||+++||.+++++|++.|++|++++|+... ..+.+.+.+ ...++..+.+|+.++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 3678999999999999999999999999999999987421 111111111 134567889999876
Q ss_pred -------ccCCCcEEEEcc-CCCC--C--CCC-C---CCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCcc
Q 024766 177 -------ILLEVDQIYHLA-CPAS--P--VHY-K---YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSE 232 (263)
Q Consensus 177 -------~~~~iD~Vi~~A-g~~~--~--~~~-~---~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~ 232 (263)
.+..+|++|||| |... . ... + +++.+.+++|+.++..+++++.. .+ .+||++||..
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~ 161 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT 161 (305)
T ss_pred HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence 235699999999 7421 0 111 1 23567789999999998877643 22 4899999854
No 229
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.53 E-value=5.4e-14 Score=121.08 Aligned_cols=121 Identities=16% Similarity=0.082 Sum_probs=88.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-ecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVI-DNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
+++|+++||||+|+||.+++++|+++|++|+++ +|+.+...+...... ...++.++.+|+.+.. +.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 567899999999999999999999999999998 776544332222221 2346888999998762 23
Q ss_pred CCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCccee
Q 024766 180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~~vy 234 (263)
++|+|||+||....... .+.+++.+++|+.|+.++++.+.. .+ .+||++||...+
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~ 146 (247)
T PRK05565 83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGL 146 (247)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhc
Confidence 69999999997532221 223577899999999998887653 33 379999996543
No 230
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.53 E-value=3.3e-14 Score=124.58 Aligned_cols=120 Identities=13% Similarity=0.035 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCcc--chhhhhhhc-CCCceEEEEcccccc------------
Q 024766 114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTG--RKDNLVHHF-RNPRFELIRHDVVEP------------ 176 (263)
Q Consensus 114 ~~~k~vlVTGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~--~~~~~~~~~-~~~~v~~~~~Dv~~~------------ 176 (263)
+++|+++||||+ ++||++++++|+++|++|++.+|+.+. ..+.+.+.. ....+..+.+|+.|+
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 568899999986 899999999999999999888765431 122222221 123466788999876
Q ss_pred ccCCCcEEEEccCCCCC----CCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 177 ILLEVDQIYHLACPASP----VHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 177 ~~~~iD~Vi~~Ag~~~~----~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
.+..+|++|||||.... ..+ .+++++.+++|+.|+.++++++... +.+||++||...
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~ 151 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG 151 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 23469999999997531 122 2346788999999999988876432 348999999653
No 231
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.53 E-value=7.1e-14 Score=121.75 Aligned_cols=122 Identities=11% Similarity=0.096 Sum_probs=90.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDE-VIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~ 179 (263)
+++|+++||||+|+||..++++|+++|++ |++++|+.+...+...... ...++.++.+|++++. +.
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 57789999999999999999999999998 9999887544332222221 2346778889998752 24
Q ss_pred CCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~--~~iV~vSS~~vyg 235 (263)
++|+||||||........ +.++..+++|+.|+.++++++.+ .+ .++|++||...++
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~ 149 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG 149 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc
Confidence 689999999975432221 23467799999999999888743 22 3799999987775
No 232
>PRK06484 short chain dehydrogenase; Validated
Probab=99.53 E-value=6.6e-14 Score=134.16 Aligned_cols=119 Identities=19% Similarity=0.248 Sum_probs=89.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
.++|+++||||+++||.+++++|+++|++|++++|+.+...+...+. ..++..+.+|++++. +..+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL--GPDHHALAMDVSDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 36789999999999999999999999999999998765544333322 345678899998762 2469
Q ss_pred cEEEEccCCCCC--CC----CCCCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEcCccee
Q 024766 182 DQIYHLACPASP--VH----YKYNPVKTIKTNVMGTLNMLGLAKRV------GAKFLLTSTSEVY 234 (263)
Q Consensus 182 D~Vi~~Ag~~~~--~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~------~~~iV~vSS~~vy 234 (263)
|+||||||.... .. ..+++++.+++|+.|+.++++++... +.+||++||....
T Consensus 81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~ 145 (520)
T PRK06484 81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL 145 (520)
T ss_pred CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC
Confidence 999999997322 11 12346788999999999998886432 2389999997554
No 233
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.53 E-value=3.3e-14 Score=122.88 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=84.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc---------c-------C
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI---------L-------L 179 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~---------~-------~ 179 (263)
+++++||||+|+||.+++++|+++|++|++++|+..... ... ...++..+.+|+.+.. . .
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL---AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh---hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 358999999999999999999999999999998754311 111 2346788899987752 0 1
Q ss_pred CCcEEEEccCCCCCCC-C----CCCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCcceec
Q 024766 180 EVDQIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~iV~vSS~~vyg 235 (263)
.+|++|||||...... . .+.+++.+++|+.|+..+++.+. +.+ .+||++||.+.+.
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 142 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN 142 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC
Confidence 4899999999754321 1 12356778999999877766654 333 3899999987654
No 234
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.52 E-value=5.9e-14 Score=123.19 Aligned_cols=119 Identities=15% Similarity=-0.013 Sum_probs=84.2
Q ss_pred CCCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcC-CCceEEEEcccccc------------cc
Q 024766 114 RRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEP------------IL 178 (263)
Q Consensus 114 ~~~k~vlVTGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~------------~~ 178 (263)
+++|+++|||| +++||.+++++|+++|++|++++|... ..+.+.+... ......+.+|++|+ .+
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW 82 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence 56789999996 689999999999999999998865421 1222222111 12234678899876 23
Q ss_pred CCCcEEEEccCCCCCC----C-----CCCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 179 LEVDQIYHLACPASPV----H-----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~----~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
..+|++|||||..... . ..++++..+++|+.|+..+++++... +.+||++||.+.
T Consensus 83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~ 149 (260)
T PRK06997 83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA 149 (260)
T ss_pred CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccc
Confidence 5699999999975321 1 11246778999999999998887543 248999998654
No 235
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.52 E-value=9.7e-14 Score=119.92 Aligned_cols=123 Identities=15% Similarity=0.098 Sum_probs=89.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++++++||||+|+||..+++.|+++|++|++++|+..+..+...+.. ...++..+.+|++++. ...
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 567899999999999999999999999999999987654433333221 2456788899987752 135
Q ss_pred CcEEEEccCCCCCCC-------------CCCCHHHHHHHHHHHHHHHHHHHH----Hc-C-CeEEEEcCcceecC
Q 024766 181 VDQIYHLACPASPVH-------------YKYNPVKTIKTNVMGTLNMLGLAK----RV-G-AKFLLTSTSEVYGD 236 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~-------------~~~~~~~~~~~Nv~gt~~ll~~a~----~~-~-~~iV~vSS~~vyg~ 236 (263)
+|+||||||...... ..+.+...+++|+.|+.++++.+. +. . ..||++||.+.|+.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~ 157 (253)
T PRK08217 83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN 157 (253)
T ss_pred CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC
Confidence 899999999643211 112356778999999988776542 22 2 37999999887764
No 236
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.52 E-value=9.8e-14 Score=122.78 Aligned_cols=124 Identities=16% Similarity=0.092 Sum_probs=94.6
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc----CCCceEEEEcccccc-----------
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF----RNPRFELIRHDVVEP----------- 176 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~----~~~~v~~~~~Dv~~~----------- 176 (263)
..+.+|+++||||+.+||++++++|++.|++|++.+|+.+...+...... ...++..+.+|+.++
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999998776555444432 245689999999765
Q ss_pred -c-cCCCcEEEEccCCCCCCC-----CCCCHHHHHHHHHHH-HHHHHHHHH----HcC-CeEEEEcCcceec
Q 024766 177 -I-LLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMG-TLNMLGLAK----RVG-AKFLLTSTSEVYG 235 (263)
Q Consensus 177 -~-~~~iD~Vi~~Ag~~~~~~-----~~~~~~~~~~~Nv~g-t~~ll~~a~----~~~-~~iV~vSS~~vyg 235 (263)
. +.++|++|||||...... ..+.++..+++|+.| ++.+..++. +.+ ..|+++||.+.+.
T Consensus 84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~ 155 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG 155 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc
Confidence 2 567999999999765442 223578889999996 666665553 222 3899999876554
No 237
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.52 E-value=1.3e-13 Score=120.34 Aligned_cols=122 Identities=12% Similarity=0.104 Sum_probs=85.6
Q ss_pred cCCCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCCccc----------hhhhhhhc--CCCceEEEEcccccc--
Q 024766 113 GRRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGR----------KDNLVHHF--RNPRFELIRHDVVEP-- 176 (263)
Q Consensus 113 ~~~~k~vlVTGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~----------~~~~~~~~--~~~~v~~~~~Dv~~~-- 176 (263)
.+++|+++||||+| +||.+++++|+++|++|+++++....+ .....+.+ ...++..+.+|+.+.
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 46789999999995 899999999999999999876431110 11111111 234678889999875
Q ss_pred ----------ccCCCcEEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCccee
Q 024766 177 ----------ILLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVY 234 (263)
Q Consensus 177 ----------~~~~iD~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~-~~iV~vSS~~vy 234 (263)
.+..+|+||||||........ +.+++.+++|+.|...+.+.+ ++.+ .+||++||....
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 159 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ 159 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC
Confidence 234589999999975433222 245677999999988886554 3332 399999997644
No 238
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.52 E-value=9.7e-14 Score=119.41 Aligned_cols=117 Identities=17% Similarity=0.197 Sum_probs=85.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEccccccc------------cCCCcEE
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEVDQI 184 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~------------~~~iD~V 184 (263)
++||||+|+||.+++++|+++|++|++++|+.....+...+.+ ...++.++.+|+.+.. ...+|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999999999998876443332222221 2356888999998762 2458999
Q ss_pred EEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHH-----HcC-CeEEEEcCc-ceec
Q 024766 185 YHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK-----RVG-AKFLLTSTS-EVYG 235 (263)
Q Consensus 185 i~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~-----~~~-~~iV~vSS~-~vyg 235 (263)
|||||......+ .++++.++++|+.|+.++++++. +.+ .+||++||. +.++
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 142 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG 142 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC
Confidence 999997543322 23567889999999999988652 223 389999995 4555
No 239
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.52 E-value=1.3e-13 Score=122.03 Aligned_cols=113 Identities=19% Similarity=0.175 Sum_probs=84.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc-----------cCCCcE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI-----------LLEVDQ 183 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~-----------~~~iD~ 183 (263)
+|+++|||+ |+||++++++|+ +|++|++++|+.+...+...+.. ...++.++.+|+.|+. +..+|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 568999997 799999999996 89999999987654433322221 1346788999998762 246999
Q ss_pred EEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
||||||... ...++++++++|+.|+.++++++.+. +.++|++||.+.
T Consensus 80 li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~ 129 (275)
T PRK06940 80 LVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSG 129 (275)
T ss_pred EEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEeccc
Confidence 999998642 23568899999999999999987543 236778877654
No 240
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.52 E-value=1.8e-13 Score=117.67 Aligned_cols=116 Identities=20% Similarity=0.194 Sum_probs=83.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhh-hhh-cCCCceEEEEccccccc------------cCCCc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL-VHH-FRNPRFELIRHDVVEPI------------LLEVD 182 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~-~~~-~~~~~v~~~~~Dv~~~~------------~~~iD 182 (263)
|+++||||+|+||++++++|+++|++|+++.|+.....+.. .+. ....++.++.+|+.++. +..+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 58999999999999999999999999999887322222211 111 12346888999998752 24599
Q ss_pred EEEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCcc
Q 024766 183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSE 232 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-~iV~vSS~~ 232 (263)
+||||||........ +++++.+++|+.++..+++.+ ++.+. +||++||..
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 139 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVN 139 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchh
Confidence 999999875432222 245677899999988866554 44444 899999964
No 241
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.52 E-value=1.2e-13 Score=120.82 Aligned_cols=117 Identities=13% Similarity=0.130 Sum_probs=84.8
Q ss_pred CCCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEecCCc-cchhhhhhhcCCCceEEEEccccccc------------c
Q 024766 114 RRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFT-GRKDNLVHHFRNPRFELIRHDVVEPI------------L 178 (263)
Q Consensus 114 ~~~k~vlVTGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~-~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~ 178 (263)
+++|+++|||| +++||.+++++|+++|++|++++|+.. +..+.+.+... ..+..+.+|++|+. +
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56789999999 899999999999999999999987531 22222222222 25678899998762 3
Q ss_pred CCCcEEEEccCCCCC----CCC-C---CCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCc
Q 024766 179 LEVDQIYHLACPASP----VHY-K---YNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTS 231 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~----~~~-~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~ 231 (263)
..+|++|||||+... ..+ + +++++.+++|+.|+.++++.+... +.+||++|+.
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~ 147 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFD 147 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeec
Confidence 569999999997532 111 1 235667999999999988886532 2489998764
No 242
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.51 E-value=1.5e-13 Score=118.42 Aligned_cols=119 Identities=8% Similarity=0.055 Sum_probs=86.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEcccccc------------ccC-
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILL- 179 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~------------~~~- 179 (263)
+++|+++||||+++||.+++++|+++|++|++++|+.+..++...+.. ...++..+.+|+.++ .+.
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 568899999999999999999999999999999987665544333321 234567788888765 235
Q ss_pred CCcEEEEccCCCCCC-CCCC----CHHHHHHHHHHHHHHHHHHH----HHcC--CeEEEEcCcc
Q 024766 180 EVDQIYHLACPASPV-HYKY----NPVKTIKTNVMGTLNMLGLA----KRVG--AKFLLTSTSE 232 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~-~~~~----~~~~~~~~Nv~gt~~ll~~a----~~~~--~~iV~vSS~~ 232 (263)
.+|++|||||..... .+.+ ++.+.+++|+.++..+++.+ ++.+ ..||++||..
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~ 146 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHD 146 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 799999999853322 2222 34566788999988876654 3333 4899999864
No 243
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.51 E-value=2.1e-13 Score=117.56 Aligned_cols=120 Identities=16% Similarity=0.078 Sum_probs=84.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCccchhhhhhhc-CCCceEEEEccccccc------------cCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVID-NFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~-r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++++||||+|+||.+++++|+++|++|+++. |+.+...+...+.. ...++..+.+|+.|+. ...+
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999999999998754 43332222222221 1345788999998762 2458
Q ss_pred cEEEEccCCCCCCC-C----CCCHHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEcCcce-ec
Q 024766 182 DQIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGLAKRV--------GAKFLLTSTSEV-YG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~~a~~~--------~~~iV~vSS~~v-yg 235 (263)
|+||||||...... . .++++..+++|+.++.++++.+... +.+||++||... ++
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~ 148 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG 148 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC
Confidence 99999999643222 1 1235678999999999888765432 236999999754 44
No 244
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.50 E-value=1e-13 Score=115.46 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=92.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
..|.+|+||||+++||.+|+++|.+.|-+|++..|+.....+... ..+.+....+|+.|.. ...+
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~---~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA---ENPEIHTEVCDVADRDSRRELVEWLKKEYPNL 79 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHh---cCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence 457799999999999999999999999999999997665554443 3467778888988763 2358
Q ss_pred cEEEEccCCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEcCcceec
Q 024766 182 DQIYHLACPASPVHYK------YNPVKTIKTNVMGTLNMLGLAKRV-----GAKFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~------~~~~~~~~~Nv~gt~~ll~~a~~~-----~~~iV~vSS~~vyg 235 (263)
++||||||+.....+. ++.++.+.+|+.++..+..++..+ ..-||+|||.=.+-
T Consensus 80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv 144 (245)
T COG3967 80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV 144 (245)
T ss_pred heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC
Confidence 9999999986554432 234677899999999988886443 23799999975554
No 245
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.50 E-value=1.5e-13 Score=127.90 Aligned_cols=105 Identities=15% Similarity=0.159 Sum_probs=80.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEc
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL 187 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~ 187 (263)
.+++|+++||||+|+||++++++|+++|++|++++|+.++..+.... ....+..+.+|+.|+ .+.++|++|||
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~--~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING--EDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--cCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 35789999999999999999999999999999999875443222211 123466788898876 35679999999
Q ss_pred cCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 024766 188 ACPASPVH-YKYNPVKTIKTNVMGTLNMLGLAK 219 (263)
Q Consensus 188 Ag~~~~~~-~~~~~~~~~~~Nv~gt~~ll~~a~ 219 (263)
||...... ..+++++.+++|+.|+.++++++.
T Consensus 253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~l 285 (406)
T PRK07424 253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFF 285 (406)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99753322 223467889999999999999864
No 246
>PLN00015 protochlorophyllide reductase
Probab=99.49 E-value=1.8e-13 Score=123.02 Aligned_cols=115 Identities=14% Similarity=0.128 Sum_probs=84.3
Q ss_pred EEEcCCChHHHHHHHHHHhCC-CeEEEEecCCccchhhhhhhc-CCCceEEEEccccccc------------cCCCcEEE
Q 024766 120 VVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEVDQIY 185 (263)
Q Consensus 120 lVTGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~iD~Vi 185 (263)
+||||+++||.+++++|+++| ++|++++|+.+...+...+.. ....+.++.+|+.+.. ...+|+||
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 599999999999999999999 999999887554333332221 2346778899997752 24589999
Q ss_pred EccCCCCCC-C----CCCCHHHHHHHHHHHHHHHHHHH----HHcC---CeEEEEcCccee
Q 024766 186 HLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLA----KRVG---AKFLLTSTSEVY 234 (263)
Q Consensus 186 ~~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~---~~iV~vSS~~vy 234 (263)
||||+.... . ..++++..+++|+.|+.++++.+ ++.+ .+||++||...+
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 999974321 1 12346788999999988887664 3333 499999997654
No 247
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.49 E-value=2.4e-13 Score=116.74 Aligned_cols=120 Identities=12% Similarity=0.047 Sum_probs=87.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
+++|+++||||+|+||.++++.|+++|++|++++|+.+...+.........++..+.+|+.++. +..+
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999999999999999999976543322222212236788899998752 3458
Q ss_pred cEEEEccCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 182 DQIYHLACPASPVHY--KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
|.+||++|....... .++++..+++|+.+..++++.+.+. +.++|++||...
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 139 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSG 139 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence 999999985432111 1335677899999999888887543 348999998644
No 248
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.49 E-value=1.2e-13 Score=119.68 Aligned_cols=118 Identities=14% Similarity=0.196 Sum_probs=82.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccccc------------C--CC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL------------L--EV 181 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~------------~--~i 181 (263)
+|+++||||+|+||++++++|+++|++|++++|...+..+.+... ...++.++.+|+++... . ..
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV 79 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence 468999999999999999999999999999998753322222222 23467888999987621 1 11
Q ss_pred --cEEEEccCCCCCC-CC----CCCHHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCccee
Q 024766 182 --DQIYHLACPASPV-HY----KYNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEVY 234 (263)
Q Consensus 182 --D~Vi~~Ag~~~~~-~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~--~~iV~vSS~~vy 234 (263)
+++|||||...+. .+ .+++.+.+++|+.|...+++.+. +.+ .+||++||...+
T Consensus 80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 145 (251)
T PRK06924 80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK 145 (251)
T ss_pred CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc
Confidence 2789999875432 12 22456778999999877776653 322 389999997654
No 249
>PRK08017 oxidoreductase; Provisional
Probab=99.49 E-value=2.2e-13 Score=118.30 Aligned_cols=112 Identities=17% Similarity=0.116 Sum_probs=81.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc-------------cCCCcE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-------------LLEVDQ 183 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~-------------~~~iD~ 183 (263)
|+++||||+|+||.++++.|+++|++|++++|+.++.+. .. ...+..+.+|+.+.. ...+|.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ 77 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-MN----SLGFTGILLDLDDPESVERAADEVIALTDNRLYG 77 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-HH----hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence 689999999999999999999999999999987543322 11 124667888887641 145899
Q ss_pred EEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHH----HHHHHcCC-eEEEEcCcce
Q 024766 184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNML----GLAKRVGA-KFLLTSTSEV 233 (263)
Q Consensus 184 Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll----~~a~~~~~-~iV~vSS~~v 233 (263)
+|||||....... .+++++.+++|+.|+.++. +.+++.+. +||++||...
T Consensus 78 ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 136 (256)
T PRK08017 78 LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMG 136 (256)
T ss_pred EEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccc
Confidence 9999986443222 2235678999999988864 44555554 8999999643
No 250
>PRK05599 hypothetical protein; Provisional
Probab=99.49 E-value=3.3e-13 Score=117.33 Aligned_cols=117 Identities=11% Similarity=0.130 Sum_probs=83.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc--CCCceEEEEcccccc------------ccCCCc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------ILLEVD 182 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~------------~~~~iD 182 (263)
|+++||||+++||.+++++|+ +|++|++++|+.++.++...+.. ....+..+.+|+.|+ ....+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999 59999999987655444333332 223477889999886 234699
Q ss_pred EEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHH----HHHcC--CeEEEEcCccee
Q 024766 183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGL----AKRVG--AKFLLTSTSEVY 234 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~----a~~~~--~~iV~vSS~~vy 234 (263)
++|||||....... .+...+.+.+|+.+..+++.. +.+.+ .+||++||...+
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~ 141 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGW 141 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccc
Confidence 99999997543221 122456678999998876554 33332 489999997543
No 251
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.48 E-value=2.6e-13 Score=116.43 Aligned_cols=111 Identities=14% Similarity=0.193 Sum_probs=82.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccccc---------CCCcEEEEcc
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL---------LEVDQIYHLA 188 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~---------~~iD~Vi~~A 188 (263)
+++||||+|+||++++++|+++|++|++++|+.++..+...+ ..+..+.+|+.++.. ..+|++||||
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE----LDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECC
Confidence 699999999999999999999999999999865433222211 135678899987621 2589999999
Q ss_pred CCCCC---C---C---CCCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcc
Q 024766 189 CPASP---V---H---YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSE 232 (263)
Q Consensus 189 g~~~~---~---~---~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~ 232 (263)
|.... . . ..+++++.+++|+.|+.++++++... +.+||++||.+
T Consensus 78 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 133 (223)
T PRK05884 78 APSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN 133 (223)
T ss_pred CccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC
Confidence 85211 1 1 12357788999999999999987542 34899999864
No 252
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.48 E-value=6.9e-13 Score=115.45 Aligned_cols=117 Identities=16% Similarity=0.126 Sum_probs=87.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCcE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQ 183 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD~ 183 (263)
+|+++||||+|+||.+++++|+++|++|++++|+.....+..... ...++..+.+|+.+.. +.++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL-GDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 578999999999999999999999999999998765443333222 3456888899997762 135899
Q ss_pred EEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcce
Q 024766 184 IYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEV 233 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~v 233 (263)
||||||........+ .+...+.+|+.|+.++++++. +.+. +||++||...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 139 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG 139 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh
Confidence 999999754333222 235567899999999988873 3333 8999999643
No 253
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.48 E-value=8.6e-14 Score=118.92 Aligned_cols=148 Identities=27% Similarity=0.317 Sum_probs=121.1
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhh-hhhhc------CCCceEEEEccccccc------
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN-LVHHF------RNPRFELIRHDVVEPI------ 177 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~-~~~~~------~~~~v~~~~~Dv~~~~------ 177 (263)
+.....|.+||||-||.-|+.|++.|+..|++|..+.|+....... +.++. ....+.+..+|++|..
T Consensus 23 ~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I 102 (376)
T KOG1372|consen 23 GAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI 102 (376)
T ss_pred cCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence 3345567899999999999999999999999999998876554332 22322 2346788889999873
Q ss_pred -cCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC----CeEEEEcCcceecCCCCCCcCCCCCCCCCC
Q 024766 178 -LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG----AKFLLTSTSEVYGDPLEHPQKETYWGNVNP 252 (263)
Q Consensus 178 -~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~----~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p 252 (263)
..+++-|+|.|+..+.....+-++-+-++...|+++++++.+.++ ++|-..||+..||.....|+.|+ +|
T Consensus 103 ~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~-----TP 177 (376)
T KOG1372|consen 103 STIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSET-----TP 177 (376)
T ss_pred hccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccC-----CC
Confidence 246899999998777655556677777899999999999998876 38889999999999999999999 69
Q ss_pred CCcCccccccC
Q 024766 253 IGELLAATAVV 263 (263)
Q Consensus 253 ~~~~~~Y~~sK 263 (263)
+.|++.|+++|
T Consensus 178 FyPRSPYa~aK 188 (376)
T KOG1372|consen 178 FYPRSPYAAAK 188 (376)
T ss_pred CCCCChhHHhh
Confidence 99999999987
No 254
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.47 E-value=6e-13 Score=114.03 Aligned_cols=113 Identities=19% Similarity=0.146 Sum_probs=85.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc-----c------CCCcE
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----L------LEVDQ 183 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~-----~------~~iD~ 183 (263)
.+|+++||||+|+||.+++++|+++|++|++++|..... ...+++.+|+.+.. + .++|+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~ 71 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------FPGELFACDLADIEQTAATLAQINEIHPVDA 71 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence 467999999999999999999999999999999875431 01246778887752 1 25899
Q ss_pred EEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcceecCC
Q 024766 184 IYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDP 237 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~vyg~~ 237 (263)
||||||......+. +++...+++|+.|+.++.+++. +.+. +||++||.+.|+.+
T Consensus 72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 134 (234)
T PRK07577 72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL 134 (234)
T ss_pred EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC
Confidence 99999975543322 2456789999999988877653 3443 89999998877643
No 255
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.47 E-value=3.6e-13 Score=142.58 Aligned_cols=146 Identities=22% Similarity=0.220 Sum_probs=103.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC----CeEEEEecCCccchh--hhhhhc---------CCCceEEEEccccccc--
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRG----DEVIVIDNFFTGRKD--NLVHHF---------RNPRFELIRHDVVEPI-- 177 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G----~~V~~l~r~~~~~~~--~~~~~~---------~~~~v~~~~~Dv~~~~-- 177 (263)
..++|+||||+||||.+++++|++++ .+|+++.|....... .+.... ...++.++.+|+.++.
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 35799999999999999999999987 689999886433211 111100 0236889999997653
Q ss_pred ---------cCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCC---------
Q 024766 178 ---------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPL--------- 238 (263)
Q Consensus 178 ---------~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~--------- 238 (263)
..++|+|||||+... +..........|+.|+.+++++|++.+. +++++||.++|+...
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~---~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVH---WVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEec---CccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhh
Confidence 246999999997543 3345555667899999999999988775 899999999997421
Q ss_pred ---CCCcCCCCCCCCCCCCcCccccccC
Q 024766 239 ---EHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 239 ---~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
...+.|..+....+....+.|+.||
T Consensus 1127 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK 1154 (1389)
T TIGR03443 1127 QAGGAGIPESDDLMGSSKGLGTGYGQSK 1154 (1389)
T ss_pred hccCCCCCcccccccccccCCCChHHHH
Confidence 1234455433333445567899887
No 256
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.47 E-value=4.8e-13 Score=114.23 Aligned_cols=115 Identities=20% Similarity=0.239 Sum_probs=85.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc--------c--CCCcEEE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------L--LEVDQIY 185 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~--------~--~~iD~Vi 185 (263)
||+++||||+|+||++++++|+++|++|++++|+.+...+ +. ...++++.+|+.+.. + ..+|+||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~-~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA-LQ----ALGAEALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH-HH----hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 4689999999999999999999999999999987543322 11 123567889987752 1 2489999
Q ss_pred EccCCCCCC--C----CCCCHHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCc-ceec
Q 024766 186 HLACPASPV--H----YKYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTS-EVYG 235 (263)
Q Consensus 186 ~~Ag~~~~~--~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~iV~vSS~-~vyg 235 (263)
||+|..... . ..++++..+++|+.++.++++++.+. +.++|++||. ++++
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~ 136 (222)
T PRK06953 76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIG 136 (222)
T ss_pred ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccc
Confidence 999975321 1 22346788999999999999988642 2379999885 4565
No 257
>PLN00016 RNA-binding protein; Provisional
Probab=99.47 E-value=3.3e-13 Score=124.72 Aligned_cols=117 Identities=20% Similarity=0.290 Sum_probs=88.7
Q ss_pred CCCCEEEEE----cCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhh------hhcCCCceEEEEcccccc--cc--C
Q 024766 114 RRRLRIVVT----GGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV------HHFRNPRFELIRHDVVEP--IL--L 179 (263)
Q Consensus 114 ~~~k~vlVT----GatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~------~~~~~~~v~~~~~Dv~~~--~~--~ 179 (263)
..+++|+|| |||||||++|+++|+++|++|++++|.......... ..+....++++.+|+.|. .+ .
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~~ 129 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAGA 129 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhccC
Confidence 345789999 999999999999999999999999997653211100 011123478888998762 22 3
Q ss_pred CCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCC
Q 024766 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETY 246 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~ 246 (263)
++|+|||+++. ++.++.+++++|++.|+ +||++||.++||.....+..|.+
T Consensus 130 ~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~ 181 (378)
T PLN00016 130 GFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGD 181 (378)
T ss_pred CccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCC
Confidence 69999999752 13467899999999987 99999999999977666777774
No 258
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.47 E-value=4.4e-13 Score=108.60 Aligned_cols=119 Identities=19% Similarity=0.223 Sum_probs=86.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhh---hhh-cCCCceEEEEccccccc------------cC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNL---VHH-FRNPRFELIRHDVVEPI------------LL 179 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~---~~~-~~~~~v~~~~~Dv~~~~------------~~ 179 (263)
++++||||+|+||.+++++|+++|. .|+++.|+........ ... ....++..+.+|+.++. +.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999997 6777777654332211 111 12456778889997651 24
Q ss_pred CCcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcc-eec
Q 024766 180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSE-VYG 235 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~-vyg 235 (263)
.+|.|||+||....... .++++..+++|+.++.++++++++.+. ++|++||.. .++
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~ 142 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLG 142 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcC
Confidence 47999999986543222 234678899999999999999977664 899998854 444
No 259
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.47 E-value=4.4e-13 Score=126.50 Aligned_cols=120 Identities=17% Similarity=0.136 Sum_probs=87.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
.+++++++||||+|+||.+++++|+++|++|+++++.... +.+.+.........+.+|+++.. ...
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRVGGTALALDITAPDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence 4578999999999999999999999999999999874322 12222111123456788887752 236
Q ss_pred CcEEEEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEcCccee
Q 024766 181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV-----GAKFLLTSTSEVY 234 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~~iV~vSS~~vy 234 (263)
+|+||||||....... .+.++..+++|+.|+.++++++... +.+||++||.+.+
T Consensus 285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~ 347 (450)
T PRK08261 285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGI 347 (450)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhc
Confidence 9999999997543322 2346778999999999999998653 2489999996543
No 260
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.46 E-value=6.1e-13 Score=113.94 Aligned_cols=118 Identities=19% Similarity=0.160 Sum_probs=86.4
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhh-hhhc-CCCceEEEEccccccc------------cCCCcEE
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL-VHHF-RNPRFELIRHDVVEPI------------LLEVDQI 184 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~-~~~~-~~~~v~~~~~Dv~~~~------------~~~iD~V 184 (263)
++|||++|+||++++++|+++|++|++++|+.....+.. .... ...++.++.+|+++.. +..+|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999999999988753222222 1111 2345788999998763 2358999
Q ss_pred EEccCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCc-ceecC
Q 024766 185 YHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTS-EVYGD 236 (263)
Q Consensus 185 i~~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~iV~vSS~-~vyg~ 236 (263)
||+||....... .+.+++.+++|+.++.++++.+.+ .+ .+||++||. ++||.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~ 142 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN 142 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC
Confidence 999997543221 234678899999999999998754 23 389999995 56663
No 261
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.46 E-value=8.5e-13 Score=109.19 Aligned_cols=101 Identities=34% Similarity=0.572 Sum_probs=85.6
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccCCCCC
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPASP 193 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag~~~~ 193 (263)
|+|+||||++|+.++++|+++|++|+++.|+.++..+ ..+++.+.+|+.|+ .+.++|+||+++|....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence 7899999999999999999999999999998665443 56899999999886 45689999999964322
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCC
Q 024766 194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLE 239 (263)
Q Consensus 194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~ 239 (263)
+...+.++++++++.+. ++|++||.++|+....
T Consensus 74 -------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~ 107 (183)
T PF13460_consen 74 -------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPG 107 (183)
T ss_dssp -------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTS
T ss_pred -------------cccccccccccccccccccceeeeccccCCCCCc
Confidence 27788899999999987 9999999999985544
No 262
>PRK12320 hypothetical protein; Provisional
Probab=99.46 E-value=4e-13 Score=131.94 Aligned_cols=111 Identities=28% Similarity=0.393 Sum_probs=85.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc----cCCCcEEEEccCCCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI----LLEVDQIYHLACPAS 192 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~----~~~iD~Vi~~Ag~~~ 192 (263)
|+|+||||+||||++|+++|+++|++|++++|..... ....++++.+|+.++. +.++|+|||+|+...
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~ 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------LDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDT 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------ccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence 4799999999999999999999999999999753321 1246788999998864 357999999997521
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCC
Q 024766 193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKET 245 (263)
Q Consensus 193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~ 245 (263)
. . ...+|+.|+.|++++|++.++++|++||. ||.+...+..|.
T Consensus 73 ~-----~---~~~vNv~Gt~nLleAA~~~GvRiV~~SS~--~G~~~~~~~aE~ 115 (699)
T PRK12320 73 S-----A---PGGVGITGLAHVANAAARAGARLLFVSQA--AGRPELYRQAET 115 (699)
T ss_pred c-----c---hhhHHHHHHHHHHHHHHHcCCeEEEEECC--CCCCccccHHHH
Confidence 1 1 12589999999999999999899999986 454332333443
No 263
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.45 E-value=3.5e-13 Score=117.60 Aligned_cols=117 Identities=12% Similarity=0.026 Sum_probs=84.1
Q ss_pred EEEEEcCCChHHHHHHHHHHh----CCCeEEEEecCCccchhhhhhhc---CCCceEEEEcccccccc------------
Q 024766 118 RIVVTGGAGFVGSHLVDKLID----RGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPIL------------ 178 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~----~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~~------------ 178 (263)
.++||||+++||.+++++|++ .|++|++++|+.+...+...++. ....+.++.+|+.+...
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 79999999997655444333322 23467889999987521
Q ss_pred C----CCcEEEEccCCCCCC--CC-----CCCHHHHHHHHHHHHHHHHHHHHH----c-C--CeEEEEcCccee
Q 024766 179 L----EVDQIYHLACPASPV--HY-----KYNPVKTIKTNVMGTLNMLGLAKR----V-G--AKFLLTSTSEVY 234 (263)
Q Consensus 179 ~----~iD~Vi~~Ag~~~~~--~~-----~~~~~~~~~~Nv~gt~~ll~~a~~----~-~--~~iV~vSS~~vy 234 (263)
. +.|+||||||..... .. .+++++.+++|+.|+..+.+.+.+ . + .+||++||.+.+
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~ 155 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI 155 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhC
Confidence 1 136999999964321 11 134578899999999888776532 2 2 389999997654
No 264
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.45 E-value=7.3e-13 Score=114.77 Aligned_cols=122 Identities=17% Similarity=0.163 Sum_probs=89.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcc-chhhhhhhc--CC-CceEEEEccccc-c-----------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG-RKDNLVHHF--RN-PRFELIRHDVVE-P----------- 176 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~-~~~~~~~~~--~~-~~v~~~~~Dv~~-~----------- 176 (263)
.+.+|+++||||+++||++++++|+++|+.|+++.++... ..+...... .. ..+....+|+++ .
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 3578899999999999999999999999998888877554 122221111 11 357777899987 4
Q ss_pred -ccCCCcEEEEccCCCCCC-CC----CCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCccee
Q 024766 177 -ILLEVDQIYHLACPASPV-HY----KYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVY 234 (263)
Q Consensus 177 -~~~~iD~Vi~~Ag~~~~~-~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS~~vy 234 (263)
.+..+|++|||||..... .. .+.+++.+++|+.|...+.+++..... +||++||....
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~ 147 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL 147 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc
Confidence 234599999999975431 21 235788899999999998886544444 99999998654
No 265
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.44 E-value=8.7e-13 Score=110.78 Aligned_cols=100 Identities=24% Similarity=0.357 Sum_probs=76.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc--------cCCCcEEEEcc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQIYHLA 188 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~--------~~~iD~Vi~~A 188 (263)
|+++||||+|+||++++++|+++ ++|++++|+.. .+.+|+.++. +.++|+|||||
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~a 63 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSAA 63 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999999999 99999987532 2456766542 24799999999
Q ss_pred CCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcce
Q 024766 189 CPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEV 233 (263)
Q Consensus 189 g~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~v 233 (263)
|....... .+++.+.+++|+.|+.++++++.+. +.+|+++||...
T Consensus 64 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~ 115 (199)
T PRK07578 64 GKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILS 115 (199)
T ss_pred CCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEccccc
Confidence 97543322 2246677899999999999987643 248999998653
No 266
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.43 E-value=3.8e-13 Score=112.75 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=88.0
Q ss_pred CCCEEEEEcC-CChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-------------ccCC
Q 024766 115 RRLRIVVTGG-AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-------------ILLE 180 (263)
Q Consensus 115 ~~k~vlVTGa-tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-------------~~~~ 180 (263)
..|.|+|||+ .|+||.+|+++|.+.|+.|++..|+.+...+...+ ..+.....|+.++ ..+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~----~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk 81 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ----FGLKPYKLDVSKPEEVVTVSGEVRANPDGK 81 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh----hCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence 4468888876 79999999999999999999999876654433322 2477788888776 2345
Q ss_pred CcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCcceec
Q 024766 181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYG 235 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~----~~~~iV~vSS~~vyg 235 (263)
+|++|||||..-.....+ ..++.|++|+.|..++.++... ....||++.|..+|-
T Consensus 82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v 144 (289)
T KOG1209|consen 82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV 144 (289)
T ss_pred eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe
Confidence 999999999654333222 3578899999999999888653 234899999987774
No 267
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.43 E-value=1.1e-12 Score=118.06 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=81.7
Q ss_pred cCCCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-----------CC---CceEEEEcccc--
Q 024766 113 GRRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-----------RN---PRFELIRHDVV-- 174 (263)
Q Consensus 113 ~~~~k~vlVTGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-----------~~---~~v~~~~~Dv~-- 174 (263)
.++||+++|||| +++||.++++.|++.|++|++ .|.....++...... .. .....+.+|+.
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD 84 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence 478999999999 799999999999999999988 554333322211110 00 11245566661
Q ss_pred ------c--------------c----------ccCCCcEEEEccCCCCC--CCC----CCCHHHHHHHHHHHHHHHHHHH
Q 024766 175 ------E--------------P----------ILLEVDQIYHLACPASP--VHY----KYNPVKTIKTNVMGTLNMLGLA 218 (263)
Q Consensus 175 ------~--------------~----------~~~~iD~Vi~~Ag~~~~--~~~----~~~~~~~~~~Nv~gt~~ll~~a 218 (263)
+ . .+..+|++|||||.... ..+ .+++++.+++|+.|+.++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~ 164 (303)
T PLN02730 85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF 164 (303)
T ss_pred ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 1 0 23469999999975321 121 2357888999999999998886
Q ss_pred HHc---CCeEEEEcCcce
Q 024766 219 KRV---GAKFLLTSTSEV 233 (263)
Q Consensus 219 ~~~---~~~iV~vSS~~v 233 (263)
... +.+||++||...
T Consensus 165 ~p~m~~~G~II~isS~a~ 182 (303)
T PLN02730 165 GPIMNPGGASISLTYIAS 182 (303)
T ss_pred HHHHhcCCEEEEEechhh
Confidence 543 249999999654
No 268
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.42 E-value=8.1e-13 Score=113.07 Aligned_cols=112 Identities=20% Similarity=0.240 Sum_probs=82.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc--------c--CCCcEEE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------L--LEVDQIY 185 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~--------~--~~iD~Vi 185 (263)
+|+++||||+|+||++++++|+++|++|++++|+.+...+ +.. ..++....+|+.|.. + .++|+||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA-LQA---LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH-HHh---ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence 4689999999999999999999999999999998655332 222 235667778887752 1 2599999
Q ss_pred EccCCCCCCC--C----CCCHHHHHHHHHHHHHHHHHHHHHc---C-CeEEEEcCc
Q 024766 186 HLACPASPVH--Y----KYNPVKTIKTNVMGTLNMLGLAKRV---G-AKFLLTSTS 231 (263)
Q Consensus 186 ~~Ag~~~~~~--~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~-~~iV~vSS~ 231 (263)
||||...... . .+++...+.+|+.++.++++.+... + ..++++||.
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~ 132 (225)
T PRK08177 77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ 132 (225)
T ss_pred EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC
Confidence 9999753321 1 1235677899999999998887543 2 478888875
No 269
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.39 E-value=2.2e-12 Score=120.51 Aligned_cols=133 Identities=25% Similarity=0.282 Sum_probs=100.2
Q ss_pred ccccCCCCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEecCCccch--hhhhhh-----c---------CCCceEEEE
Q 024766 110 VGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRK--DNLVHH-----F---------RNPRFELIR 170 (263)
Q Consensus 110 ~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~--~~~~~~-----~---------~~~~v~~~~ 170 (263)
....+++|+|+|||||||+|+.++++|++... +++++.|...+.. +.+... + ...++..+.
T Consensus 6 i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~ 85 (467)
T KOG1221|consen 6 IVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA 85 (467)
T ss_pred HHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecc
Confidence 34568999999999999999999999999754 6677777544331 111111 0 124677888
Q ss_pred ccccccc-----------cCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCcceecCC
Q 024766 171 HDVVEPI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDP 237 (263)
Q Consensus 171 ~Dv~~~~-----------~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS~~vyg~~ 237 (263)
+|+.++. ..++|+|||+| +.+++.+..+....+|+.||.+++++|++... -+|++||+.+..
T Consensus 86 GDi~~~~LGis~~D~~~l~~eV~ivih~A---AtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~-- 160 (467)
T KOG1221|consen 86 GDISEPDLGISESDLRTLADEVNIVIHSA---ATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNC-- 160 (467)
T ss_pred ccccCcccCCChHHHHHHHhcCCEEEEee---eeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheec--
Confidence 8987763 34699999999 56788888899999999999999999999875 799999997773
Q ss_pred CCCCcCCCCC
Q 024766 238 LEHPQKETYW 247 (263)
Q Consensus 238 ~~~~~~E~~~ 247 (263)
...-..|..+
T Consensus 161 ~~~~i~E~~y 170 (467)
T KOG1221|consen 161 NVGHIEEKPY 170 (467)
T ss_pred cccccccccc
Confidence 3334555543
No 270
>PRK05865 hypothetical protein; Provisional
Probab=99.37 E-value=3.7e-12 Score=127.56 Aligned_cols=99 Identities=26% Similarity=0.419 Sum_probs=81.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccCCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA 191 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag~~ 191 (263)
|+|+||||+||||++++++|+++|++|++++|+.... ....+.++.+|+.|. .+.++|+|||||+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--------~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--------WPSSADFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--------cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 4799999999999999999999999999999864321 012567888998875 346799999999753
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcc
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSE 232 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~ 232 (263)
.. .+++|+.|+.++++++++.+. +||++||.+
T Consensus 73 ~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~ 105 (854)
T PRK05865 73 GR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH 105 (854)
T ss_pred cc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH
Confidence 21 468999999999999999886 999999963
No 271
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.37 E-value=7.5e-12 Score=107.47 Aligned_cols=108 Identities=19% Similarity=0.270 Sum_probs=77.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCCccchhhhhhhcCCCceEEEEccccccc--------cCCCcEEEE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQIYH 186 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~--------~~~iD~Vi~ 186 (263)
|+++||||+|+||++++++|+++| ..|+..+|.... + ....++.++.+|+++.. +.++|+|||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~-----~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~ 73 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D-----FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLIN 73 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c-----cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 489999999999999999999986 455555553221 1 12456788899998752 357999999
Q ss_pred ccCCCCCCC------CC----CCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCc
Q 024766 187 LACPASPVH------YK----YNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTS 231 (263)
Q Consensus 187 ~Ag~~~~~~------~~----~~~~~~~~~Nv~gt~~ll~~a~~~----~-~~iV~vSS~ 231 (263)
|||...... .+ +.+...+.+|+.++..+++.+... + .+++++||.
T Consensus 74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~ 133 (235)
T PRK09009 74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAK 133 (235)
T ss_pred CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeec
Confidence 999754211 11 124577899999999888876442 2 388999873
No 272
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.35 E-value=4e-13 Score=109.36 Aligned_cols=122 Identities=16% Similarity=0.113 Sum_probs=93.6
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccccc--------CCCcE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL--------LEVDQ 183 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~--------~~iD~ 183 (263)
..+.|+.|++||+.-+||++++..|++.|++|+++.|.+......+.+ ....++.+.+|+.+.+. .-+|.
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e--~p~~I~Pi~~Dls~wea~~~~l~~v~pidg 80 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE--TPSLIIPIVGDLSAWEALFKLLVPVFPIDG 80 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh--CCcceeeeEecccHHHHHHHhhcccCchhh
Confidence 356889999999999999999999999999999999876554443332 23458889999977522 13899
Q ss_pred EEEccCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHH----cCC--eEEEEcCcceec
Q 024766 184 IYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VGA--KFLLTSTSEVYG 235 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~~--~iV~vSS~~vyg 235 (263)
++||||+.....+. +..++.|++|+.+..++.+...+ .++ .||++||.+..-
T Consensus 81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R 142 (245)
T KOG1207|consen 81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR 142 (245)
T ss_pred hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc
Confidence 99999987665544 35678899999999998887433 232 799999975543
No 273
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.34 E-value=4.9e-12 Score=110.00 Aligned_cols=122 Identities=18% Similarity=0.251 Sum_probs=89.4
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccC-CCcEEEEccCCCCCCC-C
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL-EVDQIYHLACPASPVH-Y 196 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~-~iD~Vi~~Ag~~~~~~-~ 196 (263)
|+||||||+||++|+.+|.+.|++|+++.|+..+....... .+. ..|-.+.... ++|+|||.||..-..+ +
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-----~v~--~~~~~~~~~~~~~DavINLAG~~I~~rrW 73 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-----NVT--LWEGLADALTLGIDAVINLAGEPIAERRW 73 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-----ccc--ccchhhhcccCCCCEEEECCCCccccccC
Confidence 68999999999999999999999999999987665443321 122 2222222222 7999999999654433 2
Q ss_pred CC-CHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEcCcceecCCCCCCcCCCCC
Q 024766 197 KY-NPVKTIKTNVMGTLNMLGLAKRVG--A-KFLLTSTSEVYGDPLEHPQKETYW 247 (263)
Q Consensus 197 ~~-~~~~~~~~Nv~gt~~ll~~a~~~~--~-~iV~vSS~~vyg~~~~~~~~E~~~ 247 (263)
.. ..+..++.-+..|..+.++..+.. . .+|.-|.++.||+..+..++|+++
T Consensus 74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~ 128 (297)
T COG1090 74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESP 128 (297)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCC
Confidence 22 245667889999999999987554 3 466666688999999999999953
No 274
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.31 E-value=1.2e-12 Score=106.52 Aligned_cols=120 Identities=22% Similarity=0.266 Sum_probs=91.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------------ccCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV 181 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------------~~~~i 181 (263)
.++...+||||.+++|++.+++|+++|+.|++++...++-.+...++ ..++.+...|++.+ .+..+
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel--g~~~vf~padvtsekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL--GGKVVFTPADVTSEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh--CCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence 35668999999999999999999999999999998665544444443 56788899999765 45679
Q ss_pred cEEEEccCCCCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHH---------cCC--eEEEEcCcceec
Q 024766 182 DQIYHLACPASPVH----------YKYNPVKTIKTNVMGTLNMLGLAKR---------VGA--KFLLTSTSEVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~----------~~~~~~~~~~~Nv~gt~~ll~~a~~---------~~~--~iV~vSS~~vyg 235 (263)
|..+||||+..... ..++..+.+++|+.||+|+++.... .|. -||++.|.+.|.
T Consensus 85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd 159 (260)
T KOG1199|consen 85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD 159 (260)
T ss_pred eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence 99999999754321 1235677789999999999987421 122 477788877775
No 275
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.30 E-value=3.4e-11 Score=106.50 Aligned_cols=120 Identities=18% Similarity=0.160 Sum_probs=90.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccccc--------------
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL-------------- 178 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~-------------- 178 (263)
...+|.|+|||+.++.|..|+++|.++|..|.+-+..+++. +.+....+.++...+..|++++..
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ga-e~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGA-ESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchH-HHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 34567899999999999999999999999999988544443 333333347788889999998732
Q ss_pred CCCcEEEEccCCCCCCC-C----CCCHHHHHHHHHHHHHHHHHH----HHHcCCeEEEEcCcce
Q 024766 179 LEVDQIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGL----AKRVGAKFLLTSTSEV 233 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~~----a~~~~~~iV~vSS~~v 233 (263)
.+.=.||||||+..... . .+++...+++|+.|+..+..+ .++...|||++||..-
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 23789999999654322 2 235788899999997776665 4666679999999754
No 276
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.28 E-value=2.2e-11 Score=107.57 Aligned_cols=119 Identities=20% Similarity=0.237 Sum_probs=90.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc---CCCceEEEEcccccc------------ccCCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEP------------ILLEV 181 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~------------~~~~i 181 (263)
.+++||||+.+||..++.++..+|++|.++.|+.++..+...++- ....+.+..+|+.|- ....+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 489999999999999999999999999999998777666554442 223467888888442 12348
Q ss_pred cEEEEccCCCCCCCCCCC----HHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEcCc-ceec
Q 024766 182 DQIYHLACPASPVHYKYN----PVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTS-EVYG 235 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~~~----~~~~~~~Nv~gt~~ll~~a~~~----~--~~iV~vSS~-~vyg 235 (263)
|.+|||||..-+..+++. .+..+++|..|+.|+++++... . .+|+++||. +.+|
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~ 178 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLG 178 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcC
Confidence 999999998776666554 4677899999999999886432 2 189999885 4443
No 277
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.27 E-value=1.7e-11 Score=110.03 Aligned_cols=122 Identities=11% Similarity=0.045 Sum_probs=77.8
Q ss_pred ccCCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCC------ccc-hhhhh--------------hh----cCCC
Q 024766 112 IGRRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFF------TGR-KDNLV--------------HH----FRNP 164 (263)
Q Consensus 112 ~~~~~k~vlVTGat--G~IG~~l~~~Ll~~G~~V~~l~r~~------~~~-~~~~~--------------~~----~~~~ 164 (263)
..+++|+++||||+ .+||+++++.|+++|++|++.++.+ +.. .+... +. ....
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~ 83 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD 83 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence 45689999999995 9999999999999999999976431 000 00000 00 0001
Q ss_pred ceEEEEccccc--------------------cccCCCcEEEEccCCCC--CCCC----CCCHHHHHHHHHHHHHHHHHHH
Q 024766 165 RFELIRHDVVE--------------------PILLEVDQIYHLACPAS--PVHY----KYNPVKTIKTNVMGTLNMLGLA 218 (263)
Q Consensus 165 ~v~~~~~Dv~~--------------------~~~~~iD~Vi~~Ag~~~--~~~~----~~~~~~~~~~Nv~gt~~ll~~a 218 (263)
..+-+.+|+.+ ..+..+|++|||||... ...+ .+++++.+++|+.|+.++++++
T Consensus 84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~ 163 (299)
T PRK06300 84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF 163 (299)
T ss_pred CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 11222222211 12356999999998632 1222 2346788999999999999987
Q ss_pred HHc---CCeEEEEcCcce
Q 024766 219 KRV---GAKFLLTSTSEV 233 (263)
Q Consensus 219 ~~~---~~~iV~vSS~~v 233 (263)
... +.+||++||...
T Consensus 164 ~p~m~~~G~ii~iss~~~ 181 (299)
T PRK06300 164 GPIMNPGGSTISLTYLAS 181 (299)
T ss_pred HHHhhcCCeEEEEeehhh
Confidence 543 248999988544
No 278
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.25 E-value=3.5e-11 Score=131.75 Aligned_cols=123 Identities=21% Similarity=0.162 Sum_probs=91.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecCCccc----------------------------------------
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGR---------------------------------------- 153 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~---------------------------------------- 153 (263)
++++++||||+++||.+++++|+++ |++|++++|+....
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 6789999999999999999999998 68999999872100
Q ss_pred ----h---hhhhhhc-CCCceEEEEccccccc-----------cCCCcEEEEccCCCCCCCC----CCCHHHHHHHHHHH
Q 024766 154 ----K---DNLVHHF-RNPRFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMG 210 (263)
Q Consensus 154 ----~---~~~~~~~-~~~~v~~~~~Dv~~~~-----------~~~iD~Vi~~Ag~~~~~~~----~~~~~~~~~~Nv~g 210 (263)
. +.+..+. .+..+.++.+|++|.. ...+|.||||||+...... .+++++.+++|+.|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0 0001110 2346788999998862 1259999999997654332 23577889999999
Q ss_pred HHHHHHHHHHcC-CeEEEEcCcc-eecCC
Q 024766 211 TLNMLGLAKRVG-AKFLLTSTSE-VYGDP 237 (263)
Q Consensus 211 t~~ll~~a~~~~-~~iV~vSS~~-vyg~~ 237 (263)
+.++++++.... .+||++||.. .||.+
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~ 2184 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFYGNT 2184 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcCCCC
Confidence 999999987765 3899999964 56643
No 279
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.23 E-value=5.7e-11 Score=98.96 Aligned_cols=122 Identities=21% Similarity=0.281 Sum_probs=81.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccc---hhhhhhhc-CCCceEEEEccccccc------------cCC
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGR---KDNLVHHF-RNPRFELIRHDVVEPI------------LLE 180 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~---~~~~~~~~-~~~~v~~~~~Dv~~~~------------~~~ 180 (263)
+++||||+|+||..+++.|+++|. +|+++.|+.... .+.+.+.. ...++.++.+|++|+. ...
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999987 889999883222 12222222 3668999999998862 235
Q ss_pred CcEEEEccCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCc-ceecCCCC
Q 024766 181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTS-EVYGDPLE 239 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~-~vyg~~~~ 239 (263)
+|.|||+||........+ ..+..+...+.|+.++.++...... .+|+.||+ +++|.+..
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq 146 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQ 146 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTB
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcch
Confidence 899999999765433322 3567789999999999999987666 78888885 56776543
No 280
>PRK06720 hypothetical protein; Provisional
Probab=99.22 E-value=1.7e-10 Score=95.22 Aligned_cols=121 Identities=13% Similarity=0.048 Sum_probs=80.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEcccccc------------ccC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILL 179 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~------------~~~ 179 (263)
.+++|+++||||+|+||.++++.|++.|++|++++|+.+...+...+.. ....+.++.+|+.+. .+.
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G 92 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS 92 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999987554332222221 234567788998764 235
Q ss_pred CCcEEEEccCCCCCCC-CCC-CHHHHHHHHHHHHHHHHHHH----HHcC--------CeEEEEcCcce
Q 024766 180 EVDQIYHLACPASPVH-YKY-NPVKTIKTNVMGTLNMLGLA----KRVG--------AKFLLTSTSEV 233 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~-~~~-~~~~~~~~Nv~gt~~ll~~a----~~~~--------~~iV~vSS~~v 233 (263)
++|++|||||...... +.+ ..+..-.+|+.++......+ .+.+ .||..|||.++
T Consensus 93 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (169)
T PRK06720 93 RIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ 160 (169)
T ss_pred CCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence 6999999999755333 222 22222355566555444443 2222 27888888654
No 281
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.20 E-value=1.9e-11 Score=107.96 Aligned_cols=118 Identities=17% Similarity=0.138 Sum_probs=88.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcC--CCceEEEEccccccc---------c--CCCc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR--NPRFELIRHDVVEPI---------L--LEVD 182 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~---------~--~~iD 182 (263)
|+-++|||||.+||++.+++|+++|.+|+++.|+.++......++.+ ..++..+..|.++.. + .++-
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG 128 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence 46899999999999999999999999999999998887766555543 356777888887653 1 2478
Q ss_pred EEEEccCCCC--CCCCCCCH----HHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCcce
Q 024766 183 QIYHLACPAS--PVHYKYNP----VKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEV 233 (263)
Q Consensus 183 ~Vi~~Ag~~~--~~~~~~~~----~~~~~~Nv~gt~~ll~~a~----~~~~-~iV~vSS~~v 233 (263)
++|||+|... +..+.+.+ ...+.+|+.++..+.+... +.+. -||++||.+-
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag 190 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAG 190 (312)
T ss_pred EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccc
Confidence 9999999765 33333322 4557899999887777643 3333 8999999643
No 282
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.16 E-value=2.3e-11 Score=105.23 Aligned_cols=113 Identities=19% Similarity=0.192 Sum_probs=84.8
Q ss_pred cCC--ChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------------cc-CCCcEEEEc
Q 024766 123 GGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------IL-LEVDQIYHL 187 (263)
Q Consensus 123 Gat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------------~~-~~iD~Vi~~ 187 (263)
|++ ++||.+++++|+++|++|++++|+.++..+.+.+.......+++.+|+.++ .+ ..+|++|||
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 566 999999999999999999999998776544444443322344699999776 35 779999999
Q ss_pred cCCCCC----CCCC----CCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCcceec
Q 024766 188 ACPASP----VHYK----YNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYG 235 (263)
Q Consensus 188 Ag~~~~----~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~vyg 235 (263)
+|.... ..+. +++...+++|+.++..+++.+.+. +.+||++||.+...
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~ 139 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR 139 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc
Confidence 987654 2222 246788999999999999987543 34899999875543
No 283
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.11 E-value=4e-10 Score=99.81 Aligned_cols=96 Identities=20% Similarity=0.333 Sum_probs=71.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----cc------CC-CcEEE
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL------LE-VDQIY 185 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~------~~-iD~Vi 185 (263)
+|+||||||+||++++++|+++|++|+++.|+.++.. ...++.+.+|..|+ .+ .+ +|.|+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------CCCCccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence 4899999999999999999999999999999865432 12344556677664 23 45 99999
Q ss_pred EccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCccee
Q 024766 186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 186 ~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vy 234 (263)
|+++... +. ...+.+++++|++.|+ +||++||..++
T Consensus 73 ~~~~~~~------~~-------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 73 LVAPPIP------DL-------APPMIKFIDFARSKGVRRFVLLSASIIE 109 (285)
T ss_pred EeCCCCC------Ch-------hHHHHHHHHHHHHcCCCEEEEeeccccC
Confidence 9985321 11 1234688999999997 99999997654
No 284
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.11 E-value=6.4e-10 Score=94.23 Aligned_cols=117 Identities=21% Similarity=0.210 Sum_probs=81.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-Cccchhhhhhh-cCCCceEEEEccccccc--------------c
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNF-FTGRKDNLVHH-FRNPRFELIRHDVVEPI--------------L 178 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l~r~-~~~~~~~~~~~-~~~~~v~~~~~Dv~~~~--------------~ 178 (263)
.|.++||||+.+||.-|+++|++. |.++++..++ +++..+++... ....++.++..|++... .
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 467999999999999999999986 6666555444 55433333222 25789999999997641 2
Q ss_pred CCCcEEEEccCCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHH----HHc-----C-------CeEEEEcCcc
Q 024766 179 LEVDQIYHLACPASPVHYKY-----NPVKTIKTNVMGTLNMLGLA----KRV-----G-------AKFLLTSTSE 232 (263)
Q Consensus 179 ~~iD~Vi~~Ag~~~~~~~~~-----~~~~~~~~Nv~gt~~ll~~a----~~~-----~-------~~iV~vSS~~ 232 (263)
.++|+++||||+........ .+-+.+++|..|+..+.+.+ ++. | ..||++||.+
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~ 157 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSA 157 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccc
Confidence 45899999999765443222 24566799999977766553 221 1 2699998864
No 285
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=2.4e-10 Score=96.77 Aligned_cols=129 Identities=23% Similarity=0.243 Sum_probs=95.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcCCCceEEEEcccccc-------ccCCCcEEEE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-------ILLEVDQIYH 186 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-------~~~~iD~Vi~ 186 (263)
+|+|+|||++|.+|++|.+.+.++|. +=.++.- . -++|+++. ..+++..|||
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~--------------s-----kd~DLt~~a~t~~lF~~ekPthVIh 61 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG--------------S-----KDADLTNLADTRALFESEKPTHVIH 61 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec--------------c-----ccccccchHHHHHHHhccCCceeee
Confidence 47899999999999999999999986 2222211 1 12333332 2356899999
Q ss_pred ccCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 187 LACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 187 ~Ag~~~~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
.|+..+.... ...+.+.|+.|+..-.|++..|-++|+ ++|+..|++.|.+....|++|+......|......|+.+|
T Consensus 62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAK 140 (315)
T KOG1431|consen 62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAK 140 (315)
T ss_pred hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHH
Confidence 9986543222 223567789999999999999999998 8999999999999999999999976555555555665544
No 286
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.94 E-value=1.2e-09 Score=94.60 Aligned_cols=92 Identities=16% Similarity=0.122 Sum_probs=70.1
Q ss_pred HHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc---------cCCCcEEEEccCCCCCCCCCCCHHH
Q 024766 132 LVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI---------LLEVDQIYHLACPASPVHYKYNPVK 202 (263)
Q Consensus 132 l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~---------~~~iD~Vi~~Ag~~~~~~~~~~~~~ 202 (263)
++++|+++|++|++++|+.+... ...++.+|+++.. ..++|+||||||... ..+++.
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~~~ 66 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPVEL 66 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCHHH
Confidence 47899999999999998754321 1235677887651 135999999998642 246788
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCeEEEEcCcceecCC
Q 024766 203 TIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDP 237 (263)
Q Consensus 203 ~~~~Nv~gt~~ll~~a~~~---~~~iV~vSS~~vyg~~ 237 (263)
.+++|+.|+.++++++.+. +.+||++||.+.|+.+
T Consensus 67 ~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~ 104 (241)
T PRK12428 67 VARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWP 104 (241)
T ss_pred hhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccc
Confidence 9999999999999998653 2499999999888643
No 287
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=98.91 E-value=1.2e-09 Score=93.07 Aligned_cols=138 Identities=21% Similarity=0.226 Sum_probs=95.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhC-CC-eEEEEecCCccchhhhhhhcCCCceEEEEccccccc-c------CCCcEE
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDR-GD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-L------LEVDQI 184 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~-G~-~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~-~------~~iD~V 184 (263)
-+.-+|+|||+-|.+|..+++.|..+ |- .|++.+..... + ..+. ..-++-.|+.|.. + ..+|.+
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp--~---~V~~--~GPyIy~DILD~K~L~eIVVn~RIdWL 114 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP--A---NVTD--VGPYIYLDILDQKSLEEIVVNKRIDWL 114 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc--h---hhcc--cCCchhhhhhccccHHHhhccccccee
Confidence 34458999999999999999988876 54 56654432111 1 1111 2234556666541 1 249999
Q ss_pred EEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCCCCcCCCCCCCCCCCCcCccccccC
Q 024766 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGELLAATAVV 263 (263)
Q Consensus 185 i~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~~~~~E~~~~~~~p~~~~~~Y~~sK 263 (263)
||..+.-+... +.+..-+.++|+.|..|+++.|+++..+++.-||+++||+... -..+ ++..-..|++.||.||
T Consensus 115 ~HfSALLSAvG-E~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSP--RNPT--PdltIQRPRTIYGVSK 188 (366)
T KOG2774|consen 115 VHFSALLSAVG-ETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSP--RNPT--PDLTIQRPRTIYGVSK 188 (366)
T ss_pred eeHHHHHHHhc-ccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCC--CCCC--CCeeeecCceeechhH
Confidence 99976533322 3455566789999999999999999889999999999995432 1111 3446789999999987
No 288
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.80 E-value=8.1e-08 Score=87.02 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCCccchhhhhhhcC-CCceEEEEc-ccc--ccccCCCcEEEEc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFR-NPRFELIRH-DVV--EPILLEVDQIYHL 187 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~-~~~v~~~~~-Dv~--~~~~~~iD~Vi~~ 187 (263)
+++++|.|+|++|.||..++..|+.++ .+++++|+. .......++.. ...+.+... |-. .+.+.+.|+||++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVit 83 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLIC 83 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEEC
Confidence 567799999999999999999999655 589999982 22222222211 112222211 211 3577899999999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCccee
Q 024766 188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vy 234 (263)
||... ....+..+.+..|+.++.++++++++++. ++|+++|--+-
T Consensus 84 aG~~~--~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvd 129 (321)
T PTZ00325 84 AGVPR--KPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVN 129 (321)
T ss_pred CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence 98643 22346788899999999999999999997 89999986543
No 289
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.77 E-value=6e-09 Score=88.44 Aligned_cols=119 Identities=18% Similarity=0.112 Sum_probs=78.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccch-hhhhhhcCCCceEEEEccccccc------------cCCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDVVEPI------------LLEV 181 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~~~~~~v~~~~~Dv~~~~------------~~~i 181 (263)
.++.+++||++.+||..++..+..++.+.....+...... +.+... .........+|+++.. -.+.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~-~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr 83 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVA-YGDDFVHVVGDITEEQLLGALREAPRKKGGKR 83 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEE-ecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence 4678999999999999999999999876554433221111 111111 1234455566665542 1358
Q ss_pred cEEEEccCCCCCCC--C-----CCCHHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCccee
Q 024766 182 DQIYHLACPASPVH--Y-----KYNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEVY 234 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~--~-----~~~~~~~~~~Nv~gt~~ll~~a~----~~~--~~iV~vSS~~vy 234 (263)
|+||||||...+.. + .+.+.+.|+.|+++...+.+.+. +.. ..+|++||.+.-
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav 149 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV 149 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh
Confidence 99999999766543 1 12478899999999888777653 332 369999997554
No 290
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.77 E-value=1.7e-08 Score=88.33 Aligned_cols=116 Identities=17% Similarity=0.151 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccccc-----CCCcEEEEcc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL-----LEVDQIYHLA 188 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~-----~~iD~Vi~~A 188 (263)
++|-.+-|.|||||+|+.++.+|.+.|-+|++-.|..+.....+.-.-+..++.+...|+.|+.. ..-++|||..
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI 138 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI 138 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence 56668889999999999999999999999999988644332222211134678888889988854 3479999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcce
Q 024766 189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233 (263)
Q Consensus 189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~v 233 (263)
|--- +...-...++|+.+...+.+.|++.|+ ++|++|+.++
T Consensus 139 Grd~----eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga 180 (391)
T KOG2865|consen 139 GRDY----ETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA 180 (391)
T ss_pred cccc----ccCCcccccccchHHHHHHHHHHhhChhheeehhhccc
Confidence 7321 111112235999999999999999998 9999999753
No 291
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.77 E-value=3.1e-08 Score=91.59 Aligned_cols=122 Identities=21% Similarity=0.240 Sum_probs=79.7
Q ss_pred ccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------ccC----
Q 024766 110 VGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILL---- 179 (263)
Q Consensus 110 ~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------~~~---- 179 (263)
.....+..+|+|+||||.+|+-+++.|+++|+.|.++.|+.++................+..|.... ..+
T Consensus 73 ~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~ 152 (411)
T KOG1203|consen 73 NNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK 152 (411)
T ss_pred CCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccc
Confidence 3344567799999999999999999999999999999997665544433111222223333333222 111
Q ss_pred CCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCccee
Q 024766 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 180 ~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vy 234 (263)
...+++-|+| .....+ +...-+.+...|+.|++++|+..|+ |+|++|+++.-
T Consensus 153 ~~~~v~~~~g--grp~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~ 205 (411)
T KOG1203|consen 153 GVVIVIKGAG--GRPEEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGT 205 (411)
T ss_pred cceeEEeccc--CCCCcc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCc
Confidence 1345555554 222222 1222246889999999999999997 99999887553
No 292
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.75 E-value=2.9e-08 Score=85.36 Aligned_cols=101 Identities=24% Similarity=0.365 Sum_probs=70.6
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccCCCCC
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPASP 193 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag~~~~ 193 (263)
|+|+||||.+|+.+++.|++.+++|.++.|+..... . ..+....++++.+|..|+ .+.++|.||.+.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~--~-~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~- 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDR--A-QQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH- 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH--H-HHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC-
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhh--h-hhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch-
Confidence 789999999999999999999999999999763322 1 111223557778888765 5678999999886433
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCccee
Q 024766 194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vy 234 (263)
. .-.....+++++|++.|+ +||+.|-...+
T Consensus 77 ----~-------~~~~~~~~li~Aa~~agVk~~v~ss~~~~~ 107 (233)
T PF05368_consen 77 ----P-------SELEQQKNLIDAAKAAGVKHFVPSSFGADY 107 (233)
T ss_dssp ----C-------CHHHHHHHHHHHHHHHT-SEEEESEESSGT
T ss_pred ----h-------hhhhhhhhHHHhhhccccceEEEEEecccc
Confidence 1 223345689999999998 66643333334
No 293
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.68 E-value=9.3e-08 Score=79.52 Aligned_cols=96 Identities=13% Similarity=0.061 Sum_probs=67.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------------cCCCcEE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQI 184 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------------~~~iD~V 184 (263)
|+++||||+|++|. +++.|+++|++|++++|+.+...+.....-....+..+.+|+.|+. ...+|++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 47999999987765 9999999999999999865433222221212346788889998762 2357888
Q ss_pred EEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-----eEEEEcCc
Q 024766 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-----KFLLTSTS 231 (263)
Q Consensus 185 i~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-----~iV~vSS~ 231 (263)
|+.+- +.++.++..+|++.+. +++++=.+
T Consensus 80 v~~vh------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~gs 113 (177)
T PRK08309 80 VAWIH------------------SSAKDALSVVCRELDGSSETYRLFHVLGS 113 (177)
T ss_pred EEecc------------------ccchhhHHHHHHHHccCCCCceEEEEeCC
Confidence 87662 2356688899988874 48876433
No 294
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=98.66 E-value=1e-07 Score=82.29 Aligned_cols=120 Identities=16% Similarity=0.137 Sum_probs=86.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCe-----EEEEecCCccchhhhhhhc---C--CCceEEEEcccccc--------
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDE-----VIVIDNFFTGRKDNLVHHF---R--NPRFELIRHDVVEP-------- 176 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~-----V~~l~r~~~~~~~~~~~~~---~--~~~v~~~~~Dv~~~-------- 176 (263)
..|.++|||++++||.+++++|++...+ +++.+|+-++.++....+. . ..+++++..|+++-
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 3578999999999999999999998653 4556777665554433332 2 34788899999775
Q ss_pred ----ccCCCcEEEEccCCCCCCC-------------------------------CCCCHHHHHHHHHHHHHHHHHHHHHc
Q 024766 177 ----ILLEVDQIYHLACPASPVH-------------------------------YKYNPVKTIKTNVMGTLNMLGLAKRV 221 (263)
Q Consensus 177 ----~~~~iD~Vi~~Ag~~~~~~-------------------------------~~~~~~~~~~~Nv~gt~~ll~~a~~~ 221 (263)
.+..+|.|+-|||...... ..++....|++||+|.+.+++.....
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 3346999999999543221 12345667899999999998876432
Q ss_pred ---C-C-eEEEEcCccee
Q 024766 222 ---G-A-KFLLTSTSEVY 234 (263)
Q Consensus 222 ---~-~-~iV~vSS~~vy 234 (263)
+ . ++|.+||...-
T Consensus 162 l~~~~~~~lvwtSS~~a~ 179 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMAR 179 (341)
T ss_pred hhcCCCCeEEEEeecccc
Confidence 2 2 89999997554
No 295
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.57 E-value=4.6e-07 Score=79.04 Aligned_cols=106 Identities=22% Similarity=0.228 Sum_probs=74.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccCCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA 191 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag~~ 191 (263)
++|+||||||++|++++++|+++|++|.++.|+.+...... ..++....|+.+. .+.++|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence 47999999999999999999999999999998755543322 6788888888876 456799999988643
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcceec
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYG 235 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vyg 235 (263)
. .. . ...........+..+.+. .+. +++.+|...+..
T Consensus 75 ~-~~---~--~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~ 112 (275)
T COG0702 75 D-GS---D--AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADA 112 (275)
T ss_pred c-cc---c--chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCC
Confidence 2 11 1 122344444444444444 223 788888776543
No 296
>PLN00106 malate dehydrogenase
Probab=98.56 E-value=1.7e-06 Score=78.45 Aligned_cols=111 Identities=13% Similarity=0.002 Sum_probs=78.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcC-CCceEEEE---ccccccccCCCcEEEEccC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFR-NPRFELIR---HDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~-~~~v~~~~---~Dv~~~~~~~iD~Vi~~Ag 189 (263)
.++|.|||++|.||..++..|+.++. +++++|+.+ ......++.. .....+.. .|...+.+.+.|+||++||
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 35899999999999999999997655 899999865 2221222111 11122221 1112346889999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC
Q 024766 190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST 230 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS 230 (263)
.... ...+..+.+..|+..+.++.+.+++++. .+|+++|
T Consensus 96 ~~~~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvS 135 (323)
T PLN00106 96 VPRK--PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIIS 135 (323)
T ss_pred CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 6433 2356788899999999999999999987 7777766
No 297
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=98.56 E-value=9.6e-08 Score=78.35 Aligned_cols=113 Identities=16% Similarity=0.120 Sum_probs=76.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcCCCceEEEEccc-----cccccCCCcEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-----VEPILLEVDQIY 185 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv-----~~~~~~~iD~Vi 185 (263)
..+++.++|.||||-.|..+++.+++.+. +|+++.|+.....+ . ...+.-...|. ....+.++|+.|
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-t-----~k~v~q~~vDf~Kl~~~a~~~qg~dV~F 88 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-T-----DKVVAQVEVDFSKLSQLATNEQGPDVLF 88 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-c-----cceeeeEEechHHHHHHHhhhcCCceEE
Confidence 35678899999999999999999999986 89999887422111 1 12222222222 223567899999
Q ss_pred EccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCccee
Q 024766 186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY 234 (263)
Q Consensus 186 ~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~vy 234 (263)
++-|-.-. ....+....+...-...+.++|++.|+ +|+++||.++-
T Consensus 89 caLgTTRg---kaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd 135 (238)
T KOG4039|consen 89 CALGTTRG---KAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD 135 (238)
T ss_pred Eeeccccc---ccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC
Confidence 99863211 111222234555556678899999998 99999998763
No 298
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.52 E-value=1.4e-06 Score=79.21 Aligned_cols=112 Identities=14% Similarity=0.079 Sum_probs=73.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC-------CeEEEEecCCcc--chhhhhhhcCCC---ceEEEEccccccccCCCcEE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRG-------DEVIVIDNFFTG--RKDNLVHHFRNP---RFELIRHDVVEPILLEVDQI 184 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G-------~~V~~l~r~~~~--~~~~~~~~~~~~---~v~~~~~Dv~~~~~~~iD~V 184 (263)
.+|+||||+|+||.+++..|+..+ .+++++++.... ......+..... ..+....+-..+.+.++|+|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV 82 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA 82 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence 379999999999999999999854 589999986432 122111111100 00111111122457789999
Q ss_pred EEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcC
Q 024766 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTST 230 (263)
Q Consensus 185 i~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--~iV~vSS 230 (263)
||+||.... ...+..+.++.|+.-...+.+..+++. . .++.+|.
T Consensus 83 I~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 83 ILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred EEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 999986432 234568889999999999999888874 2 5556664
No 299
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.50 E-value=1.5e-06 Score=71.77 Aligned_cols=107 Identities=16% Similarity=0.244 Sum_probs=77.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccCCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA 191 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag~~ 191 (263)
|+|.|+||+|.+|+.++++..++|++|+++.|+..+..+. ..+...+.|+.|. .+.+.|+||..-|..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 4799999999999999999999999999999987654331 3456777777765 456799999887643
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCcc-eecCCC
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSE-VYGDPL 238 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~~-vyg~~~ 238 (263)
.+ +.+. ........+++..+..+. |++.++.++ .|-+++
T Consensus 74 ~~-----~~~~---~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g 114 (211)
T COG2910 74 AS-----DNDE---LHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG 114 (211)
T ss_pred CC-----ChhH---HHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC
Confidence 21 1111 223336678888888887 999998864 454443
No 300
>PRK09620 hypothetical protein; Provisional
Probab=98.40 E-value=3.8e-07 Score=78.87 Aligned_cols=76 Identities=20% Similarity=0.466 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCC----------------ChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEc--cccc
Q 024766 114 RRRLRIVVTGGA----------------GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH--DVVE 175 (263)
Q Consensus 114 ~~~k~vlVTGat----------------G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~--Dv~~ 175 (263)
++||+|+||+|. ||+|.+|+++|+++|++|+++++.......... ....+..+.. |+.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~---~~~~~~~V~s~~d~~~ 77 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN---NQLELHPFEGIIDLQD 77 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC---CceeEEEEecHHHHHH
Confidence 368899999886 999999999999999999999864322111111 1122333444 4433
Q ss_pred c---cc--CCCcEEEEccCCCC
Q 024766 176 P---IL--LEVDQIYHLACPAS 192 (263)
Q Consensus 176 ~---~~--~~iD~Vi~~Ag~~~ 192 (263)
. .+ .++|+|||+|++..
T Consensus 78 ~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 78 KMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHhcccCCCEEEECccccc
Confidence 2 33 35899999999643
No 301
>PRK05086 malate dehydrogenase; Provisional
Probab=98.36 E-value=8.3e-06 Score=73.76 Aligned_cols=111 Identities=19% Similarity=0.118 Sum_probs=74.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHh---CCCeEEEEecCCccchhhhhhhcCCCceEEEE---ccccccccCCCcEEEEccCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLID---RGDEVIVIDNFFTGRKDNLVHHFRNPRFELIR---HDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~---~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~---~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
|+|+|+||+|.||++++..|.. .++++.+++++.. ......+.........+. .+-..+.+.++|+||.++|.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCC
Confidence 5899999999999999998855 2447788887633 221111221111111222 22213456789999999986
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC
Q 024766 191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST 230 (263)
Q Consensus 191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS 230 (263)
... ...+..+.+..|...+.++++.+++.+. ++|.+.|
T Consensus 80 ~~~--~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 80 ARK--PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred CCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 432 2345677889999999999999999886 6666655
No 302
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.28 E-value=3.4e-06 Score=72.98 Aligned_cols=68 Identities=18% Similarity=0.376 Sum_probs=46.0
Q ss_pred EEEE-cCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccc-------cccCCCcEEEEccCC
Q 024766 119 IVVT-GGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-------PILLEVDQIYHLACP 190 (263)
Q Consensus 119 vlVT-GatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~-------~~~~~iD~Vi~~Ag~ 190 (263)
-+|| .++|++|.+|+++|+++|++|++++|....... ....+.++..+..+ ..+.++|+||||||+
T Consensus 18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~------~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAv 91 (229)
T PRK06732 18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPE------PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAV 91 (229)
T ss_pred eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCC------CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCcc
Confidence 3455 568899999999999999999999875321110 11244555444332 234579999999997
Q ss_pred CC
Q 024766 191 AS 192 (263)
Q Consensus 191 ~~ 192 (263)
..
T Consensus 92 sd 93 (229)
T PRK06732 92 SD 93 (229)
T ss_pred CC
Confidence 54
No 303
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.27 E-value=3.4e-06 Score=77.81 Aligned_cols=77 Identities=13% Similarity=0.085 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCCChHHHH--HHHHHHhCCCeEEEEecCCccch-----------hhhhhhc--CCCceEEEEcccccc--
Q 024766 114 RRRLRIVVTGGAGFVGSH--LVDKLIDRGDEVIVIDNFFTGRK-----------DNLVHHF--RNPRFELIRHDVVEP-- 176 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~--l~~~Ll~~G~~V~~l~r~~~~~~-----------~~~~~~~--~~~~v~~~~~Dv~~~-- 176 (263)
..+|++||||++++||.+ +++.| +.|++|+++++..+... +...+.. ....+..+.+|++++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 346899999999999999 89999 99999988875322111 1111111 134567789999875
Q ss_pred ----------ccCCCcEEEEccCCC
Q 024766 177 ----------ILLEVDQIYHLACPA 191 (263)
Q Consensus 177 ----------~~~~iD~Vi~~Ag~~ 191 (263)
.+.++|+||||+|..
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 345699999999865
No 304
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.26 E-value=4e-06 Score=77.45 Aligned_cols=71 Identities=24% Similarity=0.304 Sum_probs=56.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLAC 189 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag 189 (263)
+++|+|.|+ |+||+.++..|+++| .+|++.+|+.++..+..... ..+++....|+.|. .+.+.|+|||++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~--~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI--GGKVEALQVDAADVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc--cccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence 578999997 999999999999999 69999999766544333322 33788888888765 4567899999995
No 305
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.21 E-value=4e-05 Score=61.35 Aligned_cols=112 Identities=14% Similarity=0.109 Sum_probs=78.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhc---CCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
++|.|+|++|.+|.+++..|...+. +++++++..+.......+.. ...........-..+.+.+.|+||..||..
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 4799999999999999999999875 89999987554443333321 111222222223445677899999999854
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
. ....+-.+.++.|..-...+.+..++.+. .++.+|.
T Consensus 81 ~--~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtN 119 (141)
T PF00056_consen 81 R--KPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTN 119 (141)
T ss_dssp S--STTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred c--cccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCC
Confidence 2 23345678889999999999999988875 4555543
No 306
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.15 E-value=5.9e-06 Score=77.10 Aligned_cols=70 Identities=23% Similarity=0.260 Sum_probs=51.5
Q ss_pred cCCCCEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc
Q 024766 113 GRRRLRIVVTGG----------------AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176 (263)
Q Consensus 113 ~~~~k~vlVTGa----------------tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~ 176 (263)
.+++|+++|||| +|.+|.+++++|+++|++|+++++.... . ....+ ...|+.+.
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~-------~~~~~--~~~dv~~~ 254 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P-------TPAGV--KRIDVESA 254 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c-------CCCCc--EEEccCCH
Confidence 468999999999 8889999999999999999999875421 0 01112 23344432
Q ss_pred ---------ccCCCcEEEEccCCCC
Q 024766 177 ---------ILLEVDQIYHLACPAS 192 (263)
Q Consensus 177 ---------~~~~iD~Vi~~Ag~~~ 192 (263)
.+.++|++|||||+..
T Consensus 255 ~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 255 QEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHHHHHHHhcCCCCEEEEcccccc
Confidence 3467999999999743
No 307
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.14 E-value=6.5e-06 Score=69.14 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=53.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccc-----cccCCCcEEEEc
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILLEVDQIYHL 187 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~-----~~~~~iD~Vi~~ 187 (263)
.+++++++|+||+|++|+.+++.|++.|++|+++.|+.++..+................|..+ ..+.+.|+||++
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 467889999999999999999999999999999988754433322222111122333444433 345679999997
Q ss_pred cC
Q 024766 188 AC 189 (263)
Q Consensus 188 Ag 189 (263)
..
T Consensus 105 t~ 106 (194)
T cd01078 105 GA 106 (194)
T ss_pred CC
Confidence 74
No 308
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.10 E-value=1.1e-05 Score=63.93 Aligned_cols=77 Identities=18% Similarity=0.261 Sum_probs=60.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDE-VIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
.+++++++|.|+ |+.|+.++..|.+.|.+ |+++.|+.++.. .+.+.+....+..+..+-....+.+.|+||++.+..
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~-~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAE-ALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSG 86 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHH-HHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHH-HHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCC
Confidence 568899999995 99999999999999995 888888755443 444444566788888877777788999999998644
No 309
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.10 E-value=1.6e-05 Score=75.13 Aligned_cols=76 Identities=20% Similarity=0.201 Sum_probs=57.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
+++|+++|+|+++ +|..+++.|+++|++|+++++......+...+.+....+.++..|..+....++|+||+++|.
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGV 78 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCC
Confidence 5678999999766 999999999999999999998642221111111233356788888888777889999999975
No 310
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.07 E-value=5.7e-05 Score=68.65 Aligned_cols=109 Identities=14% Similarity=0.087 Sum_probs=74.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-------eEEEEecCC--ccchhhhhhhcCC-----CceEEEEccccccccCCCcE
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFF--TGRKDNLVHHFRN-----PRFELIRHDVVEPILLEVDQ 183 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~--~~~~~~~~~~~~~-----~~v~~~~~Dv~~~~~~~iD~ 183 (263)
+|.||||+|.||..++..|+..|. +++++|+.. +.......+.... ..+. +. +-..+.+.++|+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~-i~-~~~~~~~~~aDi 79 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVV-IT-TDPEEAFKDVDV 79 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcE-Ee-cChHHHhCCCCE
Confidence 799999999999999999998654 488888865 3322222221111 1122 22 223456788999
Q ss_pred EEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcC
Q 024766 184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTST 230 (263)
Q Consensus 184 Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--~iV~vSS 230 (263)
|||.||... ....+-.+.+..|+.-...+....++.+ . .++.+|.
T Consensus 80 VVitAG~~~--~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN 127 (323)
T cd00704 80 AILVGAFPR--KPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGN 127 (323)
T ss_pred EEEeCCCCC--CcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 999999643 2345667889999999999999998884 4 4555553
No 311
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.03 E-value=1.2e-05 Score=69.48 Aligned_cols=91 Identities=11% Similarity=0.180 Sum_probs=53.1
Q ss_pred EEE-cCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-------ccCCCcEEEEccCCC
Q 024766 120 VVT-GGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-------ILLEVDQIYHLACPA 191 (263)
Q Consensus 120 lVT-GatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-------~~~~iD~Vi~~Ag~~ 191 (263)
+|| .++|+||.+++++|+++|++|+++++... . ... ....+++...+-.+. .+..+|++|||||+.
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l----~~~-~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L----KPE-PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS 91 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c----ccc-cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec
Confidence 455 45899999999999999999999875211 1 000 011233333222221 345699999999975
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHHHHH
Q 024766 192 SPVHY-KYNPVKTIKTNVMGTLNMLG 216 (263)
Q Consensus 192 ~~~~~-~~~~~~~~~~Nv~gt~~ll~ 216 (263)
..... ..+.+++.+++..+++.+.+
T Consensus 92 d~~~~~~~s~e~~~~~~~~~~~~~~~ 117 (227)
T TIGR02114 92 DYTPVYMTDLEQVQASDNLNEFLSKQ 117 (227)
T ss_pred cccchhhCCHHHHhhhcchhhhhccc
Confidence 43332 22344444555555555443
No 312
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.02 E-value=8.6e-06 Score=74.26 Aligned_cols=75 Identities=20% Similarity=0.325 Sum_probs=51.3
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhC-C-CeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDR-G-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~-G-~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
..+++|+|+||||+|+||+.++++|+++ | .+++++.|+.....+ +...+.... .. | .+..+.++|+|||+++
T Consensus 151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~-La~el~~~~--i~--~-l~~~l~~aDiVv~~ts 224 (340)
T PRK14982 151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQE-LQAELGGGK--IL--S-LEEALPEADIVVWVAS 224 (340)
T ss_pred cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHH-HHHHhcccc--HH--h-HHHHHccCCEEEECCc
Confidence 3578899999999999999999999865 5 488888876443332 222211111 11 2 2356678999999997
Q ss_pred CCC
Q 024766 190 PAS 192 (263)
Q Consensus 190 ~~~ 192 (263)
...
T Consensus 225 ~~~ 227 (340)
T PRK14982 225 MPK 227 (340)
T ss_pred CCc
Confidence 543
No 313
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.99 E-value=2.2e-05 Score=72.88 Aligned_cols=89 Identities=27% Similarity=0.303 Sum_probs=60.6
Q ss_pred EEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----ccCCCcEEEEccCCC
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA 191 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~~~~iD~Vi~~Ag~~ 191 (263)
|+|.|+ |++|+.+++.|++.+. +|++.+|+.++..+..... ...++.....|+.|. .+.+.|+||||+|+.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 689999 9999999999999975 7999998766544443332 567899999999875 456799999999753
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL 227 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~ 227 (263)
. ...++++|.+.|+++|-
T Consensus 79 ~------------------~~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 79 F------------------GEPVARACIEAGVHYVD 96 (386)
T ss_dssp G------------------HHHHHHHHHHHT-EEEE
T ss_pred h------------------hHHHHHHHHHhCCCeec
Confidence 1 11466666666666555
No 314
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.95 E-value=0.00023 Score=64.54 Aligned_cols=111 Identities=18% Similarity=0.210 Sum_probs=80.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcCC----CceEEEEccccccccCCCcEEEEcc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN----PRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~----~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
.+++|.|+|+ |.||..++..|+..|. ++.++|++.+.......+.... ..+.+...| -+.+.+.|+||..|
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~--~~~~~~adivIita 81 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGD--YSDCKDADLVVITA 81 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCC--HHHhCCCCEEEEec
Confidence 4569999997 9999999999999987 8999998766655444443211 233343322 24578999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
|.... ...+-.+.+..|..-...+++.+++.+. .++.+|.
T Consensus 82 g~~~k--~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsN 123 (315)
T PRK00066 82 GAPQK--PGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASN 123 (315)
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 86422 2345567889999999999999888764 5666654
No 315
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.90 E-value=0.0003 Score=63.39 Aligned_cols=109 Identities=20% Similarity=0.236 Sum_probs=77.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCCccchhhhhhhcC-----CCceEEEEccccccccCCCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFR-----NPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~-----~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
++|.|.| +|.+|..++..|+..| .++++++++.+.......+... .........|. ..+.+.|+||+++|
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~--~~l~~aDIVIitag 77 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDY--SDCKDADIVVITAG 77 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCH--HHhCCCCEEEEccC
Confidence 3789999 5999999999999999 5899999976655443333211 12233332222 34689999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
.... ...+-.+.+..|..-...+.+.+++.+. .++.+|.
T Consensus 78 ~~~~--~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 78 APQK--PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 5422 2345567889999999999999988864 5666654
No 316
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.87 E-value=0.00034 Score=63.26 Aligned_cols=110 Identities=15% Similarity=0.090 Sum_probs=74.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCC--ccchhhhhhhc-----CCCceEEEE-ccccccccCCCcEEEE
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFF--TGRKDNLVHHF-----RNPRFELIR-HDVVEPILLEVDQIYH 186 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~--~~~~~~~~~~~-----~~~~v~~~~-~Dv~~~~~~~iD~Vi~ 186 (263)
++|.|+|++|.+|..++..|+..|. +|+++++.. +.......++. ......+.. .| ...+.+.|+||-
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d--~~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD--LSDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC--HHHhCCCCEEEE
Confidence 4799999999999999999999986 599999843 22222222211 111222222 23 235889999999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
++|... ....+-.+.+..|+.-...+.+.+.+.+. .+|.+++
T Consensus 79 tag~p~--~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 79 TAGVPR--KEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred ecCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 998532 22234467778999999999998877753 6666665
No 317
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.87 E-value=0.00016 Score=65.69 Aligned_cols=111 Identities=14% Similarity=0.075 Sum_probs=73.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-------eEEEEecCCcc--chhhhhhhcCCC---ceEEEEccccccccCCCcEEE
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFTG--RKDNLVHHFRNP---RFELIRHDVVEPILLEVDQIY 185 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~--~~~~~~~~~~~~---~v~~~~~Dv~~~~~~~iD~Vi 185 (263)
+|.|+|++|.||..++..|+..+. +++++|+.+.. ......++.... .......+-....+.+.|+||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 489999999999999999998554 58888875442 222222211111 000111111235678899999
Q ss_pred EccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcC
Q 024766 186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTST 230 (263)
Q Consensus 186 ~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--~iV~vSS 230 (263)
++||.... ...+..+.+..|+.-...+.+..++++ . .++.+|.
T Consensus 81 itAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN 126 (324)
T TIGR01758 81 LVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN 126 (324)
T ss_pred EcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 99986422 234578889999999999999998884 4 5555554
No 318
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.86 E-value=0.00033 Score=63.64 Aligned_cols=111 Identities=14% Similarity=0.069 Sum_probs=76.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-------eEEEEecCCcc--chhhhhhhcCC-----CceEEEEccccccccCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFTG--RKDNLVHHFRN-----PRFELIRHDVVEPILLEV 181 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~--~~~~~~~~~~~-----~~v~~~~~Dv~~~~~~~i 181 (263)
.++|.|+|++|.||..++..|+..|. +++++|..... ......++... ..+.+. .+ ....+.+.
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~~-~~~~~~da 79 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-DD-PNVAFKDA 79 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-cC-cHHHhCCC
Confidence 45899999999999999999998876 68888885332 23222222111 123322 21 23567889
Q ss_pred cEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcC
Q 024766 182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTST 230 (263)
Q Consensus 182 D~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--~iV~vSS 230 (263)
|+||.+||.... ...+-.+.++.|+.-...+....++++ . .++.+|.
T Consensus 80 DivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (322)
T cd01338 80 DWALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN 129 (322)
T ss_pred CEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 999999986432 234567789999999999999998877 3 5556654
No 319
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=97.79 E-value=0.00029 Score=60.41 Aligned_cols=116 Identities=13% Similarity=0.094 Sum_probs=78.7
Q ss_pred cCCCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCC-CceEEEEcccccc------------c
Q 024766 113 GRRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVVEP------------I 177 (263)
Q Consensus 113 ~~~~k~vlVTGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~------------~ 177 (263)
.++||+++|+|- ...|+..+++.|.++|+++...+..+ +....+.+..+. ....++.||+.+. .
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~ 81 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK 81 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence 578999999996 57899999999999999999887654 344444444322 2345789999876 3
Q ss_pred cCCCcEEEEccCCCCCC----CC----CCCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEc
Q 024766 178 LLEVDQIYHLACPASPV----HY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTS 229 (263)
Q Consensus 178 ~~~iD~Vi~~Ag~~~~~----~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~iV~vS 229 (263)
..++|.|||+.|+..-. .+ .+++...+++-..+...+.++++.. |..+|-.+
T Consensus 82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt 144 (259)
T COG0623 82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT 144 (259)
T ss_pred hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE
Confidence 35699999999875421 12 2234455566666666677776543 33555443
No 320
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.79 E-value=0.00052 Score=62.05 Aligned_cols=110 Identities=14% Similarity=0.044 Sum_probs=76.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcCC-CceEEEE--c-cccccccCCCcEEEEccCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN-PRFELIR--H-DVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~-~~v~~~~--~-Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
++|.|+|++|.||..++..|+.+|. +++++|.+ .......++... ....+.. . |-.-+.+.+.|+||-+||.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~ 78 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGV 78 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCC
Confidence 4789999999999999999998874 88999886 222222222111 1122222 2 1123568899999999986
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
.- ....+-.+.++.|..-...+.+..++.+. .++.+|.
T Consensus 79 ~~--k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN 118 (310)
T cd01337 79 PR--KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN 118 (310)
T ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 32 23445678899999999999999988875 5666665
No 321
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.76 E-value=0.0002 Score=65.48 Aligned_cols=105 Identities=20% Similarity=0.292 Sum_probs=70.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCcc--------------------ch----hhhhhhcCCCceE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTG--------------------RK----DNLVHHFRNPRFE 167 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~--------------------~~----~~~~~~~~~~~v~ 167 (263)
.++.++|+|.| .|++|.++++.|+..|. +++++|+..-+ +. +.+.++-...+++
T Consensus 21 ~L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 46778999999 68899999999999998 88888876311 00 1111221344566
Q ss_pred EEEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 168 LIRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 168 ~~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
.+..|++. ..+.+.|+||.+. ++++ ++ ..+-+.|.+.++.+|+.+..+.+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~DlVid~~---------D~~~----~r----~~in~~~~~~~ip~i~~~~~g~~G 154 (338)
T PRK12475 100 PVVTDVTVEELEELVKEVDLIIDAT---------DNFD----TR----LLINDLSQKYNIPWIYGGCVGSYG 154 (338)
T ss_pred EEeccCCHHHHHHHhcCCCEEEEcC---------CCHH----HH----HHHHHHHHHcCCCEEEEEecccEE
Confidence 66666653 3456799999988 1221 11 224467778888899888877766
No 322
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.74 E-value=9e-05 Score=66.32 Aligned_cols=77 Identities=10% Similarity=0.129 Sum_probs=52.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEecCCc--cchhhhhhhcC--CCceEEEEcccccc-----ccCCCc
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDE-VIVIDNFFT--GRKDNLVHHFR--NPRFELIRHDVVEP-----ILLEVD 182 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~--~~~~~~~~~~~--~~~v~~~~~Dv~~~-----~~~~iD 182 (263)
..++|+++|+|| |++|++++..|++.|++ |++++|+.+ .+.+.+.+.+. ...+.....|+.+. .+...|
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D 201 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD 201 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence 357889999997 89999999999999995 999998752 22222222221 12334444565432 345689
Q ss_pred EEEEccCC
Q 024766 183 QIYHLACP 190 (263)
Q Consensus 183 ~Vi~~Ag~ 190 (263)
+||||..+
T Consensus 202 ilINaTp~ 209 (289)
T PRK12548 202 ILVNATLV 209 (289)
T ss_pred EEEEeCCC
Confidence 99999754
No 323
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.72 E-value=1.3e-05 Score=74.60 Aligned_cols=71 Identities=23% Similarity=0.278 Sum_probs=49.2
Q ss_pred cCCCCEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccc--
Q 024766 113 GRRRLRIVVTGG----------------AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV-- 174 (263)
Q Consensus 113 ~~~~k~vlVTGa----------------tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~-- 174 (263)
.+++|+++|||| +|.+|.+++++|..+|++|+++.+..... ....+.. .|+.
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--------~~~~~~~--~~v~~~ 251 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--------TPPGVKS--IKVSTA 251 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--------CCCCcEE--EEeccH
Confidence 478999999998 35699999999999999999988654321 0111222 2221
Q ss_pred ----c----cccCCCcEEEEccCCCCC
Q 024766 175 ----E----PILLEVDQIYHLACPASP 193 (263)
Q Consensus 175 ----~----~~~~~iD~Vi~~Ag~~~~ 193 (263)
+ ....++|++|||||+...
T Consensus 252 ~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 252 EEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred HHHHHHHHHhhcccCCEEEEccccccc
Confidence 1 123468999999997543
No 324
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.71 E-value=0.00052 Score=61.82 Aligned_cols=110 Identities=18% Similarity=0.139 Sum_probs=75.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcCC-----CceEEEEccccccccCCCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN-----PRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~-----~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
++|.|+|+ |.||+.++..|+.++. +++++++..+.......+.... .... +..|-.-+.+.+.|+|+-.||
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~-i~~~~~y~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVK-ITGDGDYEDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceE-EecCCChhhhcCCCEEEEeCC
Confidence 47999998 9999999999988864 8999998754444333333211 1222 222222457788999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC
Q 024766 190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST 230 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS 230 (263)
..- ....+-.+.++.|..-...+.+...+.+. -++++-|
T Consensus 79 ~pr--KpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt 118 (313)
T COG0039 79 VPR--KPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT 118 (313)
T ss_pred CCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence 543 23345577889999999999999988875 4444433
No 325
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.69 E-value=0.00023 Score=67.23 Aligned_cols=76 Identities=16% Similarity=0.064 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccC-CCcEEEEccCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL-EVDQIYHLACPA 191 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~-~iD~Vi~~Ag~~ 191 (263)
+++|+++|||++| +|.+.++.|++.|++|++.++............ ....+.+..++....... ++|+||+++|+.
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~ 79 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQEL-LEEGIKVICGSHPLELLDEDFDLMVKNPGIP 79 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHH-HhcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence 4678999999876 999999999999999999987643322222222 222344444332222233 499999999864
No 326
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.64 E-value=0.00041 Score=63.51 Aligned_cols=107 Identities=21% Similarity=0.293 Sum_probs=71.8
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCcc--------------------chh----hhhhhcCCCce
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTG--------------------RKD----NLVHHFRNPRF 166 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~--------------------~~~----~~~~~~~~~~v 166 (263)
..++.++|+|.| .|++|.++++.|+..|. ++.++|...-+ +.+ .+.++-....+
T Consensus 20 ~~L~~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v 98 (339)
T PRK07688 20 QKLREKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV 98 (339)
T ss_pred HHhcCCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence 346778999999 59999999999999999 89999875211 001 11111123345
Q ss_pred EEEEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 167 ELIRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 167 ~~~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
+.+..+++. +.+.+.|+||.+. +++ ..-..+.++|.+.++.+|+.++.+.||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~DlVid~~---------Dn~--------~~r~~ln~~~~~~~iP~i~~~~~g~~G~ 155 (339)
T PRK07688 99 EAIVQDVTAEELEELVTGVDLIIDAT---------DNF--------ETRFIVNDAAQKYGIPWIYGACVGSYGL 155 (339)
T ss_pred EEEeccCCHHHHHHHHcCCCEEEEcC---------CCH--------HHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence 566656644 2456789999987 122 2222466778888889999888877773
No 327
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.60 E-value=0.0013 Score=62.22 Aligned_cols=112 Identities=10% Similarity=0.075 Sum_probs=81.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-------CC--eEEEEecCCccchhhhhhhcCC-----CceEEEEccccccccCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDR-------GD--EVIVIDNFFTGRKDNLVHHFRN-----PRFELIRHDVVEPILLE 180 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~-------G~--~V~~l~r~~~~~~~~~~~~~~~-----~~v~~~~~Dv~~~~~~~ 180 (263)
+.-+|.|+|++|.||.+++..|+.. |. +++.++++.+.......++... .++.+. .+ .-+.+.+
T Consensus 99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~~-~ye~~kd 176 (444)
T PLN00112 99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-ID-PYEVFQD 176 (444)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-cC-CHHHhCc
Confidence 3458999999999999999999988 65 7889998877766655554321 122222 22 2357789
Q ss_pred CcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCC--eEEEEcC
Q 024766 181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR-VGA--KFLLTST 230 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~--~iV~vSS 230 (263)
.|+||-.||... ....+-.+.++.|+.-...+.+...+ .+. .||.+|.
T Consensus 177 aDiVVitAG~pr--kpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN 227 (444)
T PLN00112 177 AEWALLIGAKPR--GPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN 227 (444)
T ss_pred CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence 999999998632 23445678899999999999999988 454 5666664
No 328
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.59 E-value=0.0013 Score=59.55 Aligned_cols=109 Identities=14% Similarity=0.016 Sum_probs=74.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcCC-CceEEEE--cc-ccccccCCCcEEEEccCCC
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN-PRFELIR--HD-VVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~-~~v~~~~--~D-v~~~~~~~iD~Vi~~Ag~~ 191 (263)
+|.|+|++|.||..++..|+.++. +++++|+.. . .....+.... ....+.. .| ...+.+.+.|+||.+||..
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a-~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~ 78 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-A-AGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVP 78 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-C-cEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCC
Confidence 478999999999999999998875 788888865 2 2222222111 1122222 11 1235788999999999864
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
.. ...+-.+.+..|+.-...+.+..++.+. .++.+|.
T Consensus 79 ~~--~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN 117 (312)
T TIGR01772 79 RK--PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN 117 (312)
T ss_pred CC--CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 22 2345677889999999999999888874 5566655
No 329
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.55 E-value=0.00092 Score=62.15 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecCCccchhhhhhhcCC-CceEEE-EccccccccCCCcEEEEccCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRN-PRFELI-RHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~-~~v~~~-~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
.+.++|.|.||||++|.+|++.|+++ +.++..+.+....- +.+...... ...+.. ..++....+.++|+||-+.+.
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~ 114 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG-QSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH 114 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-CCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence 35679999999999999999999998 55888887643221 111111100 000111 112222235789999998742
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
. ...+++..+ +.++++|-.|+..-+.+
T Consensus 115 ~------------------~s~~i~~~~-~~g~~VIDlSs~fRl~~ 141 (381)
T PLN02968 115 G------------------TTQEIIKAL-PKDLKIVDLSADFRLRD 141 (381)
T ss_pred H------------------HHHHHHHHH-hCCCEEEEcCchhccCC
Confidence 1 344566665 45679999999876543
No 330
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.52 E-value=0.00049 Score=54.32 Aligned_cols=102 Identities=21% Similarity=0.345 Sum_probs=67.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch----------------------hhhhhhcCCCceEEEEcc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK----------------------DNLVHHFRNPRFELIRHD 172 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~v~~~~~D 172 (263)
.++|+|.| .|++|.++++.|+..|. +++++|...=... +.+.+.....++..+..+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 46899999 79999999999999999 7888875411100 111112234466677666
Q ss_pred ccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 173 VVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 173 v~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
+.+ ..+.+.|+||.+.. + ...-..+.+.+++.+..+|..++.+.+|
T Consensus 81 ~~~~~~~~~~~~~d~vi~~~d---------~--------~~~~~~l~~~~~~~~~p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 IDEENIEELLKDYDIVIDCVD---------S--------LAARLLLNEICREYGIPFIDAGVNGFYG 130 (135)
T ss_dssp CSHHHHHHHHHTSSEEEEESS---------S--------HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred cccccccccccCCCEEEEecC---------C--------HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence 633 24557999999872 1 1222346678888888899888877666
No 331
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.50 E-value=0.0021 Score=58.20 Aligned_cols=109 Identities=14% Similarity=0.121 Sum_probs=75.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcCC----CceEEEE-ccccccccCCCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN----PRFELIR-HDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~----~~v~~~~-~Dv~~~~~~~iD~Vi~~Ag 189 (263)
++|.|+|+ |.||..++..|+..|. +++++|.+.+.......++... ....+.. .|.. .+.+.|+||.+||
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~--~~~~adivvitaG 80 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS--VTANSKVVIVTAG 80 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH--HhCCCCEEEECCC
Confidence 48999995 9999999999998875 7899998765444443333211 1113332 3332 4789999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
.... ...+-.+.+..|..-...+.+..++.+. .++++|.
T Consensus 81 ~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 121 (312)
T cd05293 81 ARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN 121 (312)
T ss_pred CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence 6432 2345567789999999999999888864 5556654
No 332
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.50 E-value=0.0026 Score=57.87 Aligned_cols=109 Identities=16% Similarity=0.094 Sum_probs=75.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-------eEEEEecCCc--cchhhhhhhcCC-----CceEEEEccccccccCCCc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFT--GRKDNLVHHFRN-----PRFELIRHDVVEPILLEVD 182 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~--~~~~~~~~~~~~-----~~v~~~~~Dv~~~~~~~iD 182 (263)
.+|.|+|++|+||..++..|+..|. +++++|.... .......+.... ..+.+ ..+ ..+.+.+.|
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~~-~~~~~~daD 81 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-TTD-PEEAFKDVD 81 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-ecC-hHHHhCCCC
Confidence 4899999999999999999998874 7888888542 233333322211 11222 121 235678899
Q ss_pred EEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEc
Q 024766 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA---KFLLTS 229 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~---~iV~vS 229 (263)
+||.+||... ....+-.+.+..|..-...+...+++++. .++.+|
T Consensus 82 vVVitAG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 82 AALLVGAFPR--KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred EEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 9999998642 23456778899999999999999988763 455555
No 333
>PRK05442 malate dehydrogenase; Provisional
Probab=97.48 E-value=0.0023 Score=58.25 Aligned_cols=112 Identities=13% Similarity=0.053 Sum_probs=75.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-------eEEEEecCCcc--chhhhhhhcCC-----CceEEEEccccccccCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFTG--RKDNLVHHFRN-----PRFELIRHDVVEPILLE 180 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~--~~~~~~~~~~~-----~~v~~~~~Dv~~~~~~~ 180 (263)
+.++|.|+|++|.||..++..|+..|. +++++|+.+.. ......+.... ..+.+. .-..+.+.+
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~~~~d 80 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNVAFKD 80 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHHHhCC
Confidence 456899999999999999999988654 68888875432 22222222111 122222 122356788
Q ss_pred CcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcC
Q 024766 181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTST 230 (263)
Q Consensus 181 iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--~iV~vSS 230 (263)
.|+||-+||... ....+-.+.+..|..-...+.+..+++. . .++.+|.
T Consensus 81 aDiVVitaG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN 131 (326)
T PRK05442 81 ADVALLVGARPR--GPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN 131 (326)
T ss_pred CCEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 999999998532 2345667889999999999999998854 2 5666664
No 334
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.48 E-value=0.0024 Score=49.44 Aligned_cols=96 Identities=20% Similarity=0.246 Sum_probs=56.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcC--CCceEEEEccccccccCCCcEEEEccCCCCCC
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR--NPRFELIRHDVVEPILLEVDQIYHLACPASPV 194 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~~~ 194 (263)
+|.|.||||++|++|++.|++.-. +++.+..+.......+..... ....++...|.....+.++|+||.|.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~---- 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPH---- 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCH----
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCch----
Confidence 689999999999999999999644 655544433322222222211 1112222223333456889999999831
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCc
Q 024766 195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS 231 (263)
Q Consensus 195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~ 231 (263)
.....+...+.+.|+++|=.|+.
T Consensus 77 --------------~~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 77 --------------GASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp --------------HHHHHHHHHHHHTTSEEEESSST
T ss_pred --------------hHHHHHHHHHhhCCcEEEeCCHH
Confidence 01234556667777777766665
No 335
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.44 E-value=0.002 Score=57.98 Aligned_cols=110 Identities=14% Similarity=0.092 Sum_probs=73.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcC-----CCceEEE-EccccccccCCCcEEEEcc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR-----NPRFELI-RHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~-----~~~v~~~-~~Dv~~~~~~~iD~Vi~~A 188 (263)
+++|.|+|+ |.+|..++..++..|. +|++++++++.......+... .....+. ..|. ..+.+.|+||.++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~--~~~~~aDiVii~~ 78 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY--EDIAGSDVVVITA 78 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH--HHHCCCCEEEECC
Confidence 468999997 9999999999999875 999999976654333322111 1112222 1233 3478899999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
|... ....+-.+.+.-|+.-...+++.+.+... .+|++|.
T Consensus 79 ~~p~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN 120 (307)
T PRK06223 79 GVPR--KPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN 120 (307)
T ss_pred CCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 8543 22334566778888888888888877653 4555553
No 336
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.44 E-value=0.00058 Score=57.17 Aligned_cols=61 Identities=26% Similarity=0.360 Sum_probs=37.9
Q ss_pred CCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-------ccCCCcEEEEccCCCC
Q 024766 124 GAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-------ILLEVDQIYHLACPAS 192 (263)
Q Consensus 124 atG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-------~~~~iD~Vi~~Ag~~~ 192 (263)
++|-.|.+|++++..+|++|+++..... .. ....+..+..+-.++ .+.+.|++|++|++..
T Consensus 27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-------~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 27 SSGKMGAALAEEAARRGAEVTLIHGPSS-LP-------PPPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCcc-cc-------ccccceEEEecchhhhhhhhccccCcceeEEEecchhh
Confidence 4799999999999999999999986521 10 133566666654433 3456799999998644
No 337
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.44 E-value=0.0048 Score=56.04 Aligned_cols=112 Identities=11% Similarity=0.118 Sum_probs=75.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCccchhhhhhhcC-----CCceEEEEccccccccCCCcEEEEcc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFR-----NPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~-----~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
+.++|.|+|| |.+|..++..++..| .+++++|++.+.......+... .....+...+-. +.+.+.|+||.++
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~~l~~ADiVVita 81 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY-EDIKDSDVVVITA 81 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH-HHhCCCCEEEECC
Confidence 4568999996 999999999999988 6899999876543322221111 112222221212 2678899999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
|.... ...+-.+.+..|..-...+.+.+.+.+. .++++|.
T Consensus 82 g~~~~--~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 82 GVQRK--EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 85432 2344567788999888888888887764 4666655
No 338
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.44 E-value=0.00094 Score=56.63 Aligned_cols=105 Identities=14% Similarity=0.162 Sum_probs=67.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccc------------------hhh----hhhhcCCCceEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGR------------------KDN----LVHHFRNPRFELI 169 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~------------------~~~----~~~~~~~~~v~~~ 169 (263)
.++.++|+|.| .|++|.++++.|+..|. +++++|...-.. .+. +.+.-...+++.+
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 96 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL 96 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 46778999999 79999999999999998 888888652110 011 1111122344444
Q ss_pred Eccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 170 ~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
..++.+ ..+.+.|+||.+.. ++. .-..+-+.|.+.++.+|+.++.+.+|
T Consensus 97 ~~~i~~~~~~~~~~~~D~Vi~~~d---------~~~--------~r~~l~~~~~~~~ip~i~~~~~g~~G 149 (202)
T TIGR02356 97 KERVTAENLELLINNVDLVLDCTD---------NFA--------TRYLINDACVALGTPLISAAVVGFGG 149 (202)
T ss_pred hhcCCHHHHHHHHhCCCEEEECCC---------CHH--------HHHHHHHHHHHcCCCEEEEEeccCeE
Confidence 444432 24567999999872 221 12235577788888888888766665
No 339
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.43 E-value=0.0038 Score=56.37 Aligned_cols=109 Identities=17% Similarity=0.212 Sum_probs=75.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCCccchhhhhhhcCC----CceEEEEccccccccCCCcEEEEccCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFRN----PRFELIRHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~~----~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
++|.|.|+ |.+|..++..|+.+| .+|.+++++.+.......+.... ........|. +.+.+.|++|.+++.
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~--~~l~~aDiViita~~ 77 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDY--ADCKGADVVVITAGA 77 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCH--HHhCCCCEEEEccCC
Confidence 36899996 999999999999999 58999998765444333222211 1223333343 357889999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
.. ....+..+.+..|+.-...+++.+++.+. .++.++.
T Consensus 78 ~~--~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tN 117 (308)
T cd05292 78 NQ--KPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTN 117 (308)
T ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 32 22345667788999999999998887764 4555543
No 340
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.43 E-value=0.0008 Score=61.48 Aligned_cols=93 Identities=22% Similarity=0.231 Sum_probs=58.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS 192 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~ 192 (263)
+++|+|.||||++|.+|++.|.++|+ ++..+.+....-+. +. +.. .+....|+.+..+.++|+||.++|..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~-l~--~~g--~~i~v~d~~~~~~~~vDvVf~A~g~g- 74 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE-LS--FKG--KELKVEDLTTFDFSGVDIALFSAGGS- 74 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe-ee--eCC--ceeEEeeCCHHHHcCCCEEEECCChH-
Confidence 46899999999999999999999876 44666554222111 11 122 23444466555567899999988521
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCc
Q 024766 193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS 231 (263)
Q Consensus 193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~ 231 (263)
-+..+...+.+.|+.||=.|+.
T Consensus 75 -----------------~s~~~~~~~~~~G~~VIDlS~~ 96 (334)
T PRK14874 75 -----------------VSKKYAPKAAAAGAVVIDNSSA 96 (334)
T ss_pred -----------------HHHHHHHHHHhCCCEEEECCch
Confidence 1223445555567666666664
No 341
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.40 E-value=0.0037 Score=55.00 Aligned_cols=110 Identities=17% Similarity=0.085 Sum_probs=76.2
Q ss_pred EEEEcCCChHHHHHHHHHHhCC----CeEEEEecCCccchhhhhhhc---CCC-ceEEEEccccccccCCCcEEEEccCC
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRG----DEVIVIDNFFTGRKDNLVHHF---RNP-RFELIRHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G----~~V~~l~r~~~~~~~~~~~~~---~~~-~v~~~~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
|.|+||+|.+|..++..|+..| .+++++|++++.......+.. ... ...+...+-..+.+.+.|+||..+|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 4689998999999999999998 699999987755544333321 111 22333333334678899999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
.... ...-......|+.-...+.+.+++.+. .++++|.
T Consensus 81 ~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tN 120 (263)
T cd00650 81 GRKP--GMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSN 120 (263)
T ss_pred CCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 4322 234456678899999999999888764 5555543
No 342
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.39 E-value=0.0044 Score=56.01 Aligned_cols=108 Identities=19% Similarity=0.226 Sum_probs=76.1
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcC------CCceEEEEccccccccCCCcEEEEccC
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFR------NPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~------~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
+|.|.|+ |.||..++..|+.++. +++++|...+.......+... ...+.+...| -+.+.+.|+||-.||
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~--y~~~~~aDivvitaG 77 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD--YDDCADADIIVITAG 77 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC--HHHhCCCCEEEECCC
Confidence 4788896 9999999999998876 799999876655444433321 1234444433 356788999999998
Q ss_pred CCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 190 PASPVHYKYN--PVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 190 ~~~~~~~~~~--~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
..... ..+ -.+.+..|..-...+....++++. .++.+|-
T Consensus 78 ~~~kp--g~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsN 120 (307)
T cd05290 78 PSIDP--GNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITN 120 (307)
T ss_pred CCCCC--CCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 64222 223 367789999999999999988875 4444544
No 343
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.38 E-value=0.00052 Score=61.02 Aligned_cols=76 Identities=17% Similarity=0.233 Sum_probs=51.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
.+++++++|+|+ |++|++++..|.+.| .+|++++|+.++..+..........+.+ ..|. ...+.+.|+|||+....
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~-~~~~~~~DivInaTp~g 196 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL-QEELADFDLIINATSAG 196 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc-hhccccCCEEEECCcCC
Confidence 467889999995 999999999999999 6999999876544333222211111222 1121 24456799999997643
No 344
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.37 E-value=0.00062 Score=60.24 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
.++|+++|+|+ |++|++++..|++.|++|++++|+.++..+..........+..... .+....+.|+|||+.+..
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~--~~~~~~~~DivInatp~g 189 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM--DELPLHRVDLIINATSAG 189 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech--hhhcccCccEEEECCCCC
Confidence 45789999996 8999999999999999999998875544333222211112222222 223345799999998753
No 345
>PLN02602 lactate dehydrogenase
Probab=97.36 E-value=0.0042 Score=57.15 Aligned_cols=109 Identities=15% Similarity=0.177 Sum_probs=76.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcCC----CceEEEE-ccccccccCCCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN----PRFELIR-HDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~----~~v~~~~-~Dv~~~~~~~iD~Vi~~Ag 189 (263)
++|.|+|+ |.||..++..|+..|. +++++|.+.+.......+.... ....+.. .|. ..+.+.|+||-+||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy--~~~~daDiVVitAG 114 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDY--AVTAGSDLCIVTAG 114 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCH--HHhCCCCEEEECCC
Confidence 58999995 9999999999998875 7999998766554444333211 1223322 232 34789999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
.... ...+-.+.+..|+.-...+.+..++.+. .++++|-
T Consensus 115 ~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN 155 (350)
T PLN02602 115 ARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN 155 (350)
T ss_pred CCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 6422 2345567789999999999999888764 5666664
No 346
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.36 E-value=0.0077 Score=54.76 Aligned_cols=114 Identities=11% Similarity=0.086 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhc-----CCCceEEEE-ccccccccCCCcEEEE
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHF-----RNPRFELIR-HDVVEPILLEVDQIYH 186 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~-----~~~~v~~~~-~Dv~~~~~~~iD~Vi~ 186 (263)
.+.++|.|+| +|.+|..++..++..|. +|+++|.+++.......+.. ......+.. .|. +.+.+.|+||.
T Consensus 4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~--~~l~~aDiVI~ 80 (321)
T PTZ00082 4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY--EDIAGSDVVIV 80 (321)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH--HHhCCCCEEEE
Confidence 3456899999 69999999999999995 89999987764322222111 112233332 343 46789999999
Q ss_pred ccCCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 187 LACPASPVH---YKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 187 ~Ag~~~~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
+||...... .+.+-.+.+..|+.-...+.+.+.+.+. .++++|.
T Consensus 81 tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 81 TAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 998643221 1225567788899888888888887764 5666654
No 347
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.35 E-value=0.0016 Score=57.36 Aligned_cols=68 Identities=16% Similarity=0.291 Sum_probs=45.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc-----c--cCCCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----I--LLEVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-----~--~~~iD~Vi~~Ag 189 (263)
++|+|+||||. |+.++++|.++|++|++..+.......... .....+..+..+. . -.++|+||+.+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-----~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-----HQALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-----cCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 47999999999 999999999999999998887554322111 1111222222222 1 235999999985
Q ss_pred C
Q 024766 190 P 190 (263)
Q Consensus 190 ~ 190 (263)
+
T Consensus 75 P 75 (256)
T TIGR00715 75 P 75 (256)
T ss_pred H
Confidence 3
No 348
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.32 E-value=0.0014 Score=56.51 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=66.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccc------------------hhh----hhhhcCCCceEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGR------------------KDN----LVHHFRNPRFELI 169 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~------------------~~~----~~~~~~~~~v~~~ 169 (263)
.++.++|+|.| .|++|.++++.|+..|. +++++|...-.. .+. +.+.....+++.+
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 46678999999 79999999999999998 777775431100 011 1111112345555
Q ss_pred Eccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 170 ~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
..++.. +.+.++|+||.+.. ++. .-..+-+.|.+.++.+|+.+..+.+|
T Consensus 97 ~~~i~~~~~~~~~~~~DvVi~~~d---------~~~--------~r~~l~~~~~~~~ip~i~~g~~g~~g 149 (228)
T cd00757 97 NERLDAENAEELIAGYDLVLDCTD---------NFA--------TRYLINDACVKLGKPLVSGAVLGFEG 149 (228)
T ss_pred cceeCHHHHHHHHhCCCEEEEcCC---------CHH--------HHHHHHHHHHHcCCCEEEEEeccCEE
Confidence 555432 34567999999882 221 12245577788888888887766555
No 349
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.32 E-value=0.0031 Score=50.14 Aligned_cols=100 Identities=18% Similarity=0.184 Sum_probs=64.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccc------------------hh----hhhhhcCCCceEEEEcccc
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGR------------------KD----NLVHHFRNPRFELIRHDVV 174 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~------------------~~----~~~~~~~~~~v~~~~~Dv~ 174 (263)
+|+|.| .|++|.++++.|+..|. ++.++|...-.. .+ .+.+.....+++.+..++.
T Consensus 1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 478889 59999999999999998 788887541110 01 1111112334555555544
Q ss_pred c----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 175 E----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 175 ~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
+ ..+.+.|+||.+.. + ......+.+.|++.++.++..++.+.+|
T Consensus 80 ~~~~~~~~~~~diVi~~~d---------~--------~~~~~~l~~~~~~~~i~~i~~~~~g~~g 127 (143)
T cd01483 80 EDNLDDFLDGVDLVIDAID---------N--------IAVRRALNRACKELGIPVIDAGGLGLGG 127 (143)
T ss_pred hhhHHHHhcCCCEEEECCC---------C--------HHHHHHHHHHHHHcCCCEEEEcCCCcEE
Confidence 3 34567999999882 1 2223356678888888899888876555
No 350
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.26 E-value=0.00062 Score=61.80 Aligned_cols=74 Identities=16% Similarity=0.207 Sum_probs=57.7
Q ss_pred EEEEEcCCChHHHHHHHHHHh----CCCeEEEEecCCccchhhhhhhcC-----CCceEEEEcccccc-----ccCCCcE
Q 024766 118 RIVVTGGAGFVGSHLVDKLID----RGDEVIVIDNFFTGRKDNLVHHFR-----NPRFELIRHDVVEP-----ILLEVDQ 183 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~----~G~~V~~l~r~~~~~~~~~~~~~~-----~~~v~~~~~Dv~~~-----~~~~iD~ 183 (263)
.++|.||+||-|+.++++++. .|...-+..|++++..+.+..... .....++.+|..|+ ......+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 589999999999999999999 788888999988877766655431 12333888999776 3456899
Q ss_pred EEEccCCC
Q 024766 184 IYHLACPA 191 (263)
Q Consensus 184 Vi~~Ag~~ 191 (263)
|+||+|+.
T Consensus 87 ivN~vGPy 94 (423)
T KOG2733|consen 87 IVNCVGPY 94 (423)
T ss_pred EEeccccc
Confidence 99999853
No 351
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=97.25 E-value=0.004 Score=57.94 Aligned_cols=110 Identities=12% Similarity=0.082 Sum_probs=75.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-e----EEE----EecCCccchhhhhhhcCC-----CceEEEEccccccccCCCc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD-E----VIV----IDNFFTGRKDNLVHHFRN-----PRFELIRHDVVEPILLEVD 182 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~-~----V~~----l~r~~~~~~~~~~~~~~~-----~~v~~~~~Dv~~~~~~~iD 182 (263)
-+|.|+|++|.+|..++..|+..|. . |.+ ++++.+.......++... ..+.+.. + ....+.+.|
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-~-~y~~~kdaD 122 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-D-PYEVFEDAD 122 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-C-CHHHhCCCC
Confidence 4899999999999999999998865 2 333 366555555444443221 1222222 2 235778999
Q ss_pred EEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcC
Q 024766 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTST 230 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--~iV~vSS 230 (263)
+||..||... ....+-.+.+..|+.-...+....+++. . .+|.+|.
T Consensus 123 IVVitAG~pr--kpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 123 WALLIGAKPR--GPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred EEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 9999998642 2344667889999999999999998854 3 5666664
No 352
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.24 E-value=0.0051 Score=55.31 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=74.2
Q ss_pred EEEEcCCChHHHHHHHHHHhCC--CeEEEEecCCccchhhhhhhcC---C-CceEEEEccccccccCCCcEEEEccCCCC
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFR---N-PRFELIRHDVVEPILLEVDQIYHLACPAS 192 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~---~-~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~ 192 (263)
|.|.| +|.+|..++..|+..| .+++++|++.+.......++.. . ....+...+- ...+.+.|+||.+||...
T Consensus 1 i~iiG-aG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIG-AGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR 78 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence 45788 4889999999999998 5899999876654444333221 1 1223332222 347889999999998542
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
. ...+-.+.+..|+.-...+.+..++.+. .++++|.
T Consensus 79 ~--~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN 116 (300)
T cd00300 79 K--PGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN 116 (300)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 2 2345567788999999999999988864 5666654
No 353
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.20 E-value=0.0027 Score=55.38 Aligned_cols=106 Identities=12% Similarity=0.099 Sum_probs=66.2
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch------------------h----hhhhhcCCCceEE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------D----NLVHHFRNPRFEL 168 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~----~~~~~~~~~~v~~ 168 (263)
..++.++|+|.| .|++|..+++.|+..|. +++++|...-... + .+.++-...+++.
T Consensus 20 ~~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~ 98 (240)
T TIGR02355 20 EALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINP 98 (240)
T ss_pred HHHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 346778999999 79999999999999998 7888775521110 0 0111112233444
Q ss_pred EEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 169 IRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 169 ~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
+...+.+ +.+.+.|+||.+. ++++ .-..+-++|.+.++.+|+.++.+.+|
T Consensus 99 ~~~~i~~~~~~~~~~~~DlVvd~~---------D~~~--------~r~~ln~~~~~~~ip~v~~~~~g~~G 152 (240)
T TIGR02355 99 INAKLDDAELAALIAEHDIVVDCT---------DNVE--------VRNQLNRQCFAAKVPLVSGAAIRMEG 152 (240)
T ss_pred EeccCCHHHHHHHhhcCCEEEEcC---------CCHH--------HHHHHHHHHHHcCCCEEEEEecccEe
Confidence 4433322 2456789999888 2222 22345577888888888877665555
No 354
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.19 E-value=0.0029 Score=55.28 Aligned_cols=106 Identities=13% Similarity=0.086 Sum_probs=66.1
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch----------------------hhhhhhcCCCceEE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK----------------------DNLVHHFRNPRFEL 168 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~v~~ 168 (263)
..++.++|+|.|+ |++|.++++.|+..|. +++++|...-... +.+.+.-...+++.
T Consensus 28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~ 106 (245)
T PRK05690 28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET 106 (245)
T ss_pred HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence 3567889999995 9999999999999998 7888765411110 01111112334555
Q ss_pred EEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 169 IRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 169 ~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
+...+.+ ..+.+.|+||.+.. ++. .-..+-+++.+.++.+|+.++.+.+|
T Consensus 107 ~~~~i~~~~~~~~~~~~DiVi~~~D---------~~~--------~r~~ln~~~~~~~ip~v~~~~~g~~G 160 (245)
T PRK05690 107 INARLDDDELAALIAGHDLVLDCTD---------NVA--------TRNQLNRACFAAKKPLVSGAAIRMEG 160 (245)
T ss_pred EeccCCHHHHHHHHhcCCEEEecCC---------CHH--------HHHHHHHHHHHhCCEEEEeeeccCCc
Confidence 5554443 24567999999871 221 12245567778887888766554444
No 355
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=97.19 E-value=0.0031 Score=56.37 Aligned_cols=106 Identities=15% Similarity=0.218 Sum_probs=71.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch------------------h----hhhhhcCCCceEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------D----NLVHHFRNPRFELI 169 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~----~~~~~~~~~~v~~~ 169 (263)
.++..+|+|.| .|++|.++++.|+..|. ++.++|...-... + .+.+.-...+++.+
T Consensus 16 kL~~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~ 94 (286)
T cd01491 16 KLQKSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS 94 (286)
T ss_pred HHhcCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 35667899999 79999999999999998 6777764421110 1 11111123456666
Q ss_pred EccccccccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 170 RHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 170 ~~Dv~~~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
..++.+..+.+.|+||.+.. ++.... .+-++|.+.++.+|...+.+.+|.
T Consensus 95 ~~~~~~~~l~~fdvVV~~~~---------~~~~~~--------~in~~c~~~~ipfI~a~~~G~~G~ 144 (286)
T cd01491 95 TGPLTTDELLKFQVVVLTDA---------SLEDQL--------KINEFCHSPGIKFISADTRGLFGS 144 (286)
T ss_pred eccCCHHHHhcCCEEEEecC---------CHHHHH--------HHHHHHHHcCCEEEEEeccccEEE
Confidence 66666667788999988761 222222 344677788889999998888774
No 356
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.19 E-value=0.0021 Score=59.64 Aligned_cols=105 Identities=18% Similarity=0.213 Sum_probs=66.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCc------------------cchhhhhhhc----CCCceEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT------------------GRKDNLVHHF----RNPRFELI 169 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~------------------~~~~~~~~~~----~~~~v~~~ 169 (263)
.++.++|+|.| .|++|.++++.|+..|. +++++|+..- .+.+.+.+.+ ...+++.+
T Consensus 132 ~l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 46778999998 69999999999999998 7888887510 1111111111 22334444
Q ss_pred Eccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 170 ~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
...+.+ ..+.+.|+||++.. ++. .-..+-++|.+.++.+|+.+..+.+|
T Consensus 211 ~~~~~~~~~~~~~~~~D~Vv~~~d---------~~~--------~r~~ln~~~~~~~ip~i~~~~~g~~g 263 (376)
T PRK08762 211 QERVTSDNVEALLQDVDVVVDGAD---------NFP--------TRYLLNDACVKLGKPLVYGAVFRFEG 263 (376)
T ss_pred eccCChHHHHHHHhCCCEEEECCC---------CHH--------HHHHHHHHHHHcCCCEEEEEeccCEE
Confidence 443332 24567999999882 221 11235577888888888887765554
No 357
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.18 E-value=0.0041 Score=53.19 Aligned_cols=106 Identities=18% Similarity=0.207 Sum_probs=65.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCC---ccc--------------hhhhh----hhcCCCceEEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFF---TGR--------------KDNLV----HHFRNPRFELIR 170 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~---~~~--------------~~~~~----~~~~~~~v~~~~ 170 (263)
.++.++|+|.| .|++|.++++.|+..|. +++++|... +.. .+.+. +.-...+++.+.
T Consensus 25 ~L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~ 103 (212)
T PRK08644 25 KLKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN 103 (212)
T ss_pred HHhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 46778999999 69999999999999998 688887651 110 01111 111223444444
Q ss_pred ccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCeEEEEcCcceecC
Q 024766 171 HDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GAKFLLTSTSEVYGD 236 (263)
Q Consensus 171 ~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~iV~vSS~~vyg~ 236 (263)
..+.+ ..+.++|+||.+. +++. .-..+.+.+.+. +..+|+.+..+-|+.
T Consensus 104 ~~i~~~~~~~~~~~~DvVI~a~---------D~~~--------~r~~l~~~~~~~~~~p~I~~~~~~~~~~ 157 (212)
T PRK08644 104 EKIDEDNIEELFKDCDIVVEAF---------DNAE--------TKAMLVETVLEHPGKKLVAASGMAGYGD 157 (212)
T ss_pred eecCHHHHHHHHcCCCEEEECC---------CCHH--------HHHHHHHHHHHhCCCCEEEeehhhccCC
Confidence 44443 3456789999886 2221 223455666666 677887766555554
No 358
>PRK08328 hypothetical protein; Provisional
Probab=97.17 E-value=0.0023 Score=55.37 Aligned_cols=106 Identities=21% Similarity=0.244 Sum_probs=66.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccc------------------hh-h----hhhhcCCCceEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGR------------------KD-N----LVHHFRNPRFEL 168 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~------------------~~-~----~~~~~~~~~v~~ 168 (263)
.++.++|+|.| .|++|.++++.|+..|. +++++|...-+. +. . +.+.-....++.
T Consensus 24 ~L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~ 102 (231)
T PRK08328 24 KLKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET 102 (231)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence 46778999999 79999999999999998 788877442110 00 0 011112233444
Q ss_pred EEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 169 IRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 169 ~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
+...+.+ ..+.+.|+||.+.- ++. .-..+-+.|++.++.+|+.++.+.||.
T Consensus 103 ~~~~~~~~~~~~~l~~~D~Vid~~d---------~~~--------~r~~l~~~~~~~~ip~i~g~~~g~~G~ 157 (231)
T PRK08328 103 FVGRLSEENIDEVLKGVDVIVDCLD---------NFE--------TRYLLDDYAHKKGIPLVHGAVEGTYGQ 157 (231)
T ss_pred EeccCCHHHHHHHHhcCCEEEECCC---------CHH--------HHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence 4433332 24567899988871 221 112344677888888998888777774
No 359
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.17 E-value=0.0015 Score=52.35 Aligned_cols=76 Identities=14% Similarity=0.225 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS 192 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~ 192 (263)
.++++++|+|+ |.+|..+++.|.+.| .+|++.+|+.+...+...+. ....+.....|. ++...++|+||++.....
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~Dvvi~~~~~~~ 93 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERF-GELGIAIAYLDL-EELLAEADLIINTTPVGM 93 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH-hhcccceeecch-hhccccCCEEEeCcCCCC
Confidence 55789999996 999999999999996 68999988755443332222 111111111222 223678999999986543
No 360
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.16 E-value=0.0021 Score=54.57 Aligned_cols=76 Identities=21% Similarity=0.338 Sum_probs=55.2
Q ss_pred CccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 109 ~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
|....+++|+++|.|| |-+|...++.|++.|++|+++.+... +.+........+.+...+.....+.+.|+||-+.
T Consensus 3 Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~---~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT 78 (202)
T PRK06718 3 PLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELT---ENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAAT 78 (202)
T ss_pred ceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC---HHHHHHHhCCCEEEEecCCChhhcCCceEEEEcC
Confidence 5566789999999995 99999999999999999999875322 2222222334455655555556677889888876
No 361
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.14 E-value=0.003 Score=58.23 Aligned_cols=106 Identities=17% Similarity=0.082 Sum_probs=68.0
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch------------------h----hhhhhcCCCceEE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------D----NLVHHFRNPRFEL 168 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~----~~~~~~~~~~v~~ 168 (263)
..++.++|+|.| .|++|.++++.|+..|. +++++|...-... + .+.+.-...+++.
T Consensus 24 ~~L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~ 102 (355)
T PRK05597 24 QSLFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV 102 (355)
T ss_pred HHHhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence 346778999999 69999999999999998 7888876521110 1 1111112334555
Q ss_pred EEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 169 IRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 169 ~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
+...+.. ..+.+.|+||.+.. ++ ..-..+-++|.+.++.+|+.++.+.+|
T Consensus 103 ~~~~i~~~~~~~~~~~~DvVvd~~d---------~~--------~~r~~~n~~c~~~~ip~v~~~~~g~~g 156 (355)
T PRK05597 103 SVRRLTWSNALDELRDADVILDGSD---------NF--------DTRHLASWAAARLGIPHVWASILGFDA 156 (355)
T ss_pred EEeecCHHHHHHHHhCCCEEEECCC---------CH--------HHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence 5555543 34568999999881 22 112234567778888888887766555
No 362
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=97.14 E-value=0.0067 Score=54.74 Aligned_cols=109 Identities=13% Similarity=0.124 Sum_probs=73.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcC-----CCceEEE-EccccccccCCCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR-----NPRFELI-RHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~-----~~~v~~~-~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
++|.|.|+ |.+|..++..|+..|. +|++++...+.......+... .....+. ..|.. .+.+.|+||-+||
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~--~~~~aDiVIitag 78 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYA--DTANSDIVVITAG 78 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHH--HhCCCCEEEEcCC
Confidence 47899995 9999999999999886 899999865433322221111 1111221 23443 2678999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
... ....+-.+.+..|..-...+++...+.+. .+|++|.
T Consensus 79 ~p~--~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 79 LPR--KPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred CCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 532 22334556788999999999998877754 5666665
No 363
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.13 E-value=0.0012 Score=55.97 Aligned_cols=72 Identities=21% Similarity=0.184 Sum_probs=47.4
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccC
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
+..+++|+++|+|. |.+|+.+++.|.+.|++|++.+++.+...+... .+ ....+ |..+....++|+++.+|.
T Consensus 23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~-~~---g~~~v--~~~~l~~~~~Dv~vp~A~ 94 (200)
T cd01075 23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAE-LF---GATVV--APEEIYSVDADVFAPCAL 94 (200)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-Hc---CCEEE--cchhhccccCCEEEeccc
Confidence 34578899999995 799999999999999999998876443222211 11 12222 221222236888888774
No 364
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=97.09 E-value=0.0039 Score=52.69 Aligned_cols=106 Identities=17% Similarity=0.290 Sum_probs=66.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch----------------------hhhhhhcCCCceEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK----------------------DNLVHHFRNPRFELI 169 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~v~~~ 169 (263)
.++.++|+|.| .|++|.++++.|+..|. ++.++|...-... +.+.+.-....++..
T Consensus 18 ~L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~ 96 (197)
T cd01492 18 RLRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD 96 (197)
T ss_pred HHHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 45677999998 56699999999999998 6888775421110 001111122344444
Q ss_pred Eccccc---cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 170 RHDVVE---PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 170 ~~Dv~~---~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
...+.+ ..+.+.|+||.+.. +... -..+-+.|.+.+..+|+.++.+.||.
T Consensus 97 ~~~~~~~~~~~~~~~dvVi~~~~---------~~~~--------~~~ln~~c~~~~ip~i~~~~~G~~G~ 149 (197)
T cd01492 97 TDDISEKPEEFFSQFDVVVATEL---------SRAE--------LVKINELCRKLGVKFYATGVHGLFGF 149 (197)
T ss_pred ecCccccHHHHHhCCCEEEECCC---------CHHH--------HHHHHHHHHHcCCCEEEEEecCCEEE
Confidence 443332 34567999997762 1211 22344678888888999888877773
No 365
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.06 E-value=0.0064 Score=51.39 Aligned_cols=106 Identities=17% Similarity=0.277 Sum_probs=66.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch------------h------------hhhhhcCCCceE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------D------------NLVHHFRNPRFE 167 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------~------------~~~~~~~~~~v~ 167 (263)
.++..+|+|.| .|++|.++++.|+..|. +++++|...-... + .+.+.-...+++
T Consensus 16 ~L~~s~VlviG-~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~ 94 (198)
T cd01485 16 KLRSAKVLIIG-AGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS 94 (198)
T ss_pred HHhhCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence 35667899999 56699999999999998 6888875411100 0 011111223445
Q ss_pred EEEcccc------ccccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 168 LIRHDVV------EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 168 ~~~~Dv~------~~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
.+..++. +..+.+.|+||.+.. +.. ....+-+.|++.+..+|..++.+.||.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~dvVi~~~d---------~~~--------~~~~ln~~c~~~~ip~i~~~~~G~~G~ 152 (198)
T cd01485 95 IVEEDSLSNDSNIEEYLQKFTLVIATEE---------NYE--------RTAKVNDVCRKHHIPFISCATYGLIGY 152 (198)
T ss_pred EEecccccchhhHHHHHhCCCEEEECCC---------CHH--------HHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence 5544442 224567899887651 121 122345778888889999988888773
No 366
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.05 E-value=0.0029 Score=53.77 Aligned_cols=77 Identities=17% Similarity=0.113 Sum_probs=58.9
Q ss_pred CccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 109 ~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
|....+++++++|.| +|-+|..-++.|++.|++|++++.... +.+.......++.++..+.....+.+.|.||-+.
T Consensus 2 P~~l~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~---~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at 77 (205)
T TIGR01470 2 PVFANLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELE---SELTLLAEQGGITWLARCFDADILEGAFLVIAAT 77 (205)
T ss_pred CeEEEcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECC
Confidence 445568899999999 699999999999999999999976433 2222333344788888887777778888888766
Q ss_pred C
Q 024766 189 C 189 (263)
Q Consensus 189 g 189 (263)
+
T Consensus 78 ~ 78 (205)
T TIGR01470 78 D 78 (205)
T ss_pred C
Confidence 3
No 367
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.03 E-value=0.0058 Score=56.02 Aligned_cols=98 Identities=15% Similarity=0.214 Sum_probs=59.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecCCccchhhhhhhcCC-C---ceEEEEccccccccCCCcEEEEccCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRN-P---RFELIRHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~-~---~v~~~~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
+++|.|.||||++|+++++.|.+. +.+++++.++.. ..+.+.+.... . ...+...| +....++|+||-|...
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~--~~~~~~vD~Vf~alP~ 78 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSS-AGKPLSDVHPHLRGLVDLVLEPLD--PEILAGADVVFLALPH 78 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccc-cCcchHHhCcccccccCceeecCC--HHHhcCCCEEEECCCc
Confidence 468999999999999999999987 568777665322 11112111110 0 11122222 2244679999998731
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCccee
Q 024766 191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY 234 (263)
Q Consensus 191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vy 234 (263)
.....++..+.+.|+++|=.|+..=+
T Consensus 79 ------------------~~~~~~v~~a~~aG~~VID~S~~fR~ 104 (343)
T PRK00436 79 ------------------GVSMDLAPQLLEAGVKVIDLSADFRL 104 (343)
T ss_pred ------------------HHHHHHHHHHHhCCCEEEECCcccCC
Confidence 01234556666778888888876444
No 368
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.03 E-value=0.0035 Score=48.86 Aligned_cols=96 Identities=18% Similarity=0.286 Sum_probs=57.0
Q ss_pred EEEEEcCCChHHHHHHHHHHh-CCCeEEE-EecCCcc-chhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCCCCC
Q 024766 118 RIVVTGGAGFVGSHLVDKLID-RGDEVIV-IDNFFTG-RKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPV 194 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~-~G~~V~~-l~r~~~~-~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~~~ 194 (263)
+|+|.|++|-+|+.+++.+.+ .+.++.. +++..+. ..+...+..+.........|-.+..+.++|+||.+.-
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT~----- 76 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFTN----- 76 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES------
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcCC-----
Confidence 799999999999999999999 5667654 4554422 2222333322222222223444556666999998871
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCc
Q 024766 195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS 231 (263)
Q Consensus 195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~ 231 (263)
+ ..+...++.+.++++.+|.-+|.
T Consensus 77 -----p--------~~~~~~~~~~~~~g~~~ViGTTG 100 (124)
T PF01113_consen 77 -----P--------DAVYDNLEYALKHGVPLVIGTTG 100 (124)
T ss_dssp -----H--------HHHHHHHHHHHHHT-EEEEE-SS
T ss_pred -----h--------HHhHHHHHHHHhCCCCEEEECCC
Confidence 1 23445777788887777765554
No 369
>PRK04148 hypothetical protein; Provisional
Probab=97.02 E-value=0.0061 Score=48.25 Aligned_cols=89 Identities=25% Similarity=0.349 Sum_probs=64.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccccc---CCCcEEEEccCCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL---LEVDQIYHLACPA 191 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~---~~iD~Vi~~Ag~~ 191 (263)
+++++++.| +| -|.+++..|.+.|++|+++|.++...+.. ....+.++..|++++.+ .+.|.|+-.=.
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-----~~~~~~~v~dDlf~p~~~~y~~a~liysirp-- 86 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-----KKLGLNAFVDDLFNPNLEIYKNAKLIYSIRP-- 86 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHhCCeEEECcCCCCCHHHHhcCCEEEEeCC--
Confidence 456899999 56 78889999999999999999876643222 22357899999998754 57888876541
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL 227 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~ 227 (263)
+.+. ...+++.|++.++.+++
T Consensus 87 --------p~el-------~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 87 --------PRDL-------QPFILELAKKINVPLII 107 (134)
T ss_pred --------CHHH-------HHHHHHHHHHcCCCEEE
Confidence 1121 23588999999885443
No 370
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.01 E-value=0.0056 Score=53.07 Aligned_cols=108 Identities=14% Similarity=0.121 Sum_probs=65.0
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccc------------------hhh----hhhhcCCCceEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGR------------------KDN----LVHHFRNPRFELI 169 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~------------------~~~----~~~~~~~~~v~~~ 169 (263)
.++.++|+|.| .|++|+++++.|++.|. +++++|...-.. .+. +.++-...+++.+
T Consensus 8 ~L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~ 86 (231)
T cd00755 8 KLRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV 86 (231)
T ss_pred HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence 35677899999 79999999999999998 888877541110 000 1111122344444
Q ss_pred Eccccc----ccc-CCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCC
Q 024766 170 RHDVVE----PIL-LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL 238 (263)
Q Consensus 170 ~~Dv~~----~~~-~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~ 238 (263)
...+.. ..+ .++|+||.+.. +. ..-..+.+.|.+.+..+|...+.+-..++.
T Consensus 87 ~~~i~~~~~~~l~~~~~D~VvdaiD---------~~--------~~k~~L~~~c~~~~ip~I~s~g~g~~~dp~ 143 (231)
T cd00755 87 EEFLTPDNSEDLLGGDPDFVVDAID---------SI--------RAKVALIAYCRKRKIPVISSMGAGGKLDPT 143 (231)
T ss_pred eeecCHhHHHHHhcCCCCEEEEcCC---------CH--------HHHHHHHHHHHHhCCCEEEEeCCcCCCCCC
Confidence 444332 222 35899999871 22 122346678888877777766655444443
No 371
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.96 E-value=0.005 Score=55.67 Aligned_cols=101 Identities=16% Similarity=0.252 Sum_probs=64.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch------------------hh----hhhhcCCCceEEEEcccc
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------DN----LVHHFRNPRFELIRHDVV 174 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~~----~~~~~~~~~v~~~~~Dv~ 174 (263)
+|+|.| .|++|.++++.|+..|. ++.++|...-... +. +.+.-...+++.+..++.
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 478989 69999999999999998 7888775421111 00 111112335556666665
Q ss_pred c-----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 175 E-----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 175 ~-----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
+ ..+.+.|+||.+. ++. ..-..+-+.|...++.+|...+.+.+|.
T Consensus 80 ~~~~~~~f~~~~DvVv~a~---------Dn~--------~ar~~in~~c~~~~ip~I~~gt~G~~G~ 129 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNAL---------DNL--------AARRHVNKMCLAADVPLIESGTTGFLGQ 129 (312)
T ss_pred CccchHHHHhcCCEEEECC---------CCH--------HHHHHHHHHHHHCCCCEEEEecCcceeE
Confidence 4 3456799999887 122 2223345667777778888888777663
No 372
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.96 E-value=0.0078 Score=57.00 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=73.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC---CC----eEEEEecC--CccchhhhhhhcC-----CCceEEEEccccccccCCCc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDR---GD----EVIVIDNF--FTGRKDNLVHHFR-----NPRFELIRHDVVEPILLEVD 182 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~---G~----~V~~l~r~--~~~~~~~~~~~~~-----~~~v~~~~~Dv~~~~~~~iD 182 (263)
-+|+||||+|.||.+|+-.++.- |. .+++++.. .+.......++.. ...+.+. +-....+.+.|
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~~~~ea~~daD 201 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--TDLDVAFKDAH 201 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--ECCHHHhCCCC
Confidence 48999999999999999999973 42 34555652 3333333332221 1123333 22346788999
Q ss_pred EEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEcC
Q 024766 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA---KFLLTST 230 (263)
Q Consensus 183 ~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~---~iV~vSS 230 (263)
+||-.||.. .....+-.+.++.|..-...+.++..+.+. +|+.+.|
T Consensus 202 vvIitag~p--rk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 202 VIVLLDDFL--IKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred EEEECCCCC--CCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 999999853 223345677889999999999999887763 6666654
No 373
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.95 E-value=0.0028 Score=56.59 Aligned_cols=74 Identities=18% Similarity=0.123 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcC-CCceEEEEccccccccCCCcEEEEcc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
.++++++|.| +|+.|++++..|++.|. +|++++|+.++.++...+... ...+.+...+-....+.+.|+|||+.
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaT 200 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHAT 200 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECC
Confidence 5678999999 68899999999999998 799998876544433322211 12233333332233456799999994
No 374
>PRK08223 hypothetical protein; Validated
Probab=96.95 E-value=0.0054 Score=54.75 Aligned_cols=107 Identities=13% Similarity=0.024 Sum_probs=65.6
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch------------------h----hhhhhcCCCceEE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------D----NLVHHFRNPRFEL 168 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~----~~~~~~~~~~v~~ 168 (263)
..++..+|+|.| .|++|..+++.|+..|. ++.++|...-... + .+.++-...+++.
T Consensus 23 ~kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~ 101 (287)
T PRK08223 23 QRLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRA 101 (287)
T ss_pred HHHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEE
Confidence 346778999999 79999999999999998 7777765411110 0 0111112234555
Q ss_pred EEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCccee
Q 024766 169 IRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY 234 (263)
Q Consensus 169 ~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vy 234 (263)
+...+.+ +.+.+.|+||.+. +++ ++..-..+-++|.+.++.+|+.+..+..
T Consensus 102 ~~~~l~~~n~~~ll~~~DlVvD~~---------D~~------~~~~r~~ln~~c~~~~iP~V~~~~~g~~ 156 (287)
T PRK08223 102 FPEGIGKENADAFLDGVDVYVDGL---------DFF------EFDARRLVFAACQQRGIPALTAAPLGMG 156 (287)
T ss_pred EecccCccCHHHHHhCCCEEEECC---------CCC------cHHHHHHHHHHHHHcCCCEEEEeccCCe
Confidence 5544443 3456799998666 111 1112234567788888888887664433
No 375
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.95 E-value=0.0061 Score=58.17 Aligned_cols=77 Identities=21% Similarity=0.189 Sum_probs=53.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
.+++++|+|.| .|++|.++++.|.++|++|+++++..........+.+....+.+...+... ...++|.||...|+.
T Consensus 13 ~~~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 13 DWQGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSPGWR 89 (480)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECCCcC
Confidence 35678999999 599999999999999999999986543322222222233345555444332 345689999998864
No 376
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.92 E-value=0.005 Score=57.52 Aligned_cols=106 Identities=17% Similarity=0.126 Sum_probs=67.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch------------------hh----hhhhcCCCceEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------DN----LVHHFRNPRFELI 169 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~~----~~~~~~~~~v~~~ 169 (263)
.++..+|+|.| .|++|.++++.|+..|. ++.++|...-... +. +.+.-...+++.+
T Consensus 39 ~L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~ 117 (392)
T PRK07878 39 RLKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH 117 (392)
T ss_pred HHhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence 45777999999 79999999999999998 7777765411100 00 1111112344445
Q ss_pred Eccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 170 ~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
...+.. ..+.+.|+||.+. +++ ..-..+-++|.+.++.+|+.+..+.+|.
T Consensus 118 ~~~i~~~~~~~~~~~~D~Vvd~~---------d~~--------~~r~~ln~~~~~~~~p~v~~~~~g~~G~ 171 (392)
T PRK07878 118 EFRLDPSNAVELFSQYDLILDGT---------DNF--------ATRYLVNDAAVLAGKPYVWGSIYRFEGQ 171 (392)
T ss_pred eccCChhHHHHHHhcCCEEEECC---------CCH--------HHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence 544443 3456789999877 122 1222355677788888998888777774
No 377
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.92 E-value=0.0076 Score=55.13 Aligned_cols=94 Identities=20% Similarity=0.216 Sum_probs=57.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS 192 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~ 192 (263)
+.+|.|+||||++|.+|++.|.++++ ++..+... +...+.+. +....+.+...|. ..+.++|++|-+++..
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~--~~~~~l~~~~~~~--~~~~~vD~vFla~p~~- 77 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVP--FAGKNLRVREVDS--FDFSQVQLAFFAAGAA- 77 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeec--cCCcceEEeeCCh--HHhcCCCEEEEcCCHH-
Confidence 36899999999999999999998766 33344322 21111111 1222333333332 2357899999988410
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcc
Q 024766 193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE 232 (263)
Q Consensus 193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~ 232 (263)
-...++..+.+.|+++|=.|+..
T Consensus 78 -----------------~s~~~v~~~~~~G~~VIDlS~~f 100 (336)
T PRK05671 78 -----------------VSRSFAEKARAAGCSVIDLSGAL 100 (336)
T ss_pred -----------------HHHHHHHHHHHCCCeEEECchhh
Confidence 01236677777787877777764
No 378
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=96.92 E-value=0.0025 Score=54.73 Aligned_cols=112 Identities=15% Similarity=0.131 Sum_probs=78.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhc-CCCceEEEEccccccccCCCcEEEEccCCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPILLEVDQIYHLACPAS 192 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~ 192 (263)
.+-...++.|+.||.|.++++.-...+.+|-.+.+++.+.-....... ..........|..+....++..++-++|-..
T Consensus 50 ve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfg 129 (283)
T KOG4288|consen 50 VEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFG 129 (283)
T ss_pred hhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCcc
Confidence 333468899999999999999999999999999887553322211110 1123444555555666667777777775322
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCc
Q 024766 193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTS 231 (263)
Q Consensus 193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~iV~vSS~ 231 (263)
+...+..+|-....+-.+++++.|+ +|++||-.
T Consensus 130 ------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~ 163 (283)
T KOG4288|consen 130 ------NIILMDRINGTANINAVKAAAKAGVPRFVYISAH 163 (283)
T ss_pred ------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhh
Confidence 3445557787777788899999997 99999874
No 379
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.90 E-value=0.0029 Score=56.40 Aligned_cols=76 Identities=17% Similarity=0.033 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCC-CceEEEEc-cccccccCCCcEEEEccCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRN-PRFELIRH-DVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~-~~v~~~~~-Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
+++++++|.| +|+.|++++..|++.|. +|+++.|+.++.++ +.+.+.. ..+..+.. +-....+.+.|+|||+...
T Consensus 123 ~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~-La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~ 200 (282)
T TIGR01809 123 LAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSR-LVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPA 200 (282)
T ss_pred cCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH-HHHHhhhcCcceeccchhhhhhcccCCCEEEECCCC
Confidence 5688999999 69999999999999997 78888887554433 3322221 12211111 1112344679999999865
Q ss_pred C
Q 024766 191 A 191 (263)
Q Consensus 191 ~ 191 (263)
.
T Consensus 201 g 201 (282)
T TIGR01809 201 D 201 (282)
T ss_pred C
Confidence 3
No 380
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=96.90 E-value=0.0027 Score=61.58 Aligned_cols=74 Identities=15% Similarity=0.131 Sum_probs=48.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcc-ccccccCCCcEEEEccCCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHD-VVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~D-v~~~~~~~iD~Vi~~Ag~~ 191 (263)
.+++|+++|+|+ |++|++++..|++.|++|++++|+.++..+ +.+.+.. ..+..+ ..+......|+|||+..+.
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~-la~~l~~---~~~~~~~~~~~~~~~~diiINtT~vG 450 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKE-LADAVGG---QALTLADLENFHPEEGMILANTTSVG 450 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHhCC---ceeeHhHhhhhccccCeEEEecccCC
Confidence 467889999997 899999999999999999988886443332 2222221 112222 1111223578899887654
No 381
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.90 E-value=0.0038 Score=55.76 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=33.6
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN 148 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r 148 (263)
..++||+++|.|++|.+|+.++..|+++|+.|+++.+
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~ 191 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS 191 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 4579999999999889999999999999999888876
No 382
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.85 E-value=0.017 Score=51.90 Aligned_cols=107 Identities=14% Similarity=0.080 Sum_probs=70.3
Q ss_pred EEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhc-----CCCceEEEE-ccccccccCCCcEEEEccCCC
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHF-----RNPRFELIR-HDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~-----~~~~v~~~~-~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
|.|+|+ |.+|..++..|+..|. +|+++|++++.......+.. ......+.. .| ...+.+.|+||.++|..
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d--~~~l~dADiVIit~g~p 77 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTND--YEDIAGSDVVVITAGIP 77 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCC--HHHhCCCCEEEEecCCC
Confidence 468896 9999999999998876 99999998654322221111 111222222 34 23578899999999854
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
.. ...+-.+.+..|+.-...+++.+.+... .+|++|.
T Consensus 78 ~~--~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sN 116 (300)
T cd01339 78 RK--PGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTN 116 (300)
T ss_pred CC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 32 2344456777888888888888877764 4455553
No 383
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.83 E-value=0.0025 Score=56.98 Aligned_cols=70 Identities=14% Similarity=0.127 Sum_probs=49.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
.+.+++++|+| .|.+|+.+++.|...|.+|++.+|+.+.... ..+ .....+..+-.+..+.+.|+||++.
T Consensus 148 ~l~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~-~~~----~g~~~~~~~~l~~~l~~aDiVint~ 217 (287)
T TIGR02853 148 TIHGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLAR-ITE----MGLIPFPLNKLEEKVAEIDIVINTI 217 (287)
T ss_pred CCCCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH----CCCeeecHHHHHHHhccCCEEEECC
Confidence 56889999999 5889999999999999999999886543221 111 1122333333344567899999987
No 384
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=96.83 E-value=0.017 Score=51.95 Aligned_cols=105 Identities=18% Similarity=0.163 Sum_probs=73.5
Q ss_pred EEcCCChHHHHHHHHHHhCCC--eEEEEecCCccchhhhhhhcC-----CCceEEEEccccccccCCCcEEEEccCCCCC
Q 024766 121 VTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFR-----NPRFELIRHDVVEPILLEVDQIYHLACPASP 193 (263)
Q Consensus 121 VTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~-----~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~~ 193 (263)
|.| +|.||..++..|+..+. ++.++|+..+.......++.. ...+.+...| -+.+.+.|+||-.||..-.
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~--~~~~~daDivVitag~~rk 77 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGD--YSDCKDADLVVITAGAPQK 77 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCC--HHHHCCCCEEEECCCCCCC
Confidence 356 59999999999998875 799999876655544443321 1233333222 3577889999999986432
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
...+-.+.++.|..-...+.+.+++++. .++.+|.
T Consensus 78 --~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 114 (299)
T TIGR01771 78 --PGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN 114 (299)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 2345567889999999999999888764 5666664
No 385
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.83 E-value=0.013 Score=53.84 Aligned_cols=96 Identities=17% Similarity=0.256 Sum_probs=56.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcC--------C--CceEEEEccccccccCCCcEE
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR--------N--PRFELIRHDVVEPILLEVDQI 184 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~--------~--~~v~~~~~Dv~~~~~~~iD~V 184 (263)
+.+|.|+||+|++|++|++.|.+... ++..+.++............. . ..+.+...|. ..+.++|+|
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~DvV 80 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDP--EAVDDVDIV 80 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCH--HHhcCCCEE
Confidence 46899999999999999999998765 787774443322222221110 0 1111111121 223579999
Q ss_pred EEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCc
Q 024766 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS 231 (263)
Q Consensus 185 i~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~ 231 (263)
+-+.+. ++ ...+.+.+.+.|+++|-.|+.
T Consensus 81 f~a~p~----------------~~--s~~~~~~~~~~G~~vIDls~~ 109 (349)
T PRK08664 81 FSALPS----------------DV--AGEVEEEFAKAGKPVFSNASA 109 (349)
T ss_pred EEeCCh----------------hH--HHHHHHHHHHCCCEEEECCch
Confidence 887631 11 123446677778877666664
No 386
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.83 E-value=0.0073 Score=55.97 Aligned_cols=106 Identities=18% Similarity=0.203 Sum_probs=67.1
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch------------------hh----hhhhcCCCceEE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------DN----LVHHFRNPRFEL 168 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~~----~~~~~~~~~v~~ 168 (263)
..++.++|+|.| .|++|.++++.|+..|. +++++|...-... +. +.+.....+++.
T Consensus 37 ~~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 115 (370)
T PRK05600 37 ERLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA 115 (370)
T ss_pred HHhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence 346778999999 79999999999999998 8888876511100 00 111112234555
Q ss_pred EEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 169 IRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 169 ~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
+...+.. +.+.++|+||.|. ++. ..-..+-+.|.+.++.+|+.+..+-+|
T Consensus 116 ~~~~i~~~~~~~~~~~~DlVid~~---------Dn~--------~~r~~in~~~~~~~iP~v~~~~~g~~G 169 (370)
T PRK05600 116 LRERLTAENAVELLNGVDLVLDGS---------DSF--------ATKFLVADAAEITGTPLVWGTVLRFHG 169 (370)
T ss_pred eeeecCHHHHHHHHhCCCEEEECC---------CCH--------HHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence 5544443 3567799999988 222 222244566777777788777655555
No 387
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.82 E-value=0.0086 Score=55.01 Aligned_cols=97 Identities=13% Similarity=0.173 Sum_probs=58.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC-CCeEEEE-ecCCccchhhhhhhcC---CC-ceEEEEccccccccCCCcEEEEccCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDR-GDEVIVI-DNFFTGRKDNLVHHFR---NP-RFELIRHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l-~r~~~~~~~~~~~~~~---~~-~v~~~~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
++|.|.||||++|.++++.|.+. +.+++.+ +++.. ..+.+..... .. ...+...|.. ....++|+||-|.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~s-agk~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~DvVf~alP~ 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRES-AGKPVSEVHPHLRGLVDLNLEPIDEE-EIAEDADVVFLALPH 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchh-cCCChHHhCccccccCCceeecCCHH-HhhcCCCEEEECCCc
Confidence 47999999999999999999987 4577744 43321 1111221111 11 1122222321 222479999998842
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcce
Q 024766 191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233 (263)
Q Consensus 191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~v 233 (263)
. ....++..+.+.|+++|=.|+..=
T Consensus 79 ~------------------~s~~~~~~~~~~G~~VIDlS~~fR 103 (346)
T TIGR01850 79 G------------------VSAELAPELLAAGVKVIDLSADFR 103 (346)
T ss_pred h------------------HHHHHHHHHHhCCCEEEeCChhhh
Confidence 1 234566666677888998888643
No 388
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=96.79 E-value=0.0027 Score=57.27 Aligned_cols=74 Identities=12% Similarity=0.205 Sum_probs=53.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcc---ccccccCCCcEEEEccCCCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHD---VVEPILLEVDQIYHLACPAS 192 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~D---v~~~~~~~iD~Vi~~Ag~~~ 192 (263)
..++|-||+||.|.-++++|+.+|..-.+..|+..+........ ..++..+.++ ..+......++|+||+|+..
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L--G~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL--GPEAAVFPLGVPAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc--CccccccCCCCHHHHHHHHhcceEEEecccccc
Confidence 37899999999999999999999988877777655544332222 3333344433 55667788999999999754
No 389
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.77 E-value=0.01 Score=51.51 Aligned_cols=100 Identities=17% Similarity=0.198 Sum_probs=62.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch------------------hh----hhhhcCCCceEEEEcccc
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------DN----LVHHFRNPRFELIRHDVV 174 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~~----~~~~~~~~~v~~~~~Dv~ 174 (263)
+|+|.| .|++|.++++.|+..|. ++.++|...-... +. +.+.....++..+..++.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 478888 79999999999999998 7888775411110 00 111112234555555552
Q ss_pred ------ccccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 175 ------EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 175 ------~~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
+..+.++|+||.+. .|+..-..+-+.+...++.+|..++.+.+|
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~-----------------Dn~~aR~~ln~~c~~~~iplI~~g~~G~~G 129 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNAL-----------------DNIIARRYVNGMLIFLIVPLIESGTEGFKG 129 (234)
T ss_pred hhhhchHHHHhCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence 23456799999876 122333345566777777888877766665
No 390
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.76 E-value=0.013 Score=51.84 Aligned_cols=108 Identities=18% Similarity=0.174 Sum_probs=64.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccc----------hh--------hhhhhc--CCCc--eEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGR----------KD--------NLVHHF--RNPR--FELI 169 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~----------~~--------~~~~~~--~~~~--v~~~ 169 (263)
.++.++|+|.| .|++|.++++.|++.|. +++++|...-.. .+ .+.+.+ -++. +..+
T Consensus 27 kL~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i 105 (268)
T PRK15116 27 LFADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV 105 (268)
T ss_pred HhcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence 46778999999 79999999999999995 888887541110 00 111111 1223 3333
Q ss_pred Ecccc----cccc-CCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCC
Q 024766 170 RHDVV----EPIL-LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL 238 (263)
Q Consensus 170 ~~Dv~----~~~~-~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~ 238 (263)
..-+. +..+ .+.|+||.+.. + +..-..+.+.|.+.+..+|.+..++..-+|.
T Consensus 106 ~~~i~~e~~~~ll~~~~D~VIdaiD---------~--------~~~k~~L~~~c~~~~ip~I~~gGag~k~dp~ 162 (268)
T PRK15116 106 DDFITPDNVAEYMSAGFSYVIDAID---------S--------VRPKAALIAYCRRNKIPLVTTGGAGGQIDPT 162 (268)
T ss_pred ecccChhhHHHHhcCCCCEEEEcCC---------C--------HHHHHHHHHHHHHcCCCEEEECCcccCCCCC
Confidence 22111 1223 36899998872 1 1122246778888877888776666555554
No 391
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.72 E-value=0.014 Score=48.34 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=60.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCC---ccc--------------hhhhh----hhcCCCceEEEEccccc
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFF---TGR--------------KDNLV----HHFRNPRFELIRHDVVE 175 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~---~~~--------------~~~~~----~~~~~~~v~~~~~Dv~~ 175 (263)
+|+|.| .|++|.++++.|+..|. +++++|... +.. .+.+. +.-...+++.+...+..
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 478889 69999999999999998 699888763 110 01111 11122344444444433
Q ss_pred ----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCeEEEEcCcceecC
Q 024766 176 ----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GAKFLLTSTSEVYGD 236 (263)
Q Consensus 176 ----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~iV~vSS~~vyg~ 236 (263)
..+.+.|+||.+. +++ ..-..+.+.+.+. ++.+|+-+..+-||.
T Consensus 80 ~~~~~~l~~~DlVi~~~---------d~~--------~~r~~i~~~~~~~~~ip~i~~~~~~~~~~ 128 (174)
T cd01487 80 NNLEGLFGDCDIVVEAF---------DNA--------ETKAMLAESLLGNKNKPVVCASGMAGFGD 128 (174)
T ss_pred hhHHHHhcCCCEEEECC---------CCH--------HHHHHHHHHHHHHCCCCEEEEehhhccCC
Confidence 3466799999986 122 1122355666555 667777655555553
No 392
>PRK07411 hypothetical protein; Validated
Probab=96.68 E-value=0.0097 Score=55.55 Aligned_cols=107 Identities=14% Similarity=0.078 Sum_probs=68.1
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch----------------------hhhhhhcCCCceEE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK----------------------DNLVHHFRNPRFEL 168 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~v~~ 168 (263)
..++..+|+|.| .|++|.++++.|+..|. +++++|...-... +.+.+.-...+++.
T Consensus 34 ~~L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~ 112 (390)
T PRK07411 34 KRLKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL 112 (390)
T ss_pred HHHhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence 356778999999 79999999999999998 7777765411110 01111112335555
Q ss_pred EEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 169 IRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 169 ~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
+...+.. ..+.+.|+||.|.. ++. .-..+-++|.+.++.+|+.+..+-||.
T Consensus 113 ~~~~~~~~~~~~~~~~~D~Vvd~~d---------~~~--------~r~~ln~~~~~~~~p~v~~~~~g~~g~ 167 (390)
T PRK07411 113 YETRLSSENALDILAPYDVVVDGTD---------NFP--------TRYLVNDACVLLNKPNVYGSIFRFEGQ 167 (390)
T ss_pred EecccCHHhHHHHHhCCCEEEECCC---------CHH--------HHHHHHHHHHHcCCCEEEEEEccCEEE
Confidence 5555544 24567999999882 222 112344667777778888777666663
No 393
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.67 E-value=0.011 Score=54.16 Aligned_cols=95 Identities=16% Similarity=0.137 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
...+|.|.||||++|.+|++.|.++++ ++..+..... ..+.... .. .++...++..+.+.++|+||.+++..
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rs-aGk~~~~--~~--~~~~v~~~~~~~~~~~D~vf~a~p~~ 80 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARS-AGKKVTF--EG--RDYTVEELTEDSFDGVDIALFSAGGS 80 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCC-CCCeeee--cC--ceeEEEeCCHHHHcCCCEEEECCCcH
Confidence 345899999999999999999999876 3333322211 1111111 11 22333344444557899999888521
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcc
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE 232 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~ 232 (263)
....+...+.+.|+++|=.|+..
T Consensus 81 ------------------~s~~~~~~~~~~g~~VIDlS~~f 103 (344)
T PLN02383 81 ------------------ISKKFGPIAVDKGAVVVDNSSAF 103 (344)
T ss_pred ------------------HHHHHHHHHHhCCCEEEECCchh
Confidence 11234445556677888777764
No 394
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.66 E-value=0.0091 Score=48.59 Aligned_cols=74 Identities=16% Similarity=0.216 Sum_probs=52.9
Q ss_pred CCccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEc
Q 024766 108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHL 187 (263)
Q Consensus 108 ~~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~ 187 (263)
.|...++++++|+|.| +|-+|...++.|++.|++|++++. + ..+.+.+. ..+.+...+..+..+.+.|+||-+
T Consensus 5 ~P~~l~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp--~-~~~~l~~l---~~i~~~~~~~~~~dl~~a~lViaa 77 (157)
T PRK06719 5 YPLMFNLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP--E-ICKEMKEL---PYITWKQKTFSNDDIKDAHLIYAA 77 (157)
T ss_pred cceEEEcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC--c-cCHHHHhc---cCcEEEecccChhcCCCceEEEEC
Confidence 5677789999999999 699999999999999999999852 2 22222221 234444444455566778888876
Q ss_pred c
Q 024766 188 A 188 (263)
Q Consensus 188 A 188 (263)
.
T Consensus 78 T 78 (157)
T PRK06719 78 T 78 (157)
T ss_pred C
Confidence 6
No 395
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.66 E-value=0.013 Score=55.80 Aligned_cols=78 Identities=15% Similarity=0.182 Sum_probs=53.0
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
.+.+++|+|.| .|..|.++++.|.+.|++|.+.|+............+....+.+...+.....+.++|.||...|+.
T Consensus 11 ~~~~~~i~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi~ 88 (458)
T PRK01710 11 FIKNKKVAVVG-IGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSMR 88 (458)
T ss_pred hhcCCeEEEEc-ccHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCCC
Confidence 35678999999 7999999999999999999999976432211111112223455555444334456799999998764
No 396
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.64 E-value=0.0054 Score=57.65 Aligned_cols=76 Identities=13% Similarity=0.202 Sum_probs=52.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
.+.+++++|.| +|++|+.+++.|.+.|. +++++.|+.++. +.+.+.++. ...+..|-....+.+.|+||++.+..
T Consensus 178 ~l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra-~~La~~~~~--~~~~~~~~l~~~l~~aDiVI~aT~a~ 253 (414)
T PRK13940 178 NISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKA-QKITSAFRN--ASAHYLSELPQLIKKADIIIAAVNVL 253 (414)
T ss_pred CccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHhcC--CeEecHHHHHHHhccCCEEEECcCCC
Confidence 36789999999 59999999999999997 677777764433 333333221 23333344445677899999998743
Q ss_pred C
Q 024766 192 S 192 (263)
Q Consensus 192 ~ 192 (263)
.
T Consensus 254 ~ 254 (414)
T PRK13940 254 E 254 (414)
T ss_pred C
Confidence 3
No 397
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.64 E-value=0.0064 Score=50.10 Aligned_cols=38 Identities=26% Similarity=0.354 Sum_probs=33.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF 150 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~ 150 (263)
.+.+|+++|.|+++.+|..+++.|.++|.+|.++.|..
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 57899999999866789999999999999998888753
No 398
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.60 E-value=0.0033 Score=57.26 Aligned_cols=73 Identities=21% Similarity=0.156 Sum_probs=48.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc---cC--CCcEEEEccC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI---LL--EVDQIYHLAC 189 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~---~~--~iD~Vi~~Ag 189 (263)
+.+|||+||+|++|...+..+...|+.++++..+.++.+ .+.+.-...-+++.+.|+.+.. .. ++|+|+...|
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG 220 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVG 220 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCC
Confidence 779999999999999988888888977666665544333 2222211223344455555542 22 5999999886
No 399
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.60 E-value=0.0037 Score=57.25 Aligned_cols=67 Identities=16% Similarity=0.226 Sum_probs=42.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEE---EEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccC
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVI---VIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~---~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
+|.|.||+|++|.+|++.|.++++.++ .+.+....- ..+. +.. .+....|+....+.++|++|-++|
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g-~~~~--~~~--~~~~~~~~~~~~~~~~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG-RKVT--FKG--KELEVNEAKIESFEGIDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC-Ceee--eCC--eeEEEEeCChHHhcCCCEEEECCC
Confidence 478999999999999999999877543 333432211 1111 112 344444554445567888888776
No 400
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.57 E-value=0.0075 Score=52.00 Aligned_cols=69 Identities=20% Similarity=0.331 Sum_probs=52.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------ccCCCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------~~~~iD~Vi~~Ag 189 (263)
|+++|.| .|-+|..+++.|.++|++|++++++++...+... ....+..+.+|-+++ ...+.|+++-..+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~---~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLA---DELDTHVVIGDATDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh---hhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence 4788888 7999999999999999999999986554443222 124677888888876 2456898888775
No 401
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.55 E-value=0.013 Score=52.81 Aligned_cols=35 Identities=23% Similarity=0.291 Sum_probs=31.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG 152 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~ 152 (263)
++|.|+| +|.+|..++..|++.|++|++.+++.+.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~ 37 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAA 37 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence 4799999 8999999999999999999999987543
No 402
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.55 E-value=0.021 Score=50.18 Aligned_cols=65 Identities=15% Similarity=0.252 Sum_probs=40.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC-CCeEEEEe-cCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDR-GDEVIVID-NFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l~-r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
++|.|+|++|.+|+.+++.+.+. +.++..+. +..+.... . ....+...+-.+..+.++|+||.++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~-~------~~~~i~~~~dl~~ll~~~DvVid~t 68 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVG-Q------GALGVAITDDLEAVLADADVLIDFT 68 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc-c------CCCCccccCCHHHhccCCCEEEECC
Confidence 58999999999999999988874 56776644 33322111 1 1111111122233345799999888
No 403
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.53 E-value=0.006 Score=51.79 Aligned_cols=44 Identities=25% Similarity=0.271 Sum_probs=33.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhh
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH 160 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~ 160 (263)
+|++.|.| +|-||..|+++|++.|++|++..|+.++..+...+.
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~ 44 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAA 44 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHh
Confidence 34566655 999999999999999999999877766554444433
No 404
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.53 E-value=0.039 Score=41.46 Aligned_cols=95 Identities=21% Similarity=0.270 Sum_probs=58.6
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
.++++++++|.|| |-+|..-++.|++.|++|+++.... +... ..+.+..-+.. ..+.+.|.||-+.+
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~----~~~~-----~~i~~~~~~~~-~~l~~~~lV~~at~-- 69 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI----EFSE-----GLIQLIRREFE-EDLDGADLVFAATD-- 69 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE----HHHH-----TSCEEEESS-G-GGCTTESEEEE-SS--
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch----hhhh-----hHHHHHhhhHH-HHHhhheEEEecCC--
Confidence 3578899999995 9999999999999999999998653 1111 23444444443 55777898886552
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
+. ..| ..+.+.|++.+ .+|+++..-.++
T Consensus 70 -------d~----~~n----~~i~~~a~~~~-i~vn~~D~p~~~ 97 (103)
T PF13241_consen 70 -------DP----ELN----EAIYADARARG-ILVNVVDDPELC 97 (103)
T ss_dssp --------H----HHH----HHHHHHHHHTT-SEEEETT-CCCC
T ss_pred -------CH----HHH----HHHHHHHhhCC-EEEEECCCcCCC
Confidence 11 122 24566666654 677776654443
No 405
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.49 E-value=0.008 Score=49.78 Aligned_cols=72 Identities=17% Similarity=0.088 Sum_probs=47.5
Q ss_pred CccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 109 ~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
.....+.+++|.|.| .|-||+++++.|...|.+|++.+|........ .. ..+ ..+-.++.+.+.|+|+.+.
T Consensus 29 ~~~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~----~~~---~~~~l~ell~~aDiv~~~~ 99 (178)
T PF02826_consen 29 FPGRELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DE----FGV---EYVSLDELLAQADIVSLHL 99 (178)
T ss_dssp TTBS-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HH----TTE---EESSHHHHHHH-SEEEE-S
T ss_pred CCccccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhc-cc----ccc---eeeehhhhcchhhhhhhhh
Confidence 344568899999999 89999999999999999999999875543201 10 111 2233445566678887766
Q ss_pred C
Q 024766 189 C 189 (263)
Q Consensus 189 g 189 (263)
.
T Consensus 100 p 100 (178)
T PF02826_consen 100 P 100 (178)
T ss_dssp S
T ss_pred c
Confidence 4
No 406
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=96.47 E-value=0.036 Score=50.74 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=55.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCccchhhhhhhcC-----CC-c--eEEEEccccccccCCCcEEEEc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFR-----NP-R--FELIRHDVVEPILLEVDQIYHL 187 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~-----~~-~--v~~~~~Dv~~~~~~~iD~Vi~~ 187 (263)
++|.|+|++|++|++|++.|.+.+ .++..+..+............. .. . .+....+.....+.++|+|+-+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVf~a 80 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPVASKDVDIVFSA 80 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHHHhccCCEEEEe
Confidence 379999999999999999998876 4777774332222122211110 00 0 1111112222234679999988
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcc
Q 024766 188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE 232 (263)
Q Consensus 188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~ 232 (263)
.+. |+ ...+...+.+.|+++|-.|+..
T Consensus 81 ~p~----------------~~--s~~~~~~~~~~G~~VIDlsg~f 107 (341)
T TIGR00978 81 LPS----------------EV--AEEVEPKLAEAGKPVFSNASNH 107 (341)
T ss_pred CCH----------------HH--HHHHHHHHHHCCCEEEECChhh
Confidence 831 11 1123356666788887777764
No 407
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.43 E-value=0.0063 Score=54.66 Aligned_cols=70 Identities=16% Similarity=0.127 Sum_probs=49.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
.+.+++++|.| .|.+|+.++..|...|.+|++++|+.... +.... ..+..+..+...+.+.+.|+||+++
T Consensus 149 ~l~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-~~~~~----~G~~~~~~~~l~~~l~~aDiVI~t~ 218 (296)
T PRK08306 149 TIHGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHL-ARITE----MGLSPFHLSELAEEVGKIDIIFNTI 218 (296)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH----cCCeeecHHHHHHHhCCCCEEEECC
Confidence 45688999999 58899999999999999999999875432 22211 1223333333344567899999986
No 408
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=96.41 E-value=0.029 Score=49.66 Aligned_cols=114 Identities=20% Similarity=0.115 Sum_probs=71.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeE---EEEecC-CccchhhhhhhcCCCceEEEE-ccccccccCCCcEEEEcc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEV---IVIDNF-FTGRKDNLVHHFRNPRFELIR-HDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V---~~l~r~-~~~~~~~~~~~~~~~~v~~~~-~Dv~~~~~~~iD~Vi~~A 188 (263)
..+-+|.|.||+|+||+.|...|. ..+.| .+.|.. .......+.++-....+..+. .|-.+..+.+.|+|+-=|
T Consensus 26 ~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPA 104 (345)
T KOG1494|consen 26 QRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPA 104 (345)
T ss_pred cCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecC
Confidence 345589999999999999986554 44433 333322 122223333332233444444 234455678899999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 024766 189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST 230 (263)
Q Consensus 189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--~iV~vSS 230 (263)
|+.-- ....-++.|.+|---...+..++.+... .+.+||.
T Consensus 105 GVPRK--PGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN 146 (345)
T KOG1494|consen 105 GVPRK--PGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN 146 (345)
T ss_pred CCCCC--CCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence 86432 2334578899999999999998877653 5555554
No 409
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.37 E-value=0.009 Score=51.09 Aligned_cols=37 Identities=27% Similarity=0.447 Sum_probs=32.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR 153 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~ 153 (263)
++|.|+||+|.+|..++..|++.|++|++.+|+.+..
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~ 37 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA 37 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence 4799999999999999999999999999998876544
No 410
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=96.37 E-value=0.015 Score=48.59 Aligned_cols=35 Identities=34% Similarity=0.539 Sum_probs=27.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG 152 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~ 152 (263)
|+|.|.| .|++|..++-.|++.|++|++++.+++.
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~ 35 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEK 35 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHH
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHH
Confidence 5788988 8999999999999999999999976543
No 411
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=96.37 E-value=0.074 Score=51.84 Aligned_cols=127 Identities=16% Similarity=0.277 Sum_probs=76.1
Q ss_pred CccccCCCCEEEEEcC-CChHHHHHHHHHHhCCCeEEEEecCCcc-chhhhhhhc-----CCCceEEEEcccc-------
Q 024766 109 PVGIGRRRLRIVVTGG-AGFVGSHLVDKLIDRGDEVIVIDNFFTG-RKDNLVHHF-----RNPRFELIRHDVV------- 174 (263)
Q Consensus 109 ~~~~~~~~k~vlVTGa-tG~IG~~l~~~Ll~~G~~V~~l~r~~~~-~~~~~~~~~-----~~~~v~~~~~Dv~------- 174 (263)
|.+..+..+.++|||| -|.||.+++..|+..|+.|++...+... +.+-.+.+. .+..+-++..+..
T Consensus 389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA 468 (866)
T COG4982 389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA 468 (866)
T ss_pred CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence 4556678899999998 5899999999999999999987654332 222222221 1222222222221
Q ss_pred ------cc-------------ccCCCcEEEEccCCCCCCCCCC-C--HHHHHHHHHHHHHHHHHHHHHcC--------Ce
Q 024766 175 ------EP-------------ILLEVDQIYHLACPASPVHYKY-N--PVKTIKTNVMGTLNMLGLAKRVG--------AK 224 (263)
Q Consensus 175 ------~~-------------~~~~iD~Vi~~Ag~~~~~~~~~-~--~~~~~~~Nv~gt~~ll~~a~~~~--------~~ 224 (263)
++ .-..+|.+|-+|++.......+ . .+..+++-+-...+++...++.+ .+
T Consensus 469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~h 548 (866)
T COG4982 469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH 548 (866)
T ss_pred HHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence 11 1123899999998654333222 2 34445666666677777765543 25
Q ss_pred EEEEcCc--ceec
Q 024766 225 FLLTSTS--EVYG 235 (263)
Q Consensus 225 iV~vSS~--~vyg 235 (263)
+|+-.|- +.||
T Consensus 549 VVLPgSPNrG~FG 561 (866)
T COG4982 549 VVLPGSPNRGMFG 561 (866)
T ss_pred EEecCCCCCCccC
Confidence 7777663 3454
No 412
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.34 E-value=0.024 Score=54.19 Aligned_cols=74 Identities=20% Similarity=0.167 Sum_probs=51.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
.+.+++|+|.| .|+.|.++++.|.+.|++|.+.++......+ ......+.+...+-....+.++|.||...|+.
T Consensus 12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~----~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~ 85 (473)
T PRK00141 12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHK----LIEVTGVADISTAEASDQLDSFSLVVTSPGWR 85 (473)
T ss_pred cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHH----HHHhcCcEEEeCCCchhHhcCCCEEEeCCCCC
Confidence 45678899999 7999999999999999999999875432211 11122444544432233456789999999864
No 413
>TIGR01408 Ube1 ubiquitin-activating enzyme E1. This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.
Probab=96.32 E-value=0.016 Score=60.13 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=71.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCcc------------------chh----hhhhhcCCCceEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTG------------------RKD----NLVHHFRNPRFELI 169 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~------------------~~~----~~~~~~~~~~v~~~ 169 (263)
.+...+|+|.| .|++|.++++.|+..|. +++++|...-. +.+ .+.+.-...+++..
T Consensus 21 kL~~s~VLIiG-~gGLG~EiaKnL~laGVg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~ 99 (1008)
T TIGR01408 21 KMAKSNVLISG-MGGLGLEIAKNLVLAGVKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNPYVHVSSS 99 (1008)
T ss_pred HHhhCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCCCceEEEe
Confidence 35667899999 68899999999999998 77777643111 011 11111123456666
Q ss_pred EccccccccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCcceecC
Q 024766 170 RHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--AKFLLTSTSEVYGD 236 (263)
Q Consensus 170 ~~Dv~~~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~iV~vSS~~vyg~ 236 (263)
..++.+..+.+.|+||.+- .+.... ..+-++|++.+ +.+|+.++.+.||.
T Consensus 100 ~~~l~~e~l~~fdvVV~t~---------~~~~~~--------~~in~~cr~~~~~I~fI~~~~~G~~G~ 151 (1008)
T TIGR01408 100 SVPFNEEFLDKFQCVVLTE---------MSLPLQ--------KEINDFCHSQCPPIAFISADVRGLFGS 151 (1008)
T ss_pred cccCCHHHHcCCCEEEECC---------CCHHHH--------HHHHHHHHHcCCCeEEEEEeecceEEE
Confidence 6677677788899999864 122222 24557888888 57888888888773
No 414
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.30 E-value=0.0091 Score=57.21 Aligned_cols=72 Identities=15% Similarity=0.241 Sum_probs=47.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
.+++++++|+| +|++|++++..|.+.|++|++.+|+.++..+ +.+.... .....+... .+.+.|+||||...
T Consensus 329 ~~~~k~vlIiG-aGgiG~aia~~L~~~G~~V~i~~R~~~~~~~-la~~~~~---~~~~~~~~~-~l~~~DiVInatP~ 400 (477)
T PRK09310 329 PLNNQHVAIVG-AGGAAKAIATTLARAGAELLIFNRTKAHAEA-LASRCQG---KAFPLESLP-ELHRIDIIINCLPP 400 (477)
T ss_pred CcCCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhcc---ceechhHhc-ccCCCCEEEEcCCC
Confidence 45778999999 5899999999999999999888876543322 2222111 111111111 24579999999854
No 415
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.26 E-value=0.017 Score=51.62 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=34.7
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF 149 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~ 149 (263)
..++||+++|+|+++.+|+.++..|.++|+.|+++.+.
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~ 191 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR 191 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 35799999999999999999999999999999998764
No 416
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.16 E-value=0.017 Score=47.23 Aligned_cols=70 Identities=23% Similarity=0.229 Sum_probs=43.7
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
..+.||+++|.| -|.+|+-+++.|...|.+|++...++-...+...+ .+++.. .++.+...|++|.+.|.
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~d-----Gf~v~~---~~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMD-----GFEVMT---LEEALRDADIFVTATGN 88 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHT-----T-EEE----HHHHTTT-SEEEE-SSS
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhc-----CcEecC---HHHHHhhCCEEEECCCC
Confidence 356899999999 89999999999999999999998876544433332 223322 23455667887777764
No 417
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.15 E-value=0.023 Score=46.44 Aligned_cols=39 Identities=26% Similarity=0.398 Sum_probs=30.9
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF 150 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~ 150 (263)
..++||+++|.|.+..+|+.|+..|.++|+.|.++....
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T 70 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT 70 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC
Confidence 358999999999999999999999999999999876543
No 418
>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.
Probab=96.14 E-value=0.035 Score=52.42 Aligned_cols=101 Identities=16% Similarity=0.187 Sum_probs=63.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC------eEEEEecCCccchh------------------h----hhhhcCCCceEEE
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD------EVIVIDNFFTGRKD------------------N----LVHHFRNPRFELI 169 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~------~V~~l~r~~~~~~~------------------~----~~~~~~~~~v~~~ 169 (263)
+|+|.| +|+||.++++.|+..|. ++.++|...-+... . +.+.-...+++.+
T Consensus 1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~ 79 (435)
T cd01490 1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL 79 (435)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence 478888 79999999999999997 78887754211110 0 1111122344445
Q ss_pred Ecccc--------ccccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 170 RHDVV--------EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 170 ~~Dv~--------~~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
...+. +..+.+.|+|+++. .|+..-..+-+.|...++.+|..++.+.+|.
T Consensus 80 ~~~v~~~~~~~~~~~f~~~~DvVi~al-----------------Dn~~aR~~vn~~C~~~~iPli~~gt~G~~G~ 137 (435)
T cd01490 80 QNRVGPETEHIFNDEFWEKLDGVANAL-----------------DNVDARMYVDRRCVYYRKPLLESGTLGTKGN 137 (435)
T ss_pred ecccChhhhhhhhHHHhcCCCEEEECC-----------------CCHHHHHHHHHHHHHhCCCEEEEecccceeE
Confidence 44332 12346689999877 2233333566677778788888888777774
No 419
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=96.13 E-value=0.04 Score=52.23 Aligned_cols=77 Identities=18% Similarity=0.102 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS 192 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~ 192 (263)
+.+|+|+|.| -|.-|.++++.|.+.|++|++.|.++.. ............+++..+...+....++|+||-+.|+..
T Consensus 5 ~~~~kv~V~G-LG~sG~a~a~~L~~~G~~v~v~D~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~~ 81 (448)
T COG0771 5 FQGKKVLVLG-LGKSGLAAARFLLKLGAEVTVSDDRPAP-EGLAAQPLLLEGIEVELGSHDDEDLAEFDLVVKSPGIPP 81 (448)
T ss_pred ccCCEEEEEe-cccccHHHHHHHHHCCCeEEEEcCCCCc-cchhhhhhhccCceeecCccchhccccCCEEEECCCCCC
Confidence 4488999999 7999999999999999999999976554 111111112345556655555566678999999998754
No 420
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.11 E-value=0.013 Score=55.11 Aligned_cols=72 Identities=15% Similarity=0.338 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
+.+++++|.|+ |.+|..+++.|...| .+|++++|+.+...+... .++. ..+..+-......+.|+||.+.+.
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~-~~g~---~~i~~~~l~~~l~~aDvVi~aT~s 250 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAK-ELGG---EAVKFEDLEEYLAEADIVISSTGA 250 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HcCC---eEeeHHHHHHHHhhCCEEEECCCC
Confidence 67889999995 999999999999999 589998887543322222 2221 233333333455679999998763
No 421
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.11 E-value=0.012 Score=52.47 Aligned_cols=74 Identities=18% Similarity=0.083 Sum_probs=47.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhc---CCCceEEEEcccc--ccccCCCcEEEEc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVV--EPILLEVDQIYHL 187 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~---~~~~v~~~~~Dv~--~~~~~~iD~Vi~~ 187 (263)
.++|+++|.| +|+.|++++..|++.|. +++++.|..++.++...... ....+.. .+.. +....+.|+|||+
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~--~~~~~~~~~~~~~divINa 201 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVG--VDARGIEDVIAAADGVVNA 201 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEe--cCHhHHHHHHhhcCEEEEc
Confidence 5678999999 59999999999999997 78888886554433322211 1111222 2221 2234568999998
Q ss_pred cCC
Q 024766 188 ACP 190 (263)
Q Consensus 188 Ag~ 190 (263)
..+
T Consensus 202 Tp~ 204 (283)
T PRK14027 202 TPM 204 (283)
T ss_pred CCC
Confidence 754
No 422
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.04 E-value=0.069 Score=50.50 Aligned_cols=75 Identities=15% Similarity=0.104 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccc-hhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR-KDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
+.+|+|+|+|+ |.+|.++++.|+++|++|.+.+...... .+.+... ...+.+..++..+....+.|.||...|+.
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~--~~gi~~~~g~~~~~~~~~~d~vv~spgi~ 78 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKM--FDGLVFYTGRLKDALDNGFDILALSPGIS 78 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhc--cCCcEEEeCCCCHHHHhCCCEEEECCCCC
Confidence 45789999995 6899999999999999999998654321 1111110 12455555544444456799999999864
No 423
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.02 E-value=0.016 Score=54.67 Aligned_cols=73 Identities=21% Similarity=0.298 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
+.+++++|.| +|.+|..+++.|...|. +|++++|+.+...+... .++. ..+..+-....+.+.|+||.+.+..
T Consensus 180 ~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~-~~g~---~~~~~~~~~~~l~~aDvVI~aT~s~ 253 (423)
T PRK00045 180 LSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAE-EFGG---EAIPLDELPEALAEADIVISSTGAP 253 (423)
T ss_pred ccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH-HcCC---cEeeHHHHHHHhccCCEEEECCCCC
Confidence 6788999999 59999999999999997 78888886544332222 2221 2333232334456789999998643
No 424
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.02 E-value=0.099 Score=44.23 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=31.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNF 149 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~ 149 (263)
.++.++|+|.| .|++|+.++..|++.|. +++++|..
T Consensus 18 ~L~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICG-LGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 46778999999 59999999999999999 79998876
No 425
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=96.00 E-value=0.062 Score=49.63 Aligned_cols=96 Identities=15% Similarity=0.129 Sum_probs=56.7
Q ss_pred CEEEEEcCCChHHHHHHHHHH-hCCCe---EEEEecCCccchhhhhhhcCCCceEEEEcccccc-ccCCCcEEEEccCCC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLI-DRGDE---VIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-ILLEVDQIYHLACPA 191 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll-~~G~~---V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-~~~~iD~Vi~~Ag~~ 191 (263)
++|.|.||||.+|+.+.+.|. ++... ++.+.-. +.......++.... ...++.+. .+.++|++|.++|-.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~---~s~g~~~~f~~~~~--~v~~~~~~~~~~~vDivffa~g~~ 75 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTS---QLGQAAPSFGGTTG--TLQDAFDIDALKALDIIITCQGGD 75 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEch---hhCCCcCCCCCCcc--eEEcCcccccccCCCEEEEcCCHH
Confidence 478999999999999999999 55554 3333321 11111112222232 33344443 677899999999521
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
-+..+...+++.|...+.|+.++.|-
T Consensus 76 ------------------~s~~~~p~~~~aG~~~~VIDnSSa~R 101 (366)
T TIGR01745 76 ------------------YTNEIYPKLRESGWQGYWIDAASSLR 101 (366)
T ss_pred ------------------HHHHHHHHHHhCCCCeEEEECChhhh
Confidence 12356677778885444555554453
No 426
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=95.99 E-value=0.031 Score=53.35 Aligned_cols=72 Identities=19% Similarity=0.220 Sum_probs=50.6
Q ss_pred cCCCCEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc
Q 024766 113 GRRRLRIVVTGG----------------AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176 (263)
Q Consensus 113 ~~~~k~vlVTGa----------------tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~ 176 (263)
+++||+|+||+| ||-.|.+|++.+..+|++|+++.-... .. ....++.+..+-.++
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~-------~p~~v~~i~V~ta~e 324 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA-------DPQGVKVIHVESARQ 324 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC-------CCCCceEEEecCHHH
Confidence 489999999975 689999999999999999999873221 10 123455555544333
Q ss_pred c------cCCCcEEEEccCCCC
Q 024766 177 I------LLEVDQIYHLACPAS 192 (263)
Q Consensus 177 ~------~~~iD~Vi~~Ag~~~ 192 (263)
. ....|++|++|++..
T Consensus 325 M~~av~~~~~~Di~I~aAAVaD 346 (475)
T PRK13982 325 MLAAVEAALPADIAIFAAAVAD 346 (475)
T ss_pred HHHHHHhhCCCCEEEEeccccc
Confidence 1 123799999998643
No 427
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.95 E-value=0.021 Score=53.38 Aligned_cols=75 Identities=17% Similarity=0.341 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS 192 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~ 192 (263)
+++++++|.| .|=+|.-+++.|.+.|. +|+++.|..++ ...+...+ ..+++..|-....+.+.|+||-+.|-..
T Consensus 176 L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~er-A~~La~~~---~~~~~~l~el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 176 LKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLER-AEELAKKL---GAEAVALEELLEALAEADVVISSTSAPH 250 (414)
T ss_pred cccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHH-HHHHHHHh---CCeeecHHHHHHhhhhCCEEEEecCCCc
Confidence 6889999999 69999999999999996 66666654443 33333332 3667777777778889999999986443
Q ss_pred C
Q 024766 193 P 193 (263)
Q Consensus 193 ~ 193 (263)
+
T Consensus 251 ~ 251 (414)
T COG0373 251 P 251 (414)
T ss_pred c
Confidence 3
No 428
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=95.92 E-value=0.053 Score=48.18 Aligned_cols=39 Identities=23% Similarity=0.152 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG 152 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~ 152 (263)
..+.+++|+|+++.+|..+++.+...|.+|++++++...
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~ 203 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDK 203 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 356799999999999999999999999999988876443
No 429
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.91 E-value=0.036 Score=44.28 Aligned_cols=39 Identities=28% Similarity=0.358 Sum_probs=35.4
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF 149 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~ 149 (263)
+.+++||+|+|.|.+.-+|+.++..|.++|..|.++.+.
T Consensus 23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~ 61 (140)
T cd05212 23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWK 61 (140)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCC
Confidence 346899999999999999999999999999999998754
No 430
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=95.91 E-value=0.042 Score=50.26 Aligned_cols=96 Identities=18% Similarity=0.179 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
+..+|.|.||||++|.+|++.|.++.+ ++..+..... ..+.+. +....+.+. |+.+..+.++|++|.+++..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~s-aG~~~~--~~~~~~~v~--~~~~~~~~~~Dvvf~a~p~~ 77 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEES-AGETLR--FGGKSVTVQ--DAAEFDWSQAQLAFFVAGRE 77 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCc-CCceEE--ECCcceEEE--eCchhhccCCCEEEECCCHH
Confidence 345899999999999999999999533 6655543211 111111 122222222 43333446899999988421
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcce
Q 024766 192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~v 233 (263)
-...++..+.+.|+++|=.|+..=
T Consensus 78 ------------------~s~~~~~~~~~~g~~VIDlS~~fR 101 (336)
T PRK08040 78 ------------------ASAAYAEEATNAGCLVIDSSGLFA 101 (336)
T ss_pred ------------------HHHHHHHHHHHCCCEEEECChHhc
Confidence 122455556666778777777643
No 431
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.90 E-value=0.019 Score=51.90 Aligned_cols=72 Identities=15% Similarity=0.266 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
+.+++|+|.|+ |.+|..+++.|...|. +|++++|+.++..+...+ ++. ..+..|-....+.+.|+||.+.+.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~-~g~---~~~~~~~~~~~l~~aDvVi~at~~ 248 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE-LGG---NAVPLDELLELLNEADVVISATGA 248 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH-cCC---eEEeHHHHHHHHhcCCEEEECCCC
Confidence 57889999995 9999999999998764 788888765543333222 222 333333333445679999999863
No 432
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.88 E-value=0.014 Score=52.49 Aligned_cols=72 Identities=17% Similarity=0.177 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCce-EEE-EccccccccCCCcEEEEcc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRF-ELI-RHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v-~~~-~~Dv~~~~~~~iD~Vi~~A 188 (263)
.|+++.|+|+.| +|.-=++.-.+.|.+|+++++...++++..... +...+ ... +.|.......-.|.++|++
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-GAd~fv~~~~d~d~~~~~~~~~dg~~~~v 254 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-GADVFVDSTEDPDIMKAIMKTTDGGIDTV 254 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-CcceeEEecCCHHHHHHHHHhhcCcceee
Confidence 788999999877 998666666667999999999876666655444 33333 333 4566666666667777766
No 433
>PRK14851 hypothetical protein; Provisional
Probab=95.87 E-value=0.05 Score=54.31 Aligned_cols=105 Identities=10% Similarity=0.026 Sum_probs=64.4
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccc------------------hh----hhhhhcCCCceEE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGR------------------KD----NLVHHFRNPRFEL 168 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~------------------~~----~~~~~~~~~~v~~ 168 (263)
..++.++|+|.| .|++|.++++.|+..|. +++++|...-.. .+ .+.++-...+++.
T Consensus 39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~ 117 (679)
T PRK14851 39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITP 117 (679)
T ss_pred HHHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEE
Confidence 346788999999 79999999999999998 777776431000 00 0111112335666
Q ss_pred EEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcc
Q 024766 169 IRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE 232 (263)
Q Consensus 169 ~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~ 232 (263)
+...+.+ ..+.++|+||.+. . ++ .+..-..+.+.|.+.++.+|..+..+
T Consensus 118 ~~~~i~~~n~~~~l~~~DvVid~~---D------~~------~~~~r~~l~~~c~~~~iP~i~~g~~G 170 (679)
T PRK14851 118 FPAGINADNMDAFLDGVDVVLDGL---D------FF------QFEIRRTLFNMAREKGIPVITAGPLG 170 (679)
T ss_pred EecCCChHHHHHHHhCCCEEEECC---C------CC------cHHHHHHHHHHHHHCCCCEEEeeccc
Confidence 6666543 3456899999776 1 11 01111235567788877777766543
No 434
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.84 E-value=0.043 Score=49.11 Aligned_cols=77 Identities=10% Similarity=0.014 Sum_probs=48.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCc--cchhhhhhhcCC---CceEEEEcccc---ccccCCCcE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT--GRKDNLVHHFRN---PRFELIRHDVV---EPILLEVDQ 183 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~--~~~~~~~~~~~~---~~v~~~~~Dv~---~~~~~~iD~ 183 (263)
..++|+++|.| +|+-+++++-.|+..|. +|+++.|+.+ .+.+.+.+.+.. ..+.+...+-. .....+.|+
T Consensus 121 ~~~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDi 199 (288)
T PRK12749 121 DIKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI 199 (288)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCE
Confidence 45788999999 47779999999999997 8888888753 233333332221 11222222111 123457899
Q ss_pred EEEccCC
Q 024766 184 IYHLACP 190 (263)
Q Consensus 184 Vi~~Ag~ 190 (263)
|||+..+
T Consensus 200 vINaTp~ 206 (288)
T PRK12749 200 LTNGTKV 206 (288)
T ss_pred EEECCCC
Confidence 9998644
No 435
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=95.83 E-value=0.021 Score=50.88 Aligned_cols=71 Identities=21% Similarity=0.168 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc---ccCCCcEEEEccC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP---ILLEVDQIYHLAC 189 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~---~~~~iD~Vi~~Ag 189 (263)
.+.+++|+||+|.+|..+++.+...|.+|+++.++.+.. +.+... ... ..+..+.... ...++|++++++|
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~-~~~--~~~~~~~~~~~~~~~~~~d~v~~~~g 235 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKL-KILKEL-GAD--YVIDGSKFSEDVKKLGGADVVIELVG 235 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHHc-CCc--EEEecHHHHHHHHhccCCCEEEECCC
Confidence 467999999999999999999999999999988754432 222211 111 1222111111 1236999999986
No 436
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=95.83 E-value=0.035 Score=57.68 Aligned_cols=72 Identities=22% Similarity=0.279 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC-Ce-------------EEEEecCCccchhhhhhhcCCCceEEEEcccccc---
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRG-DE-------------VIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--- 176 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G-~~-------------V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~--- 176 (263)
.++|+|+|.| +|+||+..++.|++.+ ++ |.+.++..+..++ +... ..++..+..|+.|.
T Consensus 567 ~~~~rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~-la~~--~~~~~~v~lDv~D~e~L 642 (1042)
T PLN02819 567 KKSQNVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKE-TVEG--IENAEAVQLDVSDSESL 642 (1042)
T ss_pred ccCCcEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHH-HHHh--cCCCceEEeecCCHHHH
Confidence 3578999999 5999999999998763 23 6666665433222 2221 12456677776653
Q ss_pred --ccCCCcEEEEccC
Q 024766 177 --ILLEVDQIYHLAC 189 (263)
Q Consensus 177 --~~~~iD~Vi~~Ag 189 (263)
.+.++|+||++..
T Consensus 643 ~~~v~~~DaVIsalP 657 (1042)
T PLN02819 643 LKYVSQVDVVISLLP 657 (1042)
T ss_pred HHhhcCCCEEEECCC
Confidence 2356999999985
No 437
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.82 E-value=0.035 Score=52.40 Aligned_cols=67 Identities=21% Similarity=0.309 Sum_probs=49.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------ccCCCcEEEEcc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLA 188 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------~~~~iD~Vi~~A 188 (263)
|+|+|.|+ |.+|..+++.|.++|++|++++++.+...+ +. ....+.++.+|.++. ...++|.||-+.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~-~~---~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRR-LQ---DRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHH-HH---hhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 47899996 999999999999999999999886543222 11 123577788887664 245688887766
No 438
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.82 E-value=0.021 Score=53.80 Aligned_cols=68 Identities=21% Similarity=0.122 Sum_probs=48.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
.+.+++|+|+| .|.||+.++..|...|.+|+++++++....+.... .+.+. + .++.+.+.|+||.+.|
T Consensus 209 ~l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~-----G~~v~--~-l~eal~~aDVVI~aTG 276 (425)
T PRK05476 209 LIAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMD-----GFRVM--T-MEEAAELGDIFVTATG 276 (425)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc-----CCEec--C-HHHHHhCCCEEEECCC
Confidence 36899999999 69999999999999999999998875543222111 12222 2 2344567899998874
No 439
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.81 E-value=0.015 Score=47.36 Aligned_cols=65 Identities=20% Similarity=0.131 Sum_probs=41.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
|++|-+.| .|-+|..+++.|++.|++|.+.+|+.++.++..... ...+|-..+...+.|+|+-+.
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-------~~~~~s~~e~~~~~dvvi~~v 65 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-------AEVADSPAEAAEQADVVILCV 65 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-------EEEESSHHHHHHHBSEEEE-S
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-------hhhhhhhhhHhhcccceEeec
Confidence 46899999 799999999999999999999988754433322211 333343344444556666654
No 440
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.80 E-value=0.075 Score=50.11 Aligned_cols=71 Identities=23% Similarity=0.303 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEcccccc------ccCCCcEEEEc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHL 187 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~------~~~~iD~Vi~~ 187 (263)
...++++|.|+ |.+|..+++.|.+.|++|++++++++...+ +.+. ...+.++.+|.+++ ...+.|.||-+
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~-~~~~--~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~ 304 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEE-LAEE--LPNTLVLHGDGTDQELLEEEGIDEADAFIAL 304 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HHHH--CCCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence 35688999995 999999999999999999999876553322 2211 23567888898776 33468888866
Q ss_pred c
Q 024766 188 A 188 (263)
Q Consensus 188 A 188 (263)
.
T Consensus 305 ~ 305 (453)
T PRK09496 305 T 305 (453)
T ss_pred C
Confidence 5
No 441
>PLN00203 glutamyl-tRNA reductase
Probab=95.77 E-value=0.028 Score=54.42 Aligned_cols=75 Identities=20% Similarity=0.311 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
+.+++|+|.|+ |.+|..+++.|...|. +|+++.|+.+...+ +...+....+.+...|-....+.+.|+||.+.+.
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~-La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s 339 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAA-LREEFPDVEIIYKPLDEMLACAAEADVVFTSTSS 339 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHH-HHHHhCCCceEeecHhhHHHHHhcCCEEEEccCC
Confidence 66899999995 9999999999999997 78888887554333 2222222233333444334556789999998753
No 442
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=95.76 E-value=0.015 Score=52.43 Aligned_cols=72 Identities=21% Similarity=0.054 Sum_probs=44.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCCCceE-EEEccccccc---c-CCCcEEEEccC
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFE-LIRHDVVEPI---L-LEVDQIYHLAC 189 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~v~-~~~~Dv~~~~---~-~~iD~Vi~~Ag 189 (263)
.+|+|+||+|.+|..++..+...|. +|++++++.++. +.+.+.++...+. .-..|+.+.. . .++|+++++.|
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~-~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g 233 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKC-QLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVG 233 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCC
Confidence 7999999999999999988888898 799887754432 2222212222111 1111222211 1 36899999885
No 443
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.75 E-value=0.016 Score=53.65 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEc--cccccccCCCcEEEEccCC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH--DVVEPILLEVDQIYHLACP 190 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~--Dv~~~~~~~iD~Vi~~Ag~ 190 (263)
.+++++|+|+ |.+|...++.+...|.+|++++++.+... .+...+. ..+..... +...+.+.+.|+||++++.
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~-~l~~~~g-~~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLR-QLDAEFG-GRIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH-HHHHhcC-ceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 4567999985 99999999999999999999998654322 2222211 11111111 1123345679999999854
No 444
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=95.75 E-value=0.054 Score=46.25 Aligned_cols=77 Identities=17% Similarity=0.243 Sum_probs=52.9
Q ss_pred CCccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEc
Q 024766 108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHL 187 (263)
Q Consensus 108 ~~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~ 187 (263)
.|...++++|+|+|.| +|-+|..=++.|++.|++|+++.-.. .+++.......++..+..+.....+.+++.||-+
T Consensus 4 lPl~~~l~~k~VlvvG-gG~va~rKa~~ll~~ga~v~Vvs~~~---~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaA 79 (210)
T COG1648 4 LPLFLDLEGKKVLVVG-GGSVALRKARLLLKAGADVTVVSPEF---EPELKALIEEGKIKWIEREFDAEDLDDAFLVIAA 79 (210)
T ss_pred cceEEEcCCCEEEEEC-CCHHHHHHHHHHHhcCCEEEEEcCCc---cHHHHHHHHhcCcchhhcccChhhhcCceEEEEe
Confidence 5677788999999999 69999999999999999999987544 2333333333444455433333344456666655
Q ss_pred c
Q 024766 188 A 188 (263)
Q Consensus 188 A 188 (263)
.
T Consensus 80 t 80 (210)
T COG1648 80 T 80 (210)
T ss_pred C
Confidence 5
No 445
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=95.74 E-value=0.07 Score=50.23 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=33.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccch
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK 154 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~ 154 (263)
.++|.|.| .|++|..++..|++.|++|++++++++..+
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~ 40 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVD 40 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 36899998 799999999999999999999998755443
No 446
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.74 E-value=0.035 Score=49.89 Aligned_cols=41 Identities=22% Similarity=0.177 Sum_probs=36.3
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT 151 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~ 151 (263)
+..++||+|.|.|.+|.+|+.++..|+++|+.|++..+...
T Consensus 154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~ 194 (301)
T PRK14194 154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST 194 (301)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence 34679999999999999999999999999999999876543
No 447
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.73 E-value=0.061 Score=51.64 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
+.+++|+|.| .|.+|...++.|.++|++|++.|+..... +.+. ...+.+...+.....+.++|+||.+.|+.
T Consensus 10 ~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~-~~l~----~~g~~~~~~~~~~~~l~~~D~VV~SpGi~ 81 (488)
T PRK03369 10 LPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDAL-RPHA----ERGVATVSTSDAVQQIADYALVVTSPGFR 81 (488)
T ss_pred cCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHH----hCCCEEEcCcchHhHhhcCCEEEECCCCC
Confidence 4678999999 78999999999999999999998653321 1111 12344444433334456789999999864
No 448
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=95.68 E-value=0.02 Score=52.64 Aligned_cols=75 Identities=21% Similarity=0.238 Sum_probs=46.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcC-CCceEEEEcccccccc----CCCcEEEE
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEPIL----LEVDQIYH 186 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~----~~iD~Vi~ 186 (263)
..+++.|||.||+|++|++.++-....|. .|+.++ +.+. .+ +.+.++ ..-+++-..|+.+... .++|+|+.
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~e~-~~-l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SKEK-LE-LVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-ccch-HH-HHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 34678999999999999999988888884 555444 3222 12 222222 2223344444444432 35999999
Q ss_pred ccCC
Q 024766 187 LACP 190 (263)
Q Consensus 187 ~Ag~ 190 (263)
|+|-
T Consensus 232 ~vg~ 235 (347)
T KOG1198|consen 232 CVGG 235 (347)
T ss_pred CCCC
Confidence 9974
No 449
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.67 E-value=0.044 Score=48.92 Aligned_cols=38 Identities=32% Similarity=0.413 Sum_probs=34.5
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF 149 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~ 149 (263)
..+.||+++|.|.+..+|+.|+..|+++|+.|+++.+.
T Consensus 155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~ 192 (285)
T PRK10792 155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF 192 (285)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC
Confidence 45789999999999999999999999999999988754
No 450
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.67 E-value=0.15 Score=43.90 Aligned_cols=77 Identities=10% Similarity=0.235 Sum_probs=57.8
Q ss_pred CCccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEc
Q 024766 108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHL 187 (263)
Q Consensus 108 ~~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~ 187 (263)
.|+...+++++++|.| +|-++..=++.|++.|++|+++.-... +.+.......++.+..-+.....+.+.+.||-+
T Consensus 17 ~pi~l~~~~~~VLVVG-GG~VA~RK~~~Ll~~gA~VtVVap~i~---~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaA 92 (223)
T PRK05562 17 MFISLLSNKIKVLIIG-GGKAAFIKGKTFLKKGCYVYILSKKFS---KEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIA 92 (223)
T ss_pred eeeEEECCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCCC---HHHHHHHhCCCEEEEeCCCChHHhCCCcEEEEC
Confidence 4666677899999999 599999999999999999999874322 223333345667777777666677788888877
Q ss_pred c
Q 024766 188 A 188 (263)
Q Consensus 188 A 188 (263)
.
T Consensus 93 T 93 (223)
T PRK05562 93 T 93 (223)
T ss_pred C
Confidence 6
No 451
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.65 E-value=0.048 Score=48.69 Aligned_cols=110 Identities=16% Similarity=0.136 Sum_probs=63.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCCCceEEEEccccccccC-CCcEEEEccCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL-EVDQIYHLACP 190 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~-~iD~Vi~~Ag~ 190 (263)
..++++++|.| +|+.+++++..|++.|. +++++.|..++.++ +.+.+..........+..+.... +.|+|||+...
T Consensus 123 ~~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~-La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~ 200 (283)
T COG0169 123 DVTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEE-LADLFGELGAAVEAAALADLEGLEEADLLINATPV 200 (283)
T ss_pred ccCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHhhhcccccccccccccccccccCEEEECCCC
Confidence 44689999999 69999999999999996 78888887665433 33333222111111112111112 68999999764
Q ss_pred CCCCCCCCC--HHHH-------HHHHHHH-HHHHHHHHHHcCCe
Q 024766 191 ASPVHYKYN--PVKT-------IKTNVMG-TLNMLGLAKRVGAK 224 (263)
Q Consensus 191 ~~~~~~~~~--~~~~-------~~~Nv~g-t~~ll~~a~~~~~~ 224 (263)
......... .... +++++.- ---+++.|++.|++
T Consensus 201 Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~ 244 (283)
T COG0169 201 GMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK 244 (283)
T ss_pred CCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence 332221110 0111 1333331 33578888888877
No 452
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=95.64 E-value=0.023 Score=51.38 Aligned_cols=39 Identities=15% Similarity=0.093 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG 152 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~ 152 (263)
..|.+++|+||+|.+|..++..+...|.+|++++++.++
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~ 188 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEK 188 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 357899999999999999998888899999988876443
No 453
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.54 E-value=0.095 Score=47.64 Aligned_cols=26 Identities=35% Similarity=0.535 Sum_probs=23.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD 141 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~ 141 (263)
+++|.|.||||-+|+.+++.|.++..
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f 26 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHF 26 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCC
Confidence 35899999999999999999999755
No 454
>PRK07574 formate dehydrogenase; Provisional
Probab=95.52 E-value=0.031 Score=52.06 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=49.3
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
..+.+|+|.|.| .|-||+.+++.|...|.+|++.+|...... .... ..+. ..+-.++.+.+.|+|+.+..
T Consensus 188 ~~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~--~~~~---~g~~--~~~~l~ell~~aDvV~l~lP 257 (385)
T PRK07574 188 YDLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEE--VEQE---LGLT--YHVSFDSLVSVCDVVTIHCP 257 (385)
T ss_pred eecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchh--hHhh---cCce--ecCCHHHHhhcCCEEEEcCC
Confidence 458899999999 799999999999999999999987642211 1111 1111 12334566778999987773
No 455
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.51 E-value=0.033 Score=52.76 Aligned_cols=66 Identities=21% Similarity=0.202 Sum_probs=45.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
++|.|+||+|.+|..+++.|.+.|++|++.+|+.+...+..... .+. . .+.......+.|+||-+.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~----gv~-~-~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL----GVE-Y-ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc----CCe-e-ccCHHHHhccCCEEEEec
Confidence 47999999999999999999999999999998654322221111 111 1 111223456789998877
No 456
>PRK14852 hypothetical protein; Provisional
Probab=95.51 E-value=0.075 Score=54.72 Aligned_cols=108 Identities=14% Similarity=0.019 Sum_probs=66.8
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccc------------------h----hhhhhhcCCCceEE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGR------------------K----DNLVHHFRNPRFEL 168 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~------------------~----~~~~~~~~~~~v~~ 168 (263)
..++..+|+|.| .|++|..+++.|+..|. +++++|...-.. . +.+.++-...+++.
T Consensus 328 ~kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~ 406 (989)
T PRK14852 328 RRLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRS 406 (989)
T ss_pred HHHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEE
Confidence 356888999999 79999999999999998 777765431100 0 01111112335555
Q ss_pred EEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceec
Q 024766 169 IRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235 (263)
Q Consensus 169 ~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg 235 (263)
+...+.+ ..+.++|+||.+.- ++. +..-..+.+.|.+.++.+|..++.+.+|
T Consensus 407 ~~~~I~~en~~~fl~~~DiVVDa~D---------~~~------~~~rr~l~~~c~~~~IP~I~ag~~G~~g 462 (989)
T PRK14852 407 FPEGVAAETIDAFLKDVDLLVDGID---------FFA------LDIRRRLFNRALELGIPVITAGPLGYSC 462 (989)
T ss_pred EecCCCHHHHHHHhhCCCEEEECCC---------Ccc------HHHHHHHHHHHHHcCCCEEEeeccccCe
Confidence 5554433 35678999998771 110 0111245566778888888887765554
No 457
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.50 E-value=0.057 Score=48.91 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=47.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
.+.+|+|.|.| .|.||+.+++.|...|.+|++.++...... .-......+-.++.+.+.|+|+.+.
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~---------~~~~~~~~~~l~e~l~~aDvvv~~l 198 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP---------GVQSFAGREELSAFLSQTRVLINLL 198 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC---------CceeecccccHHHHHhcCCEEEECC
Confidence 56889999999 899999999999999999999887533211 0001112333456677889998877
No 458
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=95.48 E-value=0.19 Score=38.62 Aligned_cols=30 Identities=27% Similarity=0.636 Sum_probs=25.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhC-CCeEEEEe
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDR-GDEVIVID 147 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l~ 147 (263)
++.|+|++|.+|..+++.|.+. +.++..+.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~ 31 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALA 31 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEE
Confidence 4789999999999999999994 77887773
No 459
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=95.46 E-value=0.094 Score=49.89 Aligned_cols=73 Identities=19% Similarity=0.112 Sum_probs=50.2
Q ss_pred cCCCCEEEEEcCCChHHHH-HHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 113 GRRRLRIVVTGGAGFVGSH-LVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~-l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
..++|+|+|.| -|..|.. +++.|.++|++|.+.|.......+.+ ....+.+.... ....+.++|.||...|+.
T Consensus 4 ~~~~~~v~viG-~G~sG~s~~a~~L~~~G~~V~~~D~~~~~~~~~l----~~~gi~~~~~~-~~~~~~~~d~vv~spgi~ 77 (461)
T PRK00421 4 LRRIKRIHFVG-IGGIGMSGLAEVLLNLGYKVSGSDLKESAVTQRL----LELGAIIFIGH-DAENIKDADVVVYSSAIP 77 (461)
T ss_pred cCCCCEEEEEE-EchhhHHHHHHHHHhCCCeEEEECCCCChHHHHH----HHCCCEEeCCC-CHHHCCCCCEEEECCCCC
Confidence 35667899999 5779999 89999999999999987544322222 12234444322 233455799999999864
No 460
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.46 E-value=0.043 Score=51.60 Aligned_cols=68 Identities=22% Similarity=0.148 Sum_probs=48.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
.+.|++|+|.| .|.||..++..+...|.+|+++++++.+...... ..+..+.. ++.+.+.|+||.++|
T Consensus 199 ~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-----~G~~~~~~---~e~v~~aDVVI~atG 266 (413)
T cd00401 199 MIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-----EGYEVMTM---EEAVKEGDIFVTTTG 266 (413)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-----cCCEEccH---HHHHcCCCEEEECCC
Confidence 36899999999 7999999999999999999998876554322211 11222221 234567899999885
No 461
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.44 E-value=0.054 Score=40.99 Aligned_cols=64 Identities=25% Similarity=0.404 Sum_probs=46.5
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------cCCCcEEEEcc
Q 024766 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------LLEVDQIYHLA 188 (263)
Q Consensus 119 vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------~~~iD~Vi~~A 188 (263)
|+|.| .|-+|..+++.|.+.+.+|++++++++...+.. ...+.++.+|.+++. +.+.|.|+-+.
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~ 70 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELR-----EEGVEVIYGDATDPEVLERAGIEKADAVVILT 70 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-----HTTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-----hcccccccccchhhhHHhhcCccccCEEEEcc
Confidence 56777 589999999999998779999997644422221 223789999998873 35688888877
No 462
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=95.43 E-value=0.089 Score=38.04 Aligned_cols=35 Identities=31% Similarity=0.523 Sum_probs=29.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEec
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDN 148 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~-G~~V~~l~r 148 (263)
.+.+++++|.|+ |.+|+.++..|.+. +.+|.+.+|
T Consensus 20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 467789999996 99999999999998 557777654
No 463
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.42 E-value=0.059 Score=48.14 Aligned_cols=37 Identities=22% Similarity=0.334 Sum_probs=33.8
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN 148 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r 148 (263)
..+.||+++|.|.+..+|+.|+..|.++|+.|.++..
T Consensus 160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs 196 (287)
T PRK14176 160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHV 196 (287)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEec
Confidence 4579999999999999999999999999999988764
No 464
>PLN02494 adenosylhomocysteinase
Probab=95.40 E-value=0.039 Score=52.53 Aligned_cols=68 Identities=19% Similarity=0.184 Sum_probs=46.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
.+.||+++|.| .|.||+.+++.+...|.+|+++++++....+..... +... ++ ++.+.+.|+||.+.|
T Consensus 251 ~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G-----~~vv--~l-eEal~~ADVVI~tTG 318 (477)
T PLN02494 251 MIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEG-----YQVL--TL-EDVVSEADIFVTTTG 318 (477)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcC-----Ceec--cH-HHHHhhCCEEEECCC
Confidence 36899999999 799999999999999999999887654432222111 1111 22 334556777777664
No 465
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=95.35 E-value=0.08 Score=47.58 Aligned_cols=108 Identities=22% Similarity=0.270 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchh------------------hhhhhc----C----CCce
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKD------------------NLVHHF----R----NPRF 166 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~------------------~~~~~~----~----~~~v 166 (263)
+++.-|+|.| +|++|++++..|++.|. ++.+++-..-.... .+.+++ . ..+.
T Consensus 72 l~~syVVVVG-~GgVGSwv~nmL~RSG~qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~skiaPw~eIdar~ 150 (430)
T KOG2018|consen 72 LTNSYVVVVG-AGGVGSWVANMLLRSGVQKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKIAPWCEIDARN 150 (430)
T ss_pred hcCcEEEEEe-cCchhHHHHHHHHHhcCceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhhCccceecHHH
Confidence 4666788888 79999999999999998 56666533221111 011111 0 0111
Q ss_pred EEEEcccccc-ccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCCCC
Q 024766 167 ELIRHDVVEP-ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLE 239 (263)
Q Consensus 167 ~~~~~Dv~~~-~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~~~ 239 (263)
.++..+..+. .++++|.|+.|. .|+..-..+++.|-.+|.++|--..++.-.+|..
T Consensus 151 ~l~~~~s~edll~gnPdFvvDci-----------------DNidtKVdLL~y~~~~~l~Viss~GaaaksDPTr 207 (430)
T KOG2018|consen 151 MLWTSSSEEDLLSGNPDFVVDCI-----------------DNIDTKVDLLEYCYNHGLKVISSTGAAAKSDPTR 207 (430)
T ss_pred hhcCCCchhhhhcCCCCeEeEhh-----------------hhhhhhhHHHHHHHHcCCceEeccCccccCCCce
Confidence 1222222222 446799999988 4445555688999888766654433445555544
No 466
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.30 E-value=0.15 Score=48.72 Aligned_cols=75 Identities=11% Similarity=-0.033 Sum_probs=51.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCC
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA 191 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~ 191 (263)
+++|+|+|.|. |--|.+.++.|.+.|++|++.+.+.........+. .. .+..+..+-....+.++|.||.+.|+.
T Consensus 6 ~~~~~v~v~G~-G~sG~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~l-~~-~~~~~~~~~~~~~~~~~d~vV~SpgI~ 80 (468)
T PRK04690 6 LEGRRVALWGW-GREGRAAYRALRAHLPAQALTLFCNAVEAREVGAL-AD-AALLVETEASAQRLAAFDVVVKSPGIS 80 (468)
T ss_pred cCCCEEEEEcc-chhhHHHHHHHHHcCCEEEEEcCCCcccchHHHHH-hh-cCEEEeCCCChHHccCCCEEEECCCCC
Confidence 45789999995 88999999999999999999985433222211121 11 233444443444556799999999864
No 467
>PRK07877 hypothetical protein; Provisional
Probab=95.28 E-value=0.088 Score=52.89 Aligned_cols=101 Identities=18% Similarity=0.113 Sum_probs=64.2
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCccch---------------------hhhhhhcCCCceEE
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRK---------------------DNLVHHFRNPRFEL 168 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~---------------------~~~~~~~~~~~v~~ 168 (263)
..++.++|+|.|. | +|+.++..|+..|. +++++|...=... +.+.++-...+++.
T Consensus 103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~ 180 (722)
T PRK07877 103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV 180 (722)
T ss_pred HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence 3468889999998 7 99999999999994 7888765411100 01111112335666
Q ss_pred EEccccc----cccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCc
Q 024766 169 IRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS 231 (263)
Q Consensus 169 ~~~Dv~~----~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~ 231 (263)
+...+.. ..+.++|+||.|. ++. ..=..+-++|.+.++.+|+-++.
T Consensus 181 ~~~~i~~~n~~~~l~~~DlVvD~~---------D~~--------~~R~~ln~~a~~~~iP~i~~~~~ 230 (722)
T PRK07877 181 FTDGLTEDNVDAFLDGLDVVVEEC---------DSL--------DVKVLLREAARARRIPVLMATSD 230 (722)
T ss_pred EeccCCHHHHHHHhcCCCEEEECC---------CCH--------HHHHHHHHHHHHcCCCEEEEcCC
Confidence 6665543 3456799999998 222 22223456788888888877753
No 468
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.28 E-value=0.067 Score=48.26 Aligned_cols=65 Identities=12% Similarity=0.004 Sum_probs=47.1
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
..+.||++.|.| .|.||+++++.|...|.+|++.+|..... .+... .+-.++.+.+.|+|+.+..
T Consensus 118 ~~L~gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~~~~-----------~~~~~-~~~l~ell~~aDiv~~~lp 182 (303)
T PRK06436 118 KLLYNKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSYVND-----------GISSI-YMEPEDIMKKSDFVLISLP 182 (303)
T ss_pred CCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCccc-----------Ccccc-cCCHHHHHhhCCEEEECCC
Confidence 468899999999 89999999998888899999998753210 01100 1224456677899987774
No 469
>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1. APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.
Probab=95.27 E-value=0.13 Score=48.52 Aligned_cols=115 Identities=11% Similarity=0.118 Sum_probs=69.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccch------------------hh----hhhhcCCCceEEEE
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------DN----LVHHFRNPRFELIR 170 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~~----~~~~~~~~~v~~~~ 170 (263)
++..+|+|.| +|++|.++++-|+..|. +++++|...-... +. +.+.-....++.+.
T Consensus 18 L~~s~VlliG-~gglGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~V~i~~~~ 96 (425)
T cd01493 18 LESAHVCLLN-ATATGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPDVNGSAVE 96 (425)
T ss_pred HhhCeEEEEc-CcHHHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence 5667899998 57799999999999998 7888764411100 00 11111122344444
Q ss_pred cccc------ccccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecCC----CCC
Q 024766 171 HDVV------EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP----LEH 240 (263)
Q Consensus 171 ~Dv~------~~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~~----~~~ 240 (263)
.++. ...+.+.|+||.+.. +.. ....+.+.|.+.++.+|+++|.+.||.. .++
T Consensus 97 e~~~~ll~~~~~f~~~fdiVI~t~~---------~~~--------~~~~L~~~c~~~~iPlI~~~s~G~~G~v~v~~~~h 159 (425)
T cd01493 97 ESPEALLDNDPSFFSQFTVVIATNL---------PES--------TLLRLADVLWSANIPLLYVRSYGLYGYIRIQLKEH 159 (425)
T ss_pred cccchhhhhHHHHhcCCCEEEECCC---------CHH--------HHHHHHHHHHHcCCCEEEEecccCEEEEEEEECCe
Confidence 4332 123456788875431 111 1223557788888899999999999842 244
Q ss_pred CcCCCC
Q 024766 241 PQKETY 246 (263)
Q Consensus 241 ~~~E~~ 246 (263)
.+.|+.
T Consensus 160 ~i~et~ 165 (425)
T cd01493 160 TIVESH 165 (425)
T ss_pred EEEECC
Confidence 455553
No 470
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=95.27 E-value=0.03 Score=49.14 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT 151 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~ 151 (263)
.+.+++|+|++|.+|..++..+...|.+|+++++..+
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~ 175 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEE 175 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 5679999999999999999999999999998887544
No 471
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.23 E-value=0.062 Score=47.95 Aligned_cols=37 Identities=27% Similarity=0.389 Sum_probs=33.6
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN 148 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r 148 (263)
..++||+++|.|.++.+|+.|+..|.++|+.|+++..
T Consensus 154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs 190 (285)
T PRK14189 154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS 190 (285)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC
Confidence 4579999999999999999999999999999988654
No 472
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=95.22 E-value=0.15 Score=47.80 Aligned_cols=35 Identities=37% Similarity=0.436 Sum_probs=30.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccc
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR 153 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~ 153 (263)
+|.|.| .|.+|..++..|++.|++|++++++.+..
T Consensus 2 kI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v 36 (411)
T TIGR03026 2 KIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKV 36 (411)
T ss_pred EEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHH
Confidence 688888 89999999999999999999999875543
No 473
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.18 E-value=0.044 Score=49.91 Aligned_cols=33 Identities=27% Similarity=0.591 Sum_probs=27.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEec
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDN 148 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r 148 (263)
+.+|.|.||+|+-|.+|.+.|+.... ++..+..
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss 35 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISS 35 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeec
Confidence 56899999999999999999999865 7655543
No 474
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.18 E-value=0.066 Score=48.08 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=33.6
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVID 147 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~ 147 (263)
..++||+|.|.|.++.+|..++..|+++|+.|++..
T Consensus 154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~ 189 (296)
T PRK14188 154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH 189 (296)
T ss_pred CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence 357999999999999999999999999999999984
No 475
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=95.17 E-value=0.039 Score=51.21 Aligned_cols=35 Identities=23% Similarity=0.371 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF 149 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~ 149 (263)
..++|.|.||.|.+|..++..|.+.|++|++.+++
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 45789999999999999999999999999999874
No 476
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=95.17 E-value=0.18 Score=45.27 Aligned_cols=70 Identities=19% Similarity=0.157 Sum_probs=44.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccc------------------hhh----hhhhcCCCceEEEEcccc
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGR------------------KDN----LVHHFRNPRFELIRHDVV 174 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~------------------~~~----~~~~~~~~~v~~~~~Dv~ 174 (263)
+|+|.| .|++|.++++.|+..|. ++.++|...-.. .+. +.+.....+++....++.
T Consensus 1 kVlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~ 79 (291)
T cd01488 1 KILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ 79 (291)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence 478888 79999999999999998 777776431100 000 111112335556655554
Q ss_pred c---cccCCCcEEEEcc
Q 024766 175 E---PILLEVDQIYHLA 188 (263)
Q Consensus 175 ~---~~~~~iD~Vi~~A 188 (263)
+ ..+.+.|+||.+.
T Consensus 80 ~~~~~f~~~fdvVi~al 96 (291)
T cd01488 80 DKDEEFYRQFNIIICGL 96 (291)
T ss_pred chhHHHhcCCCEEEECC
Confidence 3 3456799999876
No 477
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.14 E-value=0.061 Score=51.29 Aligned_cols=69 Identities=17% Similarity=0.174 Sum_probs=47.1
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
..+.||+++|.| .|.||+.+++.|...|.+|+++++++....+... ..+... + .++.+.+.|+||.++|
T Consensus 250 ~~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-----~G~~~~--~-leell~~ADIVI~atG 318 (476)
T PTZ00075 250 VMIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAM-----EGYQVV--T-LEDVVETADIFVTATG 318 (476)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-----cCceec--c-HHHHHhcCCEEEECCC
Confidence 357899999999 7899999999999999999998776443322111 112221 1 2334556777777664
No 478
>PRK10637 cysG siroheme synthase; Provisional
Probab=95.14 E-value=0.2 Score=47.78 Aligned_cols=77 Identities=17% Similarity=0.138 Sum_probs=58.9
Q ss_pred CCccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEc
Q 024766 108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHL 187 (263)
Q Consensus 108 ~~~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~ 187 (263)
.|...++++|+|+|.| +|-++..=++.|++.|++|+++.-.. .+++.......++.++.-+.....+.+.+.||-+
T Consensus 4 ~P~~~~l~~~~vlvvG-gG~vA~rk~~~ll~~ga~v~visp~~---~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~a 79 (457)
T PRK10637 4 LPIFCQLRDRDCLLVG-GGDVAERKARLLLDAGARLTVNALAF---IPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAA 79 (457)
T ss_pred eceEEEcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCC---CHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEEC
Confidence 4667788999999999 59999999999999999999986432 2333333345677888877777777888877766
Q ss_pred c
Q 024766 188 A 188 (263)
Q Consensus 188 A 188 (263)
.
T Consensus 80 t 80 (457)
T PRK10637 80 T 80 (457)
T ss_pred C
Confidence 5
No 479
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=95.13 E-value=0.034 Score=50.81 Aligned_cols=38 Identities=16% Similarity=0.092 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT 151 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~ 151 (263)
..+.+|+|+|++|.+|..++..+...|.+|++++++.+
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~ 194 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 194 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 35789999999999999999888888999988876543
No 480
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.12 E-value=0.058 Score=49.30 Aligned_cols=68 Identities=16% Similarity=0.116 Sum_probs=48.8
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
+..+.||+|.|.| .|.||+.+++.|...|.+|++.+|...... ... ..+. .+-.++.+.+.|+|+.+.
T Consensus 145 g~~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~~~---~~~~---~~~l~ell~~aDiV~l~l 212 (333)
T PRK13243 145 GYDVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEA---EKE---LGAE---YRPLEELLRESDFVSLHV 212 (333)
T ss_pred ccCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhh---HHH---cCCE---ecCHHHHHhhCCEEEEeC
Confidence 3468999999999 799999999999999999999887543211 111 0111 122445677899998877
No 481
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=95.06 E-value=0.043 Score=48.23 Aligned_cols=39 Identities=28% Similarity=0.351 Sum_probs=34.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG 152 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~ 152 (263)
..+++++|+|++|.+|..+++.+...|.+|+++++..+.
T Consensus 143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~ 181 (325)
T cd08253 143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEG 181 (325)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 357899999999999999999999999999998876543
No 482
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=95.03 E-value=0.079 Score=47.19 Aligned_cols=64 Identities=14% Similarity=0.262 Sum_probs=43.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEcc
Q 024766 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA 188 (263)
Q Consensus 117 k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~A 188 (263)
++|.|.| .|.+|..++..|++.|++|++.+|+.+....... ..+ ...+..++...+.|+||-+.
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-----~g~--~~~~~~~e~~~~~d~vi~~v 66 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA-----AGA--ETASTAKAVAEQCDVIITML 66 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----CCC--eecCCHHHHHhcCCEEEEeC
Confidence 5789998 7999999999999999999998876543322111 111 11222334456789988876
No 483
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.00 E-value=0.092 Score=46.81 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=34.8
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF 149 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~ 149 (263)
+..++||+++|.|.+..+|+-|+..|.++|+.|+++...
T Consensus 153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~ 191 (282)
T PRK14180 153 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF 191 (282)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCC
Confidence 345789999999999999999999999999999887653
No 484
>TIGR01408 Ube1 ubiquitin-activating enzyme E1. This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.
Probab=94.98 E-value=0.12 Score=53.89 Aligned_cols=106 Identities=14% Similarity=0.150 Sum_probs=67.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC------eEEEEecCCccch------------------hhh----hhhcCCC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD------EVIVIDNFFTGRK------------------DNL----VHHFRNP 164 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~------~V~~l~r~~~~~~------------------~~~----~~~~~~~ 164 (263)
.++..+|+|.| +|+||.++++.|+..|. +++++|...-... +.+ .+.-...
T Consensus 416 kL~~~kVlvvG-aGGlG~e~lknLal~Gv~~~~~G~i~IvD~D~Ve~SNLnRQfLf~~~dIGk~Ka~vaa~~l~~~Np~v 494 (1008)
T TIGR01408 416 KLQNLNIFLVG-CGAIGCEMLKNFALMGVGTGKKGMITVTDPDLIEKSNLNRQFLFRPHHIGKPKSYTAADATLKINPQI 494 (1008)
T ss_pred HHhhCcEEEEC-CChHHHHHHHHHHHhCCCcCCCCeEEEECCCEecccccCcCcCCChhHcCcHHHHHHHHHHHHHCCCC
Confidence 35667899999 79999999999999987 7888764411100 001 1111223
Q ss_pred ceEEEEcccc--------ccccCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCcceecC
Q 024766 165 RFELIRHDVV--------EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236 (263)
Q Consensus 165 ~v~~~~~Dv~--------~~~~~~iD~Vi~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~~vyg~ 236 (263)
+++.+...+. +..+.+.|+|+++. .|+..-..+-+.|...++.+|..++.+.+|.
T Consensus 495 ~I~~~~~~v~~~~e~i~~~~f~~~~dvVi~al-----------------Dn~~aR~~vn~~c~~~~iPli~~gt~G~~G~ 557 (1008)
T TIGR01408 495 KIDAHQNRVGPETETIFNDEFYEKLDVVINAL-----------------DNVEARRYVDSRCLAFLKPLLESGTLGTKGN 557 (1008)
T ss_pred EEEEEEeecChhhhhhhhHHHhhCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEeccCceee
Confidence 4555544432 12346789999976 2333334566778888888888888777774
No 485
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=94.98 E-value=0.09 Score=47.14 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=64.6
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHh-CCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc----cCCCcEEE
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLID-RGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI----LLEVDQIY 185 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~-~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~----~~~iD~Vi 185 (263)
+....|.+++|+||+|.+|+... ++++ .|++|+.+.-..++.+-...+.--..-+++-..|+.... -.++|+.|
T Consensus 146 gqpk~GetvvVSaAaGaVGsvvg-QiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyf 224 (340)
T COG2130 146 GQPKAGETVVVSAAAGAVGSVVG-QIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYF 224 (340)
T ss_pred cCCCCCCEEEEEecccccchHHH-HHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEE
Confidence 34457899999999999998555 5555 799999998655543322221201223344444443332 24699999
Q ss_pred EccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---cCCeEEEEcCcceecCC
Q 024766 186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR---VGAKFLLTSTSEVYGDP 237 (263)
Q Consensus 186 ~~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~iV~vSS~~vyg~~ 237 (263)
-|.|- .+++++.. ...||+.+.-++.|..+
T Consensus 225 eNVGg----------------------~v~DAv~~~ln~~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 225 ENVGG----------------------EVLDAVLPLLNLFARIPVCGAISQYNAP 257 (340)
T ss_pred EcCCc----------------------hHHHHHHHhhccccceeeeeehhhcCCC
Confidence 99862 12333322 12489999999999855
No 486
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.98 E-value=0.09 Score=46.99 Aligned_cols=38 Identities=24% Similarity=0.300 Sum_probs=34.2
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF 149 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~ 149 (263)
..++||+++|.|.+..+|+-|+..|+++|+.|+++...
T Consensus 151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~ 188 (287)
T PRK14173 151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK 188 (287)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC
Confidence 45799999999999999999999999999999887643
No 487
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.98 E-value=0.19 Score=46.77 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=26.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC--CCeEEEEe
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDR--GDEVIVID 147 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~--G~~V~~l~ 147 (263)
+|+|.|.|+||.||...++.+.+. .++|+++.
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLa 34 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALS 34 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHhCccccEEEEEE
Confidence 478999999999999999888765 45777775
No 488
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=94.94 E-value=0.075 Score=37.67 Aligned_cols=35 Identities=37% Similarity=0.584 Sum_probs=30.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccc
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR 153 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~ 153 (263)
+++|.| +|++|.+++..|.+.|.+|+++.+...-.
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAELGKEVTLIERSDRLL 35 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence 477888 79999999999999999999999875543
No 489
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=94.93 E-value=0.068 Score=47.66 Aligned_cols=37 Identities=30% Similarity=0.211 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT 151 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~ 151 (263)
.+.+++|+||+|.+|..+++.+...|.+|++++++.+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~ 179 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDD 179 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5789999999999999999888889999998886544
No 490
>PLN02928 oxidoreductase family protein
Probab=94.91 E-value=0.069 Score=49.08 Aligned_cols=78 Identities=15% Similarity=0.114 Sum_probs=50.1
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhh--cCCCce--EEEEccccccccCCCcEEEE
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRF--ELIRHDVVEPILLEVDQIYH 186 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~v--~~~~~Dv~~~~~~~iD~Vi~ 186 (263)
...+.||++.|.| .|-||+.+++.|...|.+|++.+|............ .....+ .....+-.++.+.+.|+|+.
T Consensus 154 ~~~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl 232 (347)
T PLN02928 154 GDTLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVL 232 (347)
T ss_pred ccCCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEE
Confidence 3468899999999 799999999999999999999987633211100000 000000 00123334566778899988
Q ss_pred ccC
Q 024766 187 LAC 189 (263)
Q Consensus 187 ~Ag 189 (263)
+..
T Consensus 233 ~lP 235 (347)
T PLN02928 233 CCT 235 (347)
T ss_pred CCC
Confidence 774
No 491
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.88 E-value=0.19 Score=49.11 Aligned_cols=65 Identities=23% Similarity=0.252 Sum_probs=49.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccc------cCCCcEEEEcc
Q 024766 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------LLEVDQIYHLA 188 (263)
Q Consensus 118 ~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~------~~~iD~Vi~~A 188 (263)
+++|.| .|-+|+.++++|.++|++|++++.+++..++ . ....+..+.+|.+|+. .++.|.++-+.
T Consensus 419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~-~----~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~ 489 (558)
T PRK10669 419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDE-L----RERGIRAVLGNAANEEIMQLAHLDCARWLLLTI 489 (558)
T ss_pred CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHH-H----HHCCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence 688888 7999999999999999999999976443222 2 2346889999999873 34678776654
No 492
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=94.88 E-value=0.088 Score=49.39 Aligned_cols=68 Identities=18% Similarity=0.147 Sum_probs=47.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccC
Q 024766 113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC 189 (263)
Q Consensus 113 ~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag 189 (263)
.+.|++|+|.| .|.||..++..+...|.+|+++++++....+... ..+.+. ++ ++.+.+.|+||.+.|
T Consensus 192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~-----~G~~v~--~l-eeal~~aDVVItaTG 259 (406)
T TIGR00936 192 LIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAM-----DGFRVM--TM-EEAAKIGDIFITATG 259 (406)
T ss_pred CCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHh-----cCCEeC--CH-HHHHhcCCEEEECCC
Confidence 36899999999 8999999999999999999999877643322211 112222 22 334566788887764
No 493
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.87 E-value=0.1 Score=46.60 Aligned_cols=37 Identities=24% Similarity=0.379 Sum_probs=33.6
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN 148 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r 148 (263)
..++||+|+|.|.+..+|+.++..|+++|+.|.++..
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs 189 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI 189 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC
Confidence 4678999999999999999999999999999988753
No 494
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=94.86 E-value=0.054 Score=48.60 Aligned_cols=37 Identities=22% Similarity=0.127 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT 151 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~ 151 (263)
.+.+|+|+|++|.+|..++..+...|.+|++++++.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~ 174 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDE 174 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5779999999999999999888888999998887644
No 495
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=94.85 E-value=0.23 Score=44.96 Aligned_cols=88 Identities=20% Similarity=0.267 Sum_probs=54.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCccchhhhhhhcCCCceEEEEccccccccCCCcEEEEccCCCCCC
Q 024766 116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPV 194 (263)
Q Consensus 116 ~k~vlVTGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~~~iD~Vi~~Ag~~~~~ 194 (263)
+.+|.|.||||++|.+|++.|.+... ++..+..+... .. +..+..+.++|++|-+....
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~------------~~-----~~~~~~~~~~DvvFlalp~~--- 61 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK------------DA-----AARRELLNAADVAILCLPDD--- 61 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC------------cc-----cCchhhhcCCCEEEECCCHH---
Confidence 35899999999999999999988864 44444332111 00 12223446799999887310
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCc------ceecCCC
Q 024766 195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS------EVYGDPL 238 (263)
Q Consensus 195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~iV~vSS~------~vyg~~~ 238 (263)
-...+...+.+.|+++|=.|+. .+||-+.
T Consensus 62 ---------------~s~~~~~~~~~~g~~VIDlSadfRl~~~~~yglPE 96 (313)
T PRK11863 62 ---------------AAREAVALIDNPATRVIDASTAHRTAPGWVYGFPE 96 (313)
T ss_pred ---------------HHHHHHHHHHhCCCEEEECChhhhcCCCCeEEcCc
Confidence 1123445555667788888875 3566443
No 496
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=94.84 E-value=0.084 Score=48.09 Aligned_cols=73 Identities=23% Similarity=0.186 Sum_probs=44.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--ccchhhhhhhcCCCceEEEEccccc-cccCCCcEEEEccC
Q 024766 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF--TGRKDNLVHHFRNPRFELIRHDVVE-PILLEVDQIYHLAC 189 (263)
Q Consensus 115 ~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~--~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~~~iD~Vi~~Ag 189 (263)
.+.+|+|+|+ |.||...+..+...|++|++++++. +.+.+.+. .++...+.....|+.+ ....++|+||.++|
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g 247 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELGATYVNSSKTPVAEVKLVGEFDLIIEATG 247 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEecCCccchhhhhhcCCCCEEEECcC
Confidence 5789999985 9999999988888899999998742 22222222 2222111111111111 12245899999996
No 497
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=94.83 E-value=0.053 Score=46.45 Aligned_cols=37 Identities=27% Similarity=0.288 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 024766 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT 151 (263)
Q Consensus 114 ~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~~~ 151 (263)
..+.+++|+|+++ +|..+++.+...|.+|++++++.+
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~ 169 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDE 169 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHH
Confidence 3567999999988 999999999999999999887643
No 498
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=94.82 E-value=0.085 Score=48.05 Aligned_cols=39 Identities=23% Similarity=0.322 Sum_probs=35.0
Q ss_pred ccccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 024766 110 VGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF 149 (263)
Q Consensus 110 ~~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~ 149 (263)
.+..+.||++-|.| .|-||+++++.+...|.+|++.++.
T Consensus 136 ~g~el~gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~ 174 (324)
T COG0111 136 RGTELAGKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPY 174 (324)
T ss_pred ccccccCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCC
Confidence 34467899999999 8999999999999999999999883
No 499
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.80 E-value=0.11 Score=46.25 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=33.8
Q ss_pred ccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 024766 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN 148 (263)
Q Consensus 112 ~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r 148 (263)
..++||+++|.|.+..+|+-|+..|.++|+.|+++..
T Consensus 154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs 190 (278)
T PRK14172 154 IDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHS 190 (278)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCC
Confidence 4679999999999999999999999999999988764
No 500
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.80 E-value=0.11 Score=46.44 Aligned_cols=39 Identities=21% Similarity=0.249 Sum_probs=34.8
Q ss_pred cccCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 024766 111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF 149 (263)
Q Consensus 111 ~~~~~~k~vlVTGatG~IG~~l~~~Ll~~G~~V~~l~r~ 149 (263)
...+.||+++|.|.+..+|+-|+..|+++|+.|+++...
T Consensus 154 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~ 192 (284)
T PRK14177 154 GIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK 192 (284)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC
Confidence 346799999999999999999999999999999987643
Done!