Query 024780
Match_columns 262
No_of_seqs 154 out of 739
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 14:18:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024780.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024780hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m00_A Aristolochene synthase; 100.0 8.1E-81 2.8E-85 615.3 21.5 240 14-262 3-243 (550)
2 3g4d_A (+)-delta-cadinene synt 100.0 3.2E-80 1.1E-84 611.4 22.6 230 27-262 18-247 (554)
3 2ong_A 4S-limonene synthase; m 100.0 1.9E-79 6.4E-84 605.1 21.6 229 30-262 1-236 (543)
4 3n0f_A Isoprene synthase; terp 100.0 3.5E-79 1.2E-83 604.3 18.6 226 29-262 13-245 (555)
5 2j5c_A 1,8-cineole synthase; t 100.0 3.3E-79 1.1E-83 606.3 17.9 234 23-262 27-263 (569)
6 1n1b_A (+)-bornyl diphosphate 100.0 5E-79 1.7E-83 602.9 17.5 230 29-262 4-242 (549)
7 3p5p_A Taxadiene synthase; cla 100.0 2.1E-61 7.2E-66 491.9 16.3 183 78-262 243-450 (764)
8 3s9v_A Abietadiene synthase, c 100.0 4.2E-61 1.4E-65 490.9 17.8 183 78-262 267-479 (785)
9 3sdr_A Alpha-bisabolene syntha 100.0 3.6E-61 1.2E-65 493.0 16.6 183 78-262 295-507 (817)
10 3pya_A ENT-copalyl diphosphate 100.0 7.4E-60 2.5E-64 477.7 18.1 200 60-262 220-454 (727)
11 3sdr_A Alpha-bisabolene syntha 97.5 2.7E-05 9.4E-10 80.2 2.1 47 28-75 22-68 (817)
12 1pd3_A Nonstructural protein N 46.9 17 0.00058 25.1 3.1 32 62-94 17-48 (58)
13 3s9v_A Abietadiene synthase, c 42.2 12 0.0004 38.4 2.5 41 35-75 5-45 (785)
14 1c07_A Protein (epidermal grow 37.3 1.1E+02 0.0037 21.7 7.6 60 78-144 23-86 (95)
15 1fi6_A EH domain protein REPS1 26.1 1.7E+02 0.0058 20.4 7.5 70 69-144 10-84 (92)
16 1qjt_A EH1, epidermal growth f 24.3 2E+02 0.0068 20.6 7.1 65 79-147 25-89 (99)
No 1
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=8.1e-81 Score=615.27 Aligned_cols=240 Identities=45% Similarity=0.806 Sum_probs=213.4
Q ss_pred hhhhhhhhhccccCccCCCCCCCCCCCCcccccccCCCCccccchHHHHHHHHHHHHHHHHhhcCCChhhhhhhhHHHHH
Q 024780 14 KSAQVLATVSSSTEKTGRPIEGFHPSLWGDHFLTLASDCETNDTTHQEEYEALKQEVRSMITATADTPAQKLQLVDAVQR 93 (262)
Q Consensus 14 ~~~~~~~~~~~~~~~~~Rr~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~e~LkeeVr~ml~~~~~d~~~~L~lID~LqR 93 (262)
|+|++ +++..+++.||+||||||+|||+||++.+.. ..++.+.+++++||++||+||.+...+++++|+|||+|||
T Consensus 3 ~~~~~---~~~~~~~~~R~~~~~~ps~W~d~fl~~~~~~-~~~~~~~~~~e~Lk~eVr~~l~~~~~~~~~~L~lID~lqr 78 (550)
T 3m00_A 3 MASAA---VANYEEEIVRPVADFSPSLWGDQFLSFSIKN-QVAEKYAKEIEALKEQTRNMLLATGMKLADTLNLIDTIER 78 (550)
T ss_dssp ----------------CCCCCCCCCCTTTTTTSCCCCCH-HHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH
T ss_pred ccccc---ccccccccCCCCCCCCcccccccccccCCcc-hhhHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHH
Confidence 66666 2333556789999999999999999975432 2356788999999999999997435799999999999999
Q ss_pred hCcccccHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHHHhcCccccccccccccccccccccchhhcHHHHHHHHHh
Q 024780 94 LGVAYHFEQEIEDALEKIYHDDFDNNDDVDLYSVSLRFRLLRQQGFKVPCDVFEKFKDDEGKFKASLVKDVQGILSLYEA 173 (262)
Q Consensus 94 LGI~yhFe~EI~~~L~~iy~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~DvF~~Fkd~~G~F~~~l~~Dv~glLsLYeA 173 (262)
|||+|||++||+++|++||++|.. ..||++|||+|||||||||+||||||++|+|++|+|++++.+||+|||+||||
T Consensus 79 LGi~~hF~~EI~~~L~~i~~~~~~---~~dl~~~al~FRLLR~hGy~VS~dvf~~F~~~~G~F~~~l~~d~~glL~LYeA 155 (550)
T 3m00_A 79 LGISYHFEKEIDDILDQIYNQNSN---CNDLCTSALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYEA 155 (550)
T ss_dssp TTCGGGCHHHHHHHHHHHHHHCCC---CSSHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHH
T ss_pred cCchhhhHHHHHHHHHHHHHhccc---CCCHHHHHHHHHHHHhcCCCCChHHhhhccccCCCccccchhchHHHHHHHHH
Confidence 999999999999999999998832 47999999999999999999999999999999999999999999999999999
Q ss_pred hccCCcCchHHHHHHHHHHHHHHhhhcCCCCChhHHHHHHHhcCCCccCCcchhHHhhhhh-ccCCCCCCCHHHHHHHHH
Q 024780 174 GHLAIRGEDILDEAIAFTRTHLKSMVSDDVCPNNLAEQINHALDCPLRRALPRVETRFFLS-VYPRVDKHDKTLLKFAKL 252 (262)
Q Consensus 174 S~L~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~~~L~~~V~~aL~~P~h~~l~RleaR~yI~-~Y~~~~~~n~~LLelAkl 252 (262)
|||++|||+|||+|+.||++||++.++.++++ |+++|.|||++||||++||||||+||+ .|++++++|++|||||||
T Consensus 156 s~l~~~gE~iLdeA~~fs~~~L~~~~~~~~~~--l~~~V~~aL~~P~~~~l~rlear~yI~~~Y~~~~~~n~~lLelAkl 233 (550)
T 3m00_A 156 SHVRTHADDILEDALAFSTIHLESAAPHLKSP--LREQVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKL 233 (550)
T ss_dssp HTTCCTTCGGGTTHHHHHHHHHHHHGGGCCTT--HHHHHHHHHHSCSTTSCHHHHHHHHHHHTGGGCTTCCHHHHHHHHH
T ss_pred HhcCCCCcHHHHHHHHHHHHHHHHHHhccCcc--HHHHHHHHhCCCccCCchHHHHHHHHHHHhcccccccHHHHHHHHH
Confidence 99999999999999999999999988777778 999999999999999999999999999 999999999999999999
Q ss_pred hhHHHHhhcC
Q 024780 253 DFNLVQRIHQ 262 (262)
Q Consensus 253 DFn~~Qs~hq 262 (262)
|||+||++||
T Consensus 234 dFn~~Q~~hq 243 (550)
T 3m00_A 234 DFNLLQMLHK 243 (550)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhH
Confidence 9999999997
No 2
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=3.2e-80 Score=611.40 Aligned_cols=230 Identities=52% Similarity=0.908 Sum_probs=207.3
Q ss_pred CccCCCCCCCCCCCCcccccccCCCCccccchHHHHHHHHHHHHHHHHhhcCCChhhhhhhhHHHHHhCcccccHHHHHH
Q 024780 27 EKTGRPIEGFHPSLWGDHFLTLASDCETNDTTHQEEYEALKQEVRSMITATADTPAQKLQLVDAVQRLGVAYHFEQEIED 106 (262)
Q Consensus 27 ~~~~Rr~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~e~LkeeVr~ml~~~~~d~~~~L~lID~LqRLGI~yhFe~EI~~ 106 (262)
.++.||+||||||+|||+||++ +.. ...+.+.+++++||++||+||.+...|++++|+|||+||||||+|||++||++
T Consensus 18 ~~~~R~~~~~~ps~W~~~fl~~-~~~-~~~~~~~~~~e~Lk~eVr~~l~~~~~~~~~~l~lID~lqrLGi~~hF~~EI~~ 95 (554)
T 3g4d_A 18 KDEMRPKADFQPSIWGDLFLNC-PDK-NIDAETEKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIED 95 (554)
T ss_dssp -------CCCCCCTTTTTTTSC-CC----CHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHHTTCGGGCHHHHHH
T ss_pred CCCCCCCCCCCccccccccccC-CCc-hhhHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHcCchhhhHHHHHH
Confidence 4468999999999999999997 432 23567899999999999999974357999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCchhhHHHHHHHHHhcCccccccccccccccccccccchhhcHHHHHHHHHhhccCCcCchHHHH
Q 024780 107 ALEKIYHDDFDNNDDVDLYSVSLRFRLLRQQGFKVPCDVFEKFKDDEGKFKASLVKDVQGILSLYEAGHLAIRGEDILDE 186 (262)
Q Consensus 107 ~L~~iy~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~DvF~~Fkd~~G~F~~~l~~Dv~glLsLYeAS~L~~~gE~iLde 186 (262)
+|++||++ . .....|||+|||+|||||||||+||||||++|+|++|+|++++.+||+|||+|||||||++|||+|||+
T Consensus 96 ~L~~i~~~-~-~~~~~dl~~~al~FRlLR~hGy~VS~dvf~~F~~~~g~F~~~l~~d~~glL~LYeAs~l~~~gE~iLde 173 (554)
T 3g4d_A 96 ELENIYHN-N-NDAENDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDE 173 (554)
T ss_dssp HHHHHHHS-C-CCTTCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCHHHHHCHHHHHHHHHHHTTCCTTCHHHHH
T ss_pred HHHHHHhc-c-CCCCCCHHHHHHHHHHHHhcCCCCChhHHhhhcccCCCcccccccchHHHHHHHHHHhCCCCCcHHHHH
Confidence 99999975 1 222379999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCChhHHHHHHHhcCCCccCCcchhHHhhhhhccCCCCCCCHHHHHHHHHhhHHHHhhcC
Q 024780 187 AIAFTRTHLKSMVSDDVCPNNLAEQINHALDCPLRRALPRVETRFFLSVYPRVDKHDKTLLKFAKLDFNLVQRIHQ 262 (262)
Q Consensus 187 A~~Ft~~~L~~~~~~~~~~~~L~~~V~~aL~~P~h~~l~RleaR~yI~~Y~~~~~~n~~LLelAklDFn~~Qs~hq 262 (262)
|+.||+++|++.++.++++ |+++|.|||++||||++||||||+||+.|++++++|++||||||||||+||++||
T Consensus 174 A~~fs~~~L~~~~~~~~~~--l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq 247 (554)
T 3g4d_A 174 AISFTTHHLSLAVASLDHP--LSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKALLEFAKIDFNMLQFLHR 247 (554)
T ss_dssp HHHHHHHHHHHHSTTCCTT--HHHHHHHHHHCCTTTSCHHHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCch--HHHHHHHHhCCCccCCchHHHHHHHHHHhCcCccccHHHHHHHHHHHHHHHHHhH
Confidence 9999999999998877778 9999999999999999999999999999999999999999999999999999997
No 3
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=1.9e-79 Score=605.11 Aligned_cols=229 Identities=33% Similarity=0.554 Sum_probs=211.9
Q ss_pred CCCCCCCCCCCCcccccccCCCCccccchHHHHHHHHHHHHHHHHhhcCCChhhhhhhhHHHHHhCcccccHHHHHHHHH
Q 024780 30 GRPIEGFHPSLWGDHFLTLASDCETNDTTHQEEYEALKQEVRSMITATADTPAQKLQLVDAVQRLGVAYHFEQEIEDALE 109 (262)
Q Consensus 30 ~Rr~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~e~LkeeVr~ml~~~~~d~~~~L~lID~LqRLGI~yhFe~EI~~~L~ 109 (262)
.||+|||+||+|||+||++.+.. ...+.+.++++.||++||+|+.+ ..|++++|+|||+||||||+|||++||+++|+
T Consensus 1 ~r~~~~~~ps~W~~~fl~~~~~~-~~~~~~~~~~~~Lk~~V~~~~~~-~~d~~~~l~liD~lqrLGi~~hF~~EI~~~L~ 78 (543)
T 2ong_A 1 MRRSGNYNPSRWDVNFIQSLLSD-YKEDKHVIRASELVTLVKMELEK-ETDQIRQLELIDDLQRMGLSDHFQNEFKEILS 78 (543)
T ss_dssp CCCCCCCCCCSSCHHHHHHCCCS-SCSTHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHTTGGGTTHHHHHHHHH
T ss_pred CCCCCCCCCCcCCcccccCCCch-hhhhHHHHHHHHHHHHHHHHHhc-ccCHHHHHHHHHHHHhCCchhhhHHHHHHHHH
Confidence 38999999999999999864322 23457899999999999999987 45999999999999999999999999999999
Q ss_pred HHHhccCCC----CC-CCchhhHHHHHHHHHhcCccccccccccccccccccccchhhcHHHHHHHHHhhccCCcCchHH
Q 024780 110 KIYHDDFDN----ND-DVDLYSVSLRFRLLRQQGFKVPCDVFEKFKDDEGKFKASLVKDVQGILSLYEAGHLAIRGEDIL 184 (262)
Q Consensus 110 ~iy~~~~~~----~~-~~dL~~~AL~FRLLRqhGy~VS~DvF~~Fkd~~G~F~~~l~~Dv~glLsLYeAS~L~~~gE~iL 184 (262)
+||+.|.+. .. ..|||+|||+|||||||||+||||||++|||++|+|++++++||+|||+|||||||++|||+||
T Consensus 79 ~i~~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~vs~dvf~~Fk~~~g~F~~~l~~d~~glL~Ly~As~l~~~gE~iL 158 (543)
T 2ong_A 79 SIYLDHHYYKNPFPKEERDLYSTSLAFRLLREHGFQVAQEVFDSFKNEEGEFKESLSDDTRGLLQLYEASFLLTEGETTL 158 (543)
T ss_dssp HHHHTTTCCCSSCCCCCCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCTTGGGCHHHHHHHHHHHTTCCSSCHHH
T ss_pred HHHHhhcccccccccccCCHHHHHHHHHHHHHcCCCccHHHHhcccCCCCCccchhhhccHHHHHHHHHHHcCCCChHHH
Confidence 999987321 12 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcC-C-CCChhHHHHHHHhcCCCccCCcchhHHhhhhhccCCCCCCCHHHHHHHHHhhHHHHhhcC
Q 024780 185 DEAIAFTRTHLKSMVSD-D-VCPNNLAEQINHALDCPLRRALPRVETRFFLSVYPRVDKHDKTLLKFAKLDFNLVQRIHQ 262 (262)
Q Consensus 185 deA~~Ft~~~L~~~~~~-~-~~~~~L~~~V~~aL~~P~h~~l~RleaR~yI~~Y~~~~~~n~~LLelAklDFn~~Qs~hq 262 (262)
|||+.||++||++.+.. + +++ |+++|.+||++||||++||||||+||+.|++++++|++||||||||||+||++||
T Consensus 159 ~eA~~Ft~~~L~~~~~~~~~~~~--l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq 236 (543)
T 2ong_A 159 ESAREFATKFLEEKVNEGGVDGD--LLTRIAYSLDIPLHWRIKRPNAPVWIEWYRKRPDMNPVVLELAILDLNIVQAQFQ 236 (543)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSSH--HHHHHHHHHHSCTTTSCSTTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCc--HHHHHHHHHhhhHhccchHHHHHHHHHHhccCccccHHHHHHHHHhHHHHHHHHH
Confidence 99999999999999886 5 677 9999999999999999999999999999999999999999999999999999997
No 4
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=3.5e-79 Score=604.27 Aligned_cols=226 Identities=38% Similarity=0.614 Sum_probs=205.4
Q ss_pred cCCCCCCCCCCCCcccccccCCCCccccchHHHHHHHHHHHHHHHHhhcCC-ChhhhhhhhHHHHHhCcccccHHHHHHH
Q 024780 29 TGRPIEGFHPSLWGDHFLTLASDCETNDTTHQEEYEALKQEVRSMITATAD-TPAQKLQLVDAVQRLGVAYHFEQEIEDA 107 (262)
Q Consensus 29 ~~Rr~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~e~LkeeVr~ml~~~~~-d~~~~L~lID~LqRLGI~yhFe~EI~~~ 107 (262)
..|++|||+||+|||+||++.+.. ..++.+.+++++||++||+||.+ .. +++++|+|||+||||||+|||++||+++
T Consensus 13 ~~~~~~~~~ps~W~~~fl~~~~~~-~~~~~~~~~~e~Lk~eVr~~l~~-~~~~~~~~L~lID~lqRLGi~~hF~~EI~~~ 90 (555)
T 3n0f_A 13 EARRSADYEPNSWDYDFLLSSDTD-ESIEVYKDKAKKLEAEVRREINN-EKAEFLTLLELIDNVQRLGLGYRFESDIRRA 90 (555)
T ss_dssp ----CCCCCCCTTCHHHHTCC------CHHHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHHHHHHTTCGGGSHHHHHHH
T ss_pred ccCCCCCCCcccccccccccCCcc-hhhHHHHHHHHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHcCchhhhHHHHHHH
Confidence 379999999999999999975432 23567899999999999999975 55 8999999999999999999999999999
Q ss_pred HHHHHhc-----cCCCCCCCchhhHHHHHHHHHhcCccccccccccccccccccccchhhcHHHHHHHHHhhccCCcCch
Q 024780 108 LEKIYHD-----DFDNNDDVDLYSVSLRFRLLRQQGFKVPCDVFEKFKDDEGKFKASLVKDVQGILSLYEAGHLAIRGED 182 (262)
Q Consensus 108 L~~iy~~-----~~~~~~~~dL~~~AL~FRLLRqhGy~VS~DvF~~Fkd~~G~F~~~l~~Dv~glLsLYeAS~L~~~gE~ 182 (262)
|++||+. | ...||++|||+|||||||||+||||||++|+|++|+|++++.+||+|||+|||||||++|||+
T Consensus 91 L~~i~~~~~~~~~----~~~DL~~~Al~FRLLR~hGy~VS~dvF~~F~d~~G~F~~~l~~dv~glL~LYeAs~l~~~gE~ 166 (555)
T 3n0f_A 91 LDRFVSSGGFDGV----TKTSLHATALSFRLLRQHGFEVSQEAFSGFKDQNGNFLENLKEDTKAILSLYEASFLALEGEN 166 (555)
T ss_dssp HHHHHHTCHHHHH----TTTCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTCH
T ss_pred HHHHHhhcccccc----ccCCHHHHHHHHHHHHhcCCCcChHHHhcccccCccchhhhhhhhHHHHHHHHHHhcccCCcH
Confidence 9999973 4 247999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhc-CCCCChhHHHHHHHhcCCCccCCcchhHHhhhhhccCCCCCCCHHHHHHHHHhhHHHHhhc
Q 024780 183 ILDEAIAFTRTHLKSMVS-DDVCPNNLAEQINHALDCPLRRALPRVETRFFLSVYPRVDKHDKTLLKFAKLDFNLVQRIH 261 (262)
Q Consensus 183 iLdeA~~Ft~~~L~~~~~-~~~~~~~L~~~V~~aL~~P~h~~l~RleaR~yI~~Y~~~~~~n~~LLelAklDFn~~Qs~h 261 (262)
|||+|+.||+++|++.+. .++++ |+++|.+||++||||++||||||+||+.|++++++|++||||||||||+||++|
T Consensus 167 iLdeA~~Fs~~~L~~~~~~~~~~~--l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelAKlDFN~~Q~~h 244 (555)
T 3n0f_A 167 ILDEARVFAISHLKELSEEKIGKE--LAEQVNHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVY 244 (555)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHCHH--HHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCch--HHHHHHHHhcCCcccCchHHHHHHHHHHhcccccccHHHHHHHHHhHHHHHHHh
Confidence 999999999999999765 45666 999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 024780 262 Q 262 (262)
Q Consensus 262 q 262 (262)
|
T Consensus 245 q 245 (555)
T 3n0f_A 245 Q 245 (555)
T ss_dssp H
T ss_pred H
Confidence 7
No 5
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=3.3e-79 Score=606.34 Aligned_cols=234 Identities=35% Similarity=0.569 Sum_probs=187.4
Q ss_pred ccccCccCCCCCCCCCCCCcccccccCCCCccccchHHHHHHHHHHHHHHHHhhcCCChhhhhhhhHHHHHhCcccccHH
Q 024780 23 SSSTEKTGRPIEGFHPSLWGDHFLTLASDCETNDTTHQEEYEALKQEVRSMITATADTPAQKLQLVDAVQRLGVAYHFEQ 102 (262)
Q Consensus 23 ~~~~~~~~Rr~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~e~LkeeVr~ml~~~~~d~~~~L~lID~LqRLGI~yhFe~ 102 (262)
..+..+..||++||+||+|||+||++.+. ....+.+.++++.||++||+|+.+ ..|++++|+|||+||||||+|||++
T Consensus 27 ~~~~~~~~r~~~~~~ps~W~~~fl~~~~~-~~~~~~~~~~~~~Lk~~Vr~~~~~-~~d~~~~l~lID~lqrLGi~~hFe~ 104 (569)
T 2j5c_A 27 DDDDKDRWIRTGGYQPTLWDFSTIQSFDS-EYKEEKHLMRAAGMIDQVKMMLQE-EVDSIRRLELIDDLRRLGISCHFER 104 (569)
T ss_dssp ------------------------------------CHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHTCGGGGHH
T ss_pred CCCcccccCCCCCCCCCcCCcccccCCCc-hhhhHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHhCCchhhhHH
Confidence 33345568999999999999999986432 223456889999999999999987 4599999999999999999999999
Q ss_pred HHHHHHHHHH-hccCCCCCCCchhhHHHHHHHHHhcCcccccccccccccccc-ccccchhhcHHHHHHHHHhhccCCcC
Q 024780 103 EIEDALEKIY-HDDFDNNDDVDLYSVSLRFRLLRQQGFKVPCDVFEKFKDDEG-KFKASLVKDVQGILSLYEAGHLAIRG 180 (262)
Q Consensus 103 EI~~~L~~iy-~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~DvF~~Fkd~~G-~F~~~l~~Dv~glLsLYeAS~L~~~g 180 (262)
||+++|++|| +.+. ....||++|||+|||||||||+||||||++|||++| +|++++++||+|||+|||||||++||
T Consensus 105 EI~~~L~~i~~~~~~--~~~~Dl~~~al~FRlLR~hGy~Vs~dvF~~Fkd~~G~~F~~~l~~dv~glL~LY~As~l~~~g 182 (569)
T 2j5c_A 105 EIVEILNSKYYTNNE--IDERDLYSTALRFRLLRQYDFSVSQEVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLSAQG 182 (569)
T ss_dssp HHHHHHHHHTTSSCC--SCTTCHHHHHHHHHHHHHTTCCCCGGGGGGGBCSSSSSBCGGGGGCHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHHhccC--cccCChhhhhHHhHHHHhcCCCcCHHHHhcccCCCCCccccchhhccHHHHHHHHHHhcCCCC
Confidence 9999999999 7652 134699999999999999999999999999999999 99999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHhhhcCC-CCChhHHHHHHHhcCCCccCCcchhHHhhhhhccCCCCCCCHHHHHHHHHhhHHHHh
Q 024780 181 EDILDEAIAFTRTHLKSMVSDD-VCPNNLAEQINHALDCPLRRALPRVETRFFLSVYPRVDKHDKTLLKFAKLDFNLVQR 259 (262)
Q Consensus 181 E~iLdeA~~Ft~~~L~~~~~~~-~~~~~L~~~V~~aL~~P~h~~l~RleaR~yI~~Y~~~~~~n~~LLelAklDFn~~Qs 259 (262)
|+|||||+.||++||++.+.++ +++ |+++|.+||++||||++||||||+||+.|++++++|++||||||||||+||+
T Consensus 183 E~iLdeA~~Ft~~~L~~~~~~~~~~~--l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~ 260 (569)
T 2j5c_A 183 EETLRLARDFATKFLQKRVLVDKDIN--LLSSIERALELPTHWRVQMPNARSFIDAYKRRPDMNPTVLELAKLDFNMVQA 260 (569)
T ss_dssp CHHHHHHHHHHHHTTSSCC----CHH--HHHHHHHHHHSCGGGCCSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCc--HHHHHHHHhcCccccCcHHHHHHHHHHHhccCccccHHHHHHHHHhHHHHHH
Confidence 9999999999999999998766 666 9999999999999999999999999999999999999999999999999999
Q ss_pred hcC
Q 024780 260 IHQ 262 (262)
Q Consensus 260 ~hq 262 (262)
+||
T Consensus 261 ~hq 263 (569)
T 2j5c_A 261 QFQ 263 (569)
T ss_dssp HHH
T ss_pred HHH
Confidence 997
No 6
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=5e-79 Score=602.87 Aligned_cols=230 Identities=35% Similarity=0.635 Sum_probs=199.9
Q ss_pred cCCCCCCCCCCCCcccccccCCCCccccchHHHHHHHHHHHHHHHHhhcCCChhhhhhhhHHHHHhCcccccHHHHHHHH
Q 024780 29 TGRPIEGFHPSLWGDHFLTLASDCETNDTTHQEEYEALKQEVRSMITATADTPAQKLQLVDAVQRLGVAYHFEQEIEDAL 108 (262)
Q Consensus 29 ~~Rr~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~e~LkeeVr~ml~~~~~d~~~~L~lID~LqRLGI~yhFe~EI~~~L 108 (262)
+.||+|||+||+|||+|++ ++..+...+.+.++++.||++||+|+.+ ..|++++|+|||+||||||+|||++||+++|
T Consensus 4 ~~r~~~~~~ps~W~~~fl~-s~~~~~~~~~~~~~~~~Lk~~V~~~~~~-~~d~~~~l~lvD~lqrLGi~~hF~~EI~~~L 81 (549)
T 1n1b_A 4 QIRRSGNYQPALWDSNYIQ-SLNTPYTEERHLDRKAELIVQVRILLKE-KMEPVQQLELIHDLKYLGLSDFFQDEIKEIL 81 (549)
T ss_dssp -----------CCCHHHHH-HCCCSTTSHHHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHTTCGGGGHHHHHHHH
T ss_pred cCCCCCCCCCCCCCCCccc-CCCcchhhhHHHHHHHHHHHHHHHHHhc-ccCHHHHHHhHHHHHhCCchhhhHHHHHHHH
Confidence 4699999999999999994 4333333457899999999999999986 4599999999999999999999999999999
Q ss_pred HHHHhccCC--CC--CCCchhhHHHHHHHHHhcCcccccccccccccccc-ccccchhhcHHHHHHHHHhhccCCcCchH
Q 024780 109 EKIYHDDFD--NN--DDVDLYSVSLRFRLLRQQGFKVPCDVFEKFKDDEG-KFKASLVKDVQGILSLYEAGHLAIRGEDI 183 (262)
Q Consensus 109 ~~iy~~~~~--~~--~~~dL~~~AL~FRLLRqhGy~VS~DvF~~Fkd~~G-~F~~~l~~Dv~glLsLYeAS~L~~~gE~i 183 (262)
++||+.+.. .. ...|||+|||+|||||||||+||||||++|||++| +|++++++||+|||+|||||||++|||+|
T Consensus 82 ~~i~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~Vs~dvf~~Fk~~~g~~F~~~l~~d~~glL~LY~As~l~~~gE~i 161 (549)
T 1n1b_A 82 GVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDT 161 (549)
T ss_dssp HHHHHHCHHHHHCCCCSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSSBCGGGGGCHHHHHHHHHHHTTCCTTCHH
T ss_pred HHHHhhhccccccccccCChhhchhhhhHHHhcCCCcCHHHHhhccCCCCCccchhhhhccHHHHHHHHHHhcCCCChHH
Confidence 999987511 11 14699999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcC---C-CCChhHHHHHHHhcCCCccCCcchhHHhhhhhccCCCCCCCHHHHHHHHHhhHHHHh
Q 024780 184 LDEAIAFTRTHLKSMVSD---D-VCPNNLAEQINHALDCPLRRALPRVETRFFLSVYPRVDKHDKTLLKFAKLDFNLVQR 259 (262)
Q Consensus 184 LdeA~~Ft~~~L~~~~~~---~-~~~~~L~~~V~~aL~~P~h~~l~RleaR~yI~~Y~~~~~~n~~LLelAklDFn~~Qs 259 (262)
||||+.||++||++.+.+ + +++ |+++|++||++||||++||||||+||+.|++++++|++||||||||||+||+
T Consensus 162 L~eA~~Ft~~~L~~~~~~~~~~~~~~--l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~ 239 (549)
T 1n1b_A 162 LELAREFATKCLQKKLDEGGNEIDEN--LLLWIRHSLDLPLHWRIQSVEARWFIDAYARRPDMNPLIFELAKLNFNIIQA 239 (549)
T ss_dssp HHHHHHHHHHHHHHHTC------CHH--HHHHHHHHHHSCGGGCCTTTSHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccCCCc--HHHHHHHHhcCchhcCchHHHHHHHHHHhcccccccHHHHHHHHHhHHHHHH
Confidence 999999999999999875 4 566 9999999999999999999999999999999999999999999999999999
Q ss_pred hcC
Q 024780 260 IHQ 262 (262)
Q Consensus 260 ~hq 262 (262)
+||
T Consensus 240 ~hq 242 (549)
T 1n1b_A 240 THQ 242 (549)
T ss_dssp HHH
T ss_pred HHH
Confidence 997
No 7
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=2.1e-61 Score=491.88 Aligned_cols=183 Identities=32% Similarity=0.555 Sum_probs=169.5
Q ss_pred CCChhhhhhhhHHHHHhCcccccHHHHHHHHHHHHhccCC----C--C-CCCchhhHHHHHHHHHhcCcccccccccccc
Q 024780 78 ADTPAQKLQLVDAVQRLGVAYHFEQEIEDALEKIYHDDFD----N--N-DDVDLYSVSLRFRLLRQQGFKVPCDVFEKFK 150 (262)
Q Consensus 78 ~~d~~~~L~lID~LqRLGI~yhFe~EI~~~L~~iy~~~~~----~--~-~~~dL~~~AL~FRLLRqhGy~VS~DvF~~Fk 150 (262)
|.|++++|+|||+||||||+|||++||+++|+.||++|.+ + . ...||++|||+|||||||||+||||||++|+
T Consensus 243 P~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~ 322 (764)
T 3p5p_A 243 SIDLLERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVLNNFK 322 (764)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGGHHHHHHHHHHHHHTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGB
T ss_pred CCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHhcCCCccHhHHHhhh
Confidence 5799999999999999999999999999999999998832 1 1 1369999999999999999999999999999
Q ss_pred ccccccccc---hhhcHHHHHHHHHhhccCCcCchHHHHHHHHHHHHHHhhhc---CCCCChhHHHHHHHhcCCCccCCc
Q 024780 151 DDEGKFKAS---LVKDVQGILSLYEAGHLAIRGEDILDEAIAFTRTHLKSMVS---DDVCPNNLAEQINHALDCPLRRAL 224 (262)
Q Consensus 151 d~~G~F~~~---l~~Dv~glLsLYeAS~L~~~gE~iLdeA~~Ft~~~L~~~~~---~~~~~~~L~~~V~~aL~~P~h~~l 224 (262)
|++|+|+++ +.+||+|||+|||||||++|||+|||||+.||++||++.+. .++++ |+++|+|||++|||+++
T Consensus 323 d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~--L~~eV~~aL~~P~~~~l 400 (764)
T 3p5p_A 323 DENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKISTNTK--LFKEIEYVVEYPWHMSI 400 (764)
T ss_dssp CTTSCBCSCTTCSCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHHTSCSSSH--HHHHHHHHHHSCGGGCC
T ss_pred cCCCCccccccccccccHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCcc--HHHHHHHHhcCchhccc
Confidence 999999974 68999999999999999999999999999999999999875 24667 99999999999999999
Q ss_pred chhHHhhhhhccCCCCC------------CCHHHHHHHHHhhHHHHhhcC
Q 024780 225 PRVETRFFLSVYPRVDK------------HDKTLLKFAKLDFNLVQRIHQ 262 (262)
Q Consensus 225 ~RleaR~yI~~Y~~~~~------------~n~~LLelAklDFn~~Qs~hq 262 (262)
||||||+||+.|++++. +|++||||||||||+||++||
T Consensus 401 ~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq 450 (764)
T 3p5p_A 401 PRLEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQ 450 (764)
T ss_dssp HHHHHHHHHHHCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcccchhhhcccccccccccHHHHHHHHHHHHHHHHHhH
Confidence 99999999999998865 399999999999999999997
No 8
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=4.2e-61 Score=490.88 Aligned_cols=183 Identities=32% Similarity=0.553 Sum_probs=169.4
Q ss_pred CCChhhhhhhhHHHHHhCcccccHHHHHHHHHHHHhccCC-C------CCCCchhhHHHHHHHHHhcCcccccccccccc
Q 024780 78 ADTPAQKLQLVDAVQRLGVAYHFEQEIEDALEKIYHDDFD-N------NDDVDLYSVSLRFRLLRQQGFKVPCDVFEKFK 150 (262)
Q Consensus 78 ~~d~~~~L~lID~LqRLGI~yhFe~EI~~~L~~iy~~~~~-~------~~~~dL~~~AL~FRLLRqhGy~VS~DvF~~Fk 150 (262)
|.|++++|+|||+||||||+|||++||+++|+.||++|.+ . ....||++|||+|||||||||+||||||++|+
T Consensus 267 P~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~ 346 (785)
T 3s9v_A 267 PLDLFERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFR 346 (785)
T ss_dssp CCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGB
T ss_pred CCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhccccccccCCCCCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 5789999999999999999999999999999999998832 1 11369999999999999999999999999999
Q ss_pred ccccccccch---hhcHHHHHHHHHhhccCCcCchHHHHHHHHHHHHHHhhhcC--------CCCChhHHHHHHHhcCCC
Q 024780 151 DDEGKFKASL---VKDVQGILSLYEAGHLAIRGEDILDEAIAFTRTHLKSMVSD--------DVCPNNLAEQINHALDCP 219 (262)
Q Consensus 151 d~~G~F~~~l---~~Dv~glLsLYeAS~L~~~gE~iLdeA~~Ft~~~L~~~~~~--------~~~~~~L~~~V~~aL~~P 219 (262)
|++|+|++++ .+||+|||+|||||||++|||+|||||+.||++||++.+.. ++++ |+++|+|||++|
T Consensus 347 d~~g~F~~~~~e~~~dv~g~L~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~d~~~~~~~--L~~eV~~aL~~P 424 (785)
T 3s9v_A 347 DENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAFKKN--IRGEVEYALKYP 424 (785)
T ss_dssp CTTSCBCSSTTCCCCCHHHHHHHHHHHTSCCTTCHHHHHHHHHHHHHHHHHTTTCCTTCTTCSSSC--HHHHHHHHHHSC
T ss_pred hcCCCeeeccccccccccccHHHHhHhhcCCCCcHHHHHHHHHHHHHHHHHHhccccccccccCCc--HHHHHHHHhCCc
Confidence 9999999866 69999999999999999999999999999999999998753 4566 999999999999
Q ss_pred ccCCcchhHHhhhhhccCCCCCC------------CHHHHHHHHHhhHHHHhhcC
Q 024780 220 LRRALPRVETRFFLSVYPRVDKH------------DKTLLKFAKLDFNLVQRIHQ 262 (262)
Q Consensus 220 ~h~~l~RleaR~yI~~Y~~~~~~------------n~~LLelAklDFn~~Qs~hq 262 (262)
||+++||||||+||+.|++++.+ |++||||||||||+||++||
T Consensus 425 ~~~~l~RleaR~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq 479 (785)
T 3s9v_A 425 WHKSMPRLEARSYIENYGPDDVWLGKTVYMMPYISNEKYLELAKLDFNKVQSIHQ 479 (785)
T ss_dssp GGGCCHHHHHHHHHHHCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCchHHHHHHHHHHhcccchhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988753 99999999999999999997
No 9
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=3.6e-61 Score=493.02 Aligned_cols=183 Identities=38% Similarity=0.616 Sum_probs=166.9
Q ss_pred CCChhhhhhhhHHHHHhCcccccHHHHHHHHHHHHhccCC-------CCCCCchhhHHHHHHHHHhcCcccccccccccc
Q 024780 78 ADTPAQKLQLVDAVQRLGVAYHFEQEIEDALEKIYHDDFD-------NNDDVDLYSVSLRFRLLRQQGFKVPCDVFEKFK 150 (262)
Q Consensus 78 ~~d~~~~L~lID~LqRLGI~yhFe~EI~~~L~~iy~~~~~-------~~~~~dL~~~AL~FRLLRqhGy~VS~DvF~~Fk 150 (262)
|.|++++|+|||+||||||+|||++||+++|++||++|.+ .....||++|||+|||||||||+||||||++|+
T Consensus 295 P~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~ 374 (817)
T 3sdr_A 295 PVDLLERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNFK 374 (817)
T ss_dssp CCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGB
T ss_pred CCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHHcCCCccHhHHHHHh
Confidence 5799999999999999999999999999999999998832 111369999999999999999999999999999
Q ss_pred ccccccccch---hhcHHHHHHHHHhhccCCcCchHHHHHHHHHHHHHHhhhcC--------CCCChhHHHHHHHhcCCC
Q 024780 151 DDEGKFKASL---VKDVQGILSLYEAGHLAIRGEDILDEAIAFTRTHLKSMVSD--------DVCPNNLAEQINHALDCP 219 (262)
Q Consensus 151 d~~G~F~~~l---~~Dv~glLsLYeAS~L~~~gE~iLdeA~~Ft~~~L~~~~~~--------~~~~~~L~~~V~~aL~~P 219 (262)
|++|+|++++ .+||+|||+|||||||++|||+|||||+.||++||++.+.. ++++ |+++|+|||++|
T Consensus 375 d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~~~~~~~~~--L~~eV~~aL~~P 452 (817)
T 3sdr_A 375 DANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSAWNNKQN--LSQEIKYALKTS 452 (817)
T ss_dssp CC--CBCCCSSCHHHHHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTSGGGGSHHHHHTT--HHHHHHHHHHCC
T ss_pred hcCCCceechhhhchhhHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhccccccccccCCc--HHHHHHHHhcCc
Confidence 9999999855 69999999999999999999999999999999999998753 1356 999999999999
Q ss_pred ccCCcchhHHhhhhhccCCCCC------------CCHHHHHHHHHhhHHHHhhcC
Q 024780 220 LRRALPRVETRFFLSVYPRVDK------------HDKTLLKFAKLDFNLVQRIHQ 262 (262)
Q Consensus 220 ~h~~l~RleaR~yI~~Y~~~~~------------~n~~LLelAklDFn~~Qs~hq 262 (262)
||+++||||||+||+.|++++. +|++||||||||||+||++||
T Consensus 453 ~~~~l~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq 507 (817)
T 3sdr_A 453 WHASVPRVEAKRYCQVYRPDYARIAKCVYKLPYVNNEKFLELGKLDFNIIQSIHQ 507 (817)
T ss_dssp STTCCHHHHHHHHHTTCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccChHHHHHHHHHHhCccchhhhhhcccccccccHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998875 499999999999999999997
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=100.00 E-value=7.4e-60 Score=477.72 Aligned_cols=200 Identities=33% Similarity=0.508 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHHHhhc----CCChhhhhhhhHHHHHhCcccccHHHHHHHHHHHHhccC-CC------CCCCchhhHH
Q 024780 60 QEEYEALKQEVRSMITAT----ADTPAQKLQLVDAVQRLGVAYHFEQEIEDALEKIYHDDF-DN------NDDVDLYSVS 128 (262)
Q Consensus 60 ~~~~e~LkeeVr~ml~~~----~~d~~~~L~lID~LqRLGI~yhFe~EI~~~L~~iy~~~~-~~------~~~~dL~~~A 128 (262)
.+..+-|+..|+++.... |.|++++|+|||+||||||+|||++||+++|+.+|++|. +. ....||++||
T Consensus 220 ~~~l~YL~~~v~k~~g~VP~~yP~d~~e~L~lID~LqRLGIs~hFe~EI~~~L~~i~~~~~~~g~~~~~~~~~~DL~~tA 299 (727)
T 3pya_A 220 SNCLEYLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTA 299 (727)
T ss_dssp HHHHHHHHHHHHHTTTCCCSSCCCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHTCCTTCCCSSSSCSCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcCcccccCCCCCCHHHHH
Confidence 456778999998876432 579999999999999999999999999999999999872 21 1135999999
Q ss_pred HHHHHHHhcCccccccccccccccccccccc---hhhcHHHHHHHHHhhccCCcCchHHHHHHHHHHHHHHhhhcC--C-
Q 024780 129 LRFRLLRQQGFKVPCDVFEKFKDDEGKFKAS---LVKDVQGILSLYEAGHLAIRGEDILDEAIAFTRTHLKSMVSD--D- 202 (262)
Q Consensus 129 L~FRLLRqhGy~VS~DvF~~Fkd~~G~F~~~---l~~Dv~glLsLYeAS~L~~~gE~iLdeA~~Ft~~~L~~~~~~--~- 202 (262)
|+|||||||||+||||||++|+ ++|+|++. +.+|++|||+|||||||++|||+|||||+.||+++|++.+.. +
T Consensus 300 L~FRLLRqhGy~VS~DvF~~Fk-~~G~F~~~~~e~~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~ 378 (727)
T 3pya_A 300 MAFRLLRQHGYQVSADVFKNFE-KEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREELI 378 (727)
T ss_dssp HHHHHHHHTTCCCCGGGGGGGE-ETTEECSSTTCCCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCHHHHHhcc-CCCcccccccccccccHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999 88999843 468999999999999999999999999999999999998742 2
Q ss_pred -----CCChhHHHHHHHhcCCCccCCcchhHHhhhhhccCCCCC-------------CCHHHHHHHHHhhHHHHhhcC
Q 024780 203 -----VCPNNLAEQINHALDCPLRRALPRVETRFFLSVYPRVDK-------------HDKTLLKFAKLDFNLVQRIHQ 262 (262)
Q Consensus 203 -----~~~~~L~~~V~~aL~~P~h~~l~RleaR~yI~~Y~~~~~-------------~n~~LLelAklDFn~~Qs~hq 262 (262)
+++ |+++|+|||++||||++||||||+||+.|+++++ +|+.||||||+|||+||++||
T Consensus 379 dkw~~~~~--L~~~V~~aL~~P~~~~l~RleaR~yI~~Y~~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq 454 (727)
T 3pya_A 379 DKWIIMKD--LPGEIGFALEIPWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNNGYLELAKQDYNNCQAQHQ 454 (727)
T ss_dssp CSSEECSC--HHHHHHHHHHSCGGGCCHHHHHHHHHHHCCGGGCEEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCc--HHHHHHHHhcCcHhcCChHHHHHHHHHHhccCcchhhhhhhccccccccHHHHHHHHHhHHHHHHHhH
Confidence 456 9999999999999999999999999999997654 699999999999999999997
No 11
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=97.50 E-value=2.7e-05 Score=80.23 Aligned_cols=47 Identities=23% Similarity=0.382 Sum_probs=27.8
Q ss_pred ccCCCCCCCCCCCCcccccccCCCCccccchHHHHHHHHHHHHHHHHh
Q 024780 28 KTGRPIEGFHPSLWGDHFLTLASDCETNDTTHQEEYEALKQEVRSMIT 75 (262)
Q Consensus 28 ~~~Rr~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~e~LkeeVr~ml~ 75 (262)
.+.||+|||+||+|+++|+++.... ..++.+.+++++|+++||+||.
T Consensus 22 ~~~Rrsany~Ps~W~~~~i~sl~~~-~~~~~~~~~~~~Lie~VK~~l~ 68 (817)
T 3sdr_A 22 GLIRRTANPHPNVWGYDLVHSLKSP-YIDSSYRERAEVLVSEIKAMLN 68 (817)
T ss_dssp -------------CHHHHHHTCCCG-GGSHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCCCCCCCCCeeeccCCc-ccchhHHHHHHHHHHHHHHHhc
Confidence 3589999999999999999864322 2457889999999999999997
No 12
>1pd3_A Nonstructural protein NS2; influenza virus A, NEP/NS2, unknown function; 2.60A {Influenza a virus} SCOP: a.30.3.1
Probab=46.90 E-value=17 Score=25.11 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHhhcCCChhhhhhhhHHHHHh
Q 024780 62 EYEALKQEVRSMITATADTPAQKLQLVDAVQRL 94 (262)
Q Consensus 62 ~~e~LkeeVr~ml~~~~~d~~~~L~lID~LqRL 94 (262)
++.-|.+|||.-|.. +.+.++++.++.+||-|
T Consensus 17 eIRwlIeE~Rh~Lk~-TensfeQItfmqalQLl 48 (58)
T 1pd3_A 17 EIRWLIEEVRHRLKI-TENSFEQITFMQALQLL 48 (58)
T ss_dssp HHHHHHHHHHHTCCC-CTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-hhchHHHHHHHHHHHHH
Confidence 455567778777764 67899999999888864
No 13
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=42.17 E-value=12 Score=38.43 Aligned_cols=41 Identities=20% Similarity=0.502 Sum_probs=15.7
Q ss_pred CCCCCCCcccccccCCCCccccchHHHHHHHHHHHHHHHHh
Q 024780 35 GFHPSLWGDHFLTLASDCETNDTTHQEEYEALKQEVRSMIT 75 (262)
Q Consensus 35 ~~~PsiW~d~fl~~~~~~~~~~~~~~~~~e~LkeeVr~ml~ 75 (262)
+|+|++|++.++............+.++++.++++||+||.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 45 (785)
T 3s9v_A 5 EFPPGFWKDDLIDSLTSSHKVAASDEKRIETLISEIKNMFR 45 (785)
T ss_dssp ----------------------CCHHHHHHHHHHHHHHHHH
T ss_pred cCCcccCcccccccCCCccccCcchhHHHHHHHHHHHHHhh
Confidence 68999999999975322211123456788999999999994
No 14
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=37.33 E-value=1.1e+02 Score=21.68 Aligned_cols=60 Identities=8% Similarity=0.132 Sum_probs=34.9
Q ss_pred CCChhhhhhhhHHHHHhCcccccHHHHHHHHHHHHhccCCCCC---CCchhhHHHHHHHHH-hcCcccccc
Q 024780 78 ADTPAQKLQLVDAVQRLGVAYHFEQEIEDALEKIYHDDFDNND---DVDLYSVSLRFRLLR-QQGFKVPCD 144 (262)
Q Consensus 78 ~~d~~~~L~lID~LqRLGI~yhFe~EI~~~L~~iy~~~~~~~~---~~dL~~~AL~FRLLR-qhGy~VS~D 144 (262)
.+..+..=++...+.++|++ ++|+++++..+=. +..+ ..+. ..+|.-.-.+ +.|+.++..
T Consensus 23 ~dG~I~~~el~~~l~~~g~~---~~~~~~i~~~~D~---d~dG~i~~~EF-~~~~~~~~~~~~~g~~lP~~ 86 (95)
T 1c07_A 23 MDGFVSGLEVREIFLKTGLP---STLLAHIWSLCDT---KDCGKLSKDQF-ALAFHLISQKLIKGIDPPHV 86 (95)
T ss_dssp CSSEECHHHHHHHHHTTTCC---HHHHHHHHHHHCT---TCSSSEETTTH-HHHHHHHHHHHTSCCCCCSS
T ss_pred CCCcEeHHHHHHHHHHcCCC---HHHHHHHHHHHCC---CCCCcCCHHHH-HHHHHHHHHHHHcCCCCCCc
Confidence 34556666788889999976 6777776655411 1111 1232 3344333334 799988764
No 15
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=26.08 E-value=1.7e+02 Score=20.41 Aligned_cols=70 Identities=9% Similarity=0.130 Sum_probs=39.2
Q ss_pred HHHHHHhh---cCCChhhhhhhhHHHHHhCcccccHHHHHHHHHHHHhccCCCCCCCc--hhhHHHHHHHHHhcCccccc
Q 024780 69 EVRSMITA---TADTPAQKLQLVDAVQRLGVAYHFEQEIEDALEKIYHDDFDNNDDVD--LYSVSLRFRLLRQQGFKVPC 143 (262)
Q Consensus 69 eVr~ml~~---~~~d~~~~L~lID~LqRLGI~yhFe~EI~~~L~~iy~~~~~~~~~~d--L~~~AL~FRLLRqhGy~VS~ 143 (262)
+++.+|.. ..+..+..=++...+.++|++ ++|+.+++..+=. +..+.-| =+..++.-.-.++.|+.+++
T Consensus 10 ~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~---~~~~~~i~~~~D~---d~dG~i~~~EF~~~~~~~~~~~~g~~lp~ 83 (92)
T 1fi6_A 10 YYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLP---ILELSHIWELSDF---DKDGALTLDEFCAAFHLVVARKNGYDLPE 83 (92)
T ss_dssp HHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSC---HHHHHHHHHHHCT---TCSSEEEHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCC---HHHHHHHHHHHCC---CCCCCCCHHHHHHHHHHHHHHHcCCCCCc
Confidence 45555543 123456667788889999976 5677776654411 1111112 22334444445688999886
Q ss_pred c
Q 024780 144 D 144 (262)
Q Consensus 144 D 144 (262)
.
T Consensus 84 ~ 84 (92)
T 1fi6_A 84 K 84 (92)
T ss_dssp C
T ss_pred c
Confidence 4
No 16
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=24.28 E-value=2e+02 Score=20.62 Aligned_cols=65 Identities=14% Similarity=0.165 Sum_probs=42.0
Q ss_pred CChhhhhhhhHHHHHhCcccccHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHHHhcCccccccccc
Q 024780 79 DTPAQKLQLVDAVQRLGVAYHFEQEIEDALEKIYHDDFDNNDDVDLYSVSLRFRLLRQQGFKVPCDVFE 147 (262)
Q Consensus 79 ~d~~~~L~lID~LqRLGI~yhFe~EI~~~L~~iy~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~DvF~ 147 (262)
+..+..=++...+.++|++ ++|+++++..+=... +..-.-+=+..+|.-.-+.|+|+.++.+.+.
T Consensus 25 dG~Is~~el~~~l~~~~l~---~~~l~~i~~~~D~d~-dG~i~~~EF~~~~~~~~~~~~g~~~~~~~l~ 89 (99)
T 1qjt_A 25 TGRVLALDAAAFLKKSGLP---DLILGKIWDLADTDG-KGVLSKQEFFVALRLVACAQNGLEVSLSSLS 89 (99)
T ss_dssp SSCCCSHHHHHHHHTSSSC---HHHHHHHHHHHCCSS-SSSCCSHHHHHHHHHHHHHTTTCCSSGGGCS
T ss_pred CCcCCHHHHHHHHHHcCCC---HHHHHHHHHHHCCCC-CCcCCHHHHHHHHHHHHHHHcCCCCChhhcc
Confidence 3445666777888899976 677777665542111 0111224456778888889999999977654
Done!