Query 024775
Match_columns 262
No_of_seqs 173 out of 1630
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 14:13:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024775.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024775hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dup_A Quinone oxidoreductase; 100.0 1.5E-36 5.3E-41 276.2 21.8 176 75-261 20-196 (353)
2 4eye_A Probable oxidoreductase 100.0 5.1E-36 1.8E-40 271.6 20.6 172 78-261 16-188 (342)
3 3uog_A Alcohol dehydrogenase; 100.0 5.8E-36 2E-40 273.4 21.0 186 72-261 16-217 (363)
4 3gaz_A Alcohol dehydrogenase s 100.0 1.4E-35 4.6E-40 269.0 21.2 175 80-261 4-179 (343)
5 3qwb_A Probable quinone oxidor 100.0 1.4E-35 4.7E-40 267.6 20.7 170 78-261 3-177 (334)
6 3tqh_A Quinone oxidoreductase; 100.0 7.8E-36 2.7E-40 268.0 18.9 174 82-261 5-181 (321)
7 3goh_A Alcohol dehydrogenase, 100.0 1.8E-35 6.1E-40 264.9 21.1 168 82-261 3-170 (315)
8 3gms_A Putative NADPH:quinone 100.0 1.6E-35 5.6E-40 267.9 19.4 171 80-261 1-173 (340)
9 1zsy_A Mitochondrial 2-enoyl t 100.0 2.4E-35 8.3E-40 268.6 20.4 173 79-261 22-196 (357)
10 3two_A Mannitol dehydrogenase; 100.0 5.4E-35 1.8E-39 265.3 21.0 176 80-261 1-204 (348)
11 2j8z_A Quinone oxidoreductase; 100.0 6.7E-35 2.3E-39 265.5 21.1 172 79-261 18-191 (354)
12 3gqv_A Enoyl reductase; medium 100.0 1.3E-34 4.6E-39 265.2 22.9 175 78-261 6-193 (371)
13 1piw_A Hypothetical zinc-type 100.0 6.7E-35 2.3E-39 265.9 20.2 178 78-261 1-207 (360)
14 1yb5_A Quinone oxidoreductase; 100.0 1.5E-34 5.1E-39 263.1 21.9 173 79-261 25-199 (351)
15 4a27_A Synaptic vesicle membra 100.0 9.6E-35 3.3E-39 263.9 20.1 169 82-261 2-172 (349)
16 3jyn_A Quinone oxidoreductase; 100.0 1E-34 3.5E-39 261.1 19.7 168 83-261 1-169 (325)
17 3s2e_A Zinc-containing alcohol 100.0 1.7E-34 5.8E-39 261.1 20.9 174 83-261 2-194 (340)
18 3uko_A Alcohol dehydrogenase c 100.0 2.8E-34 9.4E-39 263.5 21.6 177 79-261 4-222 (378)
19 2hcy_A Alcohol dehydrogenase 1 100.0 3.4E-34 1.2E-38 259.9 21.9 178 80-261 2-198 (347)
20 4ej6_A Putative zinc-binding d 100.0 2.9E-34 9.9E-39 262.9 20.3 174 79-261 19-211 (370)
21 3fbg_A Putative arginate lyase 100.0 4.1E-34 1.4E-38 259.4 20.5 168 83-261 2-179 (346)
22 3m6i_A L-arabinitol 4-dehydrog 100.0 3.3E-34 1.1E-38 261.4 19.6 174 79-259 4-205 (363)
23 2vn8_A Reticulon-4-interacting 100.0 6.5E-34 2.2E-38 260.7 21.3 176 79-261 17-212 (375)
24 3pi7_A NADH oxidoreductase; gr 100.0 7.6E-35 2.6E-39 264.4 14.0 175 78-261 5-193 (349)
25 1qor_A Quinone oxidoreductase; 100.0 8.4E-34 2.9E-38 255.1 19.4 168 83-261 1-169 (327)
26 1h2b_A Alcohol dehydrogenase; 100.0 1E-33 3.6E-38 258.1 20.2 178 80-261 12-215 (359)
27 4dvj_A Putative zinc-dependent 100.0 6.3E-34 2.1E-38 260.1 18.4 173 80-261 19-201 (363)
28 1gu7_A Enoyl-[acyl-carrier-pro 100.0 6.3E-34 2.2E-38 259.4 18.3 171 81-261 1-196 (364)
29 1p0f_A NADP-dependent alcohol 100.0 2.1E-33 7.1E-38 257.1 21.7 175 79-261 5-220 (373)
30 2eih_A Alcohol dehydrogenase; 100.0 1.1E-33 3.8E-38 256.2 19.6 176 84-261 1-195 (343)
31 2fzw_A Alcohol dehydrogenase c 100.0 2.2E-33 7.4E-38 256.8 21.5 177 79-261 2-219 (373)
32 1e3j_A NADP(H)-dependent ketos 100.0 1.8E-33 6.2E-38 255.6 20.1 176 80-261 1-196 (352)
33 3jv7_A ADH-A; dehydrogenase, n 100.0 2.3E-33 7.8E-38 254.2 20.6 173 84-261 1-200 (345)
34 4eez_A Alcohol dehydrogenase 1 100.0 3.6E-33 1.2E-37 252.6 20.9 172 84-261 1-192 (348)
35 2d8a_A PH0655, probable L-thre 100.0 1.2E-33 4E-38 256.5 17.6 175 81-261 2-196 (348)
36 2cf5_A Atccad5, CAD, cinnamyl 100.0 5.5E-33 1.9E-37 253.1 21.9 177 79-261 5-208 (357)
37 1e3i_A Alcohol dehydrogenase, 100.0 4.1E-33 1.4E-37 255.4 21.1 175 80-261 5-224 (376)
38 1f8f_A Benzyl alcohol dehydrog 100.0 2.6E-33 8.9E-38 256.2 19.7 174 80-261 3-219 (371)
39 3fpc_A NADP-dependent alcohol 100.0 2.9E-33 9.8E-38 254.3 19.7 170 84-261 1-195 (352)
40 1wly_A CAAR, 2-haloacrylate re 100.0 1.4E-33 4.8E-38 254.4 17.3 169 84-261 2-174 (333)
41 1rjw_A ADH-HT, alcohol dehydro 100.0 4.4E-33 1.5E-37 252.0 20.6 173 84-261 1-192 (339)
42 2jhf_A Alcohol dehydrogenase E 100.0 6.2E-33 2.1E-37 254.0 21.7 175 80-261 5-220 (374)
43 3nx4_A Putative oxidoreductase 100.0 2.5E-33 8.5E-38 251.5 18.6 171 84-261 1-175 (324)
44 1cdo_A Alcohol dehydrogenase; 100.0 4.6E-33 1.6E-37 254.9 19.9 175 80-261 5-221 (374)
45 1uuf_A YAHK, zinc-type alcohol 100.0 9.2E-33 3.1E-37 253.0 20.6 175 81-261 20-222 (369)
46 4a2c_A Galactitol-1-phosphate 100.0 1.4E-32 4.9E-37 248.5 21.5 168 84-260 1-187 (346)
47 4a0s_A Octenoyl-COA reductase/ 100.0 4E-33 1.4E-37 261.0 18.0 181 79-261 20-249 (447)
48 2c0c_A Zinc binding alcohol de 100.0 8.8E-33 3E-37 252.3 19.0 169 79-261 19-192 (362)
49 3krt_A Crotonyl COA reductase; 100.0 8.6E-33 2.9E-37 259.6 18.5 183 78-261 25-257 (456)
50 1pl8_A Human sorbitol dehydrog 100.0 1E-32 3.6E-37 251.1 18.3 173 83-261 7-200 (356)
51 2h6e_A ADH-4, D-arabinose 1-de 100.0 2E-32 6.8E-37 248.0 19.8 173 82-261 2-200 (344)
52 2dq4_A L-threonine 3-dehydroge 100.0 1.3E-32 4.4E-37 249.2 18.4 172 84-261 1-193 (343)
53 1yqd_A Sinapyl alcohol dehydro 100.0 3.5E-32 1.2E-36 248.6 20.7 174 84-261 15-215 (366)
54 1tt7_A YHFP; alcohol dehydroge 100.0 1.1E-32 3.7E-37 248.2 16.9 175 80-261 1-179 (330)
55 1vj0_A Alcohol dehydrogenase, 100.0 5.9E-32 2E-36 248.3 20.2 175 79-261 13-224 (380)
56 1jvb_A NAD(H)-dependent alcoho 100.0 6.2E-32 2.1E-36 245.0 19.9 174 84-261 1-200 (347)
57 2dph_A Formaldehyde dismutase; 100.0 4.1E-32 1.4E-36 250.7 18.5 171 83-261 2-214 (398)
58 1xa0_A Putative NADPH dependen 100.0 7.2E-32 2.5E-36 242.6 18.5 173 82-261 2-178 (328)
59 1kol_A Formaldehyde dehydrogen 100.0 7.1E-32 2.4E-36 248.9 18.3 170 83-260 2-213 (398)
60 3ip1_A Alcohol dehydrogenase, 100.0 2.5E-31 8.4E-36 246.0 18.3 177 80-261 27-242 (404)
61 2b5w_A Glucose dehydrogenase; 100.0 1.3E-31 4.5E-36 243.9 14.9 168 84-261 1-203 (357)
62 4b7c_A Probable oxidoreductase 100.0 9E-31 3.1E-35 236.1 19.7 163 81-261 5-178 (336)
63 3iup_A Putative NADPH:quinone 100.0 1.1E-31 3.9E-36 246.4 14.0 168 80-261 4-200 (379)
64 2zb4_A Prostaglandin reductase 100.0 1.1E-30 3.7E-35 237.6 18.1 168 79-261 4-190 (357)
65 1iz0_A Quinone oxidoreductase; 100.0 1.1E-29 3.7E-34 226.0 18.0 153 84-261 1-154 (302)
66 3slk_A Polyketide synthase ext 100.0 6.1E-30 2.1E-34 254.8 16.6 193 42-261 179-374 (795)
67 2cdc_A Glucose dehydrogenase g 100.0 7.1E-30 2.4E-34 233.2 14.6 167 84-261 1-208 (366)
68 1v3u_A Leukotriene B4 12- hydr 100.0 7.4E-28 2.5E-32 216.8 20.5 160 81-261 5-174 (333)
69 2j3h_A NADP-dependent oxidored 100.0 6.2E-28 2.1E-32 218.1 16.7 168 80-261 1-184 (345)
70 2vz8_A Fatty acid synthase; tr 99.8 4.4E-20 1.5E-24 201.3 14.3 155 87-261 1533-1696(2512)
71 1pqw_A Polyketide synthase; ro 99.0 3.5E-10 1.2E-14 93.5 4.6 65 197-261 2-67 (198)
72 1gpj_A Glutamyl-tRNA reductase 97.3 1.8E-07 6.1E-12 86.2 -15.4 115 144-260 75-194 (404)
73 3ce6_A Adenosylhomocysteinase; 93.8 0.051 1.8E-06 51.0 4.6 44 217-261 256-301 (494)
74 2yvl_A TRMI protein, hypotheti 93.5 0.18 6.3E-06 41.6 7.2 38 221-261 80-117 (248)
75 1l7d_A Nicotinamide nucleotide 91.6 0.12 4.2E-06 46.6 3.8 29 232-261 171-199 (384)
76 1pjc_A Protein (L-alanine dehy 91.3 0.14 4.9E-06 45.7 3.8 29 232-261 166-194 (361)
77 1x13_A NAD(P) transhydrogenase 91.2 0.14 4.8E-06 46.6 3.8 29 232-261 171-199 (401)
78 3oj0_A Glutr, glutamyl-tRNA re 90.8 0.046 1.6E-06 41.9 0.1 40 220-260 8-47 (144)
79 2vhw_A Alanine dehydrogenase; 90.4 0.19 6.5E-06 45.3 3.8 29 232-261 167-195 (377)
80 1xg5_A ARPG836; short chain de 89.8 0.25 8.5E-06 41.9 3.9 30 232-261 31-60 (279)
81 2eez_A Alanine dehydrogenase; 89.8 0.24 8E-06 44.4 3.8 29 232-261 165-193 (369)
82 3uf0_A Short-chain dehydrogena 89.1 0.29 1E-05 41.7 3.8 31 231-261 29-59 (273)
83 3ijr_A Oxidoreductase, short c 89.1 0.29 1E-05 42.0 3.8 30 232-261 46-75 (291)
84 3tjr_A Short chain dehydrogena 89.0 0.3 1E-05 42.2 3.8 31 231-261 29-59 (301)
85 3r1i_A Short-chain type dehydr 88.7 0.33 1.1E-05 41.4 3.9 30 232-261 31-60 (276)
86 3v2g_A 3-oxoacyl-[acyl-carrier 88.6 0.33 1.1E-05 41.3 3.8 31 231-261 29-59 (271)
87 4imr_A 3-oxoacyl-(acyl-carrier 88.2 0.29 9.9E-06 41.7 3.1 30 232-261 32-61 (275)
88 1o54_A SAM-dependent O-methylt 88.1 0.63 2.2E-05 39.4 5.3 37 223-261 103-141 (277)
89 3r3s_A Oxidoreductase; structu 88.1 0.37 1.3E-05 41.4 3.8 30 232-261 48-77 (294)
90 1yb1_A 17-beta-hydroxysteroid 88.1 0.38 1.3E-05 40.7 3.8 30 232-261 30-59 (272)
91 4dry_A 3-oxoacyl-[acyl-carrier 88.1 0.26 9.1E-06 42.1 2.9 31 231-261 31-61 (281)
92 4dio_A NAD(P) transhydrogenase 87.9 0.37 1.3E-05 44.0 3.8 29 232-261 189-217 (405)
93 1lu9_A Methylene tetrahydromet 87.8 0.4 1.4E-05 41.1 3.9 31 231-261 117-147 (287)
94 3cxt_A Dehydrogenase with diff 87.8 0.4 1.4E-05 41.2 3.9 30 232-261 33-62 (291)
95 3rih_A Short chain dehydrogena 87.6 0.32 1.1E-05 42.0 3.1 30 232-261 40-69 (293)
96 3p2y_A Alanine dehydrogenase/p 87.6 0.38 1.3E-05 43.6 3.6 29 232-261 183-211 (381)
97 3oec_A Carveol dehydrogenase ( 87.3 0.36 1.2E-05 42.0 3.3 31 231-261 44-74 (317)
98 3ngx_A Bifunctional protein fo 87.0 0.81 2.8E-05 39.5 5.2 48 213-261 131-178 (276)
99 3l07_A Bifunctional protein fo 86.9 0.91 3.1E-05 39.4 5.5 49 213-261 140-189 (285)
100 3kvo_A Hydroxysteroid dehydrog 86.7 0.44 1.5E-05 42.3 3.5 30 232-261 44-73 (346)
101 4a5o_A Bifunctional protein fo 86.4 0.98 3.3E-05 39.2 5.4 49 213-261 140-189 (286)
102 1c1d_A L-phenylalanine dehydro 86.3 1.1 3.8E-05 40.1 6.0 35 226-261 166-202 (355)
103 2c07_A 3-oxoacyl-(acyl-carrier 86.3 0.4 1.4E-05 40.9 2.9 30 232-261 43-72 (285)
104 3gvp_A Adenosylhomocysteinase 86.1 0.92 3.2E-05 41.7 5.4 41 220-261 205-247 (435)
105 3p2o_A Bifunctional protein fo 85.9 1.1 3.8E-05 38.8 5.6 48 214-261 140-188 (285)
106 2qhx_A Pteridine reductase 1; 85.5 0.49 1.7E-05 41.5 3.2 30 232-261 45-74 (328)
107 4a26_A Putative C-1-tetrahydro 85.4 1.1 3.8E-05 39.1 5.4 48 214-261 145-193 (300)
108 3ctm_A Carbonyl reductase; alc 85.1 0.44 1.5E-05 40.3 2.6 30 232-261 33-62 (279)
109 3nx6_A 10KDA chaperonin; bacte 85.1 1.4 4.8E-05 31.7 4.9 24 150-173 36-68 (95)
110 3d4o_A Dipicolinate synthase s 84.9 0.67 2.3E-05 39.9 3.7 30 231-261 153-182 (293)
111 3n58_A Adenosylhomocysteinase; 83.4 0.81 2.8E-05 42.3 3.7 40 221-261 233-274 (464)
112 3ond_A Adenosylhomocysteinase; 83.0 0.85 2.9E-05 42.6 3.7 30 231-261 263-292 (488)
113 1a4i_A Methylenetetrahydrofola 82.2 1.8 6.2E-05 37.8 5.3 49 213-261 144-193 (301)
114 2rir_A Dipicolinate synthase, 82.2 0.98 3.4E-05 39.0 3.7 30 231-261 155-184 (300)
115 3s8m_A Enoyl-ACP reductase; ro 82.1 1 3.4E-05 41.3 3.8 34 228-261 55-90 (422)
116 1b0a_A Protein (fold bifunctio 82.0 1.8 6.2E-05 37.5 5.2 49 213-261 138-187 (288)
117 3rku_A Oxidoreductase YMR226C; 81.3 0.91 3.1E-05 38.9 3.1 27 232-258 32-58 (287)
118 3grk_A Enoyl-(acyl-carrier-pro 81.2 1.1 3.6E-05 38.5 3.5 33 229-261 27-61 (293)
119 1nyt_A Shikimate 5-dehydrogena 80.8 2 6.7E-05 36.5 5.0 29 232-261 118-146 (271)
120 2fr1_A Erythromycin synthase, 80.3 1.4 4.8E-05 40.9 4.2 31 229-259 222-252 (486)
121 3zu3_A Putative reductase YPO4 79.8 1.4 4.7E-05 40.2 3.9 33 229-261 42-76 (405)
122 2x6t_A ADP-L-glycero-D-manno-h 79.8 1.1 3.8E-05 39.1 3.2 30 232-261 45-75 (357)
123 3qp9_A Type I polyketide synth 79.7 1.2 4E-05 41.9 3.5 31 229-259 247-277 (525)
124 3u0b_A Oxidoreductase, short c 79.7 1.1 3.8E-05 41.2 3.3 30 232-261 212-241 (454)
125 2q1s_A Putative nucleotide sug 79.4 1.4 4.8E-05 38.8 3.8 30 232-261 31-61 (377)
126 3tnl_A Shikimate dehydrogenase 78.4 2.6 9E-05 36.9 5.1 37 223-260 143-181 (315)
127 1we3_O CPN10(groes); chaperoni 77.6 2.3 8E-05 30.8 3.8 47 151-201 42-97 (100)
128 2z5l_A Tylkr1, tylactone synth 77.6 1.8 6.3E-05 40.4 4.1 30 230-259 256-285 (511)
129 3fpf_A Mtnas, putative unchara 77.5 0.96 3.3E-05 39.5 2.0 34 227-261 117-150 (298)
130 1g31_A GP31; chaperone, CO-cha 77.3 3.9 0.00013 30.2 5.0 24 150-173 47-72 (111)
131 3nzo_A UDP-N-acetylglucosamine 77.1 1.5 5.2E-05 39.3 3.3 29 232-260 34-63 (399)
132 4ggo_A Trans-2-enoyl-COA reduc 76.7 2 6.9E-05 39.0 3.9 31 230-260 47-78 (401)
133 1p3h_A 10 kDa chaperonin; beta 76.4 4.7 0.00016 29.1 5.1 48 150-201 38-95 (99)
134 2c2x_A Methylenetetrahydrofola 75.9 2.9 9.8E-05 36.1 4.5 49 213-261 137-188 (281)
135 4dqv_A Probable peptide synthe 75.6 2 6.8E-05 39.5 3.7 32 230-261 70-104 (478)
136 3oh8_A Nucleoside-diphosphate 75.5 2.1 7.2E-05 39.8 3.9 29 233-261 147-175 (516)
137 3h9u_A Adenosylhomocysteinase; 74.6 2.2 7.7E-05 39.1 3.7 40 221-261 197-238 (436)
138 2et6_A (3R)-hydroxyacyl-COA de 74.3 1.9 6.5E-05 41.2 3.3 30 232-261 321-350 (604)
139 4f6c_A AUSA reductase domain p 74.2 1.2 4.1E-05 40.1 1.8 31 231-261 67-97 (427)
140 1edz_A 5,10-methylenetetrahydr 74.1 4.1 0.00014 35.8 5.2 49 213-261 147-205 (320)
141 4eue_A Putative reductase CA_C 73.6 2.2 7.5E-05 38.9 3.4 33 228-260 55-89 (418)
142 3t4e_A Quinate/shikimate dehyd 73.3 4.4 0.00015 35.4 5.2 34 224-258 138-172 (312)
143 1pcq_O Groes protein; chaperon 73.0 6.1 0.00021 28.4 5.0 49 150-201 36-93 (97)
144 3c85_A Putative glutathione-re 72.7 2.4 8.4E-05 33.2 3.1 28 232-260 38-66 (183)
145 3mje_A AMPHB; rossmann fold, o 72.2 3.2 0.00011 38.7 4.3 30 230-259 234-265 (496)
146 1leh_A Leucine dehydrogenase; 71.9 2.9 9.9E-05 37.4 3.7 31 230-261 170-200 (364)
147 1p77_A Shikimate 5-dehydrogena 70.9 3.8 0.00013 34.7 4.2 37 224-261 109-146 (272)
148 1gtm_A Glutamate dehydrogenase 70.1 7.1 0.00024 35.6 6.0 29 232-261 211-240 (419)
149 3fbt_A Chorismate mutase and s 69.7 4.6 0.00016 34.7 4.4 37 223-260 111-149 (282)
150 3o8q_A Shikimate 5-dehydrogena 69.7 5.4 0.00019 34.2 4.9 36 224-260 116-153 (281)
151 1wwk_A Phosphoglycerate dehydr 69.4 3.6 0.00012 35.7 3.7 29 232-261 141-169 (307)
152 1xdw_A NAD+-dependent (R)-2-hy 69.2 3 0.0001 36.6 3.2 29 232-261 145-173 (331)
153 1dxy_A D-2-hydroxyisocaproate 69.2 3 0.0001 36.7 3.2 29 232-261 144-172 (333)
154 2ekl_A D-3-phosphoglycerate de 69.1 3.7 0.00013 35.8 3.7 29 232-261 141-169 (313)
155 1npy_A Hypothetical shikimate 69.1 4.4 0.00015 34.5 4.2 33 225-258 111-143 (271)
156 2qrj_A Saccharopine dehydrogen 68.5 4 0.00014 36.9 3.9 27 232-258 213-239 (394)
157 3don_A Shikimate dehydrogenase 68.3 4.2 0.00014 34.9 3.8 36 224-260 107-144 (277)
158 4e4t_A Phosphoribosylaminoimid 67.4 4.4 0.00015 36.7 4.0 32 229-261 31-62 (419)
159 3evt_A Phosphoglycerate dehydr 67.2 4.2 0.00014 35.7 3.7 29 232-261 136-164 (324)
160 3gg9_A D-3-phosphoglycerate de 67.2 4.2 0.00014 36.2 3.7 29 232-261 159-187 (352)
161 3jyo_A Quinate/shikimate dehyd 67.1 4.4 0.00015 34.8 3.7 28 231-259 125-152 (283)
162 2egg_A AROE, shikimate 5-dehyd 66.6 4 0.00014 35.2 3.4 29 231-260 139-168 (297)
163 1j4a_A D-LDH, D-lactate dehydr 66.4 3.8 0.00013 36.0 3.2 29 232-261 145-173 (333)
164 3phh_A Shikimate dehydrogenase 66.3 4.5 0.00015 34.6 3.6 27 233-260 118-144 (269)
165 2g76_A 3-PGDH, D-3-phosphoglyc 66.2 4 0.00014 36.0 3.4 29 232-261 164-192 (335)
166 3gvx_A Glycerate dehydrogenase 65.8 4.5 0.00016 34.9 3.6 29 232-261 121-149 (290)
167 2cuk_A Glycerate dehydrogenase 65.4 4.8 0.00017 35.0 3.7 29 232-261 143-171 (311)
168 1v8b_A Adenosylhomocysteinase; 65.2 4.4 0.00015 37.7 3.5 31 230-261 254-284 (479)
169 1gdh_A D-glycerate dehydrogena 64.7 4.5 0.00015 35.3 3.4 29 232-261 145-173 (320)
170 3tum_A Shikimate dehydrogenase 64.0 11 0.00037 32.1 5.6 36 223-259 114-150 (269)
171 3d64_A Adenosylhomocysteinase; 64.0 4.5 0.00015 37.7 3.4 31 230-261 274-304 (494)
172 3pp8_A Glyoxylate/hydroxypyruv 64.0 4.4 0.00015 35.4 3.2 29 232-261 138-166 (315)
173 3hg7_A D-isomer specific 2-hyd 63.8 5.4 0.00019 35.0 3.7 29 232-261 139-167 (324)
174 2yq5_A D-isomer specific 2-hyd 63.5 4.6 0.00016 35.8 3.2 29 232-261 147-175 (343)
175 3kb6_A D-lactate dehydrogenase 63.3 4.7 0.00016 35.5 3.2 29 232-261 140-168 (334)
176 3pwz_A Shikimate dehydrogenase 63.2 5.7 0.00019 33.9 3.7 28 232-260 119-147 (272)
177 4fcc_A Glutamate dehydrogenase 63.1 12 0.00041 34.4 6.0 30 231-261 233-262 (450)
178 2pi1_A D-lactate dehydrogenase 62.7 4.9 0.00017 35.4 3.2 29 232-261 140-168 (334)
179 4g2n_A D-isomer specific 2-hyd 62.3 5.1 0.00017 35.5 3.3 29 232-261 172-200 (345)
180 3grz_A L11 mtase, ribosomal pr 61.3 4.8 0.00017 31.8 2.8 62 187-255 17-81 (205)
181 3aoe_E Glutamate dehydrogenase 61.2 14 0.00048 33.6 6.1 29 232-261 217-245 (419)
182 4hy3_A Phosphoglycerate oxidor 60.9 4.5 0.00015 36.2 2.7 29 232-261 175-203 (365)
183 3njr_A Precorrin-6Y methylase; 60.9 8.2 0.00028 30.9 4.1 35 224-261 47-81 (204)
184 4e5n_A Thermostable phosphite 60.6 4.1 0.00014 35.8 2.4 29 232-261 144-172 (330)
185 2j6i_A Formate dehydrogenase; 60.6 5.7 0.00019 35.4 3.3 29 232-261 163-192 (364)
186 3mw9_A GDH 1, glutamate dehydr 60.3 10 0.00035 35.3 5.0 29 232-261 243-271 (501)
187 1mx3_A CTBP1, C-terminal bindi 60.3 6 0.00021 35.0 3.4 29 232-261 167-195 (347)
188 1qp8_A Formate dehydrogenase; 60.0 6.5 0.00022 34.0 3.5 29 232-261 123-151 (303)
189 2d0i_A Dehydrogenase; structur 59.6 5.9 0.0002 34.7 3.2 29 232-261 145-173 (333)
190 1jg1_A PIMT;, protein-L-isoasp 59.5 7.3 0.00025 31.7 3.6 35 224-260 83-117 (235)
191 2dbq_A Glyoxylate reductase; D 59.3 7.2 0.00025 34.2 3.7 29 232-261 149-177 (334)
192 3r3j_A Glutamate dehydrogenase 58.7 16 0.00056 33.6 6.1 29 232-261 238-266 (456)
193 3jtm_A Formate dehydrogenase, 58.6 6.3 0.00022 35.0 3.2 29 232-261 163-191 (351)
194 1z7e_A Protein aRNA; rossmann 58.4 5.3 0.00018 38.2 2.9 30 232-261 314-344 (660)
195 2o7s_A DHQ-SDH PR, bifunctiona 58.0 5.6 0.00019 37.1 2.9 29 232-261 363-391 (523)
196 3aog_A Glutamate dehydrogenase 57.8 17 0.00059 33.3 6.1 29 232-261 234-262 (440)
197 2bma_A Glutamate dehydrogenase 57.8 14 0.00049 34.1 5.5 29 232-261 251-279 (470)
198 2nac_A NAD-dependent formate d 57.7 6.6 0.00022 35.5 3.2 29 232-261 190-218 (393)
199 3hem_A Cyclopropane-fatty-acyl 57.7 8 0.00027 32.7 3.7 35 225-261 65-99 (302)
200 2fk8_A Methoxy mycolic acid sy 57.4 6.7 0.00023 33.4 3.2 34 226-261 84-117 (318)
201 2a9f_A Putative malic enzyme ( 57.1 16 0.00054 33.0 5.6 43 217-260 171-215 (398)
202 3k5p_A D-3-phosphoglycerate de 57.1 8.1 0.00028 35.2 3.7 29 232-261 155-183 (416)
203 4dgs_A Dehydrogenase; structur 56.9 7.5 0.00026 34.4 3.4 29 232-261 170-198 (340)
204 3u62_A Shikimate dehydrogenase 56.4 7.4 0.00025 32.7 3.2 27 232-260 108-135 (253)
205 2gcg_A Glyoxylate reductase/hy 56.2 7.6 0.00026 33.9 3.3 29 232-261 154-182 (330)
206 2yxe_A Protein-L-isoaspartate 55.7 11 0.00038 29.8 4.1 36 224-261 69-106 (215)
207 3oet_A Erythronate-4-phosphate 55.7 7.7 0.00026 34.9 3.3 30 231-261 117-146 (381)
208 2dvm_A Malic enzyme, 439AA lon 55.4 13 0.00043 34.1 4.8 26 232-258 185-210 (439)
209 2o4c_A Erythronate-4-phosphate 55.4 7.8 0.00027 34.8 3.3 31 230-261 113-143 (380)
210 3k92_A NAD-GDH, NAD-specific g 55.3 17 0.00057 33.2 5.5 29 232-261 220-248 (424)
211 2yfq_A Padgh, NAD-GDH, NAD-spe 55.1 15 0.0005 33.6 5.1 35 226-261 204-239 (421)
212 1nvt_A Shikimate 5'-dehydrogen 55.0 6.5 0.00022 33.5 2.6 28 232-261 127-154 (287)
213 3ba1_A HPPR, hydroxyphenylpyru 54.5 7.9 0.00027 34.0 3.2 29 232-261 163-191 (333)
214 2uv9_A Fatty acid synthase alp 54.5 8.3 0.00028 41.7 3.8 30 232-261 651-681 (1878)
215 2w2k_A D-mandelate dehydrogena 54.2 8.7 0.0003 33.9 3.4 30 231-261 161-191 (348)
216 1sc6_A PGDH, D-3-phosphoglycer 53.9 9.7 0.00033 34.4 3.7 29 232-261 144-172 (404)
217 3slk_A Polyketide synthase ext 53.8 9.4 0.00032 37.6 3.9 30 230-259 527-557 (795)
218 1vl6_A Malate oxidoreductase; 53.0 21 0.0007 32.2 5.6 40 218-258 176-216 (388)
219 2hk9_A Shikimate dehydrogenase 52.9 8.2 0.00028 32.6 2.9 28 232-260 128-155 (275)
220 1nkv_A Hypothetical protein YJ 52.0 13 0.00044 30.2 4.0 35 225-261 29-63 (256)
221 4f6l_B AUSA reductase domain p 51.9 3.5 0.00012 38.0 0.4 30 232-261 149-178 (508)
222 2uv8_A Fatty acid synthase sub 50.9 9.5 0.00032 41.3 3.5 31 231-261 673-704 (1887)
223 3lbf_A Protein-L-isoaspartate 50.1 18 0.0006 28.5 4.4 35 224-261 69-103 (210)
224 1bgv_A Glutamate dehydrogenase 49.2 23 0.00079 32.5 5.4 29 232-261 229-257 (449)
225 3ujc_A Phosphoethanolamine N-m 48.8 13 0.00044 30.3 3.4 35 225-261 48-82 (266)
226 2d5c_A AROE, shikimate 5-dehyd 48.8 12 0.00042 31.2 3.3 27 232-260 116-142 (263)
227 2vz8_A Fatty acid synthase; tr 48.3 13 0.00045 41.5 4.2 29 231-259 1882-1910(2512)
228 2pwy_A TRNA (adenine-N(1)-)-me 48.1 17 0.0006 29.4 4.2 36 224-261 88-125 (258)
229 4b4u_A Bifunctional protein fo 47.4 29 0.001 30.1 5.5 49 213-261 158-207 (303)
230 3e05_A Precorrin-6Y C5,15-meth 47.4 20 0.00067 28.1 4.2 31 224-256 32-62 (204)
231 2tmg_A Protein (glutamate dehy 46.5 36 0.0012 30.8 6.3 29 232-261 208-237 (415)
232 1kpg_A CFA synthase;, cyclopro 46.1 13 0.00045 30.9 3.1 34 226-261 58-91 (287)
233 2pff_A Fatty acid synthase sub 46.1 8.2 0.00028 41.0 2.1 30 232-261 475-505 (1688)
234 2nxc_A L11 mtase, ribosomal pr 45.2 26 0.0009 28.8 4.9 29 230-261 118-146 (254)
235 2bry_A NEDD9 interacting prote 44.9 18 0.00062 33.2 4.1 29 231-260 90-118 (497)
236 3zen_D Fatty acid synthase; tr 44.0 15 0.0005 41.9 3.8 32 230-261 2133-2165(3089)
237 1v9l_A Glutamate dehydrogenase 43.6 17 0.00059 33.0 3.7 30 231-261 208-237 (421)
238 2we8_A Xanthine dehydrogenase; 43.6 16 0.00054 32.9 3.3 29 232-261 203-231 (386)
239 3bus_A REBM, methyltransferase 43.1 22 0.00075 29.1 4.1 35 225-261 54-88 (273)
240 1i9g_A Hypothetical protein RV 42.7 22 0.00077 29.3 4.1 36 224-261 91-128 (280)
241 3tbh_A O-acetyl serine sulfhyd 42.1 33 0.0011 29.8 5.2 35 226-260 64-98 (334)
242 4a5l_A Thioredoxin reductase; 41.6 15 0.00051 30.7 2.8 32 229-261 148-179 (314)
243 1rp0_A ARA6, thiazole biosynth 41.1 17 0.00059 30.5 3.1 25 235-260 41-66 (284)
244 4at0_A 3-ketosteroid-delta4-5a 41.1 17 0.00057 33.5 3.2 26 235-261 43-68 (510)
245 1fbn_A MJ fibrillarin homologu 40.3 8.4 0.00029 31.2 0.9 35 225-261 67-102 (230)
246 1qo8_A Flavocytochrome C3 fuma 40.0 17 0.00056 34.0 3.1 26 235-261 123-148 (566)
247 2iid_A L-amino-acid oxidase; f 40.0 21 0.00071 32.3 3.7 29 231-260 31-59 (498)
248 1y0p_A Fumarate reductase flav 39.8 18 0.0006 33.8 3.2 26 235-261 128-153 (571)
249 3mb5_A SAM-dependent methyltra 39.7 30 0.001 28.0 4.3 35 224-260 85-121 (255)
250 4gcm_A TRXR, thioredoxin reduc 39.6 17 0.00058 30.5 2.8 31 230-261 142-172 (312)
251 2vdc_G Glutamate synthase [NAD 39.5 20 0.00069 32.6 3.5 28 232-260 121-148 (456)
252 2b25_A Hypothetical protein; s 39.2 24 0.00083 30.3 3.8 32 224-257 97-128 (336)
253 3rui_A Ubiquitin-like modifier 38.7 27 0.00091 30.8 4.0 27 232-259 33-59 (340)
254 2pbf_A Protein-L-isoaspartate 38.4 27 0.00092 27.8 3.8 27 229-257 77-103 (227)
255 3fmw_A Oxygenase; mithramycin, 36.2 24 0.0008 33.2 3.5 25 235-260 51-75 (570)
256 3on5_A BH1974 protein; structu 36.1 14 0.00046 33.1 1.7 30 231-261 197-226 (362)
257 1r18_A Protein-L-isoaspartate( 34.6 21 0.00073 28.5 2.6 27 229-257 81-107 (227)
258 3mvn_A UDP-N-acetylmuramate:L- 34.2 22 0.00074 27.4 2.4 27 229-256 135-161 (163)
259 3vc3_A Beta-cyanoalnine syntha 34.1 53 0.0018 28.6 5.2 35 226-260 79-113 (344)
260 2gqw_A Ferredoxin reductase; f 34.1 34 0.0012 30.3 4.0 32 229-261 141-172 (408)
261 3c4n_A Uncharacterized protein 33.7 24 0.00084 31.1 3.0 25 235-260 38-64 (405)
262 1l3i_A Precorrin-6Y methyltran 33.1 31 0.0011 26.1 3.2 30 225-256 26-55 (192)
263 1ygy_A PGDH, D-3-phosphoglycer 32.8 29 0.00098 32.4 3.4 29 232-261 141-169 (529)
264 2e1m_A L-glutamate oxidase; L- 32.7 39 0.0013 30.0 4.2 28 232-260 43-70 (376)
265 1i1n_A Protein-L-isoaspartate 32.0 40 0.0014 26.7 3.8 27 229-257 74-100 (226)
266 3fpz_A Thiazole biosynthetic e 31.8 28 0.00096 29.6 3.0 26 235-261 67-94 (326)
267 2dkh_A 3-hydroxybenzoate hydro 31.5 23 0.00079 33.7 2.6 26 234-260 33-59 (639)
268 3h8v_A Ubiquitin-like modifier 31.4 35 0.0012 29.3 3.5 26 232-258 35-60 (292)
269 2gmh_A Electron transfer flavo 31.0 30 0.001 32.5 3.3 25 235-260 37-67 (584)
270 1dl5_A Protein-L-isoaspartate 30.9 43 0.0015 28.5 4.0 31 225-257 68-98 (317)
271 3ps9_A TRNA 5-methylaminomethy 30.2 29 0.00099 33.1 3.0 27 234-261 273-299 (676)
272 4df3_A Fibrillarin-like rRNA/T 30.1 19 0.00065 29.9 1.5 33 224-258 69-101 (233)
273 1q1r_A Putidaredoxin reductase 30.0 45 0.0015 29.7 4.2 32 229-261 145-176 (431)
274 2bc0_A NADH oxidase; flavoprot 29.9 78 0.0027 28.6 5.8 30 231-261 192-221 (490)
275 3h5n_A MCCB protein; ubiquitin 29.5 42 0.0014 29.5 3.8 25 233-258 118-142 (353)
276 3pvc_A TRNA 5-methylaminomethy 28.9 33 0.0011 32.9 3.1 26 235-261 266-291 (689)
277 3vc1_A Geranyl diphosphate 2-C 28.6 37 0.0013 28.7 3.2 34 226-261 110-144 (312)
278 3k30_A Histamine dehydrogenase 28.5 44 0.0015 32.0 4.0 27 233-260 391-417 (690)
279 1vbf_A 231AA long hypothetical 28.5 50 0.0017 26.1 3.9 33 225-260 63-95 (231)
280 2o57_A Putative sarcosine dime 28.3 42 0.0014 27.9 3.4 31 229-261 79-109 (297)
281 1nhp_A NADH peroxidase; oxidor 28.3 46 0.0016 29.7 3.9 29 232-261 148-176 (447)
282 3ef6_A Toluene 1,2-dioxygenase 28.3 49 0.0017 29.2 4.0 32 229-261 139-170 (410)
283 2gpy_A O-methyltransferase; st 28.1 25 0.00086 28.2 1.9 32 228-261 50-82 (233)
284 2vvm_A Monoamine oxidase N; FA 28.0 40 0.0014 30.4 3.4 26 234-260 40-65 (495)
285 1o94_A Tmadh, trimethylamine d 27.8 43 0.0015 32.4 3.8 28 232-260 388-415 (729)
286 3nlc_A Uncharacterized protein 27.5 35 0.0012 32.1 3.0 26 234-260 108-133 (549)
287 2z3y_A Lysine-specific histone 27.0 47 0.0016 31.7 3.9 28 232-260 106-133 (662)
288 3vh1_A Ubiquitin-like modifier 26.7 46 0.0016 31.7 3.7 26 232-258 326-351 (598)
289 2pqm_A Cysteine synthase; OASS 26.7 1.1E+02 0.0036 26.5 5.9 34 226-260 71-104 (343)
290 1mo9_A ORF3; nucleotide bindin 26.6 43 0.0015 30.8 3.5 26 234-260 44-69 (523)
291 1hyu_A AHPF, alkyl hydroperoxi 26.6 47 0.0016 30.6 3.7 27 233-260 212-238 (521)
292 4gsl_A Ubiquitin-like modifier 26.5 52 0.0018 31.4 4.0 27 232-259 325-351 (615)
293 3jsk_A Cypbp37 protein; octame 26.0 45 0.0015 29.4 3.3 25 235-260 81-107 (344)
294 3d1c_A Flavin-containing putat 25.9 52 0.0018 28.0 3.7 29 232-261 165-193 (369)
295 2v03_A Cysteine synthase B; py 25.7 1.1E+02 0.0037 25.9 5.7 33 227-260 55-87 (303)
296 1y8q_A Ubiquitin-like 1 activa 25.7 56 0.0019 28.6 3.8 25 233-258 36-60 (346)
297 2v3a_A Rubredoxin reductase; a 25.3 57 0.0019 28.3 3.9 30 231-261 143-172 (384)
298 3qfa_A Thioredoxin reductase 1 25.3 47 0.0016 30.5 3.5 27 233-260 32-58 (519)
299 1lvl_A Dihydrolipoamide dehydr 25.3 52 0.0018 29.6 3.7 29 232-261 170-198 (458)
300 2rgh_A Alpha-glycerophosphate 25.2 43 0.0015 31.3 3.2 26 235-261 34-59 (571)
301 3klj_A NAD(FAD)-dependent dehy 24.9 36 0.0012 30.0 2.4 29 232-261 145-173 (385)
302 1ebd_A E3BD, dihydrolipoamide 24.5 58 0.002 29.1 3.8 29 232-261 169-197 (455)
303 3iv6_A Putative Zn-dependent a 24.5 75 0.0026 26.6 4.3 35 224-261 37-71 (261)
304 3dwg_A Cysteine synthase B; su 24.1 1.2E+02 0.0041 26.0 5.7 34 226-260 66-99 (325)
305 2vdc_G Glutamate synthase [NAD 24.0 62 0.0021 29.3 4.0 28 231-259 262-289 (456)
306 4gut_A Lysine-specific histone 24.0 51 0.0018 32.3 3.6 28 233-261 336-363 (776)
307 2x8g_A Thioredoxin glutathione 23.9 55 0.0019 30.5 3.7 28 232-260 106-133 (598)
308 3pl8_A Pyranose 2-oxidase; sub 23.9 45 0.0016 31.6 3.1 26 235-261 48-73 (623)
309 2gjc_A Thiazole biosynthetic e 23.9 47 0.0016 28.9 3.0 25 235-260 67-93 (326)
310 1p91_A Ribosomal RNA large sub 23.9 28 0.00096 28.5 1.5 28 231-260 84-112 (269)
311 2xag_A Lysine-specific histone 23.9 57 0.0019 32.4 3.9 28 232-260 277-304 (852)
312 3cgb_A Pyridine nucleotide-dis 23.8 63 0.0022 29.2 4.0 29 232-261 185-213 (480)
313 1d4d_A Flavocytochrome C fumar 23.8 41 0.0014 31.4 2.8 28 233-261 126-153 (572)
314 4aec_A Cysteine synthase, mito 23.6 99 0.0034 28.0 5.2 35 226-260 167-201 (430)
315 1xhc_A NADH oxidase /nitrite r 23.5 42 0.0014 29.2 2.6 29 232-261 142-170 (367)
316 2d59_A Hypothetical protein PH 23.5 63 0.0022 24.2 3.3 29 233-261 22-53 (144)
317 3kd9_A Coenzyme A disulfide re 23.4 61 0.0021 28.9 3.8 30 231-261 146-175 (449)
318 1g8a_A Fibrillarin-like PRE-rR 23.1 44 0.0015 26.5 2.5 33 227-261 68-102 (227)
319 3uwp_A Histone-lysine N-methyl 23.1 1.4E+02 0.0046 27.3 5.9 34 224-259 165-198 (438)
320 1z7w_A Cysteine synthase; tran 23.0 76 0.0026 27.1 4.2 35 226-260 59-93 (322)
321 2q0l_A TRXR, thioredoxin reduc 22.9 58 0.002 26.9 3.3 30 230-260 140-169 (311)
322 1v59_A Dihydrolipoamide dehydr 22.8 60 0.002 29.2 3.6 29 232-261 182-210 (478)
323 1p9o_A Phosphopantothenoylcyst 22.2 56 0.0019 28.4 3.1 19 243-261 65-83 (313)
324 2eq6_A Pyruvate dehydrogenase 22.1 63 0.0022 29.0 3.6 29 232-261 168-196 (464)
325 2r9z_A Glutathione amide reduc 21.7 71 0.0024 28.7 3.8 29 232-261 165-193 (463)
326 3ics_A Coenzyme A-disulfide re 21.7 67 0.0023 29.8 3.7 28 232-260 35-64 (588)
327 2xve_A Flavin-containing monoo 21.5 55 0.0019 29.6 3.0 29 232-261 196-224 (464)
328 2ipx_A RRNA 2'-O-methyltransfe 21.5 61 0.0021 25.8 3.1 33 227-261 72-106 (233)
329 1dus_A MJ0882; hypothetical pr 21.4 72 0.0024 23.9 3.3 33 225-260 45-77 (194)
330 1y7l_A O-acetylserine sulfhydr 21.1 1.2E+02 0.0042 25.6 5.1 33 227-260 56-88 (316)
331 2yqu_A 2-oxoglutarate dehydrog 21.1 68 0.0023 28.6 3.6 28 232-260 166-193 (455)
332 3f4k_A Putative methyltransfer 21.0 64 0.0022 25.9 3.1 31 229-261 43-73 (257)
333 3ggo_A Prephenate dehydrogenas 20.9 69 0.0024 27.4 3.4 25 233-258 33-57 (314)
334 1ges_A Glutathione reductase; 20.8 76 0.0026 28.4 3.8 29 232-261 166-194 (450)
335 4b1b_A TRXR, thioredoxin reduc 20.5 60 0.0021 30.3 3.1 24 236-260 45-68 (542)
336 3ic9_A Dihydrolipoamide dehydr 20.3 71 0.0024 29.0 3.5 30 231-261 172-201 (492)
No 1
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=100.00 E-value=1.5e-36 Score=276.20 Aligned_cols=176 Identities=30% Similarity=0.498 Sum_probs=161.7
Q ss_pred CCCCCcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEE
Q 024775 75 TKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVV 154 (262)
Q Consensus 75 ~~~~~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~V 154 (262)
...+.||++|||+++.++|.++.++++ +.+.|++++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|
T Consensus 20 ~~~~~~p~~MkA~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~E~~G~V 97 (353)
T 4dup_A 20 FQSMSLPQEMRFVDLKSFGGPDVMVIG-KRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP-PKDASPILGLELSGEI 97 (353)
T ss_dssp ---CCCCSSEEEEEESSSSSGGGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCC-CTTSCSSSCCEEEEEE
T ss_pred eecCCCChheeEEEEccCCCccceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCccccccEEEE
Confidence 344568999999999999988889998 89999999999999999999999999999997653 2457899999999999
Q ss_pred EEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHH-HHcCCCCC
Q 024775 155 VKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAG 233 (262)
Q Consensus 155 v~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al-~~~~~~~g 233 (262)
+++|++|++|++||+|+++.. .|+|+||++++++.++++|+++++++++.++.++.|||+++ +.+++++|
T Consensus 98 ~~vG~~v~~~~vGdrV~~~~~---------~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g 168 (353)
T 4dup_A 98 VGVGPGVSGYAVGDKVCGLAN---------GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEG 168 (353)
T ss_dssp EEECTTCCSCCTTCEEEEECS---------SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTT
T ss_pred EEECCCCCCCCCCCEEEEecC---------CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCC
Confidence 999999999999999998763 69999999999999999999999999999999999999999 56899999
Q ss_pred CEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 234 KSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++|||+||+|++|++++|+|+.+|++|+
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi 196 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAFGAEVY 196 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCEEE
Confidence 9999999999999999999999999875
No 2
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=100.00 E-value=5.1e-36 Score=271.65 Aligned_cols=172 Identities=29% Similarity=0.369 Sum_probs=158.7
Q ss_pred CCcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEe
Q 024775 78 GTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKV 157 (262)
Q Consensus 78 ~~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~v 157 (262)
..+|.+|||+++.+++.++.++++ +.+.|++++|||+|||.+++||++|++.++|.++. ..++|.++|||++|+|+++
T Consensus 16 ~~~p~~MkA~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~v 93 (342)
T 4eye_A 16 TQGPGSMKAIQAQSLSGPEGLVYT-DVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL-KMEPPFVPGIETAGVVRSA 93 (342)
T ss_dssp --CCCEEEEEEECSSSGGGGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSS-CCCSSBCCCSEEEEEEEEC
T ss_pred ccCCcceEEEEEecCCCCceeEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCCCccceeEEEEEEEE
Confidence 357999999999999988889998 99999999999999999999999999999997653 2467899999999999999
Q ss_pred CCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHH-HHcCCCCCCEE
Q 024775 158 GTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSI 236 (262)
Q Consensus 158 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al-~~~~~~~g~~V 236 (262)
|++++ |++||+|+++.. .|+|+||++++++.++++|++++++++++++.++.|||+++ ++.++++|++|
T Consensus 94 G~~v~-~~vGDrV~~~~~---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V 163 (342)
T 4eye_A 94 PEGSG-IKPGDRVMAFNF---------IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETV 163 (342)
T ss_dssp CTTSS-CCTTCEEEEECS---------SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEE
T ss_pred CCCCC-CCCCCEEEEecC---------CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEE
Confidence 99999 999999998753 69999999999999999999999999999999999999999 56899999999
Q ss_pred EEEcCchHHHHHHHHHHHHcCCccC
Q 024775 237 LVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 237 lI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
||+|++|++|++++|+|+.+|++|+
T Consensus 164 lV~Gasg~iG~~~~~~a~~~Ga~Vi 188 (342)
T 4eye_A 164 LVLGAAGGIGTAAIQIAKGMGAKVI 188 (342)
T ss_dssp EESSTTSHHHHHHHHHHHHTTCEEE
T ss_pred EEECCCCHHHHHHHHHHHHcCCEEE
Confidence 9999889999999999999999875
No 3
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=100.00 E-value=5.8e-36 Score=273.38 Aligned_cols=186 Identities=28% Similarity=0.383 Sum_probs=159.0
Q ss_pred CCCCCCCCcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEE
Q 024775 72 AEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVA 151 (262)
Q Consensus 72 ~~~~~~~~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~v 151 (262)
.++....+||++||||+++++ .++.++++ +.+.|++++|||||||.+++||++|++.++|.++. ..++|.++|||++
T Consensus 16 ~~~~~~~~m~~~mkA~~~~~~-~~~~l~~~-e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~P~v~GhE~~ 92 (363)
T 3uog_A 16 ENLYFQSMMSKWMQEWSTETV-APHDLKLA-ERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL-DLAFPFVPASDMS 92 (363)
T ss_dssp -------CCCSEEEEEEBSCT-TTTCCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC-CCCSSBCCCCEEE
T ss_pred ceeEEeccCchhhEEEEEccC-CCCCcEEE-eeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCCcCcccceE
Confidence 345555568999999999988 33458888 89999999999999999999999999999987653 2567899999999
Q ss_pred EEEEEeCCCCCCCCCCCEEEEecCcccc---------------CCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccc
Q 024775 152 GVVVKVGTQVKEFKEGDEVYGDINEKAL---------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPL 216 (262)
Q Consensus 152 G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~---------------~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~ 216 (262)
|+|+++|++|++|++||+|++.....|. .+....|+|+||++++++.++++|+++++++++.+++
T Consensus 93 G~V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~ 172 (363)
T 3uog_A 93 GVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPC 172 (363)
T ss_dssp EEEEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTT
T ss_pred EEEEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhccc
Confidence 9999999999999999999987422111 2233569999999999999999999999999999999
Q ss_pred hHHHHHHHH-HHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 217 AIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 217 ~~~tA~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++.|||+++ +++++++|++|||+| +|++|++++|+||.+|++|+
T Consensus 173 ~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi 217 (363)
T 3uog_A 173 AGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVI 217 (363)
T ss_dssp HHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEE
Confidence 999999999 568999999999999 99999999999999999875
No 4
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.4e-35 Score=268.98 Aligned_cols=175 Identities=38% Similarity=0.594 Sum_probs=157.1
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCC
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGT 159 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~ 159 (262)
+|++|||+++.+++++ ++++ +.+.|++++|||+|||.+++||++|++.+.|..+....++|.++|||++|+|+++|+
T Consensus 4 ~~~~mka~~~~~~~~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~ 80 (343)
T 3gaz_A 4 TTPTMIAAVVEEANGP--FVLR-KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGP 80 (343)
T ss_dssp --CEEEEEEECSTTCC--EEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECT
T ss_pred CchhheEEEEecCCCc--eEEE-eccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECC
Confidence 5788999999999876 7777 999999999999999999999999999999875433356789999999999999999
Q ss_pred CCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHH-HHcCCCCCCEEEE
Q 024775 160 QVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILV 238 (262)
Q Consensus 160 ~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al-~~~~~~~g~~VlI 238 (262)
+|++|++||+|+++.... ....|+|+||++++++.++++|+++++++++.+++++.|||+++ +++++++|++|||
T Consensus 81 ~v~~~~vGdrV~~~~~g~----~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV 156 (343)
T 3gaz_A 81 EVDSFRVGDAVFGLTGGV----GGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLI 156 (343)
T ss_dssp TCCSCCTTCEEEEECCSS----TTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred CCCCCCCCCEEEEEeCCC----CCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEE
Confidence 999999999999865311 12369999999999999999999999999999999999999999 6789999999999
Q ss_pred EcCchHHHHHHHHHHHHcCCccC
Q 024775 239 LNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 239 ~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+||+|++|++++|+|+.+|++|+
T Consensus 157 ~Ga~g~iG~~~~q~a~~~Ga~Vi 179 (343)
T 3gaz_A 157 QGGGGGVGHVAIQIALARGARVF 179 (343)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEE
T ss_pred ecCCCHHHHHHHHHHHHCCCEEE
Confidence 99999999999999999999875
No 5
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=100.00 E-value=1.4e-35 Score=267.60 Aligned_cols=170 Identities=27% Similarity=0.384 Sum_probs=157.5
Q ss_pred CCcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEe
Q 024775 78 GTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKV 157 (262)
Q Consensus 78 ~~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~v 157 (262)
+.+|.+|||+++++++.++.++++ +.+.|++++|||+|||.+++||++|++.+.|.++ .++|.++|||++|+|+++
T Consensus 3 ~~~p~~mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~P~i~G~e~~G~V~~v 78 (334)
T 3qwb_A 3 CTIPEQQKVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP---CEKPYVLGREASGTVVAK 78 (334)
T ss_dssp --CCSEEEEEEESSSSSGGGEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC---CCSSEECCSEEEEEEEEE
T ss_pred CCCchheEEEEEecCCCCceeEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC---CCCCCccccceEEEEEEE
Confidence 458999999999999998889998 9999999999999999999999999999998765 457899999999999999
Q ss_pred CCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEec-CCCeEECCCCCCHhh---HhcccchHHHHHHHHHH-cCCCC
Q 024775 158 GTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVE-ERLLAPKPKNLDFVQ---AAGLPLAIETAYEGLER-TGFSA 232 (262)
Q Consensus 158 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~-~~~~~~lP~~~~~~~---aa~l~~~~~tA~~al~~-~~~~~ 232 (262)
|++|++|++||+|+++. .|+|+||++++ ++.++++|+++++++ ++.+++.+.|||+++.+ .++++
T Consensus 79 G~~v~~~~~GdrV~~~~----------~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 148 (334)
T 3qwb_A 79 GKGVTNFEVGDQVAYIS----------NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKK 148 (334)
T ss_dssp CTTCCSCCTTCEEEEEC----------SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCT
T ss_pred CCCCCCCCCCCEEEEee----------CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCC
Confidence 99999999999999865 69999999999 999999999999999 88888999999999975 68999
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|++|||+||+|++|++++|+|+.+|++|+
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi 177 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTI 177 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEE
Confidence 99999999999999999999999999875
No 6
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=100.00 E-value=7.8e-36 Score=267.99 Aligned_cols=174 Identities=36% Similarity=0.530 Sum_probs=157.4
Q ss_pred cceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCC--CC-CCCCCCCCCCccEEEEEEEeC
Q 024775 82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF--KA-TDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 82 ~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~--~~-~~~~~p~~~G~e~vG~Vv~vG 158 (262)
++|||+++++++.++.++++ +.+.|++++|||+|||.+++||++|++.++|.. +. ....+|.++|||++|+|+++|
T Consensus 5 ~~Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG 83 (321)
T 3tqh_A 5 KEMKAIQFDQFGPPKVLKLV-DTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG 83 (321)
T ss_dssp CEEEEEEESSSCSGGGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred ccceEEEEccCCCcceeEEE-ecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence 46999999999998889998 899999999999999999999999999998831 10 125678999999999999999
Q ss_pred CCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHHHcCCCCCCEEEE
Q 024775 159 TQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILV 238 (262)
Q Consensus 159 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~~~~~~~g~~VlI 238 (262)
++|++|++||+|++.... ....|+|+||++++++.++++|+++++++++++++++.|||++++++++++|++|||
T Consensus 84 ~~v~~~~~GdrV~~~~~~-----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV 158 (321)
T 3tqh_A 84 SDVNNVNIGDKVMGIAGF-----PDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLI 158 (321)
T ss_dssp TTCCSCCTTCEEEEECST-----TTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCCCCCCCCCEEEEccCC-----CCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEE
Confidence 999999999999987531 123699999999999999999999999999999999999999998899999999999
Q ss_pred EcCchHHHHHHHHHHHHcCCccC
Q 024775 239 LNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 239 ~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+||+|++|++++|+||.+|++|+
T Consensus 159 ~Ga~G~vG~~a~q~a~~~Ga~vi 181 (321)
T 3tqh_A 159 HAGAGGVGHLAIQLAKQKGTTVI 181 (321)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEE
T ss_pred EcCCcHHHHHHHHHHHHcCCEEE
Confidence 99999999999999999999875
No 7
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=100.00 E-value=1.8e-35 Score=264.87 Aligned_cols=168 Identities=29% Similarity=0.424 Sum_probs=153.4
Q ss_pred cceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCC
Q 024775 82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQV 161 (262)
Q Consensus 82 ~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v 161 (262)
++|||+++++ .++.++++ +.+.|++++|||+|||.+++||++|++.++|..+. .++|.++|||++|+|+++|++|
T Consensus 3 ~tMka~~~~~--~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v 77 (315)
T 3goh_A 3 EQHQVWAYQT--KTHSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKANPIN--WSNGHVPGVDGAGVIVKVGAKV 77 (315)
T ss_dssp CEEEEEEEET--TTTEEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC--CCTTCCCCSEEEEEEEEECTTS
T ss_pred cceEEEEEeC--CCCeeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc--CCCCCEeeeeeEEEEEEeCCCC
Confidence 4599999986 33458888 89999999999999999999999999999987653 4678999999999999999999
Q ss_pred CCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHHHcCCCCCCEEEEEcC
Q 024775 162 KEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNG 241 (262)
Q Consensus 162 ~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~~~~~~~g~~VlI~Ga 241 (262)
++|++||+|++... ....|+|+||++++++.++++|+++++++++.++.++.|||++++++++++|++|||+|+
T Consensus 78 ~~~~vGdrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~Ga 151 (315)
T 3goh_A 78 DSKMLGRRVAYHTS------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGF 151 (315)
T ss_dssp CGGGTTCEEEEECC------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECC
T ss_pred CCCCCCCEEEEeCC------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECC
Confidence 99999999998752 234799999999999999999999999999999999999999997789999999999997
Q ss_pred chHHHHHHHHHHHHcCCccC
Q 024775 242 SGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 242 ~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|++|++++|+||.+|++|+
T Consensus 152 -G~vG~~a~qlak~~Ga~Vi 170 (315)
T 3goh_A 152 -GAVNNLLTQMLNNAGYVVD 170 (315)
T ss_dssp -SHHHHHHHHHHHHHTCEEE
T ss_pred -CHHHHHHHHHHHHcCCEEE
Confidence 9999999999999999875
No 8
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=100.00 E-value=1.6e-35 Score=267.87 Aligned_cols=171 Identities=23% Similarity=0.364 Sum_probs=157.1
Q ss_pred cccceeEEEEcccCCc-ceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeC
Q 024775 80 VPSEMKAWLYGEYGGV-DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~-~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG 158 (262)
|+.+||+|+++++|++ +.++++ +.+.|++++|||+|||.+++||++|++.++|.++. ..++|.++|||++|+|+++|
T Consensus 1 M~~~mka~~~~~~g~p~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~E~~G~V~~vG 78 (340)
T 3gms_A 1 MSLHGKLIQFHKFGNPKDVLQVE-YKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH-RIPLPNIPGYEGVGIVENVG 78 (340)
T ss_dssp -CCEEEEEEESSCSCHHHHEEEE-EEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT-TSCSSBCCCSCCEEEEEEEC
T ss_pred CCcccEEEEEecCCCchheEEEE-ecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC-CCCCCCcCCcceEEEEEEeC
Confidence 3457999999999987 678888 89999999999999999999999999999997653 25678999999999999999
Q ss_pred CCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEE
Q 024775 159 TQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSIL 237 (262)
Q Consensus 159 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~Vl 237 (262)
++|++|++||+|+++.. .|+|+||++++++.++++|+++++++++++++..+|||+++. ++++++|++||
T Consensus 79 ~~v~~~~vGdrV~~~~~---------~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~Vl 149 (340)
T 3gms_A 79 AFVSRELIGKRVLPLRG---------EGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLL 149 (340)
T ss_dssp TTSCGGGTTCEEEECSS---------SCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred CCCCCCCCCCEEEecCC---------CccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEE
Confidence 99999999999998642 799999999999999999999999999999999999999995 68999999999
Q ss_pred EEcCchHHHHHHHHHHHHcCCccC
Q 024775 238 VLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 238 I~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|+|++|++|++++|+|+.+|++|+
T Consensus 150 V~Ga~g~iG~~~~~~a~~~Ga~Vi 173 (340)
T 3gms_A 150 VNACGSAIGHLFAQLSQILNFRLI 173 (340)
T ss_dssp ESSTTSHHHHHHHHHHHHHTCEEE
T ss_pred EeCCccHHHHHHHHHHHHcCCEEE
Confidence 999888999999999999999875
No 9
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=100.00 E-value=2.4e-35 Score=268.57 Aligned_cols=173 Identities=28% Similarity=0.400 Sum_probs=156.8
Q ss_pred CcccceeEEEEcccCCc-ceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEe
Q 024775 79 TVPSEMKAWLYGEYGGV-DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKV 157 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~-~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~v 157 (262)
.||.+||++++.+++.+ +.++++ +.+.|++++|||+|||.+++||++|++.+.|.++.. ..+|.++|||++|+|+++
T Consensus 22 ~m~~~mka~~~~~~g~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~-~~~P~v~G~E~~G~V~~v 99 (357)
T 1zsy_A 22 SMPARVRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLL-PELPAVGGNEGVAQVVAV 99 (357)
T ss_dssp CCCCCEEEEEESSSSCHHHHEEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCC-CCSSEECCSCCEEEEEEE
T ss_pred hCchhhEEEEEecCCCccceEEEe-eccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCC-CCCCccccceEEEEEEEe
Confidence 58899999999999886 447777 889999999999999999999999999999876532 357899999999999999
Q ss_pred CCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHHH-cCCCCCCEE
Q 024775 158 GTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER-TGFSAGKSI 236 (262)
Q Consensus 158 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~~-~~~~~g~~V 236 (262)
|++|++|++||+|++... ..|+|+||++++++.++++|+++++++++++++.+.|||+++.+ +++++|++|
T Consensus 100 G~~v~~~~vGdrV~~~~~--------~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~V 171 (357)
T 1zsy_A 100 GSNVTGLKPGDWVIPANA--------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSV 171 (357)
T ss_dssp CTTCCSCCTTCEEEESSS--------CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEE
T ss_pred CCCCCCCCCCCEEEEcCC--------CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEE
Confidence 999999999999998642 26999999999999999999999999999999989999999965 799999999
Q ss_pred EEEcCchHHHHHHHHHHHHcCCccC
Q 024775 237 LVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 237 lI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
||+|++|++|++++|+||.+|++++
T Consensus 172 lV~Ga~G~vG~~aiqlak~~Ga~vi 196 (357)
T 1zsy_A 172 IQNASNSGVGQAVIQIAAALGLRTI 196 (357)
T ss_dssp EESSTTSHHHHHHHHHHHHHTCEEE
T ss_pred EEeCCcCHHHHHHHHHHHHcCCEEE
Confidence 9999889999999999999999764
No 10
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=100.00 E-value=5.4e-35 Score=265.29 Aligned_cols=176 Identities=23% Similarity=0.261 Sum_probs=153.9
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCC
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGT 159 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~ 159 (262)
|+.+||+|++.++++. ++++ +.+.|++++|||+|||.+++||++|++.++|..+. .++|.++|||++|+|+++|+
T Consensus 1 M~m~mka~~~~~~~~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~i~G~E~~G~V~~vG~ 75 (348)
T 3two_A 1 MRVQSKGFAIFSKDEH--FKPH-DFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE--GIYPMIPGHEIAGIIKEVGK 75 (348)
T ss_dssp CCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC--CCSSBCCCCCEEEEEEEECT
T ss_pred CceEEEEEEEccCCCC--CeEE-EeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC--CCCCeecCcceeEEEEEECC
Confidence 3457999999988754 7777 89999999999999999999999999999998654 46789999999999999999
Q ss_pred CCCCCCCCCEEEEecCc----c-----------c---cCCCC----------CCCceeeEEEecCCCeEECCCCCCHhhH
Q 024775 160 QVKEFKEGDEVYGDINE----K-----------A---LEGPK----------QFGSLAEYTAVEERLLAPKPKNLDFVQA 211 (262)
Q Consensus 160 ~v~~~~~Gd~V~~~~~~----~-----------~---~~~~~----------~~G~~ae~~~v~~~~~~~lP~~~~~~~a 211 (262)
+|++|++||+|++.+.. . | ..+.. ..|+|+||++++++.++++|++++++++
T Consensus 76 ~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~a 155 (348)
T 3two_A 76 GVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKV 155 (348)
T ss_dssp TCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHH
T ss_pred CCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHh
Confidence 99999999999864210 0 0 01111 2399999999999999999999999999
Q ss_pred hcccchHHHHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 212 AGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 212 a~l~~~~~tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+.+++++.|||+++++.++++|++|||+| +|++|++++|+||.+|++|+
T Consensus 156 a~l~~~~~ta~~~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi 204 (348)
T 3two_A 156 APLLCAGITTYSPLKFSKVTKGTKVGVAG-FGGLGSMAVKYAVAMGAEVS 204 (348)
T ss_dssp GGGGTHHHHHHHHHHHTTCCTTCEEEEES-CSHHHHHHHHHHHHTTCEEE
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEE
Confidence 99999999999999999999999999999 59999999999999999875
No 11
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=100.00 E-value=6.7e-35 Score=265.48 Aligned_cols=172 Identities=31% Similarity=0.425 Sum_probs=155.7
Q ss_pred CcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeC
Q 024775 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG 158 (262)
.+|.+||++++.+++.++.++++ +.+.|++++|||+|||.+++||++|++.+.|.++.. ..+|.++|||++|+|+++|
T Consensus 18 ~~~~~Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~-~~~p~v~G~E~~G~V~~vG 95 (354)
T 2j8z_A 18 LYFQSMLAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPP-PGASNILGLEASGHVAELG 95 (354)
T ss_dssp ---CEEEEEEESSCSSGGGEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-TTSCSSSCSEEEEEEEEEC
T ss_pred cchhheeEEEEccCCCccceEEe-ecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCC-CCCCcccceeeEEEEEEEC
Confidence 57888999999999987778888 899999999999999999999999999999876532 3578999999999999999
Q ss_pred CCC-CCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHH-HHcCCCCCCEE
Q 024775 159 TQV-KEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSI 236 (262)
Q Consensus 159 ~~v-~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al-~~~~~~~g~~V 236 (262)
++| ++|++||+|+++.. .|+|+||++++++.++++|++++++++++++.++.|||+++ +.+++++|++|
T Consensus 96 ~~v~~~~~vGdrV~~~~~---------~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~v 166 (354)
T 2j8z_A 96 PGCQGHWKIGDTAMALLP---------GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYV 166 (354)
T ss_dssp SCC--CCCTTCEEEEECS---------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEE
T ss_pred CCcCCCCCCCCEEEEecC---------CCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEE
Confidence 999 99999999998753 69999999999999999999999999999999999999999 56899999999
Q ss_pred EEEcCchHHHHHHHHHHHHcCCccC
Q 024775 237 LVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 237 lI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
||+||+|++|++++|+|+..|++|+
T Consensus 167 lV~Ga~ggiG~~~~~~a~~~Ga~Vi 191 (354)
T 2j8z_A 167 LIHAGLSGVGTAAIQLTRMAGAIPL 191 (354)
T ss_dssp EESSTTSHHHHHHHHHHHHTTCEEE
T ss_pred EEECCccHHHHHHHHHHHHcCCEEE
Confidence 9999999999999999999999875
No 12
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=100.00 E-value=1.3e-34 Score=265.16 Aligned_cols=175 Identities=29% Similarity=0.357 Sum_probs=151.8
Q ss_pred CCcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEe
Q 024775 78 GTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKV 157 (262)
Q Consensus 78 ~~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~v 157 (262)
|.||.+|||++++++++ ++++++.+.|++++|||+|||.+++||++|++.+.+. ..+|.++|||++|+|+++
T Consensus 6 m~~p~~mkA~v~~~~~~---l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-----~~~p~v~G~e~~G~V~~v 77 (371)
T 3gqv_A 6 FIPPPQQTALTVNDHDE---VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF-----ATPWAFLGTDYAGTVVAV 77 (371)
T ss_dssp CCCCSCEEEEEECTTSC---EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC----------CCTTSCCCSEEEEEEEEE
T ss_pred CCCchhceeEEEcCCCc---eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC-----CCCCccCccccEEEEEEe
Confidence 46899999999999876 5665488999999999999999999999999988763 335899999999999999
Q ss_pred CCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH-H-cCC-----
Q 024775 158 GTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-R-TGF----- 230 (262)
Q Consensus 158 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~-~~~----- 230 (262)
|++|+.|++||+|++.+. .|..+....|+|+||+++++..++++|+++++++++.+++++.|||+++. . .++
T Consensus 78 G~~v~~~~~GdrV~~~~~-~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~ 156 (371)
T 3gqv_A 78 GSDVTHIQVGDRVYGAQN-EMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSA 156 (371)
T ss_dssp CTTCCSCCTTCEEEEECC-TTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSC
T ss_pred CCCCCCCCCCCEEEEecc-CCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCcc
Confidence 999999999999998874 33344456799999999999999999999999999999999999999995 4 443
Q ss_pred ------CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 ------SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ------~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++|++|||+|++|++|++++|+||.+|++|+
T Consensus 157 ~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi 193 (371)
T 3gqv_A 157 DQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPI 193 (371)
T ss_dssp SSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEE
T ss_pred ccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEE
Confidence 8999999999889999999999999999875
No 13
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=100.00 E-value=6.7e-35 Score=265.92 Aligned_cols=178 Identities=23% Similarity=0.265 Sum_probs=154.0
Q ss_pred CCcccceeEEEEcccCCcceEEEEee--ecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEE
Q 024775 78 GTVPSEMKAWLYGEYGGVDVLKFDEK--VTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVV 155 (262)
Q Consensus 78 ~~~p~~~ka~v~~~~g~~~~l~~~~~--~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv 155 (262)
|.+|++||||++++++.. ++++ + .+.|++++|||+|||.+++||++|++.++|.++. .++|.++|||++|+|+
T Consensus 1 M~~p~~mka~~~~~~~~~--l~~~-~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~v~GhE~~G~V~ 75 (360)
T 1piw_A 1 MSYPEKFEGIAIQSHEDW--KNPK-KTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN--MKMPLVVGHEIVGKVV 75 (360)
T ss_dssp CCTTTCEEEEEECCSSST--TSCE-EEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC--CCSSEECCCCEEEEEE
T ss_pred CCCChheEEEEEecCCCC--eeEE-eccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC--CCCCcccCcCceEEEE
Confidence 357889999999998743 4455 7 8999999999999999999999999999987543 4578999999999999
Q ss_pred EeCCCCC-CCCCCCEEEEecC----c-----------cc-----cC------CCCCCCceeeEEEecCCCeEECCCCCCH
Q 024775 156 KVGTQVK-EFKEGDEVYGDIN----E-----------KA-----LE------GPKQFGSLAEYTAVEERLLAPKPKNLDF 208 (262)
Q Consensus 156 ~vG~~v~-~~~~Gd~V~~~~~----~-----------~~-----~~------~~~~~G~~ae~~~v~~~~~~~lP~~~~~ 208 (262)
++|++|+ +|++||+|+.... . .| .. +....|+|+||++++++.++++|+++++
T Consensus 76 ~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~ 155 (360)
T 1piw_A 76 KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPS 155 (360)
T ss_dssp EECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCH
T ss_pred EeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCH
Confidence 9999999 9999999954211 0 00 01 2234699999999999999999999999
Q ss_pred hhHhcccchHHHHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 209 VQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 209 ~~aa~l~~~~~tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++++.+++++.|||++++++++++|++|||+|+ |++|++++|+||.+|++|+
T Consensus 156 ~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi 207 (360)
T 1piw_A 156 HLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETY 207 (360)
T ss_dssp HHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEE
T ss_pred HHhhhhhhhHHHHHHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEE
Confidence 999999999999999998899999999999997 9999999999999999874
No 14
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=100.00 E-value=1.5e-34 Score=263.08 Aligned_cols=173 Identities=38% Similarity=0.551 Sum_probs=156.0
Q ss_pred CcccceeEEEEcccCCcceEEE-EeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEe
Q 024775 79 TVPSEMKAWLYGEYGGVDVLKF-DEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKV 157 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~~~l~~-~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~v 157 (262)
.+|.+|||+++.+++.++.+++ + +.+.|++++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++
T Consensus 25 ~~~~~Mka~~~~~~g~~~~l~~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~v~G~E~~G~V~~v 102 (351)
T 1yb5_A 25 TGQKLMRAVRVFEFGGPEVLKLRS-DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAV 102 (351)
T ss_dssp ---CEEEEEEESSCSSGGGEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC-CCCSSBCCCSCEEEEEEEE
T ss_pred cCcceEEEEEEccCCCcceeEEee-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCcCCceeEEEEEEE
Confidence 4577899999999988877888 6 88999999999999999999999999999986542 2457899999999999999
Q ss_pred CCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEE
Q 024775 158 GTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSI 236 (262)
Q Consensus 158 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~V 236 (262)
|++|++|++||+|++... ..|+|+||++++++.++++|+++++++++.+++++.|||+++. ..++++|++|
T Consensus 103 G~~v~~~~vGdrV~~~~~--------~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~v 174 (351)
T 1yb5_A 103 GDNASAFKKGDRVFTSST--------ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESV 174 (351)
T ss_dssp CTTCTTCCTTCEEEESCC--------SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEE
T ss_pred CCCCCCCCCCCEEEEeCC--------CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEE
Confidence 999999999999998542 2599999999999999999999999999999999999999996 6899999999
Q ss_pred EEEcCchHHHHHHHHHHHHcCCccC
Q 024775 237 LVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 237 lI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
||+|++|++|++++|+|+..|++|+
T Consensus 175 lV~GasggiG~~~~~~a~~~Ga~Vi 199 (351)
T 1yb5_A 175 LVHGASGGVGLAACQIARAYGLKIL 199 (351)
T ss_dssp EEETCSSHHHHHHHHHHHHTTCEEE
T ss_pred EEECCCChHHHHHHHHHHHCCCEEE
Confidence 9999899999999999999999875
No 15
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.6e-35 Score=263.85 Aligned_cols=169 Identities=31% Similarity=0.532 Sum_probs=155.6
Q ss_pred cceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCC
Q 024775 82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQV 161 (262)
Q Consensus 82 ~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v 161 (262)
++|||+++++++.++.++++ +.+.|++++|||+|||.+++||++|++.++|.++. ...+|.++|||++|+|+++|++|
T Consensus 2 m~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~e~~G~V~~vG~~v 79 (349)
T 4a27_A 2 MEMRAVVLAGFGGLNKLRLF-RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDN-PPKTPLVPGFECSGIVEALGDSV 79 (349)
T ss_dssp CCEEEEEECSSSSGGGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCSEEEEEEEEECTTC
T ss_pred ceeEEEEEccCCCcceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCC-CCCCCccccceeEEEEEEeCCCC
Confidence 46999999999988779998 89999999999999999999999999999997653 25678999999999999999999
Q ss_pred CCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEc
Q 024775 162 KEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLN 240 (262)
Q Consensus 162 ~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~G 240 (262)
++|++||+|+++.. .|+|+||++++++.++++|+++++++++.+++++.|||+++. .+++++|++|||+|
T Consensus 80 ~~~~~GdrV~~~~~---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G 150 (349)
T 4a27_A 80 KGYEIGDRVMAFVN---------YNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHS 150 (349)
T ss_dssp CSCCTTCEEEEECS---------SCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESS
T ss_pred CCCCCCCEEEEecC---------CCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence 99999999998763 699999999999999999999999999999999999999995 58999999999999
Q ss_pred CchHHHHHHHHHHHHcC-CccC
Q 024775 241 GSGGVGSLVIQVCYYYL-EFFF 261 (262)
Q Consensus 241 a~G~vG~~aiqlAk~~G-a~V~ 261 (262)
++|++|++++|+||.+| ++|+
T Consensus 151 a~G~vG~~a~qla~~~g~~~V~ 172 (349)
T 4a27_A 151 AGGGVGQAVAQLCSTVPNVTVF 172 (349)
T ss_dssp TTSHHHHHHHHHHTTSTTCEEE
T ss_pred CCcHHHHHHHHHHHHcCCcEEE
Confidence 88999999999999995 4553
No 16
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=100.00 E-value=1e-34 Score=261.12 Aligned_cols=168 Identities=30% Similarity=0.336 Sum_probs=156.3
Q ss_pred ceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCC
Q 024775 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (262)
Q Consensus 83 ~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~ 162 (262)
+|||++++++|.++.++++ +.+.|++++|||+|||.+++||++|++.+.|.++. .++|.++|||++|+|+++|++|+
T Consensus 1 MMkA~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~e~~G~V~~vG~~v~ 77 (325)
T 3jyn_A 1 MAKRIQFSTVGGPEVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA--PFLPSGLGAEGAGVVEAVGDEVT 77 (325)
T ss_dssp CEEEEEBSSCSSGGGCEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--SSSSBCCCCCEEEEEEEECTTCC
T ss_pred CcEEEEEecCCCcceeEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCceeEEEEEEECCCCC
Confidence 3999999999998889998 89999999999999999999999999999997664 46789999999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHHH-cCCCCCCEEEEEcC
Q 024775 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER-TGFSAGKSILVLNG 241 (262)
Q Consensus 163 ~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlI~Ga 241 (262)
+|++||+|+.... ..|+|+||++++++.++++|+++++++++.+++...|+|+++.+ .++++|++|||+||
T Consensus 78 ~~~~GdrV~~~~~--------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga 149 (325)
T 3jyn_A 78 RFKVGDRVAYGTG--------PLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAA 149 (325)
T ss_dssp SCCTTCEEEESSS--------SSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred CCCCCCEEEEecC--------CCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 9999999997542 37999999999999999999999999999999999999999975 79999999999999
Q ss_pred chHHHHHHHHHHHHcCCccC
Q 024775 242 SGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 242 ~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+|++|++++|+|+.+|++|+
T Consensus 150 ~g~iG~~~~~~a~~~Ga~Vi 169 (325)
T 3jyn_A 150 AGGVGSLACQWAKALGAKLI 169 (325)
T ss_dssp TSHHHHHHHHHHHHHTCEEE
T ss_pred CcHHHHHHHHHHHHCCCEEE
Confidence 99999999999999999875
No 17
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=100.00 E-value=1.7e-34 Score=261.08 Aligned_cols=174 Identities=28% Similarity=0.383 Sum_probs=153.9
Q ss_pred ceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCC
Q 024775 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (262)
Q Consensus 83 ~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~ 162 (262)
+|||+++++++.+ ++++ +.+.|++++|||+|||.+++||++|++.++|..+.. ..+|.++|||++|+|+++|++|+
T Consensus 2 ~MkA~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~P~v~G~E~~G~V~~vG~~v~ 77 (340)
T 3s2e_A 2 MMKAAVVRAFGAP--LTID-EVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVK-PTLPFIPGHEGVGYVSAVGSGVS 77 (340)
T ss_dssp EEEEEEBCSTTSC--CEEE-EEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSC-CCSSBCCCSEEEEEEEEECSSCC
T ss_pred ceEEEEEecCCCC--CEEE-EccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCC-CCCCcccCCcceEEEEEECCCCC
Confidence 5999999998765 6777 899999999999999999999999999999976532 46789999999999999999999
Q ss_pred CCCCCCEEEEecC-------------------ccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHH
Q 024775 163 EFKEGDEVYGDIN-------------------EKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYE 223 (262)
Q Consensus 163 ~~~~Gd~V~~~~~-------------------~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~ 223 (262)
+|++||+|+.... .....+....|+|+||++++++.++++|+++++++++.+++++.|||+
T Consensus 78 ~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~ 157 (340)
T 3s2e_A 78 RVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYK 157 (340)
T ss_dssp SCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHH
T ss_pred cCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHH
Confidence 9999999954211 111123345799999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++++.++++|++|||+| +|++|++++|+||.+|++|+
T Consensus 158 ~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi 194 (340)
T 3s2e_A 158 GLKVTDTRPGQWVVISG-IGGLGHVAVQYARAMGLRVA 194 (340)
T ss_dssp HHHTTTCCTTSEEEEEC-CSTTHHHHHHHHHHTTCEEE
T ss_pred HHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEE
Confidence 99889999999999998 59999999999999999875
No 18
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=2.8e-34 Score=263.47 Aligned_cols=177 Identities=21% Similarity=0.209 Sum_probs=155.1
Q ss_pred CcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeC
Q 024775 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG 158 (262)
.+|.+|||+++++++++ ++++ +.+.|++++|||||||++++||++|++.++|..+. ..+|.++|||++|+|+++|
T Consensus 4 ~~~~tmkA~v~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG 78 (378)
T 3uko_A 4 GQVITCKAAVAYEPNKP--LVIE-DVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPE--GLFPCILGHEAAGIVESVG 78 (378)
T ss_dssp TSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTT--CCSSBCCCCEEEEEEEEEC
T ss_pred ccceeeEEEEEecCCCc--cEEE-EecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCC--CCCCccCCccceEEEEEeC
Confidence 47889999999999875 6676 89999999999999999999999999999987653 5678999999999999999
Q ss_pred CCCCCCCCCCEEEEecCccc-------------cC--------C-------------------CCCCCceeeEEEecCCC
Q 024775 159 TQVKEFKEGDEVYGDINEKA-------------LE--------G-------------------PKQFGSLAEYTAVEERL 198 (262)
Q Consensus 159 ~~v~~~~~Gd~V~~~~~~~~-------------~~--------~-------------------~~~~G~~ae~~~v~~~~ 198 (262)
++|++|++||+|++.....| +. + ....|+|+||++++++.
T Consensus 79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~ 158 (378)
T 3uko_A 79 EGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVS 158 (378)
T ss_dssp TTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred CCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhh
Confidence 99999999999997654221 00 0 11136999999999999
Q ss_pred eEECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 199 LAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 199 ~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
++++|+++++++++.+++++.|||+++. +.++++|++|||+|+ |++|++++|+||.+|+ +|+
T Consensus 159 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi 222 (378)
T 3uko_A 159 VAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRII 222 (378)
T ss_dssp EEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEE
T ss_pred eEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence 9999999999999999999999999985 589999999999995 9999999999999999 564
No 19
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-34 Score=259.91 Aligned_cols=178 Identities=28% Similarity=0.367 Sum_probs=156.3
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCC
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGT 159 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~ 159 (262)
+|.+|||+++++++.. ++++ +.+.|++++|||+|||.+++||++|++.+.|..+. ...+|.++|||++|+|+++|+
T Consensus 2 ~p~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~vG~ 77 (347)
T 2hcy_A 2 IPETQKGVIFYESHGK--LEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPL-PVKLPLVGGHEGAGVVVGMGE 77 (347)
T ss_dssp CCSEEEEEEESSTTCC--CEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSEECCCEEEEEEEEECT
T ss_pred CCcccEEEEEeCCCCC--CEEE-EeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCC-CCCCCcccCccceEEEEEECC
Confidence 6788999999998843 6776 89999999999999999999999999999986542 245789999999999999999
Q ss_pred CCCCCCCCCEEEEecC----cc---cc------------CCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHH
Q 024775 160 QVKEFKEGDEVYGDIN----EK---AL------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIET 220 (262)
Q Consensus 160 ~v~~~~~Gd~V~~~~~----~~---~~------------~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~t 220 (262)
+|++|++||+|++... .. |. .+....|+|+||++++++.++++|+++++++++.+++++.|
T Consensus 78 ~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 157 (347)
T 2hcy_A 78 NVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGIT 157 (347)
T ss_dssp TCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHH
T ss_pred CCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHH
Confidence 9999999999987421 01 11 12234799999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 221 AYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 221 A~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
||+++++.++++|++|||+|++|++|++++|+|+..|++|+
T Consensus 158 a~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~ 198 (347)
T 2hcy_A 158 VYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVL 198 (347)
T ss_dssp HHHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEE
Confidence 99999888999999999999889999999999999999874
No 20
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=100.00 E-value=2.9e-34 Score=262.93 Aligned_cols=174 Identities=28% Similarity=0.423 Sum_probs=153.0
Q ss_pred CcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeC
Q 024775 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG 158 (262)
.+|++|||+++++++. ++++ +.+.|++++|||+|||.+++||++|++.++|.++ ..+|.++|||++|+|+++|
T Consensus 19 ~~p~~mkA~v~~~~~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~p~v~G~e~~G~V~~vG 91 (370)
T 4ej6_A 19 YFQSMMKAVRLESVGN---ISVR-NVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP---STPPVTLGHEFCGIVVEAG 91 (370)
T ss_dssp --CCEEEEEEEEETTE---EEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSEECCCSEEEEEEEEC
T ss_pred ccchheEEEEEecCCc---eEEE-EccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC---CCCCeecCcceEEEEEEEC
Confidence 5889999999998864 7777 9999999999999999999999999999998763 5678999999999999999
Q ss_pred CCCCCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHH
Q 024775 159 TQVKEFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIET 220 (262)
Q Consensus 159 ~~v~~~~~Gd~V~~~~~~~~------------------~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~t 220 (262)
++|++|++||+|++.....| ..+....|+|+||++++++.++++|+++++++++ ++.++.|
T Consensus 92 ~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~t 170 (370)
T 4ej6_A 92 SAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLAC 170 (370)
T ss_dssp TTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHH
T ss_pred CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHH
Confidence 99999999999998543211 1233457999999999999999999999999987 6678999
Q ss_pred HHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 221 AYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 221 A~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
||++++++++++|++|||+|+ |++|++++|+||.+|+ +|+
T Consensus 171 a~~~l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi 211 (370)
T 4ej6_A 171 CLHGVDLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVI 211 (370)
T ss_dssp HHHHHHHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence 999998899999999999995 9999999999999999 553
No 21
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=100.00 E-value=4.1e-34 Score=259.39 Aligned_cols=168 Identities=40% Similarity=0.566 Sum_probs=153.5
Q ss_pred ceeEEEEcccC---CcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCC
Q 024775 83 EMKAWLYGEYG---GVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGT 159 (262)
Q Consensus 83 ~~ka~v~~~~g---~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~ 159 (262)
+|||++++++| .++.++++ +.+.|++++|||+|||.+++||++|++.+.|. ...+|.++|||++|+|+++|+
T Consensus 2 ~MkA~~~~~~G~~~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~----~~~~p~i~G~e~~G~V~~vG~ 76 (346)
T 3fbg_A 2 SLKAIGFEQPFKLSDGNLFKTF-NLDIPEPKVHEILVKIQSISVNPVDTKQRLMD----VSKAPRVLGFDAIGVVESVGN 76 (346)
T ss_dssp CEEEEEBSSCCCGGGCCCCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHTTSC----CSSSCBCCCCCEEEEEEEECT
T ss_pred CcEEEEEEeccccCCCceeEec-cccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC----CCCCCcCcCCccEEEEEEeCC
Confidence 69999999998 45678888 99999999999999999999999999998886 246789999999999999999
Q ss_pred CCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCC------C
Q 024775 160 QVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFS------A 232 (262)
Q Consensus 160 ~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~------~ 232 (262)
+|++|++||+|++... ....|+|+||++++++.++++|+++++++++.+++++.|||+++. .++++ +
T Consensus 77 ~v~~~~~GdrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~ 150 (346)
T 3fbg_A 77 EVTMFNQGDIVYYSGS------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENE 150 (346)
T ss_dssp TCCSCCTTCEEEECCC------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHT
T ss_pred CCCcCCCCCEEEEcCC------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCC
Confidence 9999999999998532 234799999999999999999999999999999999999999995 57888 9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|++|||+||+|++|++++|+||.+|++|+
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi 179 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGLRVI 179 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEE
Confidence 99999999899999999999999999875
No 22
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=100.00 E-value=3.3e-34 Score=261.38 Aligned_cols=174 Identities=20% Similarity=0.210 Sum_probs=150.0
Q ss_pred CcccceeEEEEcccCCcceEEEEeeecCC--------CCCCCeEEEEEEEEecChhhHHhHcCC-CCCCCCCCCCCCCcc
Q 024775 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVP--------QVKEDQVLIKVVAAALNPVDGKRRQGK-FKATDSPLPTVPGYD 149 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~~~l~~~~~~~~p--------~~~~~eVlVkV~a~~i~~sD~~~~~g~-~~~~~~~~p~~~G~e 149 (262)
.+|.+|||+++.+++. ++++ +.+.| ++++|||||||.+++||++|++.+++. ......++|.++|||
T Consensus 4 ~~~~~mka~~~~~~~~---l~~~-~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E 79 (363)
T 3m6i_A 4 SASKTNIGVFTNPQHD---LWIS-EASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHE 79 (363)
T ss_dssp -CCSCCEEEEECTTCC---EEEE-ECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCE
T ss_pred CCcccceeEEEeCCCc---EEEE-EecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcc
Confidence 4788899999998766 7777 89999 999999999999999999999988743 233335678999999
Q ss_pred EEEEEEEeCCCCCCCCCCCEEEEecCccc-------------------cCCCCCCCceeeEEEecCCCeEECCCCCCHhh
Q 024775 150 VAGVVVKVGTQVKEFKEGDEVYGDINEKA-------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQ 210 (262)
Q Consensus 150 ~vG~Vv~vG~~v~~~~~Gd~V~~~~~~~~-------------------~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~ 210 (262)
++|+|+++|++|++|++||+|++.....| .+.....|+|+||++++++.++++|+ +++++
T Consensus 80 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~ 158 (363)
T 3m6i_A 80 SAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYEN 158 (363)
T ss_dssp EEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHH
T ss_pred eEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHH
Confidence 99999999999999999999998532111 11112579999999999999999999 99999
Q ss_pred HhcccchHHHHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 211 AAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 211 aa~l~~~~~tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
++.+ .++.|||++++++++++|++|||+|+ |++|++++|+||.+|++
T Consensus 159 aa~~-~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~ 205 (363)
T 3m6i_A 159 GAML-EPLSVALAGLQRAGVRLGDPVLICGA-GPIGLITMLCAKAAGAC 205 (363)
T ss_dssp HHHH-HHHHHHHHHHHHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCC
T ss_pred HHhh-hHHHHHHHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCC
Confidence 9977 57889999998899999999999995 99999999999999997
No 23
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=100.00 E-value=6.5e-34 Score=260.75 Aligned_cols=176 Identities=35% Similarity=0.578 Sum_probs=156.3
Q ss_pred CcccceeEEEEcccCCcceEEE-EeeecCCCC-CCCeEEEEEEEEecChhhHHhHcCCCC-------------CCCCCCC
Q 024775 79 TVPSEMKAWLYGEYGGVDVLKF-DEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFK-------------ATDSPLP 143 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~~~l~~-~~~~~~p~~-~~~eVlVkV~a~~i~~sD~~~~~g~~~-------------~~~~~~p 143 (262)
.++.+||+|++.++|.++.+++ + +.+.|++ ++|||+|||.+++||++|++.+.|..+ ....++|
T Consensus 17 ~~~~~mka~~~~~~g~~~~l~~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P 95 (375)
T 2vn8_A 17 NLYFQSMAWVIDKYGKNEVLRFTQ-NMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFP 95 (375)
T ss_dssp -CCCCEEEEEBSSCCSGGGCEEEE-EECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCS
T ss_pred ccCccceeEEeccCCCccceEEec-cccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCC
Confidence 4788899999999988777888 6 8899985 999999999999999999999988532 1112378
Q ss_pred CCCCccEEEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHH
Q 024775 144 TVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYE 223 (262)
Q Consensus 144 ~~~G~e~vG~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~ 223 (262)
.++|||++|+|+++|++|++|++||+|++.... ...|+|+||++++++.++++|+++++++++.+++++.|||+
T Consensus 96 ~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~------~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~ 169 (375)
T 2vn8_A 96 LTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP------WKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWS 169 (375)
T ss_dssp BCCCCEEEEEEEEECTTCCSCCTTCEEEEECCT------TSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHH
T ss_pred cccceeeeEEEEEeCCCCCCCCCCCEEEEecCC------CCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHH
Confidence 999999999999999999999999999987531 23699999999999999999999999999999999999999
Q ss_pred HHH-HcC----CCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 224 GLE-RTG----FSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 224 al~-~~~----~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++. .++ +++|++|||+||+|++|++++|+||.+|++|+
T Consensus 170 al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi 212 (375)
T 2vn8_A 170 AINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVT 212 (375)
T ss_dssp HHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEE
Confidence 995 578 99999999999999999999999999999875
No 24
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=100.00 E-value=7.6e-35 Score=264.40 Aligned_cols=175 Identities=25% Similarity=0.257 Sum_probs=152.5
Q ss_pred CCcccceeEEEEc--cc-CCcceEEEEeee---------cCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCC
Q 024775 78 GTVPSEMKAWLYG--EY-GGVDVLKFDEKV---------TVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTV 145 (262)
Q Consensus 78 ~~~p~~~ka~v~~--~~-g~~~~l~~~~~~---------~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~ 145 (262)
|.+|.+|||++++ ++ +.++.++++ +. +.|++++|||+|||++++||++|++.++|.++. ..++|.+
T Consensus 5 m~~p~~mka~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~p~v 82 (349)
T 3pi7_A 5 MTIPSEMKALLLVGDGYTKTPSGSALE-AMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQ-PRVKGRP 82 (349)
T ss_dssp CCCCSEEEEEEECSCBSCSSCCCSCCC-CSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSS-CBCTTSB
T ss_pred CCCchhheEEEEEccccCCCcccceEE-EeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCC-CCCCCCC
Confidence 4689999999999 55 234446666 66 999999999999999999999999999997653 2567899
Q ss_pred CCccEEEEEEEeCCCC-CCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHH
Q 024775 146 PGYDVAGVVVKVGTQV-KEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (262)
Q Consensus 146 ~G~e~vG~Vv~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~a 224 (262)
+|||++|+|+++|++| ++|++||+|++... ....|+|+||++++++.++++|+++++++++.+++..+|||++
T Consensus 83 ~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~ 156 (349)
T 3pi7_A 83 AGFEGVGTIVAGGDEPYAKSLVGKRVAFATG------LSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAM 156 (349)
T ss_dssp CCSEEEEEEEEECSSHHHHHHTTCEEEEECT------TSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHH
T ss_pred ccceEEEEEEEECCCccCCCCCCCEEEEecc------CCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHH
Confidence 9999999999999999 99999999998752 2347999999999999999999999999999999999999988
Q ss_pred HHHcCCCCC-CEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 225 LERTGFSAG-KSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 225 l~~~~~~~g-~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+++++ ++| ++|||+||+|++|++++|+||.+|++|+
T Consensus 157 ~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi 193 (349)
T 3pi7_A 157 FDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPI 193 (349)
T ss_dssp HHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEE
T ss_pred HHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE
Confidence 77777 767 7999999999999999999999999875
No 25
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=100.00 E-value=8.4e-34 Score=255.09 Aligned_cols=168 Identities=26% Similarity=0.304 Sum_probs=152.5
Q ss_pred ceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCC
Q 024775 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (262)
Q Consensus 83 ~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~ 162 (262)
+|||+++++++.++.++++ +.+.|++++|||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|++|+
T Consensus 1 ~Mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~E~~G~V~~vG~~v~ 77 (327)
T 1qor_A 1 MATRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP--PSLPSGLGTEAAGIVSKVGSGVK 77 (327)
T ss_dssp -CEEEEBSSCCSGGGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--SSSSBCCCSCEEEEEEEECTTCC
T ss_pred CcEEEEEcCCCChhheEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCCCceeEEEEEEECCCCC
Confidence 3899999999887778888 89999999999999999999999999999987642 35789999999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEcC
Q 024775 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNG 241 (262)
Q Consensus 163 ~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~Ga 241 (262)
+|++||+| +.+. ...|+|+||++++++.++++|+++++++++.++.++.|||+++. ..++++|++|||+||
T Consensus 78 ~~~~GdrV-~~~g-------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga 149 (327)
T 1qor_A 78 HIKAGDRV-VYAQ-------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA 149 (327)
T ss_dssp SCCTTCEE-EESC-------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred CCCCCCEE-EECC-------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC
Confidence 99999999 4431 12599999999999999999999999999999999999999997 689999999999999
Q ss_pred chHHHHHHHHHHHHcCCccC
Q 024775 242 SGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 242 ~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+|++|++++|+|+..|++|+
T Consensus 150 ~ggiG~~~~~~a~~~G~~V~ 169 (327)
T 1qor_A 150 AGGVGLIACQWAKALGAKLI 169 (327)
T ss_dssp TBHHHHHHHHHHHHHTCEEE
T ss_pred CCHHHHHHHHHHHHcCCEEE
Confidence 99999999999999999875
No 26
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=100.00 E-value=1e-33 Score=258.05 Aligned_cols=178 Identities=21% Similarity=0.300 Sum_probs=150.1
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCC-CCCCeEEEEEEEEecChhhHHhHcCCCCC-CCCCCCCCCCccEEEEEEEe
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQ-VKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDVAGVVVKV 157 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~-~~~~eVlVkV~a~~i~~sD~~~~~g~~~~-~~~~~p~~~G~e~vG~Vv~v 157 (262)
.|.+||++++++++.. ++++ +.+.|+ +++|||+|||.+++||++|++.++|.++. ....+|.++|||++|+|+++
T Consensus 12 ~~~~mka~~~~~~g~~--l~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~v 88 (359)
T 1h2b_A 12 GVERLKAARLHEYNKP--LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEV 88 (359)
T ss_dssp -----CEEEESSTTSC--CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEE
T ss_pred ChhhceEEEEecCCCC--cEEE-EccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEE
Confidence 4678999999998743 6677 889999 99999999999999999999999986531 01357899999999999999
Q ss_pred CCCCCCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEEecCCCeEECCCCCCHhhHh---cccc
Q 024775 158 GTQVKEFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAA---GLPL 216 (262)
Q Consensus 158 G~~v~~~~~Gd~V~~~~~~~~------------------~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa---~l~~ 216 (262)
|++|++|++||+|++.....| ..+....|+|+||++++++.++++|+++++++++ .+++
T Consensus 89 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~ 168 (359)
T 1h2b_A 89 AEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLAD 168 (359)
T ss_dssp CTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGT
T ss_pred CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhh
Confidence 999999999999987642211 1122347999999999999999999999999998 7888
Q ss_pred hHHHHHHHHHH--cCCCCCCEEEEEcCchHHHHHHHHHHHHc-CCccC
Q 024775 217 AIETAYEGLER--TGFSAGKSILVLNGSGGVGSLVIQVCYYY-LEFFF 261 (262)
Q Consensus 217 ~~~tA~~al~~--~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~-Ga~V~ 261 (262)
++.|||+++.+ +++++|++|||+|+ |++|++++|+||.+ |++|+
T Consensus 169 ~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi 215 (359)
T 1h2b_A 169 AGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVI 215 (359)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEE
T ss_pred hHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence 99999999987 89999999999996 99999999999999 99874
No 27
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=100.00 E-value=6.3e-34 Score=260.08 Aligned_cols=173 Identities=35% Similarity=0.456 Sum_probs=153.9
Q ss_pred cccceeEEEEccc---CCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEE
Q 024775 80 VPSEMKAWLYGEY---GGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVK 156 (262)
Q Consensus 80 ~p~~~ka~v~~~~---g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~ 156 (262)
++++|||++++++ +.++.++++ +.+.|++++|||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|++
T Consensus 19 ~m~~MkA~~~~~~~~~~~~~~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~E~~G~V~~ 95 (363)
T 4dvj_A 19 YFQSMKAVGYNKPAPITDDASLLDI-ELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD--GTDWKVIGYDAAGIVSA 95 (363)
T ss_dssp CCCEEEEEEBSSCCCTTSTTSSEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC----CCSBCCCCCEEEEEEE
T ss_pred hhheeEEEEEeccCCCCCCceEEEe-ecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC--CCCCCcccceeEEEEEE
Confidence 3466999999988 556678888 89999999999999999999999999999987653 46789999999999999
Q ss_pred eCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCC----
Q 024775 157 VGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFS---- 231 (262)
Q Consensus 157 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~---- 231 (262)
+|++|++|++||+|++... ....|+|+||++++++.++++|+++++++++.+++++.|||+++. ..+++
T Consensus 96 vG~~v~~~~vGdrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~ 169 (363)
T 4dvj_A 96 VGPDVTLFRPGDEVFYAGS------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVP 169 (363)
T ss_dssp ECTTCCSCCTTCEEEECCC------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCT
T ss_pred eCCCCCCCCCCCEEEEccC------CCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcC
Confidence 9999999999999997531 234799999999999999999999999999999999999999995 57888
Q ss_pred -CCCEEEEEcCchHHHHHHHHHHHH-cCCccC
Q 024775 232 -AGKSILVLNGSGGVGSLVIQVCYY-YLEFFF 261 (262)
Q Consensus 232 -~g~~VlI~Ga~G~vG~~aiqlAk~-~Ga~V~ 261 (262)
+|++|||+||+|++|++++|+||. .|++|+
T Consensus 170 ~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi 201 (363)
T 4dvj_A 170 GAAPAILIVGGAGGVGSIAVQIARQRTDLTVI 201 (363)
T ss_dssp TSEEEEEEESTTSHHHHHHHHHHHHHCCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHhcCCEEE
Confidence 999999999999999999999998 488775
No 28
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=100.00 E-value=6.3e-34 Score=259.43 Aligned_cols=171 Identities=22% Similarity=0.263 Sum_probs=152.4
Q ss_pred ccceeEEEEcccCCc-ceEEEEeeecCCCCC--CCeEEEEEEEEecChhhHHhHcCCCCCCCCCCC---------CCCCc
Q 024775 81 PSEMKAWLYGEYGGV-DVLKFDEKVTVPQVK--EDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP---------TVPGY 148 (262)
Q Consensus 81 p~~~ka~v~~~~g~~-~~l~~~~~~~~p~~~--~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p---------~~~G~ 148 (262)
|.+||++++++++++ +.++++ +.+.|++. +|||+|||.+++||++|++.++|.++.. ..+| .++||
T Consensus 1 ~~~mka~~~~~~g~~~~~l~~~-~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~P~~~~~~~p~~i~G~ 78 (364)
T 1gu7_A 1 MITAQAVLYTQHGEPKDVLFTQ-SFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK-PAKTTGFGTTEPAAPCGN 78 (364)
T ss_dssp CEEEEEEEESSCSCHHHHCEEE-EEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCC-CCCBSTTCCSSCBEECCS
T ss_pred CceEEEEEeccCCCchheeEEe-eccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCC-CCCCccccccCcccccCc
Confidence 356999999999875 457777 88888776 9999999999999999999999876531 3455 89999
Q ss_pred cEEEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCC-----------CCCHhhHhcccch
Q 024775 149 DVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPK-----------NLDFVQAAGLPLA 217 (262)
Q Consensus 149 e~vG~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~-----------~~~~~~aa~l~~~ 217 (262)
|++|+|+++|++|++|++||+|++... ..|+|+||++++++.++++|+ +++++++++++++
T Consensus 79 E~~G~V~~vG~~v~~~~vGdrV~~~~~--------~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~ 150 (364)
T 1gu7_A 79 EGLFEVIKVGSNVSSLEAGDWVIPSHV--------NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVN 150 (364)
T ss_dssp CCEEEEEEECTTCCSCCTTCEEEESSS--------CCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTH
T ss_pred eeEEEEEEeCCCCCcCCCCCEEEecCC--------CCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhcccc
Confidence 999999999999999999999998642 269999999999999999998 8999999999999
Q ss_pred HHHHHHHHHH-cCCCCC-CEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 218 IETAYEGLER-TGFSAG-KSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 218 ~~tA~~al~~-~~~~~g-~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+.|||+++.+ .++++| ++|||+|++|++|++++|+||.+|++|+
T Consensus 151 ~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi 196 (364)
T 1gu7_A 151 PLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSI 196 (364)
T ss_dssp HHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEE
Confidence 9999999987 589999 9999999889999999999999999864
No 29
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=100.00 E-value=2.1e-33 Score=257.08 Aligned_cols=175 Identities=23% Similarity=0.256 Sum_probs=152.0
Q ss_pred CcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeC
Q 024775 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG 158 (262)
..|.+|||+++.+++++ ++++ +.+.|++++|||||||.+++||++|++.++|..+ ..+|.++|||++|+|+++|
T Consensus 5 ~~p~~mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~P~v~GhE~~G~V~~vG 78 (373)
T 1p0f_A 5 GKDITCKAAVAWEPHKP--LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEIIP---SKFPVILGHEAVGVVESIG 78 (373)
T ss_dssp TSCEEEEEEEBSSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCCEEEEEEEEC
T ss_pred CCcceeEEEEEEcCCCC--eeEE-EeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC---CCCCcccCcCceEEEEEEC
Confidence 46788999999998754 6666 8899999999999999999999999999998754 4578999999999999999
Q ss_pred CCCCCCCCCCEEEEecCccc-------------cC--------CC------------------CCCCceeeEEEecCCCe
Q 024775 159 TQVKEFKEGDEVYGDINEKA-------------LE--------GP------------------KQFGSLAEYTAVEERLL 199 (262)
Q Consensus 159 ~~v~~~~~Gd~V~~~~~~~~-------------~~--------~~------------------~~~G~~ae~~~v~~~~~ 199 (262)
++|++|++||+|++.....| +. +. ...|+|+||++++++.+
T Consensus 79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~ 158 (373)
T 1p0f_A 79 AGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAV 158 (373)
T ss_dssp TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSE
T ss_pred CCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhE
Confidence 99999999999998642211 00 10 12489999999999999
Q ss_pred EECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 200 APKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 200 ~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
+++|++++++ ++.+++++.|||+++. ++++++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus 159 ~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi 220 (373)
T 1p0f_A 159 AKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRII 220 (373)
T ss_dssp EEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEE
T ss_pred EECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEE
Confidence 9999999999 9999999999999985 58999999999999 69999999999999999 563
No 30
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-33 Score=256.16 Aligned_cols=176 Identities=36% Similarity=0.512 Sum_probs=155.5
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~~ 163 (262)
|||+++++++.++.++++ +.+.|++++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++|++
T Consensus 1 Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~vG~~v~~ 78 (343)
T 2eih_A 1 MRAVVMRARGGPEVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASP-KLPLPHVLGADGSGVVDAVGPGVEG 78 (343)
T ss_dssp CEEEEECSSSSGGGEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSST-TCCSSEECCSEEEEEEEEECSSCCS
T ss_pred CeEEEEecCCCCceEEEE-ecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCC-CCCCCcccccceEEEEEEECCCCCC
Confidence 899999999987778888 89999999999999999999999999999986542 1357899999999999999999999
Q ss_pred CCCCCEEEEecCcccc------------------CCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHH
Q 024775 164 FKEGDEVYGDINEKAL------------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (262)
Q Consensus 164 ~~~Gd~V~~~~~~~~~------------------~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al 225 (262)
|++||+|+......|. .+....|+|+||++++++.++++|+++++++++.++.++.|||+++
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al 158 (343)
T 2eih_A 79 FAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMV 158 (343)
T ss_dssp CCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHH
Confidence 9999999954321110 1133469999999999999999999999999999999999999999
Q ss_pred HH-cCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 226 ER-TGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 226 ~~-~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+ +++++|++|||+|++|++|++++|+|+.+|++|+
T Consensus 159 ~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi 195 (343)
T 2eih_A 159 VDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVI 195 (343)
T ss_dssp TTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEE
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEE
Confidence 76 6999999999999889999999999999999874
No 31
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=100.00 E-value=2.2e-33 Score=256.84 Aligned_cols=177 Identities=25% Similarity=0.264 Sum_probs=153.2
Q ss_pred CcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeC
Q 024775 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG 158 (262)
..|.+|||+++.+++.. ++++ +.+.|++++|||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|
T Consensus 2 ~~p~~mkA~~~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG 76 (373)
T 2fzw_A 2 NEVIKCKAAVAWEAGKP--LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE--GCFPVILGHLGAGIVESVG 76 (373)
T ss_dssp CCCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT--CCSSBCCCCEEEEEEEEEC
T ss_pred CCccceEEEEEecCCCC--cEEE-EeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCC--CCCCccccccccEEEEEEC
Confidence 35778999999998754 6666 88999999999999999999999999999987543 4578999999999999999
Q ss_pred CCCCCCCCCCEEEEecCccc-------------cC--------CC------------------CCCCceeeEEEecCCCe
Q 024775 159 TQVKEFKEGDEVYGDINEKA-------------LE--------GP------------------KQFGSLAEYTAVEERLL 199 (262)
Q Consensus 159 ~~v~~~~~Gd~V~~~~~~~~-------------~~--------~~------------------~~~G~~ae~~~v~~~~~ 199 (262)
++|++|++||+|++.....| +. +. ...|+|+||++++++.+
T Consensus 77 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~ 156 (373)
T 2fzw_A 77 EGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISV 156 (373)
T ss_dssp TTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred CCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhhe
Confidence 99999999999998642211 00 10 12589999999999999
Q ss_pred EECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 200 APKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 200 ~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
+++|+++++++++.+++++.|||+++. +.++++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus 157 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi 219 (373)
T 2fzw_A 157 AKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRII 219 (373)
T ss_dssp EECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEE
T ss_pred EECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEE
Confidence 999999999999999999999999985 58999999999999 69999999999999999 563
No 32
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=100.00 E-value=1.8e-33 Score=255.59 Aligned_cols=176 Identities=24% Similarity=0.368 Sum_probs=147.6
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHc-CCCCCCCCCCCCCCCccEEEEEEEeC
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQ-GKFKATDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~-g~~~~~~~~~p~~~G~e~vG~Vv~vG 158 (262)
|+++|||+++++++. ++++ +.+.|++++|||+|||.+++||++|++.+. +..+....++|.++|||++|+|+++|
T Consensus 1 m~~~mka~~~~~~~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG 76 (352)
T 1e3j_A 1 MASDNLSAVLYKQND---LRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVG 76 (352)
T ss_dssp ---CCEEEEEEETTE---EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEEC
T ss_pred CcccCEEEEEEcCCc---EEEE-EecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeC
Confidence 345699999998653 7777 889999999999999999999999999887 43322224578999999999999999
Q ss_pred CCCCCCCCCCEEEEecCccc------c------------CC-CCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHH
Q 024775 159 TQVKEFKEGDEVYGDINEKA------L------------EG-PKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIE 219 (262)
Q Consensus 159 ~~v~~~~~Gd~V~~~~~~~~------~------------~~-~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~ 219 (262)
++|++|++||+|++.....| . .+ ....|+|+||++++++.++++|+++++++++.+ .++.
T Consensus 77 ~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ 155 (352)
T 1e3j_A 77 KNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLS 155 (352)
T ss_dssp TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHH
T ss_pred CCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHH
Confidence 99999999999998632111 0 01 123699999999999999999999999998865 5778
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 220 TAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 220 tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|||++++++++++|++|||+| +|++|++++|+||.+|++|+
T Consensus 156 ta~~al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi 196 (352)
T 1e3j_A 156 VGVHACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVV 196 (352)
T ss_dssp HHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEE
Confidence 999999889999999999999 59999999999999999864
No 33
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=100.00 E-value=2.3e-33 Score=254.16 Aligned_cols=173 Identities=30% Similarity=0.301 Sum_probs=153.1
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~~ 163 (262)
|||+++++++++ ++++ +.+.|++++|||+|||++++||++|++.++|..+..+.++|.++|||++|+|+++|++|++
T Consensus 1 MkA~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 77 (345)
T 3jv7_A 1 MKAVQYTEIGSE--PVVV-DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTG 77 (345)
T ss_dssp CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCS
T ss_pred CeEEEEcCCCCc--eEEE-EecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCC
Confidence 899999999876 6676 8999999999999999999999999999999766545678999999999999999999999
Q ss_pred CCCCCEEEEecCccc-------------c----------CCCCCCCceeeEEEec-CCCeEECCCCCCHhhHhcccchHH
Q 024775 164 FKEGDEVYGDINEKA-------------L----------EGPKQFGSLAEYTAVE-ERLLAPKPKNLDFVQAAGLPLAIE 219 (262)
Q Consensus 164 ~~~Gd~V~~~~~~~~-------------~----------~~~~~~G~~ae~~~v~-~~~~~~lP~~~~~~~aa~l~~~~~ 219 (262)
|++||+|++.....| + .+....|+|+||++++ ++.++++|+ +++++++.+++++.
T Consensus 78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ 156 (345)
T 3jv7_A 78 FGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGL 156 (345)
T ss_dssp CCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTH
T ss_pred CCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHH
Confidence 999999998643211 1 2334579999999999 899999999 99999999999999
Q ss_pred HHHHHHHHc--CCCCCCEEEEEcCchHHHHHHHHHHHHc-CCccC
Q 024775 220 TAYEGLERT--GFSAGKSILVLNGSGGVGSLVIQVCYYY-LEFFF 261 (262)
Q Consensus 220 tA~~al~~~--~~~~g~~VlI~Ga~G~vG~~aiqlAk~~-Ga~V~ 261 (262)
|||+++.+. ++++|++|+|+|+ |++|++++|+||.+ |++|+
T Consensus 157 ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi 200 (345)
T 3jv7_A 157 TPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVI 200 (345)
T ss_dssp HHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence 999999875 8999999999995 99999999999999 66664
No 34
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=100.00 E-value=3.6e-33 Score=252.63 Aligned_cols=172 Identities=22% Similarity=0.277 Sum_probs=150.0
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~~ 163 (262)
|||+++...++ ..++++ +.++|+|++|||||||.++|||++|++.++|.++ .++|.++|||++|+|+++|++|+.
T Consensus 1 MKA~v~~~~~~-~~~~l~-e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~---~~~p~i~GhE~aG~V~~vG~~V~~ 75 (348)
T 4eez_A 1 MKAAVVRHNPD-GYADLV-EKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG---NKAGTVLGHEGIGIVKEIGADVSS 75 (348)
T ss_dssp CEEEEECSSCC-SSEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC---CCTTCBCCSEEEEEEEEECTTCCS
T ss_pred CeEEEEEcCCC-CcEEEE-EeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC---CCCCcccceeEEEEEEEECceeee
Confidence 89999965433 237777 8999999999999999999999999999999765 467899999999999999999999
Q ss_pred CCCCCEEEEecCccc-------------------cCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHH
Q 024775 164 FKEGDEVYGDINEKA-------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (262)
Q Consensus 164 ~~~Gd~V~~~~~~~~-------------------~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~a 224 (262)
|++||+|++.....+ ..+....|+|+||+++++..++++|+++++++++++++++.|||++
T Consensus 76 ~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~ 155 (348)
T 4eez_A 76 LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKA 155 (348)
T ss_dssp CCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEee
Confidence 999999987543211 2233457999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHc-CCccC
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYY-LEFFF 261 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~-Ga~V~ 261 (262)
++.+++++|++|||+| +|++|++++|+|+.+ |++|+
T Consensus 156 l~~~~~~~g~~VlV~G-aG~~g~~a~~~a~~~~g~~Vi 192 (348)
T 4eez_A 156 IKVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVI 192 (348)
T ss_dssp HHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTSCCEEE
T ss_pred ecccCCCCCCEEEEEc-CCCccHHHHHHHHHhCCCEEE
Confidence 9999999999999998 699999999999876 56663
No 35
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=100.00 E-value=1.2e-33 Score=256.48 Aligned_cols=175 Identities=25% Similarity=0.278 Sum_probs=148.9
Q ss_pred ccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcC-CCCCCCCCCCCCCCccEEEEEEEeCC
Q 024775 81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQG-KFKATDSPLPTVPGYDVAGVVVKVGT 159 (262)
Q Consensus 81 p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g-~~~~~~~~~p~~~G~e~vG~Vv~vG~ 159 (262)
+++||++++++++. .++++ +.+.|++++|||+|||.+++||++|++.++| .++....++|.++|||++|+|+++|+
T Consensus 2 m~~mka~~~~~~g~--~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~ 78 (348)
T 2d8a_A 2 SEKMVAIMKTKPGY--GAELV-EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGP 78 (348)
T ss_dssp -CEEEEEEECSSSS--SCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECT
T ss_pred CCcceEEEEECCCC--CEEEE-ECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECC
Confidence 34699999999884 36777 8999999999999999999999999999988 43211135689999999999999999
Q ss_pred CCCCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHH
Q 024775 160 QVKEFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETA 221 (262)
Q Consensus 160 ~v~~~~~Gd~V~~~~~~~~------------------~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA 221 (262)
+|++|++||+|++.....| ..+....|+|+||++++++.++++|+++++++++.+. .+.||
T Consensus 79 ~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta 157 (348)
T 2d8a_A 79 GVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNA 157 (348)
T ss_dssp TCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHH
T ss_pred CCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHH
Confidence 9999999999998642211 0122346999999999999999999999999998774 77899
Q ss_pred HHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 222 YEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 222 ~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
|++++++++ +|++|||+|+ |++|++++|+||.+|+ +|+
T Consensus 158 ~~~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi 196 (348)
T 2d8a_A 158 VDTVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVI 196 (348)
T ss_dssp HHHHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEE
T ss_pred HHHHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence 999987889 9999999997 9999999999999999 764
No 36
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=100.00 E-value=5.5e-33 Score=253.10 Aligned_cols=177 Identities=24% Similarity=0.339 Sum_probs=151.3
Q ss_pred CcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeC
Q 024775 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG 158 (262)
.++++|+++++.+.. +.++++ +.+.|++++|||+|||.+++||++|++.++|.++. ..+|.++|||++|+|+++|
T Consensus 5 ~~~m~~~a~~~~~~~--~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG 79 (357)
T 2cf5_A 5 EAERKTTGWAARDPS--GILSPY-TYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM--SNYPMVPGHEVVGEVVEVG 79 (357)
T ss_dssp -CCCEEEEEEECSTT--CCEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC--CCSSBCCCCEEEEEEEEEC
T ss_pred cCcceeEEEEEccCC--CCcEEE-EecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC--CCCCeecCcceeEEEEEEC
Confidence 456778888876543 347777 88999999999999999999999999999886543 4578999999999999999
Q ss_pred CCCCCCCCCCEEEEecC----cc---c-------c------------CCCCCCCceeeEEEecCCCeEECCCCCCHhhHh
Q 024775 159 TQVKEFKEGDEVYGDIN----EK---A-------L------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAA 212 (262)
Q Consensus 159 ~~v~~~~~Gd~V~~~~~----~~---~-------~------------~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa 212 (262)
++|++|++||+|+.... .. | | .+....|+|+||++++++.++++|+++++++++
T Consensus 80 ~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa 159 (357)
T 2cf5_A 80 SDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAA 159 (357)
T ss_dssp SSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHT
T ss_pred CCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhh
Confidence 99999999999986321 00 0 0 011246999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHcCCC-CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 213 GLPLAIETAYEGLERTGFS-AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 213 ~l~~~~~tA~~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++++.|||+++++.+++ +|++|||+| +|++|++++|+||.+|++|+
T Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi 208 (357)
T 2cf5_A 160 PLLCAGVTVYSPLSHFGLKQPGLRGGILG-LGGVGHMGVKIAKAMGHHVT 208 (357)
T ss_dssp GGGTHHHHHHHHHHHTSTTSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEE
T ss_pred hhhhhHHHHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEE
Confidence 9999999999999988998 999999999 69999999999999999874
No 37
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=100.00 E-value=4.1e-33 Score=255.37 Aligned_cols=175 Identities=25% Similarity=0.288 Sum_probs=151.5
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCC
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGT 159 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~ 159 (262)
.|.+||++++.+++.. ++++ +.+.|++++|||+|||.+++||++|++.+.|. +. .++|.++|||++|+|+++|+
T Consensus 5 ~p~~mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~--~~~P~v~GhE~~G~V~~vG~ 78 (376)
T 1e3i_A 5 KVIKCKAAIAWKTGSP--LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPK-KK--ALFPVVLGHECAGIVESVGP 78 (376)
T ss_dssp SCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SC--CCSSBCCCCEEEEEEEEECT
T ss_pred CChheeEEEEecCCCC--eEEE-EeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CC--CCCCcccCccccEEEEEECC
Confidence 5778999999998754 6666 88999999999999999999999999999886 32 46789999999999999999
Q ss_pred CCCCCCCCCEEEEecCccc-------------cC------------CC------------------CCCCceeeEEEecC
Q 024775 160 QVKEFKEGDEVYGDINEKA-------------LE------------GP------------------KQFGSLAEYTAVEE 196 (262)
Q Consensus 160 ~v~~~~~Gd~V~~~~~~~~-------------~~------------~~------------------~~~G~~ae~~~v~~ 196 (262)
+|+.|++||+|++.....| +. +. ...|+|+||+++++
T Consensus 79 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~ 158 (376)
T 1e3i_A 79 GVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSE 158 (376)
T ss_dssp TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred CCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEecc
Confidence 9999999999998642111 00 10 02489999999999
Q ss_pred CCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 197 RLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 197 ~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
+.++++|+++++++++.+++++.|||+++. ++++++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus 159 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi 224 (376)
T 1e3i_A 159 ANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRII 224 (376)
T ss_dssp GGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEE
T ss_pred ccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEE
Confidence 999999999999999999999999999985 58999999999999 69999999999999999 563
No 38
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=100.00 E-value=2.6e-33 Score=256.24 Aligned_cols=174 Identities=21% Similarity=0.249 Sum_probs=150.6
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCC
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGT 159 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~ 159 (262)
.|.+||++++++++.+ ++++ +.+.|++++|||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|+
T Consensus 3 ~~~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~P~v~GhE~~G~V~~vG~ 76 (371)
T 1f8f_A 3 ELKDIIAAVTPCKGAD--FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP---VPLPAVLGHEGSGIIEAIGP 76 (371)
T ss_dssp -CEEEEEEEBCSTTCC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCEEEEEEEEECT
T ss_pred ccccceEEEEcCCCCC--eEEE-EecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC---CCCCcccCcccceEEEEeCC
Confidence 3557999999998754 6666 8899999999999999999999999999998654 45789999999999999999
Q ss_pred CCCCCCCCCEEEEecCcccc-----------------------------------CC------CCCCCceeeEEEecCCC
Q 024775 160 QVKEFKEGDEVYGDINEKAL-----------------------------------EG------PKQFGSLAEYTAVEERL 198 (262)
Q Consensus 160 ~v~~~~~Gd~V~~~~~~~~~-----------------------------------~~------~~~~G~~ae~~~v~~~~ 198 (262)
+|++|++||+|++.. ..|. .+ ....|+|+||++++++.
T Consensus 77 ~v~~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~ 155 (371)
T 1f8f_A 77 NVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENN 155 (371)
T ss_dssp TCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGG
T ss_pred CCCCCCCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhh
Confidence 999999999999853 1110 00 01258999999999999
Q ss_pred eEECCCCCCHhhHhcccchHHHHHHHH-HHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 199 LAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 199 ~~~lP~~~~~~~aa~l~~~~~tA~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
++++|+++++++++.+++++.|||+++ +++++++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus 156 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi 219 (371)
T 1f8f_A 156 TVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIII 219 (371)
T ss_dssp EEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEE
T ss_pred eEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEE
Confidence 999999999999999999999999999 468999999999999 69999999999999999 453
No 39
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=100.00 E-value=2.9e-33 Score=254.27 Aligned_cols=170 Identities=23% Similarity=0.293 Sum_probs=149.8
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHH-hHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGK-RRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~-~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~ 162 (262)
|||++++++++ ++++ +.+.|++++|||+|||.+++||++|++ ++.|..+ .++|.++|||++|+|+++|++|+
T Consensus 1 MkA~~~~~~~~---~~~~-e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~---~~~p~v~G~E~~G~V~~vG~~v~ 73 (352)
T 3fpc_A 1 MKGFAMLSIGK---VGWI-EKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG---ERHNMILGHEAVGEVVEVGSEVK 73 (352)
T ss_dssp CEEEEEEETTE---EEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC---CCSSEECCCEEEEEEEEECTTCC
T ss_pred CeEEEEccCCC---ceEE-eCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC---CCCCcccCCcceEEEEEECCCCC
Confidence 89999999987 6666 899999999999999999999999999 5688654 45789999999999999999999
Q ss_pred CCCCCCEEEEecCccc---------------------cCCCCCCCceeeEEEecCC--CeEECCCCCCHhhHhcccchHH
Q 024775 163 EFKEGDEVYGDINEKA---------------------LEGPKQFGSLAEYTAVEER--LLAPKPKNLDFVQAAGLPLAIE 219 (262)
Q Consensus 163 ~~~~Gd~V~~~~~~~~---------------------~~~~~~~G~~ae~~~v~~~--~~~~lP~~~~~~~aa~l~~~~~ 219 (262)
+|++||+|++.....| ..+....|+|+||+++++. .++++|+++++++++.++.++.
T Consensus 74 ~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ 153 (352)
T 3fpc_A 74 DFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMT 153 (352)
T ss_dssp SCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHH
T ss_pred cCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhH
Confidence 9999999997532111 0122357999999999976 8999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 220 TAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 220 tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
|||++++++++++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus 154 ta~~al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi 195 (352)
T 3fpc_A 154 TGFHGAELANIKLGDTVCVIG-IGPVGLMSVAGANHLGAGRIF 195 (352)
T ss_dssp HHHHHHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEE
T ss_pred HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEE
Confidence 999999889999999999998 69999999999999999 564
No 40
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=100.00 E-value=1.4e-33 Score=254.39 Aligned_cols=169 Identities=25% Similarity=0.322 Sum_probs=149.5
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCC-CCCCCCCCCCCCccEEEEEEEeCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF-KATDSPLPTVPGYDVAGVVVKVGTQVK 162 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~-~~~~~~~p~~~G~e~vG~Vv~vG~~v~ 162 (262)
|||+++.+++.++.++++ +.+.|++++|||+|||.+++||++|++.++|.+ +.....+|.++|||++|+|+++|++|+
T Consensus 2 Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~ 80 (333)
T 1wly_A 2 VMAAVIHKKGGPDNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT 80 (333)
T ss_dssp CEEEEESSCSSGGGEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred cEEEEEcccCCcceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence 899999999887778888 899999999999999999999999999998865 211134689999999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhh--HhcccchHHHHHHHHH-HcCCCCCCEEEEE
Q 024775 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQ--AAGLPLAIETAYEGLE-RTGFSAGKSILVL 239 (262)
Q Consensus 163 ~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~--aa~l~~~~~tA~~al~-~~~~~~g~~VlI~ 239 (262)
+|++||+|+.... ..|+|+||++++++.++++|+++++++ +++++.++.|||+++. .+++++|++|||+
T Consensus 81 ~~~~GdrV~~~~~--------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~ 152 (333)
T 1wly_A 81 DFTVGERVCTCLP--------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIH 152 (333)
T ss_dssp SCCTTCEEEECSS--------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEET
T ss_pred CCCCCCEEEEecC--------CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEE
Confidence 9999999976431 259999999999999999999999999 8999999999999997 5899999999999
Q ss_pred cCchHHHHHHHHHHHHcCCccC
Q 024775 240 NGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 240 Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|++|++|++++|+|+..|++|+
T Consensus 153 Ga~ggiG~~~~~~a~~~G~~Vi 174 (333)
T 1wly_A 153 AAAGGMGHIMVPWARHLGATVI 174 (333)
T ss_dssp TTTSTTHHHHHHHHHHTTCEEE
T ss_pred CCccHHHHHHHHHHHHCCCEEE
Confidence 9999999999999999999875
No 41
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=100.00 E-value=4.4e-33 Score=251.98 Aligned_cols=173 Identities=27% Similarity=0.363 Sum_probs=151.6
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~~ 163 (262)
|||+++++++.. ++++ +.+.|++++|||+|||.+++||++|++.++|..+. ...+|.++|||++|+|+++|++|++
T Consensus 1 Mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~GhE~~G~V~~vG~~v~~ 76 (339)
T 1rjw_A 1 MKAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV-KPKLPLIPGHEGVGIVEEVGPGVTH 76 (339)
T ss_dssp CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCSCEEEEEEEECTTCCS
T ss_pred CeEEEEcCCCCC--cEEE-EeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCc-CCCCCeeccccceEEEEEECCCCCc
Confidence 899999998843 6676 89999999999999999999999999999987542 2457899999999999999999999
Q ss_pred CCCCCEEEEecCc----cc---------------cCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHH
Q 024775 164 FKEGDEVYGDINE----KA---------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (262)
Q Consensus 164 ~~~Gd~V~~~~~~----~~---------------~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~a 224 (262)
|++||+|++.... .| ..+....|+|+||++++++.++++|+++++++++.+++++.|||++
T Consensus 77 ~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~ 156 (339)
T 1rjw_A 77 LKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA 156 (339)
T ss_dssp CCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHH
T ss_pred CCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHH
Confidence 9999999874210 00 1123357999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+++.++++|++|||+|+ |++|++++|+|+.+|++|+
T Consensus 157 l~~~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi 192 (339)
T 1rjw_A 157 LKVTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVV 192 (339)
T ss_dssp HHHHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEE
T ss_pred HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEE
Confidence 98889999999999996 8899999999999999875
No 42
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=100.00 E-value=6.2e-33 Score=254.03 Aligned_cols=175 Identities=24% Similarity=0.302 Sum_probs=151.9
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCC
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGT 159 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~ 159 (262)
.|.+|||+++.+++.+ ++++ +.+.|++++|||+|||.+++||++|++.+.|..+. .+|.++|||++|+|+++|+
T Consensus 5 ~~~~mkA~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~P~v~GhE~~G~V~~vG~ 78 (374)
T 2jhf_A 5 KVIKCKAAVLWEEKKP--FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIGE 78 (374)
T ss_dssp SCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---CSSBCCCCSEEEEEEEECT
T ss_pred CceeEEEEEEecCCCc--eEEE-EccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC---CCCcccCcCceEEEEEECC
Confidence 4678999999998754 6666 88999999999999999999999999999987542 3789999999999999999
Q ss_pred CCCCCCCCCEEEEecCccc-------------cC--------CC------------------CCCCceeeEEEecCCCeE
Q 024775 160 QVKEFKEGDEVYGDINEKA-------------LE--------GP------------------KQFGSLAEYTAVEERLLA 200 (262)
Q Consensus 160 ~v~~~~~Gd~V~~~~~~~~-------------~~--------~~------------------~~~G~~ae~~~v~~~~~~ 200 (262)
+|++|++||+|++.....| +. +. ...|+|+||++++++.++
T Consensus 79 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~ 158 (374)
T 2jhf_A 79 GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVA 158 (374)
T ss_dssp TCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEE
T ss_pred CCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeE
Confidence 9999999999998642111 00 10 024899999999999999
Q ss_pred ECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 201 PKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 201 ~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
++|+++++++++.+++++.|||+++. ++++++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus 159 ~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi 220 (374)
T 2jhf_A 159 KIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARII 220 (374)
T ss_dssp ECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEE
T ss_pred ECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEE
Confidence 99999999999999999999999985 58999999999999 69999999999999999 563
No 43
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=100.00 E-value=2.5e-33 Score=251.52 Aligned_cols=171 Identities=26% Similarity=0.257 Sum_probs=151.4
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~~ 163 (262)
|||++++++++++.++++ +.+.|++++|||+|||.+++||++|++.++|..+. ..++|.++|||++|+|+++| +++
T Consensus 1 MkA~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~~G--v~~ 76 (324)
T 3nx4_A 1 MQALILEQQDGKTLASVQ-HLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKI-IRHFPMIPGIDFAGTVHASE--DPR 76 (324)
T ss_dssp CEEEEEEESSSSEEEEEE-ECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTC-CCSSSBCCCSEEEEEEEEES--STT
T ss_pred CceEEEecCCCCceeeEe-ecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCC-CCCCCccccceeEEEEEEeC--CCC
Confidence 899999999998889998 99999999999999999999999999999997653 25678999999999999998 678
Q ss_pred CCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH---HcCCCCCC-EEEEE
Q 024775 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE---RTGFSAGK-SILVL 239 (262)
Q Consensus 164 ~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~---~~~~~~g~-~VlI~ 239 (262)
|++||+|++.. +..+....|+|+||++++++.++++|+++++++++.++..+.|||+++. +.++++++ .|||+
T Consensus 77 ~~vGdrV~~~~---~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~ 153 (324)
T 3nx4_A 77 FHAGQEVLLTG---WGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVT 153 (324)
T ss_dssp CCTTCEEEEEC---TTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEES
T ss_pred CCCCCEEEEcc---cccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEE
Confidence 99999999863 1223335799999999999999999999999999999999999998884 46677743 49999
Q ss_pred cCchHHHHHHHHHHHHcCCccC
Q 024775 240 NGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 240 Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|++|++|++++|+||.+|++|+
T Consensus 154 Ga~G~vG~~aiqla~~~Ga~Vi 175 (324)
T 3nx4_A 154 GASGGVGSTAVALLHKLGYQVA 175 (324)
T ss_dssp STTSHHHHHHHHHHHHTTCCEE
T ss_pred CCCcHHHHHHHHHHHHcCCEEE
Confidence 9889999999999999999875
No 44
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=100.00 E-value=4.6e-33 Score=254.89 Aligned_cols=175 Identities=21% Similarity=0.238 Sum_probs=151.9
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHH-hHcCCCCCCCCCCCCCCCccEEEEEEEeC
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGK-RRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~-~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG 158 (262)
.|.+|||+++.+++++ ++++ +.+.|++++|||+|||.+++||++|++ .+.|..+ ..+|.++|||++|+|+++|
T Consensus 5 ~~~~mka~~~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~---~~~P~v~GhE~~G~V~~vG 78 (374)
T 1cdo_A 5 KVIKCKAAVAWEANKP--LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK---DGFPVVLGHEGAGIVESVG 78 (374)
T ss_dssp SCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT---TSCSEECCCCEEEEEEEEC
T ss_pred CcceeEEEEEecCCCC--eEEE-EeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC---CCCCcccCccceEEEEEEC
Confidence 5678999999998754 6666 889999999999999999999999999 8888654 4578999999999999999
Q ss_pred CCCCCCCCCCEEEEecCccc-------------cC--------CC------------------CCCCceeeEEEecCCCe
Q 024775 159 TQVKEFKEGDEVYGDINEKA-------------LE--------GP------------------KQFGSLAEYTAVEERLL 199 (262)
Q Consensus 159 ~~v~~~~~Gd~V~~~~~~~~-------------~~--------~~------------------~~~G~~ae~~~v~~~~~ 199 (262)
++|++|++||+|++.....| +. +. ...|+|+||++++++.+
T Consensus 79 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~ 158 (374)
T 1cdo_A 79 PGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAV 158 (374)
T ss_dssp TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGE
T ss_pred CCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhhe
Confidence 99999999999998642211 00 11 02489999999999999
Q ss_pred EECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 200 APKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 200 ~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
+++|+++++++++.+++++.|||+++. ++++++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus 159 ~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi 221 (374)
T 1cdo_A 159 AKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRII 221 (374)
T ss_dssp EECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEE
T ss_pred EECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEE
Confidence 999999999999999999999999985 68999999999999 69999999999999999 563
No 45
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=100.00 E-value=9.2e-33 Score=252.96 Aligned_cols=175 Identities=22% Similarity=0.222 Sum_probs=149.6
Q ss_pred ccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCC
Q 024775 81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQ 160 (262)
Q Consensus 81 p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~ 160 (262)
..+||+|++.++++ .++++ +.+.|++++|||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|++
T Consensus 20 ~~~~~a~~~~~~~~--~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG~~ 94 (369)
T 1uuf_A 20 GLKIKAVGAYSAKQ--PLEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG--TVYPCVPGHEIVGRVVAVGDQ 94 (369)
T ss_dssp ---CEEEEBSSTTS--CCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC--CCSSBCCCCCEEEEEEEECTT
T ss_pred CceEEEEEEcCCCC--CcEEE-EecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCC--CCCCeecccCceEEEEEECCC
Confidence 34589999876643 37777 89999999999999999999999999999986543 357899999999999999999
Q ss_pred CCCCCCCCEEEEecCcc--------------ccC-------------CCCCCCceeeEEEecCCCeEECCCC-CCHhhHh
Q 024775 161 VKEFKEGDEVYGDINEK--------------ALE-------------GPKQFGSLAEYTAVEERLLAPKPKN-LDFVQAA 212 (262)
Q Consensus 161 v~~~~~Gd~V~~~~~~~--------------~~~-------------~~~~~G~~ae~~~v~~~~~~~lP~~-~~~~~aa 212 (262)
|++|++||+|++..... .+. +....|+|+||++++++.++++|++ +++++++
T Consensus 95 V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa 174 (369)
T 1uuf_A 95 VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVA 174 (369)
T ss_dssp CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHG
T ss_pred CCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhh
Confidence 99999999998742110 000 2124699999999999999999999 9999999
Q ss_pred cccchHHHHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 213 GLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 213 ~l~~~~~tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++++.|||+++++.++++|++|||+| +|++|++++|+||.+|++|+
T Consensus 175 ~l~~~~~tA~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~Vi 222 (369)
T 1uuf_A 175 PLLCAGITTYSPLRHWQAGPGKKVGVVG-IGGLGHMGIKLAHAMGAHVV 222 (369)
T ss_dssp GGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred hhhhhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 9999999999999988999999999999 59999999999999999874
No 46
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=100.00 E-value=1.4e-32 Score=248.51 Aligned_cols=168 Identities=20% Similarity=0.290 Sum_probs=146.8
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCC-CCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~ 162 (262)
|||++++++|. ++++ |.|+|++ ++|||||||+++|||++|++.+.|..+ ..+|+++|||++|+|+++|++|+
T Consensus 1 MkAvv~~~~g~---l~v~-e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~---~~~P~i~G~E~~G~V~~vG~~V~ 73 (346)
T 4a2c_A 1 MKSVVNDTDGI---VRVA-ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA---HYYPITLGHEFSGYIDAVGSGVD 73 (346)
T ss_dssp CEEEEECSSSC---EEEE-ECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS---SSSSBCCCCEEEEEEEEECTTCC
T ss_pred CCEEEEecCCC---EEEE-EEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC---CCCCccccEEEEEEEEEECCCcc
Confidence 89999999987 7777 9999985 699999999999999999999988654 46789999999999999999999
Q ss_pred CCCCCCEEEEecCccc------------------cCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHH
Q 024775 163 EFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (262)
Q Consensus 163 ~~~~Gd~V~~~~~~~~------------------~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~a 224 (262)
.+++||+|++.....| ..+....|+|+||++++++.++++|+++++++++++. .+.+++++
T Consensus 74 ~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~~ 152 (346)
T 4a2c_A 74 DLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLHA 152 (346)
T ss_dssp SCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHHH
T ss_pred cccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHHH
Confidence 9999999987643211 2234567999999999999999999999999998764 45567777
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
+.+.++++|++|+|+| +|++|++++|+||.+|+++
T Consensus 153 ~~~~~~~~g~~VlV~G-aG~vG~~aiq~ak~~G~~~ 187 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIG-AGTIGLLAIQCAVALGAKS 187 (346)
T ss_dssp HHHTTCCTTSEEEEEC-CSHHHHHHHHHHHHTTCSE
T ss_pred HHHhccCCCCEEEEEC-CCCcchHHHHHHHHcCCcE
Confidence 7889999999999998 6999999999999999875
No 47
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=100.00 E-value=4e-33 Score=261.02 Aligned_cols=181 Identities=31% Similarity=0.424 Sum_probs=151.5
Q ss_pred CcccceeEEEEcccC-----------CcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHc---------------
Q 024775 79 TVPSEMKAWLYGEYG-----------GVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQ--------------- 132 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g-----------~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~--------------- 132 (262)
.+|++|||+++++++ ..+.++++ +.+.|++++|||+|||.+++||++|++...
T Consensus 20 ~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~ 98 (447)
T 4a0s_A 20 PVPDTYLALHLRAEDADMFKGVADKDVRKSLRLG-EVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNAR 98 (447)
T ss_dssp CCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHT
T ss_pred CCChhheeeeeeccccccccccccCCCCCCceEE-eccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcc
Confidence 589999999999987 12347887 999999999999999999999999985432
Q ss_pred -CCCCCCCCCCC-CCCCccEEEEEEEeCCCCCCCCCCCEEEEecCccc-----------------cCCCC-CCCceeeEE
Q 024775 133 -GKFKATDSPLP-TVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKA-----------------LEGPK-QFGSLAEYT 192 (262)
Q Consensus 133 -g~~~~~~~~~p-~~~G~e~vG~Vv~vG~~v~~~~~Gd~V~~~~~~~~-----------------~~~~~-~~G~~ae~~ 192 (262)
+.++. ..++| .++|||++|+|+++|++|++|++||+|++.+...| ..+.. ..|+|+||+
T Consensus 99 ~g~~~~-~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~ 177 (447)
T 4a0s_A 99 QGGWAT-RHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYG 177 (447)
T ss_dssp TCGGGG-GGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEE
T ss_pred cCcccc-ccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeee
Confidence 21111 12456 69999999999999999999999999998642111 11111 259999999
Q ss_pred EecCCCeEECCCCCCHhhHhcccchHHHHHHHHH---HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 193 AVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE---RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 193 ~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~---~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+++++.++++|+++++++++.+++++.|||+++. .+++++|++|||+|++|++|++++|+|+.+|++|+
T Consensus 178 ~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi 249 (447)
T 4a0s_A 178 VVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPV 249 (447)
T ss_dssp EEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred ecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 9999999999999999999999999999999994 37899999999999889999999999999999864
No 48
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=100.00 E-value=8.8e-33 Score=252.31 Aligned_cols=169 Identities=24% Similarity=0.335 Sum_probs=151.4
Q ss_pred CcccceeEEEEcccCCc--ceEEE-EeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEE
Q 024775 79 TVPSEMKAWLYGEYGGV--DVLKF-DEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVV 155 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~--~~l~~-~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv 155 (262)
.+|.+|||+++++++.. +.+++ + +.+.|++++|||+|||.+++||++|++.++|.++. ..++|.++|||++|+|+
T Consensus 19 ~~~~~MkA~~~~~~g~~~~~~l~~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~i~G~E~~G~V~ 96 (362)
T 2c0c_A 19 YFQSMMQKLVVTRLSPNFREAVTLSR-DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP-SVKPPFDIGFEGIGEVV 96 (362)
T ss_dssp HHCCEEEEEEECSCCSSHHHHEEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT-TCCSCEECCSEEEEEEE
T ss_pred cchhhceEEEEeecCCCccceeEEEe-ecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC-CCCCCCCCCceeEEEEE
Confidence 46888999999998863 46888 7 89999999999999999999999999999987542 24578999999999999
Q ss_pred EeCCCCC-CCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCC
Q 024775 156 KVGTQVK-EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAG 233 (262)
Q Consensus 156 ~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g 233 (262)
++|++|+ +|++||+|++.. .|+|+||++++++.++++|+. . .++++++.++.|||+++. ..++++|
T Consensus 97 ~vG~~V~~~~~vGdrV~~~~----------~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g 164 (362)
T 2c0c_A 97 ALGLSASARYTVGQAVAYMA----------PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEG 164 (362)
T ss_dssp EECTTGGGTCCTTCEEEEEC----------SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTT
T ss_pred EECCCccCCCCCCCEEEEcc----------CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCC
Confidence 9999999 999999999864 599999999999999999986 3 467778889999999996 4789999
Q ss_pred CEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 234 KSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++|||+||+|++|++++|+|+.+|++|+
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi 192 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKAKCHVI 192 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHTTCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCEEE
Confidence 9999999999999999999999999875
No 49
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=100.00 E-value=8.6e-33 Score=259.64 Aligned_cols=183 Identities=29% Similarity=0.393 Sum_probs=152.5
Q ss_pred CCcccceeEEEEcccC-------------CcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCC--------
Q 024775 78 GTVPSEMKAWLYGEYG-------------GVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK-------- 136 (262)
Q Consensus 78 ~~~p~~~ka~v~~~~g-------------~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~-------- 136 (262)
+.+|++|||+++.+++ ....++++ +.+.|++++|||||||.+++||++|++...+...
T Consensus 25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~ 103 (456)
T 3krt_A 25 LPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLD-DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER 103 (456)
T ss_dssp SCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHH
T ss_pred CCCCcceEEEEEeccccccccccccccCCCCCCcEEE-EccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhh
Confidence 3689999999999872 22457887 9999999999999999999999999876543210
Q ss_pred -----C--CCCCCC-CCCCccEEEEEEEeCCCCCCCCCCCEEEEecCccc-----------------cCCC-CCCCceee
Q 024775 137 -----A--TDSPLP-TVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKA-----------------LEGP-KQFGSLAE 190 (262)
Q Consensus 137 -----~--~~~~~p-~~~G~e~vG~Vv~vG~~v~~~~~Gd~V~~~~~~~~-----------------~~~~-~~~G~~ae 190 (262)
. ...++| .++|||++|+|+++|++|++|++||+|++.+...+ ..+. ...|+|+|
T Consensus 104 ~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~ae 183 (456)
T 3krt_A 104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAE 183 (456)
T ss_dssp HHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBS
T ss_pred ccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccc
Confidence 0 012456 58999999999999999999999999998653110 1111 12599999
Q ss_pred EEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHHH---cCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 191 YTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER---TGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 191 ~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~~---~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|++++++.++++|+++++++++.+++++.|||+++.. +++++|++|||+|++|++|++++|+||.+|++|+
T Consensus 184 y~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi 257 (456)
T 3krt_A 184 IALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPI 257 (456)
T ss_dssp EEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred eEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999999999999999953 7899999999999889999999999999999864
No 50
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=100.00 E-value=1e-32 Score=251.07 Aligned_cols=173 Identities=20% Similarity=0.292 Sum_probs=146.5
Q ss_pred ceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCC-CCCCCCCCCCCCCccEEEEEEEeCCCC
Q 024775 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGK-FKATDSPLPTVPGYDVAGVVVKVGTQV 161 (262)
Q Consensus 83 ~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~-~~~~~~~~p~~~G~e~vG~Vv~vG~~v 161 (262)
+|||+++++++. ++++ +.+.|++++|||+|||.+++||++|++.+++. ......++|.++|||++|+|+++|++|
T Consensus 7 ~mka~~~~~~~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V 82 (356)
T 1pl8_A 7 NNLSLVVHGPGD---LRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSV 82 (356)
T ss_dssp CCEEEEEEETTE---EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTC
T ss_pred CceEEEEecCCc---EEEE-EccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCC
Confidence 499999998653 7777 88999999999999999999999999988743 221113568999999999999999999
Q ss_pred CCCCCCCEEEEecCccc------------------cCC-CCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHH
Q 024775 162 KEFKEGDEVYGDINEKA------------------LEG-PKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAY 222 (262)
Q Consensus 162 ~~~~~Gd~V~~~~~~~~------------------~~~-~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~ 222 (262)
++|++||+|++.....| ..+ ....|+|+||++++++.++++|+++++++++.+ .++.|||
T Consensus 83 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~ 161 (356)
T 1pl8_A 83 KHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGI 161 (356)
T ss_dssp CSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHH
T ss_pred CCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHH
Confidence 99999999998632111 011 123699999999999999999999999998865 5788999
Q ss_pred HHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 223 EGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 223 ~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
++++++++++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus 162 ~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi 200 (356)
T 1pl8_A 162 HACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVV 200 (356)
T ss_dssp HHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEE
Confidence 999889999999999999 69999999999999999 664
No 51
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=100.00 E-value=2e-32 Score=247.99 Aligned_cols=173 Identities=26% Similarity=0.332 Sum_probs=146.6
Q ss_pred cceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCC
Q 024775 82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQV 161 (262)
Q Consensus 82 ~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v 161 (262)
.+|||+++++++.. ++++ +.+.|++++|||+|||.+++||++|++.++|.++.....+|.++|||++|+|+++|++
T Consensus 2 ~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~- 77 (344)
T 2h6e_A 2 VKSKAALLKKFSEP--LSIE-DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL- 77 (344)
T ss_dssp EEEEBCEECSCCC--------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-
T ss_pred ceeEEEEEecCCCC--CeEE-EeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-
Confidence 36999999998743 6776 8899999999999999999999999999998754212457899999999999999999
Q ss_pred CCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEEec-CCCeEECCCCCCHhhHhcccchHHHHH
Q 024775 162 KEFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVE-ERLLAPKPKNLDFVQAAGLPLAIETAY 222 (262)
Q Consensus 162 ~~~~~Gd~V~~~~~~~~------------------~~~~~~~G~~ae~~~v~-~~~~~~lP~~~~~~~aa~l~~~~~tA~ 222 (262)
++|++||+|++.....| ..+....|+|+||++++ ++.++++ +++++++++.+++++.|||
T Consensus 78 ~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~ 156 (344)
T 2h6e_A 78 AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSM 156 (344)
T ss_dssp CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHH
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHH
Confidence 99999999987642211 11123479999999999 9999999 9999999999999999999
Q ss_pred HHHHHc-----CCCCCCEEEEEcCchHHHHHHHHHHHHc--CCccC
Q 024775 223 EGLERT-----GFSAGKSILVLNGSGGVGSLVIQVCYYY--LEFFF 261 (262)
Q Consensus 223 ~al~~~-----~~~~g~~VlI~Ga~G~vG~~aiqlAk~~--Ga~V~ 261 (262)
+++++. ++ +|++|||+|+ |++|++++|+||.+ |++|+
T Consensus 157 ~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi 200 (344)
T 2h6e_A 157 GAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIV 200 (344)
T ss_dssp HHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEE
Confidence 999877 89 9999999996 99999999999999 99874
No 52
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=100.00 E-value=1.3e-32 Score=249.18 Aligned_cols=172 Identities=26% Similarity=0.266 Sum_probs=148.3
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCC-CCCCCCCCCCccEEEEEEEeCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDVAGVVVKVGTQVK 162 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~-~~~~~p~~~G~e~vG~Vv~vG~~v~ 162 (262)
|||+++++++++ ++++ +.+.|++++|||+|||.+++||++|++.+.|..+. ....+|.++|||++|+|+++|++|+
T Consensus 1 Mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~ 77 (343)
T 2dq4_A 1 MRALAKLAPEEG--LTLV-DRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVR 77 (343)
T ss_dssp CEEEEECSSSSS--CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred CeEEEEeCCCCc--EEEE-eccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCC
Confidence 899999999874 6777 89999999999999999999999999999986431 0135689999999999999999999
Q ss_pred CCCCCCEEEEecCccc------------------cCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHH
Q 024775 163 EFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (262)
Q Consensus 163 ~~~~Gd~V~~~~~~~~------------------~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~a 224 (262)
+|++||+|++.....| ..+....|+|+||++++++.++++|+++++++++.+ ..+.|||++
T Consensus 78 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~ 156 (343)
T 2dq4_A 78 RPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHT 156 (343)
T ss_dssp SSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHH
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHH
Confidence 9999999998532111 112235799999999999999999999999999876 567799999
Q ss_pred HH-HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 225 LE-RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 225 l~-~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
+. ++++ +|++|||+|+ |++|++++|+||.+|+ +|+
T Consensus 157 l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi 193 (343)
T 2dq4_A 157 VYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPIL 193 (343)
T ss_dssp HHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEE
T ss_pred HHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence 98 7889 9999999997 9999999999999999 774
No 53
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=100.00 E-value=3.5e-32 Score=248.65 Aligned_cols=174 Identities=24% Similarity=0.311 Sum_probs=148.5
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~~ 163 (262)
||++.+..++.++.++++ +++.|++++|||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|++|++
T Consensus 15 mk~~~~~~~~~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG~~V~~ 91 (366)
T 1yqd_A 15 VKAFGWAARDQSGHLSPF-NFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF--SMYPLVPGHEIVGEVTEVGSKVKK 91 (366)
T ss_dssp EEEEEEEECSTTCCEEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC--CCSSBCCCCCEEEEEEEECTTCCS
T ss_pred eeEEEEEEcCCCCCcEEE-EccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC--CCCCEecccceEEEEEEECCCCCc
Confidence 555555555555568887 88999999999999999999999999999886543 457899999999999999999999
Q ss_pred CCCCCEEEEecC----cc---c-------c------------CCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccch
Q 024775 164 FKEGDEVYGDIN----EK---A-------L------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLA 217 (262)
Q Consensus 164 ~~~Gd~V~~~~~----~~---~-------~------------~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~ 217 (262)
|++||+|++... .. | + .+....|+|+||+++++..++++|+++++++++.++++
T Consensus 92 ~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~ 171 (366)
T 1yqd_A 92 VNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCA 171 (366)
T ss_dssp CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTH
T ss_pred CCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhh
Confidence 999999986321 00 0 0 01124699999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCC-CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 218 IETAYEGLERTGFS-AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 218 ~~tA~~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+.|||+++++.+++ +|++|||+| +|++|++++|+||.+|++|+
T Consensus 172 ~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi 215 (366)
T 1yqd_A 172 GITVYSPLKYFGLDEPGKHIGIVG-LGGLGHVAVKFAKAFGSKVT 215 (366)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhcCcCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 99999999988888 999999999 69999999999999999874
No 54
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=100.00 E-value=1.1e-32 Score=248.15 Aligned_cols=175 Identities=28% Similarity=0.336 Sum_probs=150.9
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCC
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGT 159 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~ 159 (262)
||++|||+++++++.++.++++ +.+.|++++|||+|||.+++||++|++.++|..+. ...+|.++|||++|+|+++
T Consensus 1 m~~~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~E~~G~V~~~-- 76 (330)
T 1tt7_A 1 MSTLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNI-VREYPLILGIDAAGTVVSS-- 76 (330)
T ss_dssp -CCEEEEEEECCGGGSCCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTT-CSSCSEECCSEEEEEEEEC--
T ss_pred CCCcceEEEEecCCCCcceeEe-ecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCC-cCCCCccccceEEEEEEEc--
Confidence 5678999999998855557777 89999999999999999999999999999886542 2457899999999999996
Q ss_pred CCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH---HcCCCCCC-E
Q 024775 160 QVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE---RTGFSAGK-S 235 (262)
Q Consensus 160 ~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~---~~~~~~g~-~ 235 (262)
++++|++||+|++.... .+....|+|+||++++++.++++|+++++++++.+++++.|||.++. +.++++|+ +
T Consensus 77 ~v~~~~vGdrV~~~~~~---~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~ 153 (330)
T 1tt7_A 77 NDPRFAEGDEVIATSYE---LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGS 153 (330)
T ss_dssp SSTTCCTTCEEEEESTT---BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred CCCCCCCCCEEEEcccc---cCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCce
Confidence 46789999999986421 12234699999999999999999999999999999999999998874 46899997 9
Q ss_pred EEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 236 ILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 236 VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|||+|++|++|++++|+||.+|++|+
T Consensus 154 VlV~Ga~G~vG~~~~q~a~~~Ga~vi 179 (330)
T 1tt7_A 154 VLVTGATGGVGGIAVSMLNKRGYDVV 179 (330)
T ss_dssp EEEESTTSHHHHHHHHHHHHHTCCEE
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEE
Confidence 99999889999999999999999874
No 55
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=100.00 E-value=5.9e-32 Score=248.35 Aligned_cols=175 Identities=18% Similarity=0.238 Sum_probs=150.0
Q ss_pred CcccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeC
Q 024775 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 79 ~~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG 158 (262)
.|--+||++++++++ +.++++ +.+.|+|++|||||||.+++||++|++.++|.++. ..+|.++|||++|+|+++|
T Consensus 13 ~~~~~mka~~~~~~g--~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~P~v~GhE~~G~V~~vG 87 (380)
T 1vj0_A 13 MMGLKAHAMVLEKFN--QPLVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR--VPLPIILGHEGAGRVVEVN 87 (380)
T ss_dssp -CCEEEEEEEBCSTT--SCCEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT--CCSSBCCCCEEEEEEEEES
T ss_pred HhhhheEEEEEecCC--CCeEEE-EccCCCCCCCEEEEEEeEEeecccchHHhcCCCCC--CCCCcccCcCcEEEEEEeC
Confidence 467789999999998 237777 88999999999999999999999999999986542 4578999999999999999
Q ss_pred CCCC------CCCCCCEEEEecCccc------c-------------CCC--------CCCCceeeEEEe-cCCCeEECCC
Q 024775 159 TQVK------EFKEGDEVYGDINEKA------L-------------EGP--------KQFGSLAEYTAV-EERLLAPKPK 204 (262)
Q Consensus 159 ~~v~------~~~~Gd~V~~~~~~~~------~-------------~~~--------~~~G~~ae~~~v-~~~~~~~lP~ 204 (262)
+|+ +|++||+|++.....| . .+. ...|+|+||+++ +++.++++|+
T Consensus 88 -~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~ 166 (380)
T 1vj0_A 88 -GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSE 166 (380)
T ss_dssp -SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECT
T ss_pred -CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCC
Confidence 999 9999999998632111 0 121 236999999999 9999999999
Q ss_pred CCCHh-hHhcccchHHHHHHHHHHcC-CCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 205 NLDFV-QAAGLPLAIETAYEGLERTG-FSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 205 ~~~~~-~aa~l~~~~~tA~~al~~~~-~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
+++++ +++++. ++.|||+++++++ +++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus 167 ~l~~~~~Aa~~~-~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi 224 (380)
T 1vj0_A 167 KDDLDVLAMAMC-SGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVI 224 (380)
T ss_dssp TSCHHHHHHHTT-HHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEE
T ss_pred CCChHHhHhhhc-HHHHHHHHHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEE
Confidence 99999 666555 9999999998889 99999999999 99999999999999994 774
No 56
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=100.00 E-value=6.2e-32 Score=245.05 Aligned_cols=174 Identities=30% Similarity=0.416 Sum_probs=151.2
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCC------CCCCCCCCCCccEEEEEEEe
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA------TDSPLPTVPGYDVAGVVVKV 157 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~------~~~~~p~~~G~e~vG~Vv~v 157 (262)
|||+++++++.. ++++ +.+.|++++|||+|||.+++||++|++.++|.++. ....+|.++|||++|+|+++
T Consensus 1 Mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 77 (347)
T 1jvb_A 1 MRAVRLVEIGKP--LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV 77 (347)
T ss_dssp CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred CeEEEEecCCCC--eEEE-EeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEE
Confidence 899999998743 6677 88999999999999999999999999999886541 12457899999999999999
Q ss_pred CCCCCCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEEecC-CCeEECCCCCCHhhHhcccchH
Q 024775 158 GTQVKEFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEE-RLLAPKPKNLDFVQAAGLPLAI 218 (262)
Q Consensus 158 G~~v~~~~~Gd~V~~~~~~~~------------------~~~~~~~G~~ae~~~v~~-~~~~~lP~~~~~~~aa~l~~~~ 218 (262)
|++|++|++||+|++.....| ..+....|+|+||+++++ +.++++ +++++++++.+++++
T Consensus 78 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~ 156 (347)
T 1jvb_A 78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSG 156 (347)
T ss_dssp CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHH
T ss_pred CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhH
Confidence 999999999999977532111 112234699999999999 999999 999999999999999
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHc-CCccC
Q 024775 219 ETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYY-LEFFF 261 (262)
Q Consensus 219 ~tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~-Ga~V~ 261 (262)
.|||++++++++++|++|||+|++|++|++++|+|+.. |++|+
T Consensus 157 ~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi 200 (347)
T 1jvb_A 157 ITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATII 200 (347)
T ss_dssp HHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEE
Confidence 99999998899999999999998779999999999999 99874
No 57
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=100.00 E-value=4.1e-32 Score=250.68 Aligned_cols=171 Identities=22% Similarity=0.290 Sum_probs=148.1
Q ss_pred ceeEEEEcccCCcceEEEEeeecCCCC-CC-----CeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEE
Q 024775 83 EMKAWLYGEYGGVDVLKFDEKVTVPQV-KE-----DQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVK 156 (262)
Q Consensus 83 ~~ka~v~~~~g~~~~l~~~~~~~~p~~-~~-----~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~ 156 (262)
+|||+++++++. ++++ +++.|++ ++ |||+|||.+++||++|++.++|..+ .++|.++|||++|+|++
T Consensus 2 ~MkA~~~~~~~~---l~~~-~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~---~~~p~v~GhE~~G~V~~ 74 (398)
T 2dph_A 2 GNKSVVYHGTRD---LRVE-TVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI---VPKGHVLGHEITGEVVE 74 (398)
T ss_dssp CEEEEEEEETTE---EEEE-EECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC---CCTTCBCCCCEEEEEEE
T ss_pred ccEEEEEEcCCC---EEEE-EccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC---CCCCcccCCceEEEEEE
Confidence 599999998764 7777 8899987 68 9999999999999999999998643 46789999999999999
Q ss_pred eCCCCCCCCCCCEEEEecCcccc--------------------------CC---CCCCCceeeEEEecCC--CeEECCCC
Q 024775 157 VGTQVKEFKEGDEVYGDINEKAL--------------------------EG---PKQFGSLAEYTAVEER--LLAPKPKN 205 (262)
Q Consensus 157 vG~~v~~~~~Gd~V~~~~~~~~~--------------------------~~---~~~~G~~ae~~~v~~~--~~~~lP~~ 205 (262)
+|++|+.|++||+|++.....|. .+ ....|+|+||++++++ .++++|++
T Consensus 75 vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~ 154 (398)
T 2dph_A 75 KGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDK 154 (398)
T ss_dssp ECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSH
T ss_pred ECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCC
Confidence 99999999999999975321110 01 1246999999999987 89999999
Q ss_pred CCHhh----HhcccchHHHHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 206 LDFVQ----AAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 206 ~~~~~----aa~l~~~~~tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
+++++ ++.++.++.|||++++++++++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus 155 ~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi 214 (398)
T 2dph_A 155 EQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAG-AGPVGRCAAAGARLLGAACVI 214 (398)
T ss_dssp HHHHHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEE
T ss_pred CChhhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEE
Confidence 99988 888899999999999889999999999999 59999999999999999 664
No 58
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=99.98 E-value=7.2e-32 Score=242.56 Aligned_cols=173 Identities=29% Similarity=0.396 Sum_probs=150.2
Q ss_pred cceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCC
Q 024775 82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQV 161 (262)
Q Consensus 82 ~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v 161 (262)
++||++++++++.++.++++ +.+.|++++|||+|||.+++||++|++.++|..+.. ..+|.++|||++|+|+++ ++
T Consensus 2 ~~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~G~E~~G~V~~~--~v 77 (328)
T 1xa0_A 2 SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIV-KTYPFVPGIDLAGVVVSS--QH 77 (328)
T ss_dssp CEEEEEEEEEETTEEEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSC-CSSSBCCCSEEEEEEEEC--CS
T ss_pred CcceEEEEecCCCcceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCC-CCCCcccCcceEEEEEec--CC
Confidence 36999999999876668888 899999999999999999999999999998865422 457899999999999996 57
Q ss_pred CCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH---HcCCCCCC-EEE
Q 024775 162 KEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE---RTGFSAGK-SIL 237 (262)
Q Consensus 162 ~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~---~~~~~~g~-~Vl 237 (262)
+.|++||+|++.... .+....|+|+||++++++.++++|+++++++++.+++++.|||.++. +.++++|+ +||
T Consensus 78 ~~~~vGdrV~~~~~~---~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~Vl 154 (328)
T 1xa0_A 78 PRFREGDEVIATGYE---IGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVL 154 (328)
T ss_dssp SSCCTTCEEEEESTT---BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEE
T ss_pred CCCCCCCEEEEcccc---CCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEE
Confidence 889999999986421 12234699999999999999999999999999999999999998873 56899997 999
Q ss_pred EEcCchHHHHHHHHHHHHcCCccC
Q 024775 238 VLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 238 I~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|+|++|++|++++|+||.+|++|+
T Consensus 155 V~Ga~G~vG~~~~q~a~~~Ga~vi 178 (328)
T 1xa0_A 155 VTGATGGVGSLAVSMLAKRGYTVE 178 (328)
T ss_dssp ESSTTSHHHHHHHHHHHHTTCCEE
T ss_pred EecCCCHHHHHHHHHHHHCCCEEE
Confidence 999889999999999999999874
No 59
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=99.98 E-value=7.1e-32 Score=248.88 Aligned_cols=170 Identities=22% Similarity=0.305 Sum_probs=146.5
Q ss_pred ceeEEEEcccCCcceEEEEeeecCCCCC-CCe------EEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEE
Q 024775 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQ------VLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVV 155 (262)
Q Consensus 83 ~~ka~v~~~~g~~~~l~~~~~~~~p~~~-~~e------VlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv 155 (262)
+|||+++.+++. ++++ +.+.|++. ++| |||||.+++||++|++.++|..+ .++|.++|||++|+|+
T Consensus 2 ~Mka~~~~~~~~---l~~~-~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~p~v~GhE~~G~V~ 74 (398)
T 1kol_A 2 GNRGVVYLGSGK---VEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT---AQVGLVLGHEITGEVI 74 (398)
T ss_dssp CEEEEEEEETTE---EEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC---CCTTCBCCCCEEEEEE
T ss_pred ccEEEEEecCCc---eEEE-EecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC---CCCCcccCcccEEEEE
Confidence 599999998764 7777 89999997 888 99999999999999999998643 4568999999999999
Q ss_pred EeCCCCCCCCCCCEEEEecCccc-------------c-----------CCC----CCCCceeeEEEecCC--CeEECCCC
Q 024775 156 KVGTQVKEFKEGDEVYGDINEKA-------------L-----------EGP----KQFGSLAEYTAVEER--LLAPKPKN 205 (262)
Q Consensus 156 ~vG~~v~~~~~Gd~V~~~~~~~~-------------~-----------~~~----~~~G~~ae~~~v~~~--~~~~lP~~ 205 (262)
++|++|++|++||+|++.....| | .+. ...|+|+||+++++. .++++|++
T Consensus 75 ~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~ 154 (398)
T 1kol_A 75 EKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDR 154 (398)
T ss_dssp EECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCH
T ss_pred EECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCC
Confidence 99999999999999986421111 0 011 246999999999986 89999999
Q ss_pred CCHhh----HhcccchHHHHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-cc
Q 024775 206 LDFVQ----AAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FF 260 (262)
Q Consensus 206 ~~~~~----aa~l~~~~~tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V 260 (262)
+++++ ++.++.++.|||++++++++++|++|||+| +|++|++++|+||.+|+ +|
T Consensus 155 ~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~V 213 (398)
T 1kol_A 155 DKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVV 213 (398)
T ss_dssp HHHHHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEE
T ss_pred cchhhhcccccccccHHHHHHHHHHHcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCeE
Confidence 98887 788899999999999989999999999999 69999999999999999 45
No 60
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=99.97 E-value=2.5e-31 Score=246.05 Aligned_cols=177 Identities=21% Similarity=0.267 Sum_probs=144.9
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCC-CCCCeEEEEEEEEecChhhHHhHcCCCCC-----CCCCCCCCCCccEEEE
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQ-VKEDQVLIKVVAAALNPVDGKRRQGKFKA-----TDSPLPTVPGYDVAGV 153 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~-~~~~eVlVkV~a~~i~~sD~~~~~g~~~~-----~~~~~p~~~G~e~vG~ 153 (262)
.|.+|+++++...+ .++++ +++.|+ +++|||||||.+++||++|++.+.|.... ...++|.++|||++|+
T Consensus 27 ~~~~m~a~~~~~~~---~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~ 102 (404)
T 3ip1_A 27 GKLTWLGSKVWRYP---EVRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGV 102 (404)
T ss_dssp TTBBSCGGGTEEEE---EEEEE-EECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEE
T ss_pred hhhhcceEEEEeCC---ceEEE-EcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEE
Confidence 34445555554444 47887 999999 99999999999999999999999864211 1246789999999999
Q ss_pred EEEeCCCC------CCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEEecCCCeEECCCCCC--
Q 024775 154 VVKVGTQV------KEFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLD-- 207 (262)
Q Consensus 154 Vv~vG~~v------~~~~~Gd~V~~~~~~~~------------------~~~~~~~G~~ae~~~v~~~~~~~lP~~~~-- 207 (262)
|+++|++| +.|++||+|++.....| ..+....|+|+||++++++.++++|+.++
T Consensus 103 V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~ 182 (404)
T 3ip1_A 103 VVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVY 182 (404)
T ss_dssp EEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTB
T ss_pred EEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEecccccccc
Confidence 99999999 89999999998532111 12334579999999999999999999875
Q ss_pred ----HhhHhcccchHHHHHHHHH-H-cCCCCCCEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 208 ----FVQAAGLPLAIETAYEGLE-R-TGFSAGKSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 208 ----~~~aa~l~~~~~tA~~al~-~-~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
+.++++++.++.|||+++. + +++++|++|||+|+ |++|++++|+||.+|+ +|+
T Consensus 183 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi 242 (404)
T 3ip1_A 183 EGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVI 242 (404)
T ss_dssp CTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEE
T ss_pred ccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence 4568888999999999995 3 48999999999995 9999999999999999 653
No 61
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=99.97 E-value=1.3e-31 Score=243.89 Aligned_cols=168 Identities=21% Similarity=0.199 Sum_probs=144.4
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCC---CCCCCccEEEEEEEeCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPL---PTVPGYDVAGVVVKVGTQ 160 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~---p~~~G~e~vG~Vv~vG~~ 160 (262)
|||++++++++. ++++ +.+.|++++|||||||.+++||++|++.++|.++. .++ |.++|||++| |+++|++
T Consensus 1 MkA~~~~~~~~~--l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~~~p~v~G~E~~G-V~~vG~~ 74 (357)
T 2b5w_A 1 MKAIAVKRGEDR--PVVI-EKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG--FPEGEDHLVLGHEAVG-VVVDPND 74 (357)
T ss_dssp CEEEEEETTCSS--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT--SCTTCSEEECCSEEEE-EEEECTT
T ss_pred CeEEEEeCCCCc--eEEE-ECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC--CCCCCCCcccCceeEE-EEEECCC
Confidence 899999998872 6666 88999999999999999999999999999987543 345 8899999999 9999999
Q ss_pred CCCCCCCCEEEEecCcc--c-------------cC-------CC-CCCCceeeEEEecCCCeEECCCCCCHhhHhcccch
Q 024775 161 VKEFKEGDEVYGDINEK--A-------------LE-------GP-KQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLA 217 (262)
Q Consensus 161 v~~~~~Gd~V~~~~~~~--~-------------~~-------~~-~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~ 217 (262)
++|++||+|++..... | +. +. ...|+|+||++++++.++++|++++ ++ ++++.+
T Consensus 75 -~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-aal~~~ 151 (357)
T 2b5w_A 75 -TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-GFLIEP 151 (357)
T ss_dssp -SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TT-GGGHHH
T ss_pred -CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hh-hhhhch
Confidence 9999999999863211 1 00 11 2369999999999999999999999 54 557789
Q ss_pred HHHHHHHHHHcCCCCC------CEEEEEcCchHHHHHH-HHHH-HHcCCc-cC
Q 024775 218 IETAYEGLERTGFSAG------KSILVLNGSGGVGSLV-IQVC-YYYLEF-FF 261 (262)
Q Consensus 218 ~~tA~~al~~~~~~~g------~~VlI~Ga~G~vG~~a-iqlA-k~~Ga~-V~ 261 (262)
+.|||++++++++++| ++|||+|+ |++|+++ +|+| |.+|++ |+
T Consensus 152 ~~ta~~al~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi 203 (357)
T 2b5w_A 152 ISITEKALEHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLY 203 (357)
T ss_dssp HHHHHHHHHHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEE
T ss_pred HHHHHHHHHhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEE
Confidence 9999999988889999 99999997 9999999 9999 999997 64
No 62
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=99.97 E-value=9e-31 Score=236.12 Aligned_cols=163 Identities=20% Similarity=0.189 Sum_probs=141.8
Q ss_pred ccceeEEEEccc--C--CcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCcc----EEE
Q 024775 81 PSEMKAWLYGEY--G--GVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYD----VAG 152 (262)
Q Consensus 81 p~~~ka~v~~~~--g--~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e----~vG 152 (262)
+.+||+|++++. | .++.++++ +.+.|+|++|||+|||.+++||++|++.+.+... ..+|.++||| ++|
T Consensus 5 ~~~mka~v~~~~~~g~~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~---~~~p~~~G~e~g~~~~G 80 (336)
T 4b7c_A 5 SQINRQYQLAQRPSGLPGRDTFSFV-ETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS---YIPPVGIGEVMRALGVG 80 (336)
T ss_dssp -CEEEEEEECSCCSSSCCTTSEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC---SSCCCCTTSBCCCEEEE
T ss_pred cccccEEEEEecCCCCCCCCceEEE-eccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc---cCCCCCCCcccCCceEE
Confidence 366999999862 3 34668888 9999999999999999999999999998876432 2345666766 899
Q ss_pred EEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhH--hcccchHHHHHHHH-HHcC
Q 024775 153 VVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQA--AGLPLAIETAYEGL-ERTG 229 (262)
Q Consensus 153 ~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~a--a~l~~~~~tA~~al-~~~~ 229 (262)
+|++. +++.|++||+|++ .|+|+||++++++.++++|+++++.++ +.+++++.|||+++ +..+
T Consensus 81 ~V~~~--~v~~~~vGdrV~~------------~G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~ 146 (336)
T 4b7c_A 81 KVLVS--KHPGFQAGDYVNG------------ALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQ 146 (336)
T ss_dssp EEEEE--CSTTCCTTCEEEE------------ECCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTC
T ss_pred EEEec--CCCCCCCCCEEec------------cCCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcC
Confidence 99994 5889999999997 489999999999999999999977776 77899999999999 5689
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+++|++|||+|++|++|++++|+|+..|++|+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi 178 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVV 178 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE
Confidence 99999999999889999999999999999875
No 63
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=99.97 E-value=1.1e-31 Score=246.41 Aligned_cols=168 Identities=21% Similarity=0.195 Sum_probs=148.2
Q ss_pred cccceeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCC----------------------
Q 024775 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA---------------------- 137 (262)
Q Consensus 80 ~p~~~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~---------------------- 137 (262)
.+..||++++... ...++++ +.+.|++++|||||||.+++||++|++.++|..+.
T Consensus 4 ~~~~mka~v~~~~--~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~ 80 (379)
T 3iup_A 4 SALQLRSRIKSSG--ELELSLD-SIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGA 80 (379)
T ss_dssp EEEEEEEEECTTS--EEEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHH
T ss_pred chhhHHHHHhcCC--CCceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccc
Confidence 4677999987532 2348888 89999999999999999999999999999885310
Q ss_pred -----CCCCCCCCCCccEEEEEEEeCCCC-CCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhH
Q 024775 138 -----TDSPLPTVPGYDVAGVVVKVGTQV-KEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQA 211 (262)
Q Consensus 138 -----~~~~~p~~~G~e~vG~Vv~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~a 211 (262)
...++|.++|||++|+|+++|++| ++|++||+|++.. .|+|+||++++++.++++|++++++++
T Consensus 81 ~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~----------~G~~aey~~v~~~~~~~iP~~~~~~~a 150 (379)
T 3iup_A 81 MRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG----------GAMYSQYRCIPADQCLVLPEGATPADG 150 (379)
T ss_dssp HHHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC----------SCCSBSEEEEEGGGEEECCTTCCHHHH
T ss_pred ccccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC----------CCcceeEEEeCHHHeEECCCCCCHHHH
Confidence 013568899999999999999999 8999999999865 599999999999999999999999999
Q ss_pred hcccchHHHHHHHHHHcCCCCCCEEEEEc-CchHHHHHHHHHHHHcCCccC
Q 024775 212 AGLPLAIETAYEGLERTGFSAGKSILVLN-GSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 212 a~l~~~~~tA~~al~~~~~~~g~~VlI~G-a~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+.+++...|||+++++.. ++|++|||+| |+|++|++++|+||.+|++|+
T Consensus 151 a~l~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi 200 (379)
T 3iup_A 151 ASSFVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLV 200 (379)
T ss_dssp TTSSHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEE
T ss_pred HhhhhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEE
Confidence 999999999999887766 9999999996 799999999999999999875
No 64
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=99.97 E-value=1.1e-30 Score=237.59 Aligned_cols=168 Identities=17% Similarity=0.223 Sum_probs=145.1
Q ss_pred CcccceeEEEE-ccc---CCc--ceEEEEeeecCCCC-CCCeEEEEEEEEecChhhHHhHcCCC---CCCCCCCCCCCCc
Q 024775 79 TVPSEMKAWLY-GEY---GGV--DVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKF---KATDSPLPTVPGY 148 (262)
Q Consensus 79 ~~p~~~ka~v~-~~~---g~~--~~l~~~~~~~~p~~-~~~eVlVkV~a~~i~~sD~~~~~g~~---~~~~~~~p~~~G~ 148 (262)
.+|.+||++++ +++ |.+ +.++++ +.+.|++ ++|||+|||.+++||++|++.+.+.. ...+.++|.++||
T Consensus 4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~ 82 (357)
T 2zb4_A 4 AAAMIVQRVVLNSRPGKNGNPVAENFRME-EVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDG 82 (357)
T ss_dssp --CCEEEEEEECCCCCTTSCCCGGGEEEE-EEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEE
T ss_pred cccccceEEEEeccCCCCCCCCcCceEEE-eecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccc
Confidence 46788999999 565 544 668888 8999999 99999999999999999998877521 1112457899999
Q ss_pred cEEEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCC-----CHhhHhcccchHHHHHH
Q 024775 149 DVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNL-----DFVQAAGLPLAIETAYE 223 (262)
Q Consensus 149 e~vG~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~-----~~~~aa~l~~~~~tA~~ 223 (262)
|++|+|++ ++|++|++||+|++. .|+|+||++++++.++++|+++ +++ +++++.++.|||+
T Consensus 83 E~~G~V~~--~~v~~~~vGdrV~~~-----------~G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~ 148 (357)
T 2zb4_A 83 GGIGIIEE--SKHTNLTKGDFVTSF-----------YWPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLI 148 (357)
T ss_dssp EEEEEEEE--ECSTTCCTTCEEEEE-----------EEESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHH
T ss_pred cEEEEEEe--cCCCCCCCCCEEEec-----------CCCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHH
Confidence 99999999 889999999999985 3799999999999999999998 555 6778899999999
Q ss_pred HH-HHcCCCCC--CEEEEEcCchHHHHHHHHHHHHcCC-ccC
Q 024775 224 GL-ERTGFSAG--KSILVLNGSGGVGSLVIQVCYYYLE-FFF 261 (262)
Q Consensus 224 al-~~~~~~~g--~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V~ 261 (262)
++ +..++++| ++|||+|++|++|++++|+|+..|+ +|+
T Consensus 149 al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi 190 (357)
T 2zb4_A 149 GIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVV 190 (357)
T ss_dssp HHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEE
Confidence 99 57899999 9999999889999999999999999 774
No 65
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=99.97 E-value=1.1e-29 Score=226.02 Aligned_cols=153 Identities=32% Similarity=0.462 Sum_probs=138.3
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCCC
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~~ 163 (262)
|||++++++++++.+ + +.+.|++++|||+|||.+++||++|++.+.|.++.. .++|.++|||++|+|+
T Consensus 1 Mka~~~~~~g~~~~l--~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~i~G~e~~G~V~-------- 68 (302)
T 1iz0_A 1 MKAWVLKRLGGPLEL--V-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTR-LHPPFIPGMEVVGVVE-------- 68 (302)
T ss_dssp CEEEEECSTTSCEEE--E-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC-CCSSBCCCCEEEEEET--------
T ss_pred CeEEEEcCCCCchhe--E-ECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC-CCCCCcccceEEEEEE--------
Confidence 899999999887544 3 788899999999999999999999999999866532 3578999999999997
Q ss_pred CCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEcCc
Q 024775 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGS 242 (262)
Q Consensus 164 ~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~Ga~ 242 (262)
||+|++... .|+|+||++++++.++++|++++++++++++.++.|||+++. .. +++|++|||+|++
T Consensus 69 ---GdrV~~~~~---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~ 135 (302)
T 1iz0_A 69 ---GRRYAALVP---------QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAA 135 (302)
T ss_dssp ---TEEEEEECS---------SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTT
T ss_pred ---CcEEEEecC---------CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCC
Confidence 999998752 699999999999999999999999999999999999999997 46 9999999999988
Q ss_pred hHHHHHHHHHHHHcCCccC
Q 024775 243 GGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 243 G~vG~~aiqlAk~~Ga~V~ 261 (262)
|++|++++|+|+.+|++|+
T Consensus 136 G~vG~~~~~~a~~~Ga~Vi 154 (302)
T 1iz0_A 136 GALGTAAVQVARAMGLRVL 154 (302)
T ss_dssp BHHHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHCCCEEE
Confidence 9999999999999999874
No 66
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=99.97 E-value=6.1e-30 Score=254.76 Aligned_cols=193 Identities=23% Similarity=0.272 Sum_probs=162.4
Q ss_pred ceecccCCCCCCCCcccccccccccCCCCCCCCCCCCCcccceeEEEEcccCCcceEEEEeeec--CCCCCCCeEEEEEE
Q 024775 42 KVTTLKQGSFSYLPLGVQASASQAAASSTEAEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVT--VPQVKEDQVLIKVV 119 (262)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ka~v~~~~g~~~~l~~~~~~~--~p~~~~~eVlVkV~ 119 (262)
..++..+++....||....... . ... ........+.+..+|.++.|+++ +.+ .|++++|||+|||.
T Consensus 179 E~E~a~r~G~~~V~Rl~~~~~~---~---~~~-----~~~~~~~~l~~~~~G~~~~L~~~-~~~~p~~~~~~~eVlV~V~ 246 (795)
T 3slk_A 179 EPQLALRRGGAHAPRLAGLGSD---D---VLP-----VPDGTGWRLEATRPGSLDGLALV-DEPTATAPLGDGEVRIAMR 246 (795)
T ss_dssp CSEEEECSSCEECCEEEESCSS---C---CCC-----CCCSSSCCEEESSTTSSTTEEEC-CCHHHHSCCCSSEEEEEEE
T ss_pred CceEEEECCcEEEeeeeccccc---c---ccC-----CCCCceEEEecCCCCCccceEEE-eCCccCCCCCCCEEEEEEE
Confidence 4466777777777776632211 0 000 11223456777888988889998 665 46789999999999
Q ss_pred EEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCe
Q 024775 120 AAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLL 199 (262)
Q Consensus 120 a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~ 199 (262)
++|||++|++.+.|.++. |.++|||++|+|+++|++|++|++||+|+++. .|+|+||+++++..+
T Consensus 247 a~gin~~D~~~~~G~~~~-----~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~----------~G~~ae~~~v~~~~~ 311 (795)
T 3slk_A 247 AAGVNFRDALIALGMYPG-----VASLGSEGAGVVVETGPGVTGLAPGDRVMGMI----------PKAFGPLAVADHRMV 311 (795)
T ss_dssp EEEECHHHHHHTTTCCSS-----CCCSCCCEEEEEEEECSSCCSSCTTCEEEECC----------SSCSSSEEEEETTSE
T ss_pred EEccCHHHHHHHcCCCCC-----CccccceeEEEEEEeCCCCCcCCCCCEEEEEe----------cCCCcCEEEeehHHE
Confidence 999999999999987643 46799999999999999999999999999875 599999999999999
Q ss_pred EECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 200 APKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 200 ~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+++|+++++++++.+++++.|||+++. .+++++|++|||+|++|++|++++|+||.+|++|+
T Consensus 312 ~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~ 374 (795)
T 3slk_A 312 TRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVY 374 (795)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEE
T ss_pred EECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEE
Confidence 999999999999999999999999985 58999999999999999999999999999999886
No 67
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=99.96 E-value=7.1e-30 Score=233.17 Aligned_cols=167 Identities=19% Similarity=0.254 Sum_probs=139.8
Q ss_pred eeEEEEcccCCcceEEEEeeecCCCCCC-CeEEEEEEEEecChhhHHhHcC--CCCCCCCCC---CCCCCccEEEEEEEe
Q 024775 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKE-DQVLIKVVAAALNPVDGKRRQG--KFKATDSPL---PTVPGYDVAGVVVKV 157 (262)
Q Consensus 84 ~ka~v~~~~g~~~~l~~~~~~~~p~~~~-~eVlVkV~a~~i~~sD~~~~~g--~~~~~~~~~---p~~~G~e~vG~Vv~v 157 (262)
|||++++++++. ++++ +.+.|++++ |||+|||.+++||++|++.++| .++. .++ |.++|||++|+|++
T Consensus 1 MkA~~~~~~g~~--l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~--~~~~~~p~v~G~E~~G~V~~- 74 (366)
T 2cdc_A 1 MKAIIVKPPNAG--VQVK-DVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLST--LPKGKDFLVLGHEAIGVVEE- 74 (366)
T ss_dssp CEEEEECTTSCC--CEEE-ECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC---------CCSCEECCSEEEEEECS-
T ss_pred CeEEEEeCCCCc--eEEE-ECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCC--CCcCCCCCcCCcceEEEEEe-
Confidence 899999998873 6777 889999999 9999999999999999999998 5432 345 89999999999999
Q ss_pred CCCCCCCCCCCEEEEecCccc-------------cC-------CCC-CCCceeeEEEecCCCeEECCCCCCHhhHhcccc
Q 024775 158 GTQVKEFKEGDEVYGDINEKA-------------LE-------GPK-QFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPL 216 (262)
Q Consensus 158 G~~v~~~~~Gd~V~~~~~~~~-------------~~-------~~~-~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~ 216 (262)
++ ++|++||+|++.....| +. +.. ..|+|+||++++++.++++|++++ ++|+ ++.
T Consensus 75 -~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~~ 150 (366)
T 2cdc_A 75 -SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LAQ 150 (366)
T ss_dssp -CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GHH
T ss_pred -CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hcC
Confidence 67 89999999998542111 00 222 469999999999999999999999 7764 778
Q ss_pred hHHHHHHHHH-----HcCCC--C-------CCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 217 AIETAYEGLE-----RTGFS--A-------GKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 217 ~~~tA~~al~-----~~~~~--~-------g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++.|||+++. +.+++ + |++|||+|+ |++|++++|+|+.+|++|+
T Consensus 151 ~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi 208 (366)
T 2cdc_A 151 PLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVW 208 (366)
T ss_dssp HHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEE
T ss_pred cHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEE
Confidence 8999999998 78888 8 999999997 9999999999999999874
No 68
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=99.96 E-value=7.4e-28 Score=216.76 Aligned_cols=160 Identities=20% Similarity=0.213 Sum_probs=136.4
Q ss_pred ccceeEEEEccc--CC--cceEEEEeeecCCCCCCCeEEEEEEEEecChhhHHhHcCCCCCCCCCCCCCCCccEEEEEEE
Q 024775 81 PSEMKAWLYGEY--GG--VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVK 156 (262)
Q Consensus 81 p~~~ka~v~~~~--g~--~~~l~~~~~~~~p~~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~~~~p~~~G~e~vG~Vv~ 156 (262)
+.+||+|++.++ |. ++.++++ +.+.|++++|||+|||.+++||+.|.. +.. +.++|.++|||++|+|++
T Consensus 5 ~~~mka~~~~~~~~g~~~~~~l~~~-e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~~-----~~~~p~~~g~e~~G~Vv~ 77 (333)
T 1v3u_A 5 MVKAKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRI-ASK-----RLKEGAVMMGQQVARVVE 77 (333)
T ss_dssp CCEEEEEEECC-----CCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHH-HTT-----TCCTTSBCCCCEEEEEEE
T ss_pred cccccEEEEeecCCCCCCccceEEE-eCCCCCCCCCEEEEEEEEeccCHHHcc-ccC-----cCCCCcccccceEEEEEe
Confidence 446999999986 43 3668888 899999999999999999999999873 221 234678999999999999
Q ss_pred eCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCC----CCHhh-HhcccchHHHHHHHHH-HcCC
Q 024775 157 VGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKN----LDFVQ-AAGLPLAIETAYEGLE-RTGF 230 (262)
Q Consensus 157 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~----~~~~~-aa~l~~~~~tA~~al~-~~~~ 230 (262)
. ++++|++||+|++ .|+|+||++++++.++++|++ +++++ ++++++++.|||+++. ..++
T Consensus 78 ~--~v~~~~vGdrV~~------------~g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~ 143 (333)
T 1v3u_A 78 S--KNSAFPAGSIVLA------------QSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGV 143 (333)
T ss_dssp E--SCTTSCTTCEEEE------------CCCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCC
T ss_pred c--CCCCCCCCCEEEe------------cCceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCC
Confidence 5 5788999999998 478999999999999999997 88887 4788999999999994 5899
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++|++|||+|++|++|++++|+++..|++|+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~ 174 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVV 174 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEE
Confidence 9999999999889999999999999999874
No 69
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=99.95 E-value=6.2e-28 Score=218.14 Aligned_cols=168 Identities=22% Similarity=0.301 Sum_probs=137.4
Q ss_pred cccceeEEEEccc--CCcc--eEEEEe-eecCCC-CCCCeEEEEEEEEecChhhHHhHcCCCCCCC--CCCCCCCCccEE
Q 024775 80 VPSEMKAWLYGEY--GGVD--VLKFDE-KVTVPQ-VKEDQVLIKVVAAALNPVDGKRRQGKFKATD--SPLPTVPGYDVA 151 (262)
Q Consensus 80 ~p~~~ka~v~~~~--g~~~--~l~~~~-~~~~p~-~~~~eVlVkV~a~~i~~sD~~~~~g~~~~~~--~~~p~~~G~e~v 151 (262)
||.+||+|++... +.+. .+++++ +.+.|. +++|||||||.++++|+.|. .+.|...... ..+|+++|||++
T Consensus 1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~ 79 (345)
T 2j3h_A 1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ 79 (345)
T ss_dssp CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence 5778999999886 5444 577752 567776 89999999999999998885 3444332110 235789999999
Q ss_pred EEEEE--eCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCC--eEECCC---CCCHhhHhcccchHHHHHHH
Q 024775 152 GVVVK--VGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERL--LAPKPK---NLDFVQAAGLPLAIETAYEG 224 (262)
Q Consensus 152 G~Vv~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~--~~~lP~---~~~~~~aa~l~~~~~tA~~a 224 (262)
|++++ ||+++++|++||+|++ .|+|+||+++++.. ++++|+ .++++ ++++++++.|||++
T Consensus 80 G~~~~GvV~~~v~~~~vGdrV~~------------~g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~a 146 (345)
T 2j3h_A 80 GYGVSRIIESGHPDYKKGDLLWG------------IVAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAG 146 (345)
T ss_dssp EEEEEEEEEECSTTCCTTCEEEE------------EEESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHH
T ss_pred cceEEEEEecCCCCCCCCCEEEe------------ecCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHH
Confidence 99999 9999999999999987 37899999999876 999996 35555 67788899999999
Q ss_pred HH-HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 225 LE-RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 225 l~-~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+. .+++++|++|||+|++|++|++++|+|+..|++|+
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~ 184 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVV 184 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE
Confidence 95 58999999999999889999999999999999875
No 70
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.82 E-value=4.4e-20 Score=201.30 Aligned_cols=155 Identities=23% Similarity=0.250 Sum_probs=131.4
Q ss_pred EEEcccCCcceEEEEeeecCCC-C--CCCeEEEEEEEEecChhhHHhHcCCCCCC-----CCCCCCCCCccEEEEEEEeC
Q 024775 87 WLYGEYGGVDVLKFDEKVTVPQ-V--KEDQVLIKVVAAALNPVDGKRRQGKFKAT-----DSPLPTVPGYDVAGVVVKVG 158 (262)
Q Consensus 87 ~v~~~~g~~~~l~~~~~~~~p~-~--~~~eVlVkV~a~~i~~sD~~~~~g~~~~~-----~~~~p~~~G~e~vG~Vv~vG 158 (262)
+....+|..+.+.|. +.+... + .++||+|+|.++|+|+.|++.+.|..+.. ....|.++|+|++|+|.
T Consensus 1533 l~~~~~g~l~sl~~~-~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~--- 1608 (2512)
T 2vz8_A 1533 VNVLSRGDLSSIRWV-CSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA--- 1608 (2512)
T ss_dssp EEESSTTCTTSEEEE-ECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET---
T ss_pred EEccCCCCcCceEEE-ecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc---
Confidence 344556667778887 544332 3 37999999999999999999999876431 12345789999999872
Q ss_pred CCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEE
Q 024775 159 TQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSIL 237 (262)
Q Consensus 159 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~Vl 237 (262)
+||+|+++.. .|+|+||++++++.++++|+++++++++.+++.+.|||+++. .+++++|++||
T Consensus 1609 -------vGdrV~g~~~---------~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VL 1672 (2512)
T 2vz8_A 1609 -------SGRRVMGMVP---------AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVL 1672 (2512)
T ss_dssp -------TSCCEEEECS---------SCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEE
T ss_pred -------cCCEEEEeec---------CCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 7999998763 589999999999999999999999999999999999999995 58899999999
Q ss_pred EEcCchHHHHHHHHHHHHcCCccC
Q 024775 238 VLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 238 I~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
|+||+|++|++++|+||.+|++|+
T Consensus 1673 I~gaaGgVG~aAiqlAk~~Ga~Vi 1696 (2512)
T 2vz8_A 1673 IHSGSGGVGQAAIAIALSRGCRVF 1696 (2512)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred EEeCChHHHHHHHHHHHHcCCEEE
Confidence 999999999999999999999885
No 71
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=98.96 E-value=3.5e-10 Score=93.55 Aligned_cols=65 Identities=26% Similarity=0.392 Sum_probs=49.8
Q ss_pred CCeEECCCCCCHhhHhcccchHHHHHHHHH-HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 197 RLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 197 ~~~~~lP~~~~~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+.++++|+++++++++.+++++.|||+++. ..++++|++|+|+||+|++|++++|+++..|++|+
T Consensus 2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~ 67 (198)
T 1pqw_A 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIY 67 (198)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEE
T ss_pred CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEE
Confidence 467899999999999999999999999996 47899999999999999999999999999999874
No 72
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.30 E-value=1.8e-07 Score=86.16 Aligned_cols=115 Identities=16% Similarity=0.116 Sum_probs=82.4
Q ss_pred CCCCccEEEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEECCCCCCHhhHhcccchHHHHHH
Q 024775 144 TVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYE 223 (262)
Q Consensus 144 ~~~G~e~vG~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~ 223 (262)
...|++.++.|..+|.++.++.+|+.++.-.-..++......|++.+|+.+....++.+|+.++.+.++. .....++|.
T Consensus 75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~ 153 (404)
T 1gpj_A 75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSA 153 (404)
T ss_dssp EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHH
T ss_pred eecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHH
Confidence 4578999999999999999999999863100000000000136678888777777888888877666544 334557888
Q ss_pred HHHHcC----CCCCCEEEEEcCchHHHHHHHHHHHHcCC-cc
Q 024775 224 GLERTG----FSAGKSILVLNGSGGVGSLVIQVCYYYLE-FF 260 (262)
Q Consensus 224 al~~~~----~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V 260 (262)
+++... -.+|++|+|+| +|++|.++++.++..|+ +|
T Consensus 154 av~~a~~~~~~l~g~~VlIiG-aG~iG~~~a~~l~~~G~~~V 194 (404)
T 1gpj_A 154 AVELAERELGSLHDKTVLVVG-AGEMGKTVAKSLVDRGVRAV 194 (404)
T ss_dssp HHHHHHHHHSCCTTCEEEEES-CCHHHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHhccccCCEEEEEC-hHHHHHHHHHHHHHCCCCEE
Confidence 775432 35899999999 69999999999999998 55
No 73
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.85 E-value=0.051 Score=50.98 Aligned_cols=44 Identities=18% Similarity=0.198 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHcC--CCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 217 AIETAYEGLERTG--FSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 217 ~~~tA~~al~~~~--~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
...+.|+++.+.. ..+|++|+|+| .|.+|+.+++.++.+|++|+
T Consensus 256 ~~~s~~~g~~r~~~~~l~GktV~IiG-~G~IG~~~A~~lka~Ga~Vi 301 (494)
T 3ce6_A 256 TRHSLIDGINRGTDALIGGKKVLICG-YGDVGKGCAEAMKGQGARVS 301 (494)
T ss_dssp HHHHHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred hhhhhhHHHHhccCCCCCcCEEEEEc-cCHHHHHHHHHHHHCCCEEE
Confidence 3456677776543 78999999999 89999999999999999874
No 74
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=93.55 E-value=0.18 Score=41.61 Aligned_cols=38 Identities=13% Similarity=0.206 Sum_probs=30.4
Q ss_pred HHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 221 AYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 221 A~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+.+.+....+++|++||..| +| .|..++++++. +.+|+
T Consensus 80 ~~~~~~~~~~~~~~~vldiG-~G-~G~~~~~l~~~-~~~v~ 117 (248)
T 2yvl_A 80 SFYIALKLNLNKEKRVLEFG-TG-SGALLAVLSEV-AGEVW 117 (248)
T ss_dssp HHHHHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHH-SSEEE
T ss_pred HHHHHHhcCCCCCCEEEEeC-CC-ccHHHHHHHHh-CCEEE
Confidence 34556778899999999998 77 59999999988 66653
No 75
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.59 E-value=0.12 Score=46.58 Aligned_cols=29 Identities=17% Similarity=0.165 Sum_probs=26.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+|++|+|+| +|.+|+.++++|+.+|++|+
T Consensus 171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~ 199 (384)
T 1l7d_A 171 PPARVLVFG-VGVAGLQAIATAKRLGAVVM 199 (384)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 689999999 89999999999999999763
No 76
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.28 E-value=0.14 Score=45.74 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=25.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++++|+|+| +|++|++++++++.+|++|+
T Consensus 166 ~~~~VlViG-aGgvG~~aa~~a~~~Ga~V~ 194 (361)
T 1pjc_A 166 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQ 194 (361)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEE
Confidence 348999999 59999999999999999764
No 77
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.22 E-value=0.14 Score=46.61 Aligned_cols=29 Identities=14% Similarity=0.147 Sum_probs=26.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+|++|+|+| +|.+|+.++++|+.+|++|+
T Consensus 171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~ 199 (401)
T 1x13_A 171 PPAKVMVIG-AGVAGLAAIGAANSLGAIVR 199 (401)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 588999999 89999999999999999763
No 78
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.84 E-value=0.046 Score=41.94 Aligned_cols=40 Identities=15% Similarity=0.085 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 220 TAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 220 tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.++.+++.+....+++|+|+| +|.+|...++.++..|++|
T Consensus 8 v~~~a~~~~~~~~~~~v~iiG-~G~iG~~~a~~l~~~g~~v 47 (144)
T 3oj0_A 8 IPSIVYDIVRKNGGNKILLVG-NGMLASEIAPYFSYPQYKV 47 (144)
T ss_dssp HHHHHHHHHHHHCCCEEEEEC-CSHHHHHHGGGCCTTTCEE
T ss_pred HHHHHHHHHHhccCCEEEEEC-CCHHHHHHHHHHHhCCCEE
Confidence 477777665555599999999 7999999988888777653
No 79
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.38 E-value=0.19 Score=45.28 Aligned_cols=29 Identities=10% Similarity=0.100 Sum_probs=26.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+|++|+|+| +|.+|+.+++.++.+|++|+
T Consensus 167 ~g~~V~ViG-~G~iG~~~a~~a~~~Ga~V~ 195 (377)
T 2vhw_A 167 EPADVVVIG-AGTAGYNAARIANGMGATVT 195 (377)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEE
Confidence 689999999 59999999999999999774
No 80
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=89.76 E-value=0.25 Score=41.93 Aligned_cols=30 Identities=23% Similarity=0.215 Sum_probs=26.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.++++||.||+|++|+..++.+...|++|+
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~ 60 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVV 60 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEE
Confidence 578999999999999999998888898874
No 81
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.75 E-value=0.24 Score=44.43 Aligned_cols=29 Identities=24% Similarity=0.308 Sum_probs=26.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++|+|+|+ |++|+.+++.++.+|++|+
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~ 193 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIALGMGAQVT 193 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEE
Confidence 4689999995 9999999999999999874
No 82
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=89.14 E-value=0.29 Score=41.67 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|.++||.||+|++|...++.+...|++|+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~ 59 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVL 59 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE
Confidence 3578999999999999999988888899874
No 83
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.11 E-value=0.29 Score=42.05 Aligned_cols=30 Identities=23% Similarity=0.282 Sum_probs=27.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+++||.||+|++|...++.+...|++|+
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~ 75 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIA 75 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEE
Confidence 678999999999999999998888999874
No 84
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=89.01 E-value=0.3 Score=42.21 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=27.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|+++||.||+|++|+..++.+...|++|+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~ 59 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLV 59 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 4688999999999999999998888898874
No 85
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=88.73 E-value=0.33 Score=41.43 Aligned_cols=30 Identities=23% Similarity=0.183 Sum_probs=26.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+++||.||+|++|...++.+...|++|+
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~ 60 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVA 60 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 578999999999999999988888899874
No 86
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.65 E-value=0.33 Score=41.27 Aligned_cols=31 Identities=26% Similarity=0.279 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|+++||.||+|++|.+.++.+...|++|+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~ 59 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVA 59 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE
Confidence 3678999999999999999988888999874
No 87
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=88.16 E-value=0.29 Score=41.74 Aligned_cols=30 Identities=20% Similarity=0.236 Sum_probs=27.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+++||.||++++|.+.++.+...|++|+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~ 61 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVI 61 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE
Confidence 578999999999999999998888899874
No 88
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=88.13 E-value=0.63 Score=39.38 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=28.4
Q ss_pred HHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHc--CCccC
Q 024775 223 EGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYY--LEFFF 261 (262)
Q Consensus 223 ~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~--Ga~V~ 261 (262)
..+....++++++||-.| +|. |..++.+++.. +.+|+
T Consensus 103 ~i~~~~~~~~~~~VLDiG-~G~-G~~~~~la~~~~~~~~v~ 141 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVF 141 (277)
T ss_dssp HHHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEE
T ss_pred HHHHHhCCCCCCEEEEEC-CcC-CHHHHHHHHHhCCCcEEE
Confidence 344567899999999998 777 88889999885 34543
No 89
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.10 E-value=0.37 Score=41.42 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=27.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+++||.||+|++|+..++.....|++|+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~ 77 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVA 77 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEE
Confidence 578999999999999999998888999874
No 90
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=88.10 E-value=0.38 Score=40.69 Aligned_cols=30 Identities=17% Similarity=0.256 Sum_probs=26.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+.++||.||+|++|...++.+...|++|+
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~ 59 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLV 59 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEE
Confidence 578999999999999999998888898874
No 91
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=88.09 E-value=0.26 Score=42.13 Aligned_cols=31 Identities=26% Similarity=0.202 Sum_probs=25.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|+++||.||+|++|.+.++.+...|++|+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~ 61 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVV 61 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 4688999999999999999988888899874
No 92
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.89 E-value=0.37 Score=43.99 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=26.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++.+|+|+| +|.+|+.++++|+.+|++|+
T Consensus 189 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~ 217 (405)
T 4dio_A 189 PAAKIFVMG-AGVAGLQAIATARRLGAVVS 217 (405)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEE
Confidence 678999999 89999999999999999874
No 93
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.84 E-value=0.4 Score=41.15 Aligned_cols=31 Identities=26% Similarity=0.189 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..|.+++|+||+|++|.+++..+...|++|+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~ 147 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVV 147 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEE
Confidence 3688999999999999999999988998763
No 94
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=87.78 E-value=0.4 Score=41.21 Aligned_cols=30 Identities=23% Similarity=0.162 Sum_probs=26.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.++||.||+|++|...++.+...|++|+
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~ 62 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAGATIV 62 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEE
Confidence 578999999999999999988888898874
No 95
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=87.63 E-value=0.32 Score=42.00 Aligned_cols=30 Identities=23% Similarity=0.266 Sum_probs=27.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+++||.||+|++|...++.+...|++|+
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~ 69 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVA 69 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEE
Confidence 688999999999999999998888999874
No 96
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=87.59 E-value=0.38 Score=43.56 Aligned_cols=29 Identities=21% Similarity=0.040 Sum_probs=26.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++.+|+|+| .|.+|+.++++++.+|++|+
T Consensus 183 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~ 211 (381)
T 3p2y_A 183 KPASALVLG-VGVAGLQALATAKRLGAKTT 211 (381)
T ss_dssp CCCEEEEES-CSHHHHHHHHHHHHHTCEEE
T ss_pred CCCEEEEEC-chHHHHHHHHHHHHCCCEEE
Confidence 678999999 89999999999999999874
No 97
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=87.32 E-value=0.36 Score=42.02 Aligned_cols=31 Identities=13% Similarity=-0.015 Sum_probs=27.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|+++||.||+|++|+..++.....|++|+
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv 74 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIV 74 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEE
Confidence 4688999999999999999998888999874
No 98
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=86.95 E-value=0.81 Score=39.50 Aligned_cols=48 Identities=13% Similarity=0.052 Sum_probs=37.9
Q ss_pred cccchHHHHHHHHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 213 GLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 213 ~l~~~~~tA~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..|+........+++.+ -.|.+++|.|.++.+|..+++++...|++|+
T Consensus 131 ~~PcTp~gv~~lL~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVt 178 (276)
T 3ngx_A 131 LVPATPRAVIDIMDYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNYTVS 178 (276)
T ss_dssp SCCHHHHHHHHHHHHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred CCCCcHHHHHHHHHHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCCeEE
Confidence 34555555566666666 7899999999777799999999999999875
No 99
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=86.90 E-value=0.91 Score=39.36 Aligned_cols=49 Identities=18% Similarity=0.072 Sum_probs=37.7
Q ss_pred cccchHHHHHHHHHHcCC-CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 213 ~l~~~~~tA~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..++........+++..+ -.|.+++|.|.++.+|..+++++...|++|+
T Consensus 140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt 189 (285)
T 3l07_A 140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVT 189 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEE
Confidence 345555555666666655 4899999999666789999999999999875
No 100
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=86.68 E-value=0.44 Score=42.28 Aligned_cols=30 Identities=17% Similarity=0.201 Sum_probs=27.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+++||.||++++|++.++.+...|++|+
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vv 73 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIV 73 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEE
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEE
Confidence 689999999999999999988888898874
No 101
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=86.37 E-value=0.98 Score=39.19 Aligned_cols=49 Identities=18% Similarity=-0.019 Sum_probs=37.8
Q ss_pred cccchHHHHHHHHHHcCC-CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 213 ~l~~~~~tA~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..++........|++.++ -.|.+++|.|.++.+|..+++++...||+|+
T Consensus 140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVt 189 (286)
T 4a5o_A 140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVT 189 (286)
T ss_dssp SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEE
Confidence 345555555666666655 3899999999777799999999999999875
No 102
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=86.32 E-value=1.1 Score=40.05 Aligned_cols=35 Identities=20% Similarity=0.274 Sum_probs=30.0
Q ss_pred HHcCC--CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 226 ERTGF--SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 226 ~~~~~--~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+..+. -.|++|.|.| .|.+|+.+++.++.+|++|.
T Consensus 166 ~~~G~~~L~GktV~I~G-~GnVG~~~A~~l~~~GakVv 202 (355)
T 1c1d_A 166 AHRGLGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLL 202 (355)
T ss_dssp HHTTCCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred HhcCCCCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEE
Confidence 33444 5899999998 99999999999999999874
No 103
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=86.25 E-value=0.4 Score=40.85 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=26.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+.++||.||+|++|...++.+...|++|+
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~ 72 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVI 72 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEE
Confidence 478999999999999999888888888764
No 104
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.09 E-value=0.92 Score=41.69 Aligned_cols=41 Identities=24% Similarity=0.325 Sum_probs=33.3
Q ss_pred HHHHHHHHc--CCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 220 TAYEGLERT--GFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 220 tA~~al~~~--~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..+.++.++ ..-.|++|+|.| .|.+|+.+++.++.+|++|.
T Consensus 205 s~~~gi~rat~~~L~GktV~ViG-~G~IGk~vA~~Lra~Ga~Vi 247 (435)
T 3gvp_A 205 SILDGLKRTTDMMFGGKQVVVCG-YGEVGKGCCAALKAMGSIVY 247 (435)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhhCceecCCEEEEEe-eCHHHHHHHHHHHHCCCEEE
Confidence 345555543 356899999999 99999999999999999874
No 105
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=85.92 E-value=1.1 Score=38.81 Aligned_cols=48 Identities=17% Similarity=0.095 Sum_probs=36.8
Q ss_pred ccchHHHHHHHHHHcCC-CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 214 LPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 214 l~~~~~tA~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.++........+++..+ -.|.+++|.|.++.+|..+++++...||+|+
T Consensus 140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVt 188 (285)
T 3p2o_A 140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVS 188 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEE
Confidence 45554445555566554 4899999999777799999999999999875
No 106
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=85.49 E-value=0.49 Score=41.45 Aligned_cols=30 Identities=10% Similarity=-0.119 Sum_probs=27.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.++||.||+|++|+..++.+...|++|+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv 74 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVC 74 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE
Confidence 578999999999999999999888999874
No 107
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=85.42 E-value=1.1 Score=39.09 Aligned_cols=48 Identities=27% Similarity=0.214 Sum_probs=37.0
Q ss_pred ccchHHHHHHHHHHcCC-CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 214 LPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 214 l~~~~~tA~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.++........|++..+ -.|.+++|.|.++.+|..+++++...|++|+
T Consensus 145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt 193 (300)
T 4a26_A 145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVT 193 (300)
T ss_dssp CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEE
Confidence 45555555555666554 4899999999667799999999999999875
No 108
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=85.09 E-value=0.44 Score=40.26 Aligned_cols=30 Identities=27% Similarity=0.176 Sum_probs=26.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+.++||.||+|++|...+..+...|++|+
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~ 62 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVA 62 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEE
Confidence 478999999999999998888888898774
No 109
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=85.08 E-value=1.4 Score=31.72 Aligned_cols=24 Identities=33% Similarity=0.397 Sum_probs=19.4
Q ss_pred EEEEEEEeCCCCC---------CCCCCCEEEEe
Q 024775 150 VAGVVVKVGTQVK---------EFKEGDEVYGD 173 (262)
Q Consensus 150 ~vG~Vv~vG~~v~---------~~~~Gd~V~~~ 173 (262)
..|+|++||++.. .+++||+|+..
T Consensus 36 ~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ 68 (95)
T 3nx6_A 36 TKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYG 68 (95)
T ss_dssp EEEEEEEECSCEECTTSCEECCSCCTTCEEEEC
T ss_pred cccEEEEECCCeECCCCCEEccccCCCCEEEEC
Confidence 4799999998743 48999999763
No 110
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.88 E-value=0.67 Score=39.94 Aligned_cols=30 Identities=23% Similarity=0.119 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|++|+|+| .|.+|+.+++.++.+|++|+
T Consensus 153 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~ 182 (293)
T 3d4o_A 153 IHGANVAVLG-LGRVGMSVARKFAALGAKVK 182 (293)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEE
Confidence 4789999999 99999999999999999764
No 111
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=83.41 E-value=0.81 Score=42.31 Aligned_cols=40 Identities=28% Similarity=0.156 Sum_probs=32.8
Q ss_pred HHHHHHH-c-CCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 221 AYEGLER-T-GFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 221 A~~al~~-~-~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+.++.+ . ..-.|++|+|.| .|.+|+.+++.++.+|++|+
T Consensus 233 lvdgI~Ratg~~L~GKTVgVIG-~G~IGr~vA~~lrafGa~Vi 274 (464)
T 3n58_A 233 LVDGIRRGTDVMMAGKVAVVCG-YGDVGKGSAQSLAGAGARVK 274 (464)
T ss_dssp HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhcCCcccCCEEEEEC-cCHHHHHHHHHHHHCCCEEE
Confidence 4455544 2 356899999999 99999999999999999874
No 112
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=82.99 E-value=0.85 Score=42.58 Aligned_cols=30 Identities=23% Similarity=0.098 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|++++|.| .|++|+.+++.++..|++|+
T Consensus 263 L~GKtVvVtG-aGgIG~aiA~~Laa~GA~Vi 292 (488)
T 3ond_A 263 IAGKVAVVAG-YGDVGKGCAAALKQAGARVI 292 (488)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred ccCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 5899999999 77999999999999999874
No 113
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=82.24 E-value=1.8 Score=37.78 Aligned_cols=49 Identities=20% Similarity=0.218 Sum_probs=36.7
Q ss_pred cccchHHHHHHHHHHcCC-CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 213 ~l~~~~~tA~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+||........|++..+ -.|.+++|.|++..+|.-+++++...|++|+
T Consensus 144 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVt 193 (301)
T 1a4i_A 144 FIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVT 193 (301)
T ss_dssp CCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred ccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEE
Confidence 345555445555555554 4899999999666789999999999999875
No 114
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=82.22 E-value=0.98 Score=38.98 Aligned_cols=30 Identities=17% Similarity=0.106 Sum_probs=27.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|++|+|+| .|.+|+.+++.++.+|++|+
T Consensus 155 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~ 184 (300)
T 2rir_A 155 IHGSQVAVLG-LGRTGMTIARTFAALGANVK 184 (300)
T ss_dssp STTSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEEc-ccHHHHHHHHHHHHCCCEEE
Confidence 4789999999 89999999999999999764
No 115
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=82.05 E-value=1 Score=41.33 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=27.3
Q ss_pred cCC-CCCCEEEEEcCchHHHHHHHHHHHH-cCCccC
Q 024775 228 TGF-SAGKSILVLNGSGGVGSLVIQVCYY-YLEFFF 261 (262)
Q Consensus 228 ~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~-~Ga~V~ 261 (262)
..+ +.|+++||.||++|+|++.+..+.. .|++|.
T Consensus 55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv 90 (422)
T 3s8m_A 55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTL 90 (422)
T ss_dssp CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEE
T ss_pred cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEE
Confidence 455 4688999999999999987766666 899874
No 116
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=82.02 E-value=1.8 Score=37.52 Aligned_cols=49 Identities=18% Similarity=0.000 Sum_probs=37.1
Q ss_pred cccchHHHHHHHHHHcCC-CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 213 ~l~~~~~tA~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+|+........+++..+ -.|.+++|.|++..+|.-+++++...|++|+
T Consensus 138 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVt 187 (288)
T 1b0a_A 138 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTT 187 (288)
T ss_dssp SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEE
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEE
Confidence 345555555555566554 4889999999666789999999999999875
No 117
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=81.27 E-value=0.91 Score=38.89 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=22.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
.|+++||.||++++|+..++.....|+
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~ 58 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASN 58 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHT
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCC
Confidence 578999999999999998877766666
No 118
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=81.21 E-value=1.1 Score=38.51 Aligned_cols=33 Identities=15% Similarity=0.068 Sum_probs=27.4
Q ss_pred CCCCCCEEEEEcCchH--HHHHHHHHHHHcCCccC
Q 024775 229 GFSAGKSILVLNGSGG--VGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~--vG~~aiqlAk~~Ga~V~ 261 (262)
..-.|+++||.||+|+ +|++.++.+...|++|+
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~ 61 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELA 61 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEE
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEE
Confidence 3356899999999965 99999988888898874
No 119
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=80.75 E-value=2 Score=36.53 Aligned_cols=29 Identities=21% Similarity=0.183 Sum_probs=25.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+++|+| +|++|.++++.+...|++|+
T Consensus 118 ~~k~vlViG-aGg~g~a~a~~L~~~G~~V~ 146 (271)
T 1nyt_A 118 PGLRILLIG-AGGASRGVLLPLLSLDCAVT 146 (271)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCCEEE
Confidence 688999999 58999999999999998763
No 120
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=80.27 E-value=1.4 Score=40.89 Aligned_cols=31 Identities=23% Similarity=0.302 Sum_probs=27.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
.++++.++||.||+|++|...++.+...|++
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~ 252 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAP 252 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCS
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHcCCC
Confidence 4678999999999999999988888778885
No 121
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=79.85 E-value=1.4 Score=40.18 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=26.7
Q ss_pred CC-CCCCEEEEEcCchHHHHHHHHHHHH-cCCccC
Q 024775 229 GF-SAGKSILVLNGSGGVGSLVIQVCYY-YLEFFF 261 (262)
Q Consensus 229 ~~-~~g~~VlI~Ga~G~vG~~aiqlAk~-~Ga~V~ 261 (262)
.+ ..|+++||.||++++|++.++.+.. .|++|.
T Consensus 42 ~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv 76 (405)
T 3zu3_A 42 PIANGPKRVLVIGASTGYGLAARITAAFGCGADTL 76 (405)
T ss_dssp CCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEE
T ss_pred CcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEE
Confidence 44 5678899999999999987776666 899874
No 122
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=79.81 E-value=1.1 Score=39.08 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=23.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcC-CccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYL-EFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~G-a~V~ 261 (262)
.+.+|||.||+|.+|..+++.+...| .+|+
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~ 75 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDIL 75 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEE
Confidence 45689999999999999998888888 6653
No 123
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=79.72 E-value=1.2 Score=41.90 Aligned_cols=31 Identities=10% Similarity=-0.100 Sum_probs=27.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
.++++.++||.||+|++|+..++.+...|++
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~ 277 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAG 277 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCC
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCC
Confidence 3678899999999999999988887778886
No 124
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=79.68 E-value=1.1 Score=41.22 Aligned_cols=30 Identities=20% Similarity=0.247 Sum_probs=26.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.++||.||+|++|+..++.....|++|+
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vv 241 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGATVV 241 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEE
Confidence 578999999999999998888888899874
No 125
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=79.36 E-value=1.4 Score=38.83 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=25.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcC-CccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYL-EFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~G-a~V~ 261 (262)
.+.+|||.||+|.+|..+++.+...| .+|+
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~ 61 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVH 61 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEE
Confidence 35689999999999999999888888 7664
No 126
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=78.41 E-value=2.6 Score=36.91 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=28.7
Q ss_pred HHHHHcCCC-CCCEEEEEcCchHHHHHHHHHHHHcCC-cc
Q 024775 223 EGLERTGFS-AGKSILVLNGSGGVGSLVIQVCYYYLE-FF 260 (262)
Q Consensus 223 ~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V 260 (262)
.+|+...+. .|.+++|+| +|++|.+++..+...|+ +|
T Consensus 143 ~~L~~~~~~l~gk~~lVlG-aGG~g~aia~~L~~~Ga~~V 181 (315)
T 3tnl_A 143 RALKEAGHDIIGKKMTICG-AGGAATAICIQAALDGVKEI 181 (315)
T ss_dssp HHHHHTTCCCTTSEEEEEC-CSHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHcCCCccCCEEEEEC-CChHHHHHHHHHHHCCCCEE
Confidence 344544443 688999999 69999999999999998 55
No 127
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=77.59 E-value=2.3 Score=30.83 Aligned_cols=47 Identities=36% Similarity=0.311 Sum_probs=28.1
Q ss_pred EEEEEEeCCCCC---------CCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEE
Q 024775 151 AGVVVKVGTQVK---------EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAP 201 (262)
Q Consensus 151 vG~Vv~vG~~v~---------~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~ 201 (262)
.|+|++||++.. .+++||+|+..-. .+.+-.-.=.+|+++.++.++-
T Consensus 42 ~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky----~Gtevk~dgeeyli~re~DIla 97 (100)
T 1we3_O 42 KGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKY----GGTEIEIDGEEYVILSERDLLA 97 (100)
T ss_dssp EEEESCCCCCEECTTSCEECCSCCTTCEEEECTT----CSEEEECSSCEEEEECTTTEEE
T ss_pred CCEEEEECCCcCCCCCCEEeeecCCCCEEEECCC----CCeEEEECCEEEEEEEhHHEEE
Confidence 699999998742 4899999976321 0000000014677777766553
No 128
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=77.57 E-value=1.8 Score=40.43 Aligned_cols=30 Identities=13% Similarity=0.195 Sum_probs=26.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
++++.++||.||+|++|...++.+...|++
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~ 285 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAE 285 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCc
Confidence 578899999999999999988888888884
No 129
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=77.49 E-value=0.96 Score=39.49 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=29.4
Q ss_pred HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 227 RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++++|++||.+| +|..|+.++.+|+..|++|+
T Consensus 117 la~l~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~ 150 (298)
T 3fpf_A 117 LGRFRRGERAVFIG-GGPLPLTGILLSHVYGMRVN 150 (298)
T ss_dssp HTTCCTTCEEEEEC-CCSSCHHHHHHHHTTCCEEE
T ss_pred HcCCCCcCEEEEEC-CCccHHHHHHHHHccCCEEE
Confidence 36899999999999 88878888888988898875
No 130
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=77.34 E-value=3.9 Score=30.24 Aligned_cols=24 Identities=29% Similarity=0.137 Sum_probs=19.9
Q ss_pred EEEEEEEeCCCCC--CCCCCCEEEEe
Q 024775 150 VAGVVVKVGTQVK--EFKEGDEVYGD 173 (262)
Q Consensus 150 ~vG~Vv~vG~~v~--~~~~Gd~V~~~ 173 (262)
..|+|++||.++. .+++||+|+.-
T Consensus 47 ~~g~VvAVG~g~~~~~vKvGD~Vl~~ 72 (111)
T 1g31_A 47 ELCVVHSVGPDVPEGFCEVGDLTSLP 72 (111)
T ss_dssp EEEEEEEECTTSCTTSCCTTCEEEEE
T ss_pred ceEEEEEECCCCccccccCCCEEEEC
Confidence 4699999999875 48999999863
No 131
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=77.14 E-value=1.5 Score=39.33 Aligned_cols=29 Identities=24% Similarity=0.416 Sum_probs=24.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcC-Ccc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYL-EFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~G-a~V 260 (262)
.+.+|||+||+|.+|...++.+...| .+|
T Consensus 34 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~V 63 (399)
T 3nzo_A 34 SQSRFLVLGGAGSIGQAVTKEIFKRNPQKL 63 (399)
T ss_dssp HTCEEEEETTTSHHHHHHHHHHHTTCCSEE
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCCEE
Confidence 46799999999999999998888888 454
No 132
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=76.67 E-value=2 Score=38.97 Aligned_cols=31 Identities=32% Similarity=0.320 Sum_probs=25.3
Q ss_pred CCCCCEEEEEcCchHHHHH-HHHHHHHcCCcc
Q 024775 230 FSAGKSILVLNGSGGVGSL-VIQVCYYYLEFF 260 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~-aiqlAk~~Ga~V 260 (262)
...++++||.|+++++|++ ++.+|...|+.+
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~v 78 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAAT 78 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEE
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCE
Confidence 4567899999999999997 567776778765
No 133
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=76.37 E-value=4.7 Score=29.13 Aligned_cols=48 Identities=27% Similarity=0.247 Sum_probs=28.3
Q ss_pred EEEEEEEeCCCCC----------CCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEE
Q 024775 150 VAGVVVKVGTQVK----------EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAP 201 (262)
Q Consensus 150 ~vG~Vv~vG~~v~----------~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~ 201 (262)
..|+|++||++.. .+++||+|+.--. .+.+-.-.=.+|+++.++.++-
T Consensus 38 ~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky----~Gtevk~dgeey~i~re~DIla 95 (99)
T 1p3h_A 38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKY----GGTEIKYNGEEYLILSARDVLA 95 (99)
T ss_dssp EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECT----TCEEEEETTEEEEEEEGGGEEE
T ss_pred ceEEEEEECCCcCcCCCCEEEccccCCCCEEEECCc----CCeEEEECCEEEEEEEhHhEEE
Confidence 5799999998641 3899999976321 0000000114677777665543
No 134
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=75.86 E-value=2.9 Score=36.12 Aligned_cols=49 Identities=18% Similarity=0.084 Sum_probs=36.1
Q ss_pred cccchHHHHHHHHHHcCC-CCCCEEEEEcCchHHHHHHHHHHHHc--CCccC
Q 024775 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQVCYYY--LEFFF 261 (262)
Q Consensus 213 ~l~~~~~tA~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~--Ga~V~ 261 (262)
.+|+....+...+++.++ -.|.+++|.|++..+|..+++++... |++|+
T Consensus 137 ~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVt 188 (281)
T 2c2x_A 137 PLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVT 188 (281)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEE
T ss_pred CCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEE
Confidence 345555555555566553 48999999996557899999999999 88875
No 135
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=75.55 E-value=2 Score=39.49 Aligned_cols=32 Identities=9% Similarity=0.089 Sum_probs=26.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHc---CCccC
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCYYY---LEFFF 261 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~---Ga~V~ 261 (262)
...+.+|||+||+|.+|..+++.+... |.+|+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~ 104 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLI 104 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEE
Confidence 456889999999999999988777666 77664
No 136
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=75.48 E-value=2.1 Score=39.77 Aligned_cols=29 Identities=10% Similarity=-0.038 Sum_probs=26.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+.+|||+||+|.+|..+++.+...|.+|+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~ 175 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVI 175 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEE
Confidence 67999999999999999999988888764
No 137
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=74.61 E-value=2.2 Score=39.14 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=31.8
Q ss_pred HHHHHHH--cCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 221 AYEGLER--TGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 221 A~~al~~--~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+.++.+ ...-.|.+|+|.| .|.+|..+++.++.+|++|+
T Consensus 197 lldgi~ratg~~L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Vi 238 (436)
T 3h9u_A 197 LVDGIKRATDVMIAGKTACVCG-YGDVGKGCAAALRGFGARVV 238 (436)
T ss_dssp HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhcCCcccCCEEEEEe-eCHHHHHHHHHHHHCCCEEE
Confidence 3444433 2345799999999 99999999999999999874
No 138
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=74.25 E-value=1.9 Score=41.21 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=27.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+++||.||++++|++.++.+...|++|+
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv 350 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVV 350 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEE
Confidence 478999999999999999999989999874
No 139
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=74.19 E-value=1.2 Score=40.09 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..+.+|||+||+|.+|..+++.+...|.+|+
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~ 97 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIY 97 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEE
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEE
Confidence 4567999999999999998887777777664
No 140
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=74.07 E-value=4.1 Score=35.80 Aligned_cols=49 Identities=24% Similarity=0.125 Sum_probs=36.0
Q ss_pred cccchHHHHHHHHHH---------cCC-CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 213 GLPLAIETAYEGLER---------TGF-SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 213 ~l~~~~~tA~~al~~---------~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+|+....+...+++ .++ -.|.+++|.|+...+|..+++++...|++|+
T Consensus 147 ~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVt 205 (320)
T 1edz_A 147 ILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVY 205 (320)
T ss_dssp CCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEE
T ss_pred cCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEE
Confidence 445555555666665 332 3789999999544679999999999999875
No 141
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=73.58 E-value=2.2 Score=38.94 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=25.3
Q ss_pred cCCCCCCEEEEEcCchHHHHH--HHHHHHHcCCcc
Q 024775 228 TGFSAGKSILVLNGSGGVGSL--VIQVCYYYLEFF 260 (262)
Q Consensus 228 ~~~~~g~~VlI~Ga~G~vG~~--aiqlAk~~Ga~V 260 (262)
..+..|+++||.||++++|++ .+......|++|
T Consensus 55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~V 89 (418)
T 4eue_A 55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHT 89 (418)
T ss_dssp CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEE
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEE
Confidence 346789999999999999998 444444448877
No 142
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=73.34 E-value=4.4 Score=35.40 Aligned_cols=34 Identities=21% Similarity=0.409 Sum_probs=26.9
Q ss_pred HHHHcCCC-CCCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 224 GLERTGFS-AGKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 224 al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
+|+...+. .|.+++|+| +|++|.+++..+...|+
T Consensus 138 ~L~~~~~~l~gk~~lVlG-AGGaaraia~~L~~~G~ 172 (312)
T 3t4e_A 138 AIKESGFDMRGKTMVLLG-AGGAATAIGAQAAIEGI 172 (312)
T ss_dssp HHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred HHHhcCCCcCCCEEEEEC-cCHHHHHHHHHHHHcCC
Confidence 34444443 688999999 69999999998888998
No 143
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=72.97 E-value=6.1 Score=28.43 Aligned_cols=49 Identities=22% Similarity=0.124 Sum_probs=28.3
Q ss_pred EEEEEEEeCCCC---------CCCCCCCEEEEecCccccCCCCCCCceeeEEEecCCCeEE
Q 024775 150 VAGVVVKVGTQV---------KEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAP 201 (262)
Q Consensus 150 ~vG~Vv~vG~~v---------~~~~~Gd~V~~~~~~~~~~~~~~~G~~ae~~~v~~~~~~~ 201 (262)
..|+|++||++. ..+++||+|+.--.+.... ....| .+|+++.++.++.
T Consensus 36 ~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gte-vk~dg--eey~i~re~DIla 93 (97)
T 1pcq_O 36 TRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKS-EKIDN--EEVLIMSESDILA 93 (97)
T ss_dssp CEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEE-EEETT--EEEEEEEGGGEEE
T ss_pred cccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeE-EEECC--EEEEEEEhHHEEE
Confidence 469999999863 1389999997632100000 00011 5677777666543
No 144
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=72.69 E-value=2.4 Score=33.21 Aligned_cols=28 Identities=14% Similarity=0.128 Sum_probs=24.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHc-CCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYY-LEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~-Ga~V 260 (262)
.+++|+|+| .|.+|..+++.++.. |.+|
T Consensus 38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V 66 (183)
T 3c85_A 38 GHAQVLILG-MGRIGTGAYDELRARYGKIS 66 (183)
T ss_dssp TTCSEEEEC-CSHHHHHHHHHHHHHHCSCE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhccCCeE
Confidence 467899998 899999999999988 8766
No 145
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=72.22 E-value=3.2 Score=38.66 Aligned_cols=30 Identities=27% Similarity=0.251 Sum_probs=25.2
Q ss_pred CCCC--CEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 230 FSAG--KSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 230 ~~~g--~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
++++ .++||.||+|++|+..++.....|++
T Consensus 234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~ 265 (496)
T 3mje_A 234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAA 265 (496)
T ss_dssp CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCS
T ss_pred CCCCCCCEEEEECCCCchHHHHHHHHHHCCCc
Confidence 3445 89999999999999988888788883
No 146
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=71.86 E-value=2.9 Score=37.42 Aligned_cols=31 Identities=13% Similarity=-0.008 Sum_probs=27.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
--.|.+|+|.| .|.+|..+++.+..+|++|.
T Consensus 170 ~L~GktV~V~G-~G~VG~~~A~~L~~~GakVv 200 (364)
T 1leh_A 170 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLV 200 (364)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCcCEEEEEC-chHHHHHHHHHHHHCCCEEE
Confidence 35889999999 89999999999999999873
No 147
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=70.88 E-value=3.8 Score=34.71 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=27.7
Q ss_pred HHHHcCC-CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 224 GLERTGF-SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 224 al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+|+..++ -.+.+++|+| +|++|.+++..+...|++|+
T Consensus 109 ~L~~~~~~~~~~~vlvlG-aGg~g~a~a~~L~~~G~~v~ 146 (272)
T 1p77_A 109 DLQRLNWLRPNQHVLILG-AGGATKGVLLPLLQAQQNIV 146 (272)
T ss_dssp HHHHTTCCCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEE
T ss_pred HHHHhCCCcCCCEEEEEC-CcHHHHHHHHHHHHCCCEEE
Confidence 3444333 3678999999 69999998888888887663
No 148
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=70.09 E-value=7.1 Score=35.58 Aligned_cols=29 Identities=17% Similarity=0.245 Sum_probs=27.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHH-cCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYY-YLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~-~Ga~V~ 261 (262)
.|.+|.|.| .|.+|..++++++. +|++|.
T Consensus 211 ~gktvgI~G-~G~VG~~vA~~l~~~~G~kVv 240 (419)
T 1gtm_A 211 KGKTIAIQG-YGNAGYYLAKIMSEDFGMKVV 240 (419)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEc-CCHHHHHHHHHHHHhcCCEEE
Confidence 689999999 99999999999999 999874
No 149
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=69.73 E-value=4.6 Score=34.73 Aligned_cols=37 Identities=22% Similarity=0.203 Sum_probs=28.5
Q ss_pred HHHHHcCCC-CCCEEEEEcCchHHHHHHHHHHHHcCC-cc
Q 024775 223 EGLERTGFS-AGKSILVLNGSGGVGSLVIQVCYYYLE-FF 260 (262)
Q Consensus 223 ~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V 260 (262)
.+|+..++. .|.+++|+| +|++|.+++..++..|+ +|
T Consensus 111 ~~L~~~~~~~~~k~vlvlG-aGGaaraia~~L~~~G~~~v 149 (282)
T 3fbt_A 111 KMLSKFRVEIKNNICVVLG-SGGAARAVLQYLKDNFAKDI 149 (282)
T ss_dssp HHHHHTTCCCTTSEEEEEC-SSTTHHHHHHHHHHTTCSEE
T ss_pred HHHHHcCCCccCCEEEEEC-CcHHHHHHHHHHHHcCCCEE
Confidence 344544443 688999999 79999999999888998 44
No 150
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=69.68 E-value=5.4 Score=34.19 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=27.5
Q ss_pred HHHHcCCC-CCCEEEEEcCchHHHHHHHHHHHHcCC-cc
Q 024775 224 GLERTGFS-AGKSILVLNGSGGVGSLVIQVCYYYLE-FF 260 (262)
Q Consensus 224 al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V 260 (262)
+|+...+. .|.+++|+| +|++|.+++..+...|+ +|
T Consensus 116 ~L~~~~~~l~~k~vlvlG-aGg~g~aia~~L~~~G~~~v 153 (281)
T 3o8q_A 116 DLLAQQVLLKGATILLIG-AGGAARGVLKPLLDQQPASI 153 (281)
T ss_dssp HHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHTTCCSEE
T ss_pred HHHHhCCCccCCEEEEEC-chHHHHHHHHHHHhcCCCeE
Confidence 34444433 688999999 69999999888888896 54
No 151
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=69.42 E-value=3.6 Score=35.72 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=26.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 141 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~ 169 (307)
T 1wwk_A 141 EGKTIGIIG-FGRIGYQVAKIANALGMNIL 169 (307)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCceEEEEc-cCHHHHHHHHHHHHCCCEEE
Confidence 578999998 99999999999999998774
No 152
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=69.22 E-value=3 Score=36.61 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=26.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|..+++.++.+|++|+
T Consensus 145 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~ 173 (331)
T 1xdw_A 145 RNCTVGVVG-LGRIGRVAAQIFHGMGATVI 173 (331)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEE
Confidence 467899999 99999999999999999874
No 153
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=69.22 E-value=3 Score=36.66 Aligned_cols=29 Identities=14% Similarity=0.291 Sum_probs=26.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 144 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~ 172 (333)
T 1dxy_A 144 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVI 172 (333)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEE
Confidence 578999999 99999999999999999874
No 154
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=69.08 E-value=3.7 Score=35.75 Aligned_cols=29 Identities=24% Similarity=0.228 Sum_probs=26.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 141 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~ 169 (313)
T 2ekl_A 141 AGKTIGIVG-FGRIGTKVGIIANAMGMKVL 169 (313)
T ss_dssp TTCEEEEES-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHHCCCEEE
Confidence 678999999 99999999999999999874
No 155
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=69.08 E-value=4.4 Score=34.55 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=26.5
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
|+...+..+.+++|+| +|+.|.+++..++..|+
T Consensus 111 l~~~~~~~~~~vlvlG-aGgaarav~~~L~~~G~ 143 (271)
T 1npy_A 111 IEKYHLNKNAKVIVHG-SGGMAKAVVAAFKNSGF 143 (271)
T ss_dssp HHHTTCCTTSCEEEEC-SSTTHHHHHHHHHHTTC
T ss_pred HHHhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCC
Confidence 3444455678999999 89999999888888887
No 156
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=68.47 E-value=4 Score=36.94 Aligned_cols=27 Identities=19% Similarity=0.172 Sum_probs=23.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
+.-+|+|+|+.|.+|+.|+++|+.+|+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa 239 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGI 239 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCC
Confidence 345789999779999999999999998
No 157
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=68.28 E-value=4.2 Score=34.89 Aligned_cols=36 Identities=22% Similarity=0.311 Sum_probs=27.7
Q ss_pred HHHHcCC-CCCCEEEEEcCchHHHHHHHHHHHHcCC-cc
Q 024775 224 GLERTGF-SAGKSILVLNGSGGVGSLVIQVCYYYLE-FF 260 (262)
Q Consensus 224 al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V 260 (262)
+|+.... -.|.+++|+| +|++|.+++..++..|+ +|
T Consensus 107 ~L~~~~~~l~~k~vlvlG-aGg~g~aia~~L~~~G~~~v 144 (277)
T 3don_A 107 GLKQIYEGIEDAYILILG-AGGASKGIANELYKIVRPTL 144 (277)
T ss_dssp HHHHHSTTGGGCCEEEEC-CSHHHHHHHHHHHTTCCSCC
T ss_pred HHHHhCCCcCCCEEEEEC-CcHHHHHHHHHHHHCCCCEE
Confidence 3444433 3678999999 79999999999999998 54
No 158
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=67.44 E-value=4.4 Score=36.66 Aligned_cols=32 Identities=9% Similarity=0.007 Sum_probs=28.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+.+|++|+|+| .|.+|+..++.|+.+|.+|.
T Consensus 31 ~~~~~~~IlIlG-~G~lg~~~~~aa~~lG~~v~ 62 (419)
T 4e4t_A 31 PILPGAWLGMVG-GGQLGRMFCFAAQSMGYRVA 62 (419)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 477999999999 89999999999999998763
No 159
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=67.25 E-value=4.2 Score=35.68 Aligned_cols=29 Identities=14% Similarity=0.280 Sum_probs=26.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 136 ~gktvGIiG-lG~IG~~vA~~l~~~G~~V~ 164 (324)
T 3evt_A 136 TGQQLLIYG-TGQIGQSLAAKASALGMHVI 164 (324)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCeEEEEC-cCHHHHHHHHHHHhCCCEEE
Confidence 578999999 99999999999999999874
No 160
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=67.23 E-value=4.2 Score=36.15 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=26.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~ 187 (352)
T 3gg9_A 159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVL 187 (352)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEe-ECHHHHHHHHHHHhCCCEEE
Confidence 478999999 99999999999999999874
No 161
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=67.12 E-value=4.4 Score=34.82 Aligned_cols=28 Identities=21% Similarity=0.169 Sum_probs=24.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
-.|.+++|+| +|++|.+++..+...|++
T Consensus 125 l~~k~vlVlG-aGG~g~aia~~L~~~G~~ 152 (283)
T 3jyo_A 125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQ 152 (283)
T ss_dssp CCCSEEEEEC-CSHHHHHHHHHHHHTTCS
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHCCCC
Confidence 4688999999 699999999888888983
No 162
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=66.61 E-value=4 Score=35.20 Aligned_cols=29 Identities=24% Similarity=0.218 Sum_probs=24.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCC-cc
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLE-FF 260 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V 260 (262)
-.+.+++|+| +|++|.+++..+...|+ +|
T Consensus 139 l~~~~vlVlG-aGg~g~aia~~L~~~G~~~V 168 (297)
T 2egg_A 139 LDGKRILVIG-AGGGARGIYFSLLSTAAERI 168 (297)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCSEE
T ss_pred CCCCEEEEEC-cHHHHHHHHHHHHHCCCCEE
Confidence 3688999999 79999999999988997 54
No 163
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=66.42 E-value=3.8 Score=36.04 Aligned_cols=29 Identities=14% Similarity=0.254 Sum_probs=26.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 145 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~ 173 (333)
T 1j4a_A 145 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVI 173 (333)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEE
Confidence 478999998 99999999999999999874
No 164
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=66.33 E-value=4.5 Score=34.58 Aligned_cols=27 Identities=15% Similarity=0.020 Sum_probs=24.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
+.+++|+| +|++|.+++..++..|.+|
T Consensus 118 ~k~vlvlG-aGGaaraia~~L~~~G~~v 144 (269)
T 3phh_A 118 YQNALILG-AGGSAKALACELKKQGLQV 144 (269)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEE
Confidence 89999999 7999999999888888755
No 165
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=66.22 E-value=4 Score=35.97 Aligned_cols=29 Identities=21% Similarity=0.202 Sum_probs=26.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 164 ~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~ 192 (335)
T 2g76_A 164 NGKTLGILG-LGRIGREVATRMQSFGMKTI 192 (335)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTTTCEEE
T ss_pred CcCEEEEEe-ECHHHHHHHHHHHHCCCEEE
Confidence 678999999 99999999999999999874
No 166
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=65.78 E-value=4.5 Score=34.91 Aligned_cols=29 Identities=24% Similarity=0.364 Sum_probs=26.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 121 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~ 149 (290)
T 3gvx_A 121 YGKALGILG-YGGIGRRVAHLAKAFGMRVI 149 (290)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHHTCEEE
T ss_pred ecchheeec-cCchhHHHHHHHHhhCcEEE
Confidence 578999999 99999999999999999874
No 167
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=65.41 E-value=4.8 Score=34.98 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=26.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 143 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~ 171 (311)
T 2cuk_A 143 QGLTLGLVG-MGRIGQAVAKRALAFGMRVV 171 (311)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEE-ECHHHHHHHHHHHHCCCEEE
Confidence 577899999 99999999999999998764
No 168
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=65.17 E-value=4.4 Score=37.68 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.-.|.+|.|.| .|.+|..+++.++.+|++|+
T Consensus 254 ~l~GktVgIIG-~G~IG~~vA~~l~~~G~~Vi 284 (479)
T 1v8b_A 254 LISGKIVVICG-YGDVGKGCASSMKGLGARVY 284 (479)
T ss_dssp CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEE
T ss_pred ccCCCEEEEEe-eCHHHHHHHHHHHhCcCEEE
Confidence 45799999999 99999999999999999874
No 169
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=64.70 E-value=4.5 Score=35.30 Aligned_cols=29 Identities=10% Similarity=0.071 Sum_probs=26.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 145 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~ 173 (320)
T 1gdh_A 145 DNKTLGIYG-FGSIGQALAKRAQGFDMDID 173 (320)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTTTCEEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEE
Confidence 578999999 99999999999999998764
No 170
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=64.01 E-value=11 Score=32.13 Aligned_cols=36 Identities=33% Similarity=0.408 Sum_probs=27.9
Q ss_pred HHHHHcCCC-CCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 223 EGLERTGFS-AGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 223 ~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
.+|++.++. .++++||+| +||.+++++..+...|++
T Consensus 114 ~~L~~~g~~~~~~~~lilG-aGGaarai~~aL~~~g~~ 150 (269)
T 3tum_A 114 GAAHKHGFEPAGKRALVIG-CGGVGSAIAYALAEAGIA 150 (269)
T ss_dssp HHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCS
T ss_pred HHHHHhCCCcccCeEEEEe-cHHHHHHHHHHHHHhCCC
Confidence 445555554 678999999 899999988888888863
No 171
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=64.00 E-value=4.5 Score=37.73 Aligned_cols=31 Identities=26% Similarity=0.163 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.-.|.+|.|+| .|.+|..+++.++.+|++|+
T Consensus 274 ~L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~ 304 (494)
T 3d64_A 274 MIAGKIAVVAG-YGDVGKGCAQSLRGLGATVW 304 (494)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEE
T ss_pred ccCCCEEEEEc-cCHHHHHHHHHHHHCCCEEE
Confidence 35789999999 99999999999999999874
No 172
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=63.95 E-value=4.4 Score=35.42 Aligned_cols=29 Identities=14% Similarity=0.044 Sum_probs=26.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 138 ~g~tvGIiG-~G~IG~~vA~~l~~~G~~V~ 166 (315)
T 3pp8_A 138 EEFSVGIMG-AGVLGAKVAESLQAWGFPLR 166 (315)
T ss_dssp TTCCEEEEC-CSHHHHHHHHHHHTTTCCEE
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHHCCCEEE
Confidence 578999999 99999999999999999874
No 173
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=63.76 E-value=5.4 Score=35.01 Aligned_cols=29 Identities=17% Similarity=0.414 Sum_probs=26.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 139 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~ 167 (324)
T 3hg7_A 139 KGRTLLILG-TGSIGQHIAHTGKHFGMKVL 167 (324)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred ccceEEEEE-ECHHHHHHHHHHHhCCCEEE
Confidence 578999999 99999999999999999874
No 174
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=63.53 E-value=4.6 Score=35.78 Aligned_cols=29 Identities=14% Similarity=0.139 Sum_probs=26.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 147 ~gktvgIiG-lG~IG~~vA~~l~~~G~~V~ 175 (343)
T 2yq5_A 147 YNLTVGLIG-VGHIGSAVAEIFSAMGAKVI 175 (343)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEEe-cCHHHHHHHHHHhhCCCEEE
Confidence 478999999 99999999999999999874
No 175
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=63.34 E-value=4.7 Score=35.53 Aligned_cols=29 Identities=17% Similarity=0.159 Sum_probs=26.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.++.|.| .|.+|..+++.++.+|++|.
T Consensus 140 ~g~tvGIiG-~G~IG~~va~~~~~fg~~v~ 168 (334)
T 3kb6_A 140 NRLTLGVIG-TGRIGSRVAMYGLAFGMKVL 168 (334)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCcEEEEEC-cchHHHHHHHhhcccCceee
Confidence 477999999 99999999999999999874
No 176
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=63.18 E-value=5.7 Score=33.89 Aligned_cols=28 Identities=14% Similarity=0.122 Sum_probs=24.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCC-cc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLE-FF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V 260 (262)
.|.+++|+| +|++|.+++..+...|+ +|
T Consensus 119 ~~k~~lvlG-aGg~~~aia~~L~~~G~~~v 147 (272)
T 3pwz_A 119 RNRRVLLLG-AGGAVRGALLPFLQAGPSEL 147 (272)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHHHHTCCSEE
T ss_pred cCCEEEEEC-ccHHHHHHHHHHHHcCCCEE
Confidence 688999999 79999999988888996 54
No 177
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=63.10 E-value=12 Score=34.41 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=27.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|.+|+|.| .|.||..+++.+..+|++|.
T Consensus 233 l~Gk~vaVQG-~GnVG~~aa~~L~e~GakvV 262 (450)
T 4fcc_A 233 FEGMRVSVSG-SGNVAQYAIEKAMEFGARVI 262 (450)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCCEEEEeC-CChHHHHHHHHHHhcCCeEE
Confidence 3689999998 99999999999999999875
No 178
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=62.68 E-value=4.9 Score=35.40 Aligned_cols=29 Identities=17% Similarity=0.159 Sum_probs=26.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 140 ~g~tvgIiG-~G~IG~~vA~~l~~~G~~V~ 168 (334)
T 2pi1_A 140 NRLTLGVIG-TGRIGSRVAMYGLAFGMKVL 168 (334)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCceEEEEC-cCHHHHHHHHHHHHCcCEEE
Confidence 467999999 99999999999999999874
No 179
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=62.30 E-value=5.1 Score=35.52 Aligned_cols=29 Identities=10% Similarity=0.204 Sum_probs=26.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 172 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~ 200 (345)
T 4g2n_A 172 TGRRLGIFG-MGRIGRAIATRARGFGLAIH 200 (345)
T ss_dssp TTCEEEEES-CSHHHHHHHHHHHTTTCEEE
T ss_pred CCCEEEEEE-eChhHHHHHHHHHHCCCEEE
Confidence 467999999 99999999999999999874
No 180
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=61.26 E-value=4.8 Score=31.81 Aligned_cols=62 Identities=13% Similarity=0.181 Sum_probs=35.1
Q ss_pred ceeeEEE-ecCCCeEECCCCCCHhhHhcccchHHHHHHHHHHc--CCCCCCEEEEEcCchHHHHHHHHHHHH
Q 024775 187 SLAEYTA-VEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERT--GFSAGKSILVLNGSGGVGSLVIQVCYY 255 (262)
Q Consensus 187 ~~ae~~~-v~~~~~~~lP~~~~~~~aa~l~~~~~tA~~al~~~--~~~~g~~VlI~Ga~G~vG~~aiqlAk~ 255 (262)
.|.+|.. .+....+.++..+.+.... ..+....++.. .++++++||-.| +|. |..+..+++.
T Consensus 17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~-----~~~~~~~~~~l~~~~~~~~~vLDiG-~G~-G~~~~~l~~~ 81 (205)
T 3grz_A 17 EWEDYQPVFKDQEIIRLDPGLAFGTGN-----HQTTQLAMLGIERAMVKPLTVADVG-TGS-GILAIAAHKL 81 (205)
T ss_dssp TTCCCCCSSTTCEEEEESCC-----CC-----HHHHHHHHHHHHHHCSSCCEEEEET-CTT-SHHHHHHHHT
T ss_pred cccccccCCCCceeEEecCCcccCCCC-----CccHHHHHHHHHHhccCCCEEEEEC-CCC-CHHHHHHHHC
Confidence 4566665 5666677777776554421 11222222222 267899999998 776 7777777764
No 181
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=61.21 E-value=14 Score=33.64 Aligned_cols=29 Identities=21% Similarity=0.134 Sum_probs=26.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|+|.| .|.||..+++++..+|++|.
T Consensus 217 ~gk~vaVqG-~GnVG~~~a~~L~~~GakVV 245 (419)
T 3aoe_E 217 RGARVVVQG-LGQVGAAVALHAERLGMRVV 245 (419)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCEEEEEC-cCHHHHHHHHHHHHCCCEEE
Confidence 689999999 99999999999999999875
No 182
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=60.95 E-value=4.5 Score=36.21 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=26.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 175 ~gktvGIIG-lG~IG~~vA~~l~~fG~~V~ 203 (365)
T 4hy3_A 175 AGSEIGIVG-FGDLGKALRRVLSGFRARIR 203 (365)
T ss_dssp SSSEEEEEC-CSHHHHHHHHHHTTSCCEEE
T ss_pred CCCEEEEec-CCcccHHHHHhhhhCCCEEE
Confidence 478999999 99999999999999999874
No 183
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=60.93 E-value=8.2 Score=30.85 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=28.5
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+....+.++++||-+| +|. |..++.+|+. +++|+
T Consensus 47 ~l~~l~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~v~ 81 (204)
T 3njr_A 47 TLAALAPRRGELLWDIG-GGS-GSVSVEWCLA-GGRAI 81 (204)
T ss_dssp HHHHHCCCTTCEEEEET-CTT-CHHHHHHHHT-TCEEE
T ss_pred HHHhcCCCCCCEEEEec-CCC-CHHHHHHHHc-CCEEE
Confidence 34567889999999998 776 8899999988 77764
No 184
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=60.64 E-value=4.1 Score=35.80 Aligned_cols=29 Identities=10% Similarity=0.070 Sum_probs=26.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~ 172 (330)
T 4e5n_A 144 DNATVGFLG-MGAIGLAMADRLQGWGATLQ 172 (330)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHTTTSCCEEE
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHHCCCEEE
Confidence 578999999 99999999999999999874
No 185
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=60.62 E-value=5.7 Score=35.40 Aligned_cols=29 Identities=21% Similarity=0.370 Sum_probs=26.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCc-cC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEF-FF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~-V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++ |+
T Consensus 163 ~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~ 192 (364)
T 2j6i_A 163 EGKTIATIG-AGRIGYRVLERLVPFNPKELL 192 (364)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHGGGCCSEEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHhCCCcEEE
Confidence 688999999 999999999999999997 63
No 186
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=60.29 E-value=10 Score=35.35 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=27.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|+|.| .|.||..+++++..+|++|.
T Consensus 243 ~g~tVaVQG-~GNVG~~aa~~L~e~GakVV 271 (501)
T 3mw9_A 243 GDKTFVVQG-FGNVGLHSMRYLHRFGAKCI 271 (501)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 689999999 99999999999999999875
No 187
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=60.28 E-value=6 Score=35.02 Aligned_cols=29 Identities=17% Similarity=0.196 Sum_probs=26.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 167 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~ 195 (347)
T 1mx3_A 167 RGETLGIIG-LGRVGQAVALRAKAFGFNVL 195 (347)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTTTCEEE
T ss_pred CCCEEEEEe-ECHHHHHHHHHHHHCCCEEE
Confidence 578999999 99999999999999998764
No 188
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=60.01 E-value=6.5 Score=34.04 Aligned_cols=29 Identities=21% Similarity=0.204 Sum_probs=26.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 123 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~ 151 (303)
T 1qp8_A 123 QGEKVAVLG-LGEIGTRVGKILAALGAQVR 151 (303)
T ss_dssp TTCEEEEES-CSTHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEE
Confidence 577999999 99999999999999998774
No 189
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=59.64 E-value=5.9 Score=34.75 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=26.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++..|++|+
T Consensus 145 ~g~~vgIIG-~G~iG~~vA~~l~~~G~~V~ 173 (333)
T 2d0i_A 145 YGKKVGILG-MGAIGKAIARRLIPFGVKLY 173 (333)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHGGGTCEEE
T ss_pred CcCEEEEEc-cCHHHHHHHHHHHHCCCEEE
Confidence 577999999 99999999999999998764
No 190
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=59.52 E-value=7.3 Score=31.66 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=27.9
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.++...++++++||-+| +| .|..++.+++..+.+|
T Consensus 83 ~~~~l~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~v 117 (235)
T 1jg1_A 83 MLEIANLKPGMNILEVG-TG-SGWNAALISEIVKTDV 117 (235)
T ss_dssp HHHHHTCCTTCCEEEEC-CT-TSHHHHHHHHHHCSCE
T ss_pred HHHhcCCCCCCEEEEEe-CC-cCHHHHHHHHHhCCEE
Confidence 44556889999999998 77 6999999998876554
No 191
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=59.29 E-value=7.2 Score=34.15 Aligned_cols=29 Identities=17% Similarity=0.269 Sum_probs=26.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++..|.+|+
T Consensus 149 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~ 177 (334)
T 2dbq_A 149 YGKTIGIIG-LGRIGQAIAKRAKGFNMRIL 177 (334)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCCEEE
Confidence 577999999 99999999999999998764
No 192
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=58.67 E-value=16 Score=33.58 Aligned_cols=29 Identities=21% Similarity=0.211 Sum_probs=26.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|+|.| .|.||..+++++..+|++|.
T Consensus 238 ~g~~VaVQG-~GnVG~~aa~~L~e~GakvV 266 (456)
T 3r3j_A 238 ENKKCLVSG-SGNVAQYLVEKLIEKGAIVL 266 (456)
T ss_dssp TTCCEEEEC-CSHHHHHHHHHHHHHTCCBC
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 688999999 89999999999999999985
No 193
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=58.56 E-value=6.3 Score=34.98 Aligned_cols=29 Identities=24% Similarity=0.355 Sum_probs=26.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 163 ~gktvGIIG-~G~IG~~vA~~l~~~G~~V~ 191 (351)
T 3jtm_A 163 EGKTIGTVG-AGRIGKLLLQRLKPFGCNLL 191 (351)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHGGGCCEEE
T ss_pred cCCEEeEEE-eCHHHHHHHHHHHHCCCEEE
Confidence 588999999 99999999999999999874
No 194
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=58.40 E-value=5.3 Score=38.23 Aligned_cols=30 Identities=13% Similarity=0.138 Sum_probs=24.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHc-CCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYY-LEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~-Ga~V~ 261 (262)
.+.+|||+||+|.+|...++.+... |.+|+
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~ 344 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVY 344 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEE
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEE
Confidence 4678999999999999988877776 66653
No 195
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=57.99 E-value=5.6 Score=37.13 Aligned_cols=29 Identities=21% Similarity=0.236 Sum_probs=22.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+++|.|| |++|.+++..+...|++|+
T Consensus 363 ~~k~vlV~Ga-GGig~aia~~L~~~G~~V~ 391 (523)
T 2o7s_A 363 ASKTVVVIGA-GGAGKALAYGAKEKGAKVV 391 (523)
T ss_dssp ---CEEEECC-SHHHHHHHHHHHHHCC-CE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEE
Confidence 4678999995 8999999999999998764
No 196
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=57.83 E-value=17 Score=33.26 Aligned_cols=29 Identities=14% Similarity=0.108 Sum_probs=26.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|+|.| .|.||..+++++..+|++|.
T Consensus 234 ~g~~vaVqG-fGnVG~~~a~~L~e~GakvV 262 (440)
T 3aog_A 234 EGARVAIQG-FGNVGNAAARAFHDHGARVV 262 (440)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCEEEEec-cCHHHHHHHHHHHHCCCEEE
Confidence 689999998 99999999999999999875
No 197
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=57.82 E-value=14 Score=34.10 Aligned_cols=29 Identities=17% Similarity=0.116 Sum_probs=27.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|+|.| .|.||..+++++..+|++|.
T Consensus 251 ~g~~vaVqG-~GnVG~~~a~~L~~~GakvV 279 (470)
T 2bma_A 251 EKQTAVVSG-SGNVALYCVQKLLHLNVKVL 279 (470)
T ss_dssp GGCEEEEEC-SSHHHHHHHHHHHHTTCEEC
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEE
Confidence 688999999 89999999999999999986
No 198
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=57.70 E-value=6.6 Score=35.47 Aligned_cols=29 Identities=10% Similarity=0.141 Sum_probs=26.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 190 ~gktvGIIG-lG~IG~~vA~~l~a~G~~V~ 218 (393)
T 2nac_A 190 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLH 218 (393)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHGGGTCEEE
T ss_pred CCCEEEEEe-ECHHHHHHHHHHHhCCCEEE
Confidence 688999999 99999999999999998874
No 199
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=57.67 E-value=8 Score=32.72 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=29.1
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++...+++|++||-+| +|. |..+..+++..|++|+
T Consensus 65 ~~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~~~~v~ 99 (302)
T 3hem_A 65 LDKLNLEPGMTLLDIG-CGW-GSTMRHAVAEYDVNVI 99 (302)
T ss_dssp HHTTCCCTTCEEEEET-CTT-SHHHHHHHHHHCCEEE
T ss_pred HHHcCCCCcCEEEEee-ccC-cHHHHHHHHhCCCEEE
Confidence 3557889999999998 775 9999999999887764
No 200
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=57.41 E-value=6.7 Score=33.42 Aligned_cols=34 Identities=12% Similarity=0.231 Sum_probs=28.0
Q ss_pred HHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 226 ERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+...++++++||-+| +|. |..+..+++..|++|+
T Consensus 84 ~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~~~~v~ 117 (318)
T 2fk8_A 84 DKLDLKPGMTLLDIG-CGW-GTTMRRAVERFDVNVI 117 (318)
T ss_dssp TTSCCCTTCEEEEES-CTT-SHHHHHHHHHHCCEEE
T ss_pred HhcCCCCcCEEEEEc-ccc-hHHHHHHHHHCCCEEE
Confidence 456788999999998 776 8889999988887764
No 201
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=57.11 E-value=16 Score=33.04 Aligned_cols=43 Identities=16% Similarity=0.105 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHcCCC-CCCEEEEEcCchHHHHHHHHHHHHcCC-cc
Q 024775 217 AIETAYEGLERTGFS-AGKSILVLNGSGGVGSLVIQVCYYYLE-FF 260 (262)
Q Consensus 217 ~~~tA~~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V 260 (262)
.+..-+.+++..+.+ ...+|+|.| +|..|..+++++..+|+ +|
T Consensus 171 ~lAall~al~l~g~~l~d~kVVi~G-AGaAG~~iA~ll~~~Ga~~I 215 (398)
T 2a9f_A 171 VLAAIFNSLKLLKKSLDEVSIVVNG-GGSAGLSITRKLLAAGATKV 215 (398)
T ss_dssp HHHHHHHHHHTTTCCTTSCEEEEEC-CSHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHhCCCCCccEEEEEC-CCHHHHHHHHHHHHcCCCeE
Confidence 333444555544433 445788888 99999999999999998 44
No 202
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=57.07 E-value=8.1 Score=35.19 Aligned_cols=29 Identities=21% Similarity=0.179 Sum_probs=26.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 155 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~ 183 (416)
T 3k5p_A 155 RGKTLGIVG-YGNIGSQVGNLAESLGMTVR 183 (416)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHHCCCEEE
Confidence 478999999 99999999999999999874
No 203
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=56.94 E-value=7.5 Score=34.35 Aligned_cols=29 Identities=24% Similarity=0.186 Sum_probs=26.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++.+|++|+
T Consensus 170 ~gktiGIIG-lG~IG~~vA~~l~~~G~~V~ 198 (340)
T 4dgs_A 170 KGKRIGVLG-LGQIGRALASRAEAFGMSVR 198 (340)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTTTCEEE
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 478999999 99999999999999998774
No 204
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=56.42 E-value=7.4 Score=32.74 Aligned_cols=27 Identities=19% Similarity=0.197 Sum_probs=23.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCC-cc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLE-FF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga-~V 260 (262)
.| +++|+| +|++|.+++..+...|+ +|
T Consensus 108 ~~-~vliiG-aGg~a~ai~~~L~~~G~~~I 135 (253)
T 3u62_A 108 KE-PVVVVG-AGGAARAVIYALLQMGVKDI 135 (253)
T ss_dssp CS-SEEEEC-CSHHHHHHHHHHHHTTCCCE
T ss_pred CC-eEEEEC-cHHHHHHHHHHHHHcCCCEE
Confidence 46 999999 89999999998888997 44
No 205
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=56.18 E-value=7.6 Score=33.92 Aligned_cols=29 Identities=10% Similarity=0.157 Sum_probs=25.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++..|.+|+
T Consensus 154 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~ 182 (330)
T 2gcg_A 154 TQSTVGIIG-LGRIGQAIARRLKPFGVQRF 182 (330)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHGGGTCCEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEE
Confidence 477899999 89999999999999998764
No 206
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=55.73 E-value=11 Score=29.80 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=28.2
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcC--CccC
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYL--EFFF 261 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G--a~V~ 261 (262)
.++...++++++||.+| +| .|..+..+++..| .+|+
T Consensus 69 ~~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~ 106 (215)
T 2yxe_A 69 MCELLDLKPGMKVLEIG-TG-CGYHAAVTAEIVGEDGLVV 106 (215)
T ss_dssp HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEE
T ss_pred HHHhhCCCCCCEEEEEC-CC-ccHHHHHHHHHhCCCCEEE
Confidence 34567889999999998 77 4999999998876 4543
No 207
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=55.67 E-value=7.7 Score=34.91 Aligned_cols=30 Identities=17% Similarity=0.041 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|.+|.|+| .|.+|...++.++.+|++|.
T Consensus 117 l~gktvGIIG-lG~IG~~vA~~l~a~G~~V~ 146 (381)
T 3oet_A 117 LRDRTIGIVG-VGNVGSRLQTRLEALGIRTL 146 (381)
T ss_dssp GGGCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCCEEEEEe-ECHHHHHHHHHHHHCCCEEE
Confidence 4689999999 99999999999999999874
No 208
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=55.40 E-value=13 Score=34.13 Aligned_cols=26 Identities=8% Similarity=0.120 Sum_probs=23.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
.+.+|+|+| +|+.|.+++..+...|+
T Consensus 185 ~~~rvlvlG-AGgAg~aia~~L~~~G~ 210 (439)
T 2dvm_A 185 SEITLALFG-AGAAGFATLRILTEAGV 210 (439)
T ss_dssp TTCCEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred cCCEEEEEC-ccHHHHHHHHHHHHcCC
Confidence 577899999 89999999999999998
No 209
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=55.36 E-value=7.8 Score=34.83 Aligned_cols=31 Identities=19% Similarity=0.082 Sum_probs=27.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
--.|.+|.|.| .|.+|...++.++.+|++|+
T Consensus 113 ~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~ 143 (380)
T 2o4c_A 113 DLAERTYGVVG-AGQVGGRLVEVLRGLGWKVL 143 (380)
T ss_dssp CGGGCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCEEEEEe-CCHHHHHHHHHHHHCCCEEE
Confidence 34788999999 99999999999999999874
No 210
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=55.29 E-value=17 Score=33.20 Aligned_cols=29 Identities=14% Similarity=0.132 Sum_probs=26.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|+|.| .|.||..+++++..+|++|.
T Consensus 220 ~g~~vaVqG-~GnVG~~aa~~l~e~GakVV 248 (424)
T 3k92_A 220 QNARIIIQG-FGNAGSFLAKFMHDAGAKVI 248 (424)
T ss_dssp GGCEEEEEC-CSHHHHHHHHHHHHHTCEEE
T ss_pred ccCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 688999999 89999999999999999874
No 211
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=55.11 E-value=15 Score=33.55 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=29.1
Q ss_pred HHcCCC-CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 226 ERTGFS-AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 226 ~~~~~~-~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+..+.. .|.+|+|.| .|.||..+++++..+|++|.
T Consensus 204 ~~~g~~l~g~~vaVqG-~GnVG~~~a~~L~~~GakvV 239 (421)
T 2yfq_A 204 KRFGIKMEDAKIAVQG-FGNVGTFTVKNIERQGGKVC 239 (421)
T ss_dssp HHTTCCGGGSCEEEEC-CSHHHHHHHHHHHHTTCCEE
T ss_pred HhcCCCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEE
Confidence 333443 688999999 99999999999999999875
No 212
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=55.00 E-value=6.5 Score=33.48 Aligned_cols=28 Identities=18% Similarity=0.145 Sum_probs=23.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+++|+| +|++|.+++..+...| +|+
T Consensus 127 ~~k~vlV~G-aGgiG~aia~~L~~~G-~V~ 154 (287)
T 1nvt_A 127 KDKNIVIYG-AGGAARAVAFELAKDN-NII 154 (287)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHTSSS-EEE
T ss_pred CCCEEEEEC-chHHHHHHHHHHHHCC-CEE
Confidence 578999999 5699999988888888 763
No 213
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=54.48 E-value=7.9 Score=34.01 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=25.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|+| .|.+|...++.++..|++|+
T Consensus 163 ~g~~vgIIG-~G~iG~~vA~~l~~~G~~V~ 191 (333)
T 3ba1_A 163 SGKRVGIIG-LGRIGLAVAERAEAFDCPIS 191 (333)
T ss_dssp TTCCEEEEC-CSHHHHHHHHHHHTTTCCEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 567899999 99999999999999998764
No 214
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=54.45 E-value=8.3 Score=41.68 Aligned_cols=30 Identities=23% Similarity=0.234 Sum_probs=26.8
Q ss_pred CCCEEEEEcCchH-HHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGG-VGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~-vG~~aiqlAk~~Ga~V~ 261 (262)
.|+++||.||+++ +|...++.+...|++|+
T Consensus 651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VV 681 (1878)
T 2uv9_A 651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVI 681 (1878)
T ss_dssp TTCEEEEESCCTTSHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHCCCEEE
Confidence 6889999999998 99999988888899874
No 215
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=54.24 E-value=8.7 Score=33.87 Aligned_cols=30 Identities=7% Similarity=0.014 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHH-HcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCY-YYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk-~~Ga~V~ 261 (262)
-.|.+|.|+| .|.+|...++.++ ..|++|+
T Consensus 161 l~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~ 191 (348)
T 2w2k_A 161 PRGHVLGAVG-LGAIQKEIARKAVHGLGMKLV 191 (348)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEEE-ECHHHHHHHHHHHHhcCCEEE
Confidence 3678999999 9999999999999 9998764
No 216
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=53.95 E-value=9.7 Score=34.41 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=26.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.++.|+| .|.+|...++.++.+|++|+
T Consensus 144 ~gktlGiIG-lG~IG~~vA~~l~~~G~~V~ 172 (404)
T 1sc6_A 144 RGKKLGIIG-YGHIGTQLGILAESLGMYVY 172 (404)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEe-ECHHHHHHHHHHHHCCCEEE
Confidence 678999999 99999999999999999874
No 217
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=53.85 E-value=9.4 Score=37.65 Aligned_cols=30 Identities=23% Similarity=0.273 Sum_probs=25.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHH-HcCCc
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCY-YYLEF 259 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk-~~Ga~ 259 (262)
+.++.++||.|++|++|+..++... ..|++
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~ 557 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGVR 557 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSCC
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCCc
Confidence 4578999999999999999887665 78985
No 218
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=53.04 E-value=21 Score=32.20 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCC-CCCCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 218 IETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 218 ~~tA~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
+..-+.+++..+. -...+|+|.| +|..|..+++++..+|+
T Consensus 176 lAal~~A~~i~g~~l~~~kVVv~G-AGaAG~~iAkll~~~G~ 216 (388)
T 1vl6_A 176 SAAFLNALKLTEKKIEEVKVVVNG-IGAAGYNIVKFLLDLGV 216 (388)
T ss_dssp HHHHHHHHHHHTCCTTTCEEEEEC-CSHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEC-CCHHHHHHHHHHHhCCC
Confidence 3334445554443 3667899998 99999999999999998
No 219
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=52.85 E-value=8.2 Score=32.63 Aligned_cols=28 Identities=36% Similarity=0.290 Sum_probs=24.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.|.+|+|+| +|++|.+++..+...|++|
T Consensus 128 ~~~~v~iiG-aG~~g~aia~~L~~~g~~V 155 (275)
T 2hk9_A 128 KEKSILVLG-AGGASRAVIYALVKEGAKV 155 (275)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHHTCEE
T ss_pred CCCEEEEEC-chHHHHHHHHHHHHcCCEE
Confidence 578999999 8999999998888888754
No 220
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=52.03 E-value=13 Score=30.22 Aligned_cols=35 Identities=20% Similarity=0.037 Sum_probs=28.4
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+....++++++||=+| +|. |..+..+++..|++|+
T Consensus 29 ~~~~~~~~~~~VLDiG-cG~-G~~~~~la~~~~~~v~ 63 (256)
T 1nkv_A 29 GRVLRMKPGTRILDLG-SGS-GEMLCTWARDHGITGT 63 (256)
T ss_dssp HHHTCCCTTCEEEEET-CTT-CHHHHHHHHHTCCEEE
T ss_pred HHhcCCCCCCEEEEEC-CCC-CHHHHHHHHhcCCeEE
Confidence 4567889999999998 776 8888999988877664
No 221
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=51.93 E-value=3.5 Score=38.02 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=24.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+..+|||.||+|.+|..+++.+...|.+|+
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~ 178 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIY 178 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEE
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEE
Confidence 456899999999999988887766666653
No 222
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=50.89 E-value=9.5 Score=41.29 Aligned_cols=31 Identities=19% Similarity=0.140 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCchH-HHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGG-VGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~-vG~~aiqlAk~~Ga~V~ 261 (262)
-.|+++||.||+++ +|...++.+...|++|+
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vv 704 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVV 704 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEE
Confidence 36899999999998 99999888888999874
No 223
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=50.08 E-value=18 Score=28.46 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=27.4
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.++...++++++||-.| +| .|..+..+++. +.+|+
T Consensus 69 ~~~~l~~~~~~~vLdiG-~G-~G~~~~~la~~-~~~v~ 103 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIG-TG-SGYQTAILAHL-VQHVC 103 (210)
T ss_dssp HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHH-SSEEE
T ss_pred HHHhcCCCCCCEEEEEc-CC-CCHHHHHHHHh-CCEEE
Confidence 34567889999999998 77 48888888887 66654
No 224
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=49.22 E-value=23 Score=32.52 Aligned_cols=29 Identities=14% Similarity=-0.026 Sum_probs=26.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|.| .|.||..+++++..+|++|.
T Consensus 229 ~g~~v~VqG-~GnVG~~~a~~L~~~GakvV 257 (449)
T 1bgv_A 229 VGKTVALAG-FGNVAWGAAKKLAELGAKAV 257 (449)
T ss_dssp TTCEEEECC-SSHHHHHHHHHHHHHTCEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEE
Confidence 789999998 99999999999999999875
No 225
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=48.81 E-value=13 Score=30.29 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=28.0
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++...++++++||-+| +| .|..+..+++..|++|+
T Consensus 48 ~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~v~ 82 (266)
T 3ujc_A 48 LSDIELNENSKVLDIG-SG-LGGGCMYINEKYGAHTH 82 (266)
T ss_dssp TTTCCCCTTCEEEEET-CT-TSHHHHHHHHHHCCEEE
T ss_pred HHhcCCCCCCEEEEEC-CC-CCHHHHHHHHHcCCEEE
Confidence 3456788999999998 76 68889999988777764
No 226
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=48.79 E-value=12 Score=31.16 Aligned_cols=27 Identities=30% Similarity=0.225 Sum_probs=23.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.| +++|+| +|.+|...+..++..|++|
T Consensus 116 ~~-~v~iiG-~G~~g~~~a~~l~~~g~~v 142 (263)
T 2d5c_A 116 KG-PALVLG-AGGAGRAVAFALREAGLEV 142 (263)
T ss_dssp CS-CEEEEC-CSHHHHHHHHHHHHTTCCE
T ss_pred CC-eEEEEC-CcHHHHHHHHHHHHCCCEE
Confidence 56 899999 8999999999888888754
No 227
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=48.34 E-value=13 Score=41.50 Aligned_cols=29 Identities=24% Similarity=0.205 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
.++.++||.||+|++|+..++.....|++
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~ 1910 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQ 1910 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCC
Confidence 36788999999999999999999899997
No 228
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=48.09 E-value=17 Score=29.44 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=28.1
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHc--CCccC
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYY--LEFFF 261 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~--Ga~V~ 261 (262)
.+....++++++||-.| +|. |..+..+++.. +.+|+
T Consensus 88 ~~~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~ 125 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAG-TGS-GGLTLFLARAVGEKGLVE 125 (258)
T ss_dssp HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEEE
T ss_pred HHHHcCCCCCCEEEEEC-CCc-CHHHHHHHHHhCCCCEEE
Confidence 44567889999999998 775 88999999885 34543
No 229
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=47.42 E-value=29 Score=30.10 Aligned_cols=49 Identities=14% Similarity=0.006 Sum_probs=37.5
Q ss_pred cccchHHHHHHHHHHcCCC-CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 213 GLPLAIETAYEGLERTGFS-AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 213 ~l~~~~~tA~~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..|+....-+..|++.++. .|.+++|.|-+.-+|.=...|+...+|+|+
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVT 207 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVT 207 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEE
Confidence 3455444445555665554 899999999999999999999999999885
No 230
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=47.40 E-value=20 Score=28.13 Aligned_cols=31 Identities=13% Similarity=0.221 Sum_probs=25.6
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHc
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYY 256 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~ 256 (262)
.+....++++++||-+| +|. |..++.+++..
T Consensus 32 ~l~~l~~~~~~~vLDiG-~G~-G~~~~~la~~~ 62 (204)
T 3e05_A 32 TLSKLRLQDDLVMWDIG-AGS-ASVSIEASNLM 62 (204)
T ss_dssp HHHHTTCCTTCEEEEET-CTT-CHHHHHHHHHC
T ss_pred HHHHcCCCCCCEEEEEC-CCC-CHHHHHHHHHC
Confidence 34567899999999998 775 88899999885
No 231
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=46.52 E-value=36 Score=30.84 Aligned_cols=29 Identities=14% Similarity=0.090 Sum_probs=26.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHH-cCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYY-YLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~-~Ga~V~ 261 (262)
.|.+|.|.| .|.||..+++++.. +|++|.
T Consensus 208 ~g~~vaVqG-~GnVG~~~a~~L~e~~GakvV 237 (415)
T 2tmg_A 208 KKATVAVQG-FGNVGQFAALLISQELGSKVV 237 (415)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHhcCCEEE
Confidence 689999999 99999999999998 999874
No 232
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=46.13 E-value=13 Score=30.93 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=27.3
Q ss_pred HHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 226 ERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+..+++++++||-+| +|. |..+..+++..|++|+
T Consensus 58 ~~~~~~~~~~vLDiG-cG~-G~~~~~l~~~~~~~v~ 91 (287)
T 1kpg_A 58 GKLGLQPGMTLLDVG-CGW-GATMMRAVEKYDVNVV 91 (287)
T ss_dssp TTTTCCTTCEEEEET-CTT-SHHHHHHHHHHCCEEE
T ss_pred HHcCCCCcCEEEEEC-Ccc-cHHHHHHHHHcCCEEE
Confidence 456788999999998 766 8888899987787664
No 233
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=46.05 E-value=8.2 Score=41.00 Aligned_cols=30 Identities=20% Similarity=0.175 Sum_probs=26.5
Q ss_pred CCCEEEEEcCchH-HHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGG-VGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~-vG~~aiqlAk~~Ga~V~ 261 (262)
.|+++||.||+++ +|.+.++.+...|++|+
T Consensus 475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VV 505 (1688)
T 2pff_A 475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVV 505 (1688)
T ss_dssp CSCCEEECSCSSSSTHHHHHHHHHHHTCEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHHCcCEEE
Confidence 5789999999998 99998888888899874
No 234
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=45.15 E-value=26 Score=28.85 Aligned_cols=29 Identities=24% Similarity=0.301 Sum_probs=22.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++++++||-.| +|. |..++.+++ +|++|+
T Consensus 118 ~~~~~~VLDiG-cG~-G~l~~~la~-~g~~v~ 146 (254)
T 2nxc_A 118 LRPGDKVLDLG-TGS-GVLAIAAEK-LGGKAL 146 (254)
T ss_dssp CCTTCEEEEET-CTT-SHHHHHHHH-TTCEEE
T ss_pred cCCCCEEEEec-CCC-cHHHHHHHH-hCCeEE
Confidence 68899999998 776 888888777 465553
No 235
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=44.92 E-value=18 Score=33.24 Aligned_cols=29 Identities=14% Similarity=0.036 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.....|+|.| +|..|+.++..+...|.+|
T Consensus 90 ~~~~dVvIVG-gG~aGl~aA~~La~~G~~V 118 (497)
T 2bry_A 90 CTNTKCLVVG-AGPCGLRAAVELALLGARV 118 (497)
T ss_dssp TTTCEEEEEC-CSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEC-ccHHHHHHHHHHHHCCCeE
Confidence 4456899999 9999999888888888876
No 236
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=44.05 E-value=15 Score=41.85 Aligned_cols=32 Identities=13% Similarity=0.055 Sum_probs=28.7
Q ss_pred CCCCCEEEEEcCchH-HHHHHHHHHHHcCCccC
Q 024775 230 FSAGKSILVLNGSGG-VGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~-vG~~aiqlAk~~Ga~V~ 261 (262)
.-.|+++||.||++| +|++.++.....|++|+
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vv 2165 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVI 2165 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEE
Confidence 357899999999999 99999999999999874
No 237
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=43.64 E-value=17 Score=33.04 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=27.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.|.+|+|.| .|.||..+++++..+|++|.
T Consensus 208 l~gk~vaVqG-~GnVG~~aa~~L~e~GakVV 237 (421)
T 1v9l_A 208 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVI 237 (421)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEE
T ss_pred cCCCEEEEEC-cCHHHHHHHHHHHHCCCEEE
Confidence 3689999999 89999999999999999875
No 238
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=43.60 E-value=16 Score=32.88 Aligned_cols=29 Identities=14% Similarity=0.006 Sum_probs=26.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+-..++|+| +|.++.+++++|+.+|.+|.
T Consensus 203 P~~rL~IfG-AGhva~ala~~a~~lg~~V~ 231 (386)
T 2we8_A 203 PRPRMLVFG-AIDFAAAVAQQGAFLGYRVT 231 (386)
T ss_dssp CCCEEEEEC-CSTHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEE
Confidence 566899999 99999999999999998774
No 239
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=43.11 E-value=22 Score=29.13 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=27.9
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++...++++++||-+| +|. |..+..+++..|++|+
T Consensus 54 ~~~~~~~~~~~vLDiG-cG~-G~~~~~l~~~~~~~v~ 88 (273)
T 3bus_A 54 IALLDVRSGDRVLDVG-CGI-GKPAVRLATARDVRVT 88 (273)
T ss_dssp HHHSCCCTTCEEEEES-CTT-SHHHHHHHHHSCCEEE
T ss_pred HHhcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCEEE
Confidence 3567888999999998 665 8888889888777664
No 240
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=42.72 E-value=22 Score=29.30 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=27.6
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHc--CCccC
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYY--LEFFF 261 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~--Ga~V~ 261 (262)
.+....+++|++||-.| +| .|..+..+++.. +.+|+
T Consensus 91 i~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~ 128 (280)
T 1i9g_A 91 IVHEGDIFPGARVLEAG-AG-SGALTLSLLRAVGPAGQVI 128 (280)
T ss_dssp HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEE
T ss_pred HHHHcCCCCCCEEEEEc-cc-ccHHHHHHHHHhCCCCEEE
Confidence 34567899999999998 77 688888999875 34443
No 241
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=42.14 E-value=33 Score=29.81 Aligned_cols=35 Identities=23% Similarity=0.186 Sum_probs=28.6
Q ss_pred HHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 226 ERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
++..+++|++|+|...+|..|++++..|+.+|.++
T Consensus 64 ~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~ 98 (334)
T 3tbh_A 64 KEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKV 98 (334)
T ss_dssp HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEE
T ss_pred HcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCE
Confidence 34457899997666669999999999999999865
No 242
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=41.60 E-value=15 Score=30.70 Aligned_cols=32 Identities=13% Similarity=0.033 Sum_probs=27.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
....+++|+|.| .|.+|+-.++.+..+|.+|+
T Consensus 148 ~~~~~~~vvViG-gG~ig~e~A~~l~~~G~~Vt 179 (314)
T 4a5l_A 148 PIFRNKVLMVVG-GGDAAMEEALHLTKYGSKVI 179 (314)
T ss_dssp GGGTTSEEEEEC-SSHHHHHHHHHHTTTSSEEE
T ss_pred hhcCCCeEEEEC-CChHHHHHHHHHHHhCCeee
Confidence 345688999999 89999999999999998874
No 243
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=41.09 E-value=17 Score=30.48 Aligned_cols=25 Identities=12% Similarity=0.048 Sum_probs=20.6
Q ss_pred EEEEEcCchHHHHHHHHHHHHc-CCcc
Q 024775 235 SILVLNGSGGVGSLVIQVCYYY-LEFF 260 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~-Ga~V 260 (262)
.|+|.| +|..|+.++..+... |.+|
T Consensus 41 dVvIIG-gG~aGl~aA~~la~~~G~~V 66 (284)
T 1rp0_A 41 DVVVVG-AGSAGLSAAYEISKNPNVQV 66 (284)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTSTTSCE
T ss_pred CEEEEC-ccHHHHHHHHHHHHcCCCeE
Confidence 588998 999999987777776 8776
No 244
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=41.08 E-value=17 Score=33.49 Aligned_cols=26 Identities=12% Similarity=-0.065 Sum_probs=21.8
Q ss_pred EEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 235 SILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
-|+|+| +|..|++++..|...|++|.
T Consensus 43 DVvVVG-aG~AGl~AA~~aa~~G~~V~ 68 (510)
T 4at0_A 43 DVVVAG-YGIAGVAASIEAARAGADVL 68 (510)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCcEE
Confidence 478888 99999998888888898774
No 245
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=40.31 E-value=8.4 Score=31.23 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=26.6
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcC-CccC
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYL-EFFF 261 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G-a~V~ 261 (262)
++...++++++||-+| +|. |..+..+++..| .+|+
T Consensus 67 l~~~~~~~~~~VLDlG-cG~-G~~~~~la~~~~~~~v~ 102 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLG-ASA-GTTPSHVADIADKGIVY 102 (230)
T ss_dssp CCCCCCCTTCEEEEES-CCS-SHHHHHHHHHTTTSEEE
T ss_pred ccccCCCCCCEEEEEc-ccC-CHHHHHHHHHcCCcEEE
Confidence 3445678999999998 776 888889998876 4443
No 246
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=40.02 E-value=17 Score=34.02 Aligned_cols=26 Identities=15% Similarity=0.084 Sum_probs=22.1
Q ss_pred EEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 235 SILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+|+| +|..|++++..|...|++|.
T Consensus 123 DVvVVG-~G~aGl~aA~~la~~G~~V~ 148 (566)
T 1qo8_A 123 QVLVVG-AGSAGFNASLAAKKAGANVI 148 (566)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHHTCCEE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCcEE
Confidence 588888 99999998888888898773
No 247
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=39.97 E-value=21 Score=32.33 Aligned_cols=29 Identities=17% Similarity=0.057 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.....|+|+| +|..|+.++..++..|.+|
T Consensus 31 ~~~~~v~IiG-aG~~Gl~aA~~l~~~g~~v 59 (498)
T 2iid_A 31 SNPKHVVIVG-AGMAGLSAAYVLAGAGHQV 59 (498)
T ss_dssp SSCCEEEEEC-CBHHHHHHHHHHHHHTCEE
T ss_pred CCCCCEEEEC-CCHHHHHHHHHHHhCCCeE
Confidence 4456899999 9999999999888888876
No 248
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=39.79 E-value=18 Score=33.84 Aligned_cols=26 Identities=19% Similarity=0.155 Sum_probs=22.1
Q ss_pred EEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 235 SILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+|+| +|..|+.++..|...|++|.
T Consensus 128 DVvVVG-aG~aGl~aA~~la~~G~~V~ 153 (571)
T 1y0p_A 128 DVVVVG-SGGAGFSAAISATDSGAKVI 153 (571)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCcEE
Confidence 588888 99999998888888898773
No 249
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=39.70 E-value=30 Score=28.05 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=27.4
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHc--CCcc
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYY--LEFF 260 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~--Ga~V 260 (262)
.+....+++|++||-.| +|. |..+..+++.. +.+|
T Consensus 85 i~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v 121 (255)
T 3mb5_A 85 IVAYAGISPGDFIVEAG-VGS-GALTLFLANIVGPEGRV 121 (255)
T ss_dssp HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEE
T ss_pred HHHhhCCCCCCEEEEec-CCc-hHHHHHHHHHhCCCeEE
Confidence 34567899999999998 776 88889999885 4444
No 250
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=39.56 E-value=17 Score=30.53 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=25.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..++++|+|.| .|.+|+-.++.++.+|.+|+
T Consensus 142 ~~~~k~vvViG-gG~ig~E~A~~l~~~g~~Vt 172 (312)
T 4gcm_A 142 FFKNKRLFVIG-GGDSAVEEGTFLTKFADKVT 172 (312)
T ss_dssp GGTTCEEEEEC-CSHHHHHHHHHHTTTCSEEE
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhcCCEEE
Confidence 34578999999 89999988888888888763
No 251
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=39.46 E-value=20 Score=32.62 Aligned_cols=28 Identities=18% Similarity=0.013 Sum_probs=23.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.+..|+|.| +|..|+.++..++..|.+|
T Consensus 121 ~~~~V~IIG-gGpAGl~aA~~L~~~G~~V 148 (456)
T 2vdc_G 121 LGLSVGVIG-AGPAGLAAAEELRAKGYEV 148 (456)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCeE
Confidence 467799999 9999999888888888765
No 252
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=39.21 E-value=24 Score=30.29 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=26.3
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcC
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYL 257 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G 257 (262)
.+....+++|++||-.| +|. |..++.+++..|
T Consensus 97 ~l~~l~~~~g~~VLDiG-~G~-G~~~~~la~~~g 128 (336)
T 2b25_A 97 ILSMMDINPGDTVLEAG-SGS-GGMSLFLSKAVG 128 (336)
T ss_dssp HHHHHTCCTTCEEEEEC-CTT-SHHHHHHHHHHC
T ss_pred HHHhcCCCCCCEEEEeC-CCc-CHHHHHHHHHhC
Confidence 44567889999999998 777 888888888876
No 253
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=38.66 E-value=27 Score=30.84 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=23.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
.+.+|+|.| +|++|..+++.+...|..
T Consensus 33 ~~~~VlIvG-aGGlGs~va~~La~aGVg 59 (340)
T 3rui_A 33 KNTKVLLLG-AGTLGCYVSRALIAWGVR 59 (340)
T ss_dssp HTCEEEEEC-CSHHHHHHHHHHHHTTCC
T ss_pred hCCEEEEEC-CCHHHHHHHHHHHHcCCC
Confidence 467899999 999999999988888863
No 254
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=38.40 E-value=27 Score=27.76 Aligned_cols=27 Identities=19% Similarity=0.268 Sum_probs=23.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcC
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYL 257 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G 257 (262)
.++++++||-+| +|. |..+..+++..+
T Consensus 77 ~~~~~~~VLdiG-~G~-G~~~~~la~~~~ 103 (227)
T 2pbf_A 77 VLKPGSRAIDVG-SGS-GYLTVCMAIKMN 103 (227)
T ss_dssp TSCTTCEEEEES-CTT-SHHHHHHHHHTT
T ss_pred hCCCCCEEEEEC-CCC-CHHHHHHHHHhc
Confidence 688999999998 776 888899998876
No 255
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=36.21 E-value=24 Score=33.19 Aligned_cols=25 Identities=16% Similarity=0.028 Sum_probs=21.4
Q ss_pred EEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 235 SILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.|+|.| +|.+|++++..+...|.+|
T Consensus 51 DVvIVG-aG~aGL~~A~~La~~G~~V 75 (570)
T 3fmw_A 51 DVVVVG-GGPVGLMLAGELRAGGVGA 75 (570)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHTTCCE
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCCE
Confidence 488888 9999999888888888876
No 256
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=36.10 E-value=14 Score=33.05 Aligned_cols=30 Identities=7% Similarity=0.083 Sum_probs=26.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+-..++|+| +|.++++++++|+.+|.+|.
T Consensus 197 ~p~~~L~I~G-aGhva~aLa~la~~lgf~V~ 226 (362)
T 3on5_A 197 SPKERLIIFG-AGPDVPPLVTFASNVGFYTV 226 (362)
T ss_dssp CCCEEEEEEC-CSTTHHHHHHHHHHHTEEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCeEE
Confidence 4566899999 99999999999999998763
No 257
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=34.58 E-value=21 Score=28.52 Aligned_cols=27 Identities=30% Similarity=0.394 Sum_probs=22.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcC
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYL 257 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G 257 (262)
.++++++||-+| +|. |..+..+++..|
T Consensus 81 ~~~~~~~VLdiG-~G~-G~~~~~la~~~~ 107 (227)
T 1r18_A 81 HLKPGARILDVG-SGS-GYLTACFYRYIK 107 (227)
T ss_dssp TCCTTCEEEEES-CTT-SHHHHHHHHHHH
T ss_pred hCCCCCEEEEEC-CCc-cHHHHHHHHhcc
Confidence 578999999998 776 888888888765
No 258
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=34.17 E-value=22 Score=27.43 Aligned_cols=27 Identities=15% Similarity=0.301 Sum_probs=21.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHc
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYY 256 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~ 256 (262)
..++||.|||.| +|+++..+-++++.+
T Consensus 135 ~~~~gDvVLv~G-sg~~~~~~~~l~~~l 161 (163)
T 3mvn_A 135 QAKPNDHILIMS-NGAFGGIHQKLLTAL 161 (163)
T ss_dssp HCCTTCEEEEEC-SSCGGGHHHHHHHHT
T ss_pred hCCCCCEEEEEC-CCCHHHHHHHHHHHH
Confidence 368999999998 888888777776654
No 259
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=34.11 E-value=53 Score=28.63 Aligned_cols=35 Identities=20% Similarity=0.180 Sum_probs=29.3
Q ss_pred HHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 226 ERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
++..+++|+..+|...+|..|++++..|+.+|.++
T Consensus 79 ~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~ 113 (344)
T 3vc3_A 79 EKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKM 113 (344)
T ss_dssp HTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEE
T ss_pred HcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcE
Confidence 44568888877777779999999999999999864
No 260
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=34.05 E-value=34 Score=30.27 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=27.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+..+++|+|.| +|.+|+-++..++.+|.+|+
T Consensus 141 ~~~~~~~vvViG-gG~~g~E~A~~l~~~g~~Vt 172 (408)
T 2gqw_A 141 GLRPQSRLLIVG-GGVIGLELAATARTAGVHVS 172 (408)
T ss_dssp TCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred HhhcCCeEEEEC-CCHHHHHHHHHHHhCCCEEE
Confidence 456789999998 89999999999888888763
No 261
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=33.68 E-value=24 Score=31.08 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=19.7
Q ss_pred EEEEEcCchHHHHHHHHHHHHc--CCcc
Q 024775 235 SILVLNGSGGVGSLVIQVCYYY--LEFF 260 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~--Ga~V 260 (262)
.|+|+| +|.+|++++..+... |.+|
T Consensus 38 dVvIIG-aGi~Gls~A~~La~~~pG~~V 64 (405)
T 3c4n_A 38 DIVVIG-AGRMGAACAFYLRQLAPGRSL 64 (405)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHHCTTSCE
T ss_pred CEEEEC-CcHHHHHHHHHHHhcCCCCeE
Confidence 588888 999998877666666 7766
No 262
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=33.08 E-value=31 Score=26.09 Aligned_cols=30 Identities=7% Similarity=0.092 Sum_probs=23.4
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHc
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYY 256 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~ 256 (262)
+....+.++++||-.| +|. |..+..+++..
T Consensus 26 ~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~ 55 (192)
T 1l3i_A 26 MCLAEPGKNDVAVDVG-CGT-GGVTLELAGRV 55 (192)
T ss_dssp HHHHCCCTTCEEEEES-CTT-SHHHHHHHTTS
T ss_pred HHhcCCCCCCEEEEEC-CCC-CHHHHHHHHhc
Confidence 3556788999999998 766 88887777654
No 263
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=32.83 E-value=29 Score=32.38 Aligned_cols=29 Identities=28% Similarity=0.398 Sum_probs=26.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|.+|.|.| .|.+|...++.++.+|++|+
T Consensus 141 ~g~~vgIIG-~G~IG~~vA~~l~~~G~~V~ 169 (529)
T 1ygy_A 141 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVV 169 (529)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTTTCEEE
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCEEE
Confidence 578999999 99999999999999998764
No 264
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=32.71 E-value=39 Score=30.01 Aligned_cols=28 Identities=18% Similarity=0.087 Sum_probs=23.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
....|+|+| +|..|+.++..++..|.+|
T Consensus 43 ~~~~V~IIG-AGiaGL~aA~~L~~~G~~V 70 (376)
T 2e1m_A 43 PPKRILIVG-AGIAGLVAGDLLTRAGHDV 70 (376)
T ss_dssp SCCEEEEEC-CBHHHHHHHHHHHHTSCEE
T ss_pred CCceEEEEC-CCHHHHHHHHHHHHCCCcE
Confidence 456799999 9999999888888888765
No 265
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=31.96 E-value=40 Score=26.68 Aligned_cols=27 Identities=22% Similarity=0.218 Sum_probs=22.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcC
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYL 257 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G 257 (262)
.++++++||-.| +|. |..+..+++..|
T Consensus 74 ~~~~~~~vLDiG-~G~-G~~~~~la~~~~ 100 (226)
T 1i1n_A 74 QLHEGAKALDVG-SGS-GILTACFARMVG 100 (226)
T ss_dssp TSCTTCEEEEET-CTT-SHHHHHHHHHHC
T ss_pred hCCCCCEEEEEc-CCc-CHHHHHHHHHhC
Confidence 378999999998 665 888888888775
No 266
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=31.84 E-value=28 Score=29.59 Aligned_cols=26 Identities=8% Similarity=0.066 Sum_probs=18.6
Q ss_pred EEEEEcCchHHHHHHHH-HHHH-cCCccC
Q 024775 235 SILVLNGSGGVGSLVIQ-VCYY-YLEFFF 261 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiq-lAk~-~Ga~V~ 261 (262)
-|+|.| +|+-|+.++. +++. .|.+|.
T Consensus 67 DV~IIG-aGPAGlsAA~~la~~r~G~~V~ 94 (326)
T 3fpz_A 67 DVIIVG-AGSSGLSAAYVIAKNRPDLKVC 94 (326)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHHCTTSCEE
T ss_pred CEEEEC-CCHHHHHHHHHHHHhCCCCeEE
Confidence 478888 9999988655 5543 587763
No 267
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=31.47 E-value=23 Score=33.66 Aligned_cols=26 Identities=12% Similarity=-0.026 Sum_probs=21.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHH-cCCcc
Q 024775 234 KSILVLNGSGGVGSLVIQVCYY-YLEFF 260 (262)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlAk~-~Ga~V 260 (262)
-.|+|.| +|..|++++..+.. .|.+|
T Consensus 33 ~dVlIVG-aGpaGL~~A~~La~~~G~~V 59 (639)
T 2dkh_A 33 VDVLIVG-CGPAGLTLAAQLAAFPDIRT 59 (639)
T ss_dssp EEEEEEC-CSHHHHHHHHHHTTCTTSCE
T ss_pred CcEEEEC-cCHHHHHHHHHHHHhCCCCE
Confidence 4689998 99999998887777 78765
No 268
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=31.44 E-value=35 Score=29.35 Aligned_cols=26 Identities=19% Similarity=0.248 Sum_probs=22.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
.+.+|+|.| +|++|..+++.+...|.
T Consensus 35 ~~~~VlVvG-aGGlGs~va~~La~aGV 60 (292)
T 3h8v_A 35 RTFAVAIVG-VGGVGSVTAEMLTRCGI 60 (292)
T ss_dssp GGCEEEEEC-CSHHHHHHHHHHHHHTC
T ss_pred hCCeEEEEC-cCHHHHHHHHHHHHcCC
Confidence 456899999 99999998888887775
No 269
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=31.05 E-value=30 Score=32.46 Aligned_cols=25 Identities=8% Similarity=0.021 Sum_probs=19.5
Q ss_pred EEEEEcCchHHHHHHHHHHHHc------CCcc
Q 024775 235 SILVLNGSGGVGSLVIQVCYYY------LEFF 260 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~------Ga~V 260 (262)
.|+|.| +|..|++++..++.. |.+|
T Consensus 37 DVvIVG-aG~aGlaaA~~La~~~~~~~~G~~V 67 (584)
T 2gmh_A 37 DVVIVG-AGPAGLSAATRLKQLAAQHEKDLRV 67 (584)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred CEEEEC-cCHHHHHHHHHHHhcccccCCCCcE
Confidence 478888 999999877766666 7765
No 270
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=30.90 E-value=43 Score=28.50 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=25.2
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcC
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYL 257 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G 257 (262)
++...+++|++||-+| +|. |..++.+++..+
T Consensus 68 ~~~l~~~~~~~VLDiG-cG~-G~~~~~la~~~~ 98 (317)
T 1dl5_A 68 MEWVGLDKGMRVLEIG-GGT-GYNAAVMSRVVG 98 (317)
T ss_dssp HHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHC
T ss_pred HHhcCCCCcCEEEEec-CCc-hHHHHHHHHhcC
Confidence 4567889999999998 776 888888888753
No 271
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=30.20 E-value=29 Score=33.08 Aligned_cols=27 Identities=7% Similarity=-0.055 Sum_probs=22.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 234 KSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..|+|+| +|..|++++..+...|.+|.
T Consensus 273 ~DVvIIG-gGiaGlsaA~~La~~G~~V~ 299 (676)
T 3ps9_A 273 REAAIIG-GGIASALLSLALLRRGWQVT 299 (676)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTTCEEE
T ss_pred CCEEEEC-CCHHHHHHHHHHHHCCCeEE
Confidence 4689999 99999998888888898773
No 272
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=30.13 E-value=19 Score=29.90 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=26.5
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
+++...++||++||=+| +|. |..+..+|+..|.
T Consensus 69 gl~~l~ikpG~~VldlG-~G~-G~~~~~la~~VG~ 101 (233)
T 4df3_A 69 GLIELPVKEGDRILYLG-IAS-GTTASHMSDIIGP 101 (233)
T ss_dssp TCSCCCCCTTCEEEEET-CTT-SHHHHHHHHHHCT
T ss_pred chhhcCCCCCCEEEEec-CcC-CHHHHHHHHHhCC
Confidence 34567899999999998 555 8888889888764
No 273
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=29.96 E-value=45 Score=29.72 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=26.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+..+++|+|.| +|.+|+-++..++..|.+|+
T Consensus 145 ~l~~~~~vvViG-gG~~g~E~A~~l~~~G~~Vt 176 (431)
T 1q1r_A 145 QLIADNRLVVIG-GGYIGLEVAATAIKANMHVT 176 (431)
T ss_dssp TCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred HhhcCCeEEEEC-CCHHHHHHHHHHHhCCCEEE
Confidence 456689999998 89999999999988888763
No 274
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=29.95 E-value=78 Score=28.64 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..+++|+|.| +|.+|+-.+..++.+|.+|+
T Consensus 192 ~~~~~vvVIG-gG~ig~E~A~~l~~~g~~Vt 221 (490)
T 2bc0_A 192 KDIKRVAVVG-AGYIGVELAEAFQRKGKEVV 221 (490)
T ss_dssp TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCceEEEEC-CCHHHHHHHHHHHHCCCeEE
Confidence 5678999998 89999998888888888763
No 275
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=29.55 E-value=42 Score=29.48 Aligned_cols=25 Identities=20% Similarity=0.309 Sum_probs=21.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
+.+|+|.| +|++|..++..+...|.
T Consensus 118 ~~~VlvvG-~GglGs~va~~La~aGv 142 (353)
T 3h5n_A 118 NAKVVILG-CGGIGNHVSVILATSGI 142 (353)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHHTC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHhCCC
Confidence 56899999 89999998888888886
No 276
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=28.88 E-value=33 Score=32.88 Aligned_cols=26 Identities=15% Similarity=0.073 Sum_probs=21.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 235 SILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+|+| +|..|++++..+...|.+|.
T Consensus 266 DVvIIG-gGiaGlsaA~~La~~G~~V~ 291 (689)
T 3pvc_A 266 DIAIIG-GGIVSALTALALQRRGAVVT 291 (689)
T ss_dssp SEEEEC-CSHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEC-CcHHHHHHHHHHHHCCCcEE
Confidence 588888 99999998888888898773
No 277
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=28.58 E-value=37 Score=28.66 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=26.4
Q ss_pred HHcC-CCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 226 ERTG-FSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 226 ~~~~-~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+... ++++++||=+| +|. |..+..+++..|++|+
T Consensus 110 ~~l~~~~~~~~vLDiG-cG~-G~~~~~la~~~~~~v~ 144 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAG-CGR-GGSMVMAHRRFGSRVE 144 (312)
T ss_dssp TTSCCCCTTCEEEEES-CTT-SHHHHHHHHHHCCEEE
T ss_pred HHhccCCCCCEEEEec-CCC-CHHHHHHHHHcCCEEE
Confidence 3444 78999999998 665 8888889888777764
No 278
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=28.49 E-value=44 Score=32.00 Aligned_cols=27 Identities=15% Similarity=0.002 Sum_probs=22.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
...|+|.| +|..|+.++..++..|.+|
T Consensus 391 ~~~VvIIG-gG~AGl~aA~~La~~G~~V 417 (690)
T 3k30_A 391 DARVLVVG-AGPSGLEAARALGVRGYDV 417 (690)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCEE
T ss_pred cceEEEEC-CCHHHHHHHHHHHHCCCeE
Confidence 45799999 9999999888888888876
No 279
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=28.49 E-value=50 Score=26.11 Aligned_cols=33 Identities=15% Similarity=0.288 Sum_probs=25.1
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
++...+.++++||-+| +|. |..+..+++.. .+|
T Consensus 63 ~~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~~-~~v 95 (231)
T 1vbf_A 63 LDELDLHKGQKVLEIG-TGI-GYYTALIAEIV-DKV 95 (231)
T ss_dssp HHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHS-SEE
T ss_pred HHhcCCCCCCEEEEEc-CCC-CHHHHHHHHHc-CEE
Confidence 4556788999999998 776 88888888763 444
No 280
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=28.32 E-value=42 Score=27.87 Aligned_cols=31 Identities=13% Similarity=-0.041 Sum_probs=25.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+.++.+||-+| +| .|..+..+++..|++|+
T Consensus 79 ~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~ 109 (297)
T 2o57_A 79 VLQRQAKGLDLG-AG-YGGAARFLVRKFGVSID 109 (297)
T ss_dssp CCCTTCEEEEET-CT-TSHHHHHHHHHHCCEEE
T ss_pred CCCCCCEEEEeC-CC-CCHHHHHHHHHhCCEEE
Confidence 788999999998 66 58888888888777653
No 281
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=28.31 E-value=46 Score=29.71 Aligned_cols=29 Identities=14% Similarity=0.060 Sum_probs=25.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+.+++|.| +|.+|+-++..++.+|.+|+
T Consensus 148 ~~~~vvIiG-~G~~g~e~A~~l~~~g~~Vt 176 (447)
T 1nhp_A 148 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVT 176 (447)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCeEE
Confidence 678899998 89999999999988898763
No 282
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=28.26 E-value=49 Score=29.20 Aligned_cols=32 Identities=13% Similarity=0.167 Sum_probs=26.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+..+++|+|.| .|.+|+-++..++.+|.+|+
T Consensus 139 ~~~~~~~vvViG-gG~~g~E~A~~l~~~g~~Vt 170 (410)
T 3ef6_A 139 SWTSATRLLIVG-GGLIGCEVATTARKLGLSVT 170 (410)
T ss_dssp HCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred HhccCCeEEEEC-CCHHHHHHHHHHHhCCCeEE
Confidence 456789999999 89999998888888888763
No 283
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=28.08 E-value=25 Score=28.16 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=24.2
Q ss_pred cCCCCCCEEEEEcCchHHHHHHHHHHHHc-CCccC
Q 024775 228 TGFSAGKSILVLNGSGGVGSLVIQVCYYY-LEFFF 261 (262)
Q Consensus 228 ~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~-Ga~V~ 261 (262)
....++++||-+| +| .|..++.+++.. +.+|+
T Consensus 50 ~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~v~ 82 (233)
T 2gpy_A 50 LKMAAPARILEIG-TA-IGYSAIRMAQALPEATIV 82 (233)
T ss_dssp HHHHCCSEEEEEC-CT-TSHHHHHHHHHCTTCEEE
T ss_pred HhccCCCEEEEec-CC-CcHHHHHHHHHCCCCEEE
Confidence 3456788999998 76 688888999887 45543
No 284
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=27.96 E-value=40 Score=30.39 Aligned_cols=26 Identities=12% Similarity=-0.083 Sum_probs=21.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 234 KSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
..|+|+| +|..|++++..++..|.+|
T Consensus 40 ~~v~iiG-aG~aGl~aA~~l~~~g~~v 65 (495)
T 2vvm_A 40 WDVIVIG-GGYCGLTATRDLTVAGFKT 65 (495)
T ss_dssp EEEEEEC-CBHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEC-CcHHHHHHHHHHHHCCCCE
Confidence 3688988 8999999988888888765
No 285
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=27.80 E-value=43 Score=32.36 Aligned_cols=28 Identities=21% Similarity=0.163 Sum_probs=23.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
....|+|+| +|..|+.++..++..|.+|
T Consensus 388 ~~~~VvIIG-gGpAGl~aA~~L~~~G~~V 415 (729)
T 1o94_A 388 NKDSVLIVG-AGPSGSEAARVLMESGYTV 415 (729)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHHTTCEE
T ss_pred CCceEEEEC-CCHHHHHHHHHHHHCCCeE
Confidence 356899999 9999999998888888765
No 286
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=27.52 E-value=35 Score=32.05 Aligned_cols=26 Identities=15% Similarity=-0.086 Sum_probs=21.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 234 KSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
..|+|.| +|..|++++..+...|.+|
T Consensus 108 ~DVVIVG-gGpaGL~aA~~La~~G~kV 133 (549)
T 3nlc_A 108 ERPIVIG-FGPCGLFAGLVLAQMGFNP 133 (549)
T ss_dssp CCCEEEC-CSHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEC-cCHHHHHHHHHHHHCCCeE
Confidence 4588888 9999999877777788876
No 287
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=26.99 E-value=47 Score=31.65 Aligned_cols=28 Identities=11% Similarity=0.074 Sum_probs=23.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.+..|+|+| +|..|+.++..+...|.+|
T Consensus 106 ~~~~v~viG-~G~~gl~~a~~l~~~g~~v 133 (662)
T 2z3y_A 106 KTGKVIIIG-SGVSGLAAARQLQSFGMDV 133 (662)
T ss_dssp CCCEEEEEC-CBHHHHHHHHHHHHTTCEE
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCeE
Confidence 457899999 9999999988888888765
No 288
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=26.75 E-value=46 Score=31.70 Aligned_cols=26 Identities=19% Similarity=0.324 Sum_probs=22.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
.+.+|+|.| +|++|..+++.+...|.
T Consensus 326 ~~~kVLIVG-aGGLGs~va~~La~aGV 351 (598)
T 3vh1_A 326 KNTKVLLLG-AGTLGCYVSRALIAWGV 351 (598)
T ss_dssp HTCEEEEEC-CSHHHHHHHHHHHTTTC
T ss_pred hCCeEEEEC-CCHHHHHHHHHHHHcCC
Confidence 357899999 99999999998888886
No 289
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=26.68 E-value=1.1e+02 Score=26.54 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=27.3
Q ss_pred HHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 226 ERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
++..+++|++|+..+ +|..|++++..|+.+|.++
T Consensus 71 ~~g~~~~g~~vv~aS-sGN~g~alA~aa~~~G~~~ 104 (343)
T 2pqm_A 71 KDGRLKPGMEIIEST-SGNTGIALCQAGAVFGYRV 104 (343)
T ss_dssp HHTSSCTTCEEEEEC-SSHHHHHHHHHHHHHTCCE
T ss_pred HcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCE
Confidence 344567888777766 8999999999999999865
No 290
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=26.60 E-value=43 Score=30.76 Aligned_cols=26 Identities=8% Similarity=-0.041 Sum_probs=21.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 234 KSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
..|+|+| +|..|+.++.-++..|.+|
T Consensus 44 ~dVvIIG-gG~aGl~aA~~l~~~G~~V 69 (523)
T 1mo9_A 44 YDAIFIG-GGAAGRFGSAYLRAMGGRQ 69 (523)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEC-CCHHHHHHHHHHHHCCCCE
Confidence 4588888 8999998888887778876
No 291
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=26.58 E-value=47 Score=30.58 Aligned_cols=27 Identities=15% Similarity=0.043 Sum_probs=22.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.-.|+|.| +|..|+.++..++..|.+|
T Consensus 212 ~~dVvIIG-gG~AGl~aA~~la~~G~~v 238 (521)
T 1hyu_A 212 AYDVLIVG-SGPAGAAAAVYSARKGIRT 238 (521)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHTTCCE
T ss_pred cccEEEEC-CcHHHHHHHHHHHhCCCeE
Confidence 34689999 9999999888888888765
No 292
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=26.48 E-value=52 Score=31.43 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=23.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
.+.+|+|.| +|++|..+++.+...|..
T Consensus 325 ~~arVLIVG-aGGLGs~vA~~La~aGVG 351 (615)
T 4gsl_A 325 KNTKVLLLG-AGTLGCYVSRALIAWGVR 351 (615)
T ss_dssp HTCEEEEEC-CSHHHHHHHHHHHHTTCC
T ss_pred hCCeEEEEC-CCHHHHHHHHHHHHcCCC
Confidence 467899999 999999999988888863
No 293
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=25.97 E-value=45 Score=29.35 Aligned_cols=25 Identities=16% Similarity=0.119 Sum_probs=18.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHc--CCcc
Q 024775 235 SILVLNGSGGVGSLVIQVCYYY--LEFF 260 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~--Ga~V 260 (262)
.|+|.| +|..|+.++..+... |.+|
T Consensus 81 DVvIVG-gG~AGL~aA~~La~~~~G~~V 107 (344)
T 3jsk_A 81 DIVIVG-AGSCGLSAAYVLSTLRPDLRI 107 (344)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHHCTTSCE
T ss_pred CEEEEC-ccHHHHHHHHHHHhcCCCCEE
Confidence 478888 899998865555544 7765
No 294
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=25.90 E-value=52 Score=27.98 Aligned_cols=29 Identities=7% Similarity=-0.191 Sum_probs=23.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++++|+|.| +|.+|.-++..+...|.+|+
T Consensus 165 ~~~~vvVvG-~G~~g~e~a~~l~~~g~~V~ 193 (369)
T 3d1c_A 165 NKGQYVVIG-GNESGFDAAYQLAKNGSDIA 193 (369)
T ss_dssp CSSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEC-CCcCHHHHHHHHHhcCCeEE
Confidence 578899998 88999887777777787663
No 295
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=25.72 E-value=1.1e+02 Score=25.86 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=26.8
Q ss_pred HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 227 RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
+..+++|++|+..+ +|..|++++..|+.+|.++
T Consensus 55 ~g~~~~g~~vv~~s-sGN~g~a~A~~a~~~G~~~ 87 (303)
T 2v03_A 55 RGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRM 87 (303)
T ss_dssp TTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEE
T ss_pred cCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCcE
Confidence 34567788777766 8999999999999999865
No 296
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=25.66 E-value=56 Score=28.58 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=21.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
+.+|+|.| +|++|..++..+...|.
T Consensus 36 ~~~VlivG-~GGlG~~ia~~La~~Gv 60 (346)
T 1y8q_A 36 ASRVLLVG-LKGLGAEIAKNLILAGV 60 (346)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHHTC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCC
Confidence 46899999 99999998888888776
No 297
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=25.34 E-value=57 Score=28.34 Aligned_cols=30 Identities=13% Similarity=0.027 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..+++++|.| +|.+|+-++..++.+|.+|+
T Consensus 143 ~~~~~v~ViG-gG~~g~e~A~~l~~~g~~Vt 172 (384)
T 2v3a_A 143 AGKRRVLLLG-AGLIGCEFANDLSSGGYQLD 172 (384)
T ss_dssp TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred ccCCeEEEEC-CCHHHHHHHHHHHhCCCeEE
Confidence 3578999998 89999999999988888763
No 298
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=25.28 E-value=47 Score=30.48 Aligned_cols=27 Identities=11% Similarity=0.183 Sum_probs=21.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.-.|+|+| +|.-|+.++..+..+|.+|
T Consensus 32 ~~DVvVIG-gGpaGl~aA~~la~~G~~V 58 (519)
T 3qfa_A 32 DYDLIIIG-GGSGGLAAAKEAAQYGKKV 58 (519)
T ss_dssp SEEEEEEC-CSHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEC-CCHHHHHHHHHHHhCCCeE
Confidence 34688888 8999998888888888876
No 299
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.27 E-value=52 Score=29.55 Aligned_cols=29 Identities=10% Similarity=-0.022 Sum_probs=24.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++|+|.| +|.+|+-++..++.+|.+|+
T Consensus 170 ~~~~vvViG-gG~~g~e~A~~l~~~g~~Vt 198 (458)
T 1lvl_A 170 LPQHLVVVG-GGYIGLELGIAYRKLGAQVS 198 (458)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHHTCEEE
T ss_pred cCCeEEEEC-cCHHHHHHHHHHHHCCCeEE
Confidence 468999998 89999999998888888763
No 300
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=25.17 E-value=43 Score=31.29 Aligned_cols=26 Identities=15% Similarity=-0.056 Sum_probs=20.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 235 SILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+|+| +|.+|+.++.-+...|.+|.
T Consensus 34 DVvVIG-gGi~G~~~A~~La~rG~~V~ 59 (571)
T 2rgh_A 34 DLLIIG-GGITGAGVAVQAAASGIKTG 59 (571)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCcEE
Confidence 477888 99999987777777798763
No 301
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=24.88 E-value=36 Score=30.04 Aligned_cols=29 Identities=10% Similarity=-0.051 Sum_probs=24.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++++|+|.| +|.+|+-++..++..|.+|+
T Consensus 145 ~~~~vvVIG-gG~~g~E~A~~l~~~g~~Vt 173 (385)
T 3klj_A 145 NKGKAFIIG-GGILGIELAQAIIDSGTPAS 173 (385)
T ss_dssp HHSCEEEEC-CSHHHHHHHHHHHHHTCCEE
T ss_pred cCCeEEEEC-CCHHHHHHHHHHHhCCCeEE
Confidence 467899998 89999998888888888763
No 302
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=24.54 E-value=58 Score=29.11 Aligned_cols=29 Identities=17% Similarity=0.137 Sum_probs=24.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++|+|.| +|.+|+-++..++.+|.+|+
T Consensus 169 ~~~~vvViG-gG~~g~e~A~~l~~~g~~Vt 197 (455)
T 1ebd_A 169 VPKSLVVIG-GGYIGIELGTAYANFGTKVT 197 (455)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCcEE
Confidence 468899998 89999999988888898763
No 303
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=24.54 E-value=75 Score=26.57 Aligned_cols=35 Identities=9% Similarity=0.016 Sum_probs=26.3
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+....+++|++||=+| ||. |..++.+++. |++|+
T Consensus 37 il~~l~l~~g~~VLDlG-cGt-G~~a~~La~~-g~~V~ 71 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIG-AST-RFLIEKALER-GASVT 71 (261)
T ss_dssp HHHTTTCCTTCEEEEEC-TTC-HHHHHHHHHT-TCEEE
T ss_pred HHHhcCCCCcCEEEEEe-Ccc-hHHHHHHHhc-CCEEE
Confidence 34567889999999998 654 8888888875 66664
No 304
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=24.10 E-value=1.2e+02 Score=25.98 Aligned_cols=34 Identities=18% Similarity=0.086 Sum_probs=27.2
Q ss_pred HHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 226 ERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
+...++++++|+... +|..|++++..|+.+|.++
T Consensus 66 ~~g~l~~~~~vv~aS-sGN~g~alA~aa~~~G~~~ 99 (325)
T 3dwg_A 66 ADGLLRPGATILEPT-SGNTGISLAMAARLKGYRL 99 (325)
T ss_dssp HTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEE
T ss_pred HcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcE
Confidence 344577888876654 9999999999999999865
No 305
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=24.02 E-value=62 Score=29.27 Aligned_cols=28 Identities=21% Similarity=0.267 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
..|++|+|+| .|.+|.-++..++..|++
T Consensus 262 ~~gk~VvVIG-gG~~a~d~A~~~~r~Ga~ 289 (456)
T 2vdc_G 262 AAGKHVVVLG-GGDTAMDCVRTAIRQGAT 289 (456)
T ss_dssp CCCSEEEEEC-SSHHHHHHHHHHHHTTCS
T ss_pred cCCCEEEEEC-CChhHHHHHHHHHHcCCC
Confidence 5789999998 899999888888888874
No 306
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=23.96 E-value=51 Score=32.29 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=23.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
+..|+|+| +|..|+.++..+...|.+|.
T Consensus 336 ~~~v~viG-~G~~Gl~aA~~l~~~g~~v~ 363 (776)
T 4gut_A 336 NKSVIIIG-AGPAGLAAARQLHNFGIKVT 363 (776)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHHTCEEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCcEE
Confidence 35799999 89999998888888888763
No 307
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=23.94 E-value=55 Score=30.52 Aligned_cols=28 Identities=14% Similarity=0.064 Sum_probs=23.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
..-.|+|+| +|.-|+.++..++.+|.+|
T Consensus 106 ~~~dvvVIG-~GpAGl~aA~~l~~~g~~v 133 (598)
T 2x8g_A 106 YDYDLIVIG-GGSGGLAAGKEAAKYGAKT 133 (598)
T ss_dssp SSEEEEEEC-CSHHHHHHHHHHHHTTCCE
T ss_pred ccccEEEEC-CCccHHHHHHHHHhCCCeE
Confidence 345689999 9999999888888888876
No 308
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=23.94 E-value=45 Score=31.63 Aligned_cols=26 Identities=12% Similarity=0.037 Sum_probs=22.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 235 SILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.|+|+| +|..|+.++..+...|.+|.
T Consensus 48 dvvIIG-~G~aGl~aA~~l~~~G~~V~ 73 (623)
T 3pl8_A 48 DVVIVG-SGPIGCTYARELVGAGYKVA 73 (623)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEC-CcHHHHHHHHHHHhCCCcEE
Confidence 588888 89999998888888898763
No 309
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=23.93 E-value=47 Score=28.92 Aligned_cols=25 Identities=12% Similarity=0.074 Sum_probs=18.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHc--CCcc
Q 024775 235 SILVLNGSGGVGSLVIQVCYYY--LEFF 260 (262)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlAk~~--Ga~V 260 (262)
.|+|.| +|..|+.++..+... |.+|
T Consensus 67 dv~IiG-~G~aGl~aA~~la~~~~g~~V 93 (326)
T 2gjc_A 67 DVIIVG-AGSSGLSAAYVIAKNRPDLKV 93 (326)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHHCTTSCE
T ss_pred CEEEEC-ccHHHHHHHHHHHhcCCCCeE
Confidence 578888 899998876666655 7765
No 310
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=23.87 E-value=28 Score=28.49 Aligned_cols=28 Identities=11% Similarity=0.039 Sum_probs=23.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHc-CCcc
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYY-LEFF 260 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~-Ga~V 260 (262)
.++++||.+| +|. |..+..+++.. |++|
T Consensus 84 ~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v 112 (269)
T 1p91_A 84 DKATAVLDIG-CGE-GYYTHAFADALPEITT 112 (269)
T ss_dssp TTCCEEEEET-CTT-STTHHHHHHTCTTSEE
T ss_pred CCCCEEEEEC-CCC-CHHHHHHHHhCCCCeE
Confidence 6889999998 888 99999999876 5555
No 311
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=23.85 E-value=57 Score=32.39 Aligned_cols=28 Identities=11% Similarity=0.074 Sum_probs=24.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.+..|+|+| +|..|+.++..+...|.+|
T Consensus 277 ~~~~v~viG-~G~aGl~~A~~l~~~g~~v 304 (852)
T 2xag_A 277 KTGKVIIIG-SGVSGLAAARQLQSFGMDV 304 (852)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCcE
Confidence 467899999 9999999999888888766
No 312
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=23.83 E-value=63 Score=29.19 Aligned_cols=29 Identities=7% Similarity=0.079 Sum_probs=24.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++|+|.| +|.+|+-++..++.+|.+|+
T Consensus 185 ~~~~vvViG-gG~~g~e~A~~l~~~g~~Vt 213 (480)
T 3cgb_A 185 KVEDVTIIG-GGAIGLEMAETFVELGKKVR 213 (480)
T ss_dssp CCCEEEEEC-CHHHHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHhcCCeEE
Confidence 678899998 89999999998888888763
No 313
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=23.78 E-value=41 Score=31.39 Aligned_cols=28 Identities=14% Similarity=0.162 Sum_probs=22.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
...|+|+| +|..|+.++..+...|.+|.
T Consensus 126 ~~~v~viG-~G~aG~~aa~~~~~~g~~v~ 153 (572)
T 1d4d_A 126 TTDVVIIG-SGGAGLAAAVSARDAGAKVI 153 (572)
T ss_dssp ECSEEEEC-CSHHHHHHHHHHHSSSCCEE
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHCCCcEE
Confidence 34688888 99999998888888888763
No 314
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=23.63 E-value=99 Score=28.02 Aligned_cols=35 Identities=26% Similarity=0.161 Sum_probs=28.1
Q ss_pred HHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 226 ERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
++..+++|...+|...+|..|++++..|+.+|.++
T Consensus 167 ~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~ 201 (430)
T 4aec_A 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRL 201 (430)
T ss_dssp HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEE
T ss_pred HcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEE
Confidence 44557888666666679999999999999999865
No 315
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=23.51 E-value=42 Score=29.24 Aligned_cols=29 Identities=7% Similarity=-0.079 Sum_probs=24.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
++++++|.| +|.+|+-++..++.+|.+|+
T Consensus 142 ~~~~vvViG-gG~~g~E~A~~l~~~g~~Vt 170 (367)
T 1xhc_A 142 NSGEAIIIG-GGFIGLELAGNLAEAGYHVK 170 (367)
T ss_dssp HHSEEEEEE-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHhCCCEEE
Confidence 467899998 89999999999999898763
No 316
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=23.50 E-value=63 Score=24.19 Aligned_cols=29 Identities=14% Similarity=0.023 Sum_probs=23.1
Q ss_pred CCEEEEEcCc---hHHHHHHHHHHHHcCCccC
Q 024775 233 GKSILVLNGS---GGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 233 g~~VlI~Ga~---G~vG~~aiqlAk~~Ga~V~ 261 (262)
-.+|.|.|++ |.+|...++..+..|.+||
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~ 53 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVY 53 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEE
Confidence 3689999965 7889998888888887654
No 317
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=23.44 E-value=61 Score=28.86 Aligned_cols=30 Identities=7% Similarity=0.037 Sum_probs=25.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..+++++|.| +|.+|+-.+..++.+|.+|+
T Consensus 146 ~~~~~vvViG-gG~~g~E~A~~l~~~g~~Vt 175 (449)
T 3kd9_A 146 YKVENVVIIG-GGYIGIEMAEAFAAQGKNVT 175 (449)
T ss_dssp SCCCEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHHhCCCeEE
Confidence 3678999998 89999999888888888763
No 318
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=23.08 E-value=44 Score=26.47 Aligned_cols=33 Identities=24% Similarity=0.245 Sum_probs=24.9
Q ss_pred HcCCCCCCEEEEEcCchHHHHHHHHHHHHcC--CccC
Q 024775 227 RTGFSAGKSILVLNGSGGVGSLVIQVCYYYL--EFFF 261 (262)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G--a~V~ 261 (262)
...++++++||-.| +|. |..+..+++..| .+|+
T Consensus 68 ~~~~~~~~~vLDlG-~G~-G~~~~~la~~~~~~~~v~ 102 (227)
T 1g8a_A 68 NFPIKPGKSVLYLG-IAS-GTTASHVSDIVGWEGKIF 102 (227)
T ss_dssp CCCCCTTCEEEEET-TTS-TTHHHHHHHHHCTTSEEE
T ss_pred hcCCCCCCEEEEEe-ccC-CHHHHHHHHHhCCCeEEE
Confidence 34578999999998 666 888888888864 4543
No 319
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=23.06 E-value=1.4e+02 Score=27.30 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=27.7
Q ss_pred HHHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCc
Q 024775 224 GLERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEF 259 (262)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~ 259 (262)
.+..+.+++|++||=+| ||. |..++++|+..|+.
T Consensus 165 il~~l~l~~gd~VLDLG-CGt-G~l~l~lA~~~g~~ 198 (438)
T 3uwp_A 165 MIDEIKMTDDDLFVDLG-SGV-GQVVLQVAAATNCK 198 (438)
T ss_dssp HHHHHCCCTTCEEEEES-CTT-SHHHHHHHHHCCCS
T ss_pred HHHhcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCC
Confidence 34668999999998887 654 89999999888875
No 320
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=23.03 E-value=76 Score=27.08 Aligned_cols=35 Identities=17% Similarity=0.094 Sum_probs=27.1
Q ss_pred HHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 226 ERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
++..+++|+..+|...+|..|++++..|+.+|.++
T Consensus 59 ~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~ 93 (322)
T 1z7w_A 59 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKL 93 (322)
T ss_dssp HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEE
T ss_pred HcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCE
Confidence 34456778655555669999999999999999865
No 321
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=22.88 E-value=58 Score=26.91 Aligned_cols=30 Identities=17% Similarity=0.080 Sum_probs=24.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 230 FSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
...+++|+|.| +|.+|.-.+..+...|.+|
T Consensus 140 ~~~~~~v~VvG-~G~~g~e~A~~l~~~g~~V 169 (311)
T 2q0l_A 140 FYKNKEVAVLG-GGDTAVEEAIYLANICKKV 169 (311)
T ss_dssp GGTTSEEEEEC-CSHHHHHHHHHHHTTSSEE
T ss_pred hcCCCEEEEEC-CCHHHHHHHHHHHhcCCEE
Confidence 34679999998 8999988877777778765
No 322
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=22.78 E-value=60 Score=29.18 Aligned_cols=29 Identities=14% Similarity=0.032 Sum_probs=24.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++|+|.| +|.+|+-++..++.+|.+|+
T Consensus 182 ~~~~vvViG-gG~~g~e~A~~l~~~g~~Vt 210 (478)
T 1v59_A 182 IPKRLTIIG-GGIIGLEMGSVYSRLGSKVT 210 (478)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCceEEEEC-CCHHHHHHHHHHHHcCCEEE
Confidence 468999998 99999999999998898763
No 323
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=22.19 E-value=56 Score=28.36 Aligned_cols=19 Identities=11% Similarity=-0.092 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHHcCCccC
Q 024775 243 GGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 243 G~vG~~aiqlAk~~Ga~V~ 261 (262)
|-+|.+.++.+..+|+.|.
T Consensus 65 GkmG~aiAe~~~~~Ga~V~ 83 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYGVL 83 (313)
T ss_dssp CHHHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHCCCEEE
Confidence 6699999999999999874
No 324
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=22.06 E-value=63 Score=29.04 Aligned_cols=29 Identities=28% Similarity=0.175 Sum_probs=24.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++|+|.| +|.+|+-++..++.+|.+|+
T Consensus 168 ~~~~vvViG-gG~~g~e~A~~l~~~g~~Vt 196 (464)
T 2eq6_A 168 LPKRLLVIG-GGAVGLELGQVYRRLGAEVT 196 (464)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHHCCCeEE
Confidence 357899998 89999999998888888763
No 325
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=21.67 E-value=71 Score=28.73 Aligned_cols=29 Identities=10% Similarity=0.114 Sum_probs=24.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++|+|.| +|.+|+-++..++.+|.+|+
T Consensus 165 ~~~~vvVvG-gG~~g~e~A~~l~~~G~~Vt 193 (463)
T 2r9z_A 165 QPKRVAIIG-AGYIGIELAGLLRSFGSEVT 193 (463)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHhcCCEEE
Confidence 467899998 89999999999988898763
No 326
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=21.66 E-value=67 Score=29.82 Aligned_cols=28 Identities=14% Similarity=0.089 Sum_probs=21.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHc--CCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYY--LEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~--Ga~V 260 (262)
....|+|.| +|..|+.++.-++.. |.+|
T Consensus 35 ~~~~VvIIG-gG~AGl~aA~~L~~~~~g~~V 64 (588)
T 3ics_A 35 GSRKIVVVG-GVAGGASVAARLRRLSEEDEI 64 (588)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHCSSSEE
T ss_pred cCCCEEEEC-CcHHHHHHHHHHHhhCcCCCE
Confidence 346799999 999999887777766 5554
No 327
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=21.54 E-value=55 Score=29.56 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=23.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++|+|.| +|.+|.-.+..+...|.+|+
T Consensus 196 ~~k~VvVVG-~G~sg~eiA~~l~~~g~~V~ 224 (464)
T 2xve_A 196 KDKTVLLVG-SSYSAEDIGSQCYKYGAKKL 224 (464)
T ss_dssp TTSEEEEEC-CSTTHHHHHHHHHHTTCSEE
T ss_pred CCCEEEEEc-CCCCHHHHHHHHHHhCCeEE
Confidence 578999999 88889887777777787763
No 328
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=21.45 E-value=61 Score=25.80 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=25.3
Q ss_pred HcCCCCCCEEEEEcCchHHHHHHHHHHHHcC--CccC
Q 024775 227 RTGFSAGKSILVLNGSGGVGSLVIQVCYYYL--EFFF 261 (262)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G--a~V~ 261 (262)
...++++++||=.| +|. |..+..+++..| .+|+
T Consensus 72 ~~~~~~~~~vLDlG-~G~-G~~~~~la~~~g~~~~v~ 106 (233)
T 2ipx_A 72 QIHIKPGAKVLYLG-AAS-GTTVSHVSDIVGPDGLVY 106 (233)
T ss_dssp CCCCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEE
T ss_pred eecCCCCCEEEEEc-ccC-CHHHHHHHHHhCCCcEEE
Confidence 45688999999998 766 888888888864 4553
No 329
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=21.36 E-value=72 Score=23.95 Aligned_cols=33 Identities=21% Similarity=0.200 Sum_probs=23.9
Q ss_pred HHHcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 225 LERTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
++....+++++||-.| +|. |..+..+++. +.+|
T Consensus 45 ~~~~~~~~~~~vLdiG-~G~-G~~~~~~~~~-~~~v 77 (194)
T 1dus_A 45 VENVVVDKDDDILDLG-CGY-GVIGIALADE-VKST 77 (194)
T ss_dssp HHHCCCCTTCEEEEET-CTT-SHHHHHHGGG-SSEE
T ss_pred HHHcccCCCCeEEEeC-CCC-CHHHHHHHHc-CCeE
Confidence 4556778999999998 653 7777777776 5554
No 330
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=21.11 E-value=1.2e+02 Score=25.64 Aligned_cols=33 Identities=21% Similarity=0.135 Sum_probs=25.7
Q ss_pred HcCCCCCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 227 RTGFSAGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
+..+++|++|+..+ +|..|++++..|+.+|.++
T Consensus 56 ~g~~~~~~~vv~~s-sGN~g~a~A~~a~~~G~~~ 88 (316)
T 1y7l_A 56 DGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKI 88 (316)
T ss_dssp TTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCE
T ss_pred cCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcE
Confidence 34456777666654 8999999999999999865
No 331
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=21.10 E-value=68 Score=28.61 Aligned_cols=28 Identities=18% Similarity=0.088 Sum_probs=24.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
.+++|+|.| +|.+|+-++..++.+|.+|
T Consensus 166 ~~~~vvIiG-gG~~g~e~A~~l~~~g~~V 193 (455)
T 2yqu_A 166 VPKRLIVVG-GGVIGLELGVVWHRLGAEV 193 (455)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCEE
Confidence 458899998 8999999888888888876
No 332
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=21.05 E-value=64 Score=25.88 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=25.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 229 GFSAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.++++++||-+| +|. |..+..+++..+++|+
T Consensus 43 ~~~~~~~vLDiG-~G~-G~~~~~l~~~~~~~v~ 73 (257)
T 3f4k_A 43 ELTDDAKIADIG-CGT-GGQTLFLADYVKGQIT 73 (257)
T ss_dssp CCCTTCEEEEET-CTT-SHHHHHHHHHCCSEEE
T ss_pred cCCCCCeEEEeC-CCC-CHHHHHHHHhCCCeEE
Confidence 678999999998 765 8889999988776553
No 333
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=20.86 E-value=69 Score=27.40 Aligned_cols=25 Identities=12% Similarity=0.038 Sum_probs=21.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHcCC
Q 024775 233 GKSILVLNGSGGVGSLVIQVCYYYLE 258 (262)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlAk~~Ga 258 (262)
..+|.|+| .|.+|...++.++..|.
T Consensus 33 ~~kI~IIG-~G~mG~slA~~l~~~G~ 57 (314)
T 3ggo_A 33 MQNVLIVG-VGFMGGSFAKSLRRSGF 57 (314)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHTTC
T ss_pred CCEEEEEe-eCHHHHHHHHHHHhCCC
Confidence 36799999 99999998888888887
No 334
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=20.84 E-value=76 Score=28.37 Aligned_cols=29 Identities=14% Similarity=-0.015 Sum_probs=24.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 232 AGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
.+++|+|.| +|.+|+-.+..++.+|.+|+
T Consensus 166 ~~~~vvViG-gG~~g~e~A~~l~~~g~~Vt 194 (450)
T 1ges_A 166 LPERVAVVG-AGYIGVELGGVINGLGAKTH 194 (450)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred cCCeEEEEC-CCHHHHHHHHHHHhcCCEEE
Confidence 467899998 89999998888888888763
No 335
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=20.48 E-value=60 Score=30.26 Aligned_cols=24 Identities=13% Similarity=-0.025 Sum_probs=0.0
Q ss_pred EEEEcCchHHHHHHHHHHHHcCCcc
Q 024775 236 ILVLNGSGGVGSLVIQVCYYYLEFF 260 (262)
Q Consensus 236 VlI~Ga~G~vG~~aiqlAk~~Ga~V 260 (262)
|+|+| +|+-|+.++.-|..+|.+|
T Consensus 45 viVIG-~GpaG~~aA~~aa~~G~kV 68 (542)
T 4b1b_A 45 YVVIG-GGPGGMASAKEAAAHGARV 68 (542)
T ss_dssp EEEEC-CSHHHHHHHHHHHTTTCCE
T ss_pred EEEEC-CCHHHHHHHHHHHHCCCeE
No 336
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=20.33 E-value=71 Score=29.02 Aligned_cols=30 Identities=20% Similarity=0.066 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHcCCccC
Q 024775 231 SAGKSILVLNGSGGVGSLVIQVCYYYLEFFF 261 (262)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlAk~~Ga~V~ 261 (262)
..+++|+|.| +|.+|+-.++.++.+|.+|+
T Consensus 172 ~~~k~vvViG-gG~ig~E~A~~l~~~g~~Vt 201 (492)
T 3ic9_A 172 DLPKSVAVFG-PGVIGLELGQALSRLGVIVK 201 (492)
T ss_dssp SCCSEEEEES-SCHHHHHHHHHHHHTTCEEE
T ss_pred hcCCeEEEEC-CCHHHHHHHHHHHHcCCeEE
Confidence 3478999998 89999999999999998763
Done!