Query 024777
Match_columns 262
No_of_seqs 132 out of 244
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 14:14:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024777.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024777hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jvra_ a.61.1.2 (A:) HTLV-II 61.0 2.8 0.00021 32.4 3.2 33 63-95 39-75 (137)
2 d1yvoa1 d.108.1.1 (A:4-172) Hy 37.0 14 0.001 26.8 3.7 61 61-123 3-72 (169)
3 d1yr0a1 d.108.1.1 (A:4-166) Ph 33.5 32 0.0023 24.4 5.2 60 61-123 5-73 (163)
4 d1s3za_ d.108.1.1 (A:) Aminogl 30.8 25 0.0018 24.4 4.1 57 59-119 4-62 (147)
5 d2ozga2 d.108.1.10 (A:8-290) P 28.8 77 0.0056 24.9 7.4 79 58-142 2-100 (283)
6 d1vhsa_ d.108.1.1 (A:) Putativ 22.4 1.2E+02 0.0087 21.2 9.7 63 59-122 3-72 (165)
7 d1mk4a_ d.108.1.1 (A:) Hypothe 21.2 47 0.0035 23.6 4.1 22 61-82 5-26 (157)
8 d1iyka2 d.108.1.2 (A:225-451) 20.9 1.1E+02 0.0077 25.0 6.7 61 60-122 43-113 (227)
9 d2fe7a1 d.108.1.1 (A:3-158) Pr 20.3 1.3E+02 0.0097 20.9 7.8 58 61-120 4-67 (156)
10 d1i12a_ d.108.1.1 (A:) Glucosa 20.1 1.3E+02 0.0092 20.5 7.0 28 58-85 5-32 (157)
No 1
>d1jvra_ a.61.1.2 (A:) HTLV-II matrix protein {Human T-cell leukemia virus type 2 [TaxId: 11909]}
Probab=61.02 E-value=2.8 Score=32.45 Aligned_cols=33 Identities=27% Similarity=0.344 Sum_probs=26.0
Q ss_pred CCCCcHHHHHHHHHHhhcc----CCCChhhHHHHHHc
Q 024777 63 PKPDDFHGVKILLQTYLDD----TQWDLSGFVDLILA 95 (262)
Q Consensus 63 p~e~DfhgIK~LL~qlf~~----~~idlseLaDlIi~ 95 (262)
|++-|||-+|++|+-.+.. +.||.|-||.+|=.
T Consensus 39 PS~~DF~qLr~flklalkTpvwl~Pi~ySlla~liPk 75 (137)
T d1jvra_ 39 PSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASLIPK 75 (137)
T ss_dssp CSTTTHHHHHHHHHHHHTCTTSTTTTCTTTHHHHSCS
T ss_pred CCcccHHHHHHHHHHHHhCcccccccccchhhccCCC
Confidence 5667999999999877653 68999988887543
No 2
>d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=37.03 E-value=14 Score=26.78 Aligned_cols=61 Identities=13% Similarity=0.156 Sum_probs=38.3
Q ss_pred cCCCCCcHHHHHHHHHHhh-------ccCCCChhhHHHHHHcCCCcc--eEEEecCCCCCCceEEEEeeeCc
Q 024777 61 FDPKPDDFHGVKILLQTYL-------DDTQWDLSGFVDLILAQTTVG--TVVKMEGDDDDTPFSIVTALNLG 123 (262)
Q Consensus 61 fdp~e~DfhgIK~LL~qlf-------~~~~idlseLaDlIi~Q~~vG--SVIK~~ddedddvfg~~SvLNL~ 123 (262)
+...+.|..+|..+++++. +..+.+..+....+..+..-+ -+|-.+ .++.+.|++++-...
T Consensus 3 R~a~~~D~~~i~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~vG~~~~~~~~ 72 (169)
T d1yvoa1 3 RDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASD--AAGEVLGYASYGDWR 72 (169)
T ss_dssp EECCGGGHHHHHHHHHHHHHHCSSSSCCSCCCHHHHHHHHHHHHHHTCCEEEEEC--TTCCEEEEEEEEESS
T ss_pred ccCcHHHHHHHHHHHHHHHhhcceecccCCCCHHHHHHHHHhhhccCCceEEEEe--cCCCEEEeecccccc
Confidence 3456789999999987753 334567777777665553322 233332 335688988775443
No 3
>d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]}
Probab=33.52 E-value=32 Score=24.39 Aligned_cols=60 Identities=20% Similarity=0.242 Sum_probs=37.6
Q ss_pred cCCCCCcHHHHHHHHHHhh-------ccCCCChhhHHHHHHcCCCcc--eEEEecCCCCCCceEEEEeeeCc
Q 024777 61 FDPKPDDFHGVKILLQTYL-------DDTQWDLSGFVDLILAQTTVG--TVVKMEGDDDDTPFSIVTALNLG 123 (262)
Q Consensus 61 fdp~e~DfhgIK~LL~qlf-------~~~~idlseLaDlIi~Q~~vG--SVIK~~ddedddvfg~~SvLNL~ 123 (262)
+...++|..+|..+..++. +....+..+..+.+.....-+ .+|-.. ++.+.|++++....
T Consensus 5 R~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~---~~~ivG~~~~~~~~ 73 (163)
T d1yr0a1 5 RDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAIL---DGKVAGYASYGDWR 73 (163)
T ss_dssp EECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEE---TTEEEEEEEEEESS
T ss_pred EeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhhccCCCcEEEEEE---CCeEEEeecceeec
Confidence 4567789999999987753 234567777766665543222 233222 34689988776654
No 4
>d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]}
Probab=30.77 E-value=25 Score=24.44 Aligned_cols=57 Identities=9% Similarity=0.078 Sum_probs=36.7
Q ss_pred eecCCCCCcHHHHHHHHHHhhccCC--CChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEe
Q 024777 59 VFFDPKPDDFHGVKILLQTYLDDTQ--WDLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTA 119 (262)
Q Consensus 59 effdp~e~DfhgIK~LL~qlf~~~~--idlseLaDlIi~Q~~vGSVIK~~ddedddvfg~~Sv 119 (262)
+....++.|..++..|.++++.... .....+.+.+... ....+|..++ +.+.|++++
T Consensus 4 ~Ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~va~~~---~~~vG~~~~ 62 (147)
T d1s3za_ 4 DIRQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQAD-HLASFIAMAD---GVAIGFADA 62 (147)
T ss_dssp EEEECCGGGHHHHHHHHHHHSTTSCHHHHHHHHHHHHHCS-SEEEEEEEET---TEEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHhhCC-CcEEEEEEEC---CEEEEEEEE
Confidence 4466788899999999999987632 3345566655554 4334444432 357777765
No 5
>d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]}
Probab=28.81 E-value=77 Score=24.92 Aligned_cols=79 Identities=14% Similarity=0.131 Sum_probs=48.7
Q ss_pred EeecCCCCCcHHHHHHHHHHhhccCCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeeC---------------
Q 024777 58 FVFFDPKPDDFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALNL--------------- 122 (262)
Q Consensus 58 Feffdp~e~DfhgIK~LL~qlf~~~~idlseLaDlIi~Q~~vGSVIK~~ddedddvfg~~SvLNL--------------- 122 (262)
|.+...+++|+..|+.|+++.|.....+....-+-+-.++. -|+..+ +.+.|.++++..
T Consensus 2 ~~~~ka~~~d~~~l~~l~~~~F~~~~~~~~~~~~~~~~~~~--~v~~~~----~~ivg~~~~~~~~~~~~g~~~~~~~i~ 75 (283)
T d2ozga2 2 FKYTKASQENIQQLGNILEQCFVMSFGDSEIYVKGIGLENF--RVIYRE----QKVAGGLAILPMGQWWGGQRVPMAGIA 75 (283)
T ss_dssp EEEEECCTTTHHHHHHHHHHHTTCCTTHHHHHHHHHCGGGE--EEEEET----TEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHcCCCcCcHHHHHHHhcCCCE--EEEEEC----CEEEEEEEEEEeeeeECCeeeeEeeEE
Confidence 67778899999999999999997755544444443333332 233332 335555555433
Q ss_pred -----ccccCchhHHHHHHHHHHhc
Q 024777 123 -----GRYKDHKCIKELKEFLLKVC 142 (262)
Q Consensus 123 -----~~~k~~~~i~~L~~yLl~~~ 142 (262)
.+|+.......|.+.+++.+
T Consensus 76 ~v~v~p~~rg~G~~~~L~~~~~~~~ 100 (283)
T d2ozga2 76 AVGIAPEYRGDGAAIALIQHTLQEI 100 (283)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHH
T ss_pred EEEECcccccCChHHHHHHHHHHHH
Confidence 34556566777777777543
No 6
>d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]}
Probab=22.41 E-value=1.2e+02 Score=21.18 Aligned_cols=63 Identities=6% Similarity=0.057 Sum_probs=42.4
Q ss_pred eecCCCCCcHHHHHHHHHHhhc-------cCCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeeC
Q 024777 59 VFFDPKPDDFHGVKILLQTYLD-------DTQWDLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALNL 122 (262)
Q Consensus 59 effdp~e~DfhgIK~LL~qlf~-------~~~idlseLaDlIi~Q~~vGSVIK~~ddedddvfg~~SvLNL 122 (262)
..+...++|...|..+..++.. ..+.+..+..+.+.....-+...-... +++.+.|++++-+.
T Consensus 3 ~iR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~ivG~~~~~~~ 72 (165)
T d1vhsa_ 3 TLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAED-ENGNVAAWISFETF 72 (165)
T ss_dssp EEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEEC-TTSCEEEEEEEEES
T ss_pred EEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhccccCCeEEEEe-cCCceEeeeeeeec
Confidence 3456678899999999877543 245667778888777665554544433 34568888876543
No 7
>d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]}
Probab=21.15 E-value=47 Score=23.56 Aligned_cols=22 Identities=14% Similarity=0.205 Sum_probs=18.1
Q ss_pred cCCCCCcHHHHHHHHHHhhccC
Q 024777 61 FDPKPDDFHGVKILLQTYLDDT 82 (262)
Q Consensus 61 fdp~e~DfhgIK~LL~qlf~~~ 82 (262)
+...++|++.|..|+++++...
T Consensus 5 R~~~~~D~~~i~~l~~~~~~~~ 26 (157)
T d1mk4a_ 5 RTITSSDYEMVTSVLNEWWGGR 26 (157)
T ss_dssp EECCGGGHHHHHHHTTTSSTTC
T ss_pred EeCCHHHHHHHHHHHHHHhcCC
Confidence 5567789999999999988653
No 8
>d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]}
Probab=20.89 E-value=1.1e+02 Score=25.00 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=43.3
Q ss_pred ecCCCCCcHHHHHHHHHHhhcc----CCCChhhHHHHHHcCC------CcceEEEecCCCCCCceEEEEeeeC
Q 024777 60 FFDPKPDDFHGVKILLQTYLDD----TQWDLSGFVDLILAQT------TVGTVVKMEGDDDDTPFSIVTALNL 122 (262)
Q Consensus 60 ffdp~e~DfhgIK~LL~qlf~~----~~idlseLaDlIi~Q~------~vGSVIK~~ddedddvfg~~SvLNL 122 (262)
++.+.+.|...+..||+.|+.. ..|+-.+++..++.+. -|-|-|..+ +++.+-.|+|.-+|
T Consensus 43 lR~M~~kDv~~V~~LL~~yl~~f~l~~~F~~eev~Hwflp~~~~~~~~Vi~sYVve~--~~g~ItDF~SFY~L 113 (227)
T d1iyka2 43 LRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVED--ENGIITDYFSYYLL 113 (227)
T ss_dssp EEECCGGGHHHHHHHHHHHHTTSSEEEECCHHHHHHHHHCSCSSSCCSSEEEEEEEC--TTSCEEEEEEEEEC
T ss_pred cccCchhhHHHHHHHHHHHHHcCcceEecCHHHHHHhhcCccccCCCCeEEEEEEEC--CCCcEeEEEEEeec
Confidence 5667888999999999999865 5789999999999874 344555433 23445555554443
No 9
>d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.30 E-value=1.3e+02 Score=20.92 Aligned_cols=58 Identities=12% Similarity=0.186 Sum_probs=37.8
Q ss_pred cCCCCCcHHHHHHHHHHhhc------cCCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEee
Q 024777 61 FDPKPDDFHGVKILLQTYLD------DTQWDLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTAL 120 (262)
Q Consensus 61 fdp~e~DfhgIK~LL~qlf~------~~~idlseLaDlIi~Q~~vGSVIK~~ddedddvfg~~SvL 120 (262)
+...++|...|-.|.+++.. ...++...+...+..+++-..++-...+ +.+.|++++.
T Consensus 4 R~a~~~D~~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~--~~ivG~~~~~ 67 (156)
T d2fe7a1 4 RPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSE--GRPIGYAVFF 67 (156)
T ss_dssp EECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEET--TEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHHHhccCCCceEEEEeeC--CEEEEEEeEe
Confidence 44677899999999987632 2345566777777777665555544432 3588876543
No 10
>d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.07 E-value=1.3e+02 Score=20.53 Aligned_cols=28 Identities=14% Similarity=0.071 Sum_probs=21.2
Q ss_pred EeecCCCCCcHHHHHHHHHHhhccCCCC
Q 024777 58 FVFFDPKPDDFHGVKILLQTYLDDTQWD 85 (262)
Q Consensus 58 Feffdp~e~DfhgIK~LL~qlf~~~~id 85 (262)
|..+-..+.|+..|..+++.+.....+.
T Consensus 5 ~~IR~~~~~D~~~i~~~~~~~~~~~~~~ 32 (157)
T d1i12a_ 5 FYIRRMEEGDLEQVTETLKVLTTVGTIT 32 (157)
T ss_dssp EEEEECCGGGHHHHHHHHTTTSCCCCCC
T ss_pred cEEEeCCHHHHHHHHHHHHHHhhccccC
Confidence 6677788899999999998765544443
Done!