BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024770
(262 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/295 (64%), Positives = 216/295 (73%), Gaps = 33/295 (11%)
Query: 1 MAIADRKSASDSKG-WGFFKLPFRQSGNSSNTTSTSSSA--------------------- 38
M + + K SD KG WGFFK+PFR S N S+++++
Sbjct: 1 MTMTEEKPTSDGKGGWGFFKIPFRNSSGHRNAASSAATSPFPSGASSSSTSSHLHNHHQH 60
Query: 39 ---------SHQHQNQSNQQVEGSKTHG--SSSVSSVARSLLPKRRRLKLDPANKLYFPY 87
N + G H S SVSSVA+S LP +RRLKLDP+ KLYFPY
Sbjct: 61 HHQHHHQHHHQLGYNGPHGDGSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFPY 120
Query: 88 EAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESLIATVFKFVELPEN 147
E GKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGE++IATVFKFVE PEN
Sbjct: 121 EPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFKFVEPPEN 180
Query: 148 NEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVVFLNPERPEPALEK 207
NEKPM Q+SR KFKI+S+KVK +DYVPELFDEQKD + EQILRV+FL+PER PALEK
Sbjct: 181 NEKPMDQRSRVKFKIMSLKVKGPMDYVPELFDEQKDDVSKEQILRVIFLDPERSNPALEK 240
Query: 208 LKRQLADADAAVAARKKPPEDTGPRIIGEGLVIDEWKERRERYLARQQVEGVDSV 262
LKRQLA+ADAAV ARKKPPE+TGP++IGEGLVIDEWKERRERYLA+QQ EG DSV
Sbjct: 241 LKRQLAEADAAVEARKKPPEETGPKMIGEGLVIDEWKERRERYLAQQQGEGADSV 295
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 311 bits (798), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/271 (66%), Positives = 214/271 (78%), Gaps = 15/271 (5%)
Query: 1 MAIADRKSASDSKGWGFFKL-PFRQSGNSSNTTSTSSSASHQHQNQSNQQVEGSKTHGSS 59
M I DR++ S K F+L PF Q ST+SS+S Q+ NQ+ + G++ S
Sbjct: 1 MPIGDRQNPSVEKKKNLFRLCPFWQR------RSTTSSSSTQNPNQNYRSRHGNRNTDIS 54
Query: 60 SVS-------SVARSLLPKRRRLKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQ 112
+VS SVARSLLP RRRL+LDP++ LYFPYE GKQVRSAIK+KNTSKSH AFKFQ
Sbjct: 55 AVSKPPLTMSSVARSLLPARRRLRLDPSSYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQ 114
Query: 113 TTAPKSCFMRPPGAILAPGESLIATVFKFVELPENNEK-PMYQKSRDKFKIISMKVKADV 171
TTAPKSC+MRPPG +LAPGES+ ATVFKFVE PENNEK P+ QKS+ KFKI+S+KVK V
Sbjct: 115 TTAPKSCYMRPPGGVLAPGESVFATVFKFVEHPENNEKQPLNQKSKVKFKIMSLKVKPGV 174
Query: 172 DYVPELFDEQKDQTAAEQILRVVFLNPERPEPALEKLKRQLADADAAVAARKKPPEDTGP 231
+YVPELFDEQKDQ A EQ+LRV+F++ +RP ALEKLKRQL +A+AAV ARKKPP +TGP
Sbjct: 175 EYVPELFDEQKDQVAVEQVLRVIFIDADRPSAALEKLKRQLDEAEAAVEARKKPPPETGP 234
Query: 232 RIIGEGLVIDEWKERRERYLARQQVEGVDSV 262
R++GEGLVIDEWKERRE+YLARQQVE VDS+
Sbjct: 235 RVVGEGLVIDEWKERREKYLARQQVESVDSL 265
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 310 bits (794), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 181/287 (63%), Positives = 211/287 (73%), Gaps = 27/287 (9%)
Query: 1 MAIADRKSASDSKGWGFFKLPFRQSGNSSNTTSTSSSAS---------HQHQNQSNQQ-- 49
MA+ + KS SD + WG FKLPFR S + + + S+SSS + H +QN +Q
Sbjct: 1 MALTEDKSDSDGRRWGKFKLPFRNSNSQAPSASSSSSMATSSSSVTSSHLNQNYIHQSRH 60
Query: 50 --------VEG-SKTHGSS-----SVSSVARSLLPKRRRLKLDPANKLYFPYEAGKQVRS 95
VEG + H S S+SSVARSLLP +RRLKLDP+ KLYFPYE GKQVRS
Sbjct: 61 FQYHGPPVVEGLGQNHHQSAATIPSMSSVARSLLPTKRRLKLDPSAKLYFPYEPGKQVRS 120
Query: 96 AIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESLIATVFKFVELPENNEKPMYQK 155
AIKIKNTSKSHVAFKFQTT PKSCFMRP GAILAPGE +IATVFKFVE PENNEKPM QK
Sbjct: 121 AIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKFVEPPENNEKPMEQK 180
Query: 156 SRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVVFLNPERPEPALEKLKRQLADA 215
S KFKI+S+K+K DY+PELF+EQKD + EQ++RVVFL+PE P +EKLK QLA+A
Sbjct: 181 SGVKFKIMSLKMKVPTDYMPELFEEQKDHVSEEQVMRVVFLDPENPNSMMEKLKSQLAEA 240
Query: 216 DAAVAARKKPPED-TGPRIIGEGLVIDEWKERRERYLARQQVEGVDS 261
DAA ARKK E GP+ IGEGLVIDEWK+RRERYLA+QQ GVD+
Sbjct: 241 DAADEARKKASEGIVGPKPIGEGLVIDEWKQRRERYLAQQQ-GGVDA 286
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 81 NKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESLIATVFK 140
++L F +E KQ +K+ N ++++VAFK +TT+PK F+RP ++ P +S I
Sbjct: 15 DELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIR--- 71
Query: 141 FVELPENNEKPMYQKSRDKFKIISMKV--KADVDYVPE-LFDEQKDQTAAEQILRVVFLN 197
V L E P + +DKF + S V DVD +P+ F + +T E L+V ++
Sbjct: 72 -VTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVSYIT 130
Query: 198 P 198
P
Sbjct: 131 P 131
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L ++P + L FP+E KQ+ ++ + N + ++VAFK +TT PK +RP ++ P
Sbjct: 23 LTVEPLD-LQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPR--- 78
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADV---DYVPELFDEQKDQTAAEQIL 191
+T V + E P + +DKF + + V + PE+F ++ E L
Sbjct: 79 -STCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKL 137
Query: 192 RVVFLNPERP 201
RV ++ P RP
Sbjct: 138 RVTYVAPPRP 147
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L +DP + L FP+E KQ+ ++ + N + ++VAFK +TT PK +RP ++ P S
Sbjct: 6 LTIDPVD-LQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRSSS 64
Query: 135 IATVFKFVELPENNEKPMYQKSRDKF---KIISMKVKADVDYVPELFDEQKDQTAAEQIL 191
V + E P + +DKF +++ D E+F ++ E L
Sbjct: 65 EV----LVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKL 120
Query: 192 RVVFLNPERP 201
RVV++ P RP
Sbjct: 121 RVVYVAPPRP 130
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 82 KLYFPYEAGKQVRSAIKIKN-TSKSHVAFKFQTTAPKSCFMRPPGAILAPGESLIATVFK 140
+L FP+E KQ ++++ N T+ VAFK +TT P+ +RP ++ PG+S T
Sbjct: 13 ELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDSCNVT--- 69
Query: 141 FVELPENNEKPMYQKSRDKFKIISMKVKADV---DYVPELFDEQKDQTAAEQILRVVFL- 196
V + E P+ + +DKF + ++ V + + E+F+++ + + LRVV++
Sbjct: 70 -VTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIP 128
Query: 197 -NPERPEP 203
NP P P
Sbjct: 129 ANPPSPVP 136
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 83 LYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESLIATVFKFV 142
L F + KQ +++ NT+ +VAFK +TT+PK +RP ++AP + TV
Sbjct: 13 LQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTCEFTVI--- 69
Query: 143 ELPENNEKPMYQKSRDKFKIISMKVKA---DVDYVPELFDEQKDQTAAEQILRVVFLNP- 198
+ E P +DKF I S V A D D +F + + + E LRV + P
Sbjct: 70 -MQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTLVPPS 128
Query: 199 ERPE 202
+ PE
Sbjct: 129 DSPE 132
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L +DP + + FP E K+V ++ + N ++++VAFK +TT K ++RP ++ P S
Sbjct: 177 LIIDPVD-VQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRSSC 235
Query: 135 IATVFKFVELPENNEKPMYQKSRDKF----KIISMKVKADVDYVPELFDEQKDQTAAEQI 190
V + E P + RDK K++ + A D E+F ++ A E
Sbjct: 236 EVLVI----MQALKEAPADMQCRDKLLFQCKVVEPETTAK-DVTSEMFSKEAGHPAEETR 290
Query: 191 LRVVFLNPERP 201
L+V+++ P +P
Sbjct: 291 LKVMYVTPPQP 301
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 85 FPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESLIATVFKFVEL 144
FP E KQ ++ + N + ++VAFK QTT PK ++P ++ P S V +
Sbjct: 16 FPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPRSSCEV----LVVM 71
Query: 145 PENNEKPMYQKSRDKFKIISMKV----KADVDYVPELFDEQKDQTAAEQILRVVFLNPER 200
E P ++ +DK + KV D + E+F ++ E I +++++ P +
Sbjct: 72 QALKEAPADRQCKDKL-LFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIFKIIYVAPPQ 130
Query: 201 PEPALEKLKRQLADADAAVAARKKPPED-TGP--------RIIGEGLVID 241
P+ +++ + A+V+ + E GP R+ E L+ID
Sbjct: 131 PQSPVQEGLEDGSSPSASVSDKGNASEVFVGPSVGIVDLIRMSDELLIID 180
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS2 PE=1 SV=3
Length = 244
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 99 IKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESLIATVFKFVELPENNEKPMYQ-KSR 157
I N S +AFK +TTAPK +RP A++APGE++ V F+ L E+P K R
Sbjct: 27 ISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVI-FLGL---TEEPAADFKCR 82
Query: 158 DKFKIISMKVKADVD 172
DKF +I++ D++
Sbjct: 83 DKFLVITLPSPYDLN 97
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L LDP L F V + +K++N S V FK +TTAP+ +RP I+ PG ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTV 74
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVV 194
+V L + P +KS+ KF + ++ ++ + ++ E K + LR V
Sbjct: 75 TVSVM----LQPFDYDP-NEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCV 129
Query: 195 FLNP 198
F P
Sbjct: 130 FEMP 133
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS22 PE=1 SV=2
Length = 175
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 82 KLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESLIATVFKF 141
KL F KQ IK++N + V FK +T+AP +RP AI+ ES+ + F
Sbjct: 7 KLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVNVQIV-F 65
Query: 142 VELPENNEKPMYQKSRDKFKIISMKVKADVDYV---------PELFDEQKDQTAAEQI 190
+ LP++ + RDKF I+++ + A V P L ++ KD ++I
Sbjct: 66 LGLPKSTADDEMDQKRDKFLIVTLPIPAAYQNVEDGELLSDWPNLEEQYKDDIVFKKI 123
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L LDP L F V + +K++N S V FK +TTAP+ +RP I+ PG ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTV 74
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVV 194
+V L + P +KS+ KF + ++ + + ++ E K + LR V
Sbjct: 75 TVSVM----LQPFDYDP-NEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCV 129
Query: 195 FLNP 198
F P
Sbjct: 130 FEMP 133
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L LDP L F V + +K++N S V FK +TTAP+ +RP I+ PG ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTV 74
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVV 194
+V L + P +KS+ KF + ++ + + ++ E K + LR V
Sbjct: 75 TVSVM----LQPFDYDP-NEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCV 129
Query: 195 FLNP 198
F P
Sbjct: 130 FEMP 133
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L L+P ++L F V + +K+ N + +V FK +TTAP+ +RP I+ G S+
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASI 67
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVV 194
+V L + P +KS+ KF + SM AD + + E K + + LR V
Sbjct: 68 NVSVM----LQPFDYDP-NEKSKHKFMVQSMFAPADTSDMEAAWKEAKPEDLMDSKLRCV 122
Query: 195 FLNP 198
F P
Sbjct: 123 FELP 126
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L L+P ++L F V + +K+ N + +V FK +TTAP+ +RP I+ G S+
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASI 67
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVV 194
+V L + P +KS+ KF + SM D + ++ E K + + LR V
Sbjct: 68 NVSVM----LQPFDYDP-NEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCV 122
Query: 195 FLNP 198
F P
Sbjct: 123 FELP 126
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L LDP + L F V + +K++N S V FK +TTAP+ +RP I+ PG +
Sbjct: 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIV 74
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVV 194
+V L + P +KS+ KF + ++ ++ + ++ E K + LR V
Sbjct: 75 TVSVM----LQPFDYDP-NEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCV 129
Query: 195 FLNP 198
F P
Sbjct: 130 FEMP 133
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L L+P ++L F V + +K+ N + +V FK +TTAP+ +RP ++ G SL
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGASL 67
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVV 194
+V L + P +KS+ KF + SM D + ++ E K + + LR V
Sbjct: 68 NVSVM----LQPFDYDP-NEKSKHKFMVQSMFAPPDTSDMEAVWKEAKPEDLMDSKLRCV 122
Query: 195 FLNP 198
F P
Sbjct: 123 FELP 126
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L L+P ++L F V + +K+ N + +V FK +TTAP+ +RP I+ G S+
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASI 67
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVV 194
+V L + P +KS+ KF + SM D + ++ E K + + LR V
Sbjct: 68 NVSVM----LQPFDYDP-NEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCV 122
Query: 195 FLNP 198
F P
Sbjct: 123 FELP 126
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L LDP + L F V + +K++N S V FK +TTAP+ +RP ++ PG +
Sbjct: 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIV 74
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVV 194
+V L + P +KS+ KF + ++ ++ + ++ E K + LR V
Sbjct: 75 TVSVM----LQPFDYDP-NEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCV 129
Query: 195 FLNP 198
F P
Sbjct: 130 FEMP 133
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L L+PA +L F V + +K+ N + + FK +TTAPK +RP IL P S+
Sbjct: 8 LILEPAGELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSI 67
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPE----LFDEQKDQTAAEQI 190
V L N P +K++ KF + SM D+V E L+ + ++ +
Sbjct: 68 AVAVM----LQPFNYDP-NEKNKHKFMVQSMYAP---DHVVESQELLWKDAPPESLMDTK 119
Query: 191 LRVVFLNPE 199
LR VF P+
Sbjct: 120 LRCVFEMPD 128
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
+ L+ + + FP + V+ ++++NT+ + FK +TTAPK +RP G + E+
Sbjct: 1 MALECDSTIVFPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRI---EAN 57
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDY--VPELFDEQKDQTAAEQILR 192
A + + P ++E K RDKF + S ++K ++ + +++ + +E+ +R
Sbjct: 58 SAVSVEVILQPLDHEPAPGTKCRDKFLVQSTELKPELQGMDIADIWTQVSKANISERKIR 117
Query: 193 VVF 195
V+
Sbjct: 118 CVY 120
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L L+P ++L F V + +K+ N + +V FK +TT P+ +RP ++ G SL
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGASL 67
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQILRVV 194
+V L + P +KS+ KF + SM D + ++ E K + + LR V
Sbjct: 68 NVSVM----LQPFDYDP-NEKSKHKFMVQSMFAPPDTSDMEAVWKEAKPEDLMDSKLRCV 122
Query: 195 FLNP 198
F P
Sbjct: 123 FELP 126
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L+++P L FP+E KQ+ ++ + N + ++VAFK +TT + +RP ++ P
Sbjct: 7 LEIEPM-YLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILPK--- 62
Query: 135 IATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADV---DYVPELFDEQKDQTAAEQIL 191
+T V + E P +S +KF I S+ V + E+F ++ E L
Sbjct: 63 -STCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETKL 121
Query: 192 RVVFL 196
RV ++
Sbjct: 122 RVTYV 126
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L + PA +LYF + ++ I + N +K+ VAFK +TTAP+ ++P + PG S+
Sbjct: 328 LHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASV 387
Query: 135 IATV 138
V
Sbjct: 388 DIVV 391
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
L + PA +LYF + ++ I + N +K+ VAFK +TTAP+ ++P + PG S+
Sbjct: 328 LHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASI 387
Query: 135 IATV 138
V
Sbjct: 388 DIIV 391
>sp|P53023|MSP3_GLORO Major sperm protein 3 OS=Globodera rostochiensis GN=MSP-3 PE=2 SV=2
Length = 126
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 79 PANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
PA K+ F + ++I N + F F+TT PK M PP +L P ES+
Sbjct: 13 PAQKVVFNAPFDNKATYYVRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKESV 68
>sp|P53021|MSP1_GLORO Major sperm protein 1 OS=Globodera rostochiensis GN=MSP-1 PE=2 SV=2
Length = 126
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 79 PANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
PA K+ F + ++I N + F F+TT PK M PP +L P ES+
Sbjct: 13 PAQKVVFNAPFDNKATYYVRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKESV 68
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2 SV=2
Length = 126
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 79 PANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
P K+ F + +++ N + + F F+TT PK M PP +L P ES+
Sbjct: 13 PNQKVVFNAPFDNKATYYVRVINPGTNRIGFAFKTTKPKRINMNPPNGVLGPKESV 68
>sp|Q21244|MSP63_CAEEL Major sperm protein 63 OS=Caenorhabditis elegans GN=msp-63 PE=2
SV=3
Length = 127
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 75 LKLDPANKLYF--PYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGE 132
++ P K+ F PY+ R IK+ N+S + + +TT K + PP +L P E
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTYR--IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 133 SLIATV----FKFVELPENNEK 150
+++ V F F + NN++
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
+ ++ + +L+F + I + N + V FK +TTAPK +RP + P
Sbjct: 1 MSVECSGELFFYPPFTTMSKELISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPK--- 57
Query: 135 IATVFKFVELPENNEKPMYQ-KSRDKFKIISMKV----KADVDYVPELFDEQKDQ--TAA 187
+TV V L E+P K RDKF I SM + ++V+ E + E + Q +
Sbjct: 58 -STVNVQVLLQAMKEEPAPDFKCRDKFLIQSMAIGDADTSNVENYHEFWTEMEKQGRSIF 116
Query: 188 EQILRVVFLNPERPEPA 204
++ +R V+ + P+ A
Sbjct: 117 DRKIRCVYSTKQPPQSA 133
>sp|Q19832|MSP3_CAEEL Major sperm protein 3 OS=Caenorhabditis elegans GN=msp-3 PE=2 SV=3
Length = 127
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 75 LKLDPANKLYF--PYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGE 132
++ P K+ F PY+ IK+ N+S + + +TT K + PP +L P E
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTYH--IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 133 SLIATV----FKFVELPENNEK 150
+++ V F F + NN++
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|P53017|MSP19_CAEEL Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
OS=Caenorhabditis elegans GN=msp-19 PE=1 SV=2
Length = 127
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 75 LKLDPANKLYF--PYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGE 132
++ P K+ F PY+ IK+ N+S + + +TT K + PP +L P E
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTYH--IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 133 SLIATV----FKFVELPENNEK 150
+++ V F F + NN++
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q9TVW5|MSP77_CAEEL Major sperm protein 77/79 OS=Caenorhabditis elegans GN=msp-77 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 75 LKLDPANKLYF--PYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGE 132
++ P K+ F PY+ IK+ N+S + + +TT K + PP +L P E
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTYH--IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 133 SLIATV----FKFVELPENNEK 150
+++ V F F + NN++
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q94053|MSP78_CAEEL Major sperm protein 78 OS=Caenorhabditis elegans GN=msp-78 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 75 LKLDPANKLYF--PYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGE 132
++ P K+ F PY+ IK+ N+S + + +TT K + PP +L P E
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTYH--IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 133 SLIATV----FKFVELPENNEK 150
+++ V F F + NN++
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q23519|MS152_CAEEL Major sperm protein 152 OS=Caenorhabditis elegans GN=msp-152 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 75 LKLDPANKLYF--PYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGE 132
++ P K+ F PY+ IK+ N+S + + +TT K + PP +L P E
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTYH--IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 133 SLIATV----FKFVELPENNEK 150
+++ V F F + NN++
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q17856|MSP55_CAEEL Major sperm protein 55/57 OS=Caenorhabditis elegans GN=msp-55 PE=2
SV=3
Length = 127
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 75 LKLDPANKLYF--PYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGE 132
++ P K+ F PY+ IK+ N+S + + +TT K + PP +L P E
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTYH--IKVINSSARRIVYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 133 SLIATV----FKFVELPENNEK 150
+++ V F F + NN++
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q8BZB3|CO027_MOUSE Transmembrane protein C15orf27 homolog OS=Mus musculus PE=2 SV=3
Length = 538
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 20 LPFRQSGNSSNTTSTSSSASHQHQNQ-SNQQVEGSKTHGSSSVSSVAR-SLLPKRRR 74
LP + SGNS+ ++TS + SH + Q S+T GSS+ S R LLP + R
Sbjct: 373 LPLKLSGNSTCASATSETTSHSTCGSVTRAQSASSQTLGSSTDCSTPREELLPSKPR 429
>sp|P53018|MSP32_CAEEL Major sperm protein 32 OS=Caenorhabditis elegans GN=msp-32 PE=2
SV=1
Length = 190
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 75 LKLDPANKLYF--PYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGE 132
++ P K+ F PY+ IK+ N+S + + +TT K + PP +L P E
Sbjct: 73 IQTQPGTKIVFNAPYDDKHTYH--IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 130
Query: 133 SLIATV----FKFVELPENNEK 150
+++ V F F + NN++
Sbjct: 131 AVLLAVSCDAFAFGQEDTNNDR 152
>sp|P53019|MSP33_CAEEL Major sperm protein 33 OS=Caenorhabditis elegans GN=msp-33 PE=2
SV=2
Length = 127
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 75 LKLDPANKLYF--PYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGE 132
++ P K+ F PY+ IK+ N+S + + +TT K + PP +L P E
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTYH--IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 133 SLIATV----FKFVELPENNEK 150
++ V F F + NN++
Sbjct: 68 AVFLAVSCDAFAFGQEDTNNDR 89
>sp|P53020|MSP38_CAEEL Major sperm protein 38 OS=Caenorhabditis elegans GN=msp-38 PE=2
SV=2
Length = 127
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 75 LKLDPANKLYFPYEAGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESL 134
++ P K+ F + IK+ N+S + + +TT K + PP + P E++
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTDHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVFDPKEAV 69
Query: 135 IATV----FKFVELPENNEK 150
+ V F F + NN++
Sbjct: 70 LLAVSCDAFAFGQEDTNNDR 89
>sp|Q98KJ4|MIAA_RHILO tRNA dimethylallyltransferase OS=Rhizobium loti (strain MAFF303099)
GN=miaA PE=3 SV=1
Length = 321
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 132 ESLIATVFKFVELPENNEKPMYQKSRDKFKIISMKVKADVDYVPELFDEQKDQTAAEQIL 191
E L A+ +E +P+ + +F +I A VD + FD+ D+ A E++
Sbjct: 179 EVLDASGRSILEWQAERGRPLIDRQTARFLVIEPDRAALVDRIERRFDQMLDKGALEEVR 238
Query: 192 RVVFLNPERPEPALEKLKRQLADADAAVAARKKPPE 227
++ L + PA++ + + D AA+A + PE
Sbjct: 239 QLAALGLDPDLPAMKAIG--VRDLQAAMAGQLSFPE 272
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,555,166
Number of Sequences: 539616
Number of extensions: 3803841
Number of successful extensions: 14230
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 13411
Number of HSP's gapped (non-prelim): 737
length of query: 262
length of database: 191,569,459
effective HSP length: 115
effective length of query: 147
effective length of database: 129,513,619
effective search space: 19038501993
effective search space used: 19038501993
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)