BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024786
(262 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 135/237 (56%), Gaps = 16/237 (6%)
Query: 33 EQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKR 92
+QEQLPCPRC+S+NTKFCYYNNYNFSQPRHFCK+CRRYWTHGGTLRD+PVGGGTRK+AKR
Sbjct: 26 QQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKR 85
Query: 93 CRTIPSSTCAATNTMSITPGVAVGSAHQDYPLHATPVLVP----FQGGSAPLKAANMNG- 147
R TC+ +++ S V S PL TPVL P G + + ++ G
Sbjct: 86 SR-----TCSNSSSSS---VSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTESDGKGS 137
Query: 148 GYGVCGNGTGA--GGFASLLSPQGPGFLALGGFGLGLGSGFVGDVGLAGLGRGAWGLAGV 205
+CG+ T A+ + G G + G DV GLGR W + V
Sbjct: 138 ALSLCGSFTSTLLNHNAAATATHGSGSVIGIGGFGIGLGSGFDDVSF-GLGRAMWPFSTV 196
Query: 206 SDAGAAAANGGGGGGSSGIGNTWQFESGEATTTSGFGTADCFSWPDLAISTPGNGLK 262
A GG + + TWQFE E+ GF + + F+WPDL+I+TPGN LK
Sbjct: 197 GTATTTNVGSNGGHHAVPMPATWQFEGLESNAGGGFVSGEYFAWPDLSITTPGNSLK 253
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 128/227 (56%), Gaps = 40/227 (17%)
Query: 30 PAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKN 89
P +QEQL CPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGG +RK+
Sbjct: 25 PTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKS 84
Query: 90 AKRCRTIPSSTCAATNTMSITPGVAVGSAHQDYPLHATPVLVPFQGGSAPLKAANMNGGY 149
+KR RT S AAT ++ VGS +++PL ATPVL P ++ NGG
Sbjct: 85 SKRSRTYSS---AATTSV-------VGS--RNFPLQATPVLFP---------QSSSNGGI 123
Query: 150 GVCGNGTGA--GGFASLLSPQGP--------GFLALGGFGLGLGSGFVGDVGLAGLGRGA 199
+ GGF+SL++ GF FGLGLG G + G G
Sbjct: 124 TTAKGSASSFYGGFSSLINYNAAVSRNGPGGGFNGPDAFGLGLGHGSYYEDVRYGQGITV 183
Query: 200 WGL-AGVSDAGAAAANGGGGGGSSGIGNTWQFESGEATTTSGFGTAD 245
W +G +DA ++ + I TWQFE E+ GF + D
Sbjct: 184 WPFSSGATDAATTTSH------IAQIPATWQFEGQESKV--GFVSGD 222
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 58/67 (86%)
Query: 33 EQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKR 92
EQEQL CPRC+S NTKFCYYNNYN SQPRHFCK+CRRYWT GG LR+IPVGGGTRK+ KR
Sbjct: 29 EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKR 88
Query: 93 CRTIPSS 99
+ PSS
Sbjct: 89 SGSSPSS 95
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 97/197 (49%), Gaps = 38/197 (19%)
Query: 30 PAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKN 89
P + L CPRC+STNTKFCYYNNY+ +QPR+FCKSCRRYWT GGTLR+IPVGGG RKN
Sbjct: 48 PQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKN 107
Query: 90 AKRCRTIPSSTCAATNTMSITPGVAVGSAHQDYPLHATPVLVPFQGGSAPLKAANMNGGY 149
+ ST +A ++ TP P AA N GY
Sbjct: 108 KR-------STSSAARSLRTTPE-------------------PASHDGKVFSAAGFN-GY 140
Query: 150 GVCGNGTGAGGFASLLSPQGPGFLALGGFGLGLGSGFVGDVGLAGLGRGAWGLAGVSDAG 209
+ + FA LL+ Q PG + GF LGS D+ G+ G S
Sbjct: 141 SNNEHIDLSLAFA-LLNKQHPGSSSQLGFHSELGSSHQSDME---------GMFGTSQQK 190
Query: 210 AAAANGGGGGGSSGIGN 226
A G GSSG+G+
Sbjct: 191 ENATY-AFGNGSSGLGD 206
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 24 RVTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVG 83
R N + L CPRC S NTKFCYYNNYN SQPRHFCK+CRRYWT GG LR++PVG
Sbjct: 38 RAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVG 97
Query: 84 GGTRKNAKRCRT--IPSSTCAATNT 106
GG RK AKR +T +PSS+ A T
Sbjct: 98 GGCRK-AKRSKTKQVPSSSSADKPT 121
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 68/101 (67%), Gaps = 8/101 (7%)
Query: 23 KRVTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPV 82
K ++A PA ++ L CPRC+STNTKFCYYNNY+ SQPR+FCKSCRRYWT GG LR+IP+
Sbjct: 26 KPLSATRPAPPEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPI 85
Query: 83 GGGTRKNAKRCRTIPSSTCAATNTMSITPGVAVGSAHQDYP 123
GG RK+ + + +AT ++ TP + + +P
Sbjct: 86 GGAYRKHKR--------SSSATKSLRTTPEPTMTHDGKSFP 118
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 35 EQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRCR 94
E L CPRC+S NTKFCYYNNY+ SQPR+FCK+CRRYWTHGGTLR++P+GGG RKN R
Sbjct: 58 EALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKNKHASR 117
Query: 95 TI 96
+
Sbjct: 118 FV 119
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 58/78 (74%)
Query: 17 SSSSSNKRVTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGT 76
S +S K+ + + A +Q+ L CPRC S NTKFCYYNNY+ SQPRHFCKSCRRYWT GG
Sbjct: 21 SGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGA 80
Query: 77 LRDIPVGGGTRKNAKRCR 94
LR++P+GGG RK K +
Sbjct: 81 LRNVPIGGGCRKTKKSIK 98
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 53/68 (77%)
Query: 24 RVTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVG 83
R N A + L CPRCESTNTKFCY+NNY+ +QPRHFCK+CRRYWT GG LR++PVG
Sbjct: 76 RARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVG 135
Query: 84 GGTRKNAK 91
GG R+N +
Sbjct: 136 GGCRRNRR 143
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 81/140 (57%), Gaps = 19/140 (13%)
Query: 3 TDSNENNNNNNNNSSSSSSNKRVTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRH 62
TD E+++ +N ++ K T K P + LPCPRC+S TKFCYYNNYN +QPRH
Sbjct: 81 TDQIESSDTPEDNQQTTPDGK--TLKKPT---KILPCPRCKSMETKFCYYNNYNINQPRH 135
Query: 63 FCKSCRRYWTHGGTLRDIPVGGGTRKNAK-----RCRTIPSSTCAA-------TNTMSIT 110
FCK+C+RYWT GGT+R++PVG G RKN R TI + AA NT ++
Sbjct: 136 FCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRHITISEALEAARLDPGLQANTRVLS 195
Query: 111 PGVAVGSAHQDYPLHATPVL 130
G+ H P+ TPV+
Sbjct: 196 FGLEAQQQHVAAPM--TPVM 213
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 50/56 (89%)
Query: 37 LPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKR 92
L CPRC+S NTKFCYYNNYN SQPRHFCKSCRRYWT GG LR++PVGGG+RKNA +
Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATK 84
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 5 SNENNNNNNNNSSSSSSNKRVTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFC 64
++E N N + + S K T K P + LPCPRC S TKFCYYNNYN +QPRHFC
Sbjct: 25 ADEEEEKNQNKTLTDQSEKDKTLKKPT---KILPCPRCNSMETKFCYYNNYNVNQPRHFC 81
Query: 65 KSCRRYWTHGGTLRDIPVGGGTRKNA 90
K+C+RYWT GGT+R +P+G G RKN
Sbjct: 82 KACQRYWTSGGTMRSVPIGAGRRKNK 107
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%)
Query: 37 LPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKR 92
L CPRC+S+NTKFCYYNNYN +QPRHFCK CRRYWT GG LR++PVGGG R+N K+
Sbjct: 77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKK 132
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 75/119 (63%), Gaps = 7/119 (5%)
Query: 31 AAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNA 90
A QE++ CPRC STNTKFCYYNNY+ +QPR+FCK CRRYWT GG+LR++PVGG +RKN
Sbjct: 68 ARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN- 126
Query: 91 KRCRTIPSSTCAATNTMSITPGVAVGS-----AHQDYPLHATPVLVPFQGGSAPLKAAN 144
KR T P ++ + + P + S +++D L + PV+ + L +N
Sbjct: 127 KRSST-PLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHHALELLRSN 184
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 27 AKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGT 86
AK P E L CPRC+STNTKFCY+NNY+ +QPRHFCK+CRRYWT GG+LR++PVGGG
Sbjct: 67 AKVPLPEAA-LNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGF 125
Query: 87 RKNAKRCRTIPSSTCAA 103
R+N KR ++ ST
Sbjct: 126 RRN-KRSKSRSKSTVVV 141
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 23 KRVTAKNPA-AEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIP 81
+++ K P+ A Q L CPRC+S NTKFCYYNNY+ SQPRH+CK+CRRYWT GG LR++P
Sbjct: 26 RQINNKEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVP 85
Query: 82 VGGGTRKNAKRC 93
+GG TR K C
Sbjct: 86 IGGSTRNKNKPC 97
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 52/73 (71%)
Query: 14 NNSSSSSSNKRVTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTH 73
N + + A P E LPCPRC ST TKFCYYNNYN +QPR++CKSCRRYWT
Sbjct: 6 NQTRPTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQ 65
Query: 74 GGTLRDIPVGGGT 86
GGTLRD+PVGGGT
Sbjct: 66 GGTLRDVPVGGGT 78
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 37 LPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRCR 94
L CPRC+S+NTKFCYYNNY+ SQPRHFCK+C+RYWT GGTLR++PVGG RKN + R
Sbjct: 27 LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRVKR 84
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 46/52 (88%)
Query: 38 PCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKN 89
PCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GGTLR++PVGGGTRK
Sbjct: 48 PCPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKK 99
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%)
Query: 27 AKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGT 86
AKN + L CPRC+S NTKFCY+NNYN +QPRHFCK+CRRYWT GG LR++PVGGG
Sbjct: 84 AKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGC 143
Query: 87 RK 88
R+
Sbjct: 144 RR 145
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%)
Query: 39 CPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAK 91
CPRCES NTKFCYYNNY+ SQPR+FCKSCRRYWT GGTLR++PVGGG R+N +
Sbjct: 50 CPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKR 102
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 50/60 (83%)
Query: 25 VTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGG 84
V A+ A QE+L CPRC STNTKFCYYNNY+ +QPR+FCK CRRYWT GG+LR++PVGG
Sbjct: 68 VVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 52/69 (75%)
Query: 23 KRVTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPV 82
+R N + L CPRC+STNTKFCY+NNY+ +QPRHFCK+CRRYWT GG LR +PV
Sbjct: 81 ERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPV 140
Query: 83 GGGTRKNAK 91
GGG R+N +
Sbjct: 141 GGGCRRNKR 149
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Query: 33 EQEQ-LPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAK 91
E++Q + CPRC STNTKFCYYNNY+ +QPR+FCK CRRYWT GG+LR+IPVGGG+RKN +
Sbjct: 48 EKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKR 107
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 45/53 (84%)
Query: 37 LPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKN 89
LPCPRC S TKFCYYNNYN +QPRHFCK C+RYWT GGT+R++PVG G RKN
Sbjct: 138 LPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKN 190
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%)
Query: 23 KRVTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPV 82
K++ QE CPRC S+NTKFCYYNNY+ +QPR+ CKSCRRYWT GG+LR++PV
Sbjct: 54 KKLMTTMSTRPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPV 113
Query: 83 GGGTRKNAK 91
GGG+RKN K
Sbjct: 114 GGGSRKNKK 122
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 48/53 (90%)
Query: 37 LPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKN 89
+PCPRCES NTKFCYYNNYN +QPR+FC++C+RYWT GG++R++PVG G RKN
Sbjct: 132 IPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKN 184
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 46/49 (93%)
Query: 39 CPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTR 87
CPRCEST+TKFCYYNNY+ SQPR+FCK+CRRYWT GGTLR+IPVGGG R
Sbjct: 75 CPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 123
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 10/92 (10%)
Query: 8 NNNNNNNNSSSSSSNKRVTAKNPAAEQEQ----------LPCPRCESTNTKFCYYNNYNF 57
N NN + +S +S ++ +E+E+ LPCPRC S +TKFCYYNNYN
Sbjct: 66 NLNNESKETSENSDDQHSEITTITSEEEKTTELKKPDKILPCPRCNSADTKFCYYNNYNV 125
Query: 58 SQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKN 89
+QPRHFC+ C+RYWT GG++R +PVG G RKN
Sbjct: 126 NQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKN 157
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 3/64 (4%)
Query: 31 AAEQEQLP---CPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTR 87
+ EQE + CPRC S+NTKFCYYNNY+ SQPR+FCK CRRYWT GG+LR+IPVGGG R
Sbjct: 29 SYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCR 88
Query: 88 KNAK 91
K ++
Sbjct: 89 KRSR 92
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 39 CPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRCRTIPS 98
CPRC+S NTKFC+YNNY+ SQPR+FCK+CRRYWTHGG LR+IPVGG RK KR + S
Sbjct: 26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRK-PKRLKVDQS 84
Query: 99 ST 100
S
Sbjct: 85 SI 86
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Query: 39 CPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRCRTIPS 98
C RC+S NTKFCYYNNY+ QPR+FCK+CRRYWTHGG LR++P+GG +R AKR R I
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSR--AKRTR-INQ 83
Query: 99 STCAATNTMSITPG 112
+ A ++ I PG
Sbjct: 84 PSVAQMVSVGIQPG 97
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 37 LPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKN 89
+PCPRC+S TKFCY+NNYN +QPRHFCK C+RYWT GG LR++PVG G RK+
Sbjct: 62 IPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKS 114
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 47/62 (75%)
Query: 25 VTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGG 84
V K + + L CPRC S NTKFCYYNNY+ +QPR+FCK CRRYWT GG+LR+IPVGG
Sbjct: 37 VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGG 96
Query: 85 GT 86
G
Sbjct: 97 GV 98
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 29 NPAAEQEQLP-CPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTR 87
N A E P CPRC S+NTKFCYYNNY+ +QPR+FCK CRRYWT GG+LR++PVGGG R
Sbjct: 16 NANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCR 75
Query: 88 KNAK 91
K+ +
Sbjct: 76 KSRR 79
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 18 SSSSNKRVTAKNPAAEQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTL 77
SSSS+ K P + + CPRC+S TKFCY+NNYN +QPRHFCK C RYWT GG L
Sbjct: 42 SSSSSDLTAEKRP---DKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGAL 98
Query: 78 RDIPVGGGTRKN 89
R++PVG G RK+
Sbjct: 99 RNVPVGAGRRKS 110
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 46/57 (80%), Gaps = 2/57 (3%)
Query: 39 CPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRCRT 95
C RC+S NTKFCYYNNY QPR+FCK+CRRYWTHGG LR+IP+GG +R AKR R
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSR--AKRARV 81
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%)
Query: 39 CPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRK 88
CPRC S T+F Y+NN SQPR+ CK+C R WTHGG LR+IPV G K
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDK 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,713,570
Number of Sequences: 539616
Number of extensions: 6090385
Number of successful extensions: 124407
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 585
Number of HSP's that attempted gapping in prelim test: 40297
Number of HSP's gapped (non-prelim): 48693
length of query: 262
length of database: 191,569,459
effective HSP length: 115
effective length of query: 147
effective length of database: 129,513,619
effective search space: 19038501993
effective search space used: 19038501993
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)