Query 024788
Match_columns 262
No_of_seqs 28 out of 30
Neff 2.1
Searched_HMMs 29240
Date Mon Mar 25 14:26:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024788.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024788hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h2b_A SAM-dependent methyltra 97.9 1.2E-05 4.2E-10 61.5 5.1 136 92-234 42-178 (203)
2 3lcc_A Putative methyl chlorid 97.7 0.00011 3.9E-09 57.7 7.9 129 93-232 68-201 (235)
3 3e23_A Uncharacterized protein 97.6 3.9E-05 1.3E-09 59.2 4.2 131 93-233 45-177 (211)
4 2yqz_A Hypothetical protein TT 97.6 4.4E-05 1.5E-09 60.0 4.5 136 92-232 40-190 (263)
5 1xtp_A LMAJ004091AAA; SGPP, st 97.6 6.5E-05 2.2E-09 58.9 4.5 139 91-234 93-234 (254)
6 3jwg_A HEN1, methyltransferase 97.6 0.00011 3.7E-09 57.0 5.7 99 92-193 30-140 (219)
7 2p8j_A S-adenosylmethionine-de 97.6 2.3E-05 7.7E-10 59.8 1.7 155 77-234 11-179 (209)
8 2ex4_A Adrenal gland protein A 97.5 6.8E-05 2.3E-09 59.4 4.3 137 92-233 80-220 (241)
9 3cgg_A SAM-dependent methyltra 97.5 0.00024 8.2E-09 52.6 6.7 122 91-232 46-169 (195)
10 3jwh_A HEN1; methyltransferase 97.5 0.00022 7.5E-09 55.4 6.7 100 93-195 31-142 (217)
11 3dli_A Methyltransferase; PSI- 97.4 0.00027 9.1E-09 55.9 6.4 133 93-232 43-178 (240)
12 3hnr_A Probable methyltransfer 97.3 0.00061 2.1E-08 52.5 6.7 137 91-232 45-195 (220)
13 3cc8_A Putative methyltransfer 97.3 0.00067 2.3E-08 51.6 6.8 135 90-232 31-179 (230)
14 1xxl_A YCGJ protein; structura 97.3 0.0017 5.9E-08 51.6 9.4 148 80-231 10-167 (239)
15 3f4k_A Putative methyltransfer 97.2 0.00047 1.6E-08 54.3 5.9 132 93-231 48-189 (257)
16 3ujc_A Phosphoethanolamine N-m 97.2 0.00011 3.7E-09 57.6 2.2 137 92-232 56-200 (266)
17 3g5l_A Putative S-adenosylmeth 97.2 0.00015 5.3E-09 57.3 2.9 107 82-193 34-144 (253)
18 3dlc_A Putative S-adenosyl-L-m 97.2 0.001 3.4E-08 50.3 7.0 111 81-194 33-148 (219)
19 3l8d_A Methyltransferase; stru 97.1 0.0013 4.3E-08 51.2 6.8 149 79-234 42-196 (242)
20 3ou2_A SAM-dependent methyltra 97.1 0.00089 3E-08 50.9 5.8 94 93-194 48-146 (218)
21 2p7i_A Hypothetical protein; p 97.0 0.0027 9.1E-08 48.7 7.8 95 93-194 44-141 (250)
22 3d2l_A SAM-dependent methyltra 97.0 0.0014 4.7E-08 50.8 6.0 97 93-193 35-136 (243)
23 3sm3_A SAM-dependent methyltra 96.9 0.00056 1.9E-08 52.4 3.3 100 91-194 30-141 (235)
24 4htf_A S-adenosylmethionine-de 96.9 0.0027 9.2E-08 51.4 7.4 138 87-231 64-225 (285)
25 3dh0_A SAM dependent methyltra 96.8 0.0023 7.8E-08 49.2 6.0 130 93-232 39-175 (219)
26 3ccf_A Cyclopropane-fatty-acyl 96.8 0.0034 1.2E-07 50.8 7.3 134 92-232 58-204 (279)
27 2i62_A Nicotinamide N-methyltr 96.8 0.0017 5.7E-08 51.0 5.2 137 92-234 57-235 (265)
28 3dtn_A Putative methyltransfer 96.8 0.0017 5.9E-08 50.6 5.1 101 91-194 44-148 (234)
29 1vl5_A Unknown conserved prote 96.8 0.0051 1.8E-07 48.9 8.0 137 91-231 37-183 (260)
30 1y8c_A S-adenosylmethionine-de 96.7 0.0032 1.1E-07 48.5 6.5 103 88-193 34-141 (246)
31 1kpg_A CFA synthase;, cyclopro 96.7 0.0033 1.1E-07 50.7 6.6 99 92-194 65-168 (287)
32 1vlm_A SAM-dependent methyltra 96.7 0.013 4.5E-07 45.7 9.6 140 80-233 38-183 (219)
33 1ri5_A MRNA capping enzyme; me 96.6 0.0068 2.3E-07 48.4 7.9 105 86-194 59-174 (298)
34 2fk8_A Methoxy mycolic acid sy 96.6 0.0035 1.2E-07 51.7 6.2 138 92-233 91-249 (318)
35 3m70_A Tellurite resistance pr 96.6 0.0025 8.7E-08 51.6 5.1 102 92-196 121-225 (286)
36 3pfg_A N-methyltransferase; N, 96.4 0.0056 1.9E-07 48.8 6.2 111 77-193 37-150 (263)
37 2yxd_A Probable cobalt-precorr 96.4 0.0023 7.8E-08 47.0 3.7 109 92-210 36-148 (183)
38 3bxo_A N,N-dimethyltransferase 96.4 0.0053 1.8E-07 47.4 5.8 110 79-194 29-141 (239)
39 4gek_A TRNA (CMO5U34)-methyltr 96.4 0.013 4.5E-07 49.0 8.5 116 75-193 54-177 (261)
40 3bus_A REBM, methyltransferase 96.4 0.015 5.1E-07 46.3 8.4 139 91-232 61-210 (273)
41 3bkw_A MLL3908 protein, S-aden 96.4 0.0034 1.2E-07 48.6 4.4 98 92-194 44-144 (243)
42 3ege_A Putative methyltransfer 96.3 0.0066 2.3E-07 49.0 6.1 100 91-197 34-134 (261)
43 3bkx_A SAM-dependent methyltra 96.3 0.038 1.3E-06 44.0 10.4 102 91-194 43-159 (275)
44 3hm2_A Precorrin-6Y C5,15-meth 96.3 0.0094 3.2E-07 44.0 6.4 100 91-196 25-129 (178)
45 2xvm_A Tellurite resistance pr 96.3 0.0044 1.5E-07 46.4 4.5 99 93-194 34-136 (199)
46 2o57_A Putative sarcosine dime 96.3 0.013 4.4E-07 47.5 7.4 138 91-232 82-228 (297)
47 2r3s_A Uncharacterized protein 96.2 0.017 5.9E-07 47.6 8.2 148 82-234 153-319 (335)
48 3g2m_A PCZA361.24; SAM-depende 96.2 0.0048 1.6E-07 50.6 4.5 106 86-194 77-190 (299)
49 1qzz_A RDMB, aclacinomycin-10- 96.2 0.0082 2.8E-07 50.6 6.1 147 82-233 172-334 (374)
50 2zfu_A Nucleomethylin, cerebra 96.2 0.012 4E-07 45.4 6.4 107 91-233 67-174 (215)
51 3ofk_A Nodulation protein S; N 96.1 0.0063 2.2E-07 46.8 4.8 112 79-194 38-154 (216)
52 1nkv_A Hypothetical protein YJ 96.1 0.01 3.5E-07 46.6 6.0 98 92-193 37-139 (256)
53 1ve3_A Hypothetical protein PH 96.1 0.0072 2.5E-07 46.3 5.0 115 77-194 25-142 (227)
54 3vc1_A Geranyl diphosphate 2-C 96.1 0.0051 1.8E-07 51.1 4.4 135 92-231 118-262 (312)
55 2ip2_A Probable phenazine-spec 96.1 0.027 9.4E-07 46.8 8.8 149 81-233 157-317 (334)
56 3kkz_A Uncharacterized protein 96.1 0.0077 2.6E-07 48.3 5.2 99 92-194 47-150 (267)
57 1tw3_A COMT, carminomycin 4-O- 96.0 0.018 6.2E-07 48.4 7.2 147 82-233 173-334 (360)
58 3i9f_A Putative type 11 methyl 95.9 0.011 3.8E-07 43.8 5.2 94 92-194 18-112 (170)
59 2pxx_A Uncharacterized protein 95.9 0.0043 1.5E-07 46.8 2.9 102 91-194 42-159 (215)
60 2g72_A Phenylethanolamine N-me 95.9 0.015 5E-07 47.5 6.2 136 92-234 72-252 (289)
61 2avn_A Ubiquinone/menaquinone 95.9 0.0078 2.7E-07 48.4 4.5 107 81-194 45-152 (260)
62 2gs9_A Hypothetical protein TT 95.9 0.0092 3.1E-07 45.7 4.6 96 91-194 36-132 (211)
63 3bzb_A Uncharacterized protein 95.8 0.015 5.2E-07 48.4 6.0 135 93-229 81-248 (281)
64 3dp7_A SAM-dependent methyltra 95.7 0.038 1.3E-06 47.5 8.3 147 82-234 170-338 (363)
65 3g5t_A Trans-aconitate 3-methy 95.6 0.013 4.6E-07 48.0 4.9 106 83-192 28-147 (299)
66 3iv6_A Putative Zn-dependent a 95.5 0.014 4.7E-07 50.2 4.9 102 93-197 47-151 (261)
67 2p35_A Trans-aconitate 2-methy 95.5 0.03 1E-06 43.9 6.2 134 91-231 33-183 (259)
68 1yzh_A TRNA (guanine-N(7)-)-me 95.4 0.056 1.9E-06 42.1 7.6 126 84-210 34-173 (214)
69 3e8s_A Putative SAM dependent 95.3 0.018 6.2E-07 43.6 4.4 135 93-234 54-205 (227)
70 2qe6_A Uncharacterized protein 95.3 0.044 1.5E-06 46.0 7.1 137 91-234 77-238 (274)
71 3m33_A Uncharacterized protein 95.2 0.1 3.5E-06 41.1 8.5 91 90-191 47-139 (226)
72 3gu3_A Methyltransferase; alph 95.2 0.024 8.3E-07 46.4 5.1 98 92-193 23-125 (284)
73 2kw5_A SLR1183 protein; struct 95.1 0.047 1.6E-06 41.5 6.1 97 94-194 32-131 (202)
74 3hem_A Cyclopropane-fatty-acyl 95.0 0.047 1.6E-06 44.8 6.4 137 92-232 73-237 (302)
75 3mgg_A Methyltransferase; NYSG 95.0 0.031 1E-06 44.7 5.1 99 92-193 38-141 (276)
76 3grz_A L11 mtase, ribosomal pr 95.0 0.031 1.1E-06 42.8 4.8 100 92-199 61-164 (205)
77 1dus_A MJ0882; hypothetical pr 94.9 0.029 9.8E-07 41.3 4.4 105 91-199 52-162 (194)
78 3bgv_A MRNA CAP guanine-N7 met 94.8 0.03 1E-06 46.3 4.7 103 92-194 35-155 (313)
79 3i53_A O-methyltransferase; CO 94.6 0.086 3E-06 44.1 7.0 147 81-233 158-316 (332)
80 4hg2_A Methyltransferase type 94.6 0.062 2.1E-06 45.1 6.1 104 82-195 31-136 (257)
81 3ggd_A SAM-dependent methyltra 94.6 0.0094 3.2E-07 46.9 1.0 100 92-194 57-163 (245)
82 3gwz_A MMCR; methyltransferase 94.5 0.27 9.3E-06 42.3 10.1 149 80-234 190-352 (369)
83 3lst_A CALO1 methyltransferase 94.4 0.12 4E-06 43.9 7.5 148 82-234 174-332 (348)
84 3mcz_A O-methyltransferase; ad 94.3 0.14 4.6E-06 43.0 7.6 140 92-234 180-335 (352)
85 4e2x_A TCAB9; kijanose, tetron 94.2 0.006 2.1E-07 52.6 -0.8 138 84-232 99-247 (416)
86 1fp2_A Isoflavone O-methyltran 94.2 0.071 2.4E-06 45.2 5.7 134 91-233 188-336 (352)
87 3htx_A HEN1; HEN1, small RNA m 94.1 0.089 3E-06 54.2 7.2 105 91-197 721-836 (950)
88 1x19_A CRTF-related protein; m 93.9 0.81 2.8E-05 38.7 11.6 147 81-233 179-343 (359)
89 1wzn_A SAM-dependent methyltra 93.7 0.1 3.4E-06 41.0 5.3 98 92-192 42-143 (252)
90 1ej0_A FTSJ; methyltransferase 93.6 0.057 2E-06 38.6 3.5 101 91-199 22-141 (180)
91 1fp1_D Isoliquiritigenin 2'-O- 93.6 0.12 4.2E-06 44.2 6.1 144 81-233 197-355 (372)
92 3ocj_A Putative exported prote 93.6 0.24 8.2E-06 40.9 7.6 102 91-194 118-227 (305)
93 1ne2_A Hypothetical protein TA 93.2 0.12 4.1E-06 39.6 4.9 110 91-210 51-162 (200)
94 2aot_A HMT, histamine N-methyl 93.1 0.12 4.3E-06 42.3 5.1 149 80-232 39-215 (292)
95 4fsd_A Arsenic methyltransfera 93.0 0.17 5.7E-06 43.9 6.1 140 91-232 83-245 (383)
96 3thr_A Glycine N-methyltransfe 92.5 0.059 2E-06 43.4 2.5 100 92-193 58-174 (293)
97 3g07_A 7SK snRNA methylphospha 92.1 0.069 2.4E-06 44.4 2.4 105 92-196 47-222 (292)
98 3p9n_A Possible methyltransfer 92.0 0.27 9.3E-06 37.4 5.5 114 80-194 33-153 (189)
99 1l3i_A Precorrin-6Y methyltran 91.9 0.12 4E-06 38.0 3.1 99 91-196 33-136 (192)
100 3lbf_A Protein-L-isoaspartate 91.8 0.16 5.6E-06 38.8 4.1 97 91-197 77-177 (210)
101 1pjz_A Thiopurine S-methyltran 91.6 0.096 3.3E-06 41.1 2.7 127 93-231 24-169 (203)
102 1fbn_A MJ fibrillarin homologu 91.6 0.16 5.4E-06 40.3 3.9 95 93-193 76-177 (230)
103 2a14_A Indolethylamine N-methy 91.5 0.13 4.5E-06 41.8 3.4 87 141-233 138-233 (263)
104 3q87_B N6 adenine specific DNA 91.4 0.59 2E-05 35.6 6.8 94 93-196 25-125 (170)
105 1p91_A Ribosomal RNA large sub 91.1 0.47 1.6E-05 37.8 6.2 93 90-194 84-178 (269)
106 1yb2_A Hypothetical protein TA 90.9 0.25 8.6E-06 40.4 4.6 96 93-197 112-214 (275)
107 1mjf_A Spermidine synthase; sp 90.1 0.065 2.2E-06 45.0 0.4 116 75-197 62-197 (281)
108 1vbf_A 231AA long hypothetical 90.1 0.28 9.7E-06 38.0 4.0 95 92-197 71-168 (231)
109 1zx0_A Guanidinoacetate N-meth 90.0 0.25 8.5E-06 39.0 3.7 106 91-196 60-172 (236)
110 3mti_A RRNA methylase; SAM-dep 89.8 0.36 1.2E-05 36.2 4.3 100 93-198 24-139 (185)
111 3adn_A Spermidine synthase; am 89.0 0.6 2.1E-05 40.1 5.6 122 69-194 64-198 (294)
112 2pt6_A Spermidine synthase; tr 89.0 0.23 7.9E-06 42.9 3.0 117 76-197 104-234 (321)
113 1iy9_A Spermidine synthase; ro 88.6 0.39 1.3E-05 40.3 4.1 118 76-197 63-193 (275)
114 1zg3_A Isoflavanone 4'-O-methy 88.5 0.33 1.1E-05 41.2 3.6 132 91-233 193-342 (358)
115 2ld4_A Anamorsin; methyltransf 88.3 0.42 1.4E-05 35.8 3.7 80 140-230 45-128 (176)
116 1inl_A Spermidine synthase; be 88.0 0.38 1.3E-05 40.8 3.7 119 75-197 77-209 (296)
117 2esr_A Methyltransferase; stru 87.7 0.085 2.9E-06 39.4 -0.4 104 92-198 32-142 (177)
118 3dmg_A Probable ribosomal RNA 87.6 0.77 2.6E-05 40.9 5.5 122 74-197 216-343 (381)
119 2fpo_A Methylase YHHF; structu 87.4 0.13 4.5E-06 40.3 0.5 104 93-199 56-165 (202)
120 2yxe_A Protein-L-isoaspartate 87.4 0.32 1.1E-05 37.3 2.6 96 93-197 79-180 (215)
121 2nxc_A L11 mtase, ribosomal pr 87.4 0.36 1.2E-05 39.5 3.1 97 92-199 121-223 (254)
122 3mb5_A SAM-dependent methyltra 87.2 0.77 2.6E-05 36.2 4.7 110 92-210 94-211 (255)
123 2b3t_A Protein methyltransfera 86.9 1 3.5E-05 36.6 5.5 71 91-163 109-183 (276)
124 2gb4_A Thiopurine S-methyltran 86.8 0.39 1.3E-05 39.9 3.0 101 92-194 69-191 (252)
125 2o07_A Spermidine synthase; st 86.7 0.42 1.4E-05 41.0 3.2 126 76-206 83-222 (304)
126 1jsx_A Glucose-inhibited divis 86.6 0.9 3.1E-05 34.5 4.7 107 93-208 67-178 (207)
127 1jg1_A PIMT;, protein-L-isoasp 86.5 0.72 2.5E-05 36.5 4.3 93 93-195 93-190 (235)
128 2yvl_A TRMI protein, hypotheti 86.2 1.7 5.7E-05 33.8 6.1 96 92-196 92-192 (248)
129 3e05_A Precorrin-6Y C5,15-meth 86.1 1.5 5E-05 33.6 5.7 100 91-196 40-144 (204)
130 3opn_A Putative hemolysin; str 85.5 0.16 5.3E-06 42.0 -0.1 127 93-231 39-177 (232)
131 2ift_A Putative methylase HI07 85.5 0.35 1.2E-05 37.9 2.0 103 93-198 55-167 (201)
132 3reo_A (ISO)eugenol O-methyltr 85.4 1.7 5.9E-05 37.5 6.4 145 82-234 192-351 (368)
133 2pjd_A Ribosomal RNA small sub 85.3 0.36 1.2E-05 41.2 2.1 100 93-195 198-304 (343)
134 3eey_A Putative rRNA methylase 85.2 1.4 4.9E-05 33.2 5.2 108 91-198 22-143 (197)
135 1r18_A Protein-L-isoaspartate( 85.1 0.76 2.6E-05 36.0 3.7 94 93-195 86-195 (227)
136 2y1w_A Histone-arginine methyl 84.7 1.5 5E-05 37.7 5.7 95 93-193 52-154 (348)
137 2fca_A TRNA (guanine-N(7)-)-me 84.6 1.2 4E-05 35.3 4.7 123 84-210 31-170 (213)
138 2b2c_A Spermidine synthase; be 84.3 0.79 2.7E-05 39.8 3.8 117 75-197 95-226 (314)
139 1uir_A Polyamine aminopropyltr 84.2 0.41 1.4E-05 40.9 1.9 117 75-197 64-199 (314)
140 1ws6_A Methyltransferase; stru 83.8 0.32 1.1E-05 35.3 1.0 103 92-199 42-152 (171)
141 1uwv_A 23S rRNA (uracil-5-)-me 83.8 1.1 3.7E-05 40.0 4.5 110 93-210 288-405 (433)
142 2bm8_A Cephalosporin hydroxyla 83.6 1.4 4.7E-05 35.8 4.8 93 93-194 83-187 (236)
143 3evz_A Methyltransferase; NYSG 83.3 1.3 4.3E-05 34.3 4.2 74 90-163 54-130 (230)
144 2pwy_A TRNA (adenine-N(1)-)-me 83.2 0.83 2.8E-05 35.7 3.2 96 91-194 96-198 (258)
145 1wy7_A Hypothetical protein PH 83.2 1.3 4.4E-05 33.7 4.2 90 92-185 50-141 (207)
146 3njr_A Precorrin-6Y methylase; 83.1 2.1 7.2E-05 33.7 5.5 96 92-196 56-156 (204)
147 3r0q_C Probable protein argini 82.5 1.2 4E-05 38.9 4.2 95 93-194 65-169 (376)
148 1i9g_A Hypothetical protein RV 82.3 1.4 4.7E-05 35.3 4.2 94 93-194 101-203 (280)
149 1i1n_A Protein-L-isoaspartate 81.8 1.4 4.8E-05 34.1 4.0 97 92-197 78-185 (226)
150 2b25_A Hypothetical protein; s 80.6 1.7 5.7E-05 36.6 4.3 109 93-208 107-234 (336)
151 2vdv_E TRNA (guanine-N(7)-)-me 80.4 1.7 5.7E-05 34.8 4.1 117 91-211 49-191 (246)
152 2ipx_A RRNA 2'-O-methyltransfe 80.3 1.1 3.7E-05 35.3 2.9 99 93-196 79-184 (233)
153 1o9g_A RRNA methyltransferase; 79.7 1.1 3.9E-05 35.6 2.9 107 91-197 51-217 (250)
154 2qm3_A Predicted methyltransfe 78.8 2.8 9.6E-05 36.3 5.3 101 92-199 173-285 (373)
155 3dxy_A TRNA (guanine-N(7)-)-me 78.5 2.3 8E-05 34.2 4.4 112 84-198 27-154 (218)
156 3mq2_A 16S rRNA methyltransfer 78.1 3 0.0001 32.1 4.7 101 91-193 27-139 (218)
157 4dzr_A Protein-(glutamine-N5) 78.1 0.56 1.9E-05 35.0 0.6 72 91-162 30-107 (215)
158 3p9c_A Caffeic acid O-methyltr 77.9 9.3 0.00032 33.0 8.2 145 82-234 190-349 (364)
159 1o54_A SAM-dependent O-methylt 77.8 4.6 0.00016 32.7 6.0 94 93-195 114-214 (277)
160 2vdw_A Vaccinia virus capping 77.7 1.1 3.7E-05 38.2 2.3 102 93-194 50-169 (302)
161 2pbf_A Protein-L-isoaspartate 77.5 0.99 3.4E-05 35.0 1.8 96 93-196 82-195 (227)
162 1nt2_A Fibrillarin-like PRE-rR 77.4 1.7 5.8E-05 34.7 3.3 94 93-193 59-160 (210)
163 3q7e_A Protein arginine N-meth 76.9 2.5 8.4E-05 36.4 4.3 100 93-193 68-172 (349)
164 3tfw_A Putative O-methyltransf 76.4 2.4 8.2E-05 34.3 3.9 114 75-194 49-170 (248)
165 3gdh_A Trimethylguanosine synt 76.2 2 6.9E-05 33.5 3.3 96 93-193 80-180 (241)
166 2fhp_A Methylase, putative; al 74.5 0.58 2E-05 34.6 -0.2 104 92-198 45-158 (187)
167 2fyt_A Protein arginine N-meth 73.2 5 0.00017 34.5 5.3 95 93-191 66-168 (340)
168 3hp7_A Hemolysin, putative; st 73.0 2.7 9.1E-05 36.9 3.6 131 93-231 87-225 (291)
169 3ntv_A MW1564 protein; rossman 72.9 1.6 5.6E-05 34.7 2.1 98 92-193 72-175 (232)
170 3lpm_A Putative methyltransfer 72.8 3.7 0.00013 33.0 4.2 119 92-210 50-192 (259)
171 1g8a_A Fibrillarin-like PRE-rR 71.4 2.2 7.4E-05 33.2 2.4 96 93-193 75-177 (227)
172 3u81_A Catechol O-methyltransf 70.8 2.9 9.9E-05 32.6 3.0 101 92-194 59-170 (221)
173 2gpy_A O-methyltransferase; st 69.8 1.8 6.1E-05 33.9 1.6 97 93-193 56-159 (233)
174 2i7c_A Spermidine synthase; tr 69.5 2.5 8.4E-05 35.5 2.5 114 75-194 65-192 (283)
175 1u2z_A Histone-lysine N-methyl 69.2 3.3 0.00011 38.2 3.5 100 91-193 242-358 (433)
176 3tr6_A O-methyltransferase; ce 68.7 1.7 5.9E-05 33.4 1.3 119 73-198 48-180 (225)
177 1xdz_A Methyltransferase GIDB; 67.5 5.4 0.00018 31.6 4.0 95 92-193 71-173 (240)
178 3id6_C Fibrillarin-like rRNA/T 66.8 7.6 0.00026 32.6 4.9 133 93-261 78-219 (232)
179 1g6q_1 HnRNP arginine N-methyl 66.7 11 0.00037 32.0 6.0 95 93-191 40-142 (328)
180 2cmg_A Spermidine synthase; tr 63.8 7 0.00024 32.8 4.2 109 75-198 59-176 (262)
181 2plw_A Ribosomal RNA methyltra 63.0 10 0.00035 28.4 4.6 99 92-198 23-158 (201)
182 1xj5_A Spermidine synthase 1; 61.5 7.9 0.00027 33.9 4.2 117 75-196 107-238 (334)
183 3a27_A TYW2, uncharacterized p 59.8 4.7 0.00016 33.4 2.4 97 93-197 121-222 (272)
184 3orh_A Guanidinoacetate N-meth 57.8 11 0.00037 30.2 4.2 102 90-194 59-170 (236)
185 4dcm_A Ribosomal RNA large sub 55.8 9.8 0.00033 33.6 3.9 103 93-197 224-337 (375)
186 2yx1_A Hypothetical protein MJ 55.2 8.7 0.0003 33.0 3.3 91 93-195 197-292 (336)
187 1sui_A Caffeoyl-COA O-methyltr 54.6 9.1 0.00031 31.2 3.2 112 74-194 64-190 (247)
188 2frn_A Hypothetical protein PH 54.4 14 0.00047 30.6 4.3 94 93-194 127-225 (278)
189 1dl5_A Protein-L-isoaspartate 53.8 15 0.00053 30.7 4.6 97 92-197 76-178 (317)
190 2jjq_A Uncharacterized RNA met 52.9 13 0.00046 33.5 4.4 102 92-206 291-399 (425)
191 3bwc_A Spermidine synthase; SA 52.1 8.5 0.00029 32.5 2.8 117 76-196 83-213 (304)
192 1nv8_A HEMK protein; class I a 50.4 25 0.00087 29.4 5.4 67 93-162 125-198 (284)
193 1qam_A ERMC' methyltransferase 50.1 10 0.00034 31.0 2.8 79 93-176 32-113 (244)
194 3ckk_A TRNA (guanine-N(7)-)-me 48.8 16 0.00054 29.7 3.8 118 89-210 44-185 (235)
195 2nyu_A Putative ribosomal RNA 48.8 10 0.00035 28.2 2.5 99 93-199 24-150 (196)
196 1njg_A DNA polymerase III subu 47.6 29 0.001 25.3 4.8 85 159-243 128-216 (250)
197 3c3p_A Methyltransferase; NP_9 46.4 26 0.0009 26.7 4.5 97 92-194 57-160 (210)
198 3c3y_A Pfomt, O-methyltransfer 42.1 12 0.00041 30.0 2.1 112 74-194 55-181 (237)
199 3dr5_A Putative O-methyltransf 41.6 18 0.00063 29.0 3.1 117 74-194 38-163 (221)
200 3cbg_A O-methyltransferase; cy 41.3 29 0.001 27.5 4.2 114 74-193 57-181 (232)
201 3b3j_A Histone-arginine methyl 40.4 22 0.00076 32.6 3.8 94 93-192 160-261 (480)
202 2hnk_A SAM-dependent O-methylt 39.7 11 0.00037 29.7 1.4 98 92-194 61-181 (239)
203 3duw_A OMT, O-methyltransferas 39.4 34 0.0012 26.2 4.2 114 74-194 43-167 (223)
204 3r3h_A O-methyltransferase, SA 39.2 13 0.00044 30.2 1.9 119 73-198 44-176 (242)
205 2h1r_A Dimethyladenosine trans 38.3 25 0.00085 29.7 3.5 67 93-165 44-114 (299)
206 1uf3_A Hypothetical protein TT 37.9 47 0.0016 24.9 4.7 6 189-194 35-40 (228)
207 1af7_A Chemotaxis receptor met 34.3 23 0.00078 30.3 2.7 41 154-194 211-251 (274)
208 3rht_A (gatase1)-like protein; 33.8 33 0.0011 29.7 3.6 81 90-194 2-87 (259)
209 1yub_A Ermam, rRNA methyltrans 33.4 13 0.00046 29.8 1.0 68 92-164 30-100 (245)
210 3lcv_B Sisomicin-gentamicin re 31.3 43 0.0015 30.2 4.1 138 81-230 116-264 (281)
211 1sqg_A SUN protein, FMU protei 31.0 31 0.0011 30.4 3.1 70 93-162 248-321 (429)
212 4df3_A Fibrillarin-like rRNA/T 30.9 77 0.0026 26.8 5.4 42 93-134 79-124 (233)
213 2xyq_A Putative 2'-O-methyl tr 30.0 41 0.0014 29.2 3.6 103 93-210 65-188 (290)
214 2kwt_A Protease NS2-3; NS2 dom 30.0 18 0.00063 23.9 1.1 10 218-227 7-16 (33)
215 1zq9_A Probable dimethyladenos 29.5 42 0.0014 28.0 3.5 66 92-162 29-99 (285)
216 2jwa_A Receptor tyrosine-prote 29.4 30 0.001 23.8 2.1 16 29-44 7-22 (44)
217 2wk1_A NOVP; transferase, O-me 28.8 16 0.00056 31.8 0.9 121 92-216 107-269 (282)
218 3izc_W 60S ribosomal protein R 28.5 16 0.00055 29.7 0.7 23 166-188 76-99 (121)
219 3fpf_A Mtnas, putative unchara 28.3 66 0.0023 28.5 4.7 96 93-199 124-227 (298)
220 3gjy_A Spermidine synthase; AP 27.4 11 0.00037 33.5 -0.5 98 94-194 92-200 (317)
221 2pe4_A Hyaluronidase-1; hyalur 27.0 21 0.00072 34.0 1.3 50 140-194 250-304 (424)
222 2chg_A Replication factor C sm 26.5 76 0.0026 23.0 4.0 84 159-242 104-191 (226)
223 2h00_A Methyltransferase 10 do 26.3 52 0.0018 25.8 3.3 71 93-163 67-147 (254)
224 1ixk_A Methyltransferase; open 26.1 64 0.0022 27.3 4.1 117 93-210 120-266 (315)
225 2ozv_A Hypothetical protein AT 25.7 41 0.0014 27.3 2.7 72 92-163 37-122 (260)
226 2yxl_A PH0851 protein, 450AA l 25.4 67 0.0023 28.6 4.3 67 93-162 261-336 (450)
227 3giw_A Protein of unknown func 25.4 61 0.0021 28.5 3.9 177 49-231 30-240 (277)
228 3l5o_A Uncharacterized protein 24.8 24 0.00081 31.2 1.2 45 171-220 195-240 (270)
229 1o6a_A Putative flagellar moto 24.0 11 0.00039 28.0 -0.8 29 174-202 48-76 (96)
230 2yv2_A Succinyl-COA synthetase 23.7 29 0.00099 29.9 1.5 30 168-197 78-108 (297)
231 3idw_A Actin cytoskeleton-regu 22.8 31 0.001 25.9 1.3 23 221-243 5-29 (72)
232 4fx0_A Probable transcriptiona 22.4 21 0.00071 26.9 0.3 66 76-145 10-86 (148)
233 3kr9_A SAM-dependent methyltra 21.2 87 0.003 26.3 3.9 73 93-166 17-94 (225)
234 1jr3_A DNA polymerase III subu 21.1 65 0.0022 26.3 3.0 84 159-242 121-208 (373)
235 3c0k_A UPF0064 protein YCCW; P 21.1 42 0.0014 29.1 2.0 102 92-199 221-344 (396)
236 1sw5_A Osmoprotection protein 21.0 1.4E+02 0.0047 24.4 5.0 60 79-150 151-211 (275)
237 2h1q_A Hypothetical protein; Z 20.9 32 0.0011 30.2 1.2 28 172-199 196-224 (270)
238 2vz8_A Fatty acid synthase; tr 20.9 28 0.00097 38.5 1.0 95 94-193 1243-1347(2512)
239 3ftd_A Dimethyladenosine trans 20.1 1E+02 0.0034 25.5 4.0 82 92-178 32-116 (249)
No 1
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.90 E-value=1.2e-05 Score=61.46 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=94.6
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccCh
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLsp 171 (262)
-.+||.+|-.+......|.+. ..+..|||+.+ +.-..++....+--+..+|+. .+|+...+|++|+..++|.|+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPAT--RLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCH--HHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCCH
Confidence 468999999999887777766 56889998753 122223332223335567764 46777899999999999999998
Q ss_pred hhhccccccchhhcc-CceEEEecCCcchhhhHHhhhhcCCccccccchhHHHHHHHhccccch
Q 024788 172 KYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEENE 234 (262)
Q Consensus 172 ryLNkTLPeLaRvsa-dglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeEnE 234 (262)
..+-+.|-++.|+-. +|.++++-..... ..++.....+....+...|.+.+.++|++.-+
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 178 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPS---LEPMYHPVATAYRWPLPELAQALETAGFQVTS 178 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSS---CEEECCSSSCEEECCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCc---hhhhhchhhhhccCCHHHHHHHHHHCCCcEEE
Confidence 888999999999765 5666665533322 22233333345567788899999999987543
No 2
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.71 E-value=0.00011 Score=57.67 Aligned_cols=129 Identities=17% Similarity=0.133 Sum_probs=91.1
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh--hhhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS--LVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKs--LvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.+||-||..+......|.+ ...+..|||+.+ ++-+..+++. +..+=-+..+|+.-..| ..+|++|+.+.+|.|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--TELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--SSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--CCCeeEEEEChhhhc
Confidence 4999999999988887765 456788887653 3334444433 11222356677765333 449999999999999
Q ss_pred cChhhhccccccchh-hccCceEEEecCCcchhhhHHhhhhcCCccccccchhHHHHHHHhcccc
Q 024788 169 LSPKYLNKTLPDLAR-VASDGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 169 LspryLNkTLPeLaR-vsadglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeE 232 (262)
++|....+.|-++.| +..+|.+++..++.... .+.|.-..+...|.+.|.++|++.
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDH--------VGGPPYKVDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC--------CSCSSCCCCHHHHHHHHGGGTEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc--------CCCCCccCCHHHHHHHHHHcCCeE
Confidence 999999999999999 46678888888765432 122223356788999999988764
No 3
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.64 E-value=3.9e-05 Score=59.18 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=93.1
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccChh
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 172 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLspr 172 (262)
.+||.+|..+......|.+. ..+..|||+.+ +.-..++... .--+..+|+. .+| ...+|++||.+++|.|+.+.
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~-~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAA-GFDVDATDGSP--ELAAEASRRL-GRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHH-TSCCEECCGG-GCC-CCSCEEEEEECSCGGGSCHH
T ss_pred CcEEEECCCCCHHHHHHHHc-CCeEEEECCCH--HHHHHHHHhc-CCceEEeeec-cCC-CCCcEEEEEecCchhhcCHH
Confidence 58999999999988777766 55788887643 1222233322 2234566764 345 67899999999999999998
Q ss_pred hhccccccchhhcc-CceEEEecCCcchhhhHHhhhhcCCccccccchhHHHHHHHhc-cccc
Q 024788 173 YLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTS-LEEN 233 (262)
Q Consensus 173 yLNkTLPeLaRvsa-dglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~-LeEn 233 (262)
.+.+.|-++.|+-. +|.++++-.++.. .....+++.....+...|.+.|.++| ++.-
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEG----EGRDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSS----CEECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCc----ccccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 89999999999765 5666666444332 12234566677788899999999999 7643
No 4
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.64 E-value=4.4e-05 Score=59.96 Aligned_cols=136 Identities=17% Similarity=0.143 Sum_probs=85.4
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
-.+||.+|..|-.....|.+. ..+..|||+.+ ++-+..++......--+..+|+ ..+|+...+|++|+.++++.++
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~ 117 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWHLV 117 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGGGC
T ss_pred CCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchhhc
Confidence 458999999998877777765 56788888753 2223222211112223456777 4678888899999999999999
Q ss_pred Chhhhccccccchhhc-cCceEEEecCCcc---h----hhhHHh-hhhcCCc----cccccchhHHHHHHHhcccc
Q 024788 170 SPKYLNKTLPDLARVA-SDGVLIFAGYPGQ---Q----RAKVAE-LSKFGRP----AKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 170 spryLNkTLPeLaRvs-adglViF~G~Pgq---q----rakvae-lskfgrp----aK~rsssWW~r~F~qt~LeE 232 (262)
. -..+.|.++.|+- .+|.++++ ++.. . .....+ +.++|.| ....+...|.+.+.+.|++.
T Consensus 118 ~--~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 190 (263)
T 2yqz_A 118 P--DWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKP 190 (263)
T ss_dssp T--THHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred C--CHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCc
Confidence 6 2456788888875 46777776 4433 1 112222 2345544 22344455666777777763
No 5
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.56 E-value=6.5e-05 Score=58.92 Aligned_cols=139 Identities=15% Similarity=0.217 Sum_probs=91.9
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.-.+||.||-.+..+...|++....+..|||+.+ ++-+..+++.. ..--+..+|+. .+|+...+|++|+.++.|.|
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASME-TATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGG-GCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHH-HCCCCCCCeEEEEEcchhhh
Confidence 4568999999999988888877656677887642 33333333322 12234456664 36777889999999999999
Q ss_pred cChhhhccccccchhhcc-CceEEEecCCcchhhhHHhhhhcCCccccccchhHHHHHHHhccccch
Q 024788 169 LSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEENE 234 (262)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeEnE 234 (262)
+++..+.+.|-++.|+-. +|.++++-........ ........-.++..-|.+.|.++|++.-+
T Consensus 171 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 234 (254)
T 1xtp_A 171 LTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF---LVDKEDSSLTRSDIHYKRLFNESGVRVVK 234 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE---EEETTTTEEEBCHHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc---eecccCCcccCCHHHHHHHHHHCCCEEEE
Confidence 998888899999998765 6777776531111000 00111122356777888899888887543
No 6
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.56 E-value=0.00011 Score=57.02 Aligned_cols=99 Identities=17% Similarity=0.180 Sum_probs=71.1
Q ss_pred cceeeeecCCcchhhhhcccccc-ccccccccccccchhHHHHhhhh----------hcceeeeeecCCCCCCCCCccEE
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYDIEDADARCKSLVH----------KGIVRVADIKFPLPYRAKSFPLV 160 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~-tEAWGVEPydied~d~~CKsLvr----------KGiVRvADIkfpLPYR~kSFslV 160 (262)
-.+||-||-.+......|.+... .+.+|||+.+ ++-..++...+ +=-+..+|+ .-+|....+|++|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V 106 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSY--SVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAA 106 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCH--HHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCH--HHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEE
Confidence 45899999999999888887654 6889998753 22223332221 223455677 4466777899999
Q ss_pred EecccccccChhhhccccccchhhccCc-eEEEe
Q 024788 161 IVSDALDYLSPKYLNKTLPDLARVASDG-VLIFA 193 (262)
Q Consensus 161 ivSDaLDyLspryLNkTLPeLaRvsadg-lViF~ 193 (262)
+.+++|.|+++..+.+.|-++.|+-..| ++|++
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 9999999999888888899998887654 44444
No 7
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.55 E-value=2.3e-05 Score=59.80 Aligned_cols=155 Identities=16% Similarity=0.220 Sum_probs=96.5
Q ss_pred HHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCC
Q 024788 77 IQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA 154 (262)
Q Consensus 77 V~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~ 154 (262)
+.+.+-.+...- .-.+||.+|..+......++.+...+..|||+.+ ++-+..+++..-.+--+..+|+. .+|+..
T Consensus 11 ~~~~~~~~~~~~--~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~ 87 (209)
T 2p8j_A 11 LYRFLKYCNESN--LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKD 87 (209)
T ss_dssp HHHHHHHHHHSS--SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCT
T ss_pred HHHHHHHHhccC--CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCC
Confidence 445555554332 2358999999988876666677777888888754 33344443322112235567774 467778
Q ss_pred CCccEEEecccccccChhhhccccccchhhcc-CceEEEecC-CcchhhhHH-hhh-------hcCCcc--ccccchhHH
Q 024788 155 KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGY-PGQQRAKVA-ELS-------KFGRPA--KMRSSSWWI 222 (262)
Q Consensus 155 kSFslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~-Pgqqrakva-els-------kfgrpa--K~rsssWW~ 222 (262)
.+|++|+.++.+.|+++....+.|.++.|+-. +|.++++-+ +.+.+.... .+. .-+.|. ..-+...|.
T Consensus 88 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 167 (209)
T 2p8j_A 88 ESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEAD 167 (209)
T ss_dssp TCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHH
T ss_pred CceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHH
Confidence 89999999999999998889999999998755 567776652 222221100 000 112222 344556677
Q ss_pred HHHHHhccccch
Q 024788 223 RYFVQTSLEENE 234 (262)
Q Consensus 223 r~F~qt~LeEnE 234 (262)
++|.+.++.+.|
T Consensus 168 ~~~~~~g~~~~~ 179 (209)
T 2p8j_A 168 KYFKDMKVLFKE 179 (209)
T ss_dssp HTTTTSEEEEEE
T ss_pred HHHhhcCceeee
Confidence 788877775544
No 8
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.53 E-value=6.8e-05 Score=59.37 Aligned_cols=137 Identities=12% Similarity=0.054 Sum_probs=90.6
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhh-hhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL-VHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsL-vrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
-.+||.||-.+......|++....+..|||+.+ ++-+..+++.. ..+--+..+|+. .+|....+|++||..++|.|
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ-DFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGG-GCCCCSSCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChh-hcCCCCCCEEEEEEcchhhh
Confidence 358999999999998888887766888988643 34444444432 112235566753 45666779999999999999
Q ss_pred cChhhhccccccchhhcc-CceEEEecCCcchhhhHHhhhhcCCccccccchhHHHHHHHhccccc
Q 024788 169 LSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEEN 233 (262)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeEn 233 (262)
+.+..+.+.|-++.|+-. +|.++++..-... .++-.-....-.++..-|.+.|.++|++.-
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE----GVILDDVDSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS----SEEEETTTTEEEEBHHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC----cceecccCCcccCCHHHHHHHHHHcCCeEE
Confidence 998777888888888754 6777775421111 000000112234567778888888887654
No 9
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.51 E-value=0.00024 Score=52.57 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=81.5
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEec-cccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYL 169 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivS-DaLDyL 169 (262)
.-.+||.+|..+......|.+. ..+..|||+.+ ++-..++....+--+..+|+.- +|....+|++||.+ +.+.|+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~--~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDP--ILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGS
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCH--HHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhc
Confidence 4468999999998887777766 56777877643 1222222222223345667643 45667899999998 899999
Q ss_pred Chhhhccccccchhhcc-CceEEEecCCcchhhhHHhhhhcCCccccccchhHHHHHHHhcccc
Q 024788 170 SPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeE 232 (262)
++..+.+.|.++.|+-. +|.++++-.+.+. .+..-|.+.+.++|++.
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~----------------~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGRAVIGFGAGRG----------------WVFGDFLEVAERVGLEL 169 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEETTSS----------------CCHHHHHHHHHHHTEEE
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCC----------------cCHHHHHHHHHHcCCEE
Confidence 99888899999988754 5666665433221 34455666777776653
No 10
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.50 E-value=0.00022 Score=55.41 Aligned_cols=100 Identities=14% Similarity=0.110 Sum_probs=70.9
Q ss_pred ceeeeecCCcchhhhhcccccc-ccccccccccccchhHHHHhhhh----------hcceeeeeecCCCCCCCCCccEEE
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYDIEDADARCKSLVH----------KGIVRVADIKFPLPYRAKSFPLVI 161 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~-tEAWGVEPydied~d~~CKsLvr----------KGiVRvADIkfpLPYR~kSFslVi 161 (262)
.+||-||..+......|.+... .+..|||+.+ ++-..++...+ +--+..+|+. -+|....+|++|+
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFEQITGVDVSY--RSLEIAQERLDRLRLPRNQWERLQLIQGALT-YQDKRFHGYDAAT 107 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCSEEEEEESCH--HHHHHHHHHHTTCCCCHHHHTTEEEEECCTT-SCCGGGCSCSEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCH--HHHHHHHHHHHHhcCCcccCcceEEEeCCcc-cccccCCCcCEEe
Confidence 5999999999998888887643 6888988753 22223332221 2234556763 3455668999999
Q ss_pred ecccccccChhhhccccccchhhcc-CceEEEecC
Q 024788 162 VSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGY 195 (262)
Q Consensus 162 vSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~ 195 (262)
..++|.|+++..+.+.|-++.|+-. +|++|++-+
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 9999999998888899999998765 565555543
No 11
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.42 E-value=0.00027 Score=55.92 Aligned_cols=133 Identities=16% Similarity=0.097 Sum_probs=84.5
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCC-CCCCCCccEEEecccccccCh
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPL-PYRAKSFPLVIVSDALDYLSP 171 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpL-PYR~kSFslVivSDaLDyLsp 171 (262)
.+||.||-.+......|.+. ..+..||++.+ +.-..|+.. --+..+|+.-.+ |+...+|++|+.+++|.++.+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEE-GIESIGVDINE--DMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHH-TCCEEEECSCH--HHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred CeEEEEeCCCCHHHHHHHhC-CCcEEEEECCH--HHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 58999999998887666554 66788887743 222223322 122334543322 677899999999999999999
Q ss_pred hhhccccccchhhcc-CceEEEec-CCcchhhhHHhhhhcCCccccccchhHHHHHHHhcccc
Q 024788 172 KYLNKTLPDLARVAS-DGVLIFAG-YPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 172 ryLNkTLPeLaRvsa-dglViF~G-~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeE 232 (262)
..+.+.|-++.|+-. +|.++++- .|... ....+.--+..-....+..-|.+.+.++|++.
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIESPNPTSL-YSLINFYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEEECTTSH-HHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCCcchh-HHHHHHhcCccccccCCHHHHHHHHHHCCCeE
Confidence 899999999999766 55666654 33322 12222111112233445567788888888763
No 12
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.28 E-value=0.00061 Score=52.47 Aligned_cols=137 Identities=16% Similarity=0.220 Sum_probs=85.7
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGiVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
.-.+||.+|..+......|.+. ..+..|||+.+- .-..++.... +--+..+|+. .+|.. .+|++|+..++|.++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSRE--MRMIAKEKLPKEFSITEGDFL-SFEVP-TSIDTIVSTYAFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHH--HHHHHHHHSCTTCCEESCCSS-SCCCC-SCCSEEEEESCGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHH--HHHHHHHhCCCceEEEeCChh-hcCCC-CCeEEEEECcchhcC
Confidence 4468999999999887777766 668888887531 2222222222 2335556663 24544 999999999999999
Q ss_pred Chhhhccccccchhhc-cCceEEEec--CCc--chhhhHHhhhhcC--------CccccccchhHHHHHHHhcccc
Q 024788 170 SPKYLNKTLPDLARVA-SDGVLIFAG--YPG--QQRAKVAELSKFG--------RPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 170 spryLNkTLPeLaRvs-adglViF~G--~Pg--qqrakvaelskfg--------rpaK~rsssWW~r~F~qt~LeE 232 (262)
.....-+.|-++.|+- .+|.++++- .+. ..+.....+.+-| .+....+...|.+.+.++|++-
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 195 (220)
T 3hnr_A 120 TDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHV 195 (220)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEE
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEE
Confidence 8876555888888875 467777764 222 1111222222222 1112336677888888888753
No 13
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.27 E-value=0.00067 Score=51.62 Aligned_cols=135 Identities=19% Similarity=0.329 Sum_probs=86.1
Q ss_pred cccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeec-CCCCCCCCCccEEEecccccc
Q 024788 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIK-FPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIk-fpLPYR~kSFslVivSDaLDy 168 (262)
..-.+||.+|..+......|.+. ..+..|||+.+ +.-..++... .-+..+|+. +.+|+...+|++|+.++.|.+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~--~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFP--EAAEQAKEKL--DHVVLGDIETMDMPYEEEQFDCVIFGDVLEH 105 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSH--HHHHHHHTTS--SEEEESCTTTCCCCSCTTCEEEEEEESCGGG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHHhC--CcEEEcchhhcCCCCCCCccCEEEECChhhh
Confidence 34468999999999888888877 57888887643 1112222211 135667774 457888899999999999999
Q ss_pred cChhhhccccccchhhc-cCceEEEecCCcch-hhhHHhhh--hcC---------CccccccchhHHHHHHHhcccc
Q 024788 169 LSPKYLNKTLPDLARVA-SDGVLIFAGYPGQQ-RAKVAELS--KFG---------RPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~G~Pgqq-rakvaels--kfg---------rpaK~rsssWW~r~F~qt~LeE 232 (262)
+... .+.|-++.|+- .+|.++++- |... -....++. .+. ......+...|.+.+.++|++.
T Consensus 106 ~~~~--~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 179 (230)
T 3cc8_A 106 LFDP--WAVIEKVKPYIKQNGVILASI-PNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSI 179 (230)
T ss_dssp SSCH--HHHHHHTGGGEEEEEEEEEEE-ECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEE
T ss_pred cCCH--HHHHHHHHHHcCCCCEEEEEe-CCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeE
Confidence 9643 47777787764 467777654 2211 11111111 010 1124457788999999998863
No 14
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.27 E-value=0.0017 Score=51.59 Aligned_cols=148 Identities=21% Similarity=0.283 Sum_probs=91.5
Q ss_pred hhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCC
Q 024788 80 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKS 156 (262)
Q Consensus 80 aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLPYR~kS 156 (262)
..|+++..--..-.+||.||..+......|.+.. .+..|||+.+ ++.+..+++..- ..=-+..+|+. .+|+...+
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~ 87 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE-SLPFPDDS 87 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT-BCCSCTTC
T ss_pred cchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc-cCCCCCCc
Confidence 3455555555566789999999988776666554 5788888653 333333332211 11124567774 57888899
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEec--CCcch--hhhHHhhhhc--CCccccccchhHHHHHHHhc
Q 024788 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ--RAKVAELSKF--GRPAKMRSSSWWIRYFVQTS 229 (262)
Q Consensus 157 FslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqq--rakvaelskf--grpaK~rsssWW~r~F~qt~ 229 (262)
|++|+.++++.++. -+.+.|.++.|+- .+|.++++. .|+.. +.-...+... +......+...|.+.+.++|
T Consensus 88 fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 165 (239)
T 1xxl_A 88 FDIITCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQ 165 (239)
T ss_dssp EEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTT
T ss_pred EEEEEECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCC
Confidence 99999999999985 3467788888875 467777764 23221 1111111111 22234456677888888888
Q ss_pred cc
Q 024788 230 LE 231 (262)
Q Consensus 230 Le 231 (262)
++
T Consensus 166 f~ 167 (239)
T 1xxl_A 166 LA 167 (239)
T ss_dssp EE
T ss_pred Cc
Confidence 76
No 15
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.25 E-value=0.00047 Score=54.30 Aligned_cols=132 Identities=11% Similarity=0.174 Sum_probs=86.3
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrK--GiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.+||-||..+......|.+....+..|||+.+ ++-+..+++..--. =-+..+|+ ..+|+...+|++|+...++.+
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGAIYN 126 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESCSCC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecChHhh
Confidence 48999999999888888877666889998754 34455555433211 12566888 677888899999999999999
Q ss_pred cChhhhccccccchhhc-cCceEEEec---CCcchhhhHHhh-h-hcCCccccccchhHHHHHHHhccc
Q 024788 169 LSPKYLNKTLPDLARVA-SDGVLIFAG---YPGQQRAKVAEL-S-KFGRPAKMRSSSWWIRYFVQTSLE 231 (262)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~G---~Pgqqrakvael-s-kfgrpaK~rsssWW~r~F~qt~Le 231 (262)
+.+ .+.|-++.|+- .+|.++++. .+........+. . .+ ..+.+..-|.+.+.++|++
T Consensus 127 ~~~---~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~aGf~ 189 (257)
T 3f4k_A 127 IGF---ERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAY---PEISVIPTCIDKMERAGYT 189 (257)
T ss_dssp CCH---HHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHC---TTCCBHHHHHHHHHHTTEE
T ss_pred cCH---HHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhC---CCCCCHHHHHHHHHHCCCe
Confidence 954 56788888854 567777664 111111111111 1 11 1256667777777777764
No 16
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.24 E-value=0.00011 Score=57.60 Aligned_cols=137 Identities=16% Similarity=0.194 Sum_probs=90.8
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
-.+||.||..+......|.+.-..+..|||+.+ ++-+..+++.. .+=-+..+|+.- +|+...+|++|+..+++.|+
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILT-KEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTT-CCCCTTCEEEEEEESCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECcccc-CCCCCCcEEEEeHHHHHHhc
Confidence 358999999998888888776567888887754 22222222222 112245567643 47778999999999999999
Q ss_pred Chhhhccccccchhhcc-CceEEEecCCcch----hhh-HHhhhhcCCccccccchhHHHHHHHhcccc
Q 024788 170 SPKYLNKTLPDLARVAS-DGVLIFAGYPGQQ----RAK-VAELSKFGRPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G~Pgqq----rak-vaelskfgrpaK~rsssWW~r~F~qt~LeE 232 (262)
++....+.|.++.|+-. +|.++++...... ... ...+...| ..+.+...|.+.+.++|++.
T Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~Gf~~ 200 (266)
T 3ujc_A 134 SLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRK--YTLITVEEYADILTACNFKN 200 (266)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHT--CCCCCHHHHHHHHHHTTCEE
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCC--CCCCCHHHHHHHHHHcCCeE
Confidence 99999999999999765 5677776521111 111 11122222 23567788888888888863
No 17
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.22 E-value=0.00015 Score=57.34 Aligned_cols=107 Identities=18% Similarity=0.192 Sum_probs=73.9
Q ss_pred hHHHHHhcc-ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh--hcceeeeeecCCCCCCCCCcc
Q 024788 82 PILKKAYGD-SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFP 158 (262)
Q Consensus 82 P~LkkaYGd-sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr--KGiVRvADIkfpLPYR~kSFs 158 (262)
+.|.+..++ .-.+||-+|..+..+...|++....+..|||+.+ +.-..++.... +--+..+|+. .+|+...+|+
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD 110 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSE--RMLTEAKRKTTSPVVCYEQKAIE-DIAIEPDAYN 110 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHHCCCTTEEEEECCGG-GCCCCTTCEE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCH--HHHHHHHHhhccCCeEEEEcchh-hCCCCCCCeE
Confidence 344444443 4468999999999888888877655888888753 22222333222 2234567774 5777789999
Q ss_pred EEEecccccccChhhhccccccchhh-ccCceEEEe
Q 024788 159 LVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 159 lVivSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (262)
+|+.+++|.|+ ..+.+.|-++.|+ ..+|.++++
T Consensus 111 ~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 111 VVLSSLALHYI--ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEchhhhhh--hhHHHHHHHHHHHcCCCcEEEEE
Confidence 99999999999 3467888888885 456777775
No 18
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=97.19 E-value=0.001 Score=50.28 Aligned_cols=111 Identities=12% Similarity=0.184 Sum_probs=76.2
Q ss_pred hhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc--ceeeeeecCCCCCCCCC
Q 024788 81 IPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKS 156 (262)
Q Consensus 81 iP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIkfpLPYR~kS 156 (262)
+..+.+..+..-.+||.+|..+......|.+....+..|||+.+ ++.+..+++..--.. -+..+|+. .+|+...+
T Consensus 33 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~ 111 (219)
T 3dlc_A 33 AENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH-NIPIEDNY 111 (219)
T ss_dssp HHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT-BCSSCTTC
T ss_pred HHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH-HCCCCccc
Confidence 34444555544449999999999988888877677888888643 333444433321111 23566763 46777899
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEec
Q 024788 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 157 FslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (262)
|++|+..+.|.|+ ....+.|.++.|+- .+|.++++.
T Consensus 112 ~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 112 ADLIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp EEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 9999999999998 34567888888864 567777765
No 19
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.09 E-value=0.0013 Score=51.24 Aligned_cols=149 Identities=16% Similarity=0.191 Sum_probs=90.7
Q ss_pred hhhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhh-c-ceeeeeecCCCCCCCCC
Q 024788 79 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G-IVRVADIKFPLPYRAKS 156 (262)
Q Consensus 79 ~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK-G-iVRvADIkfpLPYR~kS 156 (262)
..++.|++.-.. -.+||.||..+-.....|.+. ..+..|||+.+ +.-..++..... + -+..+|+. .+|+...+
T Consensus 42 ~~~~~l~~~~~~-~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~ 116 (242)
T 3l8d_A 42 TIIPFFEQYVKK-EAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISE--VMIQKGKERGEGPDLSFIKGDLS-SLPFENEQ 116 (242)
T ss_dssp THHHHHHHHSCT-TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHTTTCBTTEEEEECBTT-BCSSCTTC
T ss_pred HHHHHHHHHcCC-CCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHhhcccCCceEEEcchh-cCCCCCCC
Confidence 455666655443 358999999998887777766 56788887643 222223222111 1 23456664 46777899
Q ss_pred ccEEEecccccccChhhhccccccchhhcc-CceEEEec-CCcchhhhHHhhhhcCCcc--ccccchhHHHHHHHhcccc
Q 024788 157 FPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG-YPGQQRAKVAELSKFGRPA--KMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 157 FslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G-~Pgqqrakvaelskfgrpa--K~rsssWW~r~F~qt~LeE 232 (262)
|++|+..+.|.++. ...+.|-++.|+-. +|.++++- .|........-...++.+. ...+...|.+.+.++|++.
T Consensus 117 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 117 FEAIMAINSLEWTE--EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp EEEEEEESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred ccEEEEcChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 99999999999984 33467888888765 56666654 2322211111112233332 3345567888899988875
Q ss_pred ch
Q 024788 233 NE 234 (262)
Q Consensus 233 nE 234 (262)
-+
T Consensus 195 ~~ 196 (242)
T 3l8d_A 195 VD 196 (242)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 20
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.08 E-value=0.00089 Score=50.90 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=67.9
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhc----ceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG----IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKG----iVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.+||.+|..+..+...|.+. ..+..|||+.+ +.-..++. +| -+..+|+.-. ....+|++|+.+++|.|
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~--~~~~~a~~---~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~ 119 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGL-ADRVTALDGSA--EMIAEAGR---HGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAH 119 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHH-SSEEEEEESCH--HHHHHHGG---GCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGG
T ss_pred CeEEEECCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHh---cCCCCeEEEecccccC--CCCCceeEEEEechhhc
Confidence 38999999998877777666 56888887643 12222222 33 2445666443 56789999999999999
Q ss_pred cChhhhccccccchhhcc-CceEEEec
Q 024788 169 LSPKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~G 194 (262)
+.+..+.+.|-++.|+-. +|.++++.
T Consensus 120 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 999888888999988765 56666665
No 21
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=96.99 E-value=0.0027 Score=48.72 Aligned_cols=95 Identities=12% Similarity=0.114 Sum_probs=64.1
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEecccccccCh
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGiVRvADIkfpLPYR~kSFslVivSDaLDyLsp 171 (262)
.+||.||..|......|.+.. .+..|||+.+ +.-..++.... +--+..+|+.-. .-..+|++|+.+++|.|+..
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~--~~~~~a~~~~~~~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHF-NDITCVEASE--EAISHAQGRLKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTC-SCEEEEESCH--HHHHHHHHHSCSCEEEEESCGGGC--CCSSCEEEEEEESCGGGCSS
T ss_pred CcEEEECCCCCHHHHHHHHhC-CcEEEEeCCH--HHHHHHHHhhhCCeEEEEccHHHc--CcCCcccEEEEhhHHHhhcC
Confidence 479999999998877776654 4788887753 12222332222 223455676543 24688999999999999953
Q ss_pred hhhccccccch-hhcc-CceEEEec
Q 024788 172 KYLNKTLPDLA-RVAS-DGVLIFAG 194 (262)
Q Consensus 172 ryLNkTLPeLa-Rvsa-dglViF~G 194 (262)
..+.|-++. |+-. +|.++++-
T Consensus 119 --~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 119 --PVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp --HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHhcCCCCEEEEEc
Confidence 257888888 8754 57777665
No 22
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=96.97 E-value=0.0014 Score=50.84 Aligned_cols=97 Identities=22% Similarity=0.335 Sum_probs=66.1
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEec-cccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYL 169 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivS-DaLDyL 169 (262)
.+||.+|..+......|++. .+..|||+.+ ++-+..+++..-.+--+..+|+. .+|.. .+|++||.. |.+.|+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMR-ELELP-EPVDAITILCDSLNYL 110 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGG-GCCCS-SCEEEEEECTTGGGGC
T ss_pred CeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChh-hcCCC-CCcCEEEEeCCchhhc
Confidence 68999999998877777766 7888988753 33333333322112234456663 23333 789999987 699999
Q ss_pred -Chhhhccccccchhh-ccCceEEEe
Q 024788 170 -SPKYLNKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 170 -spryLNkTLPeLaRv-sadglViF~ 193 (262)
++.-+.+.|-++.|+ ..+|.+++.
T Consensus 111 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 677788888888887 456777764
No 23
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.91 E-value=0.00056 Score=52.40 Aligned_cols=100 Identities=16% Similarity=0.300 Sum_probs=69.6
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---------eeeeeecCCCCCCCCCccEE
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---------VRVADIKFPLPYRAKSFPLV 160 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi---------VRvADIkfpLPYR~kSFslV 160 (262)
.-.+||.+|..+..+...|++. ..+..|||+.+ +.-..++...+ .|+ +..+|+. .+|+...+|++|
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v 105 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK-GYSVTGIDINS--EAIRLAETAARSPGLNQKTGGKAEFKVENAS-SLSFHDSSFDFA 105 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHTTCCSCCSSSSCEEEEEECCTT-SCCSCTTCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCH--HHHHHHHHHHHhcCCccccCcceEEEEeccc-ccCCCCCceeEE
Confidence 3458999999999888777776 56788887642 12222332222 232 4456664 467778999999
Q ss_pred EecccccccC-hhhhccccccchhhc-cCceEEEec
Q 024788 161 IVSDALDYLS-PKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 161 ivSDaLDyLs-pryLNkTLPeLaRvs-adglViF~G 194 (262)
+.++.|.++. |...-+.|.++.|+- .+|.++++.
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9999999994 676667888888865 467777765
No 24
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.90 E-value=0.0027 Score=51.41 Aligned_cols=138 Identities=13% Similarity=0.128 Sum_probs=88.7
Q ss_pred HhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc-----eeeeeecCCCCCCCCCccE
Q 024788 87 AYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVADIKFPLPYRAKSFPL 159 (262)
Q Consensus 87 aYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi-----VRvADIkfpLPYR~kSFsl 159 (262)
.++..-.+||-||..+......|.+. ..+..|||+.+ ++-+..+++. .|+ +..+|+.-..++-..+|++
T Consensus 64 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~~~~~~~~fD~ 139 (285)
T 4htf_A 64 EMGPQKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEA---KGVSDNMQFIHCAAQDVASHLETPVDL 139 (285)
T ss_dssp HTCSSCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC----CCGGGEEEEESCGGGTGGGCSSCEEE
T ss_pred hcCCCCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh---cCCCcceEEEEcCHHHhhhhcCCCceE
Confidence 34444568999999999887777766 67889998753 2333333322 233 5667776544477899999
Q ss_pred EEecccccccChhhhccccccchhhcc-CceEEEecCCcchhhhH--------Hhhhh--------cCCccccccchhHH
Q 024788 160 VIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKV--------AELSK--------FGRPAKMRSSSWWI 222 (262)
Q Consensus 160 VivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~Pgqqrakv--------aelsk--------fgrpaK~rsssWW~ 222 (262)
|+..+.|.|+.. ..+.|-++.|+-. +|+++++- |....... ..+.. ...+....+...|.
T Consensus 140 v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 216 (285)
T 4htf_A 140 ILFHAVLEWVAD--PRSVLQTLWSVLRPGGVLSLMF-YNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVY 216 (285)
T ss_dssp EEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEE-EBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHH
T ss_pred EEECchhhcccC--HHHHHHHHHHHcCCCeEEEEEE-eCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHH
Confidence 999999999953 3678888888766 45665554 32221100 01100 11223556778899
Q ss_pred HHHHHhccc
Q 024788 223 RYFVQTSLE 231 (262)
Q Consensus 223 r~F~qt~Le 231 (262)
+.+.++|++
T Consensus 217 ~~l~~aGf~ 225 (285)
T 4htf_A 217 LWLEEAGWQ 225 (285)
T ss_dssp HHHHHTTCE
T ss_pred HHHHHCCCc
Confidence 999999987
No 25
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.81 E-value=0.0023 Score=49.20 Aligned_cols=130 Identities=18% Similarity=0.157 Sum_probs=85.6
Q ss_pred ceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvr-KGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
.+||.+|..+......|++.. +.+.+|||+.+ ++.+..+++..-- +--+..+|+ ..+|+...+|++|+.++.+.
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 117 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIPLPDNTVDFIFMAFTFH 117 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCSSCSSCEEEEEEESCGG
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCCCCCCCeeEEEeehhhh
Confidence 489999999998888888765 57899998643 3334444332211 122455666 35677788999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEecCCcchhhhHHhhhhcCCc-cccccchhHHHHHHHhcccc
Q 024788 168 YLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKFGRP-AKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G~Pgqqrakvaelskfgrp-aK~rsssWW~r~F~qt~LeE 232 (262)
++. ...+.|-++.|+- .+|.++++..-.... .++.+ ....+..-|.+.+.++|++.
T Consensus 118 ~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~Gf~~ 175 (219)
T 3dh0_A 118 ELS--EPLKFLEELKRVAKPFAYLAIIDWKKEER-------DKGPPPEEVYSEWEVGLILEDAGIRV 175 (219)
T ss_dssp GCS--SHHHHHHHHHHHEEEEEEEEEEEECSSCC-------SSSCCGGGSCCHHHHHHHHHHTTCEE
T ss_pred hcC--CHHHHHHHHHHHhCCCeEEEEEEeccccc-------ccCCchhcccCHHHHHHHHHHCCCEE
Confidence 994 3467788888864 467888775222111 11221 22335667888888888874
No 26
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=96.80 E-value=0.0034 Score=50.80 Aligned_cols=134 Identities=13% Similarity=0.160 Sum_probs=84.8
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccCh
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLsp 171 (262)
-.+||-||..+-.....|.+ ...+..|||+.+- .-..++.....--+.++|+.- +|+ ..+|++|+.+++|.++.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~d~~~-~~~-~~~fD~v~~~~~l~~~~- 131 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAAT--MIEKARQNYPHLHFDVADARN-FRV-DKPLDAVFSNAMLHWVK- 131 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHH--HHHHHHHHCTTSCEEECCTTT-CCC-SSCEEEEEEESCGGGCS-
T ss_pred CCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHH--HHHHHHhhCCCCEEEECChhh-CCc-CCCcCEEEEcchhhhCc-
Confidence 35899999999888777776 6678889887531 111122211233467788754 666 68999999999999985
Q ss_pred hhhccccccchhhcc-CceEEEec-CCcch---hhhHH-hhhhcC-------CccccccchhHHHHHHHhcccc
Q 024788 172 KYLNKTLPDLARVAS-DGVLIFAG-YPGQQ---RAKVA-ELSKFG-------RPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 172 ryLNkTLPeLaRvsa-dglViF~G-~Pgqq---rakva-elskfg-------rpaK~rsssWW~r~F~qt~LeE 232 (262)
...+.|.++.|+-. +|.++++- .++.. ..... .+.+.| .|....+...|.+.+.++|++.
T Consensus 132 -d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 204 (279)
T 3ccf_A 132 -EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDV 204 (279)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEE
T ss_pred -CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEE
Confidence 24577888888866 56666543 22221 11111 122333 2344556777888888887753
No 27
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=96.78 E-value=0.0017 Score=51.02 Aligned_cols=137 Identities=12% Similarity=0.070 Sum_probs=85.1
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhh-----------------------------hhhc-
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL-----------------------------VHKG- 139 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsL-----------------------------vrKG- 139 (262)
-.+||.+|-.+......|.+....+..||++.+ ++.+..+++.. ++..
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v 136 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAI 136 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHE
T ss_pred CCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhh
Confidence 358999999996555444444434778887643 23232222211 0000
Q ss_pred -ceeeeeecCCCCCCC---CCccEEEecccccccChh--hhccccccchhh-ccCceEEEecCCcchhhhHHhhhhcCC-
Q 024788 140 -IVRVADIKFPLPYRA---KSFPLVIVSDALDYLSPK--YLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAELSKFGR- 211 (262)
Q Consensus 140 -iVRvADIkfpLPYR~---kSFslVivSDaLDyLspr--yLNkTLPeLaRv-sadglViF~G~Pgqqrakvaelskfgr- 211 (262)
-+..+|+.-..|.-+ .+|++||.+.+|.++.|. .+.+.|-++.|+ ..+|.+|++...+.. ....|.
T Consensus 137 ~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~------~~~~~~~ 210 (265)
T 2i62_A 137 KQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS------YYMIGEQ 210 (265)
T ss_dssp EEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC------EEEETTE
T ss_pred eeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc------eEEcCCc
Confidence 256678876666555 899999999999988776 677788888886 457788887744431 111121
Q ss_pred --ccccccchhHHHHHHHhccccch
Q 024788 212 --PAKMRSSSWWIRYFVQTSLEENE 234 (262)
Q Consensus 212 --paK~rsssWW~r~F~qt~LeEnE 234 (262)
....-+...|.+.|.++|++.-+
T Consensus 211 ~~~~~~~~~~~~~~~l~~aGf~~~~ 235 (265)
T 2i62_A 211 KFSSLPLGWETVRDAVEEAGYTIEQ 235 (265)
T ss_dssp EEECCCCCHHHHHHHHHHTTCEEEE
T ss_pred cccccccCHHHHHHHHHHCCCEEEE
Confidence 11222445889999999986543
No 28
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.77 E-value=0.0017 Score=50.56 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=69.4
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
.-.+||.||..+......|++.- ..+..|||+.+ ++.+..+++..- +--+..+|+. .+|.. .+|++|+.+++|.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~-~~~~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYS-KYDFE-EKYDMVVSALSIH 120 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTT-TCCCC-SCEEEEEEESCGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchh-ccCCC-CCceEEEEeCccc
Confidence 34789999999998888777664 67888888743 222333322211 2234456663 33444 8999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEec
Q 024788 168 YLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G 194 (262)
++++.-.-..|-++.|+- .+|.++++-
T Consensus 121 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 998777667888888864 467777654
No 29
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.76 E-value=0.0051 Score=48.94 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=83.5
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
.-.+||-||..+-.+...|.+.. .+..||++.+ ++-+..+++..- ..--+.++|+. .+|+...+|++|+...+|.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hCCCCCCCEEEEEEhhhhH
Confidence 34689999999888776666554 4888888653 333333332110 11124567774 3677788999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEec--CCcch--hhhHHhhhhcC--CccccccchhHHHHHHHhccc
Q 024788 168 YLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ--RAKVAELSKFG--RPAKMRSSSWWIRYFVQTSLE 231 (262)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G--~Pgqq--rakvaelskfg--rpaK~rsssWW~r~F~qt~Le 231 (262)
++. ...+.|.++.|+- .+|.++++. .|+.. +.-...+.++. ......+..-|.+.+.++|++
T Consensus 115 ~~~--d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 183 (260)
T 1vl5_A 115 HFP--NPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFE 183 (260)
T ss_dssp GCS--CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCE
T ss_pred hcC--CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCe
Confidence 995 3357888999875 467887763 44431 11111111111 123345556677777777765
No 30
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.75 E-value=0.0032 Score=48.52 Aligned_cols=103 Identities=19% Similarity=0.311 Sum_probs=69.1
Q ss_pred hccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecc-
Q 024788 88 YGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSD- 164 (262)
Q Consensus 88 YGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSD- 164 (262)
++..-.+||.+|..+......|.+. ..+..|||+.+ ++-+..+++..-.+--+..+|+. .+|.. .+|++||.+.
T Consensus 34 ~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~ 110 (246)
T 1y8c_A 34 NNLVFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NLNIN-RKFDLITCCLD 110 (246)
T ss_dssp TTCCTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GCCCS-CCEEEEEECTT
T ss_pred hCCCCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cCCcc-CCceEEEEcCc
Confidence 3445579999999999988877766 45678887643 23333333221102234456663 23433 7899999996
Q ss_pred ccccc-Chhhhccccccchhhc-cCceEEEe
Q 024788 165 ALDYL-SPKYLNKTLPDLARVA-SDGVLIFA 193 (262)
Q Consensus 165 aLDyL-spryLNkTLPeLaRvs-adglViF~ 193 (262)
+|.|+ ++..+.+.|-++.|+- .+|.+++.
T Consensus 111 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999 6678888999999875 46777764
No 31
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=96.71 E-value=0.0033 Score=50.75 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=69.6
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
-.+||.||-.+......|.++-..+..||++.+ ++-+..+++..- .+--+..+|+ ..+| .+|++|+..++|.
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~---~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW-EQFD---EPVDRIVSIGAFE 140 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG-GGCC---CCCSEEEEESCGG
T ss_pred cCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECCh-hhCC---CCeeEEEEeCchh
Confidence 358999999998888778766556888887643 222333332110 1112456777 3566 8999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEec
Q 024788 168 YLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~G 194 (262)
++.+....+.|-++.|+-. +|.+++..
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9998888899999999754 66666654
No 32
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.69 E-value=0.013 Score=45.74 Aligned_cols=140 Identities=18% Similarity=0.218 Sum_probs=84.5
Q ss_pred hhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccE
Q 024788 80 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPL 159 (262)
Q Consensus 80 aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFsl 159 (262)
.+..|++.-. -.+||.||..+......|.+. .|||+.+ +.-..|+.. .--+..+|+. .+|+...+|++
T Consensus 38 ~~~~l~~~~~--~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~--~~~~~a~~~--~~~~~~~d~~-~~~~~~~~fD~ 105 (219)
T 1vlm_A 38 ELQAVKCLLP--EGRGVEIGVGTGRFAVPLKIK-----IGVEPSE--RMAEIARKR--GVFVLKGTAE-NLPLKDESFDF 105 (219)
T ss_dssp HHHHHHHHCC--SSCEEEETCTTSTTHHHHTCC-----EEEESCH--HHHHHHHHT--TCEEEECBTT-BCCSCTTCEEE
T ss_pred HHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHH-----hccCCCH--HHHHHHHhc--CCEEEEcccc-cCCCCCCCeeE
Confidence 3444544433 458999999998887777765 7776543 111222221 2234456663 46777889999
Q ss_pred EEecccccccChhhhccccccchhhcc-CceEEEecCCcc-hhhhHHh-h---hhcCCccccccchhHHHHHHHhccccc
Q 024788 160 VIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQ-QRAKVAE-L---SKFGRPAKMRSSSWWIRYFVQTSLEEN 233 (262)
Q Consensus 160 VivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~Pgq-qrakvae-l---skfgrpaK~rsssWW~r~F~qt~LeEn 233 (262)
||..+.|.|+.. ..+.|-++.|+-. +|.++++..+.+ ......+ + ..+.......+..-|.+.+.++|++.-
T Consensus 106 v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 106 ALMVTTICFVDD--PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp EEEESCGGGSSC--HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred EEEcchHhhccC--HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 999999999842 3567778887754 567776653322 1111111 1 122233455577778888888888653
No 33
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=96.65 E-value=0.0068 Score=48.36 Aligned_cols=105 Identities=20% Similarity=0.265 Sum_probs=72.6
Q ss_pred HHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-----ceeeeeecCCCCC-CCCCc
Q 024788 86 KAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-----IVRVADIKFPLPY-RAKSF 157 (262)
Q Consensus 86 kaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-----iVRvADIkfpLPY-R~kSF 157 (262)
+.+-..=.+||.+|..+......|.+....+..|||+.+ ++-+..+++ +.| -+..+|+. .+|+ ...+|
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~---~~~~~~~v~~~~~d~~-~~~~~~~~~f 134 (298)
T 1ri5_A 59 RLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRAR---NMKRRFKVFFRAQDSY-GRHMDLGKEF 134 (298)
T ss_dssp HHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHH---TSCCSSEEEEEESCTT-TSCCCCSSCE
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH---hcCCCccEEEEECCcc-ccccCCCCCc
Confidence 344445568999999998887777776666888988653 222333332 222 23456663 2355 57899
Q ss_pred cEEEecccccc--cChhhhccccccchhhcc-CceEEEec
Q 024788 158 PLVIVSDALDY--LSPKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 158 slVivSDaLDy--LspryLNkTLPeLaRvsa-dglViF~G 194 (262)
++||..++|.| .++..+.+.|-++.|+-. +|.+|++-
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99999999998 678888889999998765 56666654
No 34
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.60 E-value=0.0035 Score=51.68 Aligned_cols=138 Identities=7% Similarity=0.056 Sum_probs=85.7
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
-.+||.||-.+-.....|.+.-..+..|||+.+ ++-+..+++..- .+--+..+|+ ..+| .+|++|+..+++.
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~---~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW-EDFA---EPVDRIVSIEAFE 166 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG-GGCC---CCCSEEEEESCGG
T ss_pred cCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCh-HHCC---CCcCEEEEeChHH
Confidence 358999999998777777765455788887642 222333322210 0112345666 3445 7899999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEec-CCcchhhh--------------HHhhhhcCCc-cccccchhHHHHHHHhcc
Q 024788 168 YLSPKYLNKTLPDLARVA-SDGVLIFAG-YPGQQRAK--------------VAELSKFGRP-AKMRSSSWWIRYFVQTSL 230 (262)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G-~Pgqqrak--------------vaelskfgrp-aK~rsssWW~r~F~qt~L 230 (262)
|+.+..+.+.|-++.|+- .+|.++++- .+...... ..-+.+.--| ..+.+..-|.+.+.++|+
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf 246 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGF 246 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTC
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCC
Confidence 999888899999999875 466766654 22211110 0111221112 245677888888888888
Q ss_pred ccc
Q 024788 231 EEN 233 (262)
Q Consensus 231 eEn 233 (262)
+.-
T Consensus 247 ~~~ 249 (318)
T 2fk8_A 247 TVP 249 (318)
T ss_dssp BCC
T ss_pred EEE
Confidence 644
No 35
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.59 E-value=0.0025 Score=51.58 Aligned_cols=102 Identities=10% Similarity=0.061 Sum_probs=71.3
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
-.+||.+|-.+......|.+. ..+..|||+.+ ++-+..+++..--+--+..+|+.-. |. ..+|++||.+..+.|+
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAA-NI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGC-CC-CSCEEEEEECSSGGGS
T ss_pred CCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccc-cc-cCCccEEEEccchhhC
Confidence 468999999998877777666 55888887653 3334444432211223555677532 33 8899999999999999
Q ss_pred Chhhhccccccchhhcc-CceEEEecCC
Q 024788 170 SPKYLNKTLPDLARVAS-DGVLIFAGYP 196 (262)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G~P 196 (262)
++..+.+.|.++.|+-. +|++++....
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 99999999999988754 6775655433
No 36
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=96.45 E-value=0.0056 Score=48.83 Aligned_cols=111 Identities=16% Similarity=0.181 Sum_probs=75.8
Q ss_pred HHhhhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCC
Q 024788 77 IQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKS 156 (262)
Q Consensus 77 V~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kS 156 (262)
....+..|.+... .-.+||.||-.+......|.+. ..+..|||+.+ +.-..++....+--+..+|+.- +|. ..+
T Consensus 37 ~~~~~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~d~~~-~~~-~~~ 110 (263)
T 3pfg_A 37 AADLAALVRRHSP-KAASLLDVACGTGMHLRHLADS-FGTVEGLELSA--DMLAIARRRNPDAVLHHGDMRD-FSL-GRR 110 (263)
T ss_dssp HHHHHHHHHHHCT-TCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCH--HHHHHHHHHCTTSEEEECCTTT-CCC-SCC
T ss_pred HHHHHHHHHhhCC-CCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHhhCCCCEEEECChHH-CCc-cCC
Confidence 3344455554433 3468999999999988888776 45778887642 2233333333333456677743 455 789
Q ss_pred ccEEEecc-ccccc-Chhhhccccccchhhc-cCceEEEe
Q 024788 157 FPLVIVSD-ALDYL-SPKYLNKTLPDLARVA-SDGVLIFA 193 (262)
Q Consensus 157 FslVivSD-aLDyL-spryLNkTLPeLaRvs-adglViF~ 193 (262)
|++||.+. +|.|+ +|..+.+.|-++.|+- .+|.+++.
T Consensus 111 fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 111 FSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999997 99999 5677888899999875 56777775
No 37
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.45 E-value=0.0023 Score=46.98 Aligned_cols=109 Identities=13% Similarity=0.119 Sum_probs=73.0
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
-.+||.+|..+..+...|.+ ...+..|||+.+ ++-+..+++..- .+--+..+|+.-++ ...+|++|+..+.
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~i~~~~~--- 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVL--DKLEFNKAFIGGT--- 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHG--GGCCCSEEEECSC---
T ss_pred CCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccc--cCCCCcEEEECCc---
Confidence 35899999999888887777 777888888653 333444443221 11123456665444 4479999999887
Q ss_pred cChhhhccccccchhhccCceEEEec-CCcchhhhHHhhhhcC
Q 024788 169 LSPKYLNKTLPDLARVASDGVLIFAG-YPGQQRAKVAELSKFG 210 (262)
Q Consensus 169 LspryLNkTLPeLaRvsadglViF~G-~Pgqqrakvaelskfg 210 (262)
..+.+.|.++.|+ .+|.++++. .+.+...-...+.+.|
T Consensus 110 ---~~~~~~l~~~~~~-~gG~l~~~~~~~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 110 ---KNIEKIIEILDKK-KINHIVANTIVLENAAKIINEFESRG 148 (183)
T ss_dssp ---SCHHHHHHHHHHT-TCCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred ---ccHHHHHHHHhhC-CCCEEEEEecccccHHHHHHHHHHcC
Confidence 4556778889999 999999887 4444444445555555
No 38
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.43 E-value=0.0053 Score=47.42 Aligned_cols=110 Identities=15% Similarity=0.277 Sum_probs=73.5
Q ss_pred hhhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCcc
Q 024788 79 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (262)
Q Consensus 79 ~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFs 158 (262)
....+|++.. ..-.+||.+|..+......|.+... +..|||+.+ +.-..++....+--+..+|+. .+|. ..+|+
T Consensus 29 ~~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~-~~~~D 102 (239)
T 3bxo_A 29 DIADLVRSRT-PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSE--DMLTHARKRLPDATLHQGDMR-DFRL-GRKFS 102 (239)
T ss_dssp HHHHHHHHHC-TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCH--HHHHHHHHHCTTCEEEECCTT-TCCC-SSCEE
T ss_pred HHHHHHHHhc-CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCH--HHHHHHHHhCCCCEEEECCHH-Hccc-CCCCc
Confidence 3444555543 4456899999999988888776644 778877642 122223322222345566764 3455 78999
Q ss_pred EEE-eccccccc-Chhhhccccccchhhc-cCceEEEec
Q 024788 159 LVI-VSDALDYL-SPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 159 lVi-vSDaLDyL-spryLNkTLPeLaRvs-adglViF~G 194 (262)
+|+ ..+++.|+ +|..+.+.|-++.|+- .+|.++++-
T Consensus 103 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 103 AVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 999 56799998 5678888888888874 567887763
No 39
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.40 E-value=0.013 Score=49.05 Aligned_cols=116 Identities=16% Similarity=0.251 Sum_probs=81.4
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc---cccccccccccc--ccchhHHHHhhhhhcce--eeeeec
Q 024788 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE---EETEAWGVEPYD--IEDADARCKSLVHKGIV--RVADIK 147 (262)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE---e~tEAWGVEPyd--ied~d~~CKsLvrKGiV--RvADIk 147 (262)
.|+++.|-.|-+.|-..=.+||-+|-.|-...-.|++. .+.+.-||++.+ |+-|..+++..-...-| ..+|+.
T Consensus 54 ~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 54 SNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 45666666677777666678999999888776666543 455778887654 45555555543322233 346763
Q ss_pred CCCCCCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 024788 148 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 148 fpLPYR~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (262)
.+|+ .+|++|+...+|.|+.|....+.|-++.|+ ...|++|++
T Consensus 134 -~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 134 -DIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp -TCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -cccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 4565 469999999999999998877889999886 556777765
No 40
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.39 E-value=0.015 Score=46.26 Aligned_cols=139 Identities=21% Similarity=0.277 Sum_probs=83.6
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEecccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaL 166 (262)
.-.+||.||-.+-.....|.+.-..+..||++.+ ++-+..+++..- .+--+..+|+. .+|+...+|++|+..++|
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DLPFEDASFDAVWALESL 139 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCSCTTCEEEEEEESCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cCCCCCCCccEEEEechh
Confidence 3458999999998887777776567888887643 233333333211 11224456663 467778899999999999
Q ss_pred cccChhhhccccccchhhcc-CceEEEecC----Cc--chhhhHHhhhhcCCccccccchhHHHHHHHhcccc
Q 024788 167 DYLSPKYLNKTLPDLARVAS-DGVLIFAGY----PG--QQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 167 DyLspryLNkTLPeLaRvsa-dglViF~G~----Pg--qqrakvaelskfgrpaK~rsssWW~r~F~qt~LeE 232 (262)
.++... .+.|-++.|+-. +|.++++.. |- ..+..............+.+..-|.+.+.++|++.
T Consensus 140 ~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 210 (273)
T 3bus_A 140 HHMPDR--GRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVV 210 (273)
T ss_dssp TTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEE
T ss_pred hhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeE
Confidence 999533 577788888754 566666541 11 11111111111111224555566777777777653
No 41
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=96.36 E-value=0.0034 Score=48.62 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=66.5
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhh--cceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK--GiVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
-.+||.||..+..+...|++....+..|||+.+ +.-..++..... --+..+|+.- +|+...+|++||.++.|.++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSE--KMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGGC
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCH--HHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEecccccc
Confidence 358999999999888877776544888888652 222223322222 1244566643 56668899999999999998
Q ss_pred Chhhhccccccchhhc-cCceEEEec
Q 024788 170 SPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 170 spryLNkTLPeLaRvs-adglViF~G 194 (262)
. -+.+.|-++.|+- .+|.++++-
T Consensus 121 ~--~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 121 E--DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c--hHHHHHHHHHHhcCcCcEEEEEe
Confidence 5 3557778888864 466777653
No 42
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=96.34 E-value=0.0066 Score=48.98 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=69.9
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccC
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 170 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLs 170 (262)
.-.+||-||-.|-.....|.+ ...+..||++.+ ..-..++... .--+.++|+. .+|+...+|++|+...+|.++
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~--~~~~~a~~~~-~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~- 107 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSI--VMRQQAVVHP-QVEWFTGYAE-NLALPDKSVDGVISILAIHHF- 107 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCH--HHHHSSCCCT-TEEEECCCTT-SCCSCTTCBSEEEEESCGGGC-
T ss_pred CCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCH--HHHHHHHhcc-CCEEEECchh-hCCCCCCCEeEEEEcchHhhc-
Confidence 457899999999888777776 567899998765 1111111111 2234567774 578888999999999999998
Q ss_pred hhhhccccccchhhccCc-eEEEecCCc
Q 024788 171 PKYLNKTLPDLARVASDG-VLIFAGYPG 197 (262)
Q Consensus 171 pryLNkTLPeLaRvsadg-lViF~G~Pg 197 (262)
....+.|-++.|+-.+| ++|++-.|.
T Consensus 108 -~~~~~~l~~~~~~LkgG~~~~~~~~~~ 134 (261)
T 3ege_A 108 -SHLEKSFQEMQRIIRDGTIVLLTFDIR 134 (261)
T ss_dssp -SSHHHHHHHHHHHBCSSCEEEEEECGG
T ss_pred -cCHHHHHHHHHHHhCCcEEEEEEcCCc
Confidence 45568888899887777 555554443
No 43
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.33 E-value=0.038 Score=44.00 Aligned_cols=102 Identities=15% Similarity=0.121 Sum_probs=67.9
Q ss_pred ccceeeeecCCcchhhhhccccc--ccccccccccc--------ccchhHHHHhhh--hhcceeeee-e-cCCCCCCCCC
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--------IEDADARCKSLV--HKGIVRVAD-I-KFPLPYRAKS 156 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--------ied~d~~CKsLv--rKGiVRvAD-I-kfpLPYR~kS 156 (262)
.-.+||-||..+-.....|.+.- ..+.-||++.+ ++.+..+++..- .+=-+..+| + ...+|+...+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 122 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQH 122 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCC
Confidence 33589999999998888888763 27899999876 343444443211 111233455 3 3567888899
Q ss_pred ccEEEecccccccChhhhccccccchhhcc-CceEEEec
Q 024788 157 FPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 157 FslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (262)
|++|+..+.|.|+... ..-+-.+.++-. +|.++++-
T Consensus 123 fD~v~~~~~l~~~~~~--~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 123 FDRVVLAHSLWYFASA--NALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp CSEEEEESCGGGSSCH--HHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEEEccchhhCCCH--HHHHHHHHHHhCCCCEEEEEE
Confidence 9999999999998643 223334455555 88888864
No 44
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.33 E-value=0.0094 Score=43.99 Aligned_cols=100 Identities=12% Similarity=0.090 Sum_probs=67.8
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhh-cceeeeeecCCCCCCCCCccEEEecccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHK-GIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrK-GiVRvADIkfpLPYR~kSFslVivSDaL 166 (262)
.-.+||-+|..+......|.+.- ..+..|||+.+ ++-+..+++.+--. .++..+|..-++|.-..+|++|+.+..+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcc
Confidence 34589999999988877777663 67888998765 45555555443211 2344466655677655899999999988
Q ss_pred cccChhhhccccccchh-hccCceEEEecCC
Q 024788 167 DYLSPKYLNKTLPDLAR-VASDGVLIFAGYP 196 (262)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~G~P 196 (262)
.+ .+.+.++.| +..+|.+++....
T Consensus 105 ~~------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 105 TA------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp TC------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred cH------HHHHHHHHHhcCCCCEEEEEeec
Confidence 77 445556666 4567888887753
No 45
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=96.29 E-value=0.0044 Score=46.43 Aligned_cols=99 Identities=14% Similarity=0.188 Sum_probs=69.2
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvr-KGiVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
.+||.+|..+-.....|.+. ..+..|||+.+ ++.+..+.+..-- .--+..+|+.- +|+ ..+|++||.++.+.|+
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~l~~~ 110 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LTF-DRQYDFILSTVVLMFL 110 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CCC-CCCEEEEEEESCGGGS
T ss_pred CeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CCC-CCCceEEEEcchhhhC
Confidence 48999999998887777765 56788887643 3333333322110 11245567643 556 8899999999999999
Q ss_pred Chhhhccccccchhhc-cCceEEEec
Q 024788 170 SPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 170 spryLNkTLPeLaRvs-adglViF~G 194 (262)
++..+.+.|-++.|+- .+|.+++..
T Consensus 111 ~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 111 EAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9988889999998875 467755544
No 46
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=96.26 E-value=0.013 Score=47.52 Aligned_cols=138 Identities=14% Similarity=0.121 Sum_probs=84.9
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEecccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaL 166 (262)
.-.+||.||-.+......|++.-..+..||++.+ ++-+..+++..- .+=-+..+|+. .+|+...+|++|+..++|
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SCSSCTTCEEEEEEESCG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cCCCCCCCEeEEEecchh
Confidence 3458999999998888888776456788887653 233333333211 11124456763 578888999999999999
Q ss_pred cccChhhhccccccchhhcc-CceEEEecC--Ccc-hhhhHHh-hhhcCCccccccchhHHHHHHHhcccc
Q 024788 167 DYLSPKYLNKTLPDLARVAS-DGVLIFAGY--PGQ-QRAKVAE-LSKFGRPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 167 DyLspryLNkTLPeLaRvsa-dglViF~G~--Pgq-qrakvae-lskfgrpaK~rsssWW~r~F~qt~LeE 232 (262)
.++.. ..+.|-++.|+-. +|.++++.. +.. ....... ...++.| .+.+..-|.+.+.++|++.
T Consensus 161 ~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~aGf~~ 228 (297)
T 2o57_A 161 LHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLH-DMGSLGLYRSLAKECGLVT 228 (297)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCS-SCCCHHHHHHHHHHTTEEE
T ss_pred hhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCC-CCCCHHHHHHHHHHCCCeE
Confidence 99976 5788888998754 677777641 110 0011111 1222222 2445556667777776653
No 47
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=96.24 E-value=0.017 Score=47.60 Aligned_cols=148 Identities=14% Similarity=0.169 Sum_probs=88.5
Q ss_pred hHHHHHhc---cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhh-hhcc---e--eeeeecCCCC
Q 024788 82 PILKKAYG---DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---V--RVADIKFPLP 151 (262)
Q Consensus 82 P~LkkaYG---dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLv-rKGi---V--RvADIkfpLP 151 (262)
+-+-+.|. ..-.+||.||-.+......|++.- ..+..|++.- ++-..++..+ +.|+ | ...|+.- +|
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~ 228 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA---SVLEVAKENARIQGVASRYHTIAGSAFE-VD 228 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH---HHHHHHHHHHHHHTCGGGEEEEESCTTT-SC
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH---HHHHHHHHHHHhcCCCcceEEEeccccc-CC
Confidence 33444554 455799999999998888777653 4567777654 2222233222 2222 3 3455532 23
Q ss_pred CCCCCccEEEecccccccChhhhccccccchhhc-cCceEEEec-CCcchh-----hhHHhhhh--cCCccccccchhHH
Q 024788 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG-YPGQQR-----AKVAELSK--FGRPAKMRSSSWWI 222 (262)
Q Consensus 152 YR~kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G-~Pgqqr-----akvaelsk--fgrpaK~rsssWW~ 222 (262)
. ++.|++|+.++.|.|+++....+.|-++.|+- .+|.+++.- .+.+.. ...-++.- .....+.++..-|.
T Consensus 229 ~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 307 (335)
T 2r3s_A 229 Y-GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYE 307 (335)
T ss_dssp C-CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHH
T ss_pred C-CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHH
Confidence 3 23499999999999999888888888888864 567555543 322211 11111111 11134667788888
Q ss_pred HHHHHhccccch
Q 024788 223 RYFVQTSLEENE 234 (262)
Q Consensus 223 r~F~qt~LeEnE 234 (262)
+.+.++|++.-+
T Consensus 308 ~ll~~aGf~~~~ 319 (335)
T 2r3s_A 308 SMFSNAGFSHSQ 319 (335)
T ss_dssp HHHHHTTCSEEE
T ss_pred HHHHHCCCCeee
Confidence 888888876543
No 48
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=96.17 E-value=0.0048 Score=50.61 Aligned_cols=106 Identities=13% Similarity=0.127 Sum_probs=72.0
Q ss_pred HHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh----hhcceeeeeecCCCCCCCCCccE
Q 024788 86 KAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV----HKGIVRVADIKFPLPYRAKSFPL 159 (262)
Q Consensus 86 kaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv----rKGiVRvADIkfpLPYR~kSFsl 159 (262)
+..+..-.+||-||-.+......|++. ..+..|||+.+ ++-+..++...- .+=-+..+|+.- +|+ ..+|++
T Consensus 77 ~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~ 153 (299)
T 3g2m_A 77 TRTGPVSGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA-FAL-DKRFGT 153 (299)
T ss_dssp HHHCCCCSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB-CCC-SCCEEE
T ss_pred HhhCCCCCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc-CCc-CCCcCE
Confidence 334443349999999999988888776 56788887653 222333332210 111266778753 555 789999
Q ss_pred EEec-ccccccChhhhccccccchhhcc-CceEEEec
Q 024788 160 VIVS-DALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 160 VivS-DaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (262)
||.+ +++.|++|..+.+.|-++.|+-. +|.++++-
T Consensus 154 v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 154 VVISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp EEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 9965 88999999889999999999865 55655543
No 49
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=96.17 E-value=0.0082 Score=50.60 Aligned_cols=147 Identities=19% Similarity=0.158 Sum_probs=89.0
Q ss_pred hHHHHHhc-cccceeeeecCCcchhhhhccccc-ccccccccc-ccccchhHHHHhhhhhcc--eeeeeecCCCCCCCCC
Q 024788 82 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEP-YDIEDADARCKSLVHKGI--VRVADIKFPLPYRAKS 156 (262)
Q Consensus 82 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEP-ydied~d~~CKsLvrKGi--VRvADIkfpLPYR~kS 156 (262)
+.+-+.|. ..-.+||.||-.+......|++.- +.+..|++. --++.+..+++..--.+- +...|+--++|. .
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~ 248 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPV---T 248 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC---C
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC---C
Confidence 44445553 235689999999998888888764 456777763 223333333332110112 344666446764 4
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEecC----Ccchh---hhHHhhh---hcCCccccccchhHHHHH
Q 024788 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAGY----PGQQR---AKVAELS---KFGRPAKMRSSSWWIRYF 225 (262)
Q Consensus 157 FslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G~----Pgqqr---akvaels---kfgrpaK~rsssWW~r~F 225 (262)
|++|+.++.|.+++.....+.|-++.|+- .+|.+++.-. |.... ...-++. .+| .+.++..-|.+.+
T Consensus 249 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll 326 (374)
T 1qzz_A 249 ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMG--GRVRTRDEVVDLA 326 (374)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHS--CCCCCHHHHHHHH
T ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCC--CcCCCHHHHHHHH
Confidence 99999999999998877667788888864 5676665433 43211 1111111 122 3567888888888
Q ss_pred HHhccccc
Q 024788 226 VQTSLEEN 233 (262)
Q Consensus 226 ~qt~LeEn 233 (262)
.++|++.-
T Consensus 327 ~~aGf~~~ 334 (374)
T 1qzz_A 327 GSAGLALA 334 (374)
T ss_dssp HTTTEEEE
T ss_pred HHCCCceE
Confidence 88888643
No 50
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=96.16 E-value=0.012 Score=45.39 Aligned_cols=107 Identities=16% Similarity=0.218 Sum_probs=74.0
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccC
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 170 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLs 170 (262)
.-.+||.||..+..+...|- .+..||++.+- .--+..+|+.- +|+...+|++|+.+++|.+
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~------------~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~-- 127 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR----NPVHCFDLASL------------DPRVTVCDMAQ-VPLEDESVDVAVFCLSLMG-- 127 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC----SCEEEEESSCS------------STTEEESCTTS-CSCCTTCEEEEEEESCCCS--
T ss_pred CCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC------------CceEEEecccc-CCCCCCCEeEEEEehhccc--
Confidence 34589999999988766652 56777776654 12345667643 6777889999999999964
Q ss_pred hhhhccccccchhhc-cCceEEEecCCcchhhhHHhhhhcCCccccccchhHHHHHHHhccccc
Q 024788 171 PKYLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEEN 233 (262)
Q Consensus 171 pryLNkTLPeLaRvs-adglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeEn 233 (262)
..+.+.|-++.|+- .+|.++++-.... ..+...|.+.+.++|++.-
T Consensus 128 -~~~~~~l~~~~~~L~~gG~l~i~~~~~~----------------~~~~~~~~~~l~~~Gf~~~ 174 (215)
T 2zfu_A 128 -TNIRDFLEEANRVLKPGGLLKVAEVSSR----------------FEDVRTFLRAVTKLGFKIV 174 (215)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEECGGG----------------CSCHHHHHHHHHHTTEEEE
T ss_pred -cCHHHHHHHHHHhCCCCeEEEEEEcCCC----------------CCCHHHHHHHHHHCCCEEE
Confidence 34566777888864 5677777654321 1266778888888887653
No 51
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.13 E-value=0.0063 Score=46.80 Aligned_cols=112 Identities=19% Similarity=0.251 Sum_probs=74.2
Q ss_pred hhhhHHHHHhc-cccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCC
Q 024788 79 RAIPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAK 155 (262)
Q Consensus 79 ~aiP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~k 155 (262)
+...++..... ..-.+||-+|..+......|.+.. .+..|||+.+ ++-+..+++..- +--+..+|+.-.. -..
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~--~~~ 113 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKRWS-HISWAATDILQFS--TAE 113 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTTCS-SEEEEECCTTTCC--CSC
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcccCC-CeEEEEcchhhCC--CCC
Confidence 33344444433 234689999999998887777664 6888888753 333333333211 1134566765433 368
Q ss_pred CccEEEecccccccC-hhhhccccccchhhccC-ceEEEec
Q 024788 156 SFPLVIVSDALDYLS-PKYLNKTLPDLARVASD-GVLIFAG 194 (262)
Q Consensus 156 SFslVivSDaLDyLs-pryLNkTLPeLaRvsad-glViF~G 194 (262)
+|++|+.++.|.|+. |..+.+.|.++.|+-.. |+++|+-
T Consensus 114 ~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 114 LFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 999999999999998 67888889999997655 5555543
No 52
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.12 E-value=0.01 Score=46.59 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=65.3
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
-.+||-||-.+-.....|.+.-..+.-|||+.+ ++.+..+.+..- .+=-+..+|+. .+|+ ..+|++|+..+++.
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~V~~~~~~~ 114 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYVA-NEKCDVAACVGATW 114 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCCC-SSCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCCc-CCCCCEEEECCChH
Confidence 358999999998877777765556778887653 333444433211 11224567774 3566 88999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 024788 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (262)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (262)
++.. ..+.|-++.|+-. +|.++++
T Consensus 115 ~~~~--~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 115 IAGG--FAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp GTSS--SHHHHHHHTTSEEEEEEEEEE
T ss_pred hcCC--HHHHHHHHHHHcCCCeEEEEe
Confidence 8852 4566778888755 5666664
No 53
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.10 E-value=0.0072 Score=46.31 Aligned_cols=115 Identities=26% Similarity=0.276 Sum_probs=76.0
Q ss_pred HHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCC
Q 024788 77 IQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA 154 (262)
Q Consensus 77 V~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~ 154 (262)
.+..++.+.+.... -.+||.+|..+-.....|.+.. .+..|||+.+ ++.+..+++..-.+--+..+|+. .+|+..
T Consensus 25 ~~~~~~~l~~~~~~-~~~vLDlG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~ 101 (227)
T 1ve3_A 25 IETLEPLLMKYMKK-RGKVLDLACGVGGFSFLLEDYG-FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KLSFED 101 (227)
T ss_dssp HHHHHHHHHHSCCS-CCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SCCSCT
T ss_pred HHHHHHHHHHhcCC-CCeEEEEeccCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchh-cCCCCC
Confidence 34445556555544 4689999999987776665554 4888887653 33344444332222234566764 356667
Q ss_pred CCccEEEecccccccChhhhccccccchhhcc-CceEEEec
Q 024788 155 KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 155 kSFslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (262)
.+|++||..+.+.+..+.-+.+.|.++.|+-. +|.+++.-
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 89999999999888887777788888888755 56666653
No 54
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=96.10 E-value=0.0051 Score=51.05 Aligned_cols=135 Identities=13% Similarity=0.125 Sum_probs=87.7
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh--hcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvr--KGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
-.+||-+|..+-.....|.+.-..+..|||+.+ ++.+..+++..-- +--+..+|+. .+|+...+|++|+..+++.
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V~~~~~l~ 196 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTPFDKGAVTASWNNESTM 196 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCCTTCEEEEEEESCGG
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCCCCCCCEeEEEECCchh
Confidence 358999999998877777765356788988643 4445555543321 1234567774 5778789999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEecC-Cc----chhhhHHhhhhcCCccccccchhHHHHHHHhccc
Q 024788 168 YLSPKYLNKTLPDLARVA-SDGVLIFAGY-PG----QQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLE 231 (262)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G~-Pg----qqrakvaelskfgrpaK~rsssWW~r~F~qt~Le 231 (262)
|+. +.+.|.++.|+- .+|.++++.. +. ........+...-.+ .+.+..-|.+.+.++|++
T Consensus 197 ~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~l~~aGf~ 262 (312)
T 3vc1_A 197 YVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFEC-NIHSRREYLRAMADNRLV 262 (312)
T ss_dssp GSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTC-CCCBHHHHHHHHHTTTEE
T ss_pred hCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcC-CCCCHHHHHHHHHHCCCE
Confidence 995 778888888865 4566666552 11 111222222221111 256677788888888876
No 55
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=96.09 E-value=0.027 Score=46.83 Aligned_cols=149 Identities=12% Similarity=0.136 Sum_probs=91.4
Q ss_pred hhHHHHHhc-cccceeeeecCCcchhhhhccccc-ccccccccc-ccccchhHHHHhhhhhcce--eeeeecCCCCCCCC
Q 024788 81 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEP-YDIEDADARCKSLVHKGIV--RVADIKFPLPYRAK 155 (262)
Q Consensus 81 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEP-ydied~d~~CKsLvrKGiV--RvADIkfpLPYR~k 155 (262)
++.+-+.|+ .. .+||.||..+......|++.- ..+..|++. --++.+..+++..--..-| ...|+--|+| +
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~ 232 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVP---S 232 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC---S
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC---C
Confidence 344555553 23 799999999999888887653 456677765 1123343333322111223 3456644555 6
Q ss_pred CccEEEecccccccChhhhccccccchhh-ccCceEEEec--CCc--ch-hhhHHhhhhcC-CccccccchhHHHHHHHh
Q 024788 156 SFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPG--QQ-RAKVAELSKFG-RPAKMRSSSWWIRYFVQT 228 (262)
Q Consensus 156 SFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G--~Pg--qq-rakvaelskfg-rpaK~rsssWW~r~F~qt 228 (262)
+|++|+.++.|.+.++....+.|-++.|+ ..+|.+++.- .|. +. ....-++.-.. -..+.|+..-|.+.+.++
T Consensus 233 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 312 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRG 312 (334)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHT
T ss_pred CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHC
Confidence 89999999999999988877888888876 4577777663 222 11 11112221110 014567888888888888
Q ss_pred ccccc
Q 024788 229 SLEEN 233 (262)
Q Consensus 229 ~LeEn 233 (262)
|++.-
T Consensus 313 Gf~~~ 317 (334)
T 2ip2_A 313 GFAVE 317 (334)
T ss_dssp TEEEE
T ss_pred CCcee
Confidence 88753
No 56
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=96.08 E-value=0.0077 Score=48.26 Aligned_cols=99 Identities=14% Similarity=0.172 Sum_probs=70.6
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
-.+||-||..+......|.+....+..|||+.+ ++-+..+++..- .+=-+..+|+ ..+|+...+|++|+...++.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSCGG
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCCce
Confidence 358999999999998888888677899998754 333444443321 1123456787 46777789999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEec
Q 024788 168 YLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G 194 (262)
++.| .+.|-++.|+- .+|.++++.
T Consensus 126 ~~~~---~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 126 NIGF---ERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp GTCH---HHHHHHHGGGEEEEEEEEEEE
T ss_pred ecCH---HHHHHHHHHHcCCCCEEEEEE
Confidence 9954 55677777754 456776654
No 57
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.96 E-value=0.018 Score=48.41 Aligned_cols=147 Identities=18% Similarity=0.168 Sum_probs=92.6
Q ss_pred hHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccc-cccccchhHHHHhhhh--hcceeeeeecCCCCCCCCC
Q 024788 82 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVE-PYDIEDADARCKSLVH--KGIVRVADIKFPLPYRAKS 156 (262)
Q Consensus 82 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVE-Pydied~d~~CKsLvr--KGiVRvADIkfpLPYR~kS 156 (262)
+.+-+.|. ..-.+||.||-.+-.....|++.. +.+..|++ |--++.+..+++..-- +=-+...|+.-++|- .
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~ 249 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR---K 249 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS---C
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC---C
Confidence 44445554 334689999999998888887764 45677777 4444445544433211 112345676546663 4
Q ss_pred ccEEEecccccccChhhhccccccchhh-ccCceEEEecC---Ccch---hhhHHhh---hhcCCccccccchhHHHHHH
Q 024788 157 FPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGY---PGQQ---RAKVAEL---SKFGRPAKMRSSSWWIRYFV 226 (262)
Q Consensus 157 FslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G~---Pgqq---rakvael---skfgrpaK~rsssWW~r~F~ 226 (262)
|++|+.++.|.++++....+.|-++.|+ ..+|.+++.-. |... -+...++ ..+| .+.++...|.+.+.
T Consensus 250 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~e~~~ll~ 327 (360)
T 1tw3_A 250 ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLG--GALRTREKWDGLAA 327 (360)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHS--CCCCBHHHHHHHHH
T ss_pred ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcC--CcCCCHHHHHHHHH
Confidence 9999999999999887777788888886 45676666542 3221 1111222 1223 35678888888888
Q ss_pred Hhccccc
Q 024788 227 QTSLEEN 233 (262)
Q Consensus 227 qt~LeEn 233 (262)
++|++.-
T Consensus 328 ~aGf~~~ 334 (360)
T 1tw3_A 328 SAGLVVE 334 (360)
T ss_dssp HTTEEEE
T ss_pred HCCCeEE
Confidence 8887643
No 58
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.94 E-value=0.011 Score=43.75 Aligned_cols=94 Identities=12% Similarity=0.125 Sum_probs=66.8
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccCh
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLsp 171 (262)
-.+||.+|..+......|.+... +..|||+.+ +.-..++....+=-+..+| +|+...+|++|+.++.+.++.
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~--~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~- 89 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINV--IALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMD- 89 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE-EEEEECSCH--HHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCS-
T ss_pred CCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCH--HHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhccc-
Confidence 35899999999988888887765 888988753 2333333332222344455 777788999999999999994
Q ss_pred hhhccccccchhhc-cCceEEEec
Q 024788 172 KYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 172 ryLNkTLPeLaRvs-adglViF~G 194 (262)
-..+.|-++.|+- .+|.++++.
T Consensus 90 -~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 90 -DKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHhcCCCCEEEEEE
Confidence 3457777888765 467777775
No 59
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.90 E-value=0.0043 Score=46.82 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=69.5
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.-.+||.+|..+..+...|++....+..|+|+.+ ++-+..+++.. ..--+..+|+.- +|+...+|++||....+++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRK-LDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTS-CCSCSSCEEEEEEESHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-CCcEEEEcchhc-CCCCCCcccEEEECcchhh
Confidence 3468999999998888888777555788887542 33333333321 123456677643 4777889999999999998
Q ss_pred cC-------------hhhhccccccchhhcc-CceEEEec
Q 024788 169 LS-------------PKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 169 Ls-------------pryLNkTLPeLaRvsa-dglViF~G 194 (262)
+. ...+.+.|-++.|+-. +|.+|+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 86 4455677777777654 56666655
No 60
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=95.90 E-value=0.015 Score=47.48 Aligned_cols=136 Identities=13% Similarity=0.139 Sum_probs=86.5
Q ss_pred cceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHh-------------h-hhhc---------------
Q 024788 92 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKS-------------L-VHKG--------------- 139 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKs-------------L-vrKG--------------- 139 (262)
-.+||-||-.|-. .+.|+.. ...+..||++.+ ++-+..+++. + ...|
T Consensus 72 ~~~vLDiGcG~G~-~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 72 GRTLIDIGSGPTV-YQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CSEEEEETCTTCC-GGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCeEEEECCCcCh-HHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 3589999998877 5555543 355788888753 2222222221 0 0122
Q ss_pred --ceeeeeecCCCCC-----CCCCccEEEecccccccChh--hhccccccchhhc-cCceEEEecCCcchhhhHHhhhhc
Q 024788 140 --IVRVADIKFPLPY-----RAKSFPLVIVSDALDYLSPK--YLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKF 209 (262)
Q Consensus 140 --iVRvADIkfpLPY-----R~kSFslVivSDaLDyLspr--yLNkTLPeLaRvs-adglViF~G~Pgqqrakvaelskf 209 (262)
-+..+|+.-++|+ ...+|++|+.+.+|.++.+. .+.+.|.++.|+= .+|.++|++.-...- ...
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~------~~~ 224 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESW------YLA 224 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCE------EEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcce------EEc
Confidence 1344588766664 34679999999999998876 6888999999975 567888876221110 011
Q ss_pred CC---ccccccchhHHHHHHHhccccch
Q 024788 210 GR---PAKMRSSSWWIRYFVQTSLEENE 234 (262)
Q Consensus 210 gr---paK~rsssWW~r~F~qt~LeEnE 234 (262)
|. +....+...|.+.|.++|++.-+
T Consensus 225 ~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 225 GEARLTVVPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp TTEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred CCeeeeeccCCHHHHHHHHHHcCCeEEE
Confidence 11 23455778899999999886543
No 61
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=95.90 E-value=0.0078 Score=48.38 Aligned_cols=107 Identities=21% Similarity=0.195 Sum_probs=73.3
Q ss_pred hhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEE
Q 024788 81 IPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLV 160 (262)
Q Consensus 81 iP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslV 160 (262)
..+|++.-. .-.+||-||..+......|.+. ..+..|||+.+ +.-..|+.... +.+..+|+. .+|+...+|++|
T Consensus 45 ~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~l~~a~~~~~-~~~~~~d~~-~~~~~~~~fD~v 118 (260)
T 2avn_A 45 GSFLEEYLK-NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSK--EMLEVAREKGV-KNVVEAKAE-DLPFPSGAFEAV 118 (260)
T ss_dssp HHHHHHHCC-SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCH--HHHHHHHHHTC-SCEEECCTT-SCCSCTTCEEEE
T ss_pred HHHHHHhcC-CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCH--HHHHHHHhhcC-CCEEECcHH-HCCCCCCCEEEE
Confidence 344444333 4468999999998888777765 56788988753 12222232222 347778875 467778899999
Q ss_pred EecccccccChhhhccccccchhhcc-CceEEEec
Q 024788 161 IVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 161 ivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (262)
+.++.+.++.+. +.+.|-++.|+-. +|.++++-
T Consensus 119 ~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 119 LALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp EECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEe
Confidence 999888777665 7788889988765 56766654
No 62
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=95.86 E-value=0.0092 Score=45.72 Aligned_cols=96 Identities=23% Similarity=0.296 Sum_probs=65.4
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccC
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 170 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLs 170 (262)
.-.+||.+|..+......| ...+..|||+.+ +.-..++.....--+..+|+. .+|+...+|++|+..+.|+|+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSE--AMLAVGRRRAPEATWVRAWGE-ALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCH--HHHHHHHHHCTTSEEECCCTT-SCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCH--HHHHHHHHhCCCcEEEEcccc-cCCCCCCcEEEEEEcChhhhcC
Confidence 4568999999998877666 223778887653 122222222222334566764 4778888999999999999996
Q ss_pred hhhhccccccchhhcc-CceEEEec
Q 024788 171 PKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 171 pryLNkTLPeLaRvsa-dglViF~G 194 (262)
...+.|-++.|+-. +|.++++.
T Consensus 110 --~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 --DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEe
Confidence 34577888888754 67777765
No 63
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.80 E-value=0.015 Score=48.36 Aligned_cols=135 Identities=12% Similarity=0.104 Sum_probs=70.9
Q ss_pred ceeeeecCCcchhhhhcccccccccccccc-c--cccchhHHH-----Hhhhh----hcceeeeeecC-----CCC-C-C
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEP-Y--DIEDADARC-----KSLVH----KGIVRVADIKF-----PLP-Y-R 153 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEP-y--died~d~~C-----KsLvr----KGiVRvADIkf-----pLP-Y-R 153 (262)
.+||.+|-.|..+--.|.+....+.+||+. . -++.+..|+ +..-- .+-|++..... .++ + .
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 489999999877665666655457888886 3 244455555 21100 01244321111 011 0 3
Q ss_pred CCCccEEEecccccccChhhhccccccchhhcc------CceEEEecCCcc------hhhhHHhhhhcC--Cccccccch
Q 024788 154 AKSFPLVIVSDALDYLSPKYLNKTLPDLARVAS------DGVLIFAGYPGQ------QRAKVAELSKFG--RPAKMRSSS 219 (262)
Q Consensus 154 ~kSFslVivSDaLDyLspryLNkTLPeLaRvsa------dglViF~G~Pgq------qrakvaelskfg--rpaK~rsss 219 (262)
..+|++||.+|.+-+ +..+.+.|.++.|+-. +|.++++-.|.. ...-...+.+.| +..+.....
T Consensus 161 ~~~fD~Ii~~dvl~~--~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~~~~ 238 (281)
T 3bzb_A 161 LQRFQVVLLADLLSF--HQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPWLSPL 238 (281)
T ss_dssp CSSBSEEEEESCCSC--GGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEEECCC
T ss_pred CCCCCEEEEeCcccC--hHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEecccc
Confidence 578999999999876 4556677778888655 886554433322 223334556777 555554444
Q ss_pred hHHHHHHHhc
Q 024788 220 WWIRYFVQTS 229 (262)
Q Consensus 220 WW~r~F~qt~ 229 (262)
-|...|.++.
T Consensus 239 ~~~~~f~~~~ 248 (281)
T 3bzb_A 239 QMDPMFPDDP 248 (281)
T ss_dssp ----------
T ss_pred ccccccccCC
Confidence 5667776653
No 64
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.70 E-value=0.038 Score=47.48 Aligned_cols=147 Identities=20% Similarity=0.205 Sum_probs=95.5
Q ss_pred hHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh-hc-----ceeeeeecC---CCC
Q 024788 82 PILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKF---PLP 151 (262)
Q Consensus 82 P~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr-KG-----iVRvADIkf---pLP 151 (262)
++|...+...-.+||-||-.|-.....|++.- ..+..|++. +++-..++.... .| -+...|+-- |+|
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p 246 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL---PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP 246 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC---HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC
T ss_pred HHHHHhcccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC---HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC
Confidence 55666666678899999999988888888753 445666653 343334443322 22 234567654 355
Q ss_pred CCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEec--CCcchhhhH----Hhhh-----hcCCccccccch
Q 024788 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPGQQRAKV----AELS-----KFGRPAKMRSSS 219 (262)
Q Consensus 152 YR~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G--~Pgqqrakv----aels-----kfgrpaK~rsss 219 (262)
.+|++|+.+.+|.++++...-+.|-++.|+ ..+|.+++.- .|.+..... .... -.....+.|+..
T Consensus 247 ---~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 323 (363)
T 3dp7_A 247 ---TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSD 323 (363)
T ss_dssp ---CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHH
T ss_pred ---CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHH
Confidence 799999999999999988877888888885 5678777644 233221110 0010 112335677888
Q ss_pred hHHHHHHHhccccch
Q 024788 220 WWIRYFVQTSLEENE 234 (262)
Q Consensus 220 WW~r~F~qt~LeEnE 234 (262)
=|.+.|.++|++.-+
T Consensus 324 e~~~ll~~AGf~~v~ 338 (363)
T 3dp7_A 324 DLIRCIENAGLEVEE 338 (363)
T ss_dssp HHHHHHHTTTEEESC
T ss_pred HHHHHHHHcCCeEEE
Confidence 899999998887543
No 65
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=95.61 E-value=0.013 Score=47.96 Aligned_cols=106 Identities=8% Similarity=0.134 Sum_probs=75.4
Q ss_pred HHHHHhccccceeeeecCCcchhhhhccc--ccccccccccccc--ccchhHHHHhh---hhhcceeeeeecCCCCCCC-
Q 024788 83 ILKKAYGDSMHKVLHVGPDTCSVVSTLLK--EEETEAWGVEPYD--IEDADARCKSL---VHKGIVRVADIKFPLPYRA- 154 (262)
Q Consensus 83 ~LkkaYGdsM~kVLHVGPdtC~VVs~LLk--Ee~tEAWGVEPyd--ied~d~~CKsL---vrKGiVRvADIkfpLPYR~- 154 (262)
.|.+.....-.+||-||-.+-.....|.+ ....+..||++.+ ++-+..+++.. ..+=-+.++|+. -+|+..
T Consensus 28 ~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~ 106 (299)
T 3g5t_A 28 MIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGA 106 (299)
T ss_dssp HHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCT
T ss_pred HHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCcccc
Confidence 34443345667999999999988888886 5678899998764 44455555443 222235567774 345555
Q ss_pred -----CCccEEEecccccccChhhhccccccchhhcc-CceEEE
Q 024788 155 -----KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIF 192 (262)
Q Consensus 155 -----kSFslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF 192 (262)
.+|++|+.+.++.|+ .+.+.|.++.|+-. +|.+++
T Consensus 107 ~~~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 107 DSVDKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTTSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEE
Confidence 799999999999999 56688888888654 567766
No 66
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=95.54 E-value=0.014 Score=50.16 Aligned_cols=102 Identities=13% Similarity=0.151 Sum_probs=71.8
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCC-CCCCccEEEeccccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY-RAKSFPLVIVSDALDYL 169 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPY-R~kSFslVivSDaLDyL 169 (262)
.+||-||..|-.....|.+. ..+..|||+.+ ++-+..+++... --+++.|+.++++- -..+|++|+.+.+|.++
T Consensus 47 ~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPKELAGHFDFVLNDRLINRF 123 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCGGGTTCCSEEEEESCGGGS
T ss_pred CEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccccccccCCCccEEEEhhhhHhC
Confidence 58999999988766666654 56888888754 333444443321 11334444442232 24689999999999999
Q ss_pred ChhhhccccccchhhccCceEEEecCCc
Q 024788 170 SPKYLNKTLPDLARVASDGVLIFAGYPG 197 (262)
Q Consensus 170 spryLNkTLPeLaRvsadglViF~G~Pg 197 (262)
.+..+.+.|.++.|+-..|.++++-.+|
T Consensus 124 ~~~~~~~~l~~l~~lLPGG~l~lS~~~g 151 (261)
T 3iv6_A 124 TTEEARRACLGMLSLVGSGTVRASVKLG 151 (261)
T ss_dssp CHHHHHHHHHHHHHHHTTSEEEEEEEBS
T ss_pred CHHHHHHHHHHHHHhCcCcEEEEEeccC
Confidence 9999999999999977999999886555
No 67
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=95.45 E-value=0.03 Score=43.87 Aligned_cols=134 Identities=13% Similarity=0.095 Sum_probs=80.8
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
.-.+||.+|-.|-.....|.+.- ..+..|||+.+- .-..++.....--+..+|+.- +| -..+|++|+.++++.|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~--~~~~a~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDD--MLEKAADRLPNTNFGKADLAT-WK-PAQKADLLYANAVFQWV 108 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHH--HHHHHHHHSTTSEEEECCTTT-CC-CSSCEEEEEEESCGGGS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHH--HHHHHHHhCCCcEEEECChhh-cC-ccCCcCEEEEeCchhhC
Confidence 34689999999888777666552 567888876531 112222222223456777753 45 57899999999999999
Q ss_pred Chhhhccccccchhhcc-CceEEEecCCcch----hhhHHhhhhc-------C----CccccccchhHHHHHHHhccc
Q 024788 170 SPKYLNKTLPDLARVAS-DGVLIFAGYPGQQ----RAKVAELSKF-------G----RPAKMRSSSWWIRYFVQTSLE 231 (262)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G~Pgqq----rakvaelskf-------g----rpaK~rsssWW~r~F~qt~Le 231 (262)
. -..+.|.++.|+-. +|.++++- |+.. .....++... . .+....+...|.+.+.++|++
T Consensus 109 ~--~~~~~l~~~~~~L~pgG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 183 (259)
T 2p35_A 109 P--DHLAVLSQLMDQLESGGVLAVQM-PDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSR 183 (259)
T ss_dssp T--THHHHHHHHGGGEEEEEEEEEEE-ECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEE
T ss_pred C--CHHHHHHHHHHhcCCCeEEEEEe-CCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCc
Confidence 4 35577888888755 56666653 3221 1112222211 1 123455667777777777764
No 68
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=95.40 E-value=0.056 Score=42.14 Aligned_cols=126 Identities=13% Similarity=0.177 Sum_probs=75.7
Q ss_pred HHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCC--CCCCCc
Q 024788 84 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLP--YRAKSF 157 (262)
Q Consensus 84 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLP--YR~kSF 157 (262)
+.+.++..-.+||-+|-.+-.....|.+.- +.+..|||+.+ ++.+..+++..- ..=-+..+|+.- +| +...+|
T Consensus 34 ~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~ 112 (214)
T 1yzh_A 34 WRDLFGNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEI 112 (214)
T ss_dssp HHHHHTSCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCC
T ss_pred HHHHcCCCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCC
Confidence 446678777899999999998887777664 56888998653 344544544321 111134567653 55 667889
Q ss_pred cEEEecccccccChhhh------ccccccchh-hccCceEEEec-CCcchhhhHHhhhhcC
Q 024788 158 PLVIVSDALDYLSPKYL------NKTLPDLAR-VASDGVLIFAG-YPGQQRAKVAELSKFG 210 (262)
Q Consensus 158 slVivSDaLDyLspryL------NkTLPeLaR-vsadglViF~G-~Pgqqrakvaelskfg 210 (262)
++|++.-...+...++- ...|.++.| +..+|+++|.. .+.+...-.+.+.+.|
T Consensus 113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g 173 (214)
T 1yzh_A 113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYG 173 (214)
T ss_dssp SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCC
Confidence 99987633223222221 234556666 46678888865 4344433344555555
No 69
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=95.33 E-value=0.018 Score=43.58 Aligned_cols=135 Identities=17% Similarity=0.185 Sum_probs=80.7
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCC--CCCCCCC-ccEEEeccccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFP--LPYRAKS-FPLVIVSDALDYL 169 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfp--LPYR~kS-FslVivSDaLDyL 169 (262)
.+||.+|..+......|.+. ..+..|||+.+ ..-..++.. ...-+...|+.-. .|..... |++|+.+++|.
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR-GIEAVGVDGDR--TLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT-TCEEEEEESCH--HHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCH--HHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 78999999999888777776 56788887753 122223322 1222334443221 2444454 99999999998
Q ss_pred Chhhhccccccchhhcc-CceEEEec-CCcchhhh-------HHhhhhc-----CCccccccchhHHHHHHHhccccch
Q 024788 170 SPKYLNKTLPDLARVAS-DGVLIFAG-YPGQQRAK-------VAELSKF-----GRPAKMRSSSWWIRYFVQTSLEENE 234 (262)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G-~Pgqqrak-------vaelskf-----grpaK~rsssWW~r~F~qt~LeEnE 234 (262)
..-+.+.|.++.|+-. +|.++++. .|...... ..+...+ +.+...++...|.+.+.++|++..+
T Consensus 128 -~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 128 -HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp -SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred -hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 3445577888888755 56666654 33221110 0001111 1223455778899999999987543
No 70
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=95.31 E-value=0.044 Score=45.97 Aligned_cols=137 Identities=15% Similarity=0.176 Sum_probs=86.2
Q ss_pred ccceeeeecCCc---chhhhhcccc--ccccccccccccccchhHHHHhhhh-hcc--eeeeeecCC------------C
Q 024788 91 SMHKVLHVGPDT---CSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVH-KGI--VRVADIKFP------------L 150 (262)
Q Consensus 91 sM~kVLHVGPdt---C~VVs~LLkE--e~tEAWGVEPydied~d~~CKsLvr-KGi--VRvADIkfp------------L 150 (262)
...+||.||-.+ -.+ ..++.+ .+.+..||+.. .+.-...+.+.. .+- +..+|+.-+ +
T Consensus 77 ~~~~vLDlGcG~pt~G~~-~~~~~~~~p~~~v~~vD~s--p~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNT-HEVAQSVNPDARVVYVDID--PMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCH-HHHHHHHCTTCEEEEEESS--HHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChH-HHHHHHhCCCCEEEEEECC--hHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 357999998777 544 344433 24677787753 222233333332 122 345666321 3
Q ss_pred CCCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEecCCc----chhhhHHhhhhcCCccccccchhHHHHH
Q 024788 151 PYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGYPG----QQRAKVAELSKFGRPAKMRSSSWWIRYF 225 (262)
Q Consensus 151 PYR~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G~Pg----qqrakvaelskfgrpaK~rsssWW~r~F 225 (262)
|+ .+|.+|+...+|-|+++.-..+.|-+++|+ ...|.++|+-... +.++-.....+.|.|..+|+..-|.++|
T Consensus 154 d~--~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l 231 (274)
T 2qe6_A 154 DF--SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQF 231 (274)
T ss_dssp CT--TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTT
T ss_pred CC--CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHh
Confidence 33 389999999999999987778899999994 5667777765332 2211122234456688889999999999
Q ss_pred HHhccccch
Q 024788 226 VQTSLEENE 234 (262)
Q Consensus 226 ~qt~LeEnE 234 (262)
.|++.-|
T Consensus 232 --~G~~l~~ 238 (274)
T 2qe6_A 232 --GDFELVE 238 (274)
T ss_dssp --TTCEECT
T ss_pred --CCCeEcc
Confidence 5776544
No 71
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=95.20 E-value=0.1 Score=41.14 Aligned_cols=91 Identities=13% Similarity=0.065 Sum_probs=62.6
Q ss_pred cccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCC-CCCccEEEecccccc
Q 024788 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYR-AKSFPLVIVSDALDY 168 (262)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR-~kSFslVivSDaLDy 168 (262)
..-.+||-||-.|......|.+. ..+..|||+.+ +.-..++....+--+..+|+.-++|+. ..+|++|+.++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---- 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSP--ELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR---- 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCH--HHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCH--HHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC----
Confidence 34468999999998877777766 56888888754 122222222223346678887778988 88999998872
Q ss_pred cChhhhccccccchhhcc-CceEE
Q 024788 169 LSPKYLNKTLPDLARVAS-DGVLI 191 (262)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglVi 191 (262)
.+.+.|.++.|+-. +|.++
T Consensus 120 ----~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 ----GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ----CCSGGGGGHHHHEEEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCcEEE
Confidence 35567778887654 56666
No 72
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=95.18 E-value=0.024 Score=46.38 Aligned_cols=98 Identities=11% Similarity=0.118 Sum_probs=65.5
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
-.+||.||..|......|.+.- ..+..|||+.. ++-+..+++..-.+=-+.++|+. .+|+ +.+|++|+....|.
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EIEL-NDKYDIAICHAFLL 100 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCCC-SSCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hcCc-CCCeeEEEECChhh
Confidence 4689999999998888777662 46888887653 23333333321112235567876 4666 57999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 024788 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (262)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (262)
++... .+.|-++.|+-. +|.+++.
T Consensus 101 ~~~~~--~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 101 HMTTP--ETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp GCSSH--HHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCH--HHHHHHHHHHcCCCCEEEEE
Confidence 98532 467777777654 5665544
No 73
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=95.10 E-value=0.047 Score=41.48 Aligned_cols=97 Identities=14% Similarity=0.138 Sum_probs=63.9
Q ss_pred eeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccCh
Q 024788 94 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (262)
Q Consensus 94 kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLsp 171 (262)
+||.+|..+......|.+. ..+..|||+.+ ++.+..+.+..-.+--+..+|+. .+|+...+|++||.+ +-++.+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~--~~~~~~ 107 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLA-DFDIVADAWEGIVSI--FCHLPS 107 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTT-TBSCCTTTCSEEEEE--CCCCCH
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChh-hcCCCcCCccEEEEE--hhcCCH
Confidence 9999999998777666665 56888887642 22233222211001224456663 346667899999985 456677
Q ss_pred hhhccccccchhhcc-CceEEEec
Q 024788 172 KYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 172 ryLNkTLPeLaRvsa-dglViF~G 194 (262)
..+.+.|-++.|+-. +|.++++.
T Consensus 108 ~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 108 SLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 788888889888754 67777766
No 74
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=95.04 E-value=0.047 Score=44.78 Aligned_cols=137 Identities=12% Similarity=0.126 Sum_probs=87.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrK--GiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
-.+||-||-.+-.....|.+.-..+..||++.+ ++-+..+++..--. =-+..+|+. .+ ..+|++|+..+++.
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~---~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE-EF---DEPVDRIVSLGAFE 148 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG-GC---CCCCSEEEEESCGG
T ss_pred cCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH-Hc---CCCccEEEEcchHH
Confidence 358999999998888888776347788887643 33344443331111 114566773 23 78999999999999
Q ss_pred cc-------Chhhhccccccchhhc-cCceEEEecC--CcchhhhH-------------HhhhhcCCcc-ccccchhHHH
Q 024788 168 YL-------SPKYLNKTLPDLARVA-SDGVLIFAGY--PGQQRAKV-------------AELSKFGRPA-KMRSSSWWIR 223 (262)
Q Consensus 168 yL-------spryLNkTLPeLaRvs-adglViF~G~--Pgqqrakv-------------aelskfgrpa-K~rsssWW~r 223 (262)
++ .++.+.+.|.++.|+- .+|.+++... +....... .-+.++--|- .+.+...|.+
T Consensus 149 ~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~ 228 (302)
T 3hem_A 149 HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDY 228 (302)
T ss_dssp GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHH
T ss_pred hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHH
Confidence 99 6688889999999865 5677777653 22211100 1122222221 4667778888
Q ss_pred HHHHhcccc
Q 024788 224 YFVQTSLEE 232 (262)
Q Consensus 224 ~F~qt~LeE 232 (262)
.+.++|++.
T Consensus 229 ~l~~aGf~~ 237 (302)
T 3hem_A 229 YSSNAGWKV 237 (302)
T ss_dssp HHHHHTCEE
T ss_pred HHHhCCcEE
Confidence 888888753
No 75
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.02 E-value=0.031 Score=44.70 Aligned_cols=99 Identities=22% Similarity=0.258 Sum_probs=68.2
Q ss_pred cceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
-.+||.||..+......|.+.. ..+..|||+.+ ++.+..+++..- ..=-+..+|+. .+|+...+|++|+.++.|.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIF-SLPFEDSSFDHIFVCFVLE 116 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GCCSCTTCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccc-cCCCCCCCeeEEEEechhh
Confidence 4589999999999888888764 57888988753 233333332221 11113456765 5677789999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 024788 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (262)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (262)
++.. ..+.|-++.|+-. +|+++++
T Consensus 117 ~~~~--~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 117 HLQS--PEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp GCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCC--HHHHHHHHHHHcCCCcEEEEE
Confidence 9963 3477888888654 6676664
No 76
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=94.95 E-value=0.031 Score=42.84 Aligned_cols=100 Identities=17% Similarity=0.171 Sum_probs=65.4
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
-.+||-+|..+......|.+....+..|||..+ ++-+..+++..--.+ -+..+|+. ++-..+|++|+....+++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLL---ADVDGKFDLIVANILAEI 137 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT---TTCCSCEEEEEEESCHHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc---ccCCCCceEEEECCcHHH
Confidence 358999999998877777665556888888643 344555544332221 23455653 233589999998776654
Q ss_pred cChhhhccccccchhh-ccCceEEEecCCcch
Q 024788 169 LSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 199 (262)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~Pgqq 199 (262)
+.+.|.++.|+ ..+|.+++++....+
T Consensus 138 -----~~~~l~~~~~~L~~gG~l~~~~~~~~~ 164 (205)
T 3grz_A 138 -----LLDLIPQLDSHLNEDGQVIFSGIDYLQ 164 (205)
T ss_dssp -----HHHHGGGSGGGEEEEEEEEEEEEEGGG
T ss_pred -----HHHHHHHHHHhcCCCCEEEEEecCccc
Confidence 45667777775 567888887754443
No 77
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=94.92 E-value=0.029 Score=41.31 Aligned_cols=105 Identities=12% Similarity=0.066 Sum_probs=67.2
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh---cceeeeeecCCCCCCCCCccEEEeccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK---GIVRVADIKFPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrK---GiVRvADIkfpLPYR~kSFslVivSDa 165 (262)
.-.+||.+|..+......|++. ..+..|||+-+ ++.+..+++..--. --+..+|+.-+++ ..+|++|+....
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~ 128 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNPP 128 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECCC
Confidence 3458999999998888888777 77888887543 34444444332111 2344566655554 778999998655
Q ss_pred ccccChhhhccccccchhh-ccCceEEEecCCcch
Q 024788 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 199 (262)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G~Pgqq 199 (262)
+.+ ....+.+.|-++.|+ ..+|.++++....+.
T Consensus 129 ~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 129 IRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp STT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred ccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 432 345556677777775 457787777655443
No 78
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=94.82 E-value=0.03 Score=46.28 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=70.3
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--------hhcceeeeeecCCC---CCC--CCC
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--------HKGIVRVADIKFPL---PYR--AKS 156 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--------rKGiVRvADIkfpL---PYR--~kS 156 (262)
-.+||.+|-.|......|++....+..||++-+ ++.+..+++..- .+--+.++|+.-.. |+. ..+
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 114 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMC 114 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCC
T ss_pred CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCC
Confidence 458999999999998888876666788887643 223333333221 01234667775321 343 459
Q ss_pred ccEEEeccccccc--Chhhhccccccchhhc-cCceEEEec
Q 024788 157 FPLVIVSDALDYL--SPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 157 FslVivSDaLDyL--spryLNkTLPeLaRvs-adglViF~G 194 (262)
|++|+.+.+|.|+ ++..+.+.|-++.|+- .+|++|++-
T Consensus 115 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 115 FDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp EEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 9999999999998 6677888888998864 567777654
No 79
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.61 E-value=0.086 Score=44.06 Aligned_cols=147 Identities=18% Similarity=0.174 Sum_probs=90.7
Q ss_pred hhHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhh-hhhcc---ee--eeeecCCCCC
Q 024788 81 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSL-VHKGI---VR--VADIKFPLPY 152 (262)
Q Consensus 81 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsL-vrKGi---VR--vADIkfpLPY 152 (262)
+|.+-+.|. ..-.+||-||-.|-.....|++.- ..+..|+ |++++-...+.. .+.|+ |+ ..|+--|+|-
T Consensus 158 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~ 234 (332)
T 3i53_A 158 YTGIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVL---DLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA 234 (332)
T ss_dssp HTTGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEe---cCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC
Confidence 344444554 345799999999998888888653 3455555 444433333332 22232 43 4566546664
Q ss_pred CCCCccEEEecccccccChhhhccccccchhh-ccCceEEEec--CCcchhhhHHhhhhc-CCccccccchhHHHHHHHh
Q 024788 153 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPGQQRAKVAELSKF-GRPAKMRSSSWWIRYFVQT 228 (262)
Q Consensus 153 R~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G--~Pgqqrakvaelskf-grpaK~rsssWW~r~F~qt 228 (262)
+|++|+.+++|.|.+....-+.|-++.|+ ..+|.+++.- .|.......-++.-+ .-..+.|+..-|.+.|.++
T Consensus 235 ---~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 311 (332)
T 3i53_A 235 ---GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQA 311 (332)
T ss_dssp ---SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHT
T ss_pred ---CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHC
Confidence 89999999999999998888888888886 5577776654 222211111121110 0224567778888888888
Q ss_pred ccccc
Q 024788 229 SLEEN 233 (262)
Q Consensus 229 ~LeEn 233 (262)
|++.-
T Consensus 312 Gf~~~ 316 (332)
T 3i53_A 312 GLAVR 316 (332)
T ss_dssp TEEEE
T ss_pred CCEEE
Confidence 87653
No 80
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=94.58 E-value=0.062 Score=45.12 Aligned_cols=104 Identities=17% Similarity=0.166 Sum_probs=68.9
Q ss_pred hHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEE
Q 024788 82 PILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLV 160 (262)
Q Consensus 82 P~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslV 160 (262)
-.|.+.-+ .-..||-||-.|-.... .|.+...+..||+|.+- .-..++. +.+ -+.++|.. .+|+...||++|
T Consensus 31 ~~l~~~~~-~~~~vLDvGcGtG~~~~-~l~~~~~~v~gvD~s~~--ml~~a~~--~~~v~~~~~~~e-~~~~~~~sfD~v 103 (257)
T 4hg2_A 31 RWLGEVAP-ARGDALDCGCGSGQASL-GLAEFFERVHAVDPGEA--QIRQALR--HPRVTYAVAPAE-DTGLPPASVDVA 103 (257)
T ss_dssp HHHHHHSS-CSSEEEEESCTTTTTHH-HHHTTCSEEEEEESCHH--HHHTCCC--CTTEEEEECCTT-CCCCCSSCEEEE
T ss_pred HHHHHhcC-CCCCEEEEcCCCCHHHH-HHHHhCCEEEEEeCcHH--hhhhhhh--cCCceeehhhhh-hhcccCCcccEE
Confidence 34544433 33579999999876544 44555678999988641 1111111 112 23445553 467779999999
Q ss_pred EecccccccChhhhccccccchhh-ccCceEEEecC
Q 024788 161 IVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (262)
Q Consensus 161 ivSDaLDyLspryLNkTLPeLaRv-sadglViF~G~ 195 (262)
+++.++.|+.| .+.|.|++|| -.+|++++.++
T Consensus 104 ~~~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 104 IAAQAMHWFDL---DRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp EECSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEeeehhHhhH---HHHHHHHHHHcCCCCEEEEEEC
Confidence 99999999975 4789999998 45677777664
No 81
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=94.55 E-value=0.0094 Score=46.85 Aligned_cols=100 Identities=7% Similarity=-0.042 Sum_probs=67.2
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcc--eeeeeecC---CCCCCC-CCccEEEeccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGI--VRVADIKF---PLPYRA-KSFPLVIVSDA 165 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGi--VRvADIkf---pLPYR~-kSFslVivSDa 165 (262)
-.+||-+|..|......|.+... +..||++.+ ++-..++......- +..+|+.- +.++.. .+|.+|+.+.+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSK--SALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS-CEEEEESCH--HHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCH--HHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 35799999999988888877655 788887643 23333433333222 34455532 222221 24899999999
Q ss_pred ccccChhhhccccccchhhcc-CceEEEec
Q 024788 166 LDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 166 LDyLspryLNkTLPeLaRvsa-dglViF~G 194 (262)
+.++++..+.+.|-++.|+-. +|.+++.-
T Consensus 134 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 134 FHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp STTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 999999999999999999765 56655554
No 82
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=94.53 E-value=0.27 Score=42.27 Aligned_cols=149 Identities=13% Similarity=0.161 Sum_probs=92.7
Q ss_pred hhhHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhh-hhcc---ee--eeeecCCCC
Q 024788 80 AIPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---VR--VADIKFPLP 151 (262)
Q Consensus 80 aiP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLv-rKGi---VR--vADIkfpLP 151 (262)
.++.+-+.|. ..-.+||-||-.+-.....|++.- +.+..|++ ++++-...+..+ +.|+ |+ ..|+--|+|
T Consensus 190 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D---~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p 266 (369)
T 3gwz_A 190 EAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLE---RPPVAEEARELLTGRGLADRCEILPGDFFETIP 266 (369)
T ss_dssp HHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC
T ss_pred hHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEc---CHHHHHHHHHhhhhcCcCCceEEeccCCCCCCC
Confidence 3566667775 346799999999988888887753 33455554 344333343322 2332 43 456654555
Q ss_pred CCCCCccEEEecccccccChhhhccccccchhhc-cCceEEEec--CCcch--hhhHHhhhhc-CCccccccchhHHHHH
Q 024788 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ--RAKVAELSKF-GRPAKMRSSSWWIRYF 225 (262)
Q Consensus 152 YR~kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqq--rakvaelskf-grpaK~rsssWW~r~F 225 (262)
- +|++|+.+++|.|.+....-+.|-++.|+= .+|.+++.- .|.+. .+...++.-+ ....+.|+...|.+.|
T Consensus 267 ~---~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll 343 (369)
T 3gwz_A 267 D---GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALL 343 (369)
T ss_dssp S---SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHH
T ss_pred C---CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHH
Confidence 3 899999999999999877667777777764 467666643 23221 1112222111 0124568888999999
Q ss_pred HHhccccch
Q 024788 226 VQTSLEENE 234 (262)
Q Consensus 226 ~qt~LeEnE 234 (262)
.++|++.-+
T Consensus 344 ~~aGf~~~~ 352 (369)
T 3gwz_A 344 EKSGLRVER 352 (369)
T ss_dssp HTTTEEEEE
T ss_pred HHCCCeEEE
Confidence 998887543
No 83
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=94.41 E-value=0.12 Score=43.93 Aligned_cols=148 Identities=17% Similarity=0.198 Sum_probs=91.1
Q ss_pred hHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhc--ceeeeeecCCCCCCCCCc
Q 024788 82 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG--IVRVADIKFPLPYRAKSF 157 (262)
Q Consensus 82 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKG--iVRvADIkfpLPYR~kSF 157 (262)
+.+-+.|. ..-.+||-||-.|-.....|++.- +....|++.-++-. ..+.+..-..+ -+...|+--|+| +|
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~-~~~~~~~~~~~~v~~~~~d~~~~~p----~~ 248 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA-RHRLDAPDVAGRWKVVEGDFLREVP----HA 248 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT-TCCCCCGGGTTSEEEEECCTTTCCC----CC
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh-cccccccCCCCCeEEEecCCCCCCC----CC
Confidence 34445554 345689999999999888888753 34555655422211 11111000011 234567766777 89
Q ss_pred cEEEecccccccChhhhccccccchhhc-cCceEEEec--CCcch---hhhHHhhhhc-CCccccccchhHHHHHHHhcc
Q 024788 158 PLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ---RAKVAELSKF-GRPAKMRSSSWWIRYFVQTSL 230 (262)
Q Consensus 158 slVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqq---rakvaelskf-grpaK~rsssWW~r~F~qt~L 230 (262)
++|+.+++|.++++...-+.|-++.|+= .+|.+++.- .|... ....-++.-+ ....+.|+..-|.+.|.++|+
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf 328 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGL 328 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTE
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCC
Confidence 9999999999999888888899998874 467766643 22221 1112222111 123467888889999999988
Q ss_pred ccch
Q 024788 231 EENE 234 (262)
Q Consensus 231 eEnE 234 (262)
+..+
T Consensus 329 ~~~~ 332 (348)
T 3lst_A 329 RLDR 332 (348)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 7543
No 84
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=94.34 E-value=0.14 Score=42.96 Aligned_cols=140 Identities=11% Similarity=0.216 Sum_probs=90.6
Q ss_pred cceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh-hcc---ee--eeeecCCCCCCCCCccEEEecc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH-KGI---VR--VADIKFPLPYRAKSFPLVIVSD 164 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr-KGi---VR--vADIkfpLPYR~kSFslVivSD 164 (262)
-.+||.||-.+-.....|++.- ..+..|++. .+.-..++..+. .|+ |+ ..|+.-+.++-+++|++|+.++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL---PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC---HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 5799999999998888888753 456667644 333333433332 232 33 4555433322457799999999
Q ss_pred cccccChhhhccccccchhhc-cCceEEEec--CCcch----hhhHHhhhhc--CCccccccchhHHHHHHHhccccch
Q 024788 165 ALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ----RAKVAELSKF--GRPAKMRSSSWWIRYFVQTSLEENE 234 (262)
Q Consensus 165 aLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqq----rakvaelskf--grpaK~rsssWW~r~F~qt~LeEnE 234 (262)
.|.++++....+.|-++.|+= .+|.+++.- .|.+. -+...++.-+ -.-.+.|+...|.+.|.++|++.-+
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 999999988888999888864 467666643 22221 1122222221 1124578999999999999998655
No 85
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=94.22 E-value=0.006 Score=52.63 Aligned_cols=138 Identities=14% Similarity=0.183 Sum_probs=85.6
Q ss_pred HHHHhcc-ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeee-----eecCCCCCCCCCc
Q 024788 84 LKKAYGD-SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVA-----DIKFPLPYRAKSF 157 (262)
Q Consensus 84 LkkaYGd-sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvA-----DIkfpLPYR~kSF 157 (262)
+-+.++. .-.+||-||-.+-.....|.+ ...+..||||.+ +.-..++. +|+--.. |.--.+|+...+|
T Consensus 99 l~~~~~~~~~~~VLDiGcG~G~~~~~l~~-~g~~v~gvD~s~--~~~~~a~~---~~~~~~~~~~~~~~~~~l~~~~~~f 172 (416)
T 4e2x_A 99 FLATELTGPDPFIVEIGCNDGIMLRTIQE-AGVRHLGFEPSS--GVAAKARE---KGIRVRTDFFEKATADDVRRTEGPA 172 (416)
T ss_dssp HHHTTTCSSSCEEEEETCTTTTTHHHHHH-TTCEEEEECCCH--HHHHHHHT---TTCCEECSCCSHHHHHHHHHHHCCE
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHH-cCCcEEEECCCH--HHHHHHHH---cCCCcceeeechhhHhhcccCCCCE
Confidence 3344442 335899999999887766665 456889998853 12222322 2322111 1112346667899
Q ss_pred cEEEecccccccChhhhccccccchhhcc-CceEEEecCCcchhhhHHhhhhc----CCccccccchhHHHHHHHhcccc
Q 024788 158 PLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKF----GRPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 158 slVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~Pgqqrakvaelskf----grpaK~rsssWW~r~F~qt~LeE 232 (262)
++|+..++|.|+. .+++.|-++.|+-. +|++++. .|.... ..+...| .......+..+|.+.|.++|++.
T Consensus 173 D~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~-~~~~~~--~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~ 247 (416)
T 4e2x_A 173 NVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFE-DPYLGD--IVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFEL 247 (416)
T ss_dssp EEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEE-EECHHH--HHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEE
T ss_pred EEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEE-eCChHH--hhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEE
Confidence 9999999999995 67888999999865 5566654 443221 1111112 23444566778888998888754
No 86
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=94.20 E-value=0.071 Score=45.21 Aligned_cols=134 Identities=10% Similarity=0.146 Sum_probs=85.9
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
...+||.||-.|-.....|++.- ..+..|++. +++-..++.+ .+ -+...|+--++| .|++|+.++.|.+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~p----~~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR---PQVVENLSGS--NNLTYVGGDMFTSIP----NADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCB--TTEEEEECCTTTCCC----CCSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC---HHHHhhcccC--CCcEEEeccccCCCC----CccEEEeehhhcc
Confidence 34689999999999888888653 445666654 2332333332 22 133467643666 3999999999999
Q ss_pred cChhhhccccccchhhcc----CceEEEecC--Ccch-------hhhHHhhhhcCCccccccchhHHHHHHHhccccc
Q 024788 169 LSPKYLNKTLPDLARVAS----DGVLIFAGY--PGQQ-------RAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEEN 233 (262)
Q Consensus 169 LspryLNkTLPeLaRvsa----dglViF~G~--Pgqq-------rakvaelskfgrpaK~rsssWW~r~F~qt~LeEn 233 (262)
++....-+.|-++.|+=. +|.+++.-. |.+. .....++.-+....+.|+..-|.+.|.++|++.-
T Consensus 259 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 336 (352)
T 1fp2_A 259 WTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHY 336 (352)
T ss_dssp SCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCee
Confidence 988777788888888744 687777642 2211 1112222211111566788889999999998754
No 87
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.12 E-value=0.089 Score=54.24 Aligned_cols=105 Identities=11% Similarity=0.128 Sum_probs=78.1
Q ss_pred ccceeeeecCCcchhhhhcccccc--cccccccccc--ccchhHHHHhhhh---hcc----eeeeeecCCCCCCCCCccE
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYD--IEDADARCKSLVH---KGI----VRVADIKFPLPYRAKSFPL 159 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~--tEAWGVEPyd--ied~d~~CKsLvr---KGi----VRvADIkfpLPYR~kSFsl 159 (262)
.-.+||-||-.+......|.+... .+..|||+.+ ++-|..+.+.... .|+ +..+|+. .+|++..+|++
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~-dLp~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL-EFDSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT-SCCTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH-hCCcccCCeeE
Confidence 346899999999999888887763 6899998865 3334333333211 133 4556764 47888899999
Q ss_pred EEecccccccChhhhccccccchhhccCceEEEecCCc
Q 024788 160 VIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPG 197 (262)
Q Consensus 160 VivSDaLDyLspryLNkTLPeLaRvsadglViF~G~Pg 197 (262)
|+..++|.|+.+..+-+.+.++.|+-..| +++...|.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99999999999988888899999999999 44444454
No 88
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=93.90 E-value=0.81 Score=38.72 Aligned_cols=147 Identities=14% Similarity=0.127 Sum_probs=89.6
Q ss_pred hhHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhh-hhcc---e--eeeeecCCCCC
Q 024788 81 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---V--RVADIKFPLPY 152 (262)
Q Consensus 81 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLv-rKGi---V--RvADIkfpLPY 152 (262)
++.+-+.++ ..-.+||-||-.+-.....|++.- +.+..|++. +++-..++... +.|+ | ...|+-- +|+
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 254 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL---PGAIDLVNENAAEKGVADRMRGIAVDIYK-ESY 254 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCTTTEEEEECCTTT-SCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec---HHHHHHHHHHHHhcCCCCCEEEEeCcccc-CCC
Confidence 444555554 345789999999998888887764 456777765 33333333322 2232 3 3456532 244
Q ss_pred CCCCccEEEecccccccChhhhccccccchhhc-cCceEEEec--CCcchhhhHH---h-hhhc--CCc-cccccchhHH
Q 024788 153 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQRAKVA---E-LSKF--GRP-AKMRSSSWWI 222 (262)
Q Consensus 153 R~kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqqrakva---e-lskf--grp-aK~rsssWW~ 222 (262)
. .+++|+.++.|.++++....+.|-++.|+- .+|.+++.- .|.+...... + +.-+ |+. ..+++..-|.
T Consensus 255 ~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~ 332 (359)
T 1x19_A 255 P--EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYK 332 (359)
T ss_dssp C--CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHH
T ss_pred C--CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHH
Confidence 3 349999999999999888888888888874 567776554 2221000000 1 1111 322 2347888888
Q ss_pred HHHHHhccccc
Q 024788 223 RYFVQTSLEEN 233 (262)
Q Consensus 223 r~F~qt~LeEn 233 (262)
+.+.++|++.-
T Consensus 333 ~ll~~aGf~~v 343 (359)
T 1x19_A 333 EILESLGYKDV 343 (359)
T ss_dssp HHHHHHTCEEE
T ss_pred HHHHHCCCceE
Confidence 88888888643
No 89
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=93.69 E-value=0.1 Score=40.99 Aligned_cols=98 Identities=19% Similarity=0.240 Sum_probs=65.9
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEec-ccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDY 168 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivS-DaLDy 168 (262)
-.+||.+|..|......|++. ..+..|||+.+ ++-+..+++..-.+--+..+|+.- +|.. .+|++|+.. +.+.|
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CCCC-SCEEEEEECSSGGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cccC-CCccEEEEcCCchhc
Confidence 468999999999887777765 56788888643 333444443221111244566642 3332 689999976 67788
Q ss_pred cChhhhccccccchhhc-cCceEEE
Q 024788 169 LSPKYLNKTLPDLARVA-SDGVLIF 192 (262)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF 192 (262)
+++..+.+.|.++.|+- .+|++|+
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 88888888999988865 4666665
No 90
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=93.61 E-value=0.057 Score=38.59 Aligned_cols=101 Identities=11% Similarity=0.087 Sum_probs=66.1
Q ss_pred ccceeeeecCCcchhhhhcccc--ccccccccccccccchhHHHHhhhhhcceeeeeecCC-----CC--CCCCCccEEE
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFP-----LP--YRAKSFPLVI 161 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfp-----LP--YR~kSFslVi 161 (262)
.-.+||.+|..+......|++. .+.+..|+|+-++.+. .+--+..+|+.-. +| +...+|++|+
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~ 93 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI--------VGVDFLQGDFRDELVMKALLERVGDSKVQVVM 93 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC--------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc--------CcEEEEEcccccchhhhhhhccCCCCceeEEE
Confidence 3458999999998888777776 2478899988775443 1222345566422 11 5567999999
Q ss_pred ecccccccChhh---------hccccccchhh-ccCceEEEecCCcch
Q 024788 162 VSDALDYLSPKY---------LNKTLPDLARV-ASDGVLIFAGYPGQQ 199 (262)
Q Consensus 162 vSDaLDyLspry---------LNkTLPeLaRv-sadglViF~G~Pgqq 199 (262)
....+.+..-.. +.+.|.++.|+ ..+|.++++....++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 877776654321 14566677665 557888887755544
No 91
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=93.58 E-value=0.12 Score=44.19 Aligned_cols=144 Identities=10% Similarity=0.133 Sum_probs=88.7
Q ss_pred hhHHHHHhc--cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhc-ceeeeeecCCCCCCCCC
Q 024788 81 IPILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKS 156 (262)
Q Consensus 81 iP~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKG-iVRvADIkfpLPYR~kS 156 (262)
++.+-+.|. ..-.+||.||-.+-.....|++.- +.+..|++. +++-..++.+ .+ -+...|+.-|+| .
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~~---~- 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL---PQVIENAPPL--SGIEHVGGDMFASVP---Q- 267 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCC--TTEEEEECCTTTCCC---C-
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh---HHHHHhhhhc--CCCEEEeCCcccCCC---C-
Confidence 355556664 345789999999999888887764 334444452 2322223322 22 133467644665 2
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEec--CCcch-------hhhHHhhhhc-CCccccccchhHHHHH
Q 024788 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ-------RAKVAELSKF-GRPAKMRSSSWWIRYF 225 (262)
Q Consensus 157 FslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqq-------rakvaelskf-grpaK~rsssWW~r~F 225 (262)
|++|+.++.|.+++....-+.|-++.|+= .+|.+++.- .|.+. ....-++.-+ ....+.|+..-|.+.|
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll 347 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLS 347 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHH
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHH
Confidence 99999999999999877778888888874 467777653 23221 1122222111 0013567888888888
Q ss_pred HHhccccc
Q 024788 226 VQTSLEEN 233 (262)
Q Consensus 226 ~qt~LeEn 233 (262)
.++|++.-
T Consensus 348 ~~aGf~~~ 355 (372)
T 1fp1_D 348 KLSGFSKF 355 (372)
T ss_dssp HHTTCSEE
T ss_pred HHCCCceE
Confidence 88887643
No 92
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=93.57 E-value=0.24 Score=40.88 Aligned_cols=102 Identities=14% Similarity=0.052 Sum_probs=67.2
Q ss_pred ccceeeeecCCcchhhhhcc--cccccccccccccc--ccchhHHHHhhhhhc--ceeeeeecCCCCCCCCCccEEEecc
Q 024788 91 SMHKVLHVGPDTCSVVSTLL--KEEETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSD 164 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LL--kEe~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIkfpLPYR~kSFslVivSD 164 (262)
.-.+||-||-.+-.....|. ...+.+..|||+.+ ++-+..+++..--.+ -+..+|+.- +|+. .+|++|+...
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LDTR-EGYDLLTSNG 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CCCC-SCEEEEECCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CCcc-CCeEEEEECC
Confidence 34579999999988877773 45567888887643 233333332211111 245567643 4554 8999999999
Q ss_pred ccccc-Chhhhccccccchhh-ccCceEEEec
Q 024788 165 ALDYL-SPKYLNKTLPDLARV-ASDGVLIFAG 194 (262)
Q Consensus 165 aLDyL-spryLNkTLPeLaRv-sadglViF~G 194 (262)
.+.|+ +|...-+.|-++.|+ ..+|.++++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 99998 676655677888876 4567777665
No 93
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=93.19 E-value=0.12 Score=39.55 Aligned_cols=110 Identities=13% Similarity=0.064 Sum_probs=64.3
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.-.+||.+|-.+..+...|.+....+..|||..+ ++.+..+++ .--+..+|+.- +| .+|++||....+.+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~-~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSE-IS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGG-CC---CCEEEEEECCCC--
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHH-CC---CCeeEEEECCCchh
Confidence 3458999999999887777766455688888642 333444433 33456677643 45 68999998877777
Q ss_pred cChhhhccccccchhhccCceEEEecCCcchhhhHHhhhhcC
Q 024788 169 LSPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFG 210 (262)
Q Consensus 169 LspryLNkTLPeLaRvsadglViF~G~Pgqqrakvaelskfg 210 (262)
+...-..+.+-++.|+. |+++..-.|+....-.+.+.++|
T Consensus 123 ~~~~~~~~~l~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS--MWIYSIGNAKARDFLRREFSARG 162 (200)
T ss_dssp -----CHHHHHHHHHHE--EEEEEEEEGGGHHHHHHHHHHHE
T ss_pred ccCchhHHHHHHHHHhc--CcEEEEEcCchHHHHHHHHHHCC
Confidence 76533335566777776 65555546655422222334444
No 94
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=93.05 E-value=0.12 Score=42.32 Aligned_cols=149 Identities=13% Similarity=0.135 Sum_probs=82.3
Q ss_pred hhhHHHHHhc--cccceeeeecCCcchhh----hhccccc-cc--ccccccccc--ccchhHHHHhhhhhc--ceee---
Q 024788 80 AIPILKKAYG--DSMHKVLHVGPDTCSVV----STLLKEE-ET--EAWGVEPYD--IEDADARCKSLVHKG--IVRV--- 143 (262)
Q Consensus 80 aiP~LkkaYG--dsM~kVLHVGPdtC~VV----s~LLkEe-~t--EAWGVEPyd--ied~d~~CKsLvrKG--iVRv--- 143 (262)
.+|-+-+..| ..=.+||-||-.|-.+- +.|+... .. +..||||.+ ++.+..+.+.. .| .|++
T Consensus 39 ~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~--~~~~~v~~~~~ 116 (292)
T 2aot_A 39 KLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT--SNLENVKFAWH 116 (292)
T ss_dssp THHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC--SSCTTEEEEEE
T ss_pred hchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc--cCCCcceEEEE
Confidence 4554433344 23348999999998643 3333321 22 237888764 22222222110 12 2332
Q ss_pred -eeec-CC----CCCCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEec-CCcch-hhhHHhh-hhcCC--
Q 024788 144 -ADIK-FP----LPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG-YPGQQ-RAKVAEL-SKFGR-- 211 (262)
Q Consensus 144 -ADIk-fp----LPYR~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G-~Pgqq-rakvael-skfgr-- 211 (262)
+|+. ++ .|+...+|++|+.+.+|.|+. -+.++|-++.|+ ..+|.++++- .+... ..-..+. .+++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 194 (292)
T 2aot_A 117 KETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDD 194 (292)
T ss_dssp CSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCT
T ss_pred ecchhhhhhhhccccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCC
Confidence 2332 22 135678999999999999996 357899999998 6677777653 22111 1111111 12222
Q ss_pred ccccccchhHHHHHHHhcccc
Q 024788 212 PAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 212 paK~rsssWW~r~F~qt~LeE 232 (262)
.....+..=|.+.+.++|++.
T Consensus 195 ~~~~~~~~~~~~~l~~aGf~~ 215 (292)
T 2aot_A 195 LCQYITSDDLTQMLDNLGLKY 215 (292)
T ss_dssp TCCCCCHHHHHHHHHHHTCCE
T ss_pred cccCCCHHHHHHHHHHCCCce
Confidence 223455566788888888753
No 95
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=93.00 E-value=0.17 Score=43.95 Aligned_cols=140 Identities=19% Similarity=0.135 Sum_probs=86.4
Q ss_pred ccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhh--c-------ceeeeeecCC-----CCC
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHK--G-------IVRVADIKFP-----LPY 152 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrK--G-------iVRvADIkfp-----LPY 152 (262)
.-.+||-+|..|-.....|.+. ...+..|||+.+ ++-+..+.+.+-.+ | -+..+|+.-. .|+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 3458999999998877777765 456889998754 34455554443221 3 2345676432 177
Q ss_pred CCCCccEEEecccccccChhhhccccccchhhc-cCceEEEecCCcchh--hhHHh-hhhcCC-ccccccchhHHHHHHH
Q 024788 153 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQQR--AKVAE-LSKFGR-PAKMRSSSWWIRYFVQ 227 (262)
Q Consensus 153 R~kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G~Pgqqr--akvae-lskfgr-paK~rsssWW~r~F~q 227 (262)
...+|++|+...+|.++.. ..+.|.++.|+= .+|.++++-...+++ ....+ ..-++. .....+..-|.+.+.+
T Consensus 163 ~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 7899999999999999853 467888888875 467777764222111 11111 111111 1123444668888888
Q ss_pred hcccc
Q 024788 228 TSLEE 232 (262)
Q Consensus 228 t~LeE 232 (262)
+|++.
T Consensus 241 aGF~~ 245 (383)
T 4fsd_A 241 AGFRD 245 (383)
T ss_dssp TTCCC
T ss_pred CCCce
Confidence 88864
No 96
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=92.55 E-value=0.059 Score=43.42 Aligned_cols=100 Identities=21% Similarity=0.212 Sum_probs=67.9
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh-----hhhhcceeeeeecCCCC---CCCCCccEEE
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS-----LVHKGIVRVADIKFPLP---YRAKSFPLVI 161 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKs-----LvrKGiVRvADIkfpLP---YR~kSFslVi 161 (262)
-.+||.||..|......|++. ..+..||++.+ ++-+..++.. -..+-.+..+|+. .+| +-..+|++|+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGFDAVI 135 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh-hCccccccCCCeEEEE
Confidence 358999999999888777766 44888888753 2333333211 1112223445542 344 6678999999
Q ss_pred ec-ccccccCh-----hhhccccccchhhcc-CceEEEe
Q 024788 162 VS-DALDYLSP-----KYLNKTLPDLARVAS-DGVLIFA 193 (262)
Q Consensus 162 vS-DaLDyLsp-----ryLNkTLPeLaRvsa-dglViF~ 193 (262)
.. +++.|+.. ..+.+.|-++.|+-. +|+++++
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 98 99999988 668888999999754 5666654
No 97
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=92.05 E-value=0.069 Score=44.39 Aligned_cols=105 Identities=11% Similarity=0.225 Sum_probs=70.2
Q ss_pred cceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhh------------------------------
Q 024788 92 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHK------------------------------ 138 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsLvrK------------------------------ 138 (262)
-.+||-||-.+-.+...|.+. ...+..||+..+ |+.|..+.+.....
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 358999999998887777766 356888888653 34444444332211
Q ss_pred ---------------------------cc--eeeeeecCC----CCCCCCCccEEEeccccccc----Chhhhccccccc
Q 024788 139 ---------------------------GI--VRVADIKFP----LPYRAKSFPLVIVSDALDYL----SPKYLNKTLPDL 181 (262)
Q Consensus 139 ---------------------------Gi--VRvADIkfp----LPYR~kSFslVivSDaLDyL----spryLNkTLPeL 181 (262)
.. ++.+|+.-. +|+...+|++|+...++.|+ ++..+-+.|-++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~ 206 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRI 206 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHH
Confidence 11 233454322 34677899999999999998 666777888888
Q ss_pred hhh-ccCceEEEecCC
Q 024788 182 ARV-ASDGVLIFAGYP 196 (262)
Q Consensus 182 aRv-sadglViF~G~P 196 (262)
.|+ ..+|++|+.-.|
T Consensus 207 ~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 207 YRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHEEEEEEEEEECCC
T ss_pred HHHhCCCcEEEEecCC
Confidence 886 457888887554
No 98
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=91.97 E-value=0.27 Score=37.36 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=71.7
Q ss_pred hhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh-hcceeeeeecCCCC-CCCC
Q 024788 80 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLP-YRAK 155 (262)
Q Consensus 80 aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvr-KGiVRvADIkfpLP-YR~k 155 (262)
.+..|.......=.+||-+|-.|-.+...+++....+..|||..+ ++-+..|++..-- +--+..+|+.-.++ +...
T Consensus 33 l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 112 (189)
T 3p9n_A 33 LFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTS 112 (189)
T ss_dssp HHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSS
T ss_pred HHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCC
Confidence 344555432234468999999998877767877667888988653 4445555443211 11245566543222 3367
Q ss_pred CccEEEecccccccChhhhccccccchh---hccCceEEEec
Q 024788 156 SFPLVIVSDALDYLSPKYLNKTLPDLAR---VASDGVLIFAG 194 (262)
Q Consensus 156 SFslVivSDaLDyLspryLNkTLPeLaR---vsadglViF~G 194 (262)
+|++|+...... .....+.+.+.++.| +..+|++++.-
T Consensus 113 ~fD~i~~~~p~~-~~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 113 PVDLVLADPPYN-VDSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp CCSEEEECCCTT-SCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred CccEEEECCCCC-cchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 899887754422 224677888889987 77888888854
No 99
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=91.85 E-value=0.12 Score=37.97 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=61.5
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh--hcceeeeeecCCCCCCCCCccEEEecccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvr--KGiVRvADIkfpLPYR~kSFslVivSDaL 166 (262)
.-.+||.+|..+-.....|++.. .+..|+|+.+ ++-+..+++..-- +--+..+|+.-++|.- .+|++||.+..+
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~ 110 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSG 110 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCch
Confidence 34589999999977777777665 7788887643 3444444433211 1123456665445542 489999988776
Q ss_pred cccChhhhccccccchhh-ccCceEEEecCC
Q 024788 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYP 196 (262)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~P 196 (262)
+. +.+.|-++.|+ ..+|.+++....
T Consensus 111 ~~-----~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 111 GE-----LQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp TC-----HHHHHHHHHHTEEEEEEEEEEECB
T ss_pred HH-----HHHHHHHHHHhcCCCcEEEEEecC
Confidence 43 35566666664 456777776543
No 100
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=91.83 E-value=0.16 Score=38.83 Aligned_cols=97 Identities=20% Similarity=0.167 Sum_probs=60.9
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
.-.+||-+|-.+-.....|.+. ..+.+|||+.+ ++-+..+++.+--.. -+..+|+.-.++ ...+|++|++...+.
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-ARAPFDAIIVTAAPP 154 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEESSBCS
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-cCCCccEEEEccchh
Confidence 3458999999988777666665 67888988764 333444443321111 244566644333 357899999999998
Q ss_pred ccChhhhccccccchh-hccCceEEEecCCc
Q 024788 168 YLSPKYLNKTLPDLAR-VASDGVLIFAGYPG 197 (262)
Q Consensus 168 yLspryLNkTLPeLaR-vsadglViF~G~Pg 197 (262)
++.+ ++.| +..+|.++++=.++
T Consensus 155 ~~~~--------~~~~~L~pgG~lv~~~~~~ 177 (210)
T 3lbf_A 155 EIPT--------ALMTQLDEGGILVLPVGEE 177 (210)
T ss_dssp SCCT--------HHHHTEEEEEEEEEEECSS
T ss_pred hhhH--------HHHHhcccCcEEEEEEcCC
Confidence 8764 3444 44567666654443
No 101
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=91.63 E-value=0.096 Score=41.15 Aligned_cols=127 Identities=18% Similarity=0.119 Sum_probs=78.8
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh-------------hhhhcceeeeeecCCCCCCC-CC
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS-------------LVHKGIVRVADIKFPLPYRA-KS 156 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKs-------------LvrKGiVRvADIkfpLPYR~-kS 156 (262)
.+||-+|=.|=.....|.+. ..+..||+..+ |+-+..+.+. ...+--+.++|+ +-||+.. .+
T Consensus 24 ~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~~l~~~~~~~ 101 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF-FALTARDIGH 101 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-SSSTHHHHHS
T ss_pred CEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc-ccCCcccCCC
Confidence 57999998887777666654 45788887654 3333322210 000112456777 3566654 79
Q ss_pred ccEEEecccccccChhhhccccccchhhccC-ce--EEEecCCcchhhhHHhhhhcCCccccccchhHHHHHHHhccc
Q 024788 157 FPLVIVSDALDYLSPKYLNKTLPDLARVASD-GV--LIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLE 231 (262)
Q Consensus 157 FslVivSDaLDyLspryLNkTLPeLaRvsad-gl--ViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~Le 231 (262)
|++|+...++.++.+.-..+.+-++.|+=.. |. ++...++ +. ...|.| -..+...+.+.|.+ |++
T Consensus 102 fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~-~~-------~~~~~~-~~~~~~el~~~~~~-gf~ 169 (203)
T 1pjz_A 102 CAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYD-QA-------LLEGPP-FSVPQTWLHRVMSG-NWE 169 (203)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSC-SS-------SSSSCC-CCCCHHHHHHTSCS-SEE
T ss_pred EEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecC-cc-------ccCCCC-CCCCHHHHHHHhcC-CcE
Confidence 9999999999999987777788899997665 44 3333344 21 112323 23456677777766 653
No 102
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=91.60 E-value=0.16 Score=40.27 Aligned_cols=95 Identities=14% Similarity=0.189 Sum_probs=61.8
Q ss_pred ceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhhcceeeeeecCC---CCCCCCCccEEEecccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFP---LPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfp---LPYR~kSFslVivSDaL 166 (262)
.+||-+|-.|-.....|.+. ...+..|||+.+ ++++..+++.. ..=.+..+|+.-| +|.. .+|++|+ .
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~-~--- 149 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIY-E--- 149 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEE-E---
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEE-E---
Confidence 47999999998887777766 346889998765 46666666654 2112345677644 3443 6899998 2
Q ss_pred cccChhhhccccccchh-hccCceEEEe
Q 024788 167 DYLSPKYLNKTLPDLAR-VASDGVLIFA 193 (262)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~ 193 (262)
|.-.|......|.++.| +..+|.++++
T Consensus 150 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 33344333444777775 4567888775
No 103
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=91.48 E-value=0.13 Score=41.79 Aligned_cols=87 Identities=13% Similarity=0.048 Sum_probs=57.6
Q ss_pred eeeeeecCCCCCC---CCCccEEEecccccccCh--hhhccccccchhh-ccCceEEEecCCcchhhhHHhhhhcCC--c
Q 024788 141 VRVADIKFPLPYR---AKSFPLVIVSDALDYLSP--KYLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAELSKFGR--P 212 (262)
Q Consensus 141 VRvADIkfpLPYR---~kSFslVivSDaLDyLsp--ryLNkTLPeLaRv-sadglViF~G~Pgqqrakvaelskfgr--p 212 (262)
+..+||.-+.|+- ..+|++|+.+-+|+|+.| .-+-+.|.++.|+ -..|.+||++.-++..- ..|. .
T Consensus 138 ~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~------~~g~~~~ 211 (263)
T 2a14_A 138 VLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSY------MVGKREF 211 (263)
T ss_dssp EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE------EETTEEE
T ss_pred EEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccc------eeCCeEe
Confidence 6688887765543 458999999999999864 3455688888884 56788898873322110 0121 1
Q ss_pred cc-cccchhHHHHHHHhccccc
Q 024788 213 AK-MRSSSWWIRYFVQTSLEEN 233 (262)
Q Consensus 213 aK-~rsssWW~r~F~qt~LeEn 233 (262)
.. .-+...|.+.+.++|++.-
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~i~ 233 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFDIE 233 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEE
T ss_pred eccccCHHHHHHHHHHCCCEEE
Confidence 11 1256688899999987643
No 104
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=91.38 E-value=0.59 Score=35.62 Aligned_cols=94 Identities=15% Similarity=0.128 Sum_probs=58.6
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccChh
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 172 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLspr 172 (262)
.+||-+|..|..+...|.+.. +..|||..+-- ++. ..+--+..+|+.-|+| ..+|++|+..-.+-..+++
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~-----~~~-~~~~~~~~~d~~~~~~--~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRA-----LES-HRGGNLVRADLLCSIN--QESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS--EEEEEESCHHH-----HHT-CSSSCEEECSTTTTBC--GGGCSEEEECCCCBTTCCC
T ss_pred CeEEEeccCccHHHHHHHhcC--cEEEEECCHHH-----Hhc-ccCCeEEECChhhhcc--cCCCCEEEECCCCccCCcc
Confidence 489999999998888888776 88888764311 111 2233466788866444 5899999886444333222
Q ss_pred -------hhccccccchhhccCceEEEecCC
Q 024788 173 -------YLNKTLPDLARVASDGVLIFAGYP 196 (262)
Q Consensus 173 -------yLNkTLPeLaRvsadglViF~G~P 196 (262)
-.-..+.++.|...+|.+++...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~lpgG~l~~~~~~ 125 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAVTVGMLYLLVIE 125 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHCCSSEEEEEEEG
T ss_pred ccccCCcchHHHHHHHHhhCCCCEEEEEEec
Confidence 112234444444488888886633
No 105
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=91.10 E-value=0.47 Score=37.79 Aligned_cols=93 Identities=23% Similarity=0.217 Sum_probs=59.4
Q ss_pred cccceeeeecCCcchhhhhcccc-ccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 90 DSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
..-.+||-||..+-.....|++. ...+..|||+.+ +.-..++....+--+.++|+. .+|+...+|++||..++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSK--VAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCH--HHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESCC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCH--HHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCCh--
Confidence 34468999999997666666665 256888988753 122222222222245667764 467778899999987652
Q ss_pred cChhhhccccccchhhcc-CceEEEec
Q 024788 169 LSPKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~G 194 (262)
..|.++.|+-. +|.+++..
T Consensus 159 -------~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 159 -------CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp -------CCHHHHHHHEEEEEEEEEEE
T ss_pred -------hhHHHHHHhcCCCcEEEEEE
Confidence 34677777755 56666553
No 106
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=90.93 E-value=0.25 Score=40.41 Aligned_cols=96 Identities=17% Similarity=0.096 Sum_probs=60.7
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhh--hhhcceeeeeecCCCCCCCCCccEEEecccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSL--VHKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsL--vrKGiVRvADIkfpLPYR~kSFslVivSDaL 166 (262)
.+||-+|-.+-.....|++. ...+..|||+.+ ++.+..+++.. ...=-+..+|+.-++ ...+|++||. |.-
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~--~~~~fD~Vi~-~~~ 188 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI--SDQMYDAVIA-DIP 188 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC--CSCCEEEEEE-CCS
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC--cCCCccEEEE-cCc
Confidence 58999999988877777765 356788888643 44455554432 011123456665544 4578999987 322
Q ss_pred cccChhhhccccccchh-hccCceEEEecCCc
Q 024788 167 DYLSPKYLNKTLPDLAR-VASDGVLIFAGYPG 197 (262)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~G~Pg 197 (262)
...+.|.++.| +..+|.++++..+-
T Consensus 189 ------~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 189 ------DPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp ------CGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred ------CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 22466777777 46678888877554
No 107
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=90.12 E-value=0.065 Score=44.96 Aligned_cols=116 Identities=19% Similarity=0.212 Sum_probs=64.7
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-------------
Q 024788 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG------------- 139 (262)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG------------- 139 (262)
.|.+..+|.+.- ..-.+||.+|-.+..+...|++....+..|||.-+ ++-+..+. .+ ..|
T Consensus 62 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~-~~~l~~~~~~~~~~~v 136 (281)
T 1mjf_A 62 HEPLVHPAMLAH---PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KI-DNGLLEAMLNGKHEKA 136 (281)
T ss_dssp HHHHHHHHHHHS---SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CT-TTTHHHHHHTTCCSSE
T ss_pred HHHHHHHHHhhC---CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hh-ccccccccccCCCCcE
Confidence 344444455431 23468999999999999999987556778887542 22222222 11 002
Q ss_pred ceeeeeecCCCCCCCCCccEEEecccccccCh-hhh--ccccccchhh-ccCceEEEe-cCCc
Q 024788 140 IVRVADIKFPLPYRAKSFPLVIVSDALDYLSP-KYL--NKTLPDLARV-ASDGVLIFA-GYPG 197 (262)
Q Consensus 140 iVRvADIkfpLPYR~kSFslVivSDaLDyLsp-ryL--NkTLPeLaRv-sadglViF~-G~Pg 197 (262)
-+..+|..--|+- ..+|++||+ |+.+...| ..| ...+-++.|+ ..+|++++. |.|-
T Consensus 137 ~~~~~D~~~~l~~-~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~ 197 (281)
T 1mjf_A 137 KLTIGDGFEFIKN-NRGFDVIIA-DSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVY 197 (281)
T ss_dssp EEEESCHHHHHHH-CCCEEEEEE-ECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred EEEECchHHHhcc-cCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 2345665322333 678999885 77664433 222 2334454554 668888774 5663
No 108
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=90.06 E-value=0.28 Score=38.04 Aligned_cols=95 Identities=16% Similarity=0.080 Sum_probs=59.2
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
-.+||.+|..+-.....|.+.. .+..|||+.+ ++-+..+++..- +=-+..+|+.-++| ...+|++||+...+.++
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYE-EEKPYDRVVVWATAPTL 147 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCG-GGCCEEEEEESSBBSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccccc-cCCCccEEEECCcHHHH
Confidence 3589999999977766666554 7788887652 222333332211 11244567654444 45789999999999887
Q ss_pred Chhhhccccccchhh-ccCceEEEecCCc
Q 024788 170 SPKYLNKTLPDLARV-ASDGVLIFAGYPG 197 (262)
Q Consensus 170 spryLNkTLPeLaRv-sadglViF~G~Pg 197 (262)
.. ++.|+ ..+|.++++-.+.
T Consensus 148 ~~--------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 148 LC--------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CH--------HHHHTEEEEEEEEEEECSS
T ss_pred HH--------HHHHHcCCCcEEEEEEcCC
Confidence 63 34444 4567777765443
No 109
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=90.00 E-value=0.25 Score=39.03 Aligned_cols=106 Identities=18% Similarity=0.147 Sum_probs=62.9
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCC-CCCCCCCccEEEe-cccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFP-LPYRAKSFPLVIV-SDAL 166 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfp-LPYR~kSFslViv-SDaL 166 (262)
.-.+||-||..|-.....|.+....+.+|||+.+ ++-+..+++..-.+--+..+|+.-. .|+...+|++|+. +..+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 3458999999999888877665566889998764 2223333332211112233444321 1666789999987 5544
Q ss_pred --cccChhhhccccccchhhc-cCceEEEecCC
Q 024788 167 --DYLSPKYLNKTLPDLARVA-SDGVLIFAGYP 196 (262)
Q Consensus 167 --DyLspryLNkTLPeLaRvs-adglViF~G~P 196 (262)
.......+.+.|.++.|+= .+|+++|.-..
T Consensus 140 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 1222222335578888874 57777776543
No 110
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=89.84 E-value=0.36 Score=36.19 Aligned_cols=100 Identities=15% Similarity=0.201 Sum_probs=58.5
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc--ee--eeeecCCCCCCCCCccEEEecccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI--VR--VADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi--VR--vADIkfpLPYR~kSFslVivSDaL 166 (262)
.+||-+|-.|-.....|.+. ..+.+|||..+ ++-+..+++.. |+ |+ .+|..--.++-..+|++|+.+ +
T Consensus 24 ~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~---~~~~v~~~~~~~~~l~~~~~~~fD~v~~~--~ 97 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDL---GIENTELILDGHENLDHYVREPIRAAIFN--L 97 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHH---TCCCEEEEESCGGGGGGTCCSCEEEEEEE--E
T ss_pred CEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHc---CCCcEEEEeCcHHHHHhhccCCcCEEEEe--C
Confidence 57999999998777777666 78889988654 44555555432 32 22 244432222447899999654 2
Q ss_pred cccCh---------hhhccccccchh-hccCceEEEecCCcc
Q 024788 167 DYLSP---------KYLNKTLPDLAR-VASDGVLIFAGYPGQ 198 (262)
Q Consensus 167 DyLsp---------ryLNkTLPeLaR-vsadglViF~G~Pgq 198 (262)
.|+.+ .-.-+.|.++.| +..+|.++++.++|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGH 139 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 44432 222334566656 456788888888765
No 111
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=88.98 E-value=0.6 Score=40.05 Aligned_cols=122 Identities=15% Similarity=0.159 Sum_probs=67.4
Q ss_pred CCccchHHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhh-----h-hhc
Q 024788 69 GDFSCTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSL-----V-HKG 139 (262)
Q Consensus 69 g~~sCt~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsL-----v-rKG 139 (262)
.|.....|.+-.+|.+.. ..-++||.+|-.++.+...|++.. ..+..+||.-+ ++-+..+...+ - .+=
T Consensus 64 ~de~~Y~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv 140 (294)
T 3adn_A 64 RDEFIYHEMMTHVPLLAH---GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRF 140 (294)
T ss_dssp TTHHHHHHHHHHHHHHHS---TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTC
T ss_pred CchhHHHHHHHHHHHhcC---CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCce
Confidence 344445666666666532 345799999999999999999873 45677777532 22233332222 0 123
Q ss_pred ceeeeeecCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEec
Q 024788 140 IVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFAG 194 (262)
Q Consensus 140 iVRvADIkfpLPYR~kSFslVivSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~G 194 (262)
-+.++|..-.++....+|++||+ |.-|-..|. .| ...+-++.| +..+|++++..
T Consensus 141 ~~~~~D~~~~l~~~~~~fDvIi~-D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 141 KLVIDDGVNFVNQTSQTFDVIIS-DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CEECSCSCC---CCCCCEEEEEE-CC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEChHHHHHhhcCCCccEEEE-CCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 46678876556666789998877 665543332 11 223334444 46778877743
No 112
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=88.96 E-value=0.23 Score=42.93 Aligned_cols=117 Identities=20% Similarity=0.218 Sum_probs=66.9
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc------eeeeee
Q 024788 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI------VRVADI 146 (262)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGi------VRvADI 146 (262)
|.+..+|.+.. ..-.+||.+|-.+..+...+++.. ..+..+||.-+ ++-+..+.+.+ ..|+ +..+|+
T Consensus 104 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~-~~~~~~~~v~~~~~D~ 179 (321)
T 2pt6_A 104 EMMTHVPMTVS---KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNI-SCGYEDKRVNVFIEDA 179 (321)
T ss_dssp HHHHHHHHHHS---SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT-SGGGGSTTEEEEESCH
T ss_pred HHHHHHHHhcC---CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccCCCcEEEEEccH
Confidence 45555555432 234789999999999999998873 45677776532 22233333322 1122 455665
Q ss_pred cCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEe-cCCc
Q 024788 147 KFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFA-GYPG 197 (262)
Q Consensus 147 kfpLPYR~kSFslVivSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~-G~Pg 197 (262)
.-.++....+|++||+ |..|...|. .| ...+.++.| +..+|++++. +.|-
T Consensus 180 ~~~l~~~~~~fDvIi~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 234 (321)
T 2pt6_A 180 SKFLENVTNTYDVIIV-DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 234 (321)
T ss_dssp HHHHHHCCSCEEEEEE-ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred HHHHhhcCCCceEEEE-CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 4334434678998885 665544332 12 233445554 4678888874 3453
No 113
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=88.63 E-value=0.39 Score=40.29 Aligned_cols=118 Identities=21% Similarity=0.297 Sum_probs=66.4
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhh---h--hhcceeeeeec
Q 024788 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSL---V--HKGIVRVADIK 147 (262)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsL---v--rKGiVRvADIk 147 (262)
|.+..+|.+.. ..-++||.+|-.+..+...+++. ...+..+||.-+ ++-+..+...+ . .+=-+.++|..
T Consensus 63 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~ 139 (275)
T 1iy9_A 63 EMVAHVPLFTH---PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGF 139 (275)
T ss_dssp HHHHHHHHHHS---SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSH
T ss_pred HHHHHHHHhhC---CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHH
Confidence 44455565532 24578999999999999999986 345677776432 22223332221 0 11135567754
Q ss_pred CCCCCCCCCccEEEecccccccChh-hh--ccccccch-hhccCceEEEec-CCc
Q 024788 148 FPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLA-RVASDGVLIFAG-YPG 197 (262)
Q Consensus 148 fpLPYR~kSFslVivSDaLDyLspr-yL--NkTLPeLa-RvsadglViF~G-~Pg 197 (262)
--|+-...+|++||+ |..+...|. .| ..-+.++. .+..+|++++.. .|-
T Consensus 140 ~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~ 193 (275)
T 1iy9_A 140 MHIAKSENQYDVIMV-DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPW 193 (275)
T ss_dssp HHHHTCCSCEEEEEE-SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHHhhCCCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 334444678999887 776643321 11 12233444 356788888763 443
No 114
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=88.53 E-value=0.33 Score=41.22 Aligned_cols=132 Identities=15% Similarity=0.136 Sum_probs=82.4
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcc-eeeeeecCCCCCCCCCccEEEecccccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGI-VRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKGi-VRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
...+||.||..+-.....|++.- ..+..|++. .++-...+.+ .++ +...|+--|+| +|++|+.++.|.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~~----~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ---PQVVGNLTGN--ENLNFVGGDMFKSIP----SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC---HHHHSSCCCC--SSEEEEECCTTTCCC----CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc---HHHHhhcccC--CCcEEEeCccCCCCC----CceEEEEcccccC
Confidence 44689999999999888888763 334555543 2222222221 231 23456644666 4999999999999
Q ss_pred cChhhhccccccchhhcc----CceEEEecC--Ccch-------hhhHHhhh---hcCCccccccchhHHHHHHHhcccc
Q 024788 169 LSPKYLNKTLPDLARVAS----DGVLIFAGY--PGQQ-------RAKVAELS---KFGRPAKMRSSSWWIRYFVQTSLEE 232 (262)
Q Consensus 169 LspryLNkTLPeLaRvsa----dglViF~G~--Pgqq-------rakvaels---kfgrpaK~rsssWW~r~F~qt~LeE 232 (262)
++....-+.|-++.|+-. +|.+++.-. |.+. ....-++. -+| .+.|+..-|.+.|.++|++.
T Consensus 264 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~--g~~~t~~e~~~ll~~aGf~~ 341 (358)
T 1zg3_A 264 WNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFL--GKERTKQEWEKLIYDAGFSS 341 (358)
T ss_dssp SCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHS--CCCEEHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCC--CCCCCHHHHHHHHHHcCCCe
Confidence 988766678888888744 686666431 2211 11112221 122 35688888999999988864
Q ss_pred c
Q 024788 233 N 233 (262)
Q Consensus 233 n 233 (262)
-
T Consensus 342 ~ 342 (358)
T 1zg3_A 342 Y 342 (358)
T ss_dssp E
T ss_pred e
Confidence 3
No 115
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=88.27 E-value=0.42 Score=35.79 Aligned_cols=80 Identities=20% Similarity=0.275 Sum_probs=55.9
Q ss_pred ceeeeeecCCCCC---CCCCccEEEecccccccChhhhccccccchhhc-cCceEEEecCCcchhhhHHhhhhcCCcccc
Q 024788 140 IVRVADIKFPLPY---RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKFGRPAKM 215 (262)
Q Consensus 140 iVRvADIkfpLPY---R~kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G~PgqqrakvaelskfgrpaK~ 215 (262)
-+.++|+. .+|+ ...+|++|+.+.+|.|+.+ .+.+.|.++.|+= .+|.+++. .|-.. ..+.+.-.
T Consensus 45 ~~~~~d~~-~~~~~~~~~~~fD~V~~~~~l~~~~~-~~~~~l~~~~r~LkpgG~l~~~-~~~~~--------~~~~~~~~ 113 (176)
T 2ld4_A 45 RVSVENIK-QLLQSAHKESSFDIILSGLVPGSTTL-HSAEILAEIARILRPGGCLFLK-EPVET--------AVDNNSKV 113 (176)
T ss_dssp EEEEEEGG-GGGGGCCCSSCEEEEEECCSTTCCCC-CCHHHHHHHHHHEEEEEEEEEE-EEEES--------SSCSSSSS
T ss_pred EEEEechh-cCccccCCCCCEeEEEECChhhhccc-CHHHHHHHHHHHCCCCEEEEEE-ccccc--------cccccccc
Confidence 45678886 3444 7899999999999999933 3578899999975 56777774 23111 11223344
Q ss_pred ccchhHHHHHHHhcc
Q 024788 216 RSSSWWIRYFVQTSL 230 (262)
Q Consensus 216 rsssWW~r~F~qt~L 230 (262)
++..-|.+.+.++|+
T Consensus 114 ~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 114 KTASKLCSALTLSGL 128 (176)
T ss_dssp CCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHCCC
Confidence 566789999999998
No 116
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=88.02 E-value=0.38 Score=40.79 Aligned_cols=119 Identities=19% Similarity=0.198 Sum_probs=65.7
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhh---h--hhcceeeeee
Q 024788 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSL---V--HKGIVRVADI 146 (262)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsL---v--rKGiVRvADI 146 (262)
.|.+..+|.+.. ..-.+||.+|-.+..+...|++. ...+..+||.-+ ++-+..+.+.+ . .+=-+..+|.
T Consensus 77 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~ 153 (296)
T 1inl_A 77 HEMLAHVPMFLH---PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANG 153 (296)
T ss_dssp HHHHHHHHHHHS---SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH
T ss_pred HHHHhHHHHhcC---CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH
Confidence 355555665542 23378999999999999999987 346677776532 23333333221 1 1112445675
Q ss_pred cCCCCCCCCCccEEEecccccc-cChh---hhccccccchh-hccCceEEEec-CCc
Q 024788 147 KFPLPYRAKSFPLVIVSDALDY-LSPK---YLNKTLPDLAR-VASDGVLIFAG-YPG 197 (262)
Q Consensus 147 kfpLPYR~kSFslVivSDaLDy-Lspr---yLNkTLPeLaR-vsadglViF~G-~Pg 197 (262)
.-.++....+|++||+ |+.|. ..|. |.-..+.++.| +..+|++++.. .|-
T Consensus 154 ~~~l~~~~~~fD~Ii~-d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 209 (296)
T 1inl_A 154 AEYVRKFKNEFDVIII-DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPF 209 (296)
T ss_dssp HHHGGGCSSCEEEEEE-EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHHHhhCCCCceEEEE-cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 4345555678999885 66554 3221 22233444444 46788888763 453
No 117
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=87.74 E-value=0.085 Score=39.35 Aligned_cols=104 Identities=11% Similarity=0.032 Sum_probs=65.4
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
-.+||-+|-.+......|++....+.+|||+.+ ++.+..+++..- .+--+..+|+.-.+|.-..+|++|+......
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA 111 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSH
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCC
Confidence 358999999999988888877667899998653 444555554331 1123455777555555556799888653321
Q ss_pred ccChhhhccccccch--h-hccCceEEEecCCcc
Q 024788 168 YLSPKYLNKTLPDLA--R-VASDGVLIFAGYPGQ 198 (262)
Q Consensus 168 yLspryLNkTLPeLa--R-vsadglViF~G~Pgq 198 (262)
.....+.+-.++ | +..+|++++.-.+.+
T Consensus 112 ---~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 112 ---KETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp ---HHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred ---cchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 122334455553 3 567888888765444
No 118
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=87.55 E-value=0.77 Score=40.89 Aligned_cols=122 Identities=14% Similarity=0.114 Sum_probs=75.4
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCC
Q 024788 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLP 151 (262)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLP 151 (262)
|..+.+.+|-..+.-...-.+||-+|-.+..+...|.+. ..+.+|||.-+ ++-+..|++..--..-+..+|+.-. +
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~-~ 293 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA-L 293 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT-S
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc-c
Confidence 455666665432111223458999999998887777776 56888888643 3445555543322234566777543 3
Q ss_pred CCCCCccEEEecccccc---cChhhhccccccchh-hccCceEEEecCCc
Q 024788 152 YRAKSFPLVIVSDALDY---LSPKYLNKTLPDLAR-VASDGVLIFAGYPG 197 (262)
Q Consensus 152 YR~kSFslVivSDaLDy---LspryLNkTLPeLaR-vsadglViF~G~Pg 197 (262)
....+|++||....+.+ ....-+.+.+.++.| +..+|.+++..++.
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 34679999998766655 333444455556555 46788888887664
No 119
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=87.45 E-value=0.13 Score=40.32 Aligned_cols=104 Identities=13% Similarity=0.053 Sum_probs=68.5
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
.+||-+|-.|-.+--.+++....+..|||..+ ++-+..|++..- .+--+..+|+.-.+|....+|++|+..-. |-
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p--~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP--FR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS--SS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC--CC
Confidence 58999999998877777777656788887542 444555554321 11124557765556666779998876433 22
Q ss_pred Chhhhccccccchh---hccCceEEEecCCcch
Q 024788 170 SPKYLNKTLPDLAR---VASDGVLIFAGYPGQQ 199 (262)
Q Consensus 170 spryLNkTLPeLaR---vsadglViF~G~Pgqq 199 (262)
.....+.+.++.+ +..+|++++.-.+.+.
T Consensus 134 -~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 134 -RGLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp -TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred -CCcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 3345566777776 7889999988776554
No 120
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=87.43 E-value=0.32 Score=37.30 Aligned_cols=96 Identities=18% Similarity=0.115 Sum_probs=59.5
Q ss_pred ceeeeecCCcchhhhhcccccc--cccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~--tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
.+||.+|..+-.....|.+... .+..|||+.+ ++-+..+++.+--.. -+..+|+.-++| ...+|++||+...+.
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~ 157 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTAAGP 157 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESSBBS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECCchH
Confidence 5899999998877777776553 6788888653 222333332221111 234567654444 256899999999998
Q ss_pred ccChhhhccccccchhh-ccCceEEEecCCc
Q 024788 168 YLSPKYLNKTLPDLARV-ASDGVLIFAGYPG 197 (262)
Q Consensus 168 yLspryLNkTLPeLaRv-sadglViF~G~Pg 197 (262)
++.. ++.|+ ..+|.++++=.++
T Consensus 158 ~~~~--------~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 158 KIPE--------PLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp SCCH--------HHHHTEEEEEEEEEEESSS
T ss_pred HHHH--------HHHHHcCCCcEEEEEECCC
Confidence 8763 44444 4567766654443
No 121
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=87.42 E-value=0.36 Score=39.47 Aligned_cols=97 Identities=20% Similarity=0.275 Sum_probs=61.0
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc-e--eeeeecCCCCCCCCCccEEEecccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI-V--RVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi-V--RvADIkfpLPYR~kSFslVivSDaL 166 (262)
-.+||-+|-.+-.....+.+... +..|||..+ ++.+..|++ +.|+ + ..+|+.-++| ..+|++|+..-..
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~---~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAK---RNGVRPRFLEGSLEAALP--FGPFDLLVANLYA 194 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHH---HTTCCCEEEESCHHHHGG--GCCEEEEEEECCH
T ss_pred CCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHH---HcCCcEEEEECChhhcCc--CCCCCEEEECCcH
Confidence 46899999999766555665544 888887543 444444443 2343 3 3345543343 5689999875333
Q ss_pred cccChhhhccccccchhh-ccCceEEEecCCcch
Q 024788 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 199 (262)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~Pgqq 199 (262)
+ .+...++++.|+ ..+|.++++|....+
T Consensus 195 ~-----~~~~~l~~~~~~LkpgG~lils~~~~~~ 223 (254)
T 2nxc_A 195 E-----LHAALAPRYREALVPGGRALLTGILKDR 223 (254)
T ss_dssp H-----HHHHHHHHHHHHEEEEEEEEEEEEEGGG
T ss_pred H-----HHHHHHHHHHHHcCCCCEEEEEeeccCC
Confidence 2 356778888875 567899998854433
No 122
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=87.17 E-value=0.77 Score=36.24 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=66.3
Q ss_pred cceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhhhhhc--ceeeeeecCCCCCCCCCccEEEeccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-e-~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIkfpLPYR~kSFslVivSDa 165 (262)
-.+||-+|-.+......|++. . ..+..|+|.-+ ++.+..+++..--.. -+..+|+.-+ ....+|++|+. |
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~-~- 169 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG--IEEENVDHVIL-D- 169 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC--CCCCSEEEEEE-C-
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc--cCCCCcCEEEE-C-
Confidence 357999999998888777766 3 67788887642 344555554332122 2445676644 44678999886 3
Q ss_pred ccccChhhhccccccchhh-ccCceEEEec-CCcchhhhHHhhhhcC
Q 024788 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAG-YPGQQRAKVAELSKFG 210 (262)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G-~Pgqqrakvaelskfg 210 (262)
+....+.|.++.|+ ..+|.+++.. ...|...-...+.+.|
T Consensus 170 -----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 -----LPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -----SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -----CCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 22335667777775 4567777665 3333333333444444
No 123
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=86.86 E-value=1 Score=36.64 Aligned_cols=71 Identities=17% Similarity=0.251 Sum_probs=45.7
Q ss_pred ccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEec
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVS 163 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsLvr-KGiVRvADIkfpLPYR~kSFslVivS 163 (262)
.-.+||-+|-.|..+...|.++ ...+.+|||..+ ++-+..|++.+-- +--+..+|+.-++| ..+|++||..
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~n 183 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSN 183 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEEC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEEC
Confidence 3458999999998887777755 356888888653 4445555544311 11234466655554 5689998874
No 124
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=86.81 E-value=0.39 Score=39.94 Aligned_cols=101 Identities=15% Similarity=0.045 Sum_probs=65.6
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccc--cchhHHHHh------------------hhhhcceeeeeecCCCC
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKS------------------LVHKGIVRVADIKFPLP 151 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydi--ed~d~~CKs------------------LvrKGiVRvADIkfpLP 151 (262)
=.+||-+|=.+=.....|.+. .-+..||+..+- +.+-...+. .-.+--+.++|+ +-||
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~-~~l~ 146 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI-FDLP 146 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT-TTGG
T ss_pred CCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc-ccCC
Confidence 358999998876666555554 557888887642 222222110 000112456787 4577
Q ss_pred CCC-CCccEEEecccccccChhhhccccccchhhc-cCceEEEec
Q 024788 152 YRA-KSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 152 YR~-kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (262)
... .+|++|+...+|.+|.+.-..+.+-+++|+= .+|.++++.
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 653 7999999999999998876777788888855 466665444
No 125
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=86.71 E-value=0.42 Score=41.04 Aligned_cols=126 Identities=19% Similarity=0.243 Sum_probs=67.5
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc------eeeeee
Q 024788 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI------VRVADI 146 (262)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGi------VRvADI 146 (262)
|.+..+|.+. . ..-++||.+|-.+..+...|++.. ..+.-+||.-+ ++-+..+.+.+ ..|+ +.++|.
T Consensus 83 e~l~~~~l~~--~-~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~-~~~~~~~rv~v~~~Da 158 (304)
T 2o07_A 83 EMIANLPLCS--H-PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGM-AIGYSSSKLTLHVGDG 158 (304)
T ss_dssp HHHHHHHHTT--S-SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH-HGGGGCTTEEEEESCH
T ss_pred HHHHHHHHhh--C-CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHh-hcccCCCcEEEEECcH
Confidence 5555555432 1 234789999999999999998863 45677777532 22233332221 1122 456776
Q ss_pred cCCCCCCCCCccEEEecccccccChh---hhccccccchh-hccCceEEEec-CCcchhhhHHhh
Q 024788 147 KFPLPYRAKSFPLVIVSDALDYLSPK---YLNKTLPDLAR-VASDGVLIFAG-YPGQQRAKVAEL 206 (262)
Q Consensus 147 kfpLPYR~kSFslVivSDaLDyLspr---yLNkTLPeLaR-vsadglViF~G-~Pgqqrakvael 206 (262)
.--|+....+|++||+ |+-+...|. +....+.++.| +..+|++++.. .|--+.....++
T Consensus 159 ~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~ 222 (304)
T 2o07_A 159 FEFMKQNQDAFDVIIT-DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEM 222 (304)
T ss_dssp HHHHHTCSSCEEEEEE-ECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHH
T ss_pred HHHHhhCCCCceEEEE-CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHH
Confidence 4334445688999887 776654431 11223444444 46788887754 554333333333
No 126
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=86.59 E-value=0.9 Score=34.47 Aligned_cols=107 Identities=13% Similarity=0.021 Sum_probs=63.5
Q ss_pred ceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.+||.+|..+-.....|.+. ...+..|||+.+ ++-+..+++.+--.. -+..+|+.-.. ...+|++|+. +.++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~-~~~~~ 143 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--SEPPFDGVIS-RAFAS 143 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC--CCSCEEEEEC-SCSSS
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC--ccCCcCEEEE-eccCC
Confidence 48999999998887777765 356888888653 333444444331111 13345554332 3478999984 44322
Q ss_pred cChhhhccccccchhh-ccCceEEEecCCcchhhhHHhhhh
Q 024788 169 LSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAELSK 208 (262)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~Pgqqrakvaelsk 208 (262)
+.+.+.++.|+ ..+|.+++.-.+.|. ..+.++.+
T Consensus 144 -----~~~~l~~~~~~L~~gG~l~~~~~~~~~-~~~~~~~~ 178 (207)
T 1jsx_A 144 -----LNDMVSWCHHLPGEQGRFYALKGQMPE-DEIALLPE 178 (207)
T ss_dssp -----HHHHHHHHTTSEEEEEEEEEEESSCCH-HHHHTSCT
T ss_pred -----HHHHHHHHHHhcCCCcEEEEEeCCCch-HHHHHHhc
Confidence 34555556554 557777777555543 55565544
No 127
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=86.52 E-value=0.72 Score=36.46 Aligned_cols=93 Identities=19% Similarity=0.218 Sum_probs=58.0
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCC-CccEEEecccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAK-SFPLVIVSDALDY 168 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~k-SFslVivSDaLDy 168 (262)
.+||-||-.+-.....|.+....+..|||+.+ ++.+..+++.+--.. -+..+|+..++| .. .|++||+...+.+
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD~Ii~~~~~~~ 170 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFP--PKAPYDVIIVTAGAPK 170 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG--GGCCEEEEEECSBBSS
T ss_pred CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCC--CCCCccEEEECCcHHH
Confidence 48999999987777766665447888888653 334444443321111 245567755554 34 4999999999887
Q ss_pred cChhhhccccccchh-hccCceEEEecC
Q 024788 169 LSPKYLNKTLPDLAR-VASDGVLIFAGY 195 (262)
Q Consensus 169 LspryLNkTLPeLaR-vsadglViF~G~ 195 (262)
+.. ++.| +..+|.++++-.
T Consensus 171 ~~~--------~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 171 IPE--------PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CCH--------HHHHTEEEEEEEEEEEC
T ss_pred HHH--------HHHHhcCCCcEEEEEEe
Confidence 754 3444 345676666543
No 128
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=86.16 E-value=1.7 Score=33.80 Aligned_cols=96 Identities=17% Similarity=0.150 Sum_probs=57.0
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
-.+||-+|-.+......|++. ..+..|+|+.+ ++-+..+.+..- .+--+..+|+.-++ ....+|++||. |
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~-~--- 165 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFV-D--- 165 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEE-C---
T ss_pred CCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEE-C---
Confidence 358999999988777777776 67788887643 333444433221 11123345665433 13568999986 2
Q ss_pred ccChhhhccccccchhh-ccCceEEEecCC
Q 024788 168 YLSPKYLNKTLPDLARV-ASDGVLIFAGYP 196 (262)
Q Consensus 168 yLspryLNkTLPeLaRv-sadglViF~G~P 196 (262)
+......|.++.|+ ..+|.+++.-..
T Consensus 166 ---~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 166 ---VREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp ---SSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ---CcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 22334566677764 556776666543
No 129
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=86.13 E-value=1.5 Score=33.57 Aligned_cols=100 Identities=14% Similarity=0.108 Sum_probs=62.4
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEecccc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLPYR~kSFslVivSDaL 166 (262)
.-.+||-+|..+-.+...|.+.. ..+..|||+.+ ++-+..+++..- .+=-+..+|+.-.++.- .+|++|+....+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D~i~~~~~~ 118 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPDRVFIGGSG 118 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCSEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCCEEEECCCC
Confidence 34689999999987777777664 46788887643 344444443321 11123446664444432 679999887766
Q ss_pred cccChhhhccccccchh-hccCceEEEecCC
Q 024788 167 DYLSPKYLNKTLPDLAR-VASDGVLIFAGYP 196 (262)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~G~P 196 (262)
. .+.+.|.++.| +..+|.+++....
T Consensus 119 ~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 119 G-----MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp T-----CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred c-----CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 4 34466667776 4667888887654
No 130
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=85.51 E-value=0.16 Score=41.97 Aligned_cols=127 Identities=17% Similarity=0.149 Sum_probs=69.6
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc--ee---eeeecCCCCCCCCCccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI--VR---VADIKFPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi--VR---vADIkfpLPYR~kSFslVivSDa 165 (262)
.+||-||-.|-.....|++....+.+||++.+ ++-+-.+.......+. ++ ..|+..++ +...+|++|+.+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~D~v~~~-- 115 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR-PSFTSIDVSFIS-- 115 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC-CSEEEECCSSSC--
T ss_pred CEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC-CCEEEEEEEhhh--
Confidence 58999999999888888887656899998753 3333333222111111 11 13333322 233344444332
Q ss_pred ccccChhhhccccccchhhc-cCceEEEecCCcchhhhHHhhhhcCCc----cccccchhHHHHHHHhccc
Q 024788 166 LDYLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKFGRP----AKMRSSSWWIRYFVQTSLE 231 (262)
Q Consensus 166 LDyLspryLNkTLPeLaRvs-adglViF~G~Pgqqrakvaelskfgrp----aK~rsssWW~r~F~qt~Le 231 (262)
|.+.|+++.|+- .+|.++|.-.| |-.+.-.++.|.|.. ....+..-|.+++.++|++
T Consensus 116 --------l~~~l~~i~rvLkpgG~lv~~~~p-~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~ 177 (232)
T 3opn_A 116 --------LDLILPPLYEILEKNGEVAALIKP-QFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFS 177 (232)
T ss_dssp --------GGGTHHHHHHHSCTTCEEEEEECH-HHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEE
T ss_pred --------HHHHHHHHHHhccCCCEEEEEECc-ccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCE
Confidence 378999999985 46777765444 222323344454431 1122444566677776664
No 131
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=85.48 E-value=0.35 Score=37.85 Aligned_cols=103 Identities=10% Similarity=0.050 Sum_probs=65.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh---hhcceeeeeecCCCCC-CCCC-ccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV---HKGIVRVADIKFPLPY-RAKS-FPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv---rKGiVRvADIkfpLPY-R~kS-FslVivSDa 165 (262)
.+||-+|-.|-.+.-.+++....+..|||..+ ++-+..|++..- .+--+..+|+.-.+|. ...+ |++|+....
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~ 134 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPP 134 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCC
Confidence 58999999888776667776666888988653 444555554321 1112445666433443 3568 998886544
Q ss_pred ccccChhhhccccccchh---hccCceEEEecCCcc
Q 024788 166 LDYLSPKYLNKTLPDLAR---VASDGVLIFAGYPGQ 198 (262)
Q Consensus 166 LDyLspryLNkTLPeLaR---vsadglViF~G~Pgq 198 (262)
|- ...+.+.+.++.+ +..+|+++++-.|.+
T Consensus 135 --~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 135 --FH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp --SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred --CC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 22 3345566777744 678899998887765
No 132
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=85.37 E-value=1.7 Score=37.50 Aligned_cols=145 Identities=13% Similarity=0.113 Sum_probs=89.6
Q ss_pred hHHHHHhc--cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCcc
Q 024788 82 PILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (262)
Q Consensus 82 P~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFs 158 (262)
+-+-+.|. ..-.+||-||-.|-.....|++.- ..+.-|++ +..+-...+.. .+=-+...|+-=|+| +. +
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D---~~~~~~~a~~~-~~v~~~~~d~~~~~p---~~-D 263 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFD---LPHVIQDAPAF-SGVEHLGGDMFDGVP---KG-D 263 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHTTCCCC-TTEEEEECCTTTCCC---CC-S
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEe---hHHHHHhhhhc-CCCEEEecCCCCCCC---CC-C
Confidence 33444553 345789999999999888888753 33445544 32222222211 111133467654777 23 9
Q ss_pred EEEecccccccChhhhccccccchhhc-cCceEEEec--CCcch-------hhhHHhhhhcC--CccccccchhHHHHHH
Q 024788 159 LVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ-------RAKVAELSKFG--RPAKMRSSSWWIRYFV 226 (262)
Q Consensus 159 lVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqq-------rakvaelskfg--rpaK~rsssWW~r~F~ 226 (262)
+|+.+.+|.++++...-+.|-++.|+= .+|.+++.- .|... .....++.-+. ...+.|+...|.+.|.
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~ 343 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAM 343 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHH
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHH
Confidence 999999999999888778888888764 567666643 23221 11223333322 2457788889999999
Q ss_pred Hhccccch
Q 024788 227 QTSLEENE 234 (262)
Q Consensus 227 qt~LeEnE 234 (262)
++|++.-+
T Consensus 344 ~AGF~~v~ 351 (368)
T 3reo_A 344 ASGFRGFK 351 (368)
T ss_dssp HTTCCEEE
T ss_pred HCCCeeeE
Confidence 99987543
No 133
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=85.28 E-value=0.36 Score=41.18 Aligned_cols=100 Identities=16% Similarity=0.113 Sum_probs=66.8
Q ss_pred ceeeeecCCcchhhhhcccccc-cccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccc-
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY- 168 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~-tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy- 168 (262)
.+||.+|-.+..+...|.+... .+..|||... ++-+..+++..--..-+..+|+- ..+ ..+|++||....+.+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~-~~~--~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVF-SEV--KGRFDMIISNPPFHDG 274 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTT-TTC--CSCEEEEEECCCCCSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccc-ccc--cCCeeEEEECCCcccC
Confidence 4899999999998888877653 4788888654 45555555443222335566762 223 679999999887765
Q ss_pred --cChhhhccccccchhh-ccCceEEEecC
Q 024788 169 --LSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (262)
Q Consensus 169 --LspryLNkTLPeLaRv-sadglViF~G~ 195 (262)
.+.....+.|-++.|+ ..+|.+++..+
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 2344455667777775 56788888764
No 134
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=85.25 E-value=1.4 Score=33.19 Aligned_cols=108 Identities=13% Similarity=0.118 Sum_probs=63.1
Q ss_pred ccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEecc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSD 164 (262)
.-.+||-+|..+-.....|++. ...+..|||..+ ++-+..+++..- .+=-+..+|+.-..++-..+|++|+..-
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 3358999999998877777776 346888988653 344444443321 1112455675433335558999998653
Q ss_pred cc-c------ccChhhhccccccchhh-ccCceEEEecCCcc
Q 024788 165 AL-D------YLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQ 198 (262)
Q Consensus 165 aL-D------yLspryLNkTLPeLaRv-sadglViF~G~Pgq 198 (262)
.+ . ...+...-+.|-++.|+ ..+|.++++.+++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~ 143 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGG 143 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBT
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCC
Confidence 22 0 01121222356666664 56788888876653
No 135
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=85.12 E-value=0.76 Score=35.99 Aligned_cols=94 Identities=18% Similarity=0.195 Sum_probs=59.2
Q ss_pred ceeeeecCCcchhhhhcccccc-------cccccccccc--ccchhHHHHhhh------hhcceeeeeecCCCCCCCCCc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEE-------TEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLPYRAKSF 157 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~-------tEAWGVEPyd--ied~d~~CKsLv------rKGiVRvADIkfpLPYR~kSF 157 (262)
.+||.||-.+......|.+.-. .+..|||+.+ ++-+..+.+.+- ..=-+..+|+.-++|- ..+|
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~f 164 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-NAPY 164 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-GCSE
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-CCCc
Confidence 4899999999777766665332 4788988654 344544444331 1112456777665443 2689
Q ss_pred cEEEecccccccChhhhccccccchh-hccCceEEEecC
Q 024788 158 PLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGY 195 (262)
Q Consensus 158 slVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G~ 195 (262)
++|++..++.++. .++.| +..+|.++++=.
T Consensus 165 D~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 165 NAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred cEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 9999999887654 33444 345777776544
No 136
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=84.72 E-value=1.5 Score=37.71 Aligned_cols=95 Identities=15% Similarity=0.200 Sum_probs=62.4
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---e--eeeeec-CCCCCCCCCccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---V--RVADIK-FPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi---V--RvADIk-fpLPYR~kSFslVivSDa 165 (262)
.+||-||-.|-.+...+.+....+..|||+.++ + ..++..++ .|+ | ..+|+. +++| .+|++||....
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~--~-~~a~~~~~~~~l~~~v~~~~~d~~~~~~~---~~~D~Ivs~~~ 125 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTM--A-QHAEVLVKSNNLTDRIVVIPGKVEEVSLP---EQVDIIISEPM 125 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTH--H-HHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEEEECCC
T ss_pred CEEEEcCCCccHHHHHHHhCCCCEEEEECCHHH--H-HHHHHHHHHcCCCCcEEEEEcchhhCCCC---CceeEEEEeCc
Confidence 589999999988887777776678999999753 3 34444443 243 3 345543 2444 57999988777
Q ss_pred ccccChhhhccccccchhh-ccCceEEEe
Q 024788 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~ 193 (262)
+.++....+-.++-++.|+ ..+|++|+.
T Consensus 126 ~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 126 GYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 7777655444455555554 567777754
No 137
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=84.62 E-value=1.2 Score=35.26 Aligned_cols=123 Identities=17% Similarity=0.265 Sum_probs=72.1
Q ss_pred HHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc--e--eeeeecCCCC--CCC
Q 024788 84 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI--V--RVADIKFPLP--YRA 154 (262)
Q Consensus 84 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGi--V--RvADIkfpLP--YR~ 154 (262)
++..||..-..||-||-.|-.....|.+.- +.+..|||..+ ++-+..+.+ +.|+ | ..+|+.- || +..
T Consensus 31 ~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~---~~~~~nv~~~~~d~~~-l~~~~~~ 106 (213)
T 2fca_A 31 WNTVFGNDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVK---DSEAQNVKLLNIDADT-LTDVFEP 106 (213)
T ss_dssp HHHHHTSCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH---HSCCSSEEEECCCGGG-HHHHCCT
T ss_pred HHHHcCCCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHH---HcCCCCEEEEeCCHHH-HHhhcCc
Confidence 445678777899999999988887777653 57888998764 223333332 2343 3 3356543 33 456
Q ss_pred CCccEEEecccccccChhh----h--ccccccchh-hccCceEEEec-CCcchhhhHHhhhhcC
Q 024788 155 KSFPLVIVSDALDYLSPKY----L--NKTLPDLAR-VASDGVLIFAG-YPGQQRAKVAELSKFG 210 (262)
Q Consensus 155 kSFslVivSDaLDyLspry----L--NkTLPeLaR-vsadglViF~G-~Pgqqrakvaelskfg 210 (262)
.+|+.|++.-...|...+. | -..|.+++| +..+|.++|+. .+.+...-..++.+.|
T Consensus 107 ~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g 170 (213)
T 2fca_A 107 GEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYG 170 (213)
T ss_dssp TSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 7899887532211221111 1 223556666 46778888765 5555544455566654
No 138
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=84.32 E-value=0.79 Score=39.79 Aligned_cols=117 Identities=20% Similarity=0.197 Sum_probs=64.7
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhh---c------ceeee
Q 024788 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHK---G------IVRVA 144 (262)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrK---G------iVRvA 144 (262)
.|.+..+|.+.. ..-++||.||-.+..+...|++.. ..+..+||.-+ ++-..|+.-..+ | -+.++
T Consensus 95 ~e~l~~l~l~~~---~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~Ar~~~~~~~~~~~~~rv~~~~~ 169 (314)
T 2b2c_A 95 QEMLAHLPMFAH---PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDE--MVIDVAKKFLPGMSCGFSHPKLDLFCG 169 (314)
T ss_dssp HHHHHHHHHHHS---SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCH--HHHHHHHHHCTTTSGGGGCTTEEEECS
T ss_pred HHHHHHHHHhhC---CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHHhccccCCCCEEEEEC
Confidence 456666665432 234789999999999999998863 45666776532 122233332221 2 24556
Q ss_pred eecCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEe-cCCc
Q 024788 145 DIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFA-GYPG 197 (262)
Q Consensus 145 DIkfpLPYR~kSFslVivSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~-G~Pg 197 (262)
|..-.|+....+|++||+ |+.|.+.|. .| ...+-++.| +..+|++++. |.|-
T Consensus 170 D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 170 DGFEFLKNHKNEFDVIIT-DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp CHHHHHHHCTTCEEEEEE-CCC-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred hHHHHHHhcCCCceEEEE-cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 764334445678998885 877665442 12 344445554 4567877775 3554
No 139
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=84.15 E-value=0.41 Score=40.93 Aligned_cols=117 Identities=19% Similarity=0.216 Sum_probs=68.3
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh---hc-------ceee
Q 024788 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---KG-------IVRV 143 (262)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr---KG-------iVRv 143 (262)
.|.+..+|.+.- ..-.+||.||-.++.+...|++.. ..+..|||.-+ ++-..|+.-.. .| -+.+
T Consensus 64 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~ar~~~~~~~~~~~~~~~v~~~~ 138 (314)
T 1uir_A 64 HETLVHPAMLTH---PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDG--ELVEVAKRHMPEWHQGAFDDPRAVLVI 138 (314)
T ss_dssp HHHHHHHHHHHS---SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCH--HHHHHHHHHCHHHHTTGGGCTTEEEEE
T ss_pred HHHHHHHHHhcC---CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCH--HHHHHHHHHhHhhccccccCCceEEEE
Confidence 355555565432 234789999999999999999863 45677777543 12223332221 12 2456
Q ss_pred eeecCCCCCCCCCccEEEeccccccc---Ch-hh--hccccccchh-hccCceEEEe-cCCc
Q 024788 144 ADIKFPLPYRAKSFPLVIVSDALDYL---SP-KY--LNKTLPDLAR-VASDGVLIFA-GYPG 197 (262)
Q Consensus 144 ADIkfpLPYR~kSFslVivSDaLDyL---sp-ry--LNkTLPeLaR-vsadglViF~-G~Pg 197 (262)
+|+.--|+....+|++||+ |..+.. .| .. ....+-++.| +..+|++++. |.|.
T Consensus 139 ~D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 199 (314)
T 1uir_A 139 DDARAYLERTEERYDVVII-DLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMIL 199 (314)
T ss_dssp SCHHHHHHHCCCCEEEEEE-ECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEEC
T ss_pred chHHHHHHhcCCCccEEEE-CCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 7765435555788999887 666654 32 11 1233444554 4667887765 4443
No 140
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=83.76 E-value=0.32 Score=35.31 Aligned_cols=103 Identities=14% Similarity=0.057 Sum_probs=62.6
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCC---CCCccEEEecccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYR---AKSFPLVIVSDAL 166 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR---~kSFslVivSDaL 166 (262)
-.+||-+|..+......|.+.... ..|||..+ ++-+..+.+..--+--+..+|+.-.+|.- ..+|++|+.....
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 358999999999888777776544 88887643 23333333321102234556665444432 2379998876543
Q ss_pred cccChhhhccccccch--h-hccCceEEEecCCcch
Q 024788 167 DYLSPKYLNKTLPDLA--R-VASDGVLIFAGYPGQQ 199 (262)
Q Consensus 167 DyLspryLNkTLPeLa--R-vsadglViF~G~Pgqq 199 (262)
. ..+.+.+..+. | +..+|+++++-.+.+.
T Consensus 121 ~----~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 121 A----MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp T----SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred c----hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 2 33445566665 4 5678888887766554
No 141
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=83.75 E-value=1.1 Score=40.04 Aligned_cols=110 Identities=14% Similarity=0.187 Sum_probs=74.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeeecCC---CCCCCCCccEEEecccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFP---LPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfp---LPYR~kSFslVivSDaL 166 (262)
.+||-+|-.+-.+--.|.+. ..+.+|||..+ ++++..|.+..- .+=-+..+|+.-. +|+...+|++||+
T Consensus 288 ~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~---- 362 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL---- 362 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE----
T ss_pred CEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEE----
Confidence 57999999988877766665 67889998754 566766665321 1112455676544 4566678998875
Q ss_pred cccChhh--hccccccchhhccCceEEEecCCcchhhhHHhhhhcC
Q 024788 167 DYLSPKY--LNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFG 210 (262)
Q Consensus 167 DyLspry--LNkTLPeLaRvsadglViF~G~Pgqqrakvaelskfg 210 (262)
+|-| +...+..|++...+++|.++-+|.....-.+.|.+.|
T Consensus 363 ---dPPr~g~~~~~~~l~~~~p~~ivyvsc~p~tlard~~~l~~~G 405 (433)
T 1uwv_A 363 ---DPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAG 405 (433)
T ss_dssp ---CCCTTCCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTT
T ss_pred ---CCCCccHHHHHHHHHhcCCCeEEEEECChHHHHhhHHHHHHCC
Confidence 3444 4455667777888999999999988755555565544
No 142
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=83.63 E-value=1.4 Score=35.83 Aligned_cols=93 Identities=9% Similarity=0.055 Sum_probs=59.4
Q ss_pred ceeeeecCCcchhhhhcccc-----cccccccccccc--ccchhHHHHhhhhhcceeeeeecCC--CCCCC-CCccEEEe
Q 024788 93 HKVLHVGPDTCSVVSTLLKE-----EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFP--LPYRA-KSFPLVIV 162 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-----e~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfp--LPYR~-kSFslViv 162 (262)
.+||-||-.|-.....|.+. ...+..|||..+ ++-+. .+-.+=-+..+|+.-. ||+-. .+|++|++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 58999999988777666654 467899999765 23232 2211222456787654 56533 37999876
Q ss_pred cccccccChhhhccccccchh--hccCceEEEec
Q 024788 163 SDALDYLSPKYLNKTLPDLAR--VASDGVLIFAG 194 (262)
Q Consensus 163 SDaLDyLspryLNkTLPeLaR--vsadglViF~G 194 (262)
..+ +. .+-+.|-++.| +...|++++.-
T Consensus 159 d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 159 DNA--HA---NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp ESS--CS---SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCc--hH---hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 443 22 22346677775 77889998864
No 143
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=83.30 E-value=1.3 Score=34.33 Aligned_cols=74 Identities=11% Similarity=-0.018 Sum_probs=46.0
Q ss_pred cccceeeeecCC-cchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEec
Q 024788 90 DSMHKVLHVGPD-TCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS 163 (262)
Q Consensus 90 dsM~kVLHVGPd-tC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivS 163 (262)
..-.+||-+|-. +..+...|.+....+..|||..+ ++-+..+++..--+=-+..+|+....++...+|++||..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 345689999999 66655555544367788888643 344444444321122355677654556667899999853
No 144
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=83.22 E-value=0.83 Score=35.74 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=56.9
Q ss_pred ccceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhh-h-hhcceeeeeecCCCCCCCCCccEEEecc
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSL-V-HKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE-e-~tEAWGVEPyd--ied~d~~CKsL-v-rKGiVRvADIkfpLPYR~kSFslVivSD 164 (262)
.-.+||.+|-.+......|++. . ..+..|+|+-+ ++-+..+++.. = .+=-+..+|+.- +|+...+|++|+. |
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~~~D~v~~-~ 173 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE-AELEEAAYDGVAL-D 173 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG-CCCCTTCEEEEEE-E
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh-cCCCCCCcCEEEE-C
Confidence 3358999999998877777765 2 56788887532 33344443322 0 111234456642 3455678999986 3
Q ss_pred cccccChhhhccccccchhhc-cCceEEEec
Q 024788 165 ALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 165 aLDyLspryLNkTLPeLaRvs-adglViF~G 194 (262)
. ....+.|.++.|+- .+|.+++..
T Consensus 174 ~------~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 174 L------MEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp S------SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred C------cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 2 22346677777754 456666655
No 145
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=83.22 E-value=1.3 Score=33.74 Aligned_cols=90 Identities=14% Similarity=0.033 Sum_probs=50.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
-.+||-+|..+..+...|.+....+..|||.-+ ++.+..+++..--+--+..+|+.- +| .+|++||..-.....
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CC---CCCSEEEECCCCSSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cC---CCCCEEEEcCCCccc
Confidence 358999999999887777776555788888642 333444433211011244566643 33 489988865443333
Q ss_pred Chhhhccccccchhhc
Q 024788 170 SPKYLNKTLPDLARVA 185 (262)
Q Consensus 170 spryLNkTLPeLaRvs 185 (262)
+..-..+.|-++.|+.
T Consensus 126 ~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS 141 (207)
T ss_dssp STTTTHHHHHHHHHHC
T ss_pred cCCchHHHHHHHHHhc
Confidence 3222223344555665
No 146
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=83.12 E-value=2.1 Score=33.71 Aligned_cols=96 Identities=14% Similarity=0.025 Sum_probs=60.9
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeeeeecCCCCCCCCCccEEEeccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrK--GiVRvADIkfpLPYR~kSFslVivSDaLD 167 (262)
=.+||-+|..|-...-.|.+. ..+.+|||+.+ ++-+..+++.+--. =-+..+|+.-.++.- .+|++|+....+
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~~- 132 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGGG- 132 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSCC-
T ss_pred CCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCcc-
Confidence 358999999997776666666 77899998653 44455555433212 123456665444433 469999876644
Q ss_pred ccChhhhccccccchh-hccCceEEEecCC
Q 024788 168 YLSPKYLNKTLPDLAR-VASDGVLIFAGYP 196 (262)
Q Consensus 168 yLspryLNkTLPeLaR-vsadglViF~G~P 196 (262)
.++ .+.++.| +..+|.+++....
T Consensus 133 --~~~----~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 133 --SQA----LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp --CHH----HHHHHHHHSCTTCEEEEEECS
T ss_pred --cHH----HHHHHHHhcCCCcEEEEEecC
Confidence 222 5666666 4668888888743
No 147
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=82.49 E-value=1.2 Score=38.93 Aligned_cols=95 Identities=18% Similarity=0.318 Sum_probs=60.1
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhh-c-----ceeeeeec-CCCCCCCCCccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G-----IVRVADIK-FPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK-G-----iVRvADIk-fpLPYR~kSFslVivSDa 165 (262)
.+||-||-.|-.....|.+....+..|||+.++- ..++..+++ | -+..+|+. +++| .+|++||. +.
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~---~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~D~Iv~-~~ 137 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGARKVYAVEATKMA---DHARALVKANNLDHIVEVIEGSVEDISLP---EKVDVIIS-EW 137 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTH---HHHHHHHHHTTCTTTEEEEESCGGGCCCS---SCEEEEEE-CC
T ss_pred CEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHH---HHHHHHHHHcCCCCeEEEEECchhhcCcC---CcceEEEE-cC
Confidence 5899999999888777777766689999987432 333443332 2 23445663 3455 88999886 55
Q ss_pred ccc-cCh-hhhccccccchh-hccCceEEEec
Q 024788 166 LDY-LSP-KYLNKTLPDLAR-VASDGVLIFAG 194 (262)
Q Consensus 166 LDy-Lsp-ryLNkTLPeLaR-vsadglViF~G 194 (262)
+.| +.+ ..+.+.|-++.| +..+|++|+.-
T Consensus 138 ~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 138 MGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 444 332 345555666644 45677776643
No 148
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=82.34 E-value=1.4 Score=35.27 Aligned_cols=94 Identities=20% Similarity=0.253 Sum_probs=57.8
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhh----hhhcceeeeeecCCCCCCCCCccEEEecc
Q 024788 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSL----VHKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsL----vrKGiVRvADIkfpLPYR~kSFslVivSD 164 (262)
.+||-+|-.+-.....|++. ...+..|+|..+ ++.+..+++.. ...=-+..+|+.- +|+...+|++||. |
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~-~~~~~~~~D~v~~-~ 178 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD-SELPDGSVDRAVL-D 178 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG-CCCCTTCEEEEEE-E
T ss_pred CEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh-cCCCCCceeEEEE-C
Confidence 48999999988887777764 356788887532 34444444432 1111234466643 2444678999987 3
Q ss_pred cccccChhhhccccccchhh-ccCceEEEec
Q 024788 165 ALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 194 (262)
Q Consensus 165 aLDyLspryLNkTLPeLaRv-sadglViF~G 194 (262)
.. .| ...|.++.|+ ..+|.+++..
T Consensus 179 ~~---~~---~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 179 ML---AP---WEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp SS---CG---GGGHHHHHHHEEEEEEEEEEE
T ss_pred Cc---CH---HHHHHHHHHhCCCCCEEEEEe
Confidence 22 22 3667777775 5567666655
No 149
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=81.76 E-value=1.4 Score=34.11 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=59.3
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhh------hhhcceeeeeecCCCCCCCCCccEEE
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSL------VHKGIVRVADIKFPLPYRAKSFPLVI 161 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsL------vrKGiVRvADIkfpLPYR~kSFslVi 161 (262)
-.+||.+|-.+-.....|.+.- ..+..|||+.+ ++-+..+++.. ..+=-+..+|+.-. +....+|++|+
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~i~ 156 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEAPYDAIH 156 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGCCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-cccCCCcCEEE
Confidence 3589999999877776666542 25788888653 44455555442 11112455676533 22356799999
Q ss_pred ecccccccChhhhccccccchh-hccCceEEEecCCc
Q 024788 162 VSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGYPG 197 (262)
Q Consensus 162 vSDaLDyLspryLNkTLPeLaR-vsadglViF~G~Pg 197 (262)
+...+..+ +.++.| +..+|.++++-.|.
T Consensus 157 ~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 157 VGAAAPVV--------PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp ECSBBSSC--------CHHHHHTEEEEEEEEEEESCT
T ss_pred ECCchHHH--------HHHHHHhcCCCcEEEEEEecC
Confidence 88877543 234444 45678887765443
No 150
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=80.63 E-value=1.7 Score=36.57 Aligned_cols=109 Identities=19% Similarity=0.127 Sum_probs=60.9
Q ss_pred ceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhhh------------hhcceeeeeecCCC-CCCCC
Q 024788 93 HKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLV------------HKGIVRVADIKFPL-PYRAK 155 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e-~tEAWGVEPyd--ied~d~~CKsLv------------rKGiVRvADIkfpL-PYR~k 155 (262)
.+||-+|-.+-.....|++. . ..+..|||..+ ++-+..+.+.+- .+=-+..+|+.-.+ ++...
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~ 186 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSL 186 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCC
Confidence 48999999998877777765 2 27889988654 444555554321 11124456765433 45566
Q ss_pred CccEEEecccccccChhhhccccccchhhcc-CceEEE-ecCCcchhhhHHhhhh
Q 024788 156 SFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIF-AGYPGQQRAKVAELSK 208 (262)
Q Consensus 156 SFslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF-~G~Pgqqrakvaelsk 208 (262)
+|++||. |.. .|. ..|+++.|+=. +|.+++ .+...|...-+..+.+
T Consensus 187 ~fD~V~~-~~~---~~~---~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 187 TFDAVAL-DML---NPH---VTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRT 234 (336)
T ss_dssp -EEEEEE-CSS---STT---TTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CeeEEEE-CCC---CHH---HHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 8999886 433 332 26777777644 555554 3455555444454544
No 151
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=80.39 E-value=1.7 Score=34.82 Aligned_cols=117 Identities=17% Similarity=0.157 Sum_probs=70.7
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhh-----cc----eeeeeecCCCC--CCCCC
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHK-----GI----VRVADIKFPLP--YRAKS 156 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrK-----Gi----VRvADIkfpLP--YR~kS 156 (262)
.-.+||-||-.|......|.+.. +.+..|||..+ ++-+..+++.+-+. |+ +..+|+.-.|| +...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 45689999999999888888765 56899999764 45566666554211 32 44578765577 77889
Q ss_pred ccEEEecccccccChhhh----------ccccccchhh-ccCceEEEec-CCcchhhhHHhhhhcCC
Q 024788 157 FPLVIVSDALDYLSPKYL----------NKTLPDLARV-ASDGVLIFAG-YPGQQRAKVAELSKFGR 211 (262)
Q Consensus 157 FslVivSDaLDyLspryL----------NkTLPeLaRv-sadglViF~G-~Pgqqrakvaelskfgr 211 (262)
|+.|++.+ -.|-+- -..|.+++|+ ..+|+++++. ...........+...|+
T Consensus 129 ~d~v~~~~----p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 129 LSKMFFCF----PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEEES----CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred cCEEEEEC----CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 99998543 223211 1234455554 4467777643 43333333445555554
No 152
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=80.34 E-value=1.1 Score=35.30 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=63.2
Q ss_pred ceeeeecCCcchhhhhcccc--ccccccccccccc--cchhHHHHhhhhhcceeeeeecCC--CCCCCCCccEEEecccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFP--LPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPydi--ed~d~~CKsLvrKGiVRvADIkfp--LPYR~kSFslVivSDaL 166 (262)
.+||-+|-.|-.....|++. ...+..|||+.+- +++-.+++.. ..=-+..+|+.-+ +|.-..+|++|+. |..
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~-~~~ 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFA-DVA 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEE-CCC
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEE-cCC
Confidence 58999999998888888776 3468899987642 4555555543 1112345777653 4555679999886 443
Q ss_pred cccChhhhccccccchhh-ccCceEEEecCC
Q 024788 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYP 196 (262)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~P 196 (262)
.|......+.++.|+ ..+|.++++=.|
T Consensus 157 ---~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 157 ---QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp ---CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ---CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 444333346666654 557777775343
No 153
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=79.73 E-value=1.1 Score=35.62 Aligned_cols=107 Identities=12% Similarity=0.065 Sum_probs=62.1
Q ss_pred ccceeeeecCCcchhhhhcccc---ccccccccccc--cccchhHHHHhh------------------------------
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKE---EETEAWGVEPY--DIEDADARCKSL------------------------------ 135 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE---e~tEAWGVEPy--died~d~~CKsL------------------------------ 135 (262)
.-.+||.+|=.|-.+...|.+. ...+..|||.- -++-+..+.+..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 3468999998888776666654 35677887643 344444444432
Q ss_pred ---hhhcc----------eeeeeecCCCCC----CCCCccEEEecccccccCh-------hhhccccccchh-hccCceE
Q 024788 136 ---VHKGI----------VRVADIKFPLPY----RAKSFPLVIVSDALDYLSP-------KYLNKTLPDLAR-VASDGVL 190 (262)
Q Consensus 136 ---vrKGi----------VRvADIkfpLPY----R~kSFslVivSDaLDyLsp-------ryLNkTLPeLaR-vsadglV 190 (262)
|+.++ +..+|+.-+++. ...+|++||..-.+-+... ..+.+.+.++.| +..+|++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 22111 667787655542 3458998876433332221 222344555555 4678999
Q ss_pred EEecCCc
Q 024788 191 IFAGYPG 197 (262)
Q Consensus 191 iF~G~Pg 197 (262)
+|++..-
T Consensus 211 ~~~~~~~ 217 (250)
T 1o9g_A 211 AVTDRSR 217 (250)
T ss_dssp EEEESSS
T ss_pred EEeCcch
Confidence 9977543
No 154
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=78.83 E-value=2.8 Score=36.33 Aligned_cols=101 Identities=11% Similarity=0.051 Sum_probs=60.8
Q ss_pred cceeeeecCCcchhhhhcccccc-cccccccc--ccccchhHHHHhhhhhcc----eeeeeecCCCCC-CCCCccEEEec
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEE-TEAWGVEP--YDIEDADARCKSLVHKGI----VRVADIKFPLPY-RAKSFPLVIVS 163 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~-tEAWGVEP--ydied~d~~CKsLvrKGi----VRvADIkfpLPY-R~kSFslVivS 163 (262)
-.+||-+| .|..+.-.|.+... .+..|||. --++-+..|++.+ |+ +..+|+.-+||- -..+|++||+.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~---g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI---GYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH---TCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc---CCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 46899999 98877666655543 67888874 3345555565532 43 456788777875 35689998864
Q ss_pred ccccccChhhhccccccchhhccC-c-eEEEecCC--cch
Q 024788 164 DALDYLSPKYLNKTLPDLARVASD-G-VLIFAGYP--GQQ 199 (262)
Q Consensus 164 DaLDyLspryLNkTLPeLaRvsad-g-lViF~G~P--gqq 199 (262)
-..- +.-+.+-|.+..|+-.. | +++|+=.. ++.
T Consensus 249 ~p~~---~~~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~ 285 (373)
T 2qm3_A 249 PPET---LEAIRAFVGRGIATLKGPRCAGYFGITRRESSL 285 (373)
T ss_dssp CCSS---HHHHHHHHHHHHHTBCSTTCEEEEEECTTTCCH
T ss_pred CCCc---hHHHHHHHHHHHHHcccCCeEEEEEEecCcCCH
Confidence 2111 11134445566666554 7 54555433 554
No 155
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=78.52 E-value=2.3 Score=34.18 Aligned_cols=112 Identities=15% Similarity=0.150 Sum_probs=70.3
Q ss_pred HHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc--ee--eeeecCCCC--CCC
Q 024788 84 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI--VR--VADIKFPLP--YRA 154 (262)
Q Consensus 84 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGi--VR--vADIkfpLP--YR~ 154 (262)
+.+.||..-..||-||-.+-.....|.+.. +....|||+++ ++.+-.+++ +.|+ |+ .+|+.-.|| +..
T Consensus 27 ~~~~f~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~---~~~l~nv~~~~~Da~~~l~~~~~~ 103 (218)
T 3dxy_A 27 FPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAH---EEGLSNLRVMCHDAVEVLHKMIPD 103 (218)
T ss_dssp HHHHHSSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH---HTTCSSEEEECSCHHHHHHHHSCT
T ss_pred HHHHcCCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHH---HhCCCcEEEEECCHHHHHHHHcCC
Confidence 567788888899999999988887777654 56799999875 233433333 2343 44 356543333 557
Q ss_pred CCccEEEecccccccChhhhc------cccccchh-hccCceEEEecCCcc
Q 024788 155 KSFPLVIVSDALDYLSPKYLN------KTLPDLAR-VASDGVLIFAGYPGQ 198 (262)
Q Consensus 155 kSFslVivSDaLDyLspryLN------kTLPeLaR-vsadglViF~G~Pgq 198 (262)
.||+.|++.=..-|-..+..- ..|.+++| +..+|+++|+-.+.+
T Consensus 104 ~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~ 154 (218)
T 3dxy_A 104 NSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP 154 (218)
T ss_dssp TCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred CChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 899999875111122222221 25667777 677888888775544
No 156
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=78.14 E-value=3 Score=32.05 Aligned_cols=101 Identities=17% Similarity=0.124 Sum_probs=56.3
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHH-hhhhhc----ceeeeeecCCCCCCCCCccEEEe
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCK-SLVHKG----IVRVADIKFPLPYRAKSFPLVIV 162 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CK-sLvrKG----iVRvADIkfpLPYR~kSFslViv 162 (262)
.-.+||-||-.|......|.+.. ..+..|||+.+ ++.+-.+.+ ..-+.| -+..+|+.- +|+-..+ ..|.+
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~-l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER-LPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT-CCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh-CCCCCCC-CEEEE
Confidence 44679999999998888887754 67899998765 222221111 111233 245677754 6665444 55442
Q ss_pred cccccccChhhh---ccccccchhh-ccCceEEEe
Q 024788 163 SDALDYLSPKYL---NKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 163 SDaLDyLspryL---NkTLPeLaRv-sadglViF~ 193 (262)
.=...-+-..++ .+.|.++.|+ ..+|.++++
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 110000000111 5667788886 456777764
No 157
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=78.07 E-value=0.56 Score=35.05 Aligned_cols=72 Identities=14% Similarity=0.037 Sum_probs=39.8
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCC---CCCCccEEEe
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY---RAKSFPLVIV 162 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPY---R~kSFslViv 162 (262)
.-.+||-+|-.|......|.+.. ..+..|||..+ ++-+..+++..-.+--+..+|+.-+++- ...+|++|+.
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 44689999999998888887764 45788888643 4445555443211222445666554432 2389999987
No 158
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=77.90 E-value=9.3 Score=32.95 Aligned_cols=145 Identities=10% Similarity=0.093 Sum_probs=89.2
Q ss_pred hHHHHHhc--cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCcc
Q 024788 82 PILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (262)
Q Consensus 82 P~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFs 158 (262)
+-+-+.|. ..-.+||-||-.|-.....|++.- +.+.-++ |+..+-...+.. .+=-+...|+--|+| +. +
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~-~~v~~~~~D~~~~~p---~~-D 261 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNF---DLPHVISEAPQF-PGVTHVGGDMFKEVP---SG-D 261 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHTTCCCC-TTEEEEECCTTTCCC---CC-S
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEe---cCHHHHHhhhhc-CCeEEEeCCcCCCCC---CC-C
Confidence 44445553 345789999999999888888753 3333333 333322222221 111233467644777 23 9
Q ss_pred EEEecccccccChhhhccccccchhh-ccCceEEEec--CCcch-------hhhHHhhhhc--CCccccccchhHHHHHH
Q 024788 159 LVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPGQQ-------RAKVAELSKF--GRPAKMRSSSWWIRYFV 226 (262)
Q Consensus 159 lVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G--~Pgqq-------rakvaelskf--grpaK~rsssWW~r~F~ 226 (262)
+|+.+.+|.++++...-+.|-++.|+ ..+|.+++.- .|.+. -....++.-. --..+.|+...|.+.|.
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~ 341 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALAR 341 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHH
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHH
Confidence 99999999999988888888888886 4577666643 23221 0112233222 13457788899999999
Q ss_pred Hhccccch
Q 024788 227 QTSLEENE 234 (262)
Q Consensus 227 qt~LeEnE 234 (262)
++|++.-+
T Consensus 342 ~AGF~~v~ 349 (364)
T 3p9c_A 342 GAGFTGVK 349 (364)
T ss_dssp HTTCCEEE
T ss_pred HCCCceEE
Confidence 99987543
No 159
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=77.85 E-value=4.6 Score=32.72 Aligned_cols=94 Identities=11% Similarity=0.129 Sum_probs=56.4
Q ss_pred ceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEecccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e-~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaL 166 (262)
.+||-+|-.+......|++. . ..+..|+|..+ ++-+..+.+..- .+=-+...|+.-.+ ...+|++|+. |
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~V~~-~-- 188 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF--DEKDVDALFL-D-- 188 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC--SCCSEEEEEE-C--
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc--cCCccCEEEE-C--
Confidence 48999999997777777765 3 56788887543 333444443321 11123456665443 3468999886 3
Q ss_pred cccChhhhccccccchhh-ccCceEEEecC
Q 024788 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (262)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~ 195 (262)
|.+..+.|.++.|+ ..+|.+++.-.
T Consensus 189 ----~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 189 ----VPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp ----CSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 33445667777775 45666666543
No 160
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=77.69 E-value=1.1 Score=38.21 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=67.6
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-------ceeeeee-------cCCCCCCCCC
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-------IVRVADI-------KFPLPYRAKS 156 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-------iVRvADI-------kfpLPYR~kS 156 (262)
.+||-||=.|-....++++....+..||++.+ |+.|....+..-.+. -.+++|+ ..+-|+-..+
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~ 129 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGK 129 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSC
T ss_pred CeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCC
Confidence 57999998887777777777667788888764 455555544321110 1346666 1222344679
Q ss_pred ccEEEeccccccc-Chhhhccccccchhhcc-CceEEEec
Q 024788 157 FPLVIVSDALDYL-SPKYLNKTLPDLARVAS-DGVLIFAG 194 (262)
Q Consensus 157 FslVivSDaLDyL-spryLNkTLPeLaRvsa-dglViF~G 194 (262)
|++|+...+|-|+ ++.-+.+.|-+++|+=. .|++|++-
T Consensus 130 FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 130 FNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp EEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9999999999886 44456789999999654 56666654
No 161
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=77.45 E-value=0.99 Score=34.99 Aligned_cols=96 Identities=15% Similarity=0.066 Sum_probs=58.9
Q ss_pred ceeeeecCCcchhhhhccccc------ccccccccccc--ccchhHHHHhhh------hhcceeeeeecCCCC---CCCC
Q 024788 93 HKVLHVGPDTCSVVSTLLKEE------ETEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLP---YRAK 155 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe------~tEAWGVEPyd--ied~d~~CKsLv------rKGiVRvADIkfpLP---YR~k 155 (262)
.+||.||-.+......|.+.- +.+..|||+.+ ++-+..+++..- .+=-+..+|+.-.+| ....
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 589999999877666666543 35888998754 344444444331 111244566654331 3456
Q ss_pred CccEEEecccccccChhhhccccccchh-hccCceEEEecCC
Q 024788 156 SFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGYP 196 (262)
Q Consensus 156 SFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G~P 196 (262)
+|++|++...+..+ +.++.+ +..+|.++++-.|
T Consensus 162 ~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 162 LFDAIHVGASASEL--------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEEE
T ss_pred CcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEcc
Confidence 89999998887653 344444 3557777776544
No 162
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=77.40 E-value=1.7 Score=34.69 Aligned_cols=94 Identities=17% Similarity=0.139 Sum_probs=56.4
Q ss_pred ceeeeecCCcchhhhhccccc-cccccccccccc--cchhHHHHhhhhhcc-eeeeeecCC---CCCCCCCccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLVHKGI-VRVADIKFP---LPYRAKSFPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydi--ed~d~~CKsLvrKGi-VRvADIkfp---LPYR~kSFslVivSDa 165 (262)
.+||-+|-.|-.....|.+.- ..+.+|||+.+- ++.-..++.. .++ ..++|+.-+ +|.. .+|++|+. |.
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD~V~~-~~ 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIV-EKVDLIYQ-DI 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTC-CCEEEEEE-CC
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccc-cceeEEEE-ec
Confidence 489999999887666555432 467899988752 2333444432 222 235687765 3443 78999875 43
Q ss_pred ccccChhhhccccccchhh-ccCceEEEe
Q 024788 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~ 193 (262)
..|......|.++.|+ ..+|.++++
T Consensus 135 ---~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 ---AQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp ---CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---cChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 2232222336777775 456777776
No 163
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=76.89 E-value=2.5 Score=36.44 Aligned_cols=100 Identities=20% Similarity=0.156 Sum_probs=60.6
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccc-hhHHHHhhhhhc--ceeeeeecCCCCCCCCCccEEEeccccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIED-ADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied-~d~~CKsLvrKG--iVRvADIkfpLPYR~kSFslVivSDaLDyL 169 (262)
.+||-||-.|-.....|.+....+..|||+.++-+ +..+++..--.+ -+..+|+.- +|+...+|++||......++
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~Iis~~~~~~l 146 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEE-VELPVEKVDIIISEWMGYCL 146 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTT-CCCSSSCEEEEEECCCBBTB
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHH-ccCCCCceEEEEEccccccc
Confidence 58999999999887777777667999999985322 333333221111 234456532 23436889998865433333
Q ss_pred -Chhhhccccccchhh-ccCceEEEe
Q 024788 170 -SPKYLNKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 170 -spryLNkTLPeLaRv-sadglViF~ 193 (262)
....+...|-++.|+ ..+|++|+.
T Consensus 147 ~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 147 FYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cCchhHHHHHHHHHHhCCCCCEEccc
Confidence 334555666666664 556777643
No 164
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=76.44 E-value=2.4 Score=34.26 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=63.7
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeeeeecC
Q 024788 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKF 148 (262)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIkf 148 (262)
.+..+.+-.|-.... -.+||-||-.+-.....|++. ++.+..|||..+ ++-+..+++..--.. -+..+|+.-
T Consensus 49 ~~~~~~l~~l~~~~~--~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 49 ANQGQFLALLVRLTQ--AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp HHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcC--CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 344444444433322 369999999998777666654 257888888643 444555554322111 245567644
Q ss_pred CCCCCC--CCccEEEecccccccChhhhccccccchhhccCceEEEec
Q 024788 149 PLPYRA--KSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (262)
Q Consensus 149 pLPYR~--kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (262)
.+|.-. .+|++|++ |+-.--.+.||+... ..+..+|++|+..
T Consensus 127 ~l~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~---~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 127 SLESLGECPAFDLIFI-DADKPNNPHYLRWAL---RYSRPGTLIIGDN 170 (248)
T ss_dssp HHHTCCSCCCCSEEEE-CSCGGGHHHHHHHHH---HTCCTTCEEEEEC
T ss_pred HHHhcCCCCCeEEEEE-CCchHHHHHHHHHHH---HhcCCCeEEEEeC
Confidence 444433 48999986 442111234544433 2345678888754
No 165
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=76.16 E-value=2 Score=33.54 Aligned_cols=96 Identities=15% Similarity=0.068 Sum_probs=63.2
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.+||-+|-.|-.....|.+.. .+.+|||..+ ++-+..+++..- .+--+..+|+.-.. ...+|++|+....+.+
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSPPWGG 156 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECCCCSS
T ss_pred CEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECCCcCC
Confidence 589999999998888887764 7888888653 444555554331 12235567764333 3568999997766665
Q ss_pred cChhhhccccccchhh-ccCceEEEe
Q 024788 169 LSPKYLNKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~ 193 (262)
+.+..+.+.++.|+ ..+|++|+.
T Consensus 157 --~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 --PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp --GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred --cchhhhHHHHHHhhcCCcceeHHH
Confidence 44566688888886 455655443
No 166
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=74.49 E-value=0.58 Score=34.59 Aligned_cols=104 Identities=12% Similarity=0.083 Sum_probs=62.1
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCC---CCCCCCCccEEEecc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFP---LPYRAKSFPLVIVSD 164 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfp---LPYR~kSFslVivSD 164 (262)
-.+||-+|-.+......+++....+..|||..+ ++.+..+++..- .+--+..+|+.-. +|....+|++|+...
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~ 124 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDP 124 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECC
Confidence 358999999998887778876667889998653 344555544321 1223455676433 233467899888644
Q ss_pred cccccChhhhccccccc--hh-hccCceEEEecCCcc
Q 024788 165 ALDYLSPKYLNKTLPDL--AR-VASDGVLIFAGYPGQ 198 (262)
Q Consensus 165 aLDyLspryLNkTLPeL--aR-vsadglViF~G~Pgq 198 (262)
. |. .....+.+-.+ .| +..+|++++.-.+.+
T Consensus 125 ~--~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 125 P--YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp C--GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred C--CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 3 22 22233344444 33 467788887654433
No 167
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=73.18 E-value=5 Score=34.47 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=57.5
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc-----eeeeeecCCCCCCCCCccEEEecccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi-----VRvADIkfpLPYR~kSFslVivSDaL 166 (262)
.+||-||-.|..+...|.+....+..|||+.++ -..++..++ .|+ +..+|+. .+|+...+|++||.....
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~---~~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEI---LYQAMDIIRLNKLEDTITLIKGKIE-EVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESSTH---HHHHHHHHHHTTCTTTEEEEESCTT-TSCCSCSCEEEEEECCCB
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEEChHHH---HHHHHHHHHHcCCCCcEEEEEeeHH-HhcCCCCcEEEEEEcCch
Confidence 489999999988877777766568999998753 233343332 232 3445653 234446789998865421
Q ss_pred ccc-Chhhhccccccchhh-ccCceEE
Q 024788 167 DYL-SPKYLNKTLPDLARV-ASDGVLI 191 (262)
Q Consensus 167 DyL-spryLNkTLPeLaRv-sadglVi 191 (262)
..| ....+...|-++.|+ ..+|++|
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 112 123344555555564 4567766
No 168
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=73.05 E-value=2.7 Score=36.94 Aligned_cols=131 Identities=14% Similarity=0.120 Sum_probs=73.2
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc-cccch-hHHHHhhhhhcceeeeeecC-CCCCCCCCccEEEeccccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY-DIEDA-DARCKSLVHKGIVRVADIKF-PLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPy-died~-d~~CKsLvrKGiVRvADIkf-pLPYR~kSFslVivSDaLDyL 169 (262)
..||-+|-.|-..-..|++....+.+||+.- +|=+. -.+=...+......+.++.. .||. .+|++|++ |.. +.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~--~~fD~v~~-d~s-f~ 162 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTE--GLPSFASI-DVS-FI 162 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTT--CCCSEEEE-CCS-SS
T ss_pred cEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCC--CCCCEEEE-Eee-Hh
Confidence 5799999999988888888877789999884 33332 11000000000001111111 1332 36998875 543 22
Q ss_pred ChhhhccccccchhhccC-ceEEEecCCcchhhhHHhhhhcCC---cc-ccccchhHHHHHHHhccc
Q 024788 170 SPKYLNKTLPDLARVASD-GVLIFAGYPGQQRAKVAELSKFGR---PA-KMRSSSWWIRYFVQTSLE 231 (262)
Q Consensus 170 spryLNkTLPeLaRvsad-glViF~G~Pgqqrakvaelskfgr---pa-K~rsssWW~r~F~qt~Le 231 (262)
.|.+.||++.|+-.. |.+|+.=.|--. +.-.++.|.|- |. ..+.-..|..++.+.|++
T Consensus 163 ---sl~~vL~e~~rvLkpGG~lv~lvkPqfe-~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~ 225 (291)
T 3hp7_A 163 ---SLNLILPALAKILVDGGQVVALVKPQFE-AGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFS 225 (291)
T ss_dssp ---CGGGTHHHHHHHSCTTCEEEEEECGGGT-SCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEE
T ss_pred ---hHHHHHHHHHHHcCcCCEEEEEECcccc-cChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCE
Confidence 469999999998664 566665344322 32235556664 22 122455677777777764
No 169
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=72.90 E-value=1.6 Score=34.68 Aligned_cols=98 Identities=12% Similarity=0.186 Sum_probs=59.3
Q ss_pred cceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhh--hcceeeeeecCCCC-CCCCCccEEEeccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLP-YRAKSFPLVIVSDA 165 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsLvr--KGiVRvADIkfpLP-YR~kSFslVivSDa 165 (262)
-.+||-+|-.+-.....|.+. ...+..|||..+ ++-+..+++..-- +=-+..+|+.-.+| .-..+|++|++.-.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 368999999998877777763 267788888643 4445555543321 11355678765566 65789999985422
Q ss_pred ccccChhhhccccccchhhccCceEEEe
Q 024788 166 LDYLSPKYLNKTLPDLARVASDGVLIFA 193 (262)
Q Consensus 166 LDyLspryLNkTLPeLaRvsadglViF~ 193 (262)
.+ --+.+|+...+ .+..+|++|+.
T Consensus 152 ~~-~~~~~l~~~~~---~LkpgG~lv~d 175 (232)
T 3ntv_A 152 KA-QSKKFFEIYTP---LLKHQGLVITD 175 (232)
T ss_dssp SS-SHHHHHHHHGG---GEEEEEEEEEE
T ss_pred HH-HHHHHHHHHHH---hcCCCeEEEEe
Confidence 11 12334443332 24567888773
No 170
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=72.76 E-value=3.7 Score=33.04 Aligned_cols=119 Identities=13% Similarity=0.071 Sum_probs=66.3
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeeeeecCCCC-CCCCCccEEEecccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLP-YRAKSFPLVIVSDAL 166 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrK--GiVRvADIkfpLP-YR~kSFslVivSDaL 166 (262)
-.+||-+|-.|-.+--.|.+....+.+|||.-+ ++-+..|++..--. --+..+|+.-..+ +...+|++||..--.
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 458999999988777777766555888888643 34455555432211 2345577764443 457899999873111
Q ss_pred ------cccCh------------hhhccccccchh-hccCceEEEecCCcchhhhHHhhhhcC
Q 024788 167 ------DYLSP------------KYLNKTLPDLAR-VASDGVLIFAGYPGQQRAKVAELSKFG 210 (262)
Q Consensus 167 ------DyLsp------------ryLNkTLPeLaR-vsadglViF~G~Pgqqrakvaelskfg 210 (262)
...+| .-+...+-.+.| +..+|.+++.-.|.+...-...+.+.|
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~ 192 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYR 192 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTT
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCC
Confidence 11111 112233444444 456788888765655433334444433
No 171
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=71.39 E-value=2.2 Score=33.17 Aligned_cols=96 Identities=15% Similarity=0.162 Sum_probs=58.8
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCC--CCCCccEEEecccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY--RAKSFPLVIVSDAL 166 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPY--R~kSFslVivSDaL 166 (262)
.+||-+|..+......|.+. ...+..|||+.+ ++++..+++.. ..=-+..+|+.-+..+ -..+|++|+ +|..
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~-~~~~ 152 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIF-EDVA 152 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEE-ECCC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEE-ECCC
Confidence 48999999998777777654 246788887654 34555555544 1222445777654322 235899988 4443
Q ss_pred cccChhhhccccccchhh-ccCceEEEe
Q 024788 167 DYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~ 193 (262)
.|......+.++.|+ ..+|.++++
T Consensus 153 ---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 153 ---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 443333336777765 456777776
No 172
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=70.81 E-value=2.9 Score=32.65 Aligned_cols=101 Identities=11% Similarity=0.011 Sum_probs=59.5
Q ss_pred cceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeeeeecCCCCCCC-----CCccEE
Q 024788 92 MHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRA-----KSFPLV 160 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIkfpLPYR~-----kSFslV 160 (262)
-++||-+|-.+-...-.|.+. .+.+.+|||..+ ++-+..+++..--.. -+..+|..-.||.-. .+|++|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 368999999887776666653 367889998754 444555554332111 245567633344433 689999
Q ss_pred EecccccccChhhhccccccchhhccCceEEEec
Q 024788 161 IVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (262)
Q Consensus 161 ivSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (262)
++.-......+ ++ +.+-.+..+..+|++++..
T Consensus 139 ~~d~~~~~~~~-~~-~~~~~~~~LkpgG~lv~~~ 170 (221)
T 3u81_A 139 FLDHWKDRYLP-DT-LLLEKCGLLRKGTVLLADN 170 (221)
T ss_dssp EECSCGGGHHH-HH-HHHHHTTCCCTTCEEEESC
T ss_pred EEcCCcccchH-HH-HHHHhccccCCCeEEEEeC
Confidence 86543433221 11 2222334567888888865
No 173
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=69.80 E-value=1.8 Score=33.89 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=56.4
Q ss_pred ceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhh--hcceeeeeecCCCCCC--CCCccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYR--AKSFPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvr--KGiVRvADIkfpLPYR--~kSFslVivSDa 165 (262)
.+||-+|-.+......|.+.- ..+..|||+.+ ++-+..+++.+-- +=-+..+|+.-.+|.- ..+|++|++...
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~ 135 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAA 135 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGG
T ss_pred CEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCC
Confidence 489999999877766666543 56788888643 3334444433211 1123446665545544 578999987554
Q ss_pred ccccChhhhccccccchhhccCceEEEe
Q 024788 166 LDYLSPKYLNKTLPDLARVASDGVLIFA 193 (262)
Q Consensus 166 LDyLspryLNkTLPeLaRvsadglViF~ 193 (262)
.+ -.+++|+.... .+..+|++++.
T Consensus 136 ~~-~~~~~l~~~~~---~L~pgG~lv~~ 159 (233)
T 2gpy_A 136 KG-QYRRFFDMYSP---MVRPGGLILSD 159 (233)
T ss_dssp GS-CHHHHHHHHGG---GEEEEEEEEEE
T ss_pred HH-HHHHHHHHHHH---HcCCCeEEEEE
Confidence 32 12344444332 24567888886
No 174
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=69.53 E-value=2.5 Score=35.49 Aligned_cols=114 Identities=18% Similarity=0.187 Sum_probs=65.9
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh---------hcceeee
Q 024788 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---------KGIVRVA 144 (262)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr---------KGiVRvA 144 (262)
.|.+..+|.+.- ..-.+||.+|-.++.+...+++.. ..+.-+||.-+ ++-..|+.-.. +=-+.++
T Consensus 65 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~a~~~~~~~~~~~~~~~v~~~~~ 139 (283)
T 2i7c_A 65 HEMMTHVPMTVS---KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDE--TVIEVSKIYFKNISCGYEDKRVNVFIE 139 (283)
T ss_dssp HHHHHHHHHTTS---SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH--HHHHHHHHHCTTTSGGGGSTTEEEEES
T ss_pred HHHHHHHHHhcC---CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHhHHhccccCCCcEEEEEC
Confidence 455566665421 234799999999999999998764 35666666432 12223333221 1125566
Q ss_pred eecCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEec
Q 024788 145 DIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFAG 194 (262)
Q Consensus 145 DIkfpLPYR~kSFslVivSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~G 194 (262)
|..--++-...+|++||+ |+.|...|. .| ...+-++.| +..+|++++..
T Consensus 140 D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 140 DASKFLENVTNTYDVIIV-DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CHHHHHHHCCSCEEEEEE-ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ChHHHHHhCCCCceEEEE-cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 764334433678999886 665554432 11 233344444 46788888764
No 175
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=69.19 E-value=3.3 Score=38.24 Aligned_cols=100 Identities=17% Similarity=0.151 Sum_probs=63.5
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccc--cch-------hHHHHhhhh-hcceee--e-eecCCCCC--CC
Q 024788 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDA-------DARCKSLVH-KGIVRV--A-DIKFPLPY--RA 154 (262)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydi--ed~-------d~~CKsLvr-KGiVRv--A-DIkfpLPY--R~ 154 (262)
.=.+||-+|-.|-.+...|.+.- ..+.+|||..+- +-| ..+|+.+-- -+-|++ + |..-+.|+ -.
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 34589999999999888887753 357999997652 333 555554311 023443 3 33222232 13
Q ss_pred CCccEEEecccccccChhhhccccccchhhccC-ceEEEe
Q 024788 155 KSFPLVIVSDALDYLSPKYLNKTLPDLARVASD-GVLIFA 193 (262)
Q Consensus 155 kSFslVivSDaLDyLspryLNkTLPeLaRvsad-glViF~ 193 (262)
.+|++|++++++ + . .-++..|-++.|+-.. |.+++.
T Consensus 322 ~~FDvIvvn~~l-~-~-~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 322 PQCDVILVNNFL-F-D-EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp GGCSEEEECCTT-C-C-HHHHHHHHHHHTTCCTTCEEEES
T ss_pred CCCCEEEEeCcc-c-c-ccHHHHHHHHHHhCCCCeEEEEe
Confidence 689999988777 2 2 4677888899998775 555554
No 176
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=68.74 E-value=1.7 Score=33.45 Aligned_cols=119 Identities=14% Similarity=0.110 Sum_probs=65.5
Q ss_pred chHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeeeee
Q 024788 73 CTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADI 146 (262)
Q Consensus 73 Ct~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADI 146 (262)
.+.+..+.+-.|..... -.+||-+|..+-.....|++. ...+..|||..+ ++-+..+++..--.. -+..+|+
T Consensus 48 ~~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 48 TAPEQAQLLALLVKLMQ--AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp CCHHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cCHHHHHHHHHHHHhhC--CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 44444444444444332 358999999998877777664 367888888653 444555554321111 2445666
Q ss_pred cCCCCCCC-----CCccEEEecccccccChhhhccccccchh-hccCceEEEec--CCcc
Q 024788 147 KFPLPYRA-----KSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG--YPGQ 198 (262)
Q Consensus 147 kfpLPYR~-----kSFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G--~Pgq 198 (262)
.-.+|.-. .+|++|++ |+- .....+.+.++.| +..+|++++.. ++|.
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~-~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~ 180 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYI-DAD----KANTDLYYEESLKLLREGGLIAVDNVLRRGQ 180 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEE-CSC----GGGHHHHHHHHHHHEEEEEEEEEECSSGGGG
T ss_pred HHHHHHhhhccCCCCccEEEE-CCC----HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCc
Confidence 33343322 78999984 332 2222233444444 45677877743 4443
No 177
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=67.55 E-value=5.4 Score=31.62 Aligned_cols=95 Identities=11% Similarity=0.072 Sum_probs=54.9
Q ss_pred cceeeeecCCcchhhhhccc-ccccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCC---CCCccEEEecc
Q 024788 92 MHKVLHVGPDTCSVVSTLLK-EEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYR---AKSFPLVIVSD 164 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLk-Ee~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR---~kSFslVivSD 164 (262)
-.+||-||-.|-..--.|.+ ....+..|||+.+ ++-+..+++.+=-.. -+..+|+. .+|.. ..+|++|+...
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAE-TFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHH-HHTTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHH-HhcccccccCCccEEEEec
Confidence 35899999998765544443 3456788888754 344555555431112 13344552 23332 57899988654
Q ss_pred cccccChhhhccccccchhh-ccCceEEEe
Q 024788 165 ALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 165 aLDyLspryLNkTLPeLaRv-sadglViF~ 193 (262)
+. -+...+.++.|+ ..+|.+++.
T Consensus 150 -~~-----~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 150 -VA-----RLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp -CS-----CHHHHHHHHGGGEEEEEEEEEE
T ss_pred -cC-----CHHHHHHHHHHhcCCCCEEEEE
Confidence 21 134555666554 567777765
No 178
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=66.78 E-value=7.6 Score=32.62 Aligned_cols=133 Identities=19% Similarity=0.224 Sum_probs=67.9
Q ss_pred ceeeeecCCcchhhhhcccc--ccccccccccccc--cchhHHHHhhhhhcc-eeeeeecCCCCCC--CCCccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSLVHKGI-VRVADIKFPLPYR--AKSFPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPydi--ed~d~~CKsLvrKGi-VRvADIkfpLPYR--~kSFslVivSDa 165 (262)
.+||-+|-.|-...+.|.+- .+....|||..+- ++.-..++. +.++ ...+|+.-|.+|. ..+|++|+ +|+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--r~nv~~i~~Da~~~~~~~~~~~~~D~I~-~d~ 154 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--RPNIFPLLADARFPQSYKSVVENVDVLY-VDI 154 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--CTTEEEEECCTTCGGGTTTTCCCEEEEE-ECC
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--cCCeEEEEcccccchhhhccccceEEEE-ecC
Confidence 57999988876655554432 3568899987652 232222322 1222 3457877766664 35788775 453
Q ss_pred ccccChhhhccccccchh--hccCceEEEecCCcchhhhHHhhhhcCCccccccchhHHHHHHHhccccchHHHHHHHHH
Q 024788 166 LDYLSPKYLNKTLPDLAR--VASDGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEENEPAVKKFEQA 243 (262)
Q Consensus 166 LDyLspryLNkTLPeLaR--vsadglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeEnE~a~KkFeqa 243 (262)
-. | ..-+.|.+.++ +..+|.++++= |.++-.| +..-+||++...+|-+
T Consensus 155 a~---~-~~~~il~~~~~~~LkpGG~lvisi-------------------k~~~~d~------t~~~~e~~~~~~~~L~- 204 (232)
T 3id6_C 155 AQ---P-DQTDIAIYNAKFFLKVNGDMLLVI-------------------KARSIDV------TKDPKEIYKTEVEKLE- 204 (232)
T ss_dssp CC---T-THHHHHHHHHHHHEEEEEEEEEEE-------------------C-------------CCSSSSTTHHHHHHH-
T ss_pred CC---h-hHHHHHHHHHHHhCCCCeEEEEEE-------------------ccCCccc------CCCHHHHHHHHHHHHH-
Confidence 21 1 11111222222 44455555542 2222122 3456777766655544
Q ss_pred HhhccCCCCceeeecccC
Q 024788 244 ASKKSYKPNCQVFHLKPL 261 (262)
Q Consensus 244 ~~k~sY~p~cqiFHL~s~ 261 (262)
+..|++--+ ..|.||
T Consensus 205 --~~gf~~~~~-~~l~p~ 219 (232)
T 3id6_C 205 --NSNFETIQI-INLDPY 219 (232)
T ss_dssp --HTTEEEEEE-EECTTT
T ss_pred --HCCCEEEEE-eccCCC
Confidence 235777644 467776
No 179
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=66.68 E-value=11 Score=32.04 Aligned_cols=95 Identities=18% Similarity=0.199 Sum_probs=54.6
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---e--eeeeecCCCCCCCCCccEEEecccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---V--RVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi---V--RvADIkfpLPYR~kSFslVivSDaL 166 (262)
.+||-||-.|..+...+.+....+..|||+-++ + ..++..++ .|+ | ..+|+. .+|....+|++||..-..
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~--~-~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSI--I-EMAKELVELNGFSDKITLLRGKLE-DVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESSTH--H-HHHHHHHHHTTCTTTEEEEESCTT-TSCCSSSCEEEEEECCCB
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChHHH--H-HHHHHHHHHcCCCCCEEEEECchh-hccCCCCcccEEEEeCch
Confidence 589999999988777777665568999998743 2 23333333 332 3 345553 123335789988864332
Q ss_pred cccC-hhhhccccccchhh-ccCceEE
Q 024788 167 DYLS-PKYLNKTLPDLARV-ASDGVLI 191 (262)
Q Consensus 167 DyLs-pryLNkTLPeLaRv-sadglVi 191 (262)
.+|. ..-+.+.|-++.|+ ..+|++|
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 3331 22233334444444 4567776
No 180
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=63.77 E-value=7 Score=32.81 Aligned_cols=109 Identities=17% Similarity=0.101 Sum_probs=61.4
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh----hhh-hcceeeeeec
Q 024788 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS----LVH-KGIVRVADIK 147 (262)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKs----Lvr-KGiVRvADIk 147 (262)
.|.+..+|.+. -..-++||.+|-.++.+...+++.. .+..+||.-+ ++-+..+... +-. +=-+.++|.-
T Consensus 59 ~e~l~~~~~~~---~~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~ 134 (262)
T 2cmg_A 59 SELLAHMGGCT---KKELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLD 134 (262)
T ss_dssp HHHHHHHHHTT---SSCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGG
T ss_pred HHHHHHHhhhc---CCCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHH
Confidence 44555555543 1234789999999999999999884 7777777542 1112211111 100 1123455653
Q ss_pred CCCCCCCCCccEEEecccccccChhhhccccccchh-hccCceEEEe-cCCcc
Q 024788 148 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFA-GYPGQ 198 (262)
Q Consensus 148 fpLPYR~kSFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~-G~Pgq 198 (262)
--+ .+|++||+ |+-| |.. .+.++.| +..+|++++. |.|..
T Consensus 135 ~~~----~~fD~Ii~-d~~d---p~~---~~~~~~~~L~pgG~lv~~~~~~~~ 176 (262)
T 2cmg_A 135 LDI----KKYDLIFC-LQEP---DIH---RIDGLKRMLKEDGVFISVAKHPLL 176 (262)
T ss_dssp SCC----CCEEEEEE-SSCC---CHH---HHHHHHTTEEEEEEEEEEEECTTT
T ss_pred HHH----hhCCEEEE-CCCC---hHH---HHHHHHHhcCCCcEEEEEcCCccc
Confidence 222 78998886 5433 332 3445444 4567877764 56654
No 181
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=63.03 E-value=10 Score=28.43 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=56.9
Q ss_pred cceeeeecCCcchhhhhccccc---cccccccccccccchhHHHHhhhhhcceeeeeecCCC-------C----------
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEE---ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPL-------P---------- 151 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe---~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpL-------P---------- 151 (262)
-.+||.+|-.|-.+...|.+.- ..+..|||..++... ..=.+..+|+.-.. |
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~--------~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPI--------PNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCC--------TTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCC--------CCceEEEccccchhhhhhccccccccccchhh
Confidence 3579999988877766666553 578999998885321 11123345654321 1
Q ss_pred -------CCCCCccEEEecccccccChhhh---------ccccccchhh-ccCceEEEecCCcc
Q 024788 152 -------YRAKSFPLVIVSDALDYLSPKYL---------NKTLPDLARV-ASDGVLIFAGYPGQ 198 (262)
Q Consensus 152 -------YR~kSFslVivSDaLDyLspryL---------NkTLPeLaRv-sadglViF~G~Pgq 198 (262)
+...+|++|+..-++.+...... .+.|.++.|+ ..+|.+++.-+.++
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 34568999886444444211111 1245556664 56778777554443
No 182
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=61.46 E-value=7.9 Score=33.88 Aligned_cols=117 Identities=19% Similarity=0.187 Sum_probs=65.7
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc------eeeee
Q 024788 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI------VRVAD 145 (262)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGi------VRvAD 145 (262)
.|.+..+|++.- ..-.+||.+|-.+..+...|++.. ..+..+||..+ ++-+..+.+.+ ..|+ +..+|
T Consensus 107 ~e~L~~l~l~~~---~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~-~~gl~~~rv~~~~~D 182 (334)
T 1xj5_A 107 QEMITHLPLCSI---PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDV-AIGYEDPRVNLVIGD 182 (334)
T ss_dssp HHHHHHHHHTTS---SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH-HGGGGSTTEEEEESC
T ss_pred HHHHHHHHHhhC---CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccCCCcEEEEECC
Confidence 455555555421 233689999999999999999863 45677777543 22233332221 0132 45667
Q ss_pred ecCCCC-CCCCCccEEEecccccccChhh---hccccccchh-hccCceEEEe-cCC
Q 024788 146 IKFPLP-YRAKSFPLVIVSDALDYLSPKY---LNKTLPDLAR-VASDGVLIFA-GYP 196 (262)
Q Consensus 146 IkfpLP-YR~kSFslVivSDaLDyLspry---LNkTLPeLaR-vsadglViF~-G~P 196 (262)
+.-.|+ ....+|++||+ |..|...+.. ....+.++.| +..+|++++. +.|
T Consensus 183 ~~~~l~~~~~~~fDlIi~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 183 GVAFLKNAAEGSYDAVIV-DSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp HHHHHHTSCTTCEEEEEE-CCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred HHHHHHhccCCCccEEEE-CCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 542232 23578998875 6654332211 1233444544 4578888885 454
No 183
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=59.85 E-value=4.7 Score=33.39 Aligned_cols=97 Identities=14% Similarity=0.020 Sum_probs=62.4
Q ss_pred ceeeeecCCcchhhhhcccc-ccccccccccc--cccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPY--DIEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPy--died~d~~CKsLv-rKGiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.+||-+|-.+...--.|.+. ...+.+|||.. -++.+..|++..- ..=.+..+|+.-. |. ..+|++||+.-
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~---- 194 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVADRVIMGY---- 194 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEEEEEECC----
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCceEEEECC----
Confidence 57999999998887777765 35688888864 3566666665321 1112556677544 55 67899987642
Q ss_pred cChhhhccccccchh-hccCceEEEecCCc
Q 024788 169 LSPKYLNKTLPDLAR-VASDGVLIFAGYPG 197 (262)
Q Consensus 169 LspryLNkTLPeLaR-vsadglViF~G~Pg 197 (262)
|+-+.+.|.++.| +..+|+++++-++.
T Consensus 195 --p~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 --VHKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp --CSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred --cccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 3344455555443 46788998888776
No 184
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=57.83 E-value=11 Score=30.24 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=61.8
Q ss_pred cccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcc--eee--eee-cCCCCCCCCCccEEEecc
Q 024788 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGI--VRV--ADI-KFPLPYRAKSFPLVIVSD 164 (262)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGi--VRv--ADI-kfpLPYR~kSFslVivSD 164 (262)
..=.+||-||-.+-.....|.+....+.+|||+.+ +.-..++...++.- +++ .|. ....+.-..+|..|+. |
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~--~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~-D 135 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECND--GVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY-D 135 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCH--HHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE-C
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCH--HHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEE-e
Confidence 34468999999998887777776667899999873 44444444443322 332 232 1234555788998863 4
Q ss_pred ccc-cc---Chhhhccccccchhhc-cCceEEEec
Q 024788 165 ALD-YL---SPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 165 aLD-yL---spryLNkTLPeLaRvs-adglViF~G 194 (262)
+.- .. .-.+..+.+-|++||= ..|+.+|..
T Consensus 136 ~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 321 11 1123456677888864 567777754
No 185
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=55.84 E-value=9.8 Score=33.57 Aligned_cols=103 Identities=11% Similarity=0.121 Sum_probs=64.1
Q ss_pred ceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh--hhcce--eeeeecCCCCCCCCCccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV--HKGIV--RVADIKFPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLv--rKGiV--RvADIkfpLPYR~kSFslVivSDa 165 (262)
.+||-+|-.+..+-..|.+.. ..+..|||..+ ++-+..|++..- .+.-| ..+|+--++ ...+|++||....
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~--~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV--EPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC--CTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC--CCCCeeEEEECCC
Confidence 689999999999888887765 67889998753 333444443321 11124 567776544 4678999987655
Q ss_pred ccc---cChhhhccccccchh-hccCceEEEecCCc
Q 024788 166 LDY---LSPKYLNKTLPDLAR-VASDGVLIFAGYPG 197 (262)
Q Consensus 166 LDy---LspryLNkTLPeLaR-vsadglViF~G~Pg 197 (262)
+.. +...-..+-+-++.| +..+|.+++.++..
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 422 111112234566766 57889999987443
No 186
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=55.15 E-value=8.7 Score=32.95 Aligned_cols=91 Identities=16% Similarity=0.131 Sum_probs=61.2
Q ss_pred ceeeeecCCcchhhhhcccccccccccccc--ccccchhHHHHhhhh--hcceeeeeecCCCCCCCCCccEEEecccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEP--YDIEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEP--ydied~d~~CKsLvr--KGiVRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.+||-+|-.|...--. .+ ...+.+|||. --++.+..|++..-- +--+..+|+.-.+ .+|++||+ |
T Consensus 197 ~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~-d---- 265 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIM-N---- 265 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEE-C----
T ss_pred CEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEE-C----
Confidence 5899999999887666 65 5778889884 446667777654321 1224456765433 78998885 4
Q ss_pred cChhhhccccccchhh-ccCceEEEecC
Q 024788 169 LSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (262)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~ 195 (262)
.|.+..+.+.++.++ ..+|++++..+
T Consensus 266 -pP~~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 266 -LPKFAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp -CTTTGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -CcHhHHHHHHHHHHHcCCCCEEEEEEe
Confidence 266666777777766 46788887764
No 187
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=54.64 E-value=9.1 Score=31.21 Aligned_cols=112 Identities=16% Similarity=0.148 Sum_probs=62.5
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc-----eeee
Q 024788 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVA 144 (262)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKGi-----VRvA 144 (262)
..+..+.+-.|-+..+ -++||-||-.+-...-.|.+. ++.+..|||..+ ++-+..+++. .|+ ++.+
T Consensus 64 ~~~~~~ll~~l~~~~~--~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~---~g~~~~i~~~~g 138 (247)
T 1sui_A 64 SADEGQFLSMLLKLIN--AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKK---AGVDHKIDFREG 138 (247)
T ss_dssp CHHHHHHHHHHHHHTT--CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHH---TTCGGGEEEEES
T ss_pred CHHHHHHHHHHHHhhC--cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH---cCCCCCeEEEEC
Confidence 3344444444444333 358999999988776666553 257888888754 2334444432 233 4455
Q ss_pred eecCCCCCC------CCCccEEEecccccccChhhhccccccchhhccCceEEEec
Q 024788 145 DIKFPLPYR------AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (262)
Q Consensus 145 DIkfpLPYR------~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (262)
|..--||.- ..+|++|++ |+-.--.+.||...++ .+..+|++++..
T Consensus 139 da~~~l~~l~~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~~---~LkpGG~lv~d~ 190 (247)
T 1sui_A 139 PALPVLDEMIKDEKNHGSYDFIFV-DADKDNYLNYHKRLID---LVKVGGVIGYDN 190 (247)
T ss_dssp CHHHHHHHHHHSGGGTTCBSEEEE-CSCSTTHHHHHHHHHH---HBCTTCCEEEEC
T ss_pred CHHHHHHHHHhccCCCCCEEEEEE-cCchHHHHHHHHHHHH---hCCCCeEEEEec
Confidence 654333321 468999876 4422122455554432 356788888743
No 188
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=54.44 E-value=14 Score=30.59 Aligned_cols=94 Identities=5% Similarity=-0.034 Sum_probs=59.2
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-c-eeeeeecCCCCCCCCCccEEEecccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-I-VRVADIKFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-i-VRvADIkfpLPYR~kSFslVivSDaLDy 168 (262)
.+||-+|-.|...--.+.+....+.+|||..+ ++.+..|++..--.. + +..+|+.-.++ ..+|++||. |.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--~~~fD~Vi~-~~--- 200 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILM-GY--- 200 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEE-CC---
T ss_pred CEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--cCCccEEEE-CC---
Confidence 58999999998877777766555788988643 566666665321122 2 45677755554 778999876 32
Q ss_pred cChhhhccccccchhhc-cCceEEEec
Q 024788 169 LSPKYLNKTLPDLARVA-SDGVLIFAG 194 (262)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~G 194 (262)
|....+.|+++.|+- .+|++++..
T Consensus 201 --p~~~~~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 201 --VVRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp --CSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred --chhHHHHHHHHHHHCCCCeEEEEEE
Confidence 222234555666654 456666644
No 189
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=53.83 E-value=15 Score=30.66 Aligned_cols=97 Identities=16% Similarity=0.148 Sum_probs=58.5
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEecccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaL 166 (262)
-.+||-+|-.+-.....|.+.. ..+..|||+.+ ++.+..+++..--.. -+..+|+.-.+| ...+|++|++...+
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVTVGV 154 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEECSBB
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEcCCH
Confidence 3589999999876665555442 23488888653 333444443221111 234567654444 45789999999999
Q ss_pred cccChhhhccccccch-hhccCceEEEecCCc
Q 024788 167 DYLSPKYLNKTLPDLA-RVASDGVLIFAGYPG 197 (262)
Q Consensus 167 DyLspryLNkTLPeLa-RvsadglViF~G~Pg 197 (262)
.++.. ++. .+..+|++++.-.|.
T Consensus 155 ~~~~~--------~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 155 DEVPE--------TWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp SCCCH--------HHHHHEEEEEEEEEEBCBG
T ss_pred HHHHH--------HHHHhcCCCcEEEEEECCC
Confidence 88762 232 345678877765554
No 190
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=52.90 E-value=13 Score=33.48 Aligned_cols=102 Identities=21% Similarity=0.186 Sum_probs=67.7
Q ss_pred cceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhhhcc---eeeeeecCCCCCCCCCccEEEecccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKGI---VRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPy--died~d~~CKsLvrKGi---VRvADIkfpLPYR~kSFslVivSDaL 166 (262)
-.+||-+|-.+-..-..|.+. ..+..|||.. -++++..|++. .|+ +..+|+.--+|- +|++||+ |
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~---ngl~v~~~~~d~~~~~~~---~fD~Vv~-d-- 360 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEI---NNVDAEFEVASDREVSVK---GFDTVIV-D-- 360 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH---HTCCEEEEECCTTTCCCT---TCSEEEE-C--
T ss_pred CCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHH---cCCcEEEEECChHHcCcc---CCCEEEE-c--
Confidence 358999999988877666654 5688999865 36677777653 232 455676544432 8998886 3
Q ss_pred cccChh--hhccccccchhhccCceEEEecCCcchhhhHHhh
Q 024788 167 DYLSPK--YLNKTLPDLARVASDGVLIFAGYPGQQRAKVAEL 206 (262)
Q Consensus 167 DyLspr--yLNkTLPeLaRvsadglViF~G~Pgqqrakvael 206 (262)
.|| +-.+.+..|.++..+|+|+++-+|...-...+.|
T Consensus 361 ---PPr~g~~~~~~~~l~~l~p~givyvsc~p~tlarDl~~l 399 (425)
T 2jjq_A 361 ---PPRAGLHPRLVKRLNREKPGVIVYVSCNPETFARDVKML 399 (425)
T ss_dssp ---CCTTCSCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHS
T ss_pred ---CCccchHHHHHHHHHhcCCCcEEEEECChHHHHhHHhhC
Confidence 232 1223566778889999999999997663333333
No 191
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=52.13 E-value=8.5 Score=32.55 Aligned_cols=117 Identities=21% Similarity=0.278 Sum_probs=61.6
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhh----h-hhcceeeeeec
Q 024788 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSL----V-HKGIVRVADIK 147 (262)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsL----v-rKGiVRvADIk 147 (262)
|.+..+|.+.- ..-.+||.||-.+..+...|++.. ..+..|||.-+ ++-+..+...+ . .+=-+.++|+.
T Consensus 83 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~ 159 (304)
T 3bwc_A 83 EVLGHTSLCSH---PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGL 159 (304)
T ss_dssp HHHHHHHHTTS---SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH
T ss_pred HHHhhhhhhcC---CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHH
Confidence 44444554321 233689999999999999999763 45777777542 12222222111 0 11124566763
Q ss_pred -CCCCCCCCCccEEEecccccccCh-hhh--ccccccchhh-ccCceEEEec-CC
Q 024788 148 -FPLPYRAKSFPLVIVSDALDYLSP-KYL--NKTLPDLARV-ASDGVLIFAG-YP 196 (262)
Q Consensus 148 -fpLPYR~kSFslVivSDaLDyLsp-ryL--NkTLPeLaRv-sadglViF~G-~P 196 (262)
++......+|++||+ |..++..| ..| ...+-++.|+ ..+|++++.. .|
T Consensus 160 ~~~~~~~~~~fDvIi~-d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 160 AFVRQTPDNTYDVVII-DTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp HHHHSSCTTCEEEEEE-ECC---------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred HHHHhccCCceeEEEE-CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 222223678999886 66665543 111 2334455554 5678877754 44
No 192
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=50.40 E-value=25 Score=29.40 Aligned_cols=67 Identities=13% Similarity=0.237 Sum_probs=44.4
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhhhc--ceeeeeecCCCCCCCCCc---cEEEe
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKG--IVRVADIKFPLPYRAKSF---PLVIV 162 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPy--died~d~~CKsLvrKG--iVRvADIkfpLPYR~kSF---slViv 162 (262)
.+||-+|-.|..+.-.|.++...+.+|||.. -++-+..|++.+--.+ -+..+|+--+++ .+| ++|+.
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---~~f~~~D~Ivs 198 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---EKFASIEMILS 198 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---GGTTTCCEEEE
T ss_pred CEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---cccCCCCEEEE
Confidence 4899999999888887877756678888764 3445666665442111 234567765565 578 88765
No 193
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=50.13 E-value=10 Score=30.97 Aligned_cols=79 Identities=15% Similarity=0.205 Sum_probs=45.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeee-cCCCCCCCCCccEEEeccccccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADI-KFPLPYRAKSFPLVIVSDALDYL 169 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADI-kfpLPYR~kSFslVivSDaLDyL 169 (262)
.+||-+||.|-.....|++.. .+..|||.-+ ++-+..+++.. .+--+..+|+ ++++|- ..+| +|++|.-=+.
T Consensus 32 ~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~-~~v~~~~~D~~~~~~~~-~~~~--~vv~nlPy~~ 106 (244)
T 1qam_A 32 DNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDILQFKFPK-NQSY--KIFGNIPYNI 106 (244)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCGGGCCCCS-SCCC--EEEEECCGGG
T ss_pred CEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC-CCeEEEEChHHhCCccc-CCCe--EEEEeCCccc
Confidence 579999999999888887665 6788888643 22233333321 1223455665 344432 1234 7888865444
Q ss_pred Chhhhcc
Q 024788 170 SPKYLNK 176 (262)
Q Consensus 170 spryLNk 176 (262)
+..-+.+
T Consensus 107 ~~~~l~~ 113 (244)
T 1qam_A 107 STDIIRK 113 (244)
T ss_dssp HHHHHHH
T ss_pred CHHHHHH
Confidence 4433333
No 194
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=48.83 E-value=16 Score=29.74 Aligned_cols=118 Identities=13% Similarity=0.137 Sum_probs=71.4
Q ss_pred ccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhh---hcc----eeeeeecCCCC--CCCCC
Q 024788 89 GDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH---KGI----VRVADIKFPLP--YRAKS 156 (262)
Q Consensus 89 GdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvr---KGi----VRvADIkfpLP--YR~kS 156 (262)
...-..||-||-.+-.....|.+.- +....|||+.+ ++-|..+++.|-+ .|+ +..+|+.-.|| +...+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3445689999999988887777663 57889999875 3446666665421 222 34577765566 66789
Q ss_pred ccEEEecccccccChhhh----------ccccccchhh-ccCceEEEe-cCCcchhhhHHhhhhcC
Q 024788 157 FPLVIVSDALDYLSPKYL----------NKTLPDLARV-ASDGVLIFA-GYPGQQRAKVAELSKFG 210 (262)
Q Consensus 157 FslVivSDaLDyLspryL----------NkTLPeLaRv-sadglViF~-G~Pgqqrakvaelskfg 210 (262)
|+.|++. |-.|-.- ...|-+++|+ ..+|.++|+ ..+.....-..++.+.|
T Consensus 124 ~D~v~~~----~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 124 LTKMFFL----FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEEEE----SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred eeEEEEe----CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 9998753 2233211 1245566665 456777775 45555544555566654
No 195
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=48.80 E-value=10 Score=28.24 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=56.0
Q ss_pred ceeeeecCCcchhhhhcccc-cc---------ccccccccccccchhHHHHhhhhhccee-eeeecCCC-------CCCC
Q 024788 93 HKVLHVGPDTCSVVSTLLKE-EE---------TEAWGVEPYDIEDADARCKSLVHKGIVR-VADIKFPL-------PYRA 154 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e~---------tEAWGVEPydied~d~~CKsLvrKGiVR-vADIkfpL-------PYR~ 154 (262)
.+||.+|-.+-.+...|.+. .. .+.+|||+.++...+ ++ -+. .+|+.-+- +...
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~-~~-------~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLE-GA-------TFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCT-TC-------EEECSCCTTSHHHHHHHHHHSGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCC-CC-------eEEEeccCCCHHHHHHHHHhcCC
Confidence 58999999997766666665 22 678999988853211 11 112 34543211 1224
Q ss_pred CCccEEEeccccccc-----Chhh----hccccccchhh-ccCceEEEecCCcch
Q 024788 155 KSFPLVIVSDALDYL-----SPKY----LNKTLPDLARV-ASDGVLIFAGYPGQQ 199 (262)
Q Consensus 155 kSFslVivSDaLDyL-----spry----LNkTLPeLaRv-sadglViF~G~Pgqq 199 (262)
.+|++||..-++++. .+.. +.+.|-++.|+ ..+|.+++.-+.++.
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 589998874433331 1111 12455566665 567888887654443
No 196
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=47.64 E-value=29 Score=25.30 Aligned_cols=85 Identities=13% Similarity=0.112 Sum_probs=49.0
Q ss_pred EEEecccccccChhhhccccccchhhccCceEEEecC-CcchhhhHHh---hhhcCCccccccchhHHHHHHHhccccch
Q 024788 159 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGY-PGQQRAKVAE---LSKFGRPAKMRSSSWWIRYFVQTSLEENE 234 (262)
Q Consensus 159 lVivSDaLDyLspryLNkTLPeLaRvsadglViF~G~-Pgqqrakvae---lskfgrpaK~rsssWW~r~F~qt~LeEnE 234 (262)
.||+=|=+|+|++.-+|.-+.-|.+...+..+|+++. |.+....+.. .-.|..+-.--...|+.+++.+.+..-++
T Consensus 128 ~vlviDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~t~~~~~~~~~l~~r~~~i~l~~l~~~e~~~~l~~~~~~~~~~~~~ 207 (250)
T 1njg_A 128 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEP 207 (250)
T ss_dssp EEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHTTCCBCH
T ss_pred eEEEEECcccccHHHHHHHHHHHhcCCCceEEEEEeCChHhCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHhcCCCCCH
Confidence 5777788999999888776666666666778888874 3322111110 11122222222345666677676766666
Q ss_pred HHHHHHHHH
Q 024788 235 PAVKKFEQA 243 (262)
Q Consensus 235 ~a~KkFeqa 243 (262)
++.+..-+.
T Consensus 208 ~~~~~l~~~ 216 (250)
T 1njg_A 208 RALQLLARA 216 (250)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555443
No 197
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=46.41 E-value=26 Score=26.72 Aligned_cols=97 Identities=12% Similarity=0.074 Sum_probs=54.5
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhcc--eeeeeecCCCCCCCCCccEEEeccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGI--VRVADIKFPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvrKGi--VRvADIkfpLPYR~kSFslVivSDa 165 (262)
-.+||-+|-.+......|++.- +.+..|||+.+ ++-+..+++..--..- +..+|..-.+|.-.. |++|++. +
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~-~ 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD-C 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE-T
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc-C
Confidence 3589999999988777666542 57888988753 3334444432211111 344666444454456 9999864 2
Q ss_pred ccccChhhhccccccchh-hccCceEEEec
Q 024788 166 LDYLSPKYLNKTLPDLAR-VASDGVLIFAG 194 (262)
Q Consensus 166 LDyLspryLNkTLPeLaR-vsadglViF~G 194 (262)
-.--.+.+|+ ++.| +..+|++|+..
T Consensus 135 ~~~~~~~~l~----~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 DVFNGADVLE----RMNRCLAKNALLIAVN 160 (210)
T ss_dssp TTSCHHHHHH----HHGGGEEEEEEEEEES
T ss_pred ChhhhHHHHH----HHHHhcCCCeEEEEEC
Confidence 1111133343 4433 45678888743
No 198
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=42.15 E-value=12 Score=30.01 Aligned_cols=112 Identities=15% Similarity=0.129 Sum_probs=62.5
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc-----eeee
Q 024788 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVA 144 (262)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKGi-----VRvA 144 (262)
..+..+.+-.|-+..+ -++||-||..+......|++. ++.+..+||..+ ++-+..+++. .|+ ++..
T Consensus 55 ~~~~~~~l~~l~~~~~--~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~g~~~~i~~~~g 129 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVN--AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRK---AGVEHKINFIES 129 (237)
T ss_dssp CHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH---TTCGGGEEEEES
T ss_pred CHHHHHHHHHHHHhhC--CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH---cCCCCcEEEEEc
Confidence 3444455555444433 358999999998877666654 357888888653 2333333332 233 3445
Q ss_pred eecCCCCC------CCCCccEEEecccccccChhhhccccccchhhccCceEEEec
Q 024788 145 DIKFPLPY------RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (262)
Q Consensus 145 DIkfpLPY------R~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (262)
|..--+|- ...+|++|++ |+-.-..+.||+..++ .+..+|++++..
T Consensus 130 da~~~l~~l~~~~~~~~~fD~I~~-d~~~~~~~~~l~~~~~---~L~pGG~lv~d~ 181 (237)
T 3c3y_A 130 DAMLALDNLLQGQESEGSYDFGFV-DADKPNYIKYHERLMK---LVKVGGIVAYDN 181 (237)
T ss_dssp CHHHHHHHHHHSTTCTTCEEEEEE-CSCGGGHHHHHHHHHH---HEEEEEEEEEEC
T ss_pred CHHHHHHHHHhccCCCCCcCEEEE-CCchHHHHHHHHHHHH---hcCCCeEEEEec
Confidence 54322331 1468999875 4432223455555442 345677877743
No 199
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=41.62 E-value=18 Score=28.95 Aligned_cols=117 Identities=14% Similarity=0.128 Sum_probs=62.8
Q ss_pred hHHHHhhhhHHHHHhccc-cceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhh-cce--eeee
Q 024788 74 TSEIQRAIPILKKAYGDS-MHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHK-GIV--RVAD 145 (262)
Q Consensus 74 t~eV~~aiP~LkkaYGds-M~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrK-GiV--RvAD 145 (262)
..+..+.+-.|-+..+.. -.+||-+|..+-..--.|.+. .+.+..|||..+ ++-+..+++..--. .-| +.+|
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 355555566666555421 128999999887766656553 357888888754 34444444432111 122 3444
Q ss_pred ecCCCC-CCCCCccEEEecccccccChhhhccccccchhhccCceEEEec
Q 024788 146 IKFPLP-YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (262)
Q Consensus 146 IkfpLP-YR~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (262)
..-.|| ....+|++|++ |+-.---++|++..++ .+...|++++..
T Consensus 118 a~~~l~~~~~~~fD~V~~-d~~~~~~~~~l~~~~~---~LkpGG~lv~dn 163 (221)
T 3dr5_A 118 PLDVMSRLANDSYQLVFG-QVSPMDLKALVDAAWP---LLRRGGALVLAD 163 (221)
T ss_dssp HHHHGGGSCTTCEEEEEE-CCCTTTHHHHHHHHHH---HEEEEEEEEETT
T ss_pred HHHHHHHhcCCCcCeEEE-cCcHHHHHHHHHHHHH---HcCCCcEEEEeC
Confidence 422233 22678999976 4321112345444432 345677777743
No 200
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=41.33 E-value=29 Score=27.46 Aligned_cols=114 Identities=16% Similarity=0.177 Sum_probs=59.1
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhh--hhcceeeeeec
Q 024788 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIK 147 (262)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIk 147 (262)
..+..+.+-.|-+... -.+||-||-.+......|++. ++.+..|||+.+ ++-+..+++..- .+=-+..+|..
T Consensus 57 ~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 57 SPEQAQFLGLLISLTG--AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp CHHHHHHHHHHHHHHT--CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CHHHHHHHHHHHHhcC--CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3444444444433332 358999999988877766654 256788888653 333333332210 11123445542
Q ss_pred C---CCCCCC--CCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 024788 148 F---PLPYRA--KSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (262)
Q Consensus 148 f---pLPYR~--kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (262)
- .+|... .+|++|++ |+-.---+.||+..+ ..+..+|++|+.
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~---~~LkpgG~lv~~ 181 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFI-DADKRNYPRYYEIGL---NLLRRGGLMVID 181 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEE-CSCGGGHHHHHHHHH---HTEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCCcCEEEE-CCCHHHHHHHHHHHH---HHcCCCeEEEEe
Confidence 1 233333 78999875 432111134444433 234567777774
No 201
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=40.36 E-value=22 Score=32.57 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=54.3
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---e--eeeeec-CCCCCCCCCccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---V--RVADIK-FPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi---V--RvADIk-fpLPYR~kSFslVivSDa 165 (262)
.+||-||-.|-.+...|.+....+..|||.-++ + ..++..++ .|+ | ..+|+. +++| .+|++||..-.
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~--l-~~A~~~~~~~gl~~~v~~~~~d~~~~~~~---~~fD~Ivs~~~ 233 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTM--A-QHAEVLVKSNNLTDRIVVIPGKVEEVSLP---EQVDIIISEPM 233 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTCSEEEEEECHHH--H-HHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEEECCCC
T ss_pred CEEEEecCcccHHHHHHHHcCCCEEEEEEcHHH--H-HHHHHHHHHcCCCCcEEEEECchhhCccC---CCeEEEEEeCc
Confidence 589999999987776666655668899987652 2 22333222 233 3 345553 2444 57998875434
Q ss_pred ccccChhhhccccccchhh-ccCceEEE
Q 024788 166 LDYLSPKYLNKTLPDLARV-ASDGVLIF 192 (262)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF 192 (262)
+.++...-+-.++-++.|+ ..+|++++
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 3445433333344444554 45677764
No 202
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=39.65 E-value=11 Score=29.70 Aligned_cols=98 Identities=13% Similarity=0.184 Sum_probs=53.9
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhc--ceeeeeecCCCCC-------------
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPY------------- 152 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIkfpLPY------------- 152 (262)
-.+||-+|-.+......|++.- ..+..|||+.+ ++-+..+++..--.. -+..+|+.-.+|.
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 3589999999887777776653 56888988653 333444433211111 2344555333331
Q ss_pred -C-C-CCccEEEecccccccChhhhccccccchhh-ccCceEEEec
Q 024788 153 -R-A-KSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 194 (262)
Q Consensus 153 -R-~-kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G 194 (262)
- . .+|++|++.-..+.+ +.+ +.++.|+ ..+|++++.-
T Consensus 141 f~~~~~~fD~I~~~~~~~~~-~~~----l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADKENY-PNY----YPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCCSTTCEEEEEECSCGGGH-HHH----HHHHHHHEEEEEEEEEEC
T ss_pred ccCCCCCcCEEEEeCCHHHH-HHH----HHHHHHHcCCCeEEEEEc
Confidence 1 1 689999875332211 233 4444443 4577777753
No 203
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=39.37 E-value=34 Score=26.17 Aligned_cols=114 Identities=15% Similarity=0.135 Sum_probs=62.3
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhc--ceeeeeec
Q 024788 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIK 147 (262)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIk 147 (262)
+.+..+.+-.|-+... -.+||-+|..|-.....|.+.- ..+..|||..+ ++-+..+++..--.. -+...|+.
T Consensus 43 ~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQG--ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL 120 (223)
T ss_dssp CHHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred CHHHHHHHHHHHHhhC--CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 4444555544433332 3689999999988777766652 56888888654 444555554321111 23456653
Q ss_pred CCCCC---CC-CCccEEEecccccccChhhhccccccchh-hccCceEEEec
Q 024788 148 FPLPY---RA-KSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG 194 (262)
Q Consensus 148 fpLPY---R~-kSFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G 194 (262)
-.+|- .. .+|++|++ |+-.--.+.||+ ++.| +..+|++++..
T Consensus 121 ~~~~~~~~~~~~~fD~v~~-d~~~~~~~~~l~----~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 121 DSLQQIENEKYEPFDFIFI-DADKQNNPAYFE----WALKLSRPGTVIIGDN 167 (223)
T ss_dssp HHHHHHHHTTCCCCSEEEE-CSCGGGHHHHHH----HHHHTCCTTCEEEEES
T ss_pred HHHHHHHhcCCCCcCEEEE-cCCcHHHHHHHH----HHHHhcCCCcEEEEeC
Confidence 32332 11 57999875 332212234444 4333 45677777754
No 204
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=39.20 E-value=13 Score=30.18 Aligned_cols=119 Identities=13% Similarity=0.174 Sum_probs=67.4
Q ss_pred chHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeeeee
Q 024788 73 CTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADI 146 (262)
Q Consensus 73 Ct~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADI 146 (262)
...+..+.+-.|-+..+ -++||-+|-.+-...-.|.+. ++.+..|||..+ ++-+..+++..=-.. -+..+|.
T Consensus 44 i~~~~~~~l~~l~~~~~--~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 44 VAPEQAQFMQMLIRLTR--AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp CCHHHHHHHHHHHHHHT--CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred cCHHHHHHHHHHHhhcC--cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 44454455444444332 369999999887766655552 367889998654 566777766432112 2445666
Q ss_pred cCCCCCC-----CCCccEEEecccccccChhhhccccccchh-hccCceEEEec--CCcc
Q 024788 147 KFPLPYR-----AKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG--YPGQ 198 (262)
Q Consensus 147 kfpLPYR-----~kSFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G--~Pgq 198 (262)
.-.+|.- ..+|++|++. +-.--.++||. ++.| +...|++++.- ++|.
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d-~~~~~~~~~l~----~~~~~LkpGG~lv~d~~~~~g~ 176 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFID-ADKTNYLNYYE----LALKLVTPKGLIAIDNIFWDGK 176 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEE-SCGGGHHHHHH----HHHHHEEEEEEEEEECSSSSSC
T ss_pred HHHHHHHhhccCCCCEeEEEEc-CChHHhHHHHH----HHHHhcCCCeEEEEECCccCCc
Confidence 4444432 4789998763 32111123444 3334 45678888733 5553
No 205
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=38.29 E-value=25 Score=29.67 Aligned_cols=67 Identities=21% Similarity=0.246 Sum_probs=38.8
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeee-cCCCCCCCCCccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADI-KFPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADI-kfpLPYR~kSFslVivSDa 165 (262)
.+||-+|+.+-.....|++. ..+..|||..+ ++.+..+++..- .+=-+..+|+ +++++ +|++||. |.
T Consensus 44 ~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~----~~D~Vv~-n~ 114 (299)
T 2h1r_A 44 DIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP----KFDVCTA-NI 114 (299)
T ss_dssp CEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC----CCSEEEE-EC
T ss_pred CEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc----cCCEEEE-cC
Confidence 58999999999988887765 56788888643 334444443210 1111344565 44443 7987765 43
No 206
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=37.88 E-value=47 Score=24.91 Aligned_cols=6 Identities=17% Similarity=0.551 Sum_probs=3.2
Q ss_pred eEEEec
Q 024788 189 VLIFAG 194 (262)
Q Consensus 189 lViF~G 194 (262)
+||++|
T Consensus 35 ~vi~~G 40 (228)
T 1uf3_A 35 AIALIG 40 (228)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 455555
No 207
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=34.34 E-value=23 Score=30.26 Aligned_cols=41 Identities=17% Similarity=0.331 Sum_probs=33.8
Q ss_pred CCCccEEEecccccccChhhhccccccchhhccCceEEEec
Q 024788 154 AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (262)
Q Consensus 154 ~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (262)
..+|++|+..+.|-|++|.-..+.+..+.++=..|=++|.|
T Consensus 211 ~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 46799999999999999998899999999875555445555
No 208
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=33.79 E-value=33 Score=29.66 Aligned_cols=81 Identities=19% Similarity=0.224 Sum_probs=42.2
Q ss_pred cccceeeeec----CCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccc
Q 024788 90 DSMHKVLHVG----PDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 90 dsM~kVLHVG----PdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDa 165 (262)
+.|++||-|| |+.+..+..+|++...+. +.-+.+++ .. -+=--+.|++||.+|.
T Consensus 2 ~~m~~vLiV~g~~~~~~a~~l~~aL~~~g~~V---~~i~~~~~------------------~~-~~~~L~~yDvIIl~d~ 59 (259)
T 3rht_A 2 NAMTRVLYCGDTSLETAAGYLAGLMTSWQWEF---DYIPSHVG------------------LD-VGELLAKQDLVILSDY 59 (259)
T ss_dssp ----CEEEEESSCTTTTHHHHHHHHHHTTCCC---EEECTTSC------------------BC-SSHHHHTCSEEEEESC
T ss_pred CCCceEEEECCCCchhHHHHHHHHHHhCCceE---EEeccccc------------------cc-ChhHHhcCCEEEEcCC
Confidence 4699999997 445566666665443221 11111111 00 0011258999999985
Q ss_pred cc-ccChhhhccccccchhhccCceEEEec
Q 024788 166 LD-YLSPKYLNKTLPDLARVASDGVLIFAG 194 (262)
Q Consensus 166 LD-yLspryLNkTLPeLaRvsadglViF~G 194 (262)
=. .|+|.++ +.|-+.++ .--|+|++.|
T Consensus 60 ~~~~l~~~~~-~~L~~yV~-~GGgLi~~gG 87 (259)
T 3rht_A 60 PAERMTAQAI-DQLVTMVK-AGCGLVMLGG 87 (259)
T ss_dssp CGGGBCHHHH-HHHHHHHH-TTCEEEEECS
T ss_pred ccccCCHHHH-HHHHHHHH-hCCeEEEecC
Confidence 42 4666655 34666666 4566666666
No 209
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=33.42 E-value=13 Score=29.79 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=42.1
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCC-CCccEEEecc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA-KSFPLVIVSD 164 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~-kSFslVivSD 164 (262)
-.+||-+|+.+..+...|.+.. .+..|||.-+ ++-+..+++ ...+--+..+|+. .+|+.. .+| +|++|
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~-~~~~~~~~~f--~vv~n 100 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDIL-QFQFPNKQRY--KIVGN 100 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCT-TTTCCCSSEE--EEEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChh-hcCcccCCCc--EEEEe
Confidence 3589999999998877777664 7889998653 344555554 1112234456763 234432 577 56666
No 210
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=31.28 E-value=43 Score=30.25 Aligned_cols=138 Identities=14% Similarity=0.080 Sum_probs=76.1
Q ss_pred hhHHHHHhc------cccceeeeecCCcchhhhhcccc-ccccccccc--cccccchhHHHHhhhhhcceeeeeecCCCC
Q 024788 81 IPILKKAYG------DSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVE--PYDIEDADARCKSLVHKGIVRVADIKFPLP 151 (262)
Q Consensus 81 iP~LkkaYG------dsM~kVLHVGPdtC~VVs~LLkE-e~tEAWGVE--Pydied~d~~CKsLvrKGiVRvADIkfpLP 151 (262)
+|.|..-|. ..-.+||-+|=.+=-+---+..+ ..++.|+++ +=-+|=+..|+..+=-.+-+++.|.--+.|
T Consensus 116 Lp~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p 195 (281)
T 3lcv_B 116 LPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRL 195 (281)
T ss_dssp GGGHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCC
T ss_pred hHhHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCC
Confidence 688888887 44668888875554443344444 566777752 112233445554433335567777655444
Q ss_pred CCCCCccEEEecccccccChhhhccccccchhhccCceEEEecCCcchhhhHHhhhhcCCcccc--ccchhHHHHHHHhc
Q 024788 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFGRPAKM--RSSSWWIRYFVQTS 229 (262)
Q Consensus 152 YR~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G~PgqqrakvaelskfgrpaK~--rsssWW~r~F~qt~ 229 (262)
+-.|++|++.+++.+|...-=-.-+-=+.++.++|+|| .+|.+- =-||..-| .-+.||-+.....|
T Consensus 196 --~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvV--Sfp~ks--------l~Grs~gm~~~Y~~~~e~~~~~~g 263 (281)
T 3lcv_B 196 --DEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVV--TFPTKS--------LGQRSKGMFQNYSQSFESQARERS 263 (281)
T ss_dssp --CSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEE--EEECC---------------CHHHHHHHHHHHHHHHHT
T ss_pred --CCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEE--eccchh--------hcCCCcchhhHHHHHHHHHHHhcC
Confidence 66799999888887775442111112346778888877 555422 12333333 24567776665444
Q ss_pred c
Q 024788 230 L 230 (262)
Q Consensus 230 L 230 (262)
.
T Consensus 264 ~ 264 (281)
T 3lcv_B 264 C 264 (281)
T ss_dssp C
T ss_pred C
Confidence 4
No 211
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=30.95 E-value=31 Score=30.42 Aligned_cols=70 Identities=14% Similarity=0.240 Sum_probs=41.8
Q ss_pred ceeeeecCCcchhhhhcccccc-cccccccccc--ccchhHHHHhhhhhcceeeeeecCCCC-CCCCCccEEEe
Q 024788 93 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLP-YRAKSFPLVIV 162 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe~-tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLP-YR~kSFslViv 162 (262)
.+||-+|-.+-.....|.+... .+..|+|..+ ++.+..+++.+=-.--+..+|..-..+ +...+|++|++
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEE
Confidence 4899998887776666655432 5777777544 555666655431122344566643322 34468999886
No 212
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=30.86 E-value=77 Score=26.75 Aligned_cols=42 Identities=17% Similarity=0.229 Sum_probs=30.0
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHh
Q 024788 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKS 134 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKs 134 (262)
.+||-+|-.+-+.++.|-+- .+....|||.-+ ++++-.+++.
T Consensus 79 ~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~ 124 (233)
T 4df3_A 79 DRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD 124 (233)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT
T ss_pred CEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh
Confidence 48999999888888877653 567788887543 4566666543
No 213
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=30.05 E-value=41 Score=29.18 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=54.3
Q ss_pred ceeeeecC--------CcchhhhhccccccccccccccccccchhHHHHhhhhhcce-eeeeecCCCCCCCCCccEEEec
Q 024788 93 HKVLHVGP--------DTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIV-RVADIKFPLPYRAKSFPLVIVS 163 (262)
Q Consensus 93 ~kVLHVGP--------dtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiV-RvADIkfpLPYR~kSFslVivS 163 (262)
.+||++|- .+ .+.++++.+ +.+..|||..+. +..=-+ ..+|+.- +|+. .+|++|+ |
T Consensus 65 ~~VLDLGcGsg~~~GpGs-~~~a~~~~~-~~~V~gvDis~~----------v~~v~~~i~gD~~~-~~~~-~~fD~Vv-s 129 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGT-AVLRQWLPT-GTLLVDSDLNDF----------VSDADSTLIGDCAT-VHTA-NKWDLII-S 129 (290)
T ss_dssp CEEEEESCCCTTSBCHHH-HHHHHHSCT-TCEEEEEESSCC----------BCSSSEEEESCGGG-CCCS-SCEEEEE-E
T ss_pred CEEEEeCCCCCCCCCcHH-HHHHHHcCC-CCEEEEEECCCC----------CCCCEEEEECcccc-CCcc-CcccEEE-E
Confidence 47999987 44 555555542 356788877665 111113 4477742 3332 6899988 5
Q ss_pred ccc---------cccChhh-hccccccchhhc-cCceEEEecCCc-chhhhHHhhhhcC
Q 024788 164 DAL---------DYLSPKY-LNKTLPDLARVA-SDGVLIFAGYPG-QQRAKVAELSKFG 210 (262)
Q Consensus 164 DaL---------DyLspry-LNkTLPeLaRvs-adglViF~G~Pg-qqrakvaelskfg 210 (262)
|.. |+....+ +...|.+..|+= ..|.++|.-+-+ +...-...+.++|
T Consensus 130 n~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~G 188 (290)
T 2xyq_A 130 DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFS 188 (290)
T ss_dssp CCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEE
T ss_pred cCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcC
Confidence 532 2222111 124556666654 567777755332 3223334455553
No 214
>2kwt_A Protease NS2-3; NS2 domain, membrane protein, viral prote; NMR {Hepatitis c virus}
Probab=30.04 E-value=18 Score=23.85 Aligned_cols=10 Identities=40% Similarity=1.554 Sum_probs=8.4
Q ss_pred chhHHHHHHH
Q 024788 218 SSWWIRYFVQ 227 (262)
Q Consensus 218 ssWW~r~F~q 227 (262)
.-||.+||+.
T Consensus 7 ~lWWlqYfi~ 16 (33)
T 2kwt_A 7 LIWWLQYFIT 16 (33)
T ss_dssp THHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4699999985
No 215
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=29.47 E-value=42 Score=27.97 Aligned_cols=66 Identities=26% Similarity=0.319 Sum_probs=40.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeec-CCCCCCCCCccEEEe
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIK-FPLPYRAKSFPLVIV 162 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIk-fpLPYR~kSFslViv 162 (262)
=.+||-|||.+......|++. ..+..|||+-+ ++-+..+++..- .+=-+..+|+- +++| +|++|+.
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~----~fD~vv~ 99 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP----FFDTCVA 99 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC----CCSEEEE
T ss_pred CCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch----hhcEEEE
Confidence 357999999999988888765 45788888643 223333332210 11224457763 4555 6887665
No 216
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=29.35 E-value=30 Score=23.77 Aligned_cols=16 Identities=44% Similarity=0.627 Sum_probs=12.5
Q ss_pred CCCCchhhHHHHHHHH
Q 024788 29 RSSPLLSVGLVLVGAF 44 (262)
Q Consensus 29 rsspllsi~lv~vgai 44 (262)
++||..+|+..++|.+
T Consensus 7 ~~~~~~~Ia~~vVGvl 22 (44)
T 2jwa_A 7 RASPLTSIISAVVGIL 22 (44)
T ss_dssp CCCSHHHHHHHHHHHH
T ss_pred CCCcccchHHHHHHHH
Confidence 4789988988888833
No 217
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=28.77 E-value=16 Score=31.82 Aligned_cols=121 Identities=16% Similarity=0.267 Sum_probs=68.3
Q ss_pred cceeeeecCCc---chhhhhcccc---ccccccccccccc------c-------------------chhHHHHhhhhhcc
Q 024788 92 MHKVLHVGPDT---CSVVSTLLKE---EETEAWGVEPYDI------E-------------------DADARCKSLVHKGI 140 (262)
Q Consensus 92 M~kVLHVGPdt---C~VVs~LLkE---e~tEAWGVEPydi------e-------------------d~d~~CKsLvrKGi 140 (262)
-.+||=+|--+ +...+..|++ .+.+.|+++.++- + ..+..-+.+-+.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 45788888754 3345556654 3677888876531 0 01112233344454
Q ss_pred ------eeeeeecCCCCCC-CCCccEEEeccccccc-ChhhhccccccchhhccCceEEEecC---CcchhhhHHhhhhc
Q 024788 141 ------VRVADIKFPLPYR-AKSFPLVIVSDALDYL-SPKYLNKTLPDLARVASDGVLIFAGY---PGQQRAKVAELSKF 209 (262)
Q Consensus 141 ------VRvADIkfpLPYR-~kSFslVivSDaLDyL-spryLNkTLPeLaRvsadglViF~G~---Pgqqrakvaelskf 209 (262)
++..|..=-||-- ..+|++|.+ |+=-|- ...||+.-+| |++..|+|||=-+ ||+.+|=-.=+.+.
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfI-DaD~y~~~~~~Le~~~p---~L~pGGiIv~DD~~~~~G~~~Av~Ef~~~~ 262 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRM-DGDLYESTWDTLTNLYP---KVSVGGYVIVDDYMMCPPCKDAVDEYRAKF 262 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEE-CCCSHHHHHHHHHHHGG---GEEEEEEEEESSCTTCHHHHHHHHHHHHHT
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEE-cCCccccHHHHHHHHHh---hcCCCEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence 3333443334422 357888776 653344 3578888777 6788999999653 77655443334455
Q ss_pred CCccccc
Q 024788 210 GRPAKMR 216 (262)
Q Consensus 210 grpaK~r 216 (262)
|..+.+.
T Consensus 263 ~i~~~i~ 269 (282)
T 2wk1_A 263 DIADELI 269 (282)
T ss_dssp TCCSCCE
T ss_pred CCceEEE
Confidence 5544443
No 218
>3izc_W 60S ribosomal protein RPL22 (L22E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_W 3u5e_U 3u5i_U 4b6a_U
Probab=28.47 E-value=16 Score=29.74 Aligned_cols=23 Identities=43% Similarity=0.668 Sum_probs=19.2
Q ss_pred ccccChhhh-ccccccchhhccCc
Q 024788 166 LDYLSPKYL-NKTLPDLARVASDG 188 (262)
Q Consensus 166 LDyLspryL-NkTLPeLaRvsadg 188 (262)
|.||+.||| .+.|-|.-||=|.+
T Consensus 76 LKYLTKKyLKK~~LRDwlRVVa~~ 99 (121)
T 3izc_W 76 LKYLTKKYLKKNQLRDWIRFVSTK 99 (121)
T ss_dssp HHHHHHHHHTTSSSCCCCCCSSSC
T ss_pred HHHHHHHHhhhccccceEEEEecC
Confidence 899999999 55899999987654
No 219
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=28.32 E-value=66 Score=28.48 Aligned_cols=96 Identities=18% Similarity=0.265 Sum_probs=55.2
Q ss_pred ceeeeecCCcchhhhhcccc-ccccccccccc--cccchhHHHHhhhhhcc----eeeeeecCCCCCCCCCccEEEeccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPY--DIEDADARCKSLVHKGI----VRVADIKFPLPYRAKSFPLVIVSDA 165 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPy--died~d~~CKsLvrKGi----VRvADIkfpLPYR~kSFslVivSDa 165 (262)
.+||-||=.+-..-+-++.. -+.+.-|||.- -++-|..+.+. .|+ +..+|.. .+| ..+|++|+++ +
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~---~gl~~v~~v~gDa~-~l~--d~~FDvV~~~-a 196 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEG---LGVDGVNVITGDET-VID--GLEFDVLMVA-A 196 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHH---HTCCSEEEEESCGG-GGG--GCCCSEEEEC-T
T ss_pred CEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHh---cCCCCeEEEECchh-hCC--CCCcCEEEEC-C
Confidence 58999985543322222322 35667777643 23334444332 244 3345553 356 5789999975 3
Q ss_pred ccccChhhhccccccchhh-ccCceEEEecCCcch
Q 024788 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 199 (262)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G~Pgqq 199 (262)
+ . .-..+.+.++.|+ ...|.+++...+|..
T Consensus 197 ~---~-~d~~~~l~el~r~LkPGG~Lvv~~~~~~r 227 (298)
T 3fpf_A 197 L---A-EPKRRVFRNIHRYVDTETRIIYRTYTGMR 227 (298)
T ss_dssp T---C-SCHHHHHHHHHHHCCTTCEEEEEECCGGG
T ss_pred C---c-cCHHHHHHHHHHHcCCCcEEEEEcCcchh
Confidence 3 2 2334688899986 456788777766653
No 220
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=27.43 E-value=11 Score=33.50 Aligned_cols=98 Identities=14% Similarity=0.232 Sum_probs=54.9
Q ss_pred eeeeecCCcchhhhhcccc-ccccccccccccccchhHHHHhhhh-----hcceeeeeec-CCCCCCCCCccEEEecccc
Q 024788 94 KVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVH-----KGIVRVADIK-FPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 94 kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPydied~d~~CKsLvr-----KGiVRvADIk-fpLPYR~kSFslVivSDaL 166 (262)
+||++|-.++.+...|++. .+.+.-+||.-. ++-..|+.-.. +--|.++|.. |.-.+...+|++||+ |+.
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp--~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~-D~~ 168 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDA--ELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIR-DVF 168 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCH--HHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEE-CCS
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCH--HHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEE-CCC
Confidence 8999999999999999883 455666665422 12333333221 2235567753 322344678998875 554
Q ss_pred cccC-hhhh--ccccccch-hhccCceEEEec
Q 024788 167 DYLS-PKYL--NKTLPDLA-RVASDGVLIFAG 194 (262)
Q Consensus 167 DyLs-pryL--NkTLPeLa-RvsadglViF~G 194 (262)
+... |..| -..+-++. ++..+|++++.-
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 4321 2222 11122333 456788776654
No 221
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=27.01 E-value=21 Score=34.04 Aligned_cols=50 Identities=24% Similarity=0.349 Sum_probs=38.4
Q ss_pred ceeeeeec--CC---CCCCCCCccEEEecccccccChhhhccccccchhhccCceEEEec
Q 024788 140 IVRVADIK--FP---LPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (262)
Q Consensus 140 iVRvADIk--fp---LPYR~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (262)
-+|||.+. .+ +||=---| .+.++|||-.-|-.|+-|.|-.-+|||||--.
T Consensus 250 A~Rva~~~~~~~lPV~~Y~r~~Y-----~~~~~fLS~~DL~~TigesaalGa~GiViWGs 304 (424)
T 2pe4_A 250 AFRVAVAAGDPNLPVLPYVQIFY-----DTTNHFLPLDELEHSLGESAAQGAAGVVLWVS 304 (424)
T ss_dssp HHHHHHHTTCTTCCBCCEECSBC-----BTSCCBCCHHHHHTTHHHHHHTTCSEEEEECC
T ss_pred HHHHHhccCCCCCceEEEEeeEe-----cCccccccHHHHHHHHHHHHHcCCCeEEEecc
Confidence 36888763 23 44432222 68889999999999999999999999999865
No 222
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=26.52 E-value=76 Score=22.97 Aligned_cols=84 Identities=10% Similarity=0.043 Sum_probs=44.9
Q ss_pred EEEecccccccChhhhccccccchhhccCceEEEecCCcc-hhhhHHh---hhhcCCccccccchhHHHHHHHhccccch
Q 024788 159 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPGQ-QRAKVAE---LSKFGRPAKMRSSSWWIRYFVQTSLEENE 234 (262)
Q Consensus 159 lVivSDaLDyLspryLNkTLPeLaRvsadglViF~G~Pgq-qrakvae---lskfgrpaK~rsssWW~r~F~qt~LeEnE 234 (262)
.||+=|=+|.+++.-+|.-+.-+.+...+..+|+++...+ ....+.. .-.|..+-.--...|+.+++.+.++.-.+
T Consensus 104 ~vliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~ 183 (226)
T 2chg_A 104 KIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITE 183 (226)
T ss_dssp EEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCH
T ss_pred eEEEEeChhhcCHHHHHHHHHHHHhcCCCCeEEEEeCChhhcCHHHHHhCceeecCCCCHHHHHHHHHHHHHHcCCCCCH
Confidence 4566677899999877665555555566777888774432 2111110 11122222222235666666666766555
Q ss_pred HHHHHHHH
Q 024788 235 PAVKKFEQ 242 (262)
Q Consensus 235 ~a~KkFeq 242 (262)
++.+...+
T Consensus 184 ~~~~~l~~ 191 (226)
T 2chg_A 184 DGLEALIY 191 (226)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 223
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=26.34 E-value=52 Score=25.83 Aligned_cols=71 Identities=10% Similarity=-0.010 Sum_probs=42.5
Q ss_pred ceeeeecCCcchhhhhccccc-cccccccccc--cccchhHHHHhhhhhc--ceeeeeecC----CCCCC-CCCccEEEe
Q 024788 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPY--DIEDADARCKSLVHKG--IVRVADIKF----PLPYR-AKSFPLVIV 162 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPy--died~d~~CKsLvrKG--iVRvADIkf----pLPYR-~kSFslViv 162 (262)
.+||-+|-.|..+...|++.- ..+..|||.. -++-+..+++..--.. -+..+|+.- ++|-. ..+|++||.
T Consensus 67 ~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~ 146 (254)
T 2h00_A 67 RRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMC 146 (254)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEE
T ss_pred CEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEE
Confidence 489999999988777776653 4678888754 3444555554331111 234456431 34432 268999875
Q ss_pred c
Q 024788 163 S 163 (262)
Q Consensus 163 S 163 (262)
.
T Consensus 147 n 147 (254)
T 2h00_A 147 N 147 (254)
T ss_dssp C
T ss_pred C
Confidence 4
No 224
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=26.14 E-value=64 Score=27.28 Aligned_cols=117 Identities=10% Similarity=0.095 Sum_probs=63.0
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEec----
Q 024788 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVS---- 163 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivS---- 163 (262)
.+||-+|-.+-..-..|.+. ...+..|+|..+ ++.+..+++.+--.. .+..+|+.-..+ -..+|++|++-
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-LNVEFDKILLDAPCT 198 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-GCCCEEEEEEECCTT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-ccccCCEEEEeCCCC
Confidence 47999988887766666653 346778887653 455666655431111 234456543222 34579998861
Q ss_pred ---------ccccccChhhhc-------cccccchhh-ccCceEEEec---CCcchhhhHHhh-hhcC
Q 024788 164 ---------DALDYLSPKYLN-------KTLPDLARV-ASDGVLIFAG---YPGQQRAKVAEL-SKFG 210 (262)
Q Consensus 164 ---------DaLDyLspryLN-------kTLPeLaRv-sadglViF~G---~Pgqqrakvael-skfg 210 (262)
|+....+|..+. +.|-++.|+ ..+|.++++- .|.+...-++++ .++|
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~ 266 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFD 266 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCC
Confidence 222223443332 344555554 5678888843 565554555543 3443
No 225
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=25.73 E-value=41 Score=27.34 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=44.7
Q ss_pred cceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhc-----ceeeeeecCCC------CCCCCCc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKG-----IVRVADIKFPL------PYRAKSF 157 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKG-----iVRvADIkfpL------PYR~kSF 157 (262)
-.+||-+|-.|-.+.-.|.+.. ..+..|||.-+ ++-+..|++.+-..| -+..+|+.-.+ ++...+|
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 3589999999887766665553 46788887643 333444444311122 34567876553 3567899
Q ss_pred cEEEec
Q 024788 158 PLVIVS 163 (262)
Q Consensus 158 slVivS 163 (262)
++||..
T Consensus 117 D~Vv~n 122 (260)
T 2ozv_A 117 HHVIMN 122 (260)
T ss_dssp EEEEEC
T ss_pred CEEEEC
Confidence 998864
No 226
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=25.43 E-value=67 Score=28.63 Aligned_cols=67 Identities=13% Similarity=0.173 Sum_probs=39.9
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc--e--eeeeecCCCC-CCCCCccEEEe
Q 024788 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI--V--RVADIKFPLP-YRAKSFPLVIV 162 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKGi--V--RvADIkfpLP-YR~kSFslViv 162 (262)
.+||-+|-.+-..-..|.+. +..+..|+|..+ ++.+..+++.+ |+ | ..+|..-..+ +...+|++|++
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~---g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM---GIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT---TCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc---CCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 47999988777666555552 336777777654 44555555432 43 3 3356533222 44578999885
No 227
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=25.40 E-value=61 Score=28.48 Aligned_cols=177 Identities=16% Similarity=0.207 Sum_probs=101.9
Q ss_pred hhccCCCccCccccccccccCCccc--------hHHHHhhhhHHHHHhccccceeeeecCCc--chhhhhcccc--cccc
Q 024788 49 YAFSGSGIFGGDKAAVSRIEGDFSC--------TSEIQRAIPILKKAYGDSMHKVLHVGPDT--CSVVSTLLKE--EETE 116 (262)
Q Consensus 49 Y~ysgsg~~~~~~~~vs~~eg~~sC--------t~eV~~aiP~LkkaYGdsM~kVLHVGPdt--C~VVs~LLkE--e~tE 116 (262)
|+-+|.--|--|+++-.++..-+-- ..=+.||+-+|...- .++.||-+|=.+ -.-+..++++ .+.+
T Consensus 30 ~~LgGk~n~~~Dr~~~~~~~~~~P~~~~~a~~nr~fl~rav~~l~~~~--g~~q~LDLGcG~pT~~~~~~la~~~~P~ar 107 (277)
T 3giw_A 30 YIIGGKDYYPADKEAGDAMSREWPALPVHMRANRDWMNRAVAHLAKEA--GIRQFLDIGTGIPTSPNLHEIAQSVAPESR 107 (277)
T ss_dssp HHTTCSCCCHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHTS--CCCEEEEESCCSCCSSCHHHHHHHHCTTCE
T ss_pred eecCCccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhcccc--CCCEEEEeCCCCCcccHHHHHHHHHCCCCE
Confidence 6667776676667655444321111 122344555554322 468999997553 3333444433 2345
Q ss_pred ccccccccccchhHHHHhhhhh-c----ceeeeeecCC---C--CCCCCCcc-----EEEecccccccChhh-hcccccc
Q 024788 117 AWGVEPYDIEDADARCKSLVHK-G----IVRVADIKFP---L--PYRAKSFP-----LVIVSDALDYLSPKY-LNKTLPD 180 (262)
Q Consensus 117 AWGVEPydied~d~~CKsLvrK-G----iVRvADIkfp---L--PYR~kSFs-----lVivSDaLDyLspry-LNkTLPe 180 (262)
.-||+.-. ..=..++.+... + -+..+|+.-+ | |-...+|. .|+..-+|-||.+.. ....|.+
T Consensus 108 Vv~VD~sp--~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~ 185 (277)
T 3giw_A 108 VVYVDNDP--IVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRR 185 (277)
T ss_dssp EEEEECCH--HHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHH
T ss_pred EEEEeCCh--HHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHH
Confidence 55554322 133455665543 1 2456788654 1 11123454 477777799998765 4678889
Q ss_pred chhhcc-CceEEEec-----CCcchhhhHHhhhhcCCccccccchhHHHHHHHhccc
Q 024788 181 LARVAS-DGVLIFAG-----YPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLE 231 (262)
Q Consensus 181 LaRvsa-dglViF~G-----~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~Le 231 (262)
|.++-+ .|.++++- .|...++-......-|-|..+|+..=+.+||- |||
T Consensus 186 l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~--Gle 240 (277)
T 3giw_A 186 LLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFE--GLE 240 (277)
T ss_dssp HHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTT--TSE
T ss_pred HHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhC--CCc
Confidence 988765 56666652 23333444445567788999999999999994 776
No 228
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=24.84 E-value=24 Score=31.16 Aligned_cols=45 Identities=27% Similarity=0.396 Sum_probs=31.1
Q ss_pred hhhhccccccchhhccCc-eEEEecCCcchhhhHHhhhhcCCccccccchh
Q 024788 171 PKYLNKTLPDLARVASDG-VLIFAGYPGQQRAKVAELSKFGRPAKMRSSSW 220 (262)
Q Consensus 171 pryLNkTLPeLaRvsadg-lViF~G~PgqqrakvaelskfgrpaK~rsssW 220 (262)
.--+|+|||+|-+.+.++ .||+.| |+-+=.- +|-++| +.+=.+++
T Consensus 195 stlvN~Tl~~lL~~~~~a~~vvl~G-PStp~~P--~lf~~G--v~~laG~~ 240 (270)
T 3l5o_A 195 ASVVDKTLPRLLELSRNARRITLVG-PGTPLAP--VLFEHG--LQELSGFM 240 (270)
T ss_dssp HHHHHTCHHHHHHHTTTSSEEEEES-TTCCCCG--GGGGTT--CSEEEEEE
T ss_pred ehhhcCCHHHHHhhCCCCCEEEEEC-CCchhhH--HHHhcC--cCEEEEEE
Confidence 456999999999998776 788999 6554333 466666 44444444
No 229
>1o6a_A Putative flagellar motor switch protein FLIN; C- terminal PR fragment, structural genomics, joint center for structural JCSG; 1.85A {Thermotoga maritima} SCOP: b.139.1.1 PDB: 1yab_A
Probab=24.03 E-value=11 Score=27.96 Aligned_cols=29 Identities=21% Similarity=0.168 Sum_probs=25.6
Q ss_pred hccccccchhhccCceEEEecCCcchhhh
Q 024788 174 LNKTLPDLARVASDGVLIFAGYPGQQRAK 202 (262)
Q Consensus 174 LNkTLPeLaRvsadglViF~G~Pgqqrak 202 (262)
||+..+|-+.+-.+|..+|.|.+|+..-+
T Consensus 48 Ld~~~~~~v~v~v~g~~i~~G~~g~~~~~ 76 (96)
T 1o6a_A 48 LDKLTGEPVDILVNGKLIARGEVVVIDEN 76 (96)
T ss_dssp EEEETTCCEEEEETTEEEEEEEEEEETTE
T ss_pred eCCCCCCcEEEEECCEEEEEEEEEEECCE
Confidence 67888899999999999999999998543
No 230
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=23.65 E-value=29 Score=29.94 Aligned_cols=30 Identities=10% Similarity=0.283 Sum_probs=13.1
Q ss_pred ccChhhhccccccchhhccCceEEEe-cCCc
Q 024788 168 YLSPKYLNKTLPDLARVASDGVLIFA-GYPG 197 (262)
Q Consensus 168 yLspryLNkTLPeLaRvsadglViF~-G~Pg 197 (262)
+..|...-..+-|+++--..++|||| |+|.
T Consensus 78 ~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~ 108 (297)
T 2yv2_A 78 FVPAPFAPDAVYEAVDAGIRLVVVITEGIPV 108 (297)
T ss_dssp CCCGGGHHHHHHHHHHTTCSEEEECCCCCCH
T ss_pred ecCHHHHHHHHHHHHHCCCCEEEEECCCCCH
Confidence 34444444444444444444444443 3443
No 231
>3idw_A Actin cytoskeleton-regulatory complex protein SLA; clathrin adaptor, endocytosis, SAM domain, yeast, actin-BIND membrane, endosome; 1.85A {Saccharomyces cerevisiae}
Probab=22.80 E-value=31 Score=25.94 Aligned_cols=23 Identities=13% Similarity=0.596 Sum_probs=16.9
Q ss_pred HHHHHHHhccccchHH--HHHHHHH
Q 024788 221 WIRYFVQTSLEENEPA--VKKFEQA 243 (262)
Q Consensus 221 W~r~F~qt~LeEnE~a--~KkFeqa 243 (262)
|.+||+.+|+..+-++ ...|+.-
T Consensus 5 Wf~FFl~aGv~~~~c~rYA~~F~~~ 29 (72)
T 3idw_A 5 WFEFFLNCGVDVSNCQRYTINFDRE 29 (72)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHc
Confidence 9999999999987654 3445443
No 232
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=22.41 E-value=21 Score=26.87 Aligned_cols=66 Identities=21% Similarity=0.273 Sum_probs=39.8
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhccccccc-----------cccccccccccchhHHHHhhhhhcceeee
Q 024788 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEET-----------EAWGVEPYDIEDADARCKSLVHKGIVRVA 144 (262)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~t-----------EAWGVEPydied~d~~CKsLvrKGiVRvA 144 (262)
.+.+|--.+.+.|...+++ +.+.|....|...|-..+.. +.-|++|- .+....+.|+++|+||..
T Consensus 10 ~l~ra~r~~~~~~~~~l~~-~gLt~~q~~vL~~l~~~~~~~~~~~t~~eLa~~l~~~~~---tvsr~v~~Le~~glVr~~ 85 (148)
T 4fx0_A 10 TTRRAARQLGQAYDRALRP-SGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVERT---TLTRNLEVMRRDGLVRVM 85 (148)
T ss_dssp HHHHHHHHHHHHHHHHHGG-GTCCHHHHHHHHHHHC---------CHHHHHHHHTCCHH---HHHHHHHHHHHTTSBC--
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHCCChh---hHHHHHHHHHHCCCEEee
Confidence 5677777777777766654 45666666666666554432 23344443 356788999999999976
Q ss_pred e
Q 024788 145 D 145 (262)
Q Consensus 145 D 145 (262)
|
T Consensus 86 ~ 86 (148)
T 4fx0_A 86 A 86 (148)
T ss_dssp -
T ss_pred C
Confidence 5
No 233
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=21.24 E-value=87 Score=26.27 Aligned_cols=73 Identities=16% Similarity=0.098 Sum_probs=46.5
Q ss_pred ceeeeecCCcchhhhhccccc-cccccccc--cccccchhHHHHhhhhhc--ceeeeeecCCCCCCCCCccEEEecccc
Q 024788 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVE--PYDIEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDAL 166 (262)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-~tEAWGVE--Pydied~d~~CKsLvrKG--iVRvADIkfpLPYR~kSFslVivSDaL 166 (262)
.+||-||-+|-.+--.|.+.. ...+++|| |--++-|..|.+..=-.. -++..|.-=++|-. ..|++|+++.+-
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~G 94 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITIAGMG 94 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC-cCCCEEEEcCCC
Confidence 579999999999887777765 45667765 334555665554331111 25677875455532 269998876653
No 234
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=21.13 E-value=65 Score=26.30 Aligned_cols=84 Identities=12% Similarity=0.092 Sum_probs=50.1
Q ss_pred EEEecccccccChhhhccccccchhhccCceEEEecC-CcchhhhHH---hhhhcCCccccccchhHHHHHHHhccccch
Q 024788 159 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGY-PGQQRAKVA---ELSKFGRPAKMRSSSWWIRYFVQTSLEENE 234 (262)
Q Consensus 159 lVivSDaLDyLspryLNkTLPeLaRvsadglViF~G~-Pgqqrakva---elskfgrpaK~rsssWW~r~F~qt~LeEnE 234 (262)
.||+=|=.|.|++.-+|.-+.-|.....+.++|++.. |..-...+. ..-.|..+-.---..|..+++.+.|+.-++
T Consensus 121 ~vliiDe~~~l~~~~~~~Ll~~le~~~~~~~~Il~~~~~~~l~~~l~sr~~~i~~~~l~~~~~~~~l~~~~~~~~~~~~~ 200 (373)
T 1jr3_A 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEP 200 (373)
T ss_dssp EEEEEECGGGSCHHHHHHHHHHHHSCCSSEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCH
T ss_pred EEEEEECcchhcHHHHHHHHHHHhcCCCceEEEEEeCChHhCcHHHHhheeEeeCCCCCHHHHHHHHHHHHHHcCCCCCH
Confidence 4566677899999888877766666677888888873 332111110 111233333333356777777777877666
Q ss_pred HHHHHHHH
Q 024788 235 PAVKKFEQ 242 (262)
Q Consensus 235 ~a~KkFeq 242 (262)
++.+.+-+
T Consensus 201 ~a~~~l~~ 208 (373)
T 1jr3_A 201 RALQLLAR 208 (373)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=21.10 E-value=42 Score=29.11 Aligned_cols=102 Identities=17% Similarity=0.165 Sum_probs=61.5
Q ss_pred cceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhh--h-hcceeeeeecCCCCC---CCCCccEEEec
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLV--H-KGIVRVADIKFPLPY---RAKSFPLVIVS 163 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPy--died~d~~CKsLv--r-KGiVRvADIkfpLPY---R~kSFslVivS 163 (262)
-.+||-+|-.|...--.+.+....+..|||.. -++.+..|++..= . +=-+..+|+.-.++. +..+|++||+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~- 299 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM- 299 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE-
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE-
Confidence 35899999999888777777666688898864 3666777765431 1 112445676433332 2468998875
Q ss_pred ccccccChhhh-------------ccccccc-hhhccCceEEEecCCcch
Q 024788 164 DALDYLSPKYL-------------NKTLPDL-ARVASDGVLIFAGYPGQQ 199 (262)
Q Consensus 164 DaLDyLspryL-------------NkTLPeL-aRvsadglViF~G~Pgqq 199 (262)
|. |++- .+.+.+. ..+..+|+++++-.|+..
T Consensus 300 dp-----P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 344 (396)
T 3c0k_A 300 DP-----PKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLM 344 (396)
T ss_dssp CC-----SSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTC
T ss_pred CC-----CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 31 2211 1112222 334677899988877643
No 236
>1sw5_A Osmoprotection protein (PROX); binding-protein, compatible solutes, cation-PI interactions, classical hydrogen bonds, protein binding; 1.80A {Archaeoglobus fulgidus} SCOP: c.94.1.1 PDB: 1sw4_A 1sw1_A 1sw2_A 3mam_A*
Probab=21.02 E-value=1.4e+02 Score=24.41 Aligned_cols=60 Identities=18% Similarity=0.235 Sum_probs=35.1
Q ss_pred hhhhHHHHHhccccceeeeecCCcchhhhhcccccccccc-ccccccccchhHHHHhhhhhcceeeeeecCCC
Q 024788 79 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAW-GVEPYDIEDADARCKSLVHKGIVRVADIKFPL 150 (262)
Q Consensus 79 ~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAW-GVEPydied~d~~CKsLvrKGiVRvADIkfpL 150 (262)
..+|-+.++||=+...+....|. . +..-|+.++..+| +-+|+-. +.+.+++.+.|=+--.
T Consensus 151 ~g~~~~~~~yGl~~~~~~~~~~~--~-~~~Al~~g~vd~~~~~~p~~~---------~~~~~l~~L~d~~~~~ 211 (275)
T 1sw5_A 151 DGLPQIKKVYGFEFKEVKQMEPT--L-MYEAIKNKQVDVIPAYTTDSR---------VDLFNLKILEDDKGAL 211 (275)
T ss_dssp TSHHHHHHHHTCCCSEEEECCGG--G-HHHHHHTTSCSEEEEETTCHH---------HHHTTEEECBCTTCCS
T ss_pred chHHHHHHhcCCCcccccCCCHH--H-HHHHHHcCCCeEEEEeCCCcc---------hhcCCeEEccCCcccC
Confidence 35788999999887777655443 3 3444555555553 3366543 2234667776654433
No 237
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=20.93 E-value=32 Score=30.19 Aligned_cols=28 Identities=21% Similarity=0.357 Sum_probs=22.6
Q ss_pred hhhccccccchhhccCc-eEEEecCCcch
Q 024788 172 KYLNKTLPDLARVASDG-VLIFAGYPGQQ 199 (262)
Q Consensus 172 ryLNkTLPeLaRvsadg-lViF~G~Pgqq 199 (262)
--+|+|+|+|-..+.++ .||+.|--.+-
T Consensus 196 TlvN~Ti~~lL~~~~~a~~vvl~GPS~p~ 224 (270)
T 2h1q_A 196 SVVDKTLPRLLELSRNARRITLVGPGTPL 224 (270)
T ss_dssp HHHHTCHHHHHHHTTTSSEEEEESTTCCC
T ss_pred eeecCCHHHHHHhCccCCeEEEEecChhh
Confidence 36899999999888888 99999954443
No 238
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=20.87 E-value=28 Score=38.49 Aligned_cols=95 Identities=20% Similarity=0.174 Sum_probs=38.1
Q ss_pred eeeeecCCcchhhhhccccccccccccccccccchhH--------HHHhh-hhhcceeeeeecCCCCCCCCCccEEEecc
Q 024788 94 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADA--------RCKSL-VHKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (262)
Q Consensus 94 kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~--------~CKsL-vrKGiVRvADIkfpLPYR~kSFslVivSD 164 (262)
+||.||..|......+|+.-+...-...-|...|.+. ..+.| +.++ .=|+.-|-|+-+.+|.+||+++
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~---~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQG---QWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEE---CCCSSCCCC-----CCEEEEEC
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccc---cccccccccCCCCceeEEEEcc
Confidence 8999999999877776654321111122355555442 22222 0000 0022223345667899999999
Q ss_pred cccccChhhhccccccchhh-ccCceEEEe
Q 024788 165 ALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (262)
Q Consensus 165 aLDyLspryLNkTLPeLaRv-sadglViF~ 193 (262)
.|. - -+.+++||-.+.++ ..+|.+++.
T Consensus 1320 vl~-~-t~~~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1320 ALA-T-LGDPAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp C----------------------CCEEEEE
T ss_pred ccc-c-cccHHHHHHHHHHhcCCCcEEEEE
Confidence 983 2 24577788776654 555655553
No 239
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=20.08 E-value=1e+02 Score=25.52 Aligned_cols=82 Identities=22% Similarity=0.212 Sum_probs=45.3
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhc--ceeeeee-cCCCCCCCCCccEEEecccccc
Q 024788 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG--IVRVADI-KFPLPYRAKSFPLVIVSDALDY 168 (262)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKG--iVRvADI-kfpLPYR~kSFslVivSDaLDy 168 (262)
-..||-|||.+-..-..|++....+.+|||.-+- .-..++.- ..+ -+..+|+ ++++|--.. .++|++|.--+
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~--~~~~~~~~-~~~~v~~i~~D~~~~~~~~~~~--~~~vv~NlPy~ 106 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDRE--MVENLKSI-GDERLEVINEDASKFPFCSLGK--ELKVVGNLPYN 106 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHH--HHHHHTTS-CCTTEEEECSCTTTCCGGGSCS--SEEEEEECCTT
T ss_pred cCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHH--HHHHHHhc-cCCCeEEEEcchhhCChhHccC--CcEEEEECchh
Confidence 3579999999998888888775577888874320 11111111 111 2334554 344442222 44777776555
Q ss_pred cChhhhcccc
Q 024788 169 LSPKYLNKTL 178 (262)
Q Consensus 169 LspryLNkTL 178 (262)
.+..-|-+-|
T Consensus 107 i~~~il~~ll 116 (249)
T 3ftd_A 107 VASLIIENTV 116 (249)
T ss_dssp THHHHHHHHH
T ss_pred ccHHHHHHHH
Confidence 5554444444
Done!