BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024784
(262 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HYP|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
pdb|3HYP|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
Length = 141
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 109 GLFLFTRLDFGVSLKDLSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQY 168
G TR +F + D + E KP +++FYADWC C+ +AP + + ++Y
Sbjct: 23 GTIHLTRAEFLKKIADYENHS--KEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEY 80
Query: 169 KDRVNFVMLNVDNTKWEQEL-DEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDA 227
++ +NVD E EL +FG++GIP F+ +G + N +G L ++ L +D
Sbjct: 81 AGKIYIYKVNVDK---EPELARDFGIQGIPTIWFVPMKGEPQVN-MGALSKEQLKGYIDK 136
Query: 228 L 228
+
Sbjct: 137 V 137
>pdb|3HXS|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp
pdb|3HXS|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp
Length = 141
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 109 GLFLFTRLDFGVSLKDLSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQY 168
G TR +F + D + E KP +++FYADWC C+ +AP + + ++Y
Sbjct: 23 GTIHLTRAEFLKKIADYENHS--KEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEY 80
Query: 169 KDRVNFVMLNVDNTKWEQEL-DEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDA 227
++ +NVD E EL +FG++ IP F+ +G + N +G L ++ L +D
Sbjct: 81 AGKIYIYKVNVDK---EPELARDFGIQSIPTIWFVPMKGEPQVN-MGALSKEQLKGYIDK 136
Query: 228 L 228
+
Sbjct: 137 V 137
>pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides
Vulgatus
Length = 136
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 131 PYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQEL-D 189
P E KP +++FYADWC C+ +AP + + ++Y ++ V+ VD K EQEL
Sbjct: 30 PEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQI--VIYKVDTEK-EQELAG 86
Query: 190 EFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVD 226
FG+ IP F+ EG E G +P+ + +D
Sbjct: 87 AFGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAID 122
>pdb|1T00|A Chain A, The Structure Of Thioredoxin From S. Coelicolor
Length = 112
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG 192
+ L N KP +++F+A WC CR++AP + + +Y D++ V LN+D ++G
Sbjct: 17 QDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAA--KYG 74
Query: 193 VEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVD 226
V IP + G +VG P+ ++ +++
Sbjct: 75 VMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLE 107
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 136 LTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEG 195
L + P +++F+A WC CR +AP V + +YKD++ V LN D + E+G+
Sbjct: 16 LESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDES--PNVASEYGIRS 73
Query: 196 IPHFAFLDREGNEEGNVVGRLPRQYLLENVD 226
IP + G + ++G +P+ +++ V+
Sbjct: 74 IPTIMVF-KGGKKCETIIGAVPKATIVQTVE 103
>pdb|1NW2|A Chain A, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|B Chain B, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|C Chain C, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|D Chain D, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|E Chain E, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|F Chain F, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|G Chain G, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|H Chain H, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
Length = 105
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
++QA+ KP +++F+A WC CR +AP + + + D+V LNVD + +F
Sbjct: 10 FQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP--ETTSQF 67
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLPRQYL 221
G+ IP L + G ++G P++ L
Sbjct: 68 GIMSIPTL-ILFKGGEPVKQLIGYQPKEQL 96
>pdb|1QUW|A Chain A, Solution Structure Of The Thioredoxin From Bacillus
Acidocaldarius
Length = 105
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
++QA+ KP +++F+A WC CR +AP + + + D+V LNVD + +F
Sbjct: 10 FQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP--ETTSQF 67
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLPRQYL 221
G+ IP L + G ++G P++ L
Sbjct: 68 GIMSIPTL-ILFKGGRPVKQLIGYQPKEQL 96
>pdb|1RQM|A Chain A, Solution Structure Of The K18gR82E ALICYCLOBACILLUS
Acidocaldarius Thioredoxin Mutant
Length = 105
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
++QA+ P +++F+A WC CR +AP + + + D+V LNVD + +F
Sbjct: 10 FQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP--ETTSQF 67
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLPRQYL 221
G+ IP L + G ++G P++ L
Sbjct: 68 GIMSIPTL-ILFKGGEPVKQLIGYQPKEQL 96
>pdb|1NSW|A Chain A, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|B Chain B, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|C Chain C, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|D Chain D, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
Length = 105
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
++QA+ P +++F+A WC CR +AP + + + D+V LNVD + +F
Sbjct: 10 FQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP--ETTSQF 67
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLPRQYL 221
G+ IP L + G ++G P++ L
Sbjct: 68 GIMSIPTL-ILFKGGRPVKQLIGYQPKEQL 96
>pdb|2VLT|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLT|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLU|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLU|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
Length = 122
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 120 VSLKDLSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNV 179
+S+ L + E+A T K V++F A WC CR +AP + +++ N V L V
Sbjct: 15 ISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFP---NAVFLKV 71
Query: 180 DNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQ 219
D + + ++F VE +P F F+ +EG+ + VVG + +
Sbjct: 72 DVDELKPIAEQFSVEAMPTFLFM-KEGDVKDRVVGAIKEE 110
>pdb|1XWA|A Chain A, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|B Chain B, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|C Chain C, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|D Chain D, Drospohila Thioredoxin, Oxidized, P41212
Length = 111
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 138 NGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIP 197
+GK VL+F+A WC C+ ++P + + Q+ D N V+L VD + E E+ + +P
Sbjct: 24 SGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECEDIAMEYNISSMP 81
Query: 198 HFAFL 202
F FL
Sbjct: 82 TFVFL 86
>pdb|1XW9|A Chain A, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|B Chain B, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|C Chain C, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|D Chain D, Drospohila Thioredoxin, Oxidized, P21
pdb|1XWB|A Chain A, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|B Chain B, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|C Chain C, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|D Chain D, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWC|A Chain A, Drosophila Thioredoxin, Reduced, P6522
Length = 106
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 138 NGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIP 197
+GK VL+F+A WC C+ ++P + + Q+ D N V+L VD + E E+ + +P
Sbjct: 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECEDIAMEYNISSMP 76
Query: 198 HFAFL 202
F FL
Sbjct: 77 TFVFL 81
>pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 125
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 120 VSLKDLSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNV 179
+S+ L + E+A T K V++F A WC R +AP + +++ N V L V
Sbjct: 18 ISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPSRIMAPVFADLAKKFP---NAVFLKV 74
Query: 180 DNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQ 219
D + + ++F VE +P F F+ +EG+ + VVG + +
Sbjct: 75 DVDELKPIAEQFSVEAMPTFLFM-KEGDVKDRVVGAIKEE 113
>pdb|3OR5|A Chain A, Crystal Structure Of Thiol:disulfide Interchange Protein,
Thioredoxin Family Protein From Chlorobium Tepidum Tls
Length = 165
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 26/120 (21%)
Query: 121 SLKDLSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR--------V 172
S ++ P+ A GK ++ F+A WC CR PD +V++ + R V
Sbjct: 16 SFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDXVQVQKTWASRGFTFVGIAV 75
Query: 173 NFVMLNVDNTKWEQEL------------------DEFGVEGIPHFAFLDREGNEEGNVVG 214
N + NV N Q + + G+ GIP +D GN G +VG
Sbjct: 76 NEQLPNVKNYXKTQGIIYPVXXATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVG 135
>pdb|2DJ3|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 133
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHF 199
K ++EFYA WC C++L P + ++YK + + V+ +D T + D++ VEG P
Sbjct: 26 KDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTI 85
Query: 200 AF 201
F
Sbjct: 86 YF 87
>pdb|2H72|A Chain A, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
pdb|2H72|B Chain B, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
Length = 108
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G+ VG L + L E +DA
Sbjct: 81 FKNGDVAATKVGALSKGQLKEFLDA 105
>pdb|2FA4|A Chain A, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
pdb|2FA4|B Chain B, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
Length = 111
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 128 AALPYEQALTNG-KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQ 186
+A Y+ AL +G K V++F+A WC C+ +AP + + +QY D F L+VD
Sbjct: 14 SASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAA-FYKLDVDEVSDVA 72
Query: 187 ELDEFGVEGIPHFAFLDREGNEEGNVVGRLP---RQYLLENV 225
+ E V +P F + G E VVG P +Q + NV
Sbjct: 73 QKAE--VSSMPTLIFY-KGGKEVTRVVGANPAAIKQAIASNV 111
>pdb|2H71|A Chain A, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
pdb|2H71|B Chain B, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
Length = 108
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + ++Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2HSY|A Chain A, Solution Structure Of Thioredoxin 2 From Saccharomyces
Cerevisiae
Length = 104
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 128 AALPYEQALTNG-KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQ 186
+A Y+ AL +G K V++F+A WC C+ +AP + + +QY D F L+VD
Sbjct: 7 SASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAA-FYKLDVDEVSDVA 65
Query: 187 ELDEFGVEGIPHFAFLDREGNEEGNVVGRLP---RQYLLENV 225
+ E V +P F + G E VVG P +Q + NV
Sbjct: 66 QKAE--VSSMPTLIFY-KGGKEVTRVVGANPAAIKQAIASNV 104
>pdb|2H73|A Chain A, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
pdb|2H73|B Chain B, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
Length = 108
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILEEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2H76|A Chain A, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
pdb|2H76|B Chain B, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
Length = 108
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2H75|A Chain A, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
pdb|2H75|B Chain B, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
Length = 108
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2H70|A Chain A, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
pdb|2H70|B Chain B, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
Length = 108
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2H74|A Chain A, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
pdb|2H74|B Chain B, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
Length = 108
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|3HZ4|A Chain A, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
pdb|3HZ4|B Chain B, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
Length = 140
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG 192
+Q + KP V+ FY+ C C+ P ++Y F +N+ W E ++G
Sbjct: 18 QQVEDSKKPVVVXFYSPACPYCKAXEPYFEEYAKEYGSSAVFGRINIATNPWTAE--KYG 75
Query: 193 VEGIPHFAFLDREGNEEGNVVGRLPRQYLLENV-DALAHGKASIPHARIVGQ 243
V+G P F F G VG++ L V D L HG+ I + VGQ
Sbjct: 76 VQGTPTFKFFCH-GRPVWEQVGQIYPSILKNAVRDXLQHGEECIRKSTPVGQ 126
>pdb|2TRX|A Chain A, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|2TRX|B Chain B, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|1T7P|B Chain B, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|B Chain B, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template
pdb|1SKW|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|B Chain B, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|D Chain D, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|B Chain B, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|B Chain B, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template And An Incoming Nucleotide
pdb|1TK0|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Ddctp At The Insertion Site
pdb|1TK5|B Chain B, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Damp At The Elongation Site
pdb|1TKD|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Dcmp At The Elongation Site
pdb|1T8E|B Chain B, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|B Chain B, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|B Chain B, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|B Chain B, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide.
pdb|2BTO|T Chain T, Structure Of Btuba From Prosthecobacter Dejongeii
pdb|1ZYQ|B Chain B, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
pdb|2AJQ|B Chain B, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|I Chain I, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2H6X|A Chain A, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
pdb|2H6X|B Chain B, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
Length = 108
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|1ZZY|A Chain A, Crystal Structure Of Thioredoxin Mutant L7v
pdb|1ZZY|B Chain B, Crystal Structure Of Thioredoxin Mutant L7v
Length = 108
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2FWE|A Chain A, Crystal Structure Of The C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd (Oxidized Form)
pdb|2FWF|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Reduced Form)
pdb|2FWG|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Photoreduced
Form)
pdb|2FWH|A Chain A, Atomic Resolution Crystal Structure Of The C-Terminal
Domain Of The Electron Transfer Catalyst Dsbd (Reduced
Form At Ph7)
Length = 134
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQE----LDEFGVE 194
GKP +L+ YADWC C+E + Q K + V+L + T + + L V
Sbjct: 31 GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVL 90
Query: 195 GIPHFAFLDREGNE 208
G+P F D +G E
Sbjct: 91 GLPTILFFDGQGQE 104
>pdb|1XOB|A Chain A, Thioredoxin (Reduced Dithio Form), Nmr, 20 Structures
pdb|1XOA|A Chain A, Thioredoxin (Oxidized Disulfide Form), Nmr, 20 Structures
Length = 108
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|1UC7|A Chain A, Crystal Structure Of Dsbdgamma
pdb|1UC7|B Chain B, Crystal Structure Of Dsbdgamma
Length = 125
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQE----LDEFGVE 194
GKP +L+ YADWC C+E + Q K + V+L + T + + L V
Sbjct: 28 GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVL 87
Query: 195 GIPHFAFLDREGNE 208
G+P F D +G E
Sbjct: 88 GLPTILFFDGQGQE 101
>pdb|2FD3|A Chain A, Crystal Structure Of Thioredoxin Mutant P34h
pdb|2FD3|B Chain B, Crystal Structure Of Thioredoxin Mutant P34h
Length = 108
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGHCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2H6Z|A Chain A, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
pdb|2H6Z|B Chain B, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
Length = 108
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDDIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|1TXX|A Chain A, Active-Site Variant Of E.Coli Thioredoxin
Length = 108
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNIDQN--PGTAPKYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2H6Y|A Chain A, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
pdb|2H6Y|B Chain B, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
Length = 108
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 34 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 90
Query: 203 DREGNEEGNVVGRLPRQYLLENVDALAHGKA 233
+ G VG L + L E +DA G A
Sbjct: 91 FKNGEVAATKVGALSKGQLKEFLDANLAGSA 121
>pdb|2EIQ|A Chain A, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIQ|B Chain B, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAACKVGALSKGQLKEFLDA 105
>pdb|2J23|A Chain A, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
pdb|2J23|B Chain B, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
Length = 121
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQ-YKDRVNFVMLNVDNTKWEQELDE 190
++Q K V++F+A WC C+ + P ++ D+V F ++VD Q E
Sbjct: 26 FKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ--SQIAQE 83
Query: 191 FGVEGIPHFAFLDREGNEEGNVVGRLPRQ 219
G+ +P F F + G + VVG P +
Sbjct: 84 VGIRAMPTFVFF-KNGQKIDTVVGADPSK 111
>pdb|2I9H|A Chain A, Nmr Solution Structure Of The Reduced Form Of Thioredoxin
1 From Yeast (Trx1)
Length = 103
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
++ A+ K V++FYA WC C+ +AP + + +QY + +F L+VD + +E
Sbjct: 11 FDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELGDVAQKNE- 68
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLP 217
V +P L + G E VVG P
Sbjct: 69 -VSAMPTL-LLFKNGKEVAKVVGANP 92
>pdb|3F3Q|A Chain A, Crystal Structure Of The Oxidised Form Of Thioredoxin 1
From Saccharomyces Cerevisiae
Length = 109
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
++ A+ K V++FYA WC C+ +AP + + +QY + +F L+VD + +E
Sbjct: 17 FDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELGDVAQKNE- 74
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLP 217
V +P L + G E VVG P
Sbjct: 75 -VSAMPTL-LLFKNGKEVAKVVGANP 98
>pdb|2TIR|A Chain A, Crystal Structure Analysis Of A Mutant Escherichia Coli
Thioredoxin In Which Lysine 36 Is Replaced By Glutamic
Acid
Length = 108
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCEMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|3DYR|A Chain A, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
pdb|3DYR|B Chain B, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
Length = 111
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ G P L
Sbjct: 25 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGTPTL-LL 81
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 82 FKNGEVAATKVGALSKGQLKEFLDA 106
>pdb|1WMJ|A Chain A, Solution Structure Of Thioredoxin Type H From Oryza Sativa
Length = 130
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 134 QALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRV-NFVMLNVDNTKWEQELDEFG 192
+A GK +++F A WC CR +AP V +Y + V L VD + ++ +++
Sbjct: 31 KAKEAGKVVIIDFTASWCGPCRFIAP----VFAEYAKKFPGAVFLKVDVDELKEVAEKYN 86
Query: 193 VEGIPHFAFLDREGNEEGNVVGRLPRQYLLEN 224
VE +P F F+ ++G E VVG R+ L+N
Sbjct: 87 VEAMPTFLFI-KDGAEADKVVG--ARKDDLQN 115
>pdb|1GL8|A Chain A, Solution Structure Of Thioredoxin M From Spinach, Oxidized
Form
Length = 104
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG 192
E L + P +++F+A WC C+ +AP + + ++Y ++ LN D ++
Sbjct: 11 EFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP--GIATQYN 68
Query: 193 VEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVD 226
+ IP F + G + +++G +P+ L ++++
Sbjct: 69 IRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIE 101
>pdb|1V98|A Chain A, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
pdb|1V98|B Chain B, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
Length = 140
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
+ Q + T+++F+A WC CR ++P + + + + R+ V +NVD +
Sbjct: 43 FAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHP--GLAARY 100
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGK 232
GV +P R G VG PR+ L E + G+
Sbjct: 101 GVRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLEGR 140
>pdb|2LJA|A Chain A, Solution Structure Of A Putative Thiol-Disulfide
Oxidoreductase From Bacteroides Vulgatus
Length = 152
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 22/90 (24%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR-VNFVMLNVDNTK--WEQE-------- 187
GK ++ +A WC CR P + +E++Y + ++FV L+ D K WE
Sbjct: 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKG 89
Query: 188 -----------LDEFGVEGIPHFAFLDREG 206
+D + + GIP F LDR+G
Sbjct: 90 IQLHMGTDRTFMDAYLINGIPRFILLDRDG 119
>pdb|1FB0|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB0|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB6|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
pdb|1FB6|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
Length = 105
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG 192
E L + P +++F+A WC C+ +AP + + ++Y ++ LN D ++
Sbjct: 12 EFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP--GIATQYN 69
Query: 193 VEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVD 226
+ IP F + G + +++G +P+ L ++++
Sbjct: 70 IRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIE 102
>pdb|2GZY|A Chain A, Solution Structures Of The Reduced Form Of Thioredoxin
From Bacillus Subtilis
pdb|2GZZ|A Chain A, Solution Structures Of The Oxidized Form Of Thioredoxin
From Bacillus Subtilis
Length = 104
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 145 EFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDR 204
+F+A WC C+ +AP + ++Q+ D++ V ++VD ++ ++GV IP L +
Sbjct: 23 DFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDEN--QETAGKYGVMSIPTLLVL-K 79
Query: 205 EGNEEGNVVGRLPRQYLLENVD 226
+G VG P++ L E V+
Sbjct: 80 DGEVVETSVGFKPKEALQELVN 101
>pdb|1X5C|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase
Length = 121
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 135 ALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVE 194
A K +EFYA WC C++LAP ++ + YKD N V+ +D+T E++ V
Sbjct: 21 AFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA--NEVEAVKVH 78
Query: 195 GIPHFAFL 202
P F
Sbjct: 79 SFPTLKFF 86
>pdb|3UEM|A Chain A, Crystal Structure Of Human Pdi Bb'a' Domains
Length = 361
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 135 ALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVE 194
A K +EFYA WC C++LAP ++ + YKD N V+ +D+T E++ V
Sbjct: 263 AFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA--NEVEAVKVH 320
Query: 195 GIPHFAFL 202
P F
Sbjct: 321 SFPTLKFF 328
>pdb|2F51|A Chain A, Structure Of Trichomonas Vaginalis Thioredoxin
pdb|2F51|B Chain B, Structure Of Trichomonas Vaginalis Thioredoxin
Length = 118
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 142 TVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAF 201
+++F+A WC C+ L + + + KD V F+ ++VD K D +GV IP F
Sbjct: 26 VLVDFFATWCGPCQRLGQILPSIAEANKD-VTFIKVDVD--KNGNAADAYGVSSIPALFF 82
Query: 202 LDREGNE 208
+ +EGNE
Sbjct: 83 VKKEGNE 89
>pdb|1ZCP|A Chain A, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|B Chain B, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|C Chain C, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|D Chain D, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
Length = 108
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC + +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCACAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2FCH|A Chain A, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|B Chain B, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|C Chain C, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|D Chain D, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|E Chain E, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|F Chain F, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|G Chain G, Crystal Structure Of Thioredoxin Mutant G74s
Length = 108
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ IP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRSIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|1ZZO|A Chain A, Structure Of Mtb Dsbf In Its Oxidized Form
Length = 136
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 31/115 (26%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFV----------------------- 175
GKP VL F+A WC C+ AP V +V + + V FV
Sbjct: 25 GKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE-VTFVGVAGLDQVPAMQEFVNKYPVKTF 83
Query: 176 --MLNVDNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDAL 228
+ + D + W FGV P +AF+D GN + V GR+ + L V AL
Sbjct: 84 TQLADTDGSVWA----NFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTAL 133
>pdb|3IOS|A Chain A, Structure Of Mtb Dsbf In Its Mixed Oxidized And Reduced
Forms
Length = 150
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 31/115 (26%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFV----------------------- 175
GKP VL F+A WC C+ AP V +V + + V FV
Sbjct: 39 GKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE-VTFVGVAGLDQVPAMQEFVNKYPVKTF 97
Query: 176 --MLNVDNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDAL 228
+ + D + W FGV P +AF+D GN + V GR+ + L V AL
Sbjct: 98 TQLADTDGSVWA----NFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTAL 147
>pdb|1M7T|A Chain A, Solution Structure And Dynamics Of The Human-Escherichia
Coli Thioredoxin Chimera: Insights Into Thermodynamic
Stability
Length = 107
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 132 YEQAL--TNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELD 189
+++AL K V++F A WC C+ + P + + ++Y N + L VD +
Sbjct: 11 FQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS---NVIFLEVDVDDAQDVAP 67
Query: 190 EFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDA 227
++G+ GIP L + G VG L + L E +DA
Sbjct: 68 KYGIRGIPTL-LLFKNGEVAATKVGALSKGQLKEFLDA 104
>pdb|2YJ7|A Chain A, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
pdb|2YJ7|B Chain B, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
Length = 106
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG 192
++ L + KP +++F+A WC CR +AP + + ++Y+ +V V +NVD ++G
Sbjct: 13 QEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENP--NTAAQYG 70
Query: 193 VEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVD 226
+ IP L + G +VG P++ L E +D
Sbjct: 71 IRSIPTL-LLFKNGQVVDRLVGAQPKEALKERID 103
>pdb|2EIO|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKCFLDA 105
>pdb|2O8V|B Chain B, Paps Reductase In A Covalent Complex With Thioredoxin C35a
Length = 128
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC + +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 44 LVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 100
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 101 FKNGEVAATKVGALSKGQLKEFLDA 125
>pdb|4DSS|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Complex With Thioredoxin Trx2
Length = 112
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 128 AALPYEQALTNG-KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQ 186
+A Y+ AL +G K V++F+A WC + +AP + + +QY D F L+VD
Sbjct: 15 SASEYDSALASGDKLVVVDFFATWCGPSKMIAPMIEKFAEQYSDAA-FYKLDVDEVSDVA 73
Query: 187 ELDEFGVEGIPHFAFLDREGNEEGNVVGRLP---RQYLLENV 225
+ E V +P F + G E VVG P +Q + NV
Sbjct: 74 QKAE--VSSMPTLIFY-KGGKEVTRVVGANPAAIKQAIASNV 112
>pdb|3PIN|A Chain A, Crystal Structure Of Mxr1 From Saccharomyces Cerevisiae In
Complex With Trx2
Length = 104
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 128 AALPYEQALTNG-KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQ 186
+A Y+ AL +G K V++F+A WC + +AP + + +QY D F L+VD
Sbjct: 7 SASEYDSALASGDKLVVVDFFATWCGPSKMIAPMIEKFAEQYSDAA-FYKLDVDEVSDVA 65
Query: 187 ELDEFGVEGIPHFAFLDREGNEEGNVVGRLP---RQYLLENV 225
+ E V +P F + G E VVG P +Q + NV
Sbjct: 66 QKAE--VSSMPTLIFY-KGGKEVTRVVGANPAAIKQAIASNV 104
>pdb|2VM1|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM2|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
Length = 118
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 132 YEQALTNGKPT----VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQE 187
++ + NGK T +++F A WC CR +AP +++ + F+ ++VD K E
Sbjct: 17 FDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAI-FLKVDVDELKDVAE 75
Query: 188 LDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGKASIPHARIVGQYSSA 247
+ VE +P F F+ ++G E VD++ G+ H +IV SA
Sbjct: 76 --AYNVEAMPTFLFI-KDG----------------EKVDSVVGGRKDDIHTKIVALMGSA 116
Query: 248 EN 249
Sbjct: 117 ST 118
>pdb|1KEB|A Chain A, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
pdb|1KEB|B Chain B, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
Length = 108
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +A + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKLIASILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2EIR|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYL 221
+ G VG L + L
Sbjct: 81 FKNGEVAATKVGALSKGQL 99
>pdb|1F6M|C Chain C, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|D Chain D, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|G Chain G, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|H Chain H, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 108
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC + +AP + + +Y+ ++ LN+D ++G+ GIP L
Sbjct: 24 LVDFWAEWCGPSKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|1VRS|D Chain D, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
pdb|1VRS|E Chain E, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
pdb|1VRS|F Chain F, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
Length = 134
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQE----LDEFGVE 194
GKP +L+ YADWC +E + Q K + V+L + T + + L V
Sbjct: 31 GKPVMLDLYADWCVASKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVL 90
Query: 195 GIPHFAFLDREGNE 208
G+P F D +G E
Sbjct: 91 GLPTILFFDGQGQE 104
>pdb|2OE0|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE0|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE1|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE1|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE3|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
pdb|2OE3|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
Length = 114
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
V++FYA WC C+ + P + ++ Q Y D V FV +VD + E V +P F L
Sbjct: 34 VIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDES--PDIAKECEVTAMPTFV-L 89
Query: 203 DREGNEEGNVVGRLP 217
++G G ++G P
Sbjct: 90 GKDGQLIGKIIGANP 104
>pdb|1MEK|A Chain A, Human Protein Disulfide Isomerase, Nmr, 40 Structures
Length = 120
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVML-NVDNTKWEQELDE 190
+ +AL K ++EFYA WC C+ LAP+ + + K + + L VD T+ +
Sbjct: 17 FAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQ 76
Query: 191 FGVEGIPHFAFLDREGN 207
+GV G P F R G+
Sbjct: 77 YGVRGYPTIKFF-RNGD 92
>pdb|1THO|A Chain A, Crystal Structure Of A Mutant Escherichia Coli Thioredoxin
With An Arginine Insertion In The Active Site
Length = 109
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 143 VLEFYADWC-EVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAF 201
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++G+ GIP
Sbjct: 24 LVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYGIRGIPTL-L 80
Query: 202 LDREGNEEGNVVGRLPRQYLLENVDA 227
L + G VG L + L E +DA
Sbjct: 81 LFKNGEVAATKVGALSKGQLKEFLDA 106
>pdb|2XBI|A Chain A, Crystal Structure Of Schistosoma Mansoni Thioredoxin At
1.6 Angstrom
Length = 108
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHF 199
K V++F+A WC C+ +AP + ++Y + + + VD K E+ ++ + +P F
Sbjct: 25 KLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETARKYNISAMPTF 80
Query: 200 AFLDREGNEEGNVVG 214
+ + G + G+VVG
Sbjct: 81 IAI-KNGEKVGDVVG 94
>pdb|1F9M|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
pdb|1F9M|B Chain B, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
Length = 112
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQEL-DEFGVEGIPH 198
KP VL+ + WC C+ +AP ++ ++Y D + L +D + + L E G+ +P
Sbjct: 26 KPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD---VIFLKLDCNQENKTLAKELGIRVVPT 82
Query: 199 FAFLDREGNEEGNVVGRLPRQYLLENVDA 227
F L +E + G V G LLE + A
Sbjct: 83 FKIL-KENSVVGEVTGA-KYDKLLEAIQA 109
>pdb|2XBQ|A Chain A, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XBQ|B Chain B, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XC2|A Chain A, Crystal Structure Of Oxidized Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.6 Angstrom
Length = 117
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHF 199
K V++F+A WC C+ +AP + ++Y + + + VD K E+ ++ + +P F
Sbjct: 34 KLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETARKYNISAMPTF 89
Query: 200 AFLDREGNEEGNVVG 214
+ + G + G+VVG
Sbjct: 90 IAI-KNGEKVGDVVG 103
>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
Cppc Active Site Variant
Length = 113
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
+E+ + K V++F A WC C+ +AP + +++ + V F+ ++VD K E E+
Sbjct: 19 FEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN-VTFLKVDVDELKAVAE--EW 75
Query: 192 GVEGIPHFAFLDREGNEEGNVVG 214
VE +P F FL ++G VG
Sbjct: 76 NVEAMPTFIFL-KDGKLVDKTVG 97
>pdb|2VIM|A Chain A, X-Ray Structure Of Fasciola Hepatica Thioredoxin
Length = 104
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPH 198
G+ V++F+A WC CR +AP V + ++ + V F ++VD E+ ++ V +P
Sbjct: 19 GRLIVVDFFAQWCGPCRNIAPKVEALAKEIPE-VEFAKVDVDQN--EEAAAKYSVTAMPT 75
Query: 199 FAFLDREGNE 208
F F+ ++G E
Sbjct: 76 FVFI-KDGKE 84
>pdb|1FAA|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Long Form)
Length = 124
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQEL-DEFGVEGIPH 198
KP VL+ + WC C+ +AP ++ ++Y D + L +D + + L E G+ +P
Sbjct: 38 KPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD---VIFLKLDCNQENKTLAKELGIRVVPT 94
Query: 199 FAFLDREGNEEGNVVGRLPRQYLLENVDA 227
F L +E + G V G LLE + A
Sbjct: 95 FKIL-KENSVVGEVTGA-KYDKLLEAIQA 121
>pdb|3F3R|A Chain A, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
pdb|3F3R|B Chain B, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
Length = 109
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
++ A+ K V++FYA WC + +AP + + +QY + +F L+VD + +E
Sbjct: 17 FDSAIAQDKLVVVDFYATWCGPSKMIAPMIEKFSEQYP-QADFYKLDVDELGDVAQKNE- 74
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLP 217
V +P L + G E VVG P
Sbjct: 75 -VSAMPTL-LLFKNGKEVAKVVGANP 98
>pdb|2I4A|A Chain A, Crystal Structure Of Thioredoxin From The Acidophile
Acetobacter Aceti
Length = 107
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 142 TVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAF 201
+++F+A+WC C+ + P + + +++ +V +N+D+ + + + V IP
Sbjct: 23 VLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDN--PETPNAYQVRSIPTL-M 79
Query: 202 LDREGNEEGNVVGRLPRQYL 221
L R+G VG LP+ L
Sbjct: 80 LVRDGKVIDKKVGALPKSQL 99
>pdb|4EVM|A Chain A, 1.5 Angstrom Crystal Structure Of Soluble Domain Of
Membrane-Anchored Thioredoxin Family Protein From
Streptococcus Pneumoniae Strain Canada Mdr_19a
Length = 138
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 30/120 (25%)
Query: 138 NGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNV------------DNTKWE 185
GK L+F+A WC +C PD + ++ D ++V+L V D W
Sbjct: 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSPGHKGEQSEADFKNWY 78
Query: 186 QELD----------------EFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALA 229
+ LD +GV P AF+D+EG G + + +L+ + LA
Sbjct: 79 KGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKELA 138
>pdb|2PUK|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
pdb|2PUK|G Chain G, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
Length = 106
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG 192
E L + P +++F+A WC + +AP + + ++Y ++ LN D ++
Sbjct: 12 EFVLESEVPVMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEAP--GIATQYN 69
Query: 193 VEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVD 226
+ IP F + G + +++G +P+ L ++++
Sbjct: 70 IRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIE 102
>pdb|3HHV|A Chain A, The Crystal Structure Of The Thioredoxin A2 From
Sulfolobus Solfataricus
Length = 110
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELD-E 190
+++ +T K V++F+A+WC C LAP + + Y +V F LN + + Q++
Sbjct: 16 FDEFITKNKIVVVDFWAEWCAPCLILAPVIEELANDYP-QVAFGKLNTEES---QDIAMR 71
Query: 191 FGVEGIPHFAFLDREGNEEGNVVGRLPRQ 219
+G+ +P F + G ++G +PR+
Sbjct: 72 YGIMSLPTIMFF-KNGELVDQILGAVPRE 99
>pdb|2E0Q|A Chain A, Crystal Structure Of K53e Thioredoxin From Sulfolobus
Tokodaii Strain7
Length = 104
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
++ L + + V++F+A+WC C LAP + + + Y +V F LN D +
Sbjct: 9 FDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYP-QVGFGKLNSDENP--DIAARY 65
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLPRQ 219
GV +P F ++G ++G +PR+
Sbjct: 66 GVMSLPTVIFF-KDGEPVDEIIGAVPRE 92
>pdb|2IPA|A Chain A, Solution Structure Of Trx-Arsc Complex
Length = 104
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 145 EFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDR 204
+F+A WC + +AP + ++Q+ D++ V ++VD ++ ++GV IP L +
Sbjct: 23 DFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDEN--QETAGKYGVMSIPTLLVL-K 79
Query: 205 EGNEEGNVVGRLPRQYLLENVD 226
+G VG P++ L E V+
Sbjct: 80 DGEVVETSVGFKPKEALQELVN 101
>pdb|1THX|A Chain A, Thioredoxin-2
Length = 115
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 134 QALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGV 193
+ L +P ++ F+A WC C+ ++P + Y DR+ V L +D + ++ V
Sbjct: 20 EVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNP--TTVKKYKV 77
Query: 194 EGIPHFAFLDRE 205
EG+P + E
Sbjct: 78 EGVPALRLVKGE 89
>pdb|2VOC|A Chain A, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
pdb|2VOC|B Chain B, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
Length = 112
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 145 EFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDR 204
+F+A WC + +AP + ++Q+ D++ V ++VD ++ ++GV IP L +
Sbjct: 23 DFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDEN--QETAGKYGVMSIPTLLVL-K 79
Query: 205 EGNEEGNVVGRLPRQYLLENVD 226
+G VG P++ L E V+
Sbjct: 80 DGEVVETSVGFKPKEALQELVN 101
>pdb|1SRX|A Chain A, Three-Dimensional Structure Of Escherichia Coli
Thioredoxin-S2 To 2.8 Angstroms Resolution
Length = 108
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A+WC C+ +AP + + +Y+ ++ LN+D ++ GIP L
Sbjct: 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP--KYIERGIPTL-LL 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVDA 227
+ G VG L + L E +DA
Sbjct: 81 FKNGEVAATKVGALSKGQLKEFLDA 105
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A WC C+ +AP + + Y+ + + + L+VD ++ V IP
Sbjct: 24 LVDFWATWCGTCKMIAPVLEELAADYEGKADILKLDVDENP--STAAKYEVMSIPTLIVF 81
Query: 203 DREGNEEGNVVGRLPRQYLLENVD 226
++G VVG P++ L E +D
Sbjct: 82 -KDGQPVDKVVGFQPKENLAEVLD 104
>pdb|2LS5|A Chain A, Solution Structure Of A Putative Protein Disulfide
Isomerase From Bacteroides Thetaiotaomicron
Length = 159
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 117 DFGVSLKDLSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYR-VEQQYKDRVNFV 175
DF ++L D L + GK +L+F A WC VCR+ P + + + ++KD +F
Sbjct: 15 DFTITLTDGKQVTL----SSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFA 70
Query: 176 MLNVD 180
++ +D
Sbjct: 71 LIGID 75
>pdb|3P2A|A Chain A, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|B Chain B, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|C Chain C, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|D Chain D, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
Length = 148
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 125 LSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKW 184
++A A ++ L + P V++F+A WC CR AP + +V FV + NT+
Sbjct: 41 INATAETLDKLLQDDLPXVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKV---NTEA 97
Query: 185 EQELD-EFGVEGIPHFAFLDREGNEEGNVVGRLPR 218
E L F + IP L R G + G +P+
Sbjct: 98 EPALSTRFRIRSIPTIX-LYRNGKXIDXLNGAVPK 131
>pdb|3KH7|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Reduced Ccmg From Pseudomonas Aeruginosa
pdb|3KH9|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Oxidized Ccmg From Pseudomonas Aeruginosa
Length = 176
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 18/124 (14%)
Query: 134 QALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQ--YKDRVNFVMLNVDNTKWEQELD-- 189
+A GKP ++ + WC CR P++ R+ +Q +N+ N KW EL
Sbjct: 53 EADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQGVVIYGINYKDDNAAAIKWLNELHNP 112
Query: 190 --------------EFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGKASI 235
+ GV G P +D++G +VG + ++ E + L
Sbjct: 113 YLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQLLDE 172
Query: 236 PHAR 239
P AR
Sbjct: 173 PEAR 176
>pdb|2DML|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A6
Length = 130
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
++EFYA WC C+ L P+ + KD V +N D K + ++GV+G P
Sbjct: 39 LVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNAD--KHQSLGGQYGVQGFPTIKIF 96
Query: 203 DREGNE-EGNVVGRLPRQYLLENVDALAHGKAS 234
N+ E GR + + AL G +S
Sbjct: 97 GANKNKPEDYQGGRTGEAIVDAALSALRSGPSS 129
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A WC C+ +AP + + Y+ + + + L+VD ++ V IP
Sbjct: 23 LVDFWATWCGSCKMIAPVLEELAADYEGKADILKLDVDENP--STAAKYEVMSIPTLIVF 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVD 226
++G VVG P++ L E +D
Sbjct: 81 -KDGQPVDKVVGFQPKENLAEVLD 103
>pdb|2DJ2|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 120
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 119 GVSLKDLSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVML- 177
G S LS ++ + N ++EFYA WC C++LAP+ + ++ R + L
Sbjct: 4 GSSGVTLSLTKDNFDDVVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLA 63
Query: 178 NVDNTKWEQELDEFGVEGIPHFAFLDREG 206
VD T+ F V G P R+G
Sbjct: 64 KVDATEQTDLAKRFDVSGYPTLKIF-RKG 91
>pdb|2ALB|A Chain A, Nmr Structure Of The N-Terminal Domain A Of The
Glycoprotein Chaperone Erp57
Length = 113
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
++EF+A WC C+ LAP+ + K V + VD T +++GV G P
Sbjct: 25 LVEFFAPWCGHCKRLAPEYEAAATRLKGIVP--LAKVDCTANTNTCNKYGVSGYPTLKIF 82
Query: 203 DREGNEEGNVVG 214
R+G E G G
Sbjct: 83 -RDGEEAGAYDG 93
>pdb|2L4Q|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
pdb|2L59|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
Length = 116
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 136 LTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEG 195
L++ KP +++F+A WC C+ +AP + + + + L+VD + F V
Sbjct: 22 LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN--PETARNFQVVS 79
Query: 196 IPHFAFLDREGNEEGNVVGRLPRQYLL 222
IP L ++G +VG + LL
Sbjct: 80 IPTL-ILFKDGQPVKRIVGAKGKAALL 105
>pdb|2O7K|A Chain A, S. Aureus Thioredoxin
Length = 107
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A WC C+ +AP + + Y+ + + + L+VD ++ V IP
Sbjct: 24 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP--STAAKYEVMSIPTLIVF 81
Query: 203 DREGNEEGNVVGRLPRQYLLENVD 226
++G VVG P++ L E +D
Sbjct: 82 -KDGQPVDKVVGFQPKENLAEVLD 104
>pdb|3D21|A Chain A, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
pdb|3D21|B Chain B, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
Length = 139
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 134 QALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG- 192
+A +GK + F A WC C+++AP + + Y + F++++VD EL +F
Sbjct: 41 EASRDGKIVLANFSARWCGPCKQIAPYYIELSENYP-SLMFLVIDVD------ELSDFSA 93
Query: 193 ---VEGIPHFAFLDREGNEEGNVVG 214
++ P F FL R+G + +VG
Sbjct: 94 SWEIKATPTFFFL-RDGQQVDKLVG 117
>pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C
Length = 121
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 136 LTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEG 195
L++ KP +++F+A WC C+ +AP + + + + L+VD + F V
Sbjct: 27 LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN--PETARNFQVVS 84
Query: 196 IPHFAFLDREGNEEGNVVGRLPRQYLL 222
IP L ++G +VG + LL
Sbjct: 85 IPTL-ILFKDGQPVKRIVGAKGKAALL 110
>pdb|3S9F|A Chain A, The Structure Of Tryparedoxin I From Leishmania Major
Length = 165
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 138 NGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGV--EG 195
+GK F A WC CR P + +++ D NF ++ W++E D+F
Sbjct: 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILA---SWDEEEDDFNAYYAK 103
Query: 196 IPHFA--FLDREGNEEGNVVGRLPRQYLLENVDAL 228
+P + F +R N+V L ++Y +E++ L
Sbjct: 104 MPWLSIPFANR------NIVEALTKKYSVESIPTL 132
>pdb|2CVK|A Chain A, Crystal Structure Of Thermus Thermophilus Thioredoxin
Length = 110
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
+++ L +++F+A+WC CR +AP + + ++Y+ ++ L+VD + +
Sbjct: 12 FDETLGQHPLVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENP--KTAXRY 69
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLPRQ 219
V IP L ++G +VG P++
Sbjct: 70 RVXSIPT-VILFKDGQPVEVLVGAQPKR 96
>pdb|2YZU|A Chain A, Crystal Structure Of Oxidized Thioredoxin From Thermus
Thermophilus Hb8
Length = 109
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
+++ L +++F+A+WC CR +AP + + ++Y+ ++ L+VD + +
Sbjct: 11 FDETLGQHPLVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENP--KTAXRY 68
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLPRQ 219
V IP L ++G +VG P++
Sbjct: 69 RVXSIPT-VILFKDGQPVEVLVGAQPKR 95
>pdb|2PPT|A Chain A, Crystal Structure Of Thioredoxin-2
pdb|2PPT|B Chain B, Crystal Structure Of Thioredoxin-2
Length = 155
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Query: 141 PTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFA 200
P +++F+A WC CR++AP +V +D ++GIP F
Sbjct: 66 PLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLA--KIDTQAHPAVAGRHRIQGIPAF- 122
Query: 201 FLDREGNEEGNVVGRLPRQYLLENV 225
L +G E G P L+ V
Sbjct: 123 ILFHKGRELARAAGARPASELVGFV 147
>pdb|2PU9|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin F
pdb|2PVO|C Chain C, Crystal Srtucture Of The Ternary Complex Between
Thioredoxin F, Ferredoxin, And Ferredoxin: Thioredoxin
Reductase
Length = 111
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQEL-DEFGVEGIPH 198
KP VL+ + WC + +AP ++ ++Y D + L +D + + L E G+ +P
Sbjct: 25 KPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD---VIFLKLDCNQENKTLAKELGIRVVPT 81
Query: 199 FAFLDREGNEEGNVVGRLPRQYLLENVDA 227
F L +E + G V G LLE + A
Sbjct: 82 FKIL-KENSVVGEVTGA-KYDKLLEAIQA 108
>pdb|1XFL|A Chain A, Solution Structure Of Thioredoxin H1 From Arabidopsis
Thaliana
Length = 124
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
V++F A WC CR +AP + ++ N + L VD + + ++ ++ +P F FL
Sbjct: 42 VVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELKSVASDWAIQAMPTFMFL 98
Query: 203 DREGNEEGNVVG 214
+EG VVG
Sbjct: 99 -KEGKILDKVVG 109
>pdb|2DJ1|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 140
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR-VNFVMLNVDNTKWEQELDE 190
++ + + +LEFYA WC C++ AP+ ++ KD + +D T +
Sbjct: 27 FDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASK 86
Query: 191 FGVEGIPHFAFLDR 204
F V G P L +
Sbjct: 87 FDVSGYPTIKILKK 100
>pdb|3TCO|A Chain A, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|B Chain B, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|C Chain C, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
Length = 109
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
+++ + N K +++ +A+WC C P +V ++YK + F LNVD ++ D++
Sbjct: 14 FDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDEN--QKIADKY 71
Query: 192 GVEGIP 197
V IP
Sbjct: 72 SVLNIP 77
>pdb|2B5X|A Chain A, Solution Structure Of A Thioredoxin-Like Protein In The
Reduced Form
pdb|2B5Y|A Chain A, Solution Structure Of A Thioredoxin-Like Protein In The
Oxidized Form
Length = 148
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 134 QALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELD 189
+ L KPT++ F++ C +C+E P V +Y+D++N V +++ + E +LD
Sbjct: 24 EQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRS--EDDLD 77
>pdb|3UL3|B Chain B, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
pdb|3UL3|A Chain A, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
Length = 128
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
VL F+A WC+ C + ++ ++++ Y R+ +L VD K E +F V+ +P L
Sbjct: 46 VLYFFAKWCQACTMQSTEMDKLQKYYGKRI--YLLKVDLDKNESLARKFSVKSLPTIILL 103
>pdb|2DJJ|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
pdb|2KP1|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
Length = 121
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRV-----EQQYKDRVNFVMLNVDNT 182
E L + K ++EFYA WC C+ LAP + + ++KDRV V+ VD T
Sbjct: 19 EIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRV--VIAKVDAT 71
>pdb|3ZZX|A Chain A, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
pdb|3ZZX|B Chain B, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
Length = 105
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPH 198
K V++FYA WC C+ +AP + + Q D V L VD + E + + +P
Sbjct: 20 NKLVVIDFYATWCGPCKMIAPKLEELSQSMSD---VVFLKVDVDECEDIAQDNQIACMPT 76
Query: 199 FAFL 202
F F+
Sbjct: 77 FLFM 80
>pdb|3IDV|A Chain A, Crystal Structure Of The A0a Fragment Of Erp72
Length = 241
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFV-MLNVDNTKWEQELDE 190
++ + + +LEFYA WC C++ AP+ ++ KD+ + + +D T
Sbjct: 25 FDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASR 84
Query: 191 FGVEGIPHFAFLDR 204
F V G P L +
Sbjct: 85 FDVSGYPTIKILKK 98
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVML-NVDNTKWEQELDE 190
+++ + + ++EFYA WC C++LAP+ + ++ R + L VD T
Sbjct: 140 FDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKR 199
Query: 191 FGVEGIPHFAFLDREG 206
F V G P R+G
Sbjct: 200 FDVSGYPTLKIF-RKG 214
>pdb|3IA1|A Chain A, Crystal Structure Of Thio-Disulfide Isomerase From Thermus
Thermophilus
pdb|3IA1|B Chain B, Crystal Structure Of Thio-Disulfide Isomerase From Thermus
Thermophilus
Length = 154
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 23/106 (21%)
Query: 137 TNGKPTVLEFYADWCEVCRELAPDVYRVEQQ----------------------YKDRVNF 174
T KP V+ F+A WC VC+ P ++RV ++ K F
Sbjct: 28 TVSKPAVIVFWASWCTVCKAEFPGLHRVAEETGVPFYVISREPRDTREVVLEYMKTYPRF 87
Query: 175 V-MLNVDNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQ 219
+ +L D + + F V G P +DREG GR R+
Sbjct: 88 IPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGRE 133
>pdb|3D22|A Chain A, Crystal Structure Of A Poplar Thioredoxin H Mutant,
Pttrxh4c61s
Length = 139
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 134 QALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG- 192
+A +GK + F A WC R++AP + + Y + F++++VD EL +F
Sbjct: 41 EASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVD------ELSDFSA 93
Query: 193 ---VEGIPHFAFLDREGNEEGNVVG 214
++ P F FL R+G + +VG
Sbjct: 94 SWEIKATPTFFFL-RDGQQVDKLVG 117
>pdb|1LU4|A Chain A, 1.1 Angstrom Resolution Crystal Structure Of A Secreted
Mycobacterium Tuberculosis Disulfide Oxidoreductase
Homologous To E. Coli Dsbe: Implications For Functions
Length = 136
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 115 RLDFGVSLKDLSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRV 164
RL F + LS A P++ A GKP VL F+ WC C AP + +V
Sbjct: 4 RLQF--TATTLSGA--PFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQV 49
>pdb|3FKF|A Chain A, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|B Chain B, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|C Chain C, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|D Chain D, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
Length = 148
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNF----VMLNVDNTKWEQEL--DEFGVEGI 196
+L F+A WC+ E ++ R+ ++YK NF + L++D WE + D + +
Sbjct: 37 LLNFWASWCDPQPEANAELKRLNKEYKKNKNFAXLGISLDIDREAWETAIKKDTLSWDQV 96
Query: 197 PHFAFLDREGNEEGNVVGRLPRQYLL 222
F L E ++ ++ LP LL
Sbjct: 97 CDFTGLSSETAKQYAIL-TLPTNILL 121
>pdb|1OAZ|A Chain A, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
pdb|1OAZ|B Chain B, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
Length = 123
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 143 VLEFYADWCEV--------------CRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQEL 188
+++F+A+WC C+ +AP + + +Y+ ++ LN+D
Sbjct: 25 LVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP- 83
Query: 189 DEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDA 227
++G+ GIP L + G VG L + L E +DA
Sbjct: 84 -KYGIRGIPTL-LLFKNGEVAATKVGALSKGQLKEFLDA 120
>pdb|2O89|A Chain A, S. Aureus Thioredoxin P31tC32S MUTANT
Length = 107
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A WC + +AP + + Y+ + + + L+VD ++ V IP
Sbjct: 24 LVDFWATWCGTSKMIAPVLEELAADYEGKADILKLDVDENP--STAAKYEVMSIPTLIVF 81
Query: 203 DREGNEEGNVVGRLPRQYLLENVD 226
++G VVG P++ L E +D
Sbjct: 82 -KDGQPVDKVVGFQPKENLAEVLD 104
>pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3NOF|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3O6T|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|C Chain C, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|D Chain D, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
Length = 118
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 136 LTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEG 195
L++ KP +++F+A WC + +AP + + + + L+VD + F V
Sbjct: 24 LSSNKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTN--PETARNFQVVS 81
Query: 196 IPHFAFLDREGNEEGNVVGRLPRQYLL 222
IP L ++G +VG + LL
Sbjct: 82 IPTL-ILFKDGQPVKRIVGAKGKAALL 107
>pdb|3ED3|A Chain A, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
pdb|3ED3|B Chain B, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
Length = 298
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 132 YEQALTNGKPTVL-EFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDE 190
+++A+ N T L EFYA WC C++L+ + ++ V +N D K + +
Sbjct: 27 FDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAK 86
Query: 191 FGVEGIP 197
+ V G P
Sbjct: 87 YDVNGFP 93
>pdb|2L57|A Chain A, Solution Structure Of An Uncharacterized Thioredoin-Like
Protein From Clostridium Perfringens
Length = 126
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPH 198
G PT++ F D C C E+ ++ V ++ + + N ++ K ++ +P
Sbjct: 26 GIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPT 85
Query: 199 FAFLDREGNE 208
FLD+EGN+
Sbjct: 86 TVFLDKEGNK 95
>pdb|2K8V|A Chain A, Solution Structure Of Oxidised Erp18
Length = 157
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG 192
++A +G P ++ + WC C+ L P + + NFVM+N+++ + E + ++F
Sbjct: 33 KEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEE-EPKDEDFS 91
Query: 193 VEG--IPHFAFLDREG-------NEEGN 211
+G IP FLD G NE GN
Sbjct: 92 PDGGYIPRILFLDPSGKVHPEIINENGN 119
>pdb|1O81|A Chain A, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1O81|B Chain B, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1OC9|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNF-VMLNVDNTKWEQELDEFG--VEG 195
GK F A WC CR P + + + ++ NF VML W++ ++F
Sbjct: 31 GKTVFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVML----ISWDESAEDFKDYYAK 86
Query: 196 IPHFA--FLDREGNE 208
+P A F DR+G E
Sbjct: 87 MPWLALPFEDRKGME 101
>pdb|1SEN|A Chain A, Endoplasmic Reticulum Protein Rp19 O95881
Length = 164
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG 192
++A +G P ++ + WC C+ L P + + NFVM+N+++ + E + ++F
Sbjct: 40 KEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEE-EPKDEDFS 98
Query: 193 VEG--IPHFAFLDREG-------NEEGN 211
+G IP FLD G NE GN
Sbjct: 99 PDGGYIPRILFLDPSGKVHPEIINENGN 126
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
++EF+A WC + LAP+ + K V + VD T +++GV G P
Sbjct: 25 LVEFFAPWCGHAKRLAPEYEAAATRLKGIV--PLAKVDCTANTNTCNKYGVSGYPTLKIF 82
Query: 203 DREGNEEGNVVGRLPRQYLLENVDALAHGKASIP 236
R+G E G G ++ ++ A G AS+P
Sbjct: 83 -RDGEEAGAYDGPRTADGIVSHLKKQA-GPASVP 114
Score = 33.9 bits (76), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNT 182
K ++EFYA WC C+ L P + ++ N V+ +D T
Sbjct: 371 KDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDAT 413
>pdb|1O6J|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
pdb|1O6J|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
Length = 150
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNF-VMLNVDNTKWEQELDEFG--VEG 195
GK F A WC CR P + + + ++ NF VML W++ ++F
Sbjct: 29 GKTVFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVML----ISWDESAEDFKDYYAK 84
Query: 196 IPHFA--FLDREGNE 208
+P A F DR+G E
Sbjct: 85 MPWLALPFEDRKGME 99
>pdb|1FG4|A Chain A, Structure Of Tryparedoxin Ii
pdb|1FG4|B Chain B, Structure Of Tryparedoxin Ii
Length = 149
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNF-VMLNVDNTKWEQELDEFG--VEG 195
GK F A WC CR P + + + ++ NF VML W++ ++F
Sbjct: 28 GKTVFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVML----ISWDESAEDFKDYYAK 83
Query: 196 IPHFA--FLDREGNE 208
+P A F DR+G E
Sbjct: 84 MPWLALPFEDRKGME 98
>pdb|3VFI|A Chain A, Crystal Structure Of A Metagenomic Thioredoxin
Length = 104
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 141 PTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFA 200
P ++ F WC+ C+++ P + Q + + F ++ ++ E+ + E + +P A
Sbjct: 19 PIIIMFTGSWCQPCKKMKPTFEEMASQMEGDIRFAYMDAEDA--EKTMAELNIRTLPSLA 76
Query: 201 -FLD 203
F+D
Sbjct: 77 LFVD 80
>pdb|1EP7|A Chain A, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1EP7|B Chain B, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1TOF|A Chain A, Thioredoxin H (Oxidized Form), Nmr, 23 Structures
Length = 112
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHF 199
KP V++F A WC C+ +AP + Y +V F L VD + G+ +P F
Sbjct: 25 KPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIF--LKVDVDAVAAVAEAAGITAMPTF 82
Query: 200 AFLDREGNEEGNVVG 214
+ ++G + ++VG
Sbjct: 83 -HVYKDGVKADDLVG 96
>pdb|3DIE|A Chain A, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
pdb|3DIE|B Chain B, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
Length = 106
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL 202
+++F+A C C+ +AP + + Y+ + + + L+VD ++ V IP
Sbjct: 23 LVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENP--STAAKYEVMSIPTLIVF 80
Query: 203 DREGNEEGNVVGRLPRQYLLENVD 226
++G VVG P++ L E +D
Sbjct: 81 -KDGQPVDKVVGFQPKENLAEVLD 103
>pdb|1EP8|A Chain A, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
pdb|1EP8|B Chain B, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
Length = 112
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHF 199
KP V+ F A WC C+ +AP + Y +V F L VD + G+ +P F
Sbjct: 25 KPIVVAFTATWCGPCKMIAPLFETLSNDYAGKVIF--LKVDVDAVAAVAEAAGITAMPTF 82
Query: 200 AFLDREGNEEGNVVG 214
+ ++G + ++VG
Sbjct: 83 -HVYKDGVKADDLVG 96
>pdb|2DMM|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Human Protein Disulfide-Isomerase A3
Length = 142
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNT 182
K ++EFYA WC C+ L P + ++ N V+ +D T
Sbjct: 46 KDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDAT 88
>pdb|1OC9|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNF-VMLNVDNTKWEQELDEFG--VEG 195
GK F A WC CR P + + + + NF VML W++ ++F
Sbjct: 31 GKTVFFYFSASWCPPCRAFTPQLIDFYKAHAESKNFEVML----ISWDESAEDFKDYYAK 86
Query: 196 IPHFA--FLDREGNE 208
+P A F DR+G E
Sbjct: 87 MPWLALPFEDRKGME 101
>pdb|1X5D|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase A6
Length = 133
Score = 33.9 bits (76), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 143 VLEFYADWCEVCRELAPD----VYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPH 198
++EFYA WC C+ L P+ V++Q K +V VD T + +G+ G P
Sbjct: 29 MVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAA--VDATVNQVLASRYGIRGFPT 86
Query: 199 FAFLDR 204
+
Sbjct: 87 IKIFQK 92
>pdb|2H1B|A Chain A, Resa E80q
pdb|2H1B|B Chain B, Resa E80q
pdb|2H1B|C Chain C, Resa E80q
pdb|2H1B|D Chain D, Resa E80q
Length = 143
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR-VNFVMLNVDNTKW------------- 184
GK L F+ WCE C++ P + + +K + V V +NV +K
Sbjct: 26 GKGVFLNFWGTWCEPCKKQFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNF 85
Query: 185 -------EQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGKAS 234
Q LD + V +P ++ EG V G + + + ++ + G+ S
Sbjct: 86 PVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGETS 142
>pdb|3APS|A Chain A, Crystal Structure Of Trx4 Domain Of Erdj5
pdb|3APS|B Chain B, Crystal Structure Of Trx4 Domain Of Erdj5
Length = 122
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG 192
E+ L V++FYA WC C+ AP+ + + K +V VD + Q + G
Sbjct: 15 EKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVR--AGKVDCQAYPQTCQKAG 72
Query: 193 VEGIPHFAFLDRE 205
++ P E
Sbjct: 73 IKAYPSVKLYQYE 85
>pdb|1SYR|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|B Chain B, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|C Chain C, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|D Chain D, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|E Chain E, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|F Chain F, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|G Chain G, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|H Chain H, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|I Chain I, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|J Chain J, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|K Chain K, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|L Chain L, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
Length = 112
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 132 YEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVD 180
++ ++ + +++F+A+WC C+ +AP + Y V F+ ++VD
Sbjct: 19 FDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMV-FIKVDVD 66
>pdb|1ST9|A Chain A, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1ST9|B Chain B, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1SU9|A Chain A, Reduced Structure Of The Soluble Domain Of Resa
pdb|1SU9|B Chain B, Reduced Structure Of The Soluble Domain Of Resa
pdb|2H1D|A Chain A, Resa Ph 9.25
pdb|2H1D|B Chain B, Resa Ph 9.25
Length = 143
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR-VNFVMLNVDNTKW------------- 184
GK L F+ WCE C++ P + + +K + V V +NV +K
Sbjct: 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNF 85
Query: 185 -------EQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGKAS 234
Q LD + V +P ++ EG V G + + + ++ + G+ S
Sbjct: 86 PVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGETS 142
>pdb|3C73|A Chain A, Structure Of Cehc Variant Resa
pdb|3C73|B Chain B, Structure Of Cehc Variant Resa
Length = 140
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR-VNFVMLNVDNTKW------------- 184
GK L F+ WCE C++ P + + +K + V V +NV +K
Sbjct: 23 GKGVFLNFWGTWCEHCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNF 82
Query: 185 -------EQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGKAS 234
Q LD + V +P ++ EG V G + + + ++ + G+ S
Sbjct: 83 PVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGETS 139
>pdb|1UVZ|A Chain A, Structure Of Human Thioredoxin 2
pdb|1UVZ|B Chain B, Structure Of Human Thioredoxin 2
pdb|1UVZ|C Chain C, Structure Of Human Thioredoxin 2
pdb|1UVZ|D Chain D, Structure Of Human Thioredoxin 2
pdb|1UVZ|E Chain E, Structure Of Human Thioredoxin 2
pdb|1UVZ|F Chain F, Structure Of Human Thioredoxin 2
pdb|1W4V|A Chain A, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|B Chain B, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|C Chain C, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|D Chain D, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|E Chain E, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|F Chain F, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W89|A Chain A, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|B Chain B, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|C Chain C, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|D Chain D, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|E Chain E, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|F Chain F, Structure Of The Reduced Form Of Human Thioredoxin 2
Length = 119
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 28/49 (57%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDN 181
++ + + P V++F+A WC C+ L P + ++ + +V +++D+
Sbjct: 25 DRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDD 73
>pdb|3K8N|A Chain A, Crystal Structure Of E. Coli Ccmg
Length = 185
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 136 LTNGKPTVLEFYADWCEVCR 155
LT GKP +L +A WC CR
Sbjct: 65 LTQGKPVLLNVWATWCPTCR 84
>pdb|3ERW|A Chain A, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|B Chain B, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|C Chain C, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|D Chain D, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|E Chain E, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|F Chain F, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|G Chain G, Crystal Structure Of Stoa From Bacillus Subtilis
Length = 145
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQY-KDRVNFVMLNVDNTKWEQELDE 190
G+ T+L F+ WC C++ P + D V V +N+ N++ Q++ E
Sbjct: 34 GQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVE 86
>pdb|3HZ8|A Chain A, Crystal Structure Of The Oxidized T176v Dsba1 Mutant
Length = 193
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 127 AAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQ 186
A +P +QA GK VLEF+ +C C L P + + + +KD + L ++ W++
Sbjct: 15 ANPIPQQQA---GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDD---MYLRTEHVVWQK 68
Query: 187 EL 188
E+
Sbjct: 69 EM 70
>pdb|3DVW|A Chain A, Crystal Structure Of Reduced Dsba1 From Neisseria
Meningitidis
Length = 193
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 127 AAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQ 186
A +P +QA GK VLEF+ +C C L P + + + +KD + L ++ W++
Sbjct: 15 ANPIPQQQA---GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDD---MYLRTEHVVWQK 68
Query: 187 EL 188
E+
Sbjct: 69 EM 70
>pdb|2B1K|A Chain A, Crystal Structure Of E. Coli Ccmg Protein
Length = 168
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 136 LTNGKPTVLEFYADWCEVCR 155
LT GKP +L +A WC CR
Sbjct: 48 LTQGKPVLLNVWATWCPTCR 67
>pdb|2G0F|A Chain A, Crystal Structure Of P144a Mutant Of E.Coli Ccmg Protein
Length = 168
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 136 LTNGKPTVLEFYADWCEVCR 155
LT GKP +L +A WC CR
Sbjct: 48 LTQGKPVLLNVWATWCPTCR 67
>pdb|2KUC|A Chain A, Solution Structure Of A Putative Disulphide-Isomerase From
Bacteroides Thetaiotaomicron
Length = 130
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 119 GVSLKDLSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYR--VEQQYKDRVNFVM 176
G++ ++LS ++A K ++ + WC C+ L+ V++ + Y +R +FV
Sbjct: 8 GIAFRELSFPE-ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVN 65
Query: 177 LNVDNTKWEQ-EL-DEFGVEGIPHFAFLDREGNEEGNVVGRL 216
L +D K E EL ++GV P F+ N G VV RL
Sbjct: 66 LKMDMEKGEGVELRKKYGVHAYPTLLFI----NSSGEVVYRL 103
>pdb|3A3T|A Chain A, The Oxidoreductase Nmdsba1 From N. Meningitidis
pdb|3A3T|B Chain B, The Oxidoreductase Nmdsba1 From N. Meningitidis
pdb|3A3T|C Chain C, The Oxidoreductase Nmdsba1 From N. Meningitidis
pdb|3A3T|D Chain D, The Oxidoreductase Nmdsba1 From N. Meningitidis
pdb|3A3T|E Chain E, The Oxidoreductase Nmdsba1 From N. Meningitidis
pdb|3A3T|F Chain F, The Oxidoreductase Nmdsba1 From N. Meningitidis
Length = 210
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 130 LPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQEL 188
+P +QA GK VLEF+ +C C L P + + + +KD + L ++ W++E+
Sbjct: 35 IPQQQA---GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDD---MYLRTEHVVWQKEM 87
>pdb|2B1L|A Chain A, Crystal Structure Of N-Terminal 57 Residue Deletion Mutant
Of E. Coli Ccmg Protein(Residues 58-185)
pdb|2B1L|B Chain B, Crystal Structure Of N-Terminal 57 Residue Deletion Mutant
Of E. Coli Ccmg Protein(Residues 58-185)
Length = 129
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 136 LTNGKPTVLEFYADWCEVCR 155
LT GKP +L +A WC CR
Sbjct: 9 LTQGKPVLLNVWATWCPTCR 28
>pdb|3UVT|A Chain A, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|B Chain B, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|C Chain C, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|D Chain D, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|E Chain E, Crystal Structure Of The Third Catalytic Domain Of Erp46
Length = 111
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 142 TVLEFYADWCEVCRELAPDVYRV-EQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIP 197
T ++FYA WC C+ LAP + ++++ + VD T ++ V G P
Sbjct: 24 TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYP 80
>pdb|2DIZ|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Human Thioredoxin Domain-Containing Protein 5
Length = 117
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 142 TVLEFYADWCEVCRELAPDVYRV-EQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIP 197
T ++FYA WC C+ LAP + ++++ + VD T ++ V G P
Sbjct: 26 TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYP 82
>pdb|2B5E|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
pdb|3BOA|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
Length = 504
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 145 EFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIP 197
EF+A WC C+ +AP+ + + ++ N + +D T+ + E + G P
Sbjct: 37 EFFAPWCGHCKNMAPEYVKAAETLVEK-NITLAQIDCTENQDLCMEHNIPGFP 88
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVML-NVDNTKWEQELDEFGVEGIP 197
K ++ +YA WC C+ LAP + Y + + V++ +D+T E ++ +EG P
Sbjct: 377 KDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHT--ENDVRGVVIEGYP 433
>pdb|1O73|A Chain A, Tryparedoxin From Trypanosoma Brucei
Length = 144
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 27/113 (23%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQ-----------------------YKDRVNFV 175
GK L F A WC CR P + ++ Y ++ ++
Sbjct: 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWL 87
Query: 176 MLNVDNTKWEQELDE-FGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDA 227
L D EL + FGVE IP ++ + G ++G R ++E+ D
Sbjct: 88 ALPFDQRSTVSELGKTFGVESIPTLITINA---DTGAIIGTQARTRVIEDPDG 137
>pdb|3GL3|A Chain A, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|B Chain B, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|C Chain C, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|D Chain D, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
Length = 152
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 138 NGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR-VNFVMLNVD 180
G L+F+A WC CR+ P + + +YK + V +N+D
Sbjct: 27 TGSVVYLDFWASWCGPCRQSFPWXNQXQAKYKAKGFQVVAVNLD 70
>pdb|2R2J|A Chain A, Crystal Structure Of Human Erp44
Length = 382
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAP------DVYRVEQQYKDRVNFVMLNVD 180
++ L N ++ FYADWC + L P DV + E +++V F ++ D
Sbjct: 16 DEILNNADVALVNFYADWCRFSQXLHPIFEEASDVIKEEFPNENQVVFARVDCD 69
>pdb|1OKD|A Chain A, Nmr-Structure Of Tryparedoxin 1
Length = 154
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
GK F A WC CR P + ++ + NF V W++E D F
Sbjct: 28 GKLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNF---EVVFCTWDEEEDGF 77
>pdb|1EWX|A Chain A, Crystal Structure Of Native Tryparedoxin I From Crithidia
Fasciculata
Length = 146
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
GK F A WC CR P + ++ + NF V W++E D F
Sbjct: 28 GKLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNF---EVVFCTWDEEEDGF 77
>pdb|1QK8|A Chain A, Tryparedoxin-I From Crithidia Fasciculata
pdb|1O7U|A Chain A, Radiation Induced Tryparedoxin-I
pdb|1O85|A Chain A, Radiation-Reduced Tryparedoxin-I
pdb|1O8W|A Chain A, Radiation-Reduced Tryparedoxin-I
Length = 146
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
GK F A WC CR P + ++ + NF V W++E D F
Sbjct: 28 GKLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNF---EVVFCTWDEEEDGF 77
>pdb|3FK8|A Chain A, The Crystal Structure Of Disulphide Isomerase From Xylella
Fastidiosa Temecula1
Length = 133
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELD---EFG---V 193
KPT+L F A+WC CR L + + +F ++ +D +++ L+ +G
Sbjct: 30 KPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQ 89
Query: 194 EGIPHFAFLDREG 206
+GIP ++ +G
Sbjct: 90 DGIPAVVVVNSDG 102
>pdb|1EZK|A Chain A, Crystal Structure Of Recombinant Tryparedoxin I
Length = 153
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEF 191
GK F A WC CR P + ++ + NF V W++E D F
Sbjct: 27 GKLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNF---EVVFCTWDEEEDGF 76
>pdb|3GNJ|A Chain A, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|B Chain B, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|C Chain C, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|D Chain D, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
Length = 111
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 132 YEQALTN-GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDE 190
+EQ + + GK ++ F C VC+++ P + + Y++ F ++V+ K
Sbjct: 14 FEQLIYDEGKACLVXFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK--TLFQR 71
Query: 191 FGVEGIPHFAFLDREGNEEGNVVG 214
F ++G+P + ++G +G G
Sbjct: 72 FSLKGVPQILYF-KDGEYKGKXAG 94
>pdb|3UJ1|A Chain A, Crystal Structure Of The Third Thioredoxin Domain Of Human
Erp46
Length = 110
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 142 TVLEFYADWCEVCRELAPDVYRV-EQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIP 197
T ++FYA WC C+ LAP + ++++ + VD T ++ V G P
Sbjct: 19 TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYP 75
>pdb|3D6I|A Chain A, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
pdb|3D6I|B Chain B, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
Length = 112
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 140 KPTVLEFYADWCEVCRELAPDVYRVEQQ-YKDRVNFVMLNVDNTKWEQELDEFGVEGIPH 198
K VL F+ W E C+ L + + V+F+ ++ D EL F + +P+
Sbjct: 22 KLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISEL--FEISAVPY 79
Query: 199 FAFLDREGNEEGNVVGRLPRQY--LLEN 224
F + + G + G P++Y LLE+
Sbjct: 80 FIIIHK-GTILKELSGADPKEYVSLLED 106
>pdb|3HDC|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 158
Score = 30.8 bits (68), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTK 183
GK ++ F+A WC CR+ P R+ + + + + V+L V+ K
Sbjct: 41 GKIVLVNFWASWCPYCRDEXPSXDRLVKSFP-KGDLVVLAVNVEK 84
>pdb|2F9S|A Chain A, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|2F9S|B Chain B, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
Length = 151
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR-VNFVMLNVDNTK 183
GK L F+ WCE C++ P + +K + V V +NV +K
Sbjct: 26 GKGVFLNFWGTWCEPCKKEFPYXANQYKHFKSQGVEIVAVNVGESK 71
>pdb|2H30|A Chain A, Crystal Structure Of The N-Terminal Domain Of Pilb From
Neisseria Gonorrhoeae
Length = 164
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 131 PYEQALTNGKPTVLEFYADWCEVC 154
P L KPT+++F+A WC +C
Sbjct: 30 PASVYLKKDKPTLIKFWASWCPLC 53
>pdb|2JZR|A Chain A, Solution Structure Of The Oxidized Form (Cys67-Cys70) Of
The N-Terminal Domain Of Pilb From N. Meningitidis.
pdb|2JZS|A Chain A, Solution Structure Of The Reduced Form Of The N-Terminal
Domain Of Pilb From N. Meningitidis.
pdb|2K9F|A Chain A, Structural Features Of The Complex Between The Dsbd N-
Terminal And The Pilb N-Terminal Domains From Neisseria
Meningitidis
Length = 144
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 131 PYEQALTNGKPTVLEFYADWCEVC 154
P L KPT+++F+A WC +C
Sbjct: 16 PASVYLKKDKPTLIKFWASWCPLC 39
>pdb|2FY6|A Chain A, Structure Of The N-Terminal Domain Of Neisseria
Meningitidis Pilb
Length = 143
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 131 PYEQALTNGKPTVLEFYADWCEVC 154
P L KPT+++F+A WC +C
Sbjct: 15 PASVYLKKDKPTLIKFWASWCPLC 38
>pdb|3C71|A Chain A, Struture Of A Resa Variant With A Dsba-Like Active Site
Motif (Cphc)
Length = 143
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR-VNFVMLNVDNTKW------------- 184
GK L F+ WC C++ P + + +K + V V +NV +K
Sbjct: 26 GKGVFLNFWGTWCPHCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNF 85
Query: 185 -------EQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGKAS 234
Q LD + V +P ++ EG V G + + + ++ + G+ S
Sbjct: 86 PVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGETS 142
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5
pdb|3APQ|B Chain B, Crystal Structure Of J-Trx1 Fragment Of Erdj5
Length = 210
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 113 FTRLDFGVSLKDLSAAALP---YEQALTNGKPTVLEFYADWCEVCRELAP 159
+ R DFG+ D L ++ A+ +G+ + FY+ C C +LAP
Sbjct: 85 YYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAP 134
>pdb|1X5E|A Chain A, The Solution Structure Of The Thioredoxin-Like Domain Of
Human Thioredoxin-Related Transmembrane Protein
Length = 126
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 143 VLEFYADWCEVCRELAPDVYRVEQQYKD-RVNFVMLNV 179
++EFYA WC C+ L P+ + +D VN ++V
Sbjct: 26 MIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDV 63
>pdb|3GGH|A Chain A, Donor Strand Complemented Faeg Of F4ad Fimbriae
pdb|3GGH|B Chain B, Donor Strand Complemented Faeg Of F4ad Fimbriae
Length = 275
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 192 GVEGIPHFAFLDREG 206
GV+GIPH AF D EG
Sbjct: 66 GVDGIPHIAFTDYEG 80
>pdb|3GEW|D Chain D, Faee-Faeg Chaperone-Major Pilin Complex Of F4 Ad Fimbriae
pdb|3GEW|A Chain A, Faee-Faeg Chaperone-Major Pilin Complex Of F4 Ad Fimbriae
Length = 253
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 192 GVEGIPHFAFLDREG 206
GV+GIPH AF D EG
Sbjct: 65 GVDGIPHIAFTDYEG 79
>pdb|3GEA|A Chain A, Donor Strand Complemented Faeg Monomer Of F4 Variant Ad
pdb|3GEA|B Chain B, Donor Strand Complemented Faeg Monomer Of F4 Variant Ad
Length = 274
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 192 GVEGIPHFAFLDREG 206
GV+GIPH AF D EG
Sbjct: 65 GVDGIPHIAFTDYEG 79
>pdb|2J6R|A Chain A, Faeg From F4ac Etec Strain Gis26, Produced In Tobacco
Plant Chloroplast
Length = 266
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 192 GVEGIPHFAFLDREG 206
GV+GIPH AF D EG
Sbjct: 80 GVDGIPHIAFTDYEG 94
>pdb|2J6G|A Chain A, Faeg From F4ac Etec Strain 5_95, Produced In Tobacco Plant
Chloroplast
Length = 266
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 192 GVEGIPHFAFLDREG 206
GV+GIPH AF D EG
Sbjct: 80 GVDGIPHIAFTDYEG 94
>pdb|2LRN|A Chain A, Solution Structure Of A Thiol:disulfide Interchange
Protein From Bacteroides Sp.
pdb|4GRF|A Chain A, Crystal Structure Of Thioredoxin Domain Of Thiol-Disulfide
Oxidoreductase Bvu-2223 (Target Efi-501010) From
Bacteroides Vulgatus
Length = 152
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 31/113 (27%)
Query: 119 GVSLKDLSAAALPYEQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLN 178
G+ LK S + ++ GK +++F+ C CR+ P + + +KD+ F +
Sbjct: 14 GIDLKGNSVSLNDFK-----GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK-GFTIYG 67
Query: 179 V---------------DNTKWEQ----------ELDEFGVEGIPHFAFLDREG 206
V D + W Q L+ + + G PH +D EG
Sbjct: 68 VSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEG 120
>pdb|3GFU|D Chain D, Faee-Faeg Chaperone-Major Pilin Complex Of F4 Ac 595
Fimbriae
pdb|3GFU|B Chain B, Faee-Faeg Chaperone-Major Pilin Complex Of F4 Ac 595
Fimbriae
Length = 251
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 192 GVEGIPHFAFLDREG 206
GV+GIPH AF D EG
Sbjct: 65 GVDGIPHIAFTDYEG 79
>pdb|2J6R|B Chain B, Faeg From F4ac Etec Strain Gis26, Produced In Tobacco
Plant Chloroplast
Length = 266
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 192 GVEGIPHFAFLDREG 206
GV+GIPH AF D EG
Sbjct: 80 GVDGIPHIAFTDYEG 94
>pdb|3HLR|A Chain A, Donor Strand Complemented Faeg Of F4ad Fimbriae
Length = 276
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 192 GVEGIPHFAFLDREG 206
GV+GIPH AF D EG
Sbjct: 57 GVDGIPHIAFTDYEG 71
>pdb|3KCM|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|B Chain B, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|C Chain C, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|D Chain D, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|E Chain E, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|F Chain F, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 154
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRV 164
G+ ++ F+A WC CRE P R+
Sbjct: 28 GQVVIVNFWATWCPPCREEIPSXXRL 53
>pdb|2H19|A Chain A, Crystal Structure Of Resa Cys77ala Variant
pdb|2H19|B Chain B, Crystal Structure Of Resa Cys77ala Variant
Length = 143
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR-VNFVMLNVDNTKW------------- 184
GK L F+ WCE ++ P + + +K + V V +NV +K
Sbjct: 26 GKGVFLNFWGTWCEPAKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNF 85
Query: 185 -------EQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGKAS 234
Q LD + V +P ++ EG V G + + + ++ + G+ S
Sbjct: 86 PVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGETS 142
>pdb|2H1A|A Chain A, Resa C74a Variant
pdb|2H1A|B Chain B, Resa C74a Variant
Length = 143
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 139 GKPTVLEFYADWCEVCRELAPDVYRVEQQYKDR-VNFVMLNVDNTKW------------- 184
GK L F+ W E C++ P + + +K + V V +NV +K
Sbjct: 26 GKGVFLNFWGTWAEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNF 85
Query: 185 -------EQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGKAS 234
Q LD + V +P ++ EG V G + + + ++ + G+ S
Sbjct: 86 PVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGETS 142
>pdb|2JU5|A Chain A, Dsbh Oxidoreductase
Length = 154
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
Query: 133 EQALTNGKPTVLEFY-ADWCEVCRELAPDVYRV-EQQYKDRVNFVMLNVD---------- 180
E + + KP L F +DWC C ++ + + E ++ V+ M+ VD
Sbjct: 41 EHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEE 100
Query: 181 NTKWEQELD-EFGVEGIPHFAFLDREGNE 208
+ QEL ++ V G P F+D EG +
Sbjct: 101 QRQKNQELKAQYKVTGFPELVFIDAEGKQ 129
>pdb|1Z5Y|E Chain E, Crystal Structure Of The Disulfide-linked Complex Between
The N-terminal Domain Of The Electron Transfer Catalyst
Dsbd And The Cytochrome C Biogenesis Protein Ccmg
Length = 149
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 136 LTNGKPTVLEFYADWCEVCR 155
LT GKP +L +A WC R
Sbjct: 23 LTQGKPVLLNVWATWCPTSR 42
>pdb|3QOU|A Chain A, Crystal Structure Of E. Coli Ybbn
Length = 287
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 133 EQALTNGKPTVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFG 192
EQ++T P + F+++ + C +L P + + QY + F++ +D + +FG
Sbjct: 22 EQSMTT--PVLFYFWSERSQHCLQLTPILESLAAQYNGQ--FILAKLDCDAEQMIAAQFG 77
Query: 193 VEGIP 197
+ IP
Sbjct: 78 LRAIP 82
>pdb|3G7F|H Chain H, Crystal Structure Of Blastochloris Viridis Heterodimer
Mutant Reaction Center
pdb|3T6D|H Chain H, Crystal Structure Of The Reaction Centre From
Blastochloris Viridis Strain Dsm 133 (Atcc 19567)
Substrain-08
Length = 258
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGKASIPHARIVGQYSSAENRK 251
G EG P L GN + VG E VDA GKA I R+ +S AE
Sbjct: 95 GFEGAP----LQPTGNPLVDAVGPASYAERAEVVDATVDGKAKIVPLRVATDFSIAEGD- 149
Query: 252 VHQVVDPRS 260
VDPR
Sbjct: 150 ----VDPRG 154
>pdb|2PRC|H Chain H, Photosynthetic Reaction Center From Rhodopseudomonas
Viridis (Ubiquinone-2 Complex)
pdb|3PRC|H Chain H, Photosynthetic Reaction Center From Rhodopseudomonas
Viridis (Qb- Depleted)
pdb|5PRC|H Chain H, Photosynthetic Reaction Center From Rhodopseudomonas
Viridis (Atrazine Complex)
pdb|6PRC|H Chain H, Photosynthetic Reaction Center From Rhodopseudomonas
Viridis (Dg- 420314 (Triazine) Complex)
pdb|7PRC|H Chain H, Photosynthetic Reaction Center From Rhodopseudomonas
Viridis (Dg- 420315 (Triazine) Complex)
pdb|1DXR|H Chain H, Photosynthetic Reaction Center From Rhodopseudomonas
Viridis - His L168 Phe Mutant (Terbutryn Complex)
pdb|1R2C|H Chain H, Photosynthetic Reaction Center Blastochloris Viridis
(Atcc)
pdb|1VRN|H Chain H, Photosynthetic Reaction Center Blastochloris Viridis
(Atcc)
pdb|2I5N|H Chain H, 1.96 A X-Ray Structure Of Photosynthetic Reaction Center
From Rhodopseudomonas Viridis:crystals Grown By
Microfluidic Technique
pdb|2JBL|H Chain H, Photosynthetic Reaction Center From Blastochloris Viridis
pdb|3D38|H Chain H, Crystal Structure Of New Trigonal Form Of Photosynthetic
Reaction Center From Blastochloris Viridis. Crystals
Grown In Microfluidics By Detergent Capture.
pdb|1PRC|H Chain H, Crystallographic Refinement At 2.3 Angstroms Resolution
And Refined Model Of The Photosynthetic Reaction Center
From Rhodopseudomonas Viridis
pdb|2WJM|H Chain H, Lipidic Sponge Phase Crystal Structure Of The
Photosynthetic Reaction Centre From Blastochloris
Viridis (Low Dose)
pdb|2WJN|H Chain H, Lipidic Sponge Phase Crystal Structure Of Photosynthetic
Reaction Centre From Blastochloris Viridis (High Dose)
pdb|2X5U|H Chain H, 80 Microsecond Laue Diffraction Snapshot From Crystals Of
A Photosynthetic Reaction Centre Without Illumination.
pdb|2X5V|H Chain H, 80 Microsecond Laue Diffraction Snapshot From Crystals Of
A Photosynthetic Reaction Centre 3 Millisecond Following
Photoactivation
pdb|3T6E|H Chain H, Crystal Structure Of The Reaction Centre From
Blastochloris Viridis Strain Dsm 133 (Atcc 19567)
Substrain-94
pdb|4AC5|H Chain H, Lipidic Sponge Phase Crystal Structure Of The Bl. Viridis
Reaction Centre Solved Using Serial Femtosecond
Crystallography
Length = 258
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 192 GVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALAHGKASIPHARIVGQYSSAENRK 251
G EG P L GN + VG E VDA GKA I R+ +S AE
Sbjct: 95 GFEGAP----LQPTGNPLVDAVGPASYAERAEVVDATVDGKAKIVPLRVATDFSIAEGD- 149
Query: 252 VHQVVDPRS 260
VDPR
Sbjct: 150 ----VDPRG 154
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,439,532
Number of Sequences: 62578
Number of extensions: 288631
Number of successful extensions: 751
Number of sequences better than 100.0: 188
Number of HSP's better than 100.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 571
Number of HSP's gapped (non-prelim): 194
length of query: 262
length of database: 14,973,337
effective HSP length: 97
effective length of query: 165
effective length of database: 8,903,271
effective search space: 1469039715
effective search space used: 1469039715
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)