BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024793
(262 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357468567|ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355505623|gb|AES86765.1| 40S ribosomal protein S4 [Medicago truncatula]
Length = 264
Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust.
Identities = 246/259 (94%), Positives = 257/259 (99%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGIKL++IEEARKRQAAQ
Sbjct: 241 GKGIKLTVIEEARKRQAAQ 259
>gi|356559288|ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
Length = 264
Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust.
Identities = 246/262 (93%), Positives = 257/262 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR AAQ A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQAT 262
>gi|224087813|ref|XP_002308235.1| predicted protein [Populus trichocarpa]
gi|222854211|gb|EEE91758.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust.
Identities = 246/262 (93%), Positives = 256/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGSKPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKRQAA A
Sbjct: 241 GKGIKLSIIEEARKRQAASQTA 262
>gi|356551387|ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
Length = 264
Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/262 (93%), Positives = 257/262 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDT+KLDLEENKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR AAQ A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQAT 262
>gi|225448546|ref|XP_002276986.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust.
Identities = 246/262 (93%), Positives = 257/262 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRH+ VDGKVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHIFVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKG+FETIHIQDA GHEFATRLGNVF IGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGTFETIHIQDATGHEFATRLGNVFIIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEA+KR AAQAA+
Sbjct: 241 GKGIKLSIIEEAKKRLAAQAAS 262
>gi|449465362|ref|XP_004150397.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
gi|449496878|ref|XP_004160251.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/262 (93%), Positives = 257/262 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQDA GHEFATRLGNVFT+GKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR A+QAA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAV 262
>gi|449465358|ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
gi|449496881|ref|XP_004160252.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/262 (94%), Positives = 256/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQDA GHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR A+QA
Sbjct: 241 GKGIKLSIIEEARKRLASQATV 262
>gi|351725821|ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max]
gi|22138108|gb|AAM93434.1| 40S ribosomal S4 protein [Glycine max]
gi|255641970|gb|ACU21252.1| unknown [Glycine max]
Length = 264
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/262 (93%), Positives = 257/262 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QD+ GHEFATR+GNVFTIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDSTGHEFATRMGNVFTIGKGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR AAQ A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQAT 262
>gi|449509213|ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/262 (93%), Positives = 256/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQDA GHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKL+IIEEARKR A+Q+A
Sbjct: 241 GKGIKLTIIEEARKRLASQSAV 262
>gi|192912988|gb|ACF06602.1| 40S ribosomal protein S4 [Elaeis guineensis]
Length = 265
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/262 (93%), Positives = 257/262 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHV+VDGKVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVMVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NT+DGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLEANKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDALGHEFATR+GNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHLQDALGHEFATRIGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR AA AA
Sbjct: 241 GKGIKLSIIEEARKRLAASGAA 262
>gi|255549228|ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus communis]
gi|223545211|gb|EEF46720.1| 40S ribosomal protein S4, putative [Ricinus communis]
Length = 263
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/263 (94%), Positives = 257/263 (97%), Gaps = 1/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR-QAAQAAA 262
GKGIKLSIIEEARKR AAQA A
Sbjct: 241 GKGIKLSIIEEARKRLAAAQAVA 263
>gi|356496247|ref|XP_003516980.1| PREDICTED: 40S ribosomal protein S4-like [Glycine max]
Length = 264
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/259 (94%), Positives = 255/259 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVF IGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFIIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGIKLSIIEEARKR AAQ
Sbjct: 241 GKGIKLSIIEEARKRLAAQ 259
>gi|225434482|ref|XP_002275063.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/262 (93%), Positives = 257/262 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREK KGSFETIH+QDA GHEFATRLGNVF IGKG+KPWV+LPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKRKGSFETIHVQDATGHEFATRLGNVFIIGKGTKPWVTLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEA+KR AAQAA+
Sbjct: 241 GKGIKLSIIEEAQKRLAAQAAS 262
>gi|255647667|gb|ACU24295.1| unknown [Glycine max]
Length = 264
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/262 (93%), Positives = 257/262 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKK+LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKYLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDT+KLDLEENKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR AAQ A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQAT 262
>gi|73759787|dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]
Length = 264
Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/262 (93%), Positives = 255/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIADFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKGSFET+HIQD+LGHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETVHIQDSLGHEFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKL+IIEEARKR AQ+A
Sbjct: 241 GKGIKLTIIEEARKRNVAQSAT 262
>gi|255543308|ref|XP_002512717.1| 40S ribosomal protein S4, putative [Ricinus communis]
gi|223548678|gb|EEF50169.1| 40S ribosomal protein S4, putative [Ricinus communis]
Length = 263
Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/262 (93%), Positives = 255/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKIT+FIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATR+GNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRMGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR AA A
Sbjct: 241 GKGIKLSIIEEARKRLAASQTA 262
>gi|255648349|gb|ACU24626.1| unknown [Glycine max]
Length = 264
Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/262 (93%), Positives = 255/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMD VSIPKTNENF LLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDAVSIPKTNENFHLLYDTKGRFRLHSVRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR AAQ A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQAT 262
>gi|225439460|ref|XP_002268192.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/262 (92%), Positives = 257/262 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV+ VQFGQKGIPY+NTYDGRTIRYPDPLIKANDT+KLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVKGVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTVKLDLESNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IK+REKHKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPWV+LPK
Sbjct: 181 VMVTGGRNRGRVGVIKSREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVTLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEA+KR AAQA+A
Sbjct: 241 GKGIKLSIIEEAKKRLAAQASA 262
>gi|224125756|ref|XP_002329710.1| predicted protein [Populus trichocarpa]
gi|222870618|gb|EEF07749.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/262 (93%), Positives = 255/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR AA A
Sbjct: 241 GKGIKLSIIEEARKRLAASQAT 262
>gi|192912992|gb|ACF06604.1| 40S ribosomal protein S4 [Elaeis guineensis]
Length = 265
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/262 (93%), Positives = 254/262 (96%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFG KGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE KI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGHKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETYKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHLQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR AA AA
Sbjct: 241 GKGIKLSIIEEARKRLAASGAA 262
>gi|363806782|ref|NP_001242281.1| uncharacterized protein LOC100812132 [Glycine max]
gi|255645121|gb|ACU23059.1| unknown [Glycine max]
Length = 264
Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/262 (93%), Positives = 255/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLK ALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKCALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+ D+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVIDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEARKR AAQ A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQAT 262
>gi|224139252|ref|XP_002323021.1| predicted protein [Populus trichocarpa]
gi|222867651|gb|EEF04782.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/261 (92%), Positives = 255/261 (97%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLR++EAKF
Sbjct: 62 ISILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAKF 121
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+V
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVV 181
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGSKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKG 241
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGIKLSIIEEA+KR AA AA
Sbjct: 242 KGIKLSIIEEAKKRLAASQAA 262
>gi|82400118|gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tuberosum]
Length = 264
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/262 (91%), Positives = 256/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQR V+VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE+K
Sbjct: 61 VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKL+IIEEA+KR AAQ+A
Sbjct: 241 GKGIKLTIIEEAKKRLAAQSAT 262
>gi|1173257|sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4
gi|457803|emb|CAA54095.1| ribosomal protein S4 [Solanum tuberosum]
Length = 264
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/262 (91%), Positives = 256/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQR V+VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE+K
Sbjct: 61 VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKL+IIE+ARKR AAQ+A
Sbjct: 241 GKGIKLTIIEDARKRLAAQSAT 262
>gi|18415395|ref|NP_568179.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
gi|20143904|sp|P49204.4|RS42_ARATH RecName: Full=40S ribosomal protein S4-2
gi|7546687|emb|CAB87265.1| ribosomal protein S4 [Arabidopsis thaliana]
gi|15292999|gb|AAK93610.1| putative 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|17979543|gb|AAL50106.1| AT5g07090/T28J14_30 [Arabidopsis thaliana]
gi|19310835|gb|AAL85148.1| putative 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|20147251|gb|AAM10339.1| AT5g07090/T28J14_30 [Arabidopsis thaliana]
gi|21537414|gb|AAM61755.1| 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|332003724|gb|AED91107.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
Length = 262
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/262 (91%), Positives = 256/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKL+IIEEARKR A+Q AA
Sbjct: 241 GKGIKLTIIEEARKRLASQQAA 262
>gi|118480993|gb|ABK92450.1| unknown [Populus trichocarpa]
Length = 263
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/262 (91%), Positives = 255/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLR++EAK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKF VGN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFGVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGSKPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEA++R AA AA
Sbjct: 241 GKGIKLSIIEEAKERLAASQAA 262
>gi|118484853|gb|ABK94293.1| unknown [Populus trichocarpa]
Length = 263
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/262 (92%), Positives = 255/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALT RE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+AILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAK
Sbjct: 61 VLAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEA+KR AA AA
Sbjct: 241 GKGIKLSIIEEAKKRLAASQAA 262
>gi|18398393|ref|NP_565414.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
gi|75163156|sp|Q93VH9.1|RS41_ARATH RecName: Full=40S ribosomal protein S4-1
gi|13877537|gb|AAK43846.1|AF370469_1 Unknown protein [Arabidopsis thaliana]
gi|14334916|gb|AAK59636.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|17104537|gb|AAL34157.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|17978689|gb|AAL47338.1| unknown protein [Arabidopsis thaliana]
gi|21536498|gb|AAM60830.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|330251522|gb|AEC06616.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
Length = 261
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/261 (91%), Positives = 255/261 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGIKL+IIEEARKR +AQ A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261
>gi|15237195|ref|NP_200650.1| 40S ribosomal protein S4-3 [Arabidopsis thaliana]
gi|115311859|sp|Q8VYK6.2|RS43_ARATH RecName: Full=40S ribosomal protein S4-3
gi|16226259|gb|AAL16117.1|AF428285_1 AT5g58420/mqj2_10 [Arabidopsis thaliana]
gi|21592333|gb|AAM64284.1| ribosomal protein S4-like [Arabidopsis thaliana]
gi|332009668|gb|AED97051.1| 40S ribosomal protein S4-3 [Arabidopsis thaliana]
Length = 262
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/262 (90%), Positives = 255/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKL+IIEEARKR A+Q AA
Sbjct: 241 GKGIKLTIIEEARKRLASQQAA 262
>gi|9759565|dbj|BAB11167.1| 40S ribosomal protein S4 [Arabidopsis thaliana]
Length = 263
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/261 (91%), Positives = 255/261 (97%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREV
Sbjct: 3 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKF
Sbjct: 63 ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+V
Sbjct: 123 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKG
Sbjct: 183 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 242
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGIKL+IIEEARKR A+Q AA
Sbjct: 243 KGIKLTIIEEARKRLASQQAA 263
>gi|224122992|ref|XP_002318967.1| predicted protein [Populus trichocarpa]
gi|222857343|gb|EEE94890.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/261 (92%), Positives = 254/261 (97%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALT REV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTGREV 61
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
+AILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAKF
Sbjct: 62 LAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKF 121
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+V
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVV 181
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKG 241
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGIKLSIIEEA+KR AA AA
Sbjct: 242 KGIKLSIIEEAKKRLAASQAA 262
>gi|297832340|ref|XP_002884052.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297329892|gb|EFH60311.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/261 (91%), Positives = 255/261 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIP++NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+
Sbjct: 121 FKLCKVRSIQFGQKGIPFLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGIKL+IIEEARKR +AQ A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261
>gi|297806729|ref|XP_002871248.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297317085|gb|EFH47507.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/262 (90%), Positives = 256/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKR+NAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRINAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIP++NTYDGRTIRYPDPLIK NDT+KLDLEENKI +FIKFDVGN+
Sbjct: 121 FKLCKVRSIQFGQKGIPFLNTYDGRTIRYPDPLIKPNDTVKLDLEENKIVEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNVFTIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWMSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKL+IIEEARKR A+Q AA
Sbjct: 241 GKGIKLTIIEEARKRLASQQAA 262
>gi|17979233|gb|AAL49933.1| AT5g58420/mqj2_10 [Arabidopsis thaliana]
gi|23505827|gb|AAN28773.1| At5g58420/mqj2_10 [Arabidopsis thaliana]
Length = 262
Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/262 (90%), Positives = 255/262 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRL+YALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLEYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKL+IIEEARKR A+Q AA
Sbjct: 241 GKGIKLTIIEEARKRLASQQAA 262
>gi|224135847|ref|XP_002322175.1| predicted protein [Populus trichocarpa]
gi|222869171|gb|EEF06302.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/262 (91%), Positives = 253/262 (96%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHV VDGKVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLR++EAK
Sbjct: 61 VIAILMQRHVFVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE KI D+IKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENYKIVDYIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSIIEEA+KR AA A
Sbjct: 241 GKGIKLSIIEEAKKRLAASQNA 262
>gi|297793379|ref|XP_002864574.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297310409|gb|EFH40833.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/262 (90%), Positives = 253/262 (96%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEA+
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKL+IIEEARKR A Q A
Sbjct: 241 GKGIKLTIIEEARKRLAGQQVA 262
>gi|357506135|ref|XP_003623356.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355498371|gb|AES79574.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|388496326|gb|AFK36229.1| unknown [Medicago truncatula]
Length = 265
Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/255 (93%), Positives = 251/255 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKITDFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLEQNKITDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG IKNR+KH G+FETIH+QDA GHEFATRLGNVFTIG+G KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGFIKNRKKHMGTFETIHVQDAAGHEFATRLGNVFTIGRGPKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
G+GIKL++IEEARKR
Sbjct: 241 GRGIKLTVIEEARKR 255
>gi|1173256|sp|P46299.1|RS4_GOSHI RecName: Full=40S ribosomal protein S4
gi|488739|emb|CAA55882.1| ribosomal protein, small subunit 4e (RS4e) [Gossypium hirsutum]
Length = 262
Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/262 (91%), Positives = 252/262 (96%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHV+VDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRF LH++ +E K
Sbjct: 61 VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
KGIKLSIIEEARKR AAQ AA
Sbjct: 241 RKGIKLSIIEEARKRLAAQNAA 262
>gi|346470359|gb|AEO35024.1| hypothetical protein [Amblyomma maculatum]
Length = 265
Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/255 (92%), Positives = 251/255 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWML+KLGGAFAPKPSSGPHK+RECLPLIL+LRN+LKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLNKLGGAFAPKPSSGPHKARECLPLILILRNKLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHV+VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK
Sbjct: 61 VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKITDFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLETNKITDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGI L+IIEEARKR
Sbjct: 241 GKGIMLTIIEEARKR 255
>gi|257815610|gb|ACV70143.1| putative 40S ribosomal protein S4 [Jatropha curcas]
Length = 264
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/251 (95%), Positives = 245/251 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRL YALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLPYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLV GKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVLVVGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHIQDA G EFATRLGNVFTIGKG+KPWVS PK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGPEFATRLGNVFTIGKGTKPWVSFPK 240
Query: 241 GKGIKLSIIEE 251
GKGIKLSIIEE
Sbjct: 241 GKGIKLSIIEE 251
>gi|3914899|sp|O22424.1|RS4_MAIZE RecName: Full=40S ribosomal protein S4
gi|2331301|gb|AAB66899.1| ribosomal protein S4 type I [Zea mays]
gi|194698488|gb|ACF83328.1| unknown [Zea mays]
gi|195618184|gb|ACG30922.1| 40S ribosomal protein S4 [Zea mays]
gi|195625650|gb|ACG34655.1| 40S ribosomal protein S4 [Zea mays]
gi|413932477|gb|AFW67028.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 265
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/255 (91%), Positives = 250/255 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH +RDE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKLSIIEE RKR
Sbjct: 241 GKGIKLSIIEEQRKR 255
>gi|242032315|ref|XP_002463552.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
gi|241917406|gb|EER90550.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
Length = 264
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/255 (91%), Positives = 250/255 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH +RDE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKLSIIEE RKR
Sbjct: 241 GKGIKLSIIEEQRKR 255
>gi|242052937|ref|XP_002455614.1| hypothetical protein SORBIDRAFT_03g014380 [Sorghum bicolor]
gi|241927589|gb|EES00734.1| hypothetical protein SORBIDRAFT_03g014380 [Sorghum bicolor]
Length = 265
Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/256 (91%), Positives = 249/256 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRHVLVDGKVRTDKTYP+GFMDV+SIPKT EN+RLLYDTKGRFRLHS+RDE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPSGFMDVISIPKTGENYRLLYDTKGRFRLHSVRDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKGSFETIH++DALGH FATR+GNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRMGNVFTIGKGNKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQ 256
GKGIKLSIIEE RKR
Sbjct: 241 GKGIKLSIIEEQRKRD 256
>gi|357483185|ref|XP_003611879.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|357516021|ref|XP_003628299.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|217074206|gb|ACJ85463.1| unknown [Medicago truncatula]
gi|355513214|gb|AES94837.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355522321|gb|AET02775.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|388493800|gb|AFK34966.1| unknown [Medicago truncatula]
gi|388509492|gb|AFK42812.1| unknown [Medicago truncatula]
Length = 265
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/251 (92%), Positives = 248/251 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHSVRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP+I+ANDTIKLDLEENKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGG+NRGRVG+IKNREKHKG+FETIH+QDA GHEFATRL NVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGKNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLVNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEE 251
GKGIKL++IEE
Sbjct: 241 GKGIKLTVIEE 251
>gi|242087691|ref|XP_002439678.1| hypothetical protein SORBIDRAFT_09g018320 [Sorghum bicolor]
gi|241944963|gb|EES18108.1| hypothetical protein SORBIDRAFT_09g018320 [Sorghum bicolor]
Length = 263
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/261 (88%), Positives = 251/261 (96%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQR V+VDGKVRTDKTYP+GFMDVVSIPKT ENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VISILMQRLVMVDGKVRTDKTYPSGFMDVVSIPKTGENFRLLYDTKGRFRLHSIRDDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FK+CKVRSVQFGQKGIP++NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+
Sbjct: 121 FKMCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IK+REKHKGSFETIH++D+LGH+FATR+GNVFTIGK KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKSREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKDKKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGIKLSIIEEARKR A AA
Sbjct: 241 GKGIKLSIIEEARKRNAEAAA 261
>gi|115436514|ref|NP_001043015.1| Os01g0358400 [Oryza sativa Japonica Group]
gi|53791616|dbj|BAD52963.1| putative 40S ribosomal protein S4 [Oryza sativa Japonica Group]
gi|113532546|dbj|BAF04929.1| Os01g0358400 [Oryza sativa Japonica Group]
gi|125525886|gb|EAY74000.1| hypothetical protein OsI_01884 [Oryza sativa Indica Group]
gi|125570348|gb|EAZ11863.1| hypothetical protein OsJ_01737 [Oryza sativa Japonica Group]
gi|149391309|gb|ABR25672.1| 40S ribosomal protein S4 [Oryza sativa Indica Group]
gi|215692713|dbj|BAG88133.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/255 (91%), Positives = 248/255 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKGSFETIH++DALGH FATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKLSIIEE RKR
Sbjct: 241 GKGIKLSIIEEQRKR 255
>gi|115443689|ref|NP_001045624.1| Os02g0105900 [Oryza sativa Japonica Group]
gi|109940160|sp|P49398.3|RS4_ORYSJ RecName: Full=40S ribosomal protein S4; AltName: Full=SCAR protein
SS620
gi|313103631|pdb|3IZ6|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|50252099|dbj|BAD28085.1| putative ribosomal protein S4 [Oryza sativa Japonica Group]
gi|113535155|dbj|BAF07538.1| Os02g0105900 [Oryza sativa Japonica Group]
gi|125537716|gb|EAY84111.1| hypothetical protein OsI_05494 [Oryza sativa Indica Group]
gi|125580492|gb|EAZ21423.1| hypothetical protein OsJ_05027 [Oryza sativa Japonica Group]
gi|169244433|gb|ACA50490.1| 40S ribosomal protein S4 [Oryza sativa Japonica Group]
gi|215678909|dbj|BAG96339.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215734827|dbj|BAG95549.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415995|gb|ADM86872.1| 40S ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 265
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/255 (90%), Positives = 249/255 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP+IKANDTIK+DLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKGSFETIH++DALGH+FATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKLSIIEE RKR
Sbjct: 241 GKGIKLSIIEEQRKR 255
>gi|115463485|ref|NP_001055342.1| Os05g0368300 [Oryza sativa Japonica Group]
gi|113578893|dbj|BAF17256.1| Os05g0368300 [Oryza sativa Japonica Group]
Length = 263
Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/261 (89%), Positives = 249/261 (95%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRHV+VDGKVRTDKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AK
Sbjct: 61 VISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIP++NT DGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGNI
Sbjct: 121 FKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGIKLSIIEEARKR A AA
Sbjct: 241 GKGIKLSIIEEARKRNAEAAA 261
>gi|44894458|gb|AAS48726.1| ribosomal protein S4 [Zea mays]
Length = 265
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/255 (90%), Positives = 248/255 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH +RDE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP IKANDTIK+DLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPPIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKGS ETIH++D+LGH+FATR+GNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSLETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKLSIIEE RKR
Sbjct: 241 GKGIKLSIIEEQRKR 255
>gi|222631333|gb|EEE63465.1| hypothetical protein OsJ_18278 [Oryza sativa Japonica Group]
Length = 398
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/260 (89%), Positives = 248/260 (95%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREV
Sbjct: 137 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 196
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ILMQRHV+VDGKVRTDKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKF
Sbjct: 197 ISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKF 256
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVRSVQFGQKGIP++NT DGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGNIV
Sbjct: 257 KLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIV 316
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRN GRVG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKG
Sbjct: 317 MVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKG 376
Query: 242 KGIKLSIIEEARKRQAAQAA 261
KGIKLSIIEEARKR A AA
Sbjct: 377 KGIKLSIIEEARKRNAEAAA 396
>gi|326500636|dbj|BAJ94984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 265
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/255 (89%), Positives = 247/255 (96%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +ILMQRH++VDGKVRTDKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE+AK
Sbjct: 61 VQSILMQRHIMVDGKVRTDKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKG+FETIH++DA GH+FATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKL+IIEE RKR
Sbjct: 241 GKGIKLTIIEEQRKR 255
>gi|125552065|gb|EAY97774.1| hypothetical protein OsI_19685 [Oryza sativa Indica Group]
Length = 279
Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/260 (88%), Positives = 248/260 (95%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREV
Sbjct: 18 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 77
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ILMQRHV+VDGKVRTDKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKF
Sbjct: 78 ISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKF 137
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVRSVQFGQKGIP++NT DGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+V
Sbjct: 138 KLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNVV 197
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRN GRVG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKG
Sbjct: 198 MVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKG 257
Query: 242 KGIKLSIIEEARKRQAAQAA 261
KGIKLSIIEEARKR A AA
Sbjct: 258 KGIKLSIIEEARKRNAEAAA 277
>gi|2345154|gb|AAB67831.1| ribsomal protein S4 [Zea mays]
gi|194707820|gb|ACF87994.1| unknown [Zea mays]
gi|195607094|gb|ACG25377.1| 40S ribosomal protein S4 [Zea mays]
gi|195653033|gb|ACG45984.1| 40S ribosomal protein S4 [Zea mays]
gi|414873848|tpg|DAA52405.1| TPA: ribosomal protein S4 [Zea mays]
Length = 265
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/256 (88%), Positives = 247/256 (96%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYAL YRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRLH +RDE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTMENYRLLYDTKGRFRLHPIRDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKG F+TIH++D++GH+FATR+GNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGGFDTIHVEDSMGHQFATRMGNVFTIGKGNKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQ 256
GKGIKLSIIEE R+R
Sbjct: 241 GKGIKLSIIEEQRRRD 256
>gi|357134623|ref|XP_003568916.1| PREDICTED: 40S ribosomal protein S4-like [Brachypodium distachyon]
Length = 265
Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/255 (88%), Positives = 246/255 (96%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +ILMQR +LVDGKVRTDKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE++K
Sbjct: 61 VQSILMQRQILVDGKVRTDKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDSK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKG+FETIH++DA GH+FATRLGNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKL+IIEE RKR
Sbjct: 241 GKGIKLTIIEEQRKR 255
>gi|48596901|dbj|BAD22763.1| ribosomal protein [Bromus inermis]
Length = 265
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/255 (88%), Positives = 246/255 (96%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +ILMQRH++VDGKVRTDKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE+AK
Sbjct: 61 VQSILMQRHIMVDGKVRTDKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRSVQFGQKGIPY+NT DGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTNDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+IKNREKHKG+FETIH++DA GH+FATRLGNVFTIGKG+KPWV+LPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVTLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKL+IIEE RKR
Sbjct: 241 GKGIKLTIIEEQRKR 255
>gi|297736557|emb|CBI25428.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/244 (93%), Positives = 239/244 (97%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRH+ VDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHIFVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 61 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
EKHKG+FETIHIQDA GHEFATRLGNVF IGKG+KPWVSLPKGKGIKLSIIEEA+KR AA
Sbjct: 181 EKHKGTFETIHIQDATGHEFATRLGNVFIIGKGTKPWVSLPKGKGIKLSIIEEAKKRLAA 240
Query: 259 QAAA 262
QAA+
Sbjct: 241 QAAS 244
>gi|297745843|emb|CBI15899.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/244 (93%), Positives = 239/244 (97%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 61 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
EK KGSFETIH+QDA GHEFATRLGNVF IGKG+KPWV+LPKGKGIKLSIIEEA+KR AA
Sbjct: 181 EKRKGSFETIHVQDATGHEFATRLGNVFIIGKGTKPWVTLPKGKGIKLSIIEEAQKRLAA 240
Query: 259 QAAA 262
QAA+
Sbjct: 241 QAAS 244
>gi|17367482|sp|O81363.1|RS4_PRUAR RecName: Full=40S ribosomal protein S4
gi|3264763|gb|AAC24585.1| 40S ribosomal protein S4 [Prunus armeniaca]
Length = 261
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/255 (89%), Positives = 243/255 (95%), Gaps = 4/255 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V++ILMQRH+LVDGK+ + DVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61 VVSILMQRHILVDGKIH----FCIRLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESK 116
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+
Sbjct: 117 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNV 176
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPK
Sbjct: 177 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPK 236
Query: 241 GKGIKLSIIEEARKR 255
GKGIKL+I+EEA+KR
Sbjct: 237 GKGIKLTILEEAKKR 251
>gi|79327186|ref|NP_001031846.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
gi|332003725|gb|AED91108.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
Length = 244
Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/244 (90%), Positives = 238/244 (97%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
EKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240
Query: 259 QAAA 262
Q AA
Sbjct: 241 QQAA 244
>gi|10177019|dbj|BAB10257.1| ribosomal protein S4 [Arabidopsis thaliana]
Length = 244
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/244 (90%), Positives = 237/244 (97%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+NTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
EKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240
Query: 259 QAAA 262
Q AA
Sbjct: 241 QQAA 244
>gi|116779177|gb|ABK21170.1| unknown [Picea sitchensis]
gi|116781965|gb|ABK22318.1| unknown [Picea sitchensis]
gi|148909584|gb|ABR17884.1| unknown [Picea sitchensis]
Length = 263
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/256 (85%), Positives = 240/256 (93%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL++++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAI+MQR + VDGKVRTDK YPAGFMDV+SI KTNENFRLLYD KGRFRLHS++DEEAK
Sbjct: 61 VIAIVMQRLISVDGKVRTDKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRSVQFG KGIPY+NTYDGRTIRYPDPL+KANDTIK+DLE KI +FIKFDVGN+
Sbjct: 121 YKLCKVRSVQFGDKGIPYLNTYDGRTIRYPDPLVKANDTIKIDLETGKIKEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQ 256
GKG+KLSIIEEARKR
Sbjct: 241 GKGVKLSIIEEARKRH 256
>gi|116781974|gb|ABK22322.1| unknown [Picea sitchensis]
gi|116782831|gb|ABK22679.1| unknown [Picea sitchensis]
gi|224284198|gb|ACN39835.1| unknown [Picea sitchensis]
gi|224285571|gb|ACN40504.1| unknown [Picea sitchensis]
gi|224286248|gb|ACN40833.1| unknown [Picea sitchensis]
Length = 263
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/256 (85%), Positives = 240/256 (93%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL++++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAI+MQR + VDGKVRTDK YPAGFMDV+SI KTNENFRLLYD KGRFRLHS++DEEAK
Sbjct: 61 VIAIVMQRLISVDGKVRTDKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRSVQFG KGIPY+NTYDGRTIRYPDPL+KANDTIK+DLE KI +FIKFDVGN+
Sbjct: 121 YKLCKVRSVQFGDKGIPYLNTYDGRTIRYPDPLVKANDTIKVDLETGKIKEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+MVTGGRNRGRVG+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKG+KPWVSLPK
Sbjct: 181 IMVTGGRNRGRVGVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQ 256
GKG+KLSIIEEARKR
Sbjct: 241 GKGVKLSIIEEARKRH 256
>gi|47777385|gb|AAT38019.1| putative 40S ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 245
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/243 (88%), Positives = 232/243 (95%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQRHV+VDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
DKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKFKLCKVRSVQFGQKGIP+
Sbjct: 61 DKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPF 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+NT DGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGNIVMVTGGRN GRVG+IK+R
Sbjct: 121 LNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
EKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKGKGIKLSIIEEARKR A
Sbjct: 181 EKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAE 240
Query: 259 QAA 261
AA
Sbjct: 241 AAA 243
>gi|168014621|ref|XP_001759850.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688980|gb|EDQ75354.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/263 (76%), Positives = 241/263 (91%), Gaps = 1/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+AI+MQR + +DGKVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH++ EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRS QFG KG+PYI T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFD+GNI
Sbjct: 121 YKLCKVRSAQFGDKGVPYITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGR+G+I++REKHKGSF+ IH+ D+ G +FATR+GNVFT+G+G+KPW++LP+
Sbjct: 181 VMVTGGRNRGRIGVIQHREKHKGSFDIIHVTDSTGQQFATRMGNVFTVGQGTKPWITLPR 240
Query: 241 GKGIKLSIIEEARKR-QAAQAAA 262
GKGIKLSI+EEA+KR QA +A+A
Sbjct: 241 GKGIKLSIVEEAKKRTQALKASA 263
>gi|167998342|ref|XP_001751877.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696975|gb|EDQ83312.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/263 (77%), Positives = 241/263 (91%), Gaps = 1/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+AI+MQR + +DGKVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH++ EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRS QFG KG+P+I T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFD+GNI
Sbjct: 121 YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGR+G+I++REKHKGSF+ IH+ DA G +FATR+GNVFT+G+G+KPW++LP+
Sbjct: 181 VMVTGGRNRGRIGVIQHREKHKGSFDIIHVTDATGQQFATRMGNVFTVGQGTKPWITLPR 240
Query: 241 GKGIKLSIIEEARKR-QAAQAAA 262
GKGIKLSI+EEA+KR QA +AAA
Sbjct: 241 GKGIKLSIVEEAKKRGQALKAAA 263
>gi|168057168|ref|XP_001780588.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667954|gb|EDQ54571.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/258 (77%), Positives = 237/258 (91%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+AI+MQR + +DGKVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH + EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRS QFG KG+PYI T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFD+GNI
Sbjct: 121 YKLCKVRSAQFGDKGVPYITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGR+G+I++REKHKGSF+ IH+ D+ G++FATR+GNVFTIG+G+KPW++LP+
Sbjct: 181 VMVTGGRNRGRIGVIQHREKHKGSFDIIHVTDSTGNQFATRMGNVFTIGQGTKPWITLPR 240
Query: 241 GKGIKLSIIEEARKRQAA 258
GKGIKLSI+EEA+KR+A
Sbjct: 241 GKGIKLSIVEEAKKRKAV 258
>gi|168014095|ref|XP_001759591.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689130|gb|EDQ75503.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/263 (76%), Positives = 241/263 (91%), Gaps = 1/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+AI+MQR + +DGKVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH++ EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRS QFG KG+P+I T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFD+GNI
Sbjct: 121 YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGR+G+I++REKHKGSF+ IH+ D+ G +FATR+GNVFT+G+G+KPW++LP+
Sbjct: 181 VMVTGGRNRGRIGVIQHREKHKGSFDIIHVTDSTGQQFATRMGNVFTVGQGTKPWITLPR 240
Query: 241 GKGIKLSIIEEARKR-QAAQAAA 262
GKGIKLSI+EEA+KR QA +AAA
Sbjct: 241 GKGIKLSIVEEAKKRTQALKAAA 263
>gi|168066840|ref|XP_001785339.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663064|gb|EDQ49851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 200/262 (76%), Positives = 239/262 (91%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+AI+MQR + +DGKVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH + EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR+ QFG KG+P++ T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFD+GNI
Sbjct: 121 YKLCKVRAAQFGDKGVPHVTTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGR+G+I +REKHKGSF+ IH+ DA+G++FATR+GNVFTIG+G+KPW++LP+
Sbjct: 181 VMVTGGRNRGRIGVIHHREKHKGSFDIIHVTDAIGNQFATRMGNVFTIGQGTKPWITLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSI+EEA+KR+A + A
Sbjct: 241 GKGIKLSIVEEAKKRKATEKQA 262
>gi|168027041|ref|XP_001766039.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682682|gb|EDQ69098.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 308
Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/263 (77%), Positives = 239/263 (90%), Gaps = 2/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+AI+MQR + +DGKVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH + EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRS QFG KG+P+I T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFDVGNI
Sbjct: 121 YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDVGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGR+G+I +REKHKGSF+ IH+ DA G++FATR+GNV+TIG+G+KPW++LP+
Sbjct: 181 VMVTGGRNRGRIGVIHHREKHKGSFDIIHVTDATGNQFATRMGNVYTIGQGTKPWITLPR 240
Query: 241 GKGIKLSIIEEARKRQAA--QAA 261
GKGIKLSI+EEA+KR+A QAA
Sbjct: 241 GKGIKLSIVEEAKKRKATLKQAA 263
>gi|302805125|ref|XP_002984314.1| hypothetical protein SELMODRAFT_271698 [Selaginella moellendorffii]
gi|300148163|gb|EFJ14824.1| hypothetical protein SELMODRAFT_271698 [Selaginella moellendorffii]
Length = 258
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/255 (78%), Positives = 233/255 (91%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLK LNAPKHWML KLGGAFAPKPSSGPHK RECLPL++VLRNRL YALTYRE
Sbjct: 1 MVRGPKKHLKVLNAPKHWMLSKLGGAFAPKPSSGPHKERECLPLVIVLRNRLNYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+AI+MQ+ + +DGKVRTDK YPAGFMDV+++ K +EN+RLLYD+KGRF LHS+ EEAK
Sbjct: 61 VVAIVMQKLISIDGKVRTDKCYPAGFMDVLTVGKVDENYRLLYDSKGRFTLHSINSEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVR+V+FG KGIP++ TYDGRTIRYPDPLIKANDTIK+DLE KI +FIKFDVGN+
Sbjct: 121 FKLCKVRAVRFGAKGIPFLTTYDGRTIRYPDPLIKANDTIKIDLETGKIKEFIKFDVGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG I++REKHKGSF+ IHI+D++G +FATR+GNVFTIG+G+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGTIQHREKHKGSFDIIHIKDSVGQDFATRMGNVFTIGQGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKLSI+EEARKR
Sbjct: 241 GKGIKLSIVEEARKR 255
>gi|302781420|ref|XP_002972484.1| hypothetical protein SELMODRAFT_148442 [Selaginella moellendorffii]
gi|300159951|gb|EFJ26570.1| hypothetical protein SELMODRAFT_148442 [Selaginella moellendorffii]
Length = 258
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/255 (78%), Positives = 233/255 (91%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLK LNAPKHWML KLGGAFAPKPSSGPHK RECLPL++VLRNRL YALTYRE
Sbjct: 1 MVRGPKKHLKVLNAPKHWMLSKLGGAFAPKPSSGPHKERECLPLVIVLRNRLNYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+AI+MQ+ + +DGKVRTDK YPAGFMDV+++ K +EN+RLLYD+KGRF LHS+ EEAK
Sbjct: 61 VVAIVMQKLISIDGKVRTDKCYPAGFMDVLTVGKVDENYRLLYDSKGRFTLHSINAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVR+V+FG KGIP++ TYDGRTIRYPDPLIKANDTIK+DLE KI +FIKFDVGN+
Sbjct: 121 FKLCKVRAVRFGAKGIPFLTTYDGRTIRYPDPLIKANDTIKIDLETGKIKEFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG I++REKHKGSF+ IHI+D++G +FATR+GNVFTIG+G+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGTIQHREKHKGSFDIIHIKDSVGQDFATRMGNVFTIGQGTKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKLSI+EEARKR
Sbjct: 241 GKGIKLSIVEEARKR 255
>gi|351721738|ref|NP_001235428.1| uncharacterized protein LOC100500000 [Glycine max]
gi|255628423|gb|ACU14556.1| unknown [Glycine max]
Length = 205
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/205 (95%), Positives = 202/205 (98%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSF 205
VMVTGGRNRGRVG+IKNREKHKG
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGKL 205
>gi|431912035|gb|ELK14176.1| Protein DBF4 like protein B [Pteropus alecto]
Length = 980
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 182/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|384499638|gb|EIE90129.1| 40S ribosomal protein S4-A [Rhizopus delemar RA 99-880]
Length = 262
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/251 (72%), Positives = 214/251 (85%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH+KRL APKHWMLDKL G++APKPSSGPHK+RECLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHMKRLAAPKHWMLDKLLGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +ILMQR V VDGKVRTD T+PAGFMDV+S+ KT ENFRL+YD KGRF +H + DEEAK
Sbjct: 61 VQSILMQRLVKVDGKVRTDSTFPAGFMDVISVEKTGENFRLVYDVKGRFAVHRITDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ V G KG+PYI T+DGRTIRYPDPLIK NDTI+ ++E KI DF+KFDVGN+
Sbjct: 121 YKLCKVKKVMIGSKGVPYITTHDGRTIRYPDPLIKTNDTIRFNIETGKIEDFVKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG + +RE+H G FE +HI+DAL H FATR+ NVFTIG+G+KPW+SLPK
Sbjct: 181 VMVTGGRNIGRVGQLVHRERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNKPWISLPK 240
Query: 241 GKGIKLSIIEE 251
GKG+KLSI EE
Sbjct: 241 GKGVKLSITEE 251
>gi|384487368|gb|EIE79548.1| 40S ribosomal protein S4-A [Rhizopus delemar RA 99-880]
Length = 262
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/251 (72%), Positives = 214/251 (85%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH+KRL APKHWMLDKL G++APKPSSGPHK+RECLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHMKRLAAPKHWMLDKLLGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +ILMQR V VDGKVRTD T+PAGFMDV+S+ KT ENFRL+YD KGRF +H + DEEAK
Sbjct: 61 VQSILMQRLVKVDGKVRTDSTFPAGFMDVISVEKTGENFRLVYDVKGRFAVHRITDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ V G KG+PYI T+DGRTIRYPDPLIK NDTI+ ++E KI DF+KFDVGN+
Sbjct: 121 YKLCKVKKVMIGSKGVPYITTHDGRTIRYPDPLIKTNDTIRFNIETGKIEDFVKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG + +RE+H G FE +HI+DAL H FATR+ NVFTIG+G+KPW+SLPK
Sbjct: 181 VMVTGGRNIGRVGQLVHRERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNKPWISLPK 240
Query: 241 GKGIKLSIIEE 251
GKG+KLSI EE
Sbjct: 241 GKGVKLSITEE 251
>gi|384492812|gb|EIE83303.1| 40S ribosomal protein S4 [Rhizopus delemar RA 99-880]
Length = 263
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/251 (72%), Positives = 214/251 (85%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH+KRL APKHWMLDKL G++APKPSSGPHK+RECLPLI+ +RNRLKYAL RE
Sbjct: 1 MARGPKKHMKRLAAPKHWMLDKLLGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +ILMQR V VDGKVRTD T+PAGFMDV+SI KT ENFRL+YD KGRF +H + DEEAK
Sbjct: 61 VQSILMQRLVKVDGKVRTDSTFPAGFMDVISIEKTGENFRLVYDVKGRFAVHRITDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ V G KG+PYI T+DGRTIRYPDPLIK NDT++ ++E KI DF+KFDVGNI
Sbjct: 121 YKLCKVKKVLIGSKGVPYITTHDGRTIRYPDPLIKTNDTVRFNIETGKIEDFVKFDVGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG + +RE+H G FE +HI+DAL H FATR+ NVFTIG+G+K W+SLPK
Sbjct: 181 VMVTGGRNIGRVGQLVHRERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNKSWISLPK 240
Query: 241 GKGIKLSIIEE 251
GKG+KLSI EE
Sbjct: 241 GKGVKLSITEE 251
>gi|307109802|gb|EFN58039.1| hypothetical protein CHLNCDRAFT_59606 [Chlorella variabilis]
Length = 261
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/254 (72%), Positives = 213/254 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPKHWMLDKLGG FAPKPS GPHK+RECLPLIL+LRNRLKYALT +E
Sbjct: 1 MARGPKKHLKRLNAPKHWMLDKLGGIFAPKPSPGPHKTRECLPLILLLRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +ILMQR V VDGKVRTDKTYP GFMDV+ IPKT+E+FRL+YD KGRF +H + EEA
Sbjct: 61 VTSILMQRLVEVDGKVRTDKTYPVGFMDVIDIPKTDEHFRLVYDAKGRFVVHRITKEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + FG+ GIP+I T+DGRT+RYPDP IK NDT+ LDLE K+ DFIKFDVGN+
Sbjct: 121 YKLCKVKRLAFGKGGIPHIGTHDGRTVRYPDPEIKVNDTVMLDLESGKVKDFIKFDVGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGG N GRVG I ++EKHKGSF+ +HI+DA GH FATR+ NVF IGKG KP +SLPK
Sbjct: 181 AMATGGHNNGRVGTIVHKEKHKGSFDIVHIKDAAGHTFATRMTNVFVIGKGDKPMISLPK 240
Query: 241 GKGIKLSIIEEARK 254
GKGI+ SI++E K
Sbjct: 241 GKGIRQSILQEQAK 254
>gi|350539629|ref|NP_001233602.1| 40S ribosomal protein S4 [Cricetulus griseus]
gi|1350996|sp|P47961.2|RS4_CRIGR RecName: Full=40S ribosomal protein S4
gi|453574|dbj|BAA05485.1| ribosomal protein S4 [Cricetulus griseus]
Length = 263
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|431892606|gb|ELK03039.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 263
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIDKTEENFRLIYDTKGRFAVHRITSEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KG+P++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGVPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F +GKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVVGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|74179765|dbj|BAE22507.1| unnamed protein product [Mus musculus]
Length = 263
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|4506725|ref|NP_000998.1| 40S ribosomal protein S4, X isoform X isoform [Homo sapiens]
gi|6677805|ref|NP_033120.1| 40S ribosomal protein S4, X isoform [Mus musculus]
gi|56090273|ref|NP_001007601.1| 40S ribosomal protein S4, X isoform [Rattus norvegicus]
gi|78369408|ref|NP_001030522.1| 40S ribosomal protein S4 [Bos taurus]
gi|255653020|ref|NP_001157422.1| 40S ribosomal protein S4 [Equus caballus]
gi|324021713|ref|NP_001191212.1| ribosomal protein S4 [Sus scrofa]
gi|354725914|ref|NP_001238971.1| 40S ribosomal protein S4, X isoform [Canis lupus familiaris]
gi|388453927|ref|NP_001252551.1| 40S ribosomal protein S4, X isoform [Macaca mulatta]
gi|114689107|ref|XP_001139217.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 3 [Pan
troglodytes]
gi|291407689|ref|XP_002720153.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 2
[Oryctolagus cuniculus]
gi|293363046|ref|XP_002730304.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Rattus
norvegicus]
gi|296235756|ref|XP_002763034.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Callithrix jacchus]
gi|332263743|ref|XP_003280912.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 1 [Nomascus
leucogenys]
gi|390479927|ref|XP_003735813.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Callithrix jacchus]
gi|392343218|ref|XP_003754823.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Rattus
norvegicus]
gi|397467181|ref|XP_003805305.1| PREDICTED: 40S ribosomal protein S4, X isoform [Pan paniscus]
gi|402910522|ref|XP_003917923.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Papio anubis]
gi|410988822|ref|XP_004000676.1| PREDICTED: 40S ribosomal protein S4, X isoform [Felis catus]
gi|426250215|ref|XP_004018833.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
gi|426257226|ref|XP_004022233.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
gi|426396382|ref|XP_004064423.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 1 [Gorilla
gorilla gorilla]
gi|426396384|ref|XP_004064424.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 2 [Gorilla
gorilla gorilla]
gi|426396386|ref|XP_004064425.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 3 [Gorilla
gorilla gorilla]
gi|50401474|sp|Q76MY1.3|RS4X_MACFU RecName: Full=40S ribosomal protein S4, X isoform
gi|50401475|sp|Q76N24.3|RS4X_CERAE RecName: Full=40S ribosomal protein S4, X isoform
gi|50403621|sp|P62703.2|RS4X_RAT RecName: Full=40S ribosomal protein S4, X isoform
gi|50403628|sp|P62701.2|RS4X_HUMAN RecName: Full=40S ribosomal protein S4, X isoform; AltName:
Full=SCR10; AltName: Full=Single copy abundant mRNA
protein
gi|50403629|sp|P62702.2|RS4X_MOUSE RecName: Full=40S ribosomal protein S4, X isoform
gi|50403630|sp|P62704.2|RS4X_MESAU RecName: Full=40S ribosomal protein S4, X isoform
gi|50403631|sp|P62705.2|RS4X_FELCA RecName: Full=40S ribosomal protein S4, X isoform
gi|118572714|sp|P79103.3|RS4_BOVIN RecName: Full=40S ribosomal protein S4
gi|1083572|pir||A55276 ribosomal protein S4 - western wild mouse
gi|2148029|pir||I48169 ribosomal protein S4 - hamster (Mesocricetus sp.)
gi|57135|emb|CAA32427.1| unnamed protein product [Rattus rattus]
gi|200864|gb|AAA40075.1| ribosomal protein S4 [Mus musculus]
gi|220321|dbj|BAA01858.1| ribosomal protein S4 [Mesocricetus sp.]
gi|337510|gb|AAA63255.1| ribosomal protein S4X isoform [Homo sapiens]
gi|2791861|gb|AAB96968.1| ribosomal protein s4 X isoform [Homo sapiens]
gi|4115718|dbj|BAA36501.1| ribosomal protein S4X [Chlorocebus aethiops]
gi|6519820|dbj|BAA87932.1| ribosomal protein S4X (RPS4X) [Macaca fuscata]
gi|12653405|gb|AAH00472.1| Ribosomal protein S4, X-linked [Homo sapiens]
gi|12832435|dbj|BAB22106.1| unnamed protein product [Mus musculus]
gi|12846290|dbj|BAB27108.1| unnamed protein product [Mus musculus]
gi|12846695|dbj|BAB27268.1| unnamed protein product [Mus musculus]
gi|14318606|gb|AAH09100.1| Ribosomal protein S4, X-linked [Mus musculus]
gi|26353416|dbj|BAC40338.1| unnamed protein product [Mus musculus]
gi|48145587|emb|CAG33016.1| RPS4X [Homo sapiens]
gi|48735278|gb|AAH71662.1| Ribosomal protein S4, X-linked [Homo sapiens]
gi|55824731|gb|AAH86560.1| Ribosomal protein S4, X-linked [Rattus norvegicus]
gi|71680222|gb|AAI00904.1| RPS4X protein [Homo sapiens]
gi|71681664|gb|AAI00905.1| RPS4X protein [Homo sapiens]
gi|74139944|dbj|BAE31810.1| unnamed protein product [Mus musculus]
gi|74267717|gb|AAI02477.1| Ribosomal protein S4, Y-linked 2 [Bos taurus]
gi|77415376|gb|AAI06153.1| Ribosomal protein S4, X-linked [Mus musculus]
gi|90075468|dbj|BAE87414.1| unnamed protein product [Macaca fascicularis]
gi|119592223|gb|EAW71817.1| ribosomal protein S4, X-linked, isoform CRA_c [Homo sapiens]
gi|123993841|gb|ABM84522.1| ribosomal protein S4, X-linked [synthetic construct]
gi|123996497|gb|ABM85850.1| ribosomal protein S4, X-linked [synthetic construct]
gi|148682180|gb|EDL14127.1| mCG116623 [Mus musculus]
gi|148745531|gb|AAI41996.1| Ribosomal protein S4, Y-linked 2 [Bos taurus]
gi|149042162|gb|EDL95869.1| rCG36441 [Rattus norvegicus]
gi|189053066|dbj|BAG34688.1| unnamed protein product [Homo sapiens]
gi|193783638|dbj|BAG53549.1| unnamed protein product [Homo sapiens]
gi|296470839|tpg|DAA12954.1| TPA: ribosomal protein S4, X-linked [Bos taurus]
gi|327239242|gb|AEA39488.1| ribosomal protein S4 X-linked [Ailuropoda melanoleuca]
gi|327239334|gb|AEA39534.1| ribosomal protein S4 X-linked [Ailuropoda melanoleuca]
gi|387542680|gb|AFJ71967.1| 40S ribosomal protein S4, X isoform X isoform [Macaca mulatta]
Length = 263
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392882228|gb|AFM89946.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 218/262 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIILLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|395862302|ref|XP_003803397.1| PREDICTED: 40S ribosomal protein S4, X isoform [Otolemur garnettii]
Length = 263
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|119592221|gb|EAW71815.1| ribosomal protein S4, X-linked, isoform CRA_a [Homo sapiens]
Length = 385
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/261 (69%), Positives = 216/261 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGI+L+I EE KR AA+ +
Sbjct: 241 GKGIRLTIAEERDKRLAAKQS 261
>gi|392884050|gb|AFM90857.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 218/262 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR++ G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRNILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|12851918|dbj|BAB29207.1| unnamed protein product [Mus musculus]
Length = 263
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH+KR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHMKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|126327259|ref|XP_001365342.1| PREDICTED: 40S ribosomal protein S4-like [Monodelphis domestica]
Length = 263
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLATHDARTIRYPDPLIKVNDTVQIDLEAGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|296212730|ref|XP_002752965.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Callithrix jacchus]
Length = 263
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALIGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR++ +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRYIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392873332|gb|AFM85498.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392873708|gb|AFM85686.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392873792|gb|AFM85728.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392874658|gb|AFM86161.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392874704|gb|AFM86184.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875138|gb|AFM86401.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875380|gb|AFM86522.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875746|gb|AFM86705.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875962|gb|AFM86813.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876190|gb|AFM86927.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876292|gb|AFM86978.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876322|gb|AFM86993.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876546|gb|AFM87105.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878526|gb|AFM88095.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878612|gb|AFM88138.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878672|gb|AFM88168.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878808|gb|AFM88236.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878934|gb|AFM88299.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879118|gb|AFM88391.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879172|gb|AFM88418.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879522|gb|AFM88593.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879718|gb|AFM88691.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880066|gb|AFM88865.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880068|gb|AFM88866.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880320|gb|AFM88992.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880570|gb|AFM89117.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880610|gb|AFM89137.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392881410|gb|AFM89537.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882084|gb|AFM89874.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882130|gb|AFM89897.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882582|gb|AFM90123.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882678|gb|AFM90171.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883756|gb|AFM90710.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883898|gb|AFM90781.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883956|gb|AFM90810.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392874404|gb|AFM86034.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDAVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|53933236|ref|NP_001005589.1| 40S ribosomal protein S4, X isoform [Danio rerio]
gi|82180997|sp|Q642H9.3|RS4X_DANRE RecName: Full=40S ribosomal protein S4, X isoform
gi|51980251|gb|AAH81584.1| Ribosomal protein S4, X-linked [Danio rerio]
Length = 263
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYP GFMDVVSI KT ENFRL+YD KGRF +H + +EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPTGFMDVVSIEKTGENFRLIYDVKGRFTVHRITNEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKF+ GN+
Sbjct: 121 YKLCKVRKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFETGNM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++D++G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDSIGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++L+I EE KR AA+ ++
Sbjct: 241 GKGVRLTIAEERDKRLAAKQSS 262
>gi|392874478|gb|AFM86071.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVRIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|402868885|ref|XP_003898513.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Papio anubis]
Length = 263
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIVVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I N+E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNKERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|62896517|dbj|BAD96199.1| ribosomal protein S4, X-linked X isoform variant [Homo sapiens]
Length = 263
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|402869907|ref|XP_003898985.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Papio anubis]
Length = 263
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
++LCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YQLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|395528794|ref|XP_003766510.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Sarcophilus
harrisii]
gi|395528796|ref|XP_003766511.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Sarcophilus
harrisii]
Length = 263
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLEAGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|348570508|ref|XP_003471039.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cavia
porcellus]
Length = 263
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|417398042|gb|JAA46054.1| Putative 40s ribosomal protein s4 [Desmodus rotundus]
Length = 263
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/259 (70%), Positives = 215/259 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI+++LE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQINLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGI+L+I EE KR AA+
Sbjct: 241 GKGIRLTIAEERDKRLAAK 259
>gi|148229573|ref|NP_001090472.1| 40S ribosomal protein S4 [Xenopus laevis]
gi|117949829|sp|P49401.4|RS4_XENLA RecName: Full=40S ribosomal protein S4
gi|77748204|gb|AAI06701.1| MGC132392 protein [Xenopus laevis]
Length = 263
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITSEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|46048780|ref|NP_990439.1| 40S ribosomal protein S4 [Gallus gallus]
gi|1350995|sp|P47836.2|RS4_CHICK RecName: Full=40S ribosomal protein S4
gi|402296|gb|AAB59946.1| ribosomal protein S4 [Gallus gallus]
Length = 263
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|327287930|ref|XP_003228681.1| PREDICTED: 40S ribosomal protein S4-like [Anolis carolinensis]
Length = 263
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|126722859|ref|NP_001075891.1| 40S ribosomal protein S4 [Bos taurus]
gi|126010823|gb|AAI33508.1| Ribosomal protein S4, Y-linked 1 [Bos taurus]
gi|296474500|tpg|DAA16615.1| TPA: ribosomal protein S4, Y-linked 1 [Bos taurus]
gi|440910374|gb|ELR60176.1| 40S ribosomal protein S4 [Bos grunniens mutus]
Length = 263
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI K ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIDKIGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|255077197|ref|XP_002502247.1| predicted protein [Micromonas sp. RCC299]
gi|226517512|gb|ACO63505.1| predicted protein [Micromonas sp. RCC299]
Length = 258
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 176/258 (68%), Positives = 215/258 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAPKHWMLDKLGG FAPKPS+GPHK+RECLPL L+LRNRLKYALTY+E
Sbjct: 1 MPRGPKKHLKRLNAPKHWMLDKLGGVFAPKPSAGPHKTRECLPLCLILRNRLKYALTYKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQR V VDGK R DK YPAGFMDVVSI KT+E+FRL+YD KGRF +H + EA+
Sbjct: 61 VTTILMQRLVKVDGKTRVDKCYPAGFMDVVSIDKTDEHFRLIYDAKGRFVVHRISSTEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV++ + G KG+P +N +DGRTIRYPDP+I +DT+ +D+ NKITD IK+D G +
Sbjct: 121 YKLCKVKTKRLGDKGVPCVNLHDGRTIRYPDPVINESDTVMVDIATNKITDHIKYDAGAL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGGRNRGRVG+I+ REKHKGS E +H++DA GHEFATR N F IG+G+KP +SLPK
Sbjct: 181 VMITGGRNRGRVGVIQRREKHKGSVEVVHVKDAGGHEFATRSSNTFVIGEGNKPMISLPK 240
Query: 241 GKGIKLSIIEEARKRQAA 258
GKG++L+I+EE +R+ A
Sbjct: 241 GKGLRLTIVEELERRKEA 258
>gi|348540605|ref|XP_003457778.1| PREDICTED: 40S ribosomal protein S4-like [Oreochromis niloticus]
Length = 263
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE +KITDFIKFD GN+
Sbjct: 121 YKLCKVKKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLESSKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392883816|gb|AFM90740.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGIKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|950115|gb|AAB01670.1| ribosomal protein S4, partial [Felis catus]
gi|440898938|gb|ELR50333.1| hypothetical protein M91_14309, partial [Bos grunniens mutus]
Length = 262
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/261 (69%), Positives = 216/261 (82%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+
Sbjct: 61 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+G
Sbjct: 181 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 240
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGI+L+I EE KR AA+ ++
Sbjct: 241 KGIRLTIAEERDKRLAAKQSS 261
>gi|45360467|ref|NP_988912.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|82186868|sp|Q6PBC4.3|RS4_XENTR RecName: Full=40S ribosomal protein S4
gi|38181707|gb|AAH59771.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|50416656|gb|AAH77671.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|89272957|emb|CAJ83152.1| ribosomal protein s4 x linked [Xenopus (Silurana) tropicalis]
Length = 263
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|301780256|ref|XP_002925549.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Ailuropoda
melanoleuca]
Length = 304
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/261 (69%), Positives = 216/261 (82%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 43 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 102
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+
Sbjct: 103 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 162
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 163 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 222
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+G
Sbjct: 223 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 282
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGI+L+I EE KR AA+ ++
Sbjct: 283 KGIRLTIAEERDKRLAAKQSS 303
>gi|392873726|gb|AFM85695.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHL+RL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLRRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|281338943|gb|EFB14527.1| hypothetical protein PANDA_015068 [Ailuropoda melanoleuca]
Length = 263
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/261 (69%), Positives = 216/261 (82%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+G
Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGI+L+I EE KR AA+ ++
Sbjct: 242 KGIRLTIAEERDKRLAAKQSS 262
>gi|392879752|gb|AFM88708.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ L+NRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLKNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392881226|gb|AFM89445.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP + T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPRLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392884008|gb|AFM90836.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFI+FD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIEFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392878524|gb|AFM88094.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNREGHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|227229|prf||1617101C ribosomal protein S4
Length = 263
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++D G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDRNGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|351701775|gb|EHB04694.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 263
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDVVSI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVVSIEKTGEHFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLASGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392882682|gb|AFM90173.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
G+GI+L+I EE KR AA+ ++
Sbjct: 241 GEGIRLAIAEERDKRLAAKQSS 262
>gi|147899358|ref|NP_001084941.1| 40S ribosomal protein S4 [Xenopus laevis]
gi|47122925|gb|AAH70591.1| MGC81176 protein [Xenopus laevis]
Length = 263
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|387018384|gb|AFJ51310.1| 40S ribosomal protein S4-like [Crotalus adamanteus]
Length = 263
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGK+RTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKIRTDITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392880372|gb|AFM89018.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLK+ALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKHALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|344281914|ref|XP_003412721.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Loxodonta
africana]
Length = 333
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/261 (69%), Positives = 216/261 (82%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 72 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 131
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+
Sbjct: 132 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 191
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 192 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 251
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+G
Sbjct: 252 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 311
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGI+L+I EE KR AA+ ++
Sbjct: 312 KGIRLTIAEERDKRLAAKQSS 332
>gi|348572544|ref|XP_003472052.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cavia
porcellus]
Length = 263
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGEHFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLASGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|350536323|ref|NP_001232240.1| putative ribosomal protein S4 [Taeniopygia guttata]
gi|197127213|gb|ACH43711.1| putative ribosomal protein S4 [Taeniopygia guttata]
Length = 263
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|395519902|ref|XP_003764080.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Sarcophilus
harrisii]
Length = 263
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + KGIP++ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392877122|gb|AFM87393.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+ RL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHLRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392878002|gb|AFM87833.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+ I KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVIGIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|432920853|ref|XP_004080003.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Oryzias
latipes]
Length = 263
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 215/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ +
Sbjct: 241 GKGIRLTIAEERDKRLAAKQGS 262
>gi|145355247|ref|XP_001421876.1| Ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144582115|gb|ABP00170.1| Ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 253
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/251 (70%), Positives = 209/251 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGG FAPKPS GPHKSRECLPL L+LRNRLKYALTY+E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGVFAPKPSPGPHKSRECLPLCLILRNRLKYALTYKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQR V VDGK+R DK YP G MDVVSI K++E+FRL+YD KGRF +H + EA+
Sbjct: 61 VTTILMQRVVKVDGKIRMDKCYPCGIMDVVSIEKSDEHFRLIYDNKGRFVVHRIEAIEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+S + G KG+P + +DGRTIRYPDPLIK D++ +D+ NKITDF+KFDVG +
Sbjct: 121 YKLCKVKSKKLGDKGVPCVGLHDGRTIRYPDPLIKEGDSVMVDIATNKITDFVKFDVGAL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG+I+ REKH GSFE +H++DA G EFATR NVF IG GSKP +SLPK
Sbjct: 181 CMITGGRNAGRVGVIQRREKHIGSFEIVHLKDAAGQEFATRATNVFAIGTGSKPMISLPK 240
Query: 241 GKGIKLSIIEE 251
GKGIKLSI++E
Sbjct: 241 GKGIKLSIVDE 251
>gi|303289433|ref|XP_003064004.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454320|gb|EEH51626.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 258
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/258 (69%), Positives = 210/258 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAP HWMLDKLGG FAPKPS GPHK RECLPL L+LRNRLKYALTY+E
Sbjct: 1 MPRGPKKHLKRLNAPSHWMLDKLGGVFAPKPSPGPHKQRECLPLCLILRNRLKYALTYKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQR V VDGK R DK YPAGFMDVVSI KT+E+FRL+YD KGRF +H + E++
Sbjct: 61 VTTILMQRLVKVDGKTRIDKCYPAGFMDVVSIDKTDEHFRLIYDQKGRFVVHRITQLESQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR+ + G KG+P +N +DGRTIRYPDP IK +DT+ +D+ N IT+ KFD G +
Sbjct: 121 YKLCKVRTKKLGDKGVPCVNLHDGRTIRYPDPEIKESDTVMVDISSNTITNHFKFDAGAL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG+I+ REKHKGSFE IH+QDA GH+FATR NVF IG+G+KP VSLPK
Sbjct: 181 AMITGGRNAGRVGVIQRREKHKGSFEIIHVQDAAGHQFATRATNVFVIGEGNKPMVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAA 258
GKGIKLSI+EE KR+ A
Sbjct: 241 GKGIKLSIVEELEKRKEA 258
>gi|392875924|gb|AFM86794.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD N+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTDNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|318037367|ref|NP_001187069.1| 40S ribosomal protein S4 [Ictalurus punctatus]
gi|50401280|sp|Q90YS0.3|RS4_ICTPU RecName: Full=40S ribosomal protein S4
gi|15294019|gb|AAK95186.1|AF402812_1 40S ribosomal protein S4 [Ictalurus punctatus]
Length = 263
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/262 (67%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + VDGKVRTD TYPAGFMDV+SI KT ENFRL+YD KGRF +H + +EEAK
Sbjct: 61 VKKICMQRFIKVDGKVRTDITYPAGFMDVISIEKTGENFRLIYDVKGRFTVHRITNEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDP+IKANDT+++DLE KIT+FIKFD GN+
Sbjct: 121 YKLCKVKKILIGTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG+K WVS+P+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKAWVSIPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|296204918|ref|XP_002749534.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Callithrix jacchus]
Length = 263
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G KKHLKR+ APKHWMLDKL G FAP+PS+ PHK RECLP+I+ LRNRLKYALT E
Sbjct: 1 MAHGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTSPHKLRECLPIIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRIKPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPQ 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|74136531|ref|NP_001028160.1| 40S ribosomal protein S4, Y isoform 1 [Monodelphis domestica]
gi|50401328|sp|O62739.3|RS4Y1_MONDO RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|3169291|gb|AAC32106.1| ribosomal protein S4 Y isoform [Monodelphis domestica]
Length = 263
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + KGIP++ T+D RTIRYPDPLIK NDT++++LE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQINLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|213409335|ref|XP_002175438.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|213409962|ref|XP_002175751.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|212003485|gb|EEB09145.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|212003798|gb|EEB09458.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
Length = 262
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 215/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MVRGPKKHLKRVAAPSHWLLDKLSGTYAPKPSPGPHKARDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQR V VDGKVRTD T+PAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK
Sbjct: 61 VKAILMQRLVKVDGKVRTDATFPAGFMDVISIEKTGEHFRLVYDIKGRFTVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDT+KL+LE NKI F+KFD ++
Sbjct: 121 YKLCKVKRVQLGAKGVPFVVTHDGRTIRYPDPLIKVNDTVKLNLENNKIESFVKFDTSSM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG++ +RE+H+GSFE +HI+DAL EFATRL NVF IG+ K W+SLPK
Sbjct: 181 VMVTGGRNMGRVGVVTHRERHEGSFEIVHIKDALDREFATRLSNVFVIGEAGKAWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A + A
Sbjct: 241 GKGVKLSIAEERDRRRALKGLA 262
>gi|443722694|gb|ELU11454.1| hypothetical protein CAPTEDRAFT_152725 [Capitella teleta]
Length = 259
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/259 (68%), Positives = 215/259 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG + HLKRL APKHWMLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALTY E
Sbjct: 1 MVRGPRMHLKRLAAPKHWMLDKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTYTE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ IL QR + VD KVRTDKTYPAGFMDV+SI +TNENFRL+YD KGRF +H + EEAK
Sbjct: 61 VMKILNQRLIKVDNKVRTDKTYPAGFMDVISIERTNENFRLIYDVKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+VR+++ G KG+P++ T+D RTIRYPDPLIK NDT+++DL KI D+IKFD GN+
Sbjct: 121 YKLCRVRALKTGPKGVPFLTTHDARTIRYPDPLIKPNDTVQVDLATGKIKDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG+I +REKH GSF+ IH++D GH FATR+ NVF IGKG++ WVSLPK
Sbjct: 181 CMITGGRNLGRVGLITHREKHPGSFDIIHVKDTTGHIFATRMSNVFVIGKGNRAWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKG+KLSI EE KR A++
Sbjct: 241 GKGVKLSIAEERDKRLASK 259
>gi|395823987|ref|XP_003785255.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Otolemur garnettii]
gi|395823989|ref|XP_003785256.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Otolemur garnettii]
Length = 263
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 215/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G K IP++ T+D RTIRYPDPLIK NDTI++DLE KITDF+KFD GN+
Sbjct: 121 YKLCKVRKIFVGTKEIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFVKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMATGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|326917220|ref|XP_003204899.1| PREDICTED: 40S ribosomal protein S4-like [Meleagris gallopavo]
Length = 263
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+ EE KR AA+ ++
Sbjct: 241 GKGIRLTNAEERDKRLAAKQSS 262
>gi|392883812|gb|AFM90738.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/258 (69%), Positives = 213/258 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CTVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAA 258
GKGI+L+I EE KR AA
Sbjct: 241 GKGIRLTIAEERDKRLAA 258
>gi|354832417|gb|AER42698.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 263
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 215/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKFD GN+
Sbjct: 121 YKLCKVKKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ +
Sbjct: 241 GKGIRLTIAEERDKRLAAKQGS 262
>gi|392876638|gb|AFM87151.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+K WVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKLWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|431838156|gb|ELK00088.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 264
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/259 (69%), Positives = 213/259 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KITDFIKFD N+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITDFIKFDTSNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGI+L+I EE KR AA+
Sbjct: 241 GKGIRLTIAEERDKRLAAK 259
>gi|392883806|gb|AFM90735.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT+E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTDEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTI YPDP+IK DT+++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIHYPDPMIKVTDTVQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|355757464|gb|EHH60989.1| Single copy abundant mRNA protein, partial [Macaca fascicularis]
Length = 263
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/261 (68%), Positives = 215/261 (82%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T D RTIRYPDPLIK NDTI++DLE KI+DFIKFD GN+
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTPDARTIRYPDPLIKVNDTIQIDLETGKISDFIKFDTGNLC 181
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+G
Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGI+L+I EE KR AA+ ++
Sbjct: 242 KGIRLTIAEERDKRLAAKQSS 262
>gi|291383207|ref|XP_002708125.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 215/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL FAP+PS+GPHK RECLPLI+ LRN+LKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTSVFAPRPSTGPHKLRECLPLIIFLRNKLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRADITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392884390|gb|AFM91027.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KIT FIKFD GN+
Sbjct: 121 YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITGFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
G+GI+L+I EE KR AA+ ++
Sbjct: 241 GRGIRLTIAEERDKRLAAKQSS 262
>gi|392875736|gb|AFM86700.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883616|gb|AFM90640.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 264
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/263 (68%), Positives = 217/263 (82%), Gaps = 1/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 -FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN
Sbjct: 121 QYKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGN 180
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP
Sbjct: 181 LCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQAAA 262
+GKGI+L+I EE KR AA+ ++
Sbjct: 241 RGKGIRLTIAEERDKRLAAKQSS 263
>gi|339521943|gb|AEJ84136.1| 40S ribosomal protein S4 X isoform [Capra hircus]
Length = 263
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHW LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWKLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D R IRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARPIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
G+GI+L+I EE KR+AA+ ++
Sbjct: 241 GRGIRLTIAEERDKRRAAKQSS 262
>gi|74136523|ref|NP_001028159.1| 40S ribosomal protein S4, X isoform [Monodelphis domestica]
gi|50401327|sp|O62738.3|RS4X_MONDO RecName: Full=40S ribosomal protein S4, X isoform
gi|3169289|gb|AAC32105.1| ribosomal protein S4 X isoform [Monodelphis domestica]
Length = 263
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/259 (69%), Positives = 212/259 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYP GFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDTTYPVGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR G K IP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKTFVGTKAIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGI+L+I EE KR AA+
Sbjct: 241 GKGIRLTIAEERDKRLAAK 259
>gi|260808562|ref|XP_002599076.1| hypothetical protein BRAFLDRAFT_81739 [Branchiostoma floridae]
gi|229284352|gb|EEN55088.1| hypothetical protein BRAFLDRAFT_81739 [Branchiostoma floridae]
Length = 264
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 210/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APKHWMLDKL G FAP+PS GPHK RECLPL L LRNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLAAPKHWMLDKLSGKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQR + VDGKVRTD+ YP+GFMDV++I KT ENFRL+YD KGRF +H + EEAK
Sbjct: 61 VKRILMQRLIKVDGKVRTDRCYPSGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR V G KGIP + T+D RTIRYPDP I+ ND++++D+ KITD IKFD GN+
Sbjct: 121 YKLCKVRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG++ NRE+H GSF+ +H++D GH FATRL N+F IG+G+KPWVSLPK
Sbjct: 181 CMVTGGRNLGRVGLVTNRERHPGSFDIVHVKDTAGHTFATRLANIFIIGRGNKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI LSI EE +R A +AA
Sbjct: 241 GKGIHLSIAEERDRRLAMKAAT 262
>gi|90820002|gb|ABD98758.1| putative ribosomal protein S4e [Graphocephala atropunctata]
Length = 263
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 218/262 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL+APK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLHAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGK+RTD YPAGFMDVV+I KT E FRL+YD KGRF +H + +EEAK
Sbjct: 61 VKKIVMQRLIKVDGKIRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITEEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDPLIK NDTI+LD+ +KITD+I+FD GN+
Sbjct: 121 YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIQLDIASSKITDYIRFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D GH FATRL NVF IGKG+KP+VSLPK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDTNGHTFATRLVNVFIIGKGTKPYVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE KR AA+AA+
Sbjct: 241 GKGVKLSIAEERDKRLAAKAAS 262
>gi|297735624|emb|CBI18118.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/244 (77%), Positives = 200/244 (81%), Gaps = 41/244 (16%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKV+ VQFGQKGIPY
Sbjct: 61 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVKGVQFGQKGIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+NTYDGRTIRYPDPLIKANDT
Sbjct: 121 LNTYDGRTIRYPDPLIKANDT--------------------------------------- 141
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
HKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPWV+LPKGKGIKLSIIEEA+KR AA
Sbjct: 142 --HKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVTLPKGKGIKLSIIEEAKKRLAA 199
Query: 259 QAAA 262
QA+A
Sbjct: 200 QASA 203
>gi|384252070|gb|EIE25547.1| ribosomal protein S4 component of cytosolic 80S ribosome and 40S
small subunit [Coccomyxa subellipsoidea C-169]
Length = 260
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/260 (70%), Positives = 212/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAP HWMLDKLGG FAPKPS GPHK RECLPL L+LRNRLKYALT +E
Sbjct: 1 MVRGPKKHLKRLNAPSHWMLDKLGGIFAPKPSPGPHKQRECLPLTLMLRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V++ILMQR V VDGKVRTD TYPAGFMDV+ I KT+E+FRL+YD+KGRF H + EEA
Sbjct: 61 VVSILMQRLVRVDGKVRTDATYPAGFMDVIDIEKTDEHFRLIYDSKGRFVTHRITKEEAG 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV Q G+ G+PYI T+DGRTIRYPDP IK NDT+ D+E KI DFIKFDVG +
Sbjct: 121 YKLLKVTRQQVGKGGVPYIATHDGRTIRYPDPDIKVNDTVMFDIETGKIKDFIKFDVGQL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG I NR+KHKGSF+ I ++D++GH+FATRL NVF IGK KP +SLPK
Sbjct: 181 VMVTGGRNVGRVGTIVNRQKHKGSFDIIVVKDSVGHQFATRLSNVFIIGKDEKPLISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG++L I++E KR AA+A
Sbjct: 241 GKGVRLDILQEQAKRDAAKA 260
>gi|328769177|gb|EGF79221.1| hypothetical protein BATDEDRAFT_35382 [Batrachochytrium
dendrobatidis JAM81]
Length = 293
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/261 (67%), Positives = 214/261 (81%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG KKHLKRLNAPKHWMLDKL G +APKPS+GPHK+RECLPLI+ +RNRL+YALT +E
Sbjct: 32 GRGPKKHLKRLNAPKHWMLDKLTGTWAPKPSAGPHKTRECLPLIVFIRNRLRYALTNQET 91
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
AI+ QR + VDGKVRTD TYPAGFMDV+SI KT ENFRL+YD KGRF +H + DEEAK+
Sbjct: 92 KAIVNQRLIKVDGKVRTDMTYPAGFMDVISIEKTGENFRLIYDVKGRFTIHRITDEEAKY 151
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR V+ GQK IPYI T+DGRTIRYPDPL+K NDT+K+D+ K T++IKFD GNI
Sbjct: 152 KLCKVRQVKIGQKAIPYIVTHDGRTIRYPDPLVKVNDTVKVDIATGKFTEYIKFDSGNIA 211
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
VTGGRN GR+G+I +REKH G FE +HI+DA+ H FATR+ NVF +G+G++ W+SLPKG
Sbjct: 212 YVTGGRNMGRIGVITHREKHHGGFEIVHIKDAVDHTFATRISNVFVVGQGNQSWISLPKG 271
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KG+KL+I EE +R+ A+
Sbjct: 272 KGVKLTISEERDRRREKLLAS 292
>gi|146285351|gb|ABQ18253.1| ribosomal protein S4e [Lygus lineolaris]
Length = 263
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 214/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG K+HLKRLNAPK WMLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKRHLKRLNAPKSWMLDKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTKDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDV++I KT E FRL+YD KGR+ +H + +EAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRYAIHRITADEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ G KGIP++ T+DGRTIRYPDPL K NDTI+LD+ NKI D I+ D GN+
Sbjct: 121 YKLCKVRKVQTGPKGIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATNKIIDIIRMDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKGSK +VS+PK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHVKDATGHTFATRLNNVFIIGKGSKAYVSIPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGIKLSI EE +R AA+AA+
Sbjct: 241 GKGIKLSIAEERDRRLAAKAAS 262
>gi|109083806|ref|XP_001094914.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Macaca mulatta]
gi|297297972|ref|XP_002805099.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Macaca mulatta]
gi|297297974|ref|XP_002805100.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Macaca mulatta]
gi|297297976|ref|XP_002805101.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 4
[Macaca mulatta]
Length = 264
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/263 (68%), Positives = 217/263 (82%), Gaps = 1/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVVAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGF-MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
V I MQR + +DGKVRTD TYPAGF MD++SI KT ENFRL+YDTKGRF +H + EEA
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFIMDIISIDKTGENFRLIYDTKGRFAVHRITPEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
K+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN
Sbjct: 121 KYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGN 180
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FAT+L N+F IGKG+KPW+SLP
Sbjct: 181 LCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATQLSNIFVIGKGNKPWISLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQAAA 262
+GKGI+L+I EE KR AA+ ++
Sbjct: 241 RGKGIRLTIAEERDKRLAAKQSS 263
>gi|296484165|tpg|DAA26280.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 262
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 215/262 (82%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENF L+YDTKGRF +H + EEAK
Sbjct: 61 V-KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAK 119
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 120 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 179
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 180 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR A+ ++
Sbjct: 240 GKGIRLTIAEERDKRLVAKQSS 261
>gi|410906839|ref|XP_003966899.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Takifugu
rubripes]
Length = 263
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 214/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DL+ KITDFIKFD N+
Sbjct: 121 YKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSNM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ A+
Sbjct: 241 GKGIRLTIAEERDKRLAAKQAS 262
>gi|296485647|tpg|DAA27762.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 213/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+ KT ENFRL+YDT GRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVIRTDKTGENFRLIYDTTGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVTGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|389608137|dbj|BAM17680.1| ribosomal protein S4 [Papilio xuthus]
gi|389610695|dbj|BAM18959.1| ribosomal protein S4 [Papilio polytes]
Length = 263
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 217/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ I+ QR + VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR+V G K +PY+ T+DGRT+RYPDPLIK ND+I+LD+ +KI DFIKF+ GN+
Sbjct: 121 YKLCKVRAVGTGPKSVPYLVTHDGRTVRYPDPLIKVNDSIQLDIATSKIMDFIKFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG I +RE+H GSF+ +HI+D+ GH FATR+ NVF IGKG+K ++SLP+
Sbjct: 181 CMITGGRNLGRVGTIVSRERHPGSFDIVHIRDSTGHTFATRMNNVFIIGKGTKAYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++L+I EE KR AA+ AA
Sbjct: 241 GKGVRLTIAEERDKRIAAKVAA 262
>gi|291400837|ref|XP_002716797.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVTAPKHWMLDKLTSVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+S+ KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISVDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ H++D G+ FAT L N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANMGRIGVITNRERHPGSFDVAHVKDVNGNSFATWLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ +
Sbjct: 241 GKGIRLTIAEERDKRLAAKQGS 262
>gi|159466042|ref|XP_001691218.1| ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158279190|gb|EDP04951.1| ribosomal protein S4 [Chlamydomonas reinhardtii]
Length = 261
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/261 (69%), Positives = 217/261 (83%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAP HWMLDKL G FAPKPS+GPHK RECLPL+L+LRNRLKYALT +E
Sbjct: 1 MVRGPKKHLKRLNAPYHWMLDKLSGIFAPKPSAGPHKQRECLPLLLILRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +ILMQR V VDGKVRTD TYP GFMDV+S+ KT+ENFRL+ DTKGRF +H + EEA
Sbjct: 61 VQSILMQRLVKVDGKVRTDHTYPTGFMDVISMEKTDENFRLVLDTKGRFVVHRISKEEAA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+VR V+FG+ G+PY+ T+DGRTIRYPDP IKAND+I LD+E KI +F+K DVG +
Sbjct: 121 YKLCRVRKVEFGKGGVPYVITHDGRTIRYPDPEIKANDSIMLDIETGKIKEFVKNDVGAL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGG N GRVG I ++EKHKGSFE +HI+DA G+ FATRL N+F IGK KP +SLPK
Sbjct: 181 VMVTGGHNAGRVGKIVHKEKHKGSFEIVHIEDAAGNRFATRLTNIFVIGKEGKPLISLPK 240
Query: 241 GKGIKLSIIEEARKR-QAAQA 260
GKGI+L+II+E +KR +A QA
Sbjct: 241 GKGIRLTIIQEQKKRYEAGQA 261
>gi|302846722|ref|XP_002954897.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
gi|300259872|gb|EFJ44096.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
Length = 261
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/261 (68%), Positives = 216/261 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAP HWMLDKL G FAPKPS+GPHK RECLPL+L+LRNRLKYALT +E
Sbjct: 1 MVRGPKKHLKRLNAPYHWMLDKLSGIFAPKPSAGPHKQRECLPLLLILRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +ILMQR V VDGKVRTD TYP GFMDV+SI KT+E+FRL+ DTKGRF +H + EEA
Sbjct: 61 VQSILMQRLVKVDGKVRTDHTYPTGFMDVISIEKTDEHFRLVLDTKGRFVVHRISKEEAA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+VR VQFG+ G+PY+ T+DGRT+RYPDP +KAND++ LD+E KI +++K DVG +
Sbjct: 121 YKLCRVRKVQFGKGGVPYVATHDGRTVRYPDPEVKANDSVMLDIETGKIKEYVKNDVGAL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGG N GRVG I ++EKHKGSFE +HI+DA G+ FATRL N+F IGK KP +SLPK
Sbjct: 181 VMVTGGHNAGRVGKIVHKEKHKGSFEIVHIEDAAGNRFATRLTNIFVIGKEGKPLISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGI+L+II+E +KR A +A
Sbjct: 241 GKGIRLTIIQEQKKRYEAASA 261
>gi|159145754|gb|ABW90414.1| putative ribosomal protein S4 [Barentsia elongata]
Length = 259
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/255 (68%), Positives = 209/255 (81%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
+KHLKRLNAPKHWMLDK+GG FAP+PS+GPHK RECLPLIL +RNRLKYALTY E I+
Sbjct: 5 RKHLKRLNAPKHWMLDKMGGNFAPRPSTGPHKLRECLPLILFIRNRLKYALTYDEAKKIM 64
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
QR V VDGKVRTD YP+GFMDV+SI +TNENFRL+YD KGRF +H + EEAK+KLCK
Sbjct: 65 NQRLVKVDGKVRTDICYPSGFMDVISIERTNENFRLVYDVKGRFAVHRISGEEAKYKLCK 124
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
VR V KG+PY+ T+D RTIRYPDPL+K NDT+++DL KI DFIKFD GN+ ++TG
Sbjct: 125 VRKVSVAPKGVPYLTTHDARTIRYPDPLVKMNDTVQVDLSTGKIKDFIKFDSGNLCLITG 184
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
GRN GRVG++ +REKH GSF+ +HI+DA+GH FATR NVF IGKG+KPW+SLPKGKG+K
Sbjct: 185 GRNTGRVGVVTHREKHPGSFDIVHIKDAVGHNFATRASNVFIIGKGNKPWISLPKGKGVK 244
Query: 246 LSIIEEARKRQAAQA 260
LSI EE +R +A
Sbjct: 245 LSIAEERDRRLMQKA 259
>gi|112984078|ref|NP_001037257.1| 40S ribosomal protein S4 [Bombyx mori]
gi|74782218|sp|Q5UAP0.1|RS4_BOMMO RecName: Full=40S ribosomal protein S4
gi|54609289|gb|AAV34860.1| ribosomal protein S4 [Bombyx mori]
Length = 263
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 215/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ I+ QR + VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ KI DFIKF+ GN+
Sbjct: 121 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+
Sbjct: 181 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ AA
Sbjct: 241 GKGIRLTIAEERDKRIAAKVAA 262
>gi|440912198|gb|ELR61790.1| hypothetical protein M91_18687, partial [Bos grunniens mutus]
Length = 278
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/259 (69%), Positives = 212/259 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLK + APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 19 MARGPKKHLKCVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 78
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 79 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 138
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 139 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 198
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SL +
Sbjct: 199 CMVTGGANLGRIGVITNRERHLGSFDVVHVKDANGNSFATRLSNIFVTGKGNKPWISLHR 258
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGI+L+I EE KR AA+
Sbjct: 259 GKGIRLTIAEERDKRLAAK 277
>gi|291239929|ref|XP_002739871.1| PREDICTED: ribosomal protein S4, X-linked-like [Saccoglossus
kowalevskii]
Length = 269
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/260 (68%), Positives = 211/260 (81%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKRLNAPKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 10 ARGPKKHLKRLNAPKHWMLDKLTGKFAPRPSTGPHKLRECLPLIIFLRNRLKYALTCDET 69
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+MQR + +DGKVRTD TYPAGFMDV++I KT ENFRL++D KGRF H + +EEAK+
Sbjct: 70 KKIVMQRLIKIDGKVRTDITYPAGFMDVITIEKTGENFRLIFDVKGRFTTHRITNEEAKY 129
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ V KG+PY+ T+D RTIRYPDPLIK NDT K+D+ KITDFIKFD GN+
Sbjct: 130 KLCKVKKVGIAPKGVPYLVTHDARTIRYPDPLIKVNDTTKVDISTGKITDFIKFDSGNVC 189
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M+TGGRN GRVG+I +RE+H GSF+ +H++D LGH FATRL NVF IGKG+KPW+SL KG
Sbjct: 190 MITGGRNLGRVGLITHRERHPGSFDIVHVKDNLGHTFATRLTNVFVIGKGNKPWISLAKG 249
Query: 242 KGIKLSIIEEARKRQAAQAA 261
KGI+L+I EE KR A + A
Sbjct: 250 KGIRLTIAEERDKRIATKQA 269
>gi|315115407|gb|ADT80676.1| ribosomal protein S4 [Euphydryas aurinia]
Length = 263
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 216/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ I+ QR + VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ +KI DFIKF+ GN+
Sbjct: 121 YKLCKVRHVGTGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATSKIMDFIKFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+
Sbjct: 181 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++L+I EE KR AA+ AA
Sbjct: 241 GKGVRLTIAEERDKRIAAKVAA 262
>gi|395546360|ref|XP_003775056.1| PREDICTED: 40S ribosomal protein S4, X isoform [Sarcophilus
harrisii]
Length = 291
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/260 (68%), Positives = 211/260 (81%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 30 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 89
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVRTD TYP GFMDV+SI KT E FRL+YDTKGRF +H + EEAK+
Sbjct: 90 KKICMQRFIKIDGKVRTDTTYPVGFMDVISIEKTGEYFRLIYDTKGRFAVHRITAEEAKY 149
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR G KGIP++ T+D RTIRYPDPLI+ NDTI++DLE KITDFIKFD GN+
Sbjct: 150 KLCKVRKTFVGTKGIPHLVTHDARTIRYPDPLIRVNDTIQIDLETGKITDFIKFDTGNLC 209
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGG N GR+G++ NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+G
Sbjct: 210 MVTGGANLGRIGVVTNREKHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPRG 269
Query: 242 KGIKLSIIEEARKRQAAQAA 261
KGI+L+I EE KR AA+
Sbjct: 270 KGIRLTIAEERDKRLAAKQC 289
>gi|296192615|ref|XP_002744145.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Callithrix jacchus]
Length = 263
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 215/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV++I K ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVITINKMGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE++ GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERYPGSFDAVHVKDANGNSFATRLPNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I E KR AA+ ++
Sbjct: 241 GKGIRLTIAEGRDKRLAAKQSS 262
>gi|452823075|gb|EME30088.1| 40S ribosomal protein S4e [Galdieria sulphuraria]
Length = 262
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/254 (70%), Positives = 211/254 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH+KRL APKHWML KLGG +AP+PSSGPHK RE LPL+L+LRNRLKYAL RE
Sbjct: 1 MPRGPKKHMKRLAAPKHWMLSKLGGIWAPRPSSGPHKLRESLPLLLILRNRLKYALNNRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+AILMQR V VDGKVRTDKT+PAGFMDV+ + +TNE FRLLYD KGRFRLH + EE K
Sbjct: 61 AVAILMQRLVKVDGKVRTDKTFPAGFMDVIELERTNETFRLLYDVKGRFRLHRITPEEGK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ Q G +GIPYI T+DGRTIRYPDP IK NDT+ LDLE K+TDF+KF+VGN+
Sbjct: 121 YKLCRVKRAQMGVRGIPYIATHDGRTIRYPDPAIKHNDTVVLDLETGKVTDFLKFEVGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGG N GRVG+I++REKH GS E IH++DA G EFAT+L NVF IGKG++P+VSLPK
Sbjct: 181 CMITGGHNIGRVGLIQHREKHPGSTEIIHVRDARGQEFATQLNNVFVIGKGNQPFVSLPK 240
Query: 241 GKGIKLSIIEEARK 254
GKGI+ SI+EE K
Sbjct: 241 GKGIRFSILEEQEK 254
>gi|91083095|ref|XP_969262.1| PREDICTED: similar to ribosomal protein S4e [Tribolium castaneum]
gi|270006993|gb|EFA03441.1| hypothetical protein TcasGA2_TC013431 [Tribolium castaneum]
Length = 261
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/260 (69%), Positives = 213/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDVV+I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITGEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KGIP++ T DGRTIRYPDP+IK NDTI+L++ +KI DFIKF+ GN+
Sbjct: 121 YKLCKVKKVQTGPKGIPFLVTRDGRTIRYPDPMIKVNDTIQLEIATSKILDFIKFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + +RE+H GSF+ +HI+DA GH FATRL NVF IGKGSKP+VSLP+
Sbjct: 181 CMITGGRNLGRVGTVVSRERHPGSFDIVHIKDANGHTFATRLNNVFIIGKGSKPYVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSIAEERDKRLAAKT 260
>gi|195022457|ref|XP_001985577.1| GH17143 [Drosophila grimshawi]
gi|193899059|gb|EDV97925.1| GH17143 [Drosophila grimshawi]
Length = 261
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/260 (68%), Positives = 213/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGGAFAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGAFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR Q G KG+P++ T+DGRTIRYPDPL+ ANDT+++D+ KITD+IKFD GN+
Sbjct: 121 YKLCKVRKTQLGAKGVPFLVTHDGRTIRYPDPLVHANDTVQVDIASGKITDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSISEERDKRLAAKT 260
>gi|355704916|gb|EHH30841.1| Single copy abundant mRNA protein, partial [Macaca mulatta]
Length = 263
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/261 (68%), Positives = 213/261 (81%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGG N GR+G+I NRE+H SF+ H +DA G+ FATRL N+F IGKG+KPW+SLP+G
Sbjct: 182 MVTGGANLGRIGVITNRERHPASFDGGHGKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGI+L+I EE KR AA+ ++
Sbjct: 242 KGIRLTIAEERDKRLAAKQSS 262
>gi|227206132|dbj|BAH57121.1| AT5G07090 [Arabidopsis thaliana]
Length = 197
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/197 (90%), Positives = 191/197 (96%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCK
Sbjct: 1 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTG
Sbjct: 61 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 120
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIK
Sbjct: 121 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 180
Query: 246 LSIIEEARKRQAAQAAA 262
L+IIEEARKR A+Q AA
Sbjct: 181 LTIIEEARKRLASQQAA 197
>gi|440901836|gb|ELR52713.1| 40S ribosomal protein S4, partial [Bos grunniens mutus]
Length = 271
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/254 (69%), Positives = 208/254 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 18 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 77
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 78 VKKICMQHFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITTEEAK 137
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 138 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 197
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SLP+
Sbjct: 198 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPR 257
Query: 241 GKGIKLSIIEEARK 254
GKGI L+I EE K
Sbjct: 258 GKGICLTIAEERDK 271
>gi|387539852|gb|AFJ70553.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 213/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++L+I EE KR AA+ ++
Sbjct: 241 GKGVRLTIAEERDKRLAAKQSS 262
>gi|196005203|ref|XP_002112468.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190584509|gb|EDV24578.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/255 (69%), Positives = 210/255 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL+APKHWMLDKL G+FAP+PS GPHK RECLPL + +RNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLHAPKHWMLDKLSGSFAPRPSCGPHKFRECLPLAIFMRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + +DGKVRTD TYPAGFMDV++I KT ENFRLLYD KGRF +H + EEA
Sbjct: 61 VKKIVKQRLIKIDGKVRTDITYPAGFMDVIAIEKTGENFRLLYDAKGRFTVHRITPEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ +Q G KGIPY T+D RTIRYPDPL+K NDTIK+DL+ KITDF+KFD GN
Sbjct: 121 YKLCKVKQLQIGAKGIPYAVTHDARTIRYPDPLVKVNDTIKVDLKSGKITDFLKFDSGNQ 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM GGRN GR+G+I +RE+H GSF+ +H++DA G+ FATRL NVF IGKG+KP+VSLP+
Sbjct: 181 VMAIGGRNMGRIGVITHRERHSGSFDIVHVKDAQGNAFATRLTNVFVIGKGTKPYVSLPR 240
Query: 241 GKGIKLSIIEEARKR 255
GKGI+L+I EE KR
Sbjct: 241 GKGIRLTIAEERDKR 255
>gi|157690730|tpe|CAL69092.1| TPA: putative 40S ribosomal protein S4 [Spadella cephaloptera]
Length = 260
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/260 (67%), Positives = 211/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG +KH+KR+ AP HWMLDKLGG +AP+PSSGPHK RECLPL L LRNRLKYALTY E
Sbjct: 1 MVRGPRKHMKRVAAPNHWMLDKLGGCYAPRPSSGPHKLRECLPLALFLRNRLKYALTYSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL QR V VDG+VRTD T+P GFMDVV + KT ENFRL+YD KGR+++H + EEA
Sbjct: 61 VKKILAQRLVKVDGRVRTDHTFPTGFMDVVQMEKTGENFRLIYDVKGRYKVHRISKEEAL 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC V+ V G KGIPY+ T DGRTIRYPDPLIK+ND IK+D+ NKITD+IKF+ GN+
Sbjct: 121 YKLCIVKKVSVGPKGIPYLTTTDGRTIRYPDPLIKSNDCIKVDIATNKITDYIKFESGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVGII +R +H GSF+ +H++DA GH FATRL +FTIGKGSKPWVSLP+
Sbjct: 181 AMVTGGRNLGRVGIIMHRGRHPGSFDIVHVKDAAGHSFATRLNYIFTIGKGSKPWVSLPE 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGI++++ EE KR AA++
Sbjct: 241 GKGIRMTVAEERDKRIAAKS 260
>gi|125979105|ref|XP_001353585.1| GA10883 [Drosophila pseudoobscura pseudoobscura]
gi|195161167|ref|XP_002021441.1| GL25330 [Drosophila persimilis]
gi|54642349|gb|EAL31098.1| GA10883 [Drosophila pseudoobscura pseudoobscura]
gi|194118554|gb|EDW40597.1| GL25330 [Drosophila persimilis]
Length = 261
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/260 (68%), Positives = 213/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGGAFAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGAFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V VDGKVRTD TYPAGFMDV+++ KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGFMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+
Sbjct: 121 YKLCKVKKNQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKGSKP++SLPK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGSKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSISEERDKRLAAKT 260
>gi|19112469|ref|NP_595677.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|26006874|sp|Q9USW5.1|RS4B_SCHPO RecName: Full=40S ribosomal protein S4-B
gi|6018736|emb|CAB57920.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 209/262 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL RE
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQR + VDGKVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H + EEAK
Sbjct: 61 VKAILMQRLIQVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LE NKI FIKFD
Sbjct: 121 YKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQ 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPK
Sbjct: 181 VMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGKSWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A + A
Sbjct: 241 GKGVKLSITEERDRRRALKGLA 262
>gi|291395508|ref|XP_002714210.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 213/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G KKH KR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MACGPKKHPKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKG F +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGCFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FAT L N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATWLSNIFVIGKGNKPWISLPQ 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|268306408|gb|ACY95325.1| ribosomal protein S4 [Manduca sexta]
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/262 (67%), Positives = 214/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ I+ QR + VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ KI DFIKF+ GN+
Sbjct: 121 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + +RE+H GSF+ +H++DA GH FATRL NVF IGKG+K ++SLP+
Sbjct: 181 CMITGGRNLGRVGTLVSRERHPGSFDIVHVRDATGHTFATRLNNVFIIGKGTKAYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++L+I EE KR AA+ A
Sbjct: 241 GKGVRLTIAEERDKRIAAKVAG 262
>gi|50403757|sp|P79183.3|RS4Y1_MACFU RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|6519826|dbj|BAA87933.1| ribosomal protein S4Y (RPS4Y) [Macaca fuscata]
Length = 263
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/262 (66%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|380815402|gb|AFE79575.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/262 (66%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++L+I EE KR A + ++
Sbjct: 241 GKGVRLTIAEERDKRLATKQSS 262
>gi|148680472|gb|EDL12419.1| mCG124430 [Mus musculus]
Length = 263
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/259 (67%), Positives = 212/259 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKR+ APKHW+LDKL G FAP PS+GPHK RECLPLI+ LRNRLKYAL E
Sbjct: 1 MTRGPKKHLKRVAAPKHWILDKLTGVFAPGPSTGPHKLRECLPLIIFLRNRLKYALNGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I +QR + +DGKVRTD TYPAGFMDV+SI K ENFRL+YDTKGRF +H + EEA+
Sbjct: 61 VKKICVQRFIKIDGKVRTDITYPAGFMDVISIDKNRENFRLIYDTKGRFAVHRITLEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+DGRTIRYPDPLIK NDTI++DLE K+TDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDGRTIRYPDPLIKVNDTIQIDLETGKVTDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDASGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKG++L+I EE KR AA+
Sbjct: 241 GKGVRLTIAEERDKRLAAK 259
>gi|380815398|gb|AFE79573.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/262 (66%), Positives = 213/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+
Sbjct: 121 YKLCKVRKITMGMKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++L+I EE KR AA+ ++
Sbjct: 241 GKGVRLTIAEERDKRLAAKQSS 262
>gi|146413813|ref|XP_001482877.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
gi|146392576|gb|EDK40734.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
Length = 262
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/261 (68%), Positives = 214/261 (81%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ HV VDGKVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQEHVKVDGKVRTDSTFPAGFMDVITLEATNEHFRLVYDVKGRFAVHRITAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G++GIPY+ T+DGRT+RYPDPLI+ANDT+K+DLE KI+DFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKRGIPYVVTHDGRTLRYPDPLIRANDTVKIDLESGKISDFIKFDTGAL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRVGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFVIGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSISEERDRRRAQQG 261
>gi|195377379|ref|XP_002047468.1| GJ13462 [Drosophila virilis]
gi|194154626|gb|EDW69810.1| GJ13462 [Drosophila virilis]
Length = 261
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/260 (68%), Positives = 212/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR Q G KG+P++ T+DGRTIRYPDPL+ ANDT+++D+ KITD+IKFD GN+
Sbjct: 121 YKLCKVRKTQLGAKGVPFLVTHDGRTIRYPDPLVHANDTVQVDIATGKITDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSISEERDKRLAAKT 260
>gi|19113142|ref|NP_596350.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|6094182|sp|P87158.2|RS4A_SCHPO RecName: Full=40S ribosomal protein S4-A
gi|3150141|emb|CAA19128.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 209/262 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL RE
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQR + VDGKVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H + EEAK
Sbjct: 61 VKAILMQRLIKVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LE NKI FIKFD
Sbjct: 121 YKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQ 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPK
Sbjct: 181 VMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A + A
Sbjct: 241 GKGVKLSITEERDRRRALKGLA 262
>gi|195128197|ref|XP_002008552.1| GI11752 [Drosophila mojavensis]
gi|193920161|gb|EDW19028.1| GI11752 [Drosophila mojavensis]
Length = 261
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/260 (68%), Positives = 212/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+
Sbjct: 121 YKLCKVRKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPK
Sbjct: 181 CMITGGRNLGRVGSVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSISEERDKRLAAKT 260
>gi|209733632|gb|ACI67685.1| 40S ribosomal protein S4 [Salmo salar]
gi|209736494|gb|ACI69116.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 214/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA+
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+
Sbjct: 121 YKLCKVKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+A +
Sbjct: 241 GKGIRLTIAEERDKRIAAKAGS 262
>gi|225716876|gb|ACO14284.1| 40S ribosomal protein S4, X isoform [Esox lucius]
Length = 263
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 214/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H + EEA+
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + G KG+P++ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+
Sbjct: 121 YKLCKVKKLLVGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNLFATRLGNIFIIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+A +
Sbjct: 241 GKGIRLTIAEERDKRIAAKAGS 262
>gi|124300793|dbj|BAF45892.1| ribosomal protein S4 [Solea senegalensis]
Length = 263
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 213/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKH MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHGMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEYFRLIYDVKGRFTVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE KIT+FIKFD GN+
Sbjct: 121 YKLCKVKKLLVGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLETGKITEFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ +
Sbjct: 241 GKGIRLTIAEERDKRLAAKQGS 262
>gi|70909489|emb|CAJ17169.1| ribosomal protein S4e [Sphaerius sp. APV-2005]
Length = 262
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/261 (69%), Positives = 215/261 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDVV+I KT+E FRL+YD KGRF +H + EEAK
Sbjct: 61 VKKIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTSEFFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ G +GIP++ T+DGRTIRYPDP+IK NDTI+L++ +KI D IKF+ GN+
Sbjct: 121 YKLCKVRKVQTGPRGIPFLVTHDGRTIRYPDPVIKVNDTIQLEIATSKIMDSIKFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKGSK +VSLP+
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHIFATRLNNVFIIGKGSKAYVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE KR AA+AA
Sbjct: 241 GKGVKLSIAEERDKRLAAKAA 261
>gi|254573092|ref|XP_002493655.1| 40S ribosomal protein S4 [Komagataella pastoris GS115]
gi|238033454|emb|CAY71476.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328354517|emb|CCA40914.1| 40S ribosomal protein S4 [Komagataella pastoris CBS 7435]
Length = 282
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/260 (68%), Positives = 211/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVQVDGKVRTDATFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDP IK ND+IK+DL KI DF+KFDVG +
Sbjct: 121 YKLGKVKKVQLGKKGIPYLVTHDGRTIRYPDPDIKVNDSIKIDLATGKILDFVKFDVGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL ++F TRL NVF IG+ + P +SLPK
Sbjct: 181 VMVTGGRNLGRVGVITHREKHEGGFDLVHIKDALENQFVTRLSNVFIIGEANAPIISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKLSI EE +R+ Q
Sbjct: 241 GKGIKLSIAEERDQRRQQQG 260
>gi|295792254|gb|ADG29131.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 262
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/259 (67%), Positives = 211/259 (81%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIA 63
G KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 3 GPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKK 62
Query: 64 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 123
I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KL
Sbjct: 63 ICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKL 122
Query: 124 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
CKV+ + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKFD GN+ MV
Sbjct: 123 CKVKKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMV 182
Query: 184 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 243
TGG N GR+G+I NRE H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKG
Sbjct: 183 TGGANLGRIGVITNREXHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKG 242
Query: 244 IKLSIIEEARKRQAAQAAA 262
I+L+I EE KR AA+ +
Sbjct: 243 IRLTIAEERDKRLAAKQGS 261
>gi|74844658|sp|Q95V34.1|RS4_SPOFR RecName: Full=40S ribosomal protein S4
gi|16566725|gb|AAL26580.1|AF429978_1 ribosomal protein S4 [Spodoptera frugiperda]
Length = 263
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 215/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ I+ QR + VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ V G K +P++ T+DGRTIRYPDPLIK ND+++LD+ +KI DFIKF+ GN+
Sbjct: 121 YKLCKVKRVSTGPKNVPFLVTHDGRTIRYPDPLIKVNDSVQLDIATSKIMDFIKFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+
Sbjct: 181 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++L+I EE KR AA+ A
Sbjct: 241 GKGVRLTIAEERDKRIAAKVAG 262
>gi|45187482|ref|NP_983705.1| 40S ribosomal protein S4 [Ashbya gossypii ATCC 10895]
gi|44982220|gb|AAS51529.1| ADL391Cp [Ashbya gossypii ATCC 10895]
gi|374106917|gb|AEY95825.1| FADL391Cp [Ashbya gossypii FDAG1]
Length = 261
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 212/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLATGKITDFIKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ +PW+SLP+
Sbjct: 181 VYVTGGRNLGRIGVITHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEQGRPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKLSI EE +R+A Q
Sbjct: 241 GKGIKLSIAEERDRRRAQQG 260
>gi|19115086|ref|NP_594174.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|26006873|sp|Q9P4W9.1|RS4C_SCHPO RecName: Full=40S ribosomal protein S4-C
gi|8247670|emb|CAB93014.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 209/262 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL RE
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQR + VDGKVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H + EEAK
Sbjct: 61 VKAILMQRLIKVDGKVRTDSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LE NKI FIKFD
Sbjct: 121 YKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQ 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPK
Sbjct: 181 VMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A + A
Sbjct: 241 GKGVKLSITEERDRRRALKGLA 262
>gi|158187698|gb|ABW23138.1| ribosomal protein rps4 [Arenicola marina]
Length = 262
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/258 (67%), Positives = 212/258 (82%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG + HLKRL+APKHWMLDKLGG FAPKPS+GPHK+RECLP+++ LRNRLKYALTY EV
Sbjct: 3 VRGRRNHLKRLHAPKHWMLDKLGGVFAPKPSTGPHKTRECLPMMIFLRNRLKYALTYTEV 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ QR + VDGKVRTDKTYP GFMDV++I KT ENFRL+YD KGRF +H + EEAK+
Sbjct: 63 KKIVNQRLIKVDGKVRTDKTYPCGFMDVITIEKTGENFRLIYDVKGRFAVHRISAEEAKY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ G KG+P++ T+DGRTIRYPDPL+K NDTI++D+ KI +FIKFD GN+
Sbjct: 123 KLCKVKKGLVGLKGVPHLVTHDGRTIRYPDPLVKVNDTIQVDIASGKIKEFIKFDSGNVC 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M+TGGRN GRVG I +RE+H GSF+ +HI+D++GH FATRL NVF IGKG KPWVSLP G
Sbjct: 183 MITGGRNLGRVGTITHRERHPGSFDVVHIKDSMGHTFATRLNNVFVIGKGLKPWVSLPGG 242
Query: 242 KGIKLSIIEEARKRQAAQ 259
+G+KL+I EE +R AA+
Sbjct: 243 RGLKLTIAEERDRRIAAK 260
>gi|320582410|gb|EFW96627.1| 40S ribosomal protein S4 [Ogataea parapolymorpha DL-1]
Length = 262
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/258 (69%), Positives = 211/258 (81%), Gaps = 1/258 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL APKHWMLDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPKHWMLDKLSGVYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDSTFPAGFMDVITLEATNENFRLIYDVKGRFAVHRITAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDP IK NDT+K+DLE KITDF+KFD G +
Sbjct: 121 YKLGKVKKVQLGKKGIPYVVTHDGRTIRYPDPAIKVNDTVKIDLETGKITDFLKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I N+E+H+G F+ +HI+DAL + F TRL NVF IG + KP+VSLP
Sbjct: 181 VMVTGGRNLGRVGVITNKERHEGGFDLVHIKDALENTFVTRLSNVFVIGAEAGKPYVSLP 240
Query: 240 KGKGIKLSIIEEARKRQA 257
KGKGIKLSI EE +R+A
Sbjct: 241 KGKGIKLSIAEERDRRRA 258
>gi|448120177|ref|XP_004203912.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
gi|359384780|emb|CCE78315.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/261 (68%), Positives = 210/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ HV VDGKVRTD TYPAGFMDV++I TNENFRL+YD KGRF +H + EE
Sbjct: 61 VKAILMQEHVKVDGKVRTDSTYPAGFMDVITIDATNENFRLIYDVKGRFAVHRITAEEGA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ V G++G+PY+ T+DGRTIRYPDPLI+ANDT+K+DL KI DF+KFD G +
Sbjct: 121 YKLGKVKKVVLGKRGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFVKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNMGRVGVITHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSISEERDRRRAQQG 261
>gi|156362157|ref|XP_001625647.1| predicted protein [Nematostella vectensis]
gi|156212490|gb|EDO33547.1| predicted protein [Nematostella vectensis]
Length = 263
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/260 (67%), Positives = 211/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH+KRLNAPKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYAL E
Sbjct: 1 MARGPKKHMKRLNAPKHWMLDKLSGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALNGEE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + +DGKVRTD TYPAGFMDVV+I KT ENFRLLYD KGRF +H + EEAK
Sbjct: 61 VKKIVKQRLIKIDGKVRTDTTYPAGFMDVVTIDKTGENFRLLYDVKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL +VR V G KG+PYI T+D RTIRYPDP IK NDT+ +D++ K+ D+IKFD GN+
Sbjct: 121 YKLGRVRRVDVGAKGVPYIVTHDARTIRYPDPNIKVNDTVVIDIKTGKVIDYIKFDTGNM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GGRN GRVG++ +REKH GSF+ +H++DA GH+FATRL N+F IGKG+KP+VSLPK
Sbjct: 181 AMVVGGRNMGRVGMVTHREKHAGSFDIVHVKDATGHQFATRLTNIFVIGKGNKPYVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG++LSI EE +R A +A
Sbjct: 241 GKGVRLSIAEERDRRIAEKA 260
>gi|363755780|ref|XP_003648106.1| hypothetical protein Ecym_7471 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892142|gb|AET41289.1| hypothetical protein Ecym_7471 [Eremothecium cymbalariae
DBVPG#7215]
Length = 261
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 209/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSQGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD TYP GFMDV+S+ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPTGFMDVISLEATNENFRLVYDVKGRFAVHRITDEEAA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G KG+PY+ T+DGRTIRYPDP +K NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKKVQLGNKGVPYVVTHDGRTIRYPDPNVKVNDTVKVDLATGKITDFIKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ +PW+SLPK
Sbjct: 181 VYVTGGRNLGRIGVITHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEQGRPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKLSI EE +R+A Q
Sbjct: 241 GKGIKLSIAEERDRRRAQQG 260
>gi|444705790|gb|ELW47180.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 263
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/262 (67%), Positives = 213/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGLFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EE K
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEVK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGI ++ T+D RTIRY DPLIK NDTI+++L+ KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGISHLVTHDARTIRYSDPLIKVNDTIQINLKTGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPW 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|344229651|gb|EGV61536.1| hypothetical protein CANTEDRAFT_124333 [Candida tenuis ATCC 10573]
gi|344232943|gb|EGV64816.1| ribosomal protein S4e [Candida tenuis ATCC 10573]
Length = 262
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 215/262 (82%), Gaps = 2/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQ+HV VDGKVRTD T+PAGFMDV+S+ TNENFRL+YDTKGRF +H + +EEA
Sbjct: 61 TKAILMQQHVKVDGKVRTDATFPAGFMDVISLEATNENFRLIYDTKGRFAVHRITNEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G++GIPY T+DGRTIRYPDP IKANDT+K+DLE KITDFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKRGIPYAVTHDGRTIRYPDPAIKANDTVKIDLETGKITDFIKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG + KP+VSLP
Sbjct: 181 VMVTGGRNLGRVGVIVHRERHEGGFDLVHIKDSLENTFVTRLSNVFVIGTEAGKPYVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQAA 261
KGKGIKLSI EE R R+ AQ+
Sbjct: 241 KGKGIKLSISEE-RDRRRAQSG 261
>gi|344232944|gb|EGV64817.1| hypothetical protein CANTEDRAFT_113586 [Candida tenuis ATCC 10573]
Length = 827
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 215/262 (82%), Gaps = 2/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQ+HV VDGKVRTD T+PAGFMDV+S+ TNENFRL+YDTKGRF +H + +EEA
Sbjct: 61 TKAILMQQHVKVDGKVRTDATFPAGFMDVISLEATNENFRLIYDTKGRFAVHRITNEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G++GIPY T+DGRTIRYPDP IKANDT+K+DLE KITDFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKRGIPYAVTHDGRTIRYPDPAIKANDTVKIDLETGKITDFIKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG + KP+VSLP
Sbjct: 181 VMVTGGRNLGRVGVIVHRERHEGGFDLVHIKDSLENTFVTRLSNVFVIGTEAGKPYVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQAA 261
KGKGIKLSI EE R R+ AQ+
Sbjct: 241 KGKGIKLSISEE-RDRRRAQSV 261
>gi|380815400|gb|AFE79574.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+
Sbjct: 121 YKLCKVRKITMGMKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR A + ++
Sbjct: 241 GKGIRLTIAEERDKRLATKQSS 262
>gi|70909487|emb|CAJ17168.1| ribosomal protein S4e [Mycetophagus quadripustulatus]
Length = 261
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/260 (69%), Positives = 211/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDVV+I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITGEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KGIP++ T DGRTIRYPDP IK NDTI+L++ +KI DFIKFD GN+
Sbjct: 121 YKLCKVKKVQTGPKGIPFLVTRDGRTIRYPDPNIKVNDTIQLEIATSKILDFIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + +RE+H GS + +H++DA GH FATRL NVF IGKGSKP+VSLP+
Sbjct: 181 CMITGGRNLGRVGTVVSRERHPGSVDIVHVKDANGHTFATRLNNVFIIGKGSKPYVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSIAEERDKRLAAKT 260
>gi|126139561|ref|XP_001386303.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
gi|126093585|gb|ABN68274.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
Length = 262
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 213/261 (81%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ+HV VDGKVRTD T+PAGFMDV+S+ TNE+FRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQQHVKVDGKVRTDSTFPAGFMDVISLEATNEHFRLIYDVKGRFAVHRITAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G++G+PY+ T+DGRT+RYPDPLI+ANDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKRGVPYVVTHDGRTLRYPDPLIRANDTVKIDLATGKITDFIKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRVGVIVHREKHEGGFDLVHIKDSLDNTFVTRLANVFVIGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSISEERDRRRAQQG 261
>gi|126273970|ref|XP_001387773.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
gi|126213643|gb|EAZ63750.1| ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
Length = 262
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 213/261 (81%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ+HV VDGKVRTD T+PAGFMDV+S+ TNE+FRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQQHVKVDGKVRTDSTFPAGFMDVISLEATNEHFRLVYDVKGRFAVHRITAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G++G+PY+ T+DGRT+RYPDPLI+ANDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKRGVPYVVTHDGRTLRYPDPLIRANDTVKIDLATGKITDFIKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRVGVIVHREKHEGGFDLVHIKDSLDNTFVTRLANVFVIGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+ Q
Sbjct: 241 KGKGIKLSISEERDRRRTQQG 261
>gi|342356395|gb|AEL28856.1| ribosomal protein S4 [Heliconius melpomene cythera]
Length = 263
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 215/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ I+ QR + VDGKVRTD TYPAGFMDV+SI KTNE FRL+YD KGRF +H + EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVISIEKTNELFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR V G K +PY+ T+DGRT+RYPDPLIK ND+++LD+ +I DFIKF+ GN+
Sbjct: 121 YKLCKVRHVGTGPKNVPYLVTHDGRTLRYPDPLIKVNDSVQLDIASARIMDFIKFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG+K ++SLP+
Sbjct: 181 CMITGGRNLGRVGTIVSRERHPGSFDIVHVRDSSGHTFATRLHNVFIIGKGTKAYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ AA
Sbjct: 241 GKGIRLTIAEERDKRIAAKQAA 262
>gi|380815404|gb|AFE79576.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+
Sbjct: 121 YKLCKVRKITMGMKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++L+I EE KR A + ++
Sbjct: 241 GKGVRLTIAEERDKRLATKQSS 262
>gi|354486732|ref|XP_003505532.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cricetulus
griseus]
gi|344254738|gb|EGW10842.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 262
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ AP+HWMLDKL G FAP+PSSGPH+ RECLPL + LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPRHWMLDKLTGVFAPRPSSGPHRLRECLPLAIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + VDGKVRTD YPAGFMDV+SI K+ ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRLIKVDGKVRTDVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR V G KGIP++ T+D RTIRYPDPLIK NDT+++ L+ KITD IKFD GN+
Sbjct: 121 YKLCKVRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQISLDTGKITDAIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ +
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSG 262
>gi|326512954|dbj|BAK03384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/261 (67%), Positives = 213/261 (81%), Gaps = 4/261 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH+KR+ AP HWMLDK+ G FAP+PS+GPHK RECLPLI++LRNRL+YALT E
Sbjct: 1 MARGPKKHMKRIAAPSHWMLDKMSGVFAPRPSAGPHKLRECLPLIILLRNRLRYALTRTE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + +DGKVRTD TYP GF DVV+I KT ENFRLL+DTKGRF + + EEAK
Sbjct: 61 VTKIVMQRLIKIDGKVRTDGTYPCGFQDVVTIDKTGENFRLLFDTKGRFVVQPISSEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ V G++GIP+I T+DGR IRYPDPLIKAND++KLDLE KITDF+KFD+G +
Sbjct: 121 YKLCKVKRVTVGKEGIPFITTHDGRNIRYPDPLIKANDSVKLDLESGKITDFVKFDIGQV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG----SKPWV 236
VMVTGGRN GRVG+I +RE+H GSF+ +HI+DA+G+ FATRLGNVF IGK +K +
Sbjct: 181 VMVTGGRNMGRVGVIVHRERHLGSFDIVHIKDAVGNTFATRLGNVFVIGKSDGKTTKALI 240
Query: 237 SLPKGKGIKLSIIEEARKRQA 257
SLPK KGIK SI+EEA R A
Sbjct: 241 SLPKAKGIKKSILEEAAARLA 261
>gi|194870273|ref|XP_001972620.1| GG15623 [Drosophila erecta]
gi|190654403|gb|EDV51646.1| GG15623 [Drosophila erecta]
Length = 261
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 212/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V VDGKVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSIAEERDKRLAAKT 260
>gi|345566169|gb|EGX49115.1| hypothetical protein AOL_s00079g69 [Arthrobotrys oligospora ATCC
24927]
Length = 258
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/258 (67%), Positives = 211/258 (81%), Gaps = 1/258 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH+KRL+AP HW+LDKL G +AP+PS GPHK R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHMKRLSAPSHWLLDKLSGTYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD T+PAGFMDV++I KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 TNAIVMQRLIQVDGKVRTDATFPAGFMDVITIEKTGEHFRLIYDTKGRFTIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ GQKGIPY+ T+D RTIRYPDP IK NDT+++DLE KI DF+ FD G I
Sbjct: 121 YKLCKVRRVQLGQKGIPYLVTHDARTIRYPDPSIKVNDTVQVDLETGKINDFVPFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+I +RE+H G F+ +HI+DA+ + FATRL NVF IG KPW+SLPK
Sbjct: 181 VMVTGGRNMGRVGVITHRERHDGGFDIVHIKDAIDNSFATRLSNVFIIGT-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAA 258
GKG+KL+I EE +R+AA
Sbjct: 240 GKGVKLTIAEERDRRRAA 257
>gi|259089395|ref|NP_001158523.1| 40S ribosomal protein S4, X isoform [Oncorhynchus mykiss]
gi|225704068|gb|ACO07880.1| 40S ribosomal protein S4, X isoform [Oncorhynchus mykiss]
Length = 263
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 213/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H + EEA+
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+
Sbjct: 121 YKLCKVKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+A +
Sbjct: 241 GKGIRLTIAEERDKRIAAKAGS 262
>gi|225703238|gb|ACO07465.1| 40S ribosomal protein S4 [Oncorhynchus mykiss]
Length = 263
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 213/262 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H + EEA+
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+
Sbjct: 121 YKLCKVKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+A +
Sbjct: 241 GKGIRLTIAEERDKRIAAKAGS 262
>gi|157819705|ref|NP_001103082.1| ribosomal protein S4, Y-linked 2 [Rattus norvegicus]
gi|149048928|gb|EDM01382.1| rCG29848 [Rattus norvegicus]
Length = 262
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ AP+HWMLDKL G FAP+PS+GPH+ RECLPL + LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPRHWMLDKLTGVFAPRPSAGPHRLRECLPLAIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + VDGKVRTD YPAGFMDV+SI K+ ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRLIKVDGKVRTDVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR V G KGIP++ T+D RTIRYPDPLIK NDT+++ L+ KITD IKFD GN+
Sbjct: 121 YKLCKVRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQISLDSGKITDAIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+GII NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGIITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ +
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSG 262
>gi|354544187|emb|CCE40910.1| hypothetical protein CPAR2_109480 [Candida parapsilosis]
Length = 264
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/261 (68%), Positives = 211/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +APK S GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPKSSPGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ+HV VDGKVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQQHVQVDGKVRTDATFPAGFMDVITLEATNENFRLIYDVKGRFAVHRISAEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK ND++K+DL KITDF+KFD G +
Sbjct: 121 YKLGKVKRVQLGKKGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GR+G+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRIGVIVHREKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSITEERDRRRAQQG 261
>gi|222831651|ref|NP_001138538.1| 40S ribosomal protein S4, Y isoform 2 [Macaca mulatta]
gi|219880801|gb|ACL51674.1| ribosomal protein S4 Y-linked 2 [Macaca mulatta]
Length = 263
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 211/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTXVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|3724352|dbj|BAA33778.1| ribosomal protein S4 [Schizosaccharomyces pombe]
Length = 260
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/260 (68%), Positives = 208/260 (80%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV
Sbjct: 1 RGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVK 60
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
AILMQR + VDGKVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H + EEAK+K
Sbjct: 61 AILMQRLIKVDGKVRTDSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYK 120
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
LCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LE NKI FIKFD VM
Sbjct: 121 LCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVM 180
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
VTGGRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGK
Sbjct: 181 VTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGK 240
Query: 243 GIKLSIIEEARKRQAAQAAA 262
G+KLSI EE +R+A + A
Sbjct: 241 GVKLSITEERDRRRALKGLA 260
>gi|223646190|gb|ACN09853.1| 40S ribosomal protein S4 [Salmo salar]
gi|223672037|gb|ACN12200.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA+
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ G KG+P + T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+
Sbjct: 121 YKLCKVKKNLMGTKGVPALVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L I EE KR AA+A +
Sbjct: 241 GKGIRLPIAEERDKRIAAKAGS 262
>gi|74205095|dbj|BAE21004.1| unnamed protein product [Mus musculus]
gi|148678798|gb|EDL10745.1| RIKEN cDNA 1110033J19 [Mus musculus]
Length = 262
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ AP+HWMLDKL G FAP+PS+GPH+ RECLPL + LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPRHWMLDKLTGVFAPRPSAGPHRLRECLPLAIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + VDGKVRTD YPAGFMDV+SI K+ ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRLIKVDGKVRTDVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR V G KGIP++ T+D RTIRYPDPLIK NDT+++ L+ KITD IKFD GN+
Sbjct: 121 YKLCKVRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQISLDSGKITDAIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ +
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSG 262
>gi|354548249|emb|CCE44986.1| hypothetical protein CPAR2_407890 [Candida parapsilosis]
Length = 264
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/261 (68%), Positives = 211/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL G +APK S+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGTYAPKSSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ+HV VDGKVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQQHVQVDGKVRTDTTFPAGFMDVITLEATNENFRLIYDVKGRFAVHRISAEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK ND++K+DL KITDF+KFD G +
Sbjct: 121 YKLGKVKRVQLGKKGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GR+G+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRIGVIVHREKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSITEERDRRRAQQG 261
>gi|194750067|ref|XP_001957453.1| GF24027 [Drosophila ananassae]
gi|190624735|gb|EDV40259.1| GF24027 [Drosophila ananassae]
Length = 261
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/260 (67%), Positives = 212/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V VDGKVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KL+I EE KR AA+
Sbjct: 241 GKGVKLTISEERDKRLAAKT 260
>gi|195494033|ref|XP_002094667.1| RpS4 [Drosophila yakuba]
gi|194180768|gb|EDW94379.1| RpS4 [Drosophila yakuba]
Length = 261
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/260 (67%), Positives = 212/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V VDGKVRTD TYPAG+MD++++ KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDIITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSIAEERDKRLAAKT 260
>gi|68477663|ref|XP_717144.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|68477826|ref|XP_717065.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|241952448|ref|XP_002418946.1| 40S ribosomal protein S4 [Candida dubliniensis CD36]
gi|46438762|gb|EAK98088.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46438844|gb|EAK98169.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|223642285|emb|CAX44254.1| 40s ribosomal protein s4 (s7) [Candida dubliniensis CD36]
gi|238883906|gb|EEQ47544.1| 40S ribosomal protein S4 [Candida albicans WO-1]
Length = 262
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 212/261 (81%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQ+HV VDGKVRTD TYPAGFMDV+++ TNE+FRL+YD KG+F +H + EEA
Sbjct: 61 VKAIMMQQHVQVDGKVRTDTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEAA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL KI DFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRVGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSISEERDRRRAQQG 261
>gi|24663668|ref|NP_729871.1| ribosomal protein S4, isoform A [Drosophila melanogaster]
gi|24663672|ref|NP_524053.2| ribosomal protein S4, isoform B [Drosophila melanogaster]
gi|195327307|ref|XP_002030362.1| GM25394 [Drosophila sechellia]
gi|195589999|ref|XP_002084736.1| GD14426 [Drosophila simulans]
gi|76803819|sp|P41042.2|RS4_DROME RecName: Full=40S ribosomal protein S4
gi|7294504|gb|AAF49846.1| ribosomal protein S4, isoform B [Drosophila melanogaster]
gi|7294505|gb|AAF49847.1| ribosomal protein S4, isoform A [Drosophila melanogaster]
gi|40882499|gb|AAR96161.1| RE57333p [Drosophila melanogaster]
gi|194119305|gb|EDW41348.1| GM25394 [Drosophila sechellia]
gi|194196745|gb|EDX10321.1| GD14426 [Drosophila simulans]
gi|220959550|gb|ACL92318.1| RpS4-PA [synthetic construct]
Length = 261
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/260 (67%), Positives = 212/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V VDGKVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI AND++++D+ KITD+IKFD GN+
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSIAEERDKRLAAKT 260
>gi|170285559|emb|CAM34499.1| putative ribosomal protein S4 [Cotesia congregata]
Length = 262
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/260 (68%), Positives = 212/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG +KHLKRL+APK WMLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPRKHLKRLHAPKAWMLDKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + +D KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKIDSKVRTDINYPAGFMDVITIEKTGEYFRLIYDVKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ G KGIP+I T+DGRTIRYPDP+IK NDTI+L++ +KI D I+F+ GN+
Sbjct: 121 YKLCKVRKVQTGPKGIPFIVTHDGRTIRYPDPVIKVNDTIQLEIATSKILDSIRFEPGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ HI+D+ GH FATRL NVF IGKG+KP+VSLP+
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGAKPYVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKLSI EE KR AA+
Sbjct: 241 GKGIKLSIAEERDKRLAAKG 260
>gi|448111276|ref|XP_004201802.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
gi|359464791|emb|CCE88496.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/261 (68%), Positives = 209/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ HV VDGKVRTD TYPAGFMDV+SI TNE FRL+YD KGRF +H + EE
Sbjct: 61 VKAILMQEHVKVDGKVRTDSTYPAGFMDVISIDATNEYFRLIYDVKGRFAVHRITAEEGA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ V G++G+PY+ T+DGRTIRYPDPLI+ANDT+K+DL KI DF+KFD G +
Sbjct: 121 YKLGKVKKVVLGKRGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFVKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNMGRVGVITHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSISEERDRRRAQQG 261
>gi|209736960|gb|ACI69349.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA+
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ G KG+P + T+D RTIRYPDPLIK NDT+++DL KIT+ KFD GN+
Sbjct: 121 YKLCKVKKNLMGTKGVPALVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHTKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+
Sbjct: 181 CMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+A +
Sbjct: 241 GKGIRLTIAEERDKRIAAKAGS 262
>gi|74829226|sp|Q56FH2.1|RS4_LYSTE RecName: Full=40S ribosomal protein S4
gi|62083411|gb|AAX62430.1| ribosomal protein S4 [Lysiphlebus testaceipes]
Length = 262
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 211/261 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WML KLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKSWMLGKLGGVYAPRPSTGPHKLRECLPLLIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + VDGKVRTD YP GFMDVV+I KT E FRL+YD KGRF +H + +EEAK
Sbjct: 61 VTKITMQRLIKVDGKVRTDSNYPLGFMDVVTIEKTGEFFRLIYDVKGRFSIHRISNEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ G KG+P++ T+DGRT+RYPDP+IK NDTI+L++ NKI D IKFD GN+
Sbjct: 121 YKLCKVRRVQTGPKGVPFLVTHDGRTLRYPDPVIKVNDTIQLEIATNKILDSIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + +RE+H GSF+ HI+D+ GH FATR+ NVF IGKGSK +VSLP+
Sbjct: 181 CMITGGRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRMNNVFIIGKGSKAYVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE KR AA+ A
Sbjct: 241 GKGVKLSIAEERDKRLAAKGA 261
>gi|195428307|ref|XP_002062215.1| GK17425 [Drosophila willistoni]
gi|194158300|gb|EDW73201.1| GK17425 [Drosophila willistoni]
Length = 261
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 212/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V VDGKVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+
Sbjct: 121 YKLCKVKKNQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSISEERDKRLAAKT 260
>gi|344302425|gb|EGW32699.1| ribosomal protein S4 [Spathaspora passalidarum NRRL Y-27907]
Length = 262
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/261 (67%), Positives = 212/261 (81%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ+HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQQHVKVDAKVRTDSTFPAGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G++G+PY+ T+DGRTIRYPDPLIKANDT+K+DL KI+DFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKRGVPYVVTHDGRTIRYPDPLIKANDTVKIDLATGKISDFIKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRVGVIVHREKHEGGFDLVHIKDSLDNTFVTRLSNVFVIGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+ Q
Sbjct: 241 KGKGIKLSISEERDRRRTQQG 261
>gi|406606082|emb|CCH42555.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
Length = 261
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 213/261 (81%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDATFPAGFMDVITLEATNENFRLVYDVKGRFAVHRISDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ V G++G+PY+ T+DGRTIRYPDP IK NDT+K+DLE KI+DFIKFD G +
Sbjct: 121 YKLGKVKQVALGKRGVPYVVTHDGRTIRYPDPAIKINDTVKIDLESGKISDFIKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GRVG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYVTGGRNLGRVGVITHRERHEGGFDLVHIKDSLENTFVTRLQNVFVIGEPGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGIKLSI EE R R+ AQ+
Sbjct: 241 GKGIKLSISEE-RDRRRAQSG 260
>gi|57113929|ref|NP_001009024.1| 40S ribosomal protein S4, Y isoform 2 [Pan troglodytes]
gi|51316604|sp|Q6GVM7.3|RS4Y2_PANTR RecName: Full=40S ribosomal protein S4, Y isoform 2
gi|48728364|gb|AAT46348.1| RPS4Y2 [Pan troglodytes]
gi|410308434|gb|JAA32817.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
gi|410353921|gb|JAA43564.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 211/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|6321997|ref|NP_012073.1| ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae S288c]
gi|398365603|ref|NP_012679.3| Rps4ap [Saccharomyces cerevisiae S288c]
gi|338819353|sp|P0CX35.1|RS4A_YEAST RecName: Full=40S ribosomal protein S4-A; AltName: Full=RP5;
AltName: Full=S7; AltName: Full=YS6
gi|338819354|sp|P0CX36.1|RS4B_YEAST RecName: Full=40S ribosomal protein S4-B; AltName: Full=RP5;
AltName: Full=S7; AltName: Full=YS6
gi|313103666|pdb|3IZB|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|364506100|pdb|3U5C|E Chain E, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506138|pdb|3U5G|E Chain E, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|172502|gb|AAA35011.1| ribosomal protein S7 [Saccharomyces cerevisiae]
gi|172504|gb|AAA35012.1| ribosomal protein S7 [Saccharomyces cerevisiae]
gi|1015892|emb|CAA89678.1| RPS7B [Saccharomyces cerevisiae]
gi|2347176|gb|AAB68372.1| Rps7ap: Ribosomal protein S7 [Saccharomyces cerevisiae]
gi|151944148|gb|EDN62441.1| ribosomal protein S4B [Saccharomyces cerevisiae YJM789]
gi|151945211|gb|EDN63462.1| ribosomal protein S4A [Saccharomyces cerevisiae YJM789]
gi|190405978|gb|EDV09245.1| ribosomal protein S4B [Saccharomyces cerevisiae RM11-1a]
gi|190409613|gb|EDV12878.1| ribosomal protein S4A [Saccharomyces cerevisiae RM11-1a]
gi|259146964|emb|CAY80220.1| Rps4bp [Saccharomyces cerevisiae EC1118]
gi|259147610|emb|CAY80861.1| Rps4ap [Saccharomyces cerevisiae EC1118]
gi|285810109|tpg|DAA06896.1| TPA: ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae
S288c]
gi|285813032|tpg|DAA08930.1| TPA: Rps4ap [Saccharomyces cerevisiae S288c]
gi|349578755|dbj|GAA23920.1| K7_Rps4bp [Saccharomyces cerevisiae Kyokai no. 7]
gi|349579328|dbj|GAA24491.1| K7_Rps4ap [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299017|gb|EIW10112.1| Rps4bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 261
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 210/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKLSI EE +R+A Q
Sbjct: 241 GKGIKLSIAEERDRRRAQQG 260
>gi|448117738|ref|XP_004203329.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
gi|359384197|emb|CCE78901.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/261 (68%), Positives = 209/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ HV VDGKVRTD TYP GFMDV++I TNENFRL+YD KGRF +H + EE
Sbjct: 61 VKAILMQEHVKVDGKVRTDSTYPTGFMDVITIDATNENFRLIYDVKGRFAVHRITAEEGA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ V G++GIPY+ T+DGRTIRYPDPLI+ANDT+K+DL KI D++KFD G +
Sbjct: 121 YKLGKVKKVVLGKRGIPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDYVKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNMGRVGVIAHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGNEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSISEERDRRRAQQG 261
>gi|241948211|ref|XP_002416828.1| 40S ribosomal protein S4 [Candida dubliniensis CD36]
gi|223640166|emb|CAX44413.1| 40s ribosomal protein S4 (S7), putative [Candida dubliniensis CD36]
Length = 262
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 212/261 (81%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+ S+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRQSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQ+HV VDGKVRTD TYPAGFMDV+++ TNE+FRL+YD KG+F +H + EEA
Sbjct: 61 VKAIMMQQHVQVDGKVRTDTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL KI DFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRVGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSISEERDRRRAQQG 261
>gi|391331686|ref|XP_003740274.1| PREDICTED: 40S ribosomal protein S4-like [Metaseiulus occidentalis]
Length = 262
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/261 (68%), Positives = 210/261 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPK W+LDKLGG FAP+PS+GPHK RE LP+IL+LRN+LKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKSWLLDKLGGVFAPRPSAGPHKLRESLPIILILRNKLKYALTGSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + VDGKVRTD T+P GFMDVVSI KT E FR+ YD KGRF LH + EEA+
Sbjct: 61 VTKIVNQRLIKVDGKVRTDATFPTGFMDVVSIEKTGEFFRIHYDVKGRFILHRITAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ + G K IP++ +DGRTIRYPDPLIKANDT+K+D+ KI DFIKFD GN+
Sbjct: 121 YKLCRVKKMSVGPKKIPFLVLHDGRTIRYPDPLIKANDTVKVDIATGKIDDFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVGII +RE+H GSF+ +HI+D+ GH FATR +F IGKGSKPWVSLPK
Sbjct: 181 CMVTGGRNLGRVGIITSRERHPGSFDIVHIKDSSGHTFATRQSYIFVIGKGSKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE KR A + A
Sbjct: 241 GKGVKLSIAEERDKRLAVKKA 261
>gi|302687328|ref|XP_003033344.1| 40S ribosomal protein S4 [Schizophyllum commune H4-8]
gi|300107038|gb|EFI98441.1| hypothetical protein SCHCODRAFT_76052 [Schizophyllum commune H4-8]
Length = 263
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/261 (67%), Positives = 207/261 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKLGG +AP+PS GPHK RE PL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLGGTYAPRPSPGPHKLRESFPLSVFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQR + +DGKVRTD YP GFMDVVSI K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTAIVMQRLIKIDGKVRTDTNYPTGFMDVVSIEKSGEHFRLLYDVKGRFTIHRITPEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+VR V G +G+P+I T+DGRTIRYPDP IK NDT+KLDLE KITDF+KFD GNI
Sbjct: 121 YKLCRVRKVAIGARGVPHIVTHDGRTIRYPDPAIKVNDTVKLDLETGKITDFVKFDTGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGGRN GR G+I +REKH G F+ +H++DAL FATRL N+F IG+G+KPW+SLPK
Sbjct: 181 VMITGGRNMGRSGVIVHREKHIGDFDIVHVRDALDRTFATRLSNIFVIGEGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG KL+I EE R+ +AA
Sbjct: 241 GKGTKLTIAEERDVRRKQRAA 261
>gi|156542863|ref|XP_001599933.1| PREDICTED: 40S ribosomal protein S4-like [Nasonia vitripennis]
Length = 262
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 211/261 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDV++I KTNE FRL+YD KGRF +H + EAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ G KGIP++ T+DGRTIRYPDPLIK NDTI+L++ KI D I+FD GN+
Sbjct: 121 YKLCKVRRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIQLEIATGKILDSIRFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H+GSF+ HI+D+ GH FATRL NVF IGKG+KP+VSLP+
Sbjct: 181 CMITGGRNLGRVGTVVNRERHQGSFDICHIKDSQGHTFATRLHNVFIIGKGTKPYVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
G G+KL+I EE KR AA+
Sbjct: 241 GNGVKLTIAEERDKRLAAKGV 261
>gi|72533642|gb|AAI00906.1| Ribosomal protein S4, Y-linked 1 [Homo sapiens]
Length = 263
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 212/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L++ EE KR AA+ ++
Sbjct: 241 GKGIRLTVAEERDKRLAAKQSS 262
>gi|408392754|gb|EKJ72074.1| hypothetical protein FPSE_07699 [Fusarium pseudograminearum CS3096]
Length = 261
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/257 (66%), Positives = 214/257 (83%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQR V VDGKVRTD T+P+GFMDV++I KT ENFRL+YDTKGRF +H +++EEA+
Sbjct: 61 VKAILMQRLVKVDGKVRTDSTFPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQNEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 VMVTGGRNMGRVGVITHRERHDGGFNIVHVKDAIDNSFATRESNVFIIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|322701348|gb|EFY93098.1| ribosomal protein S4 [Metarhizium acridum CQMa 102]
Length = 261
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/257 (67%), Positives = 211/257 (82%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+CLPLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGTYAPKPSAGPHKLRDCLPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAILMQRLVKVDGKVRTDMTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|322705490|gb|EFY97075.1| ribosomal protein S4 [Metarhizium anisopliae ARSEF 23]
Length = 261
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/257 (67%), Positives = 211/257 (82%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+CLPLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGTYAPKPSAGPHKLRDCLPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAILMQRLVKVDGKVRTDMTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|449548320|gb|EMD39287.1| hypothetical protein CERSUDRAFT_112935 [Ceriporiopsis subvermispora
B]
Length = 263
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/260 (66%), Positives = 210/260 (80%), Gaps = 2/260 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT +E
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V++I+MQR + VDGKVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VLSIVMQRLIKVDGKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ V G KG+PYI T+DGRTIRYPDPLIK NDTIK D+E+ KI D++KFD GNI
Sbjct: 121 YKLCKVKKVAIGTKGVPYIVTHDGRTIRYPDPLIKVNDTIKFDIEQGKIADYVKFDTGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGGRN GR G+I +REKH G F+ +H++D+L FATR+ N+F IG+G KPW+SLPK
Sbjct: 181 VMITGGRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRITNIFVIGEGIKPWISLPK 240
Query: 241 GKGIKLSIIEE--ARKRQAA 258
GKG+KL+I EE R+RQ A
Sbjct: 241 GKGVKLTIAEERDVRRRQRA 260
>gi|50303511|ref|XP_451697.1| 40S ribosomal protein S4 [Kluyveromyces lactis NRRL Y-1140]
gi|49640829|emb|CAH02090.1| KLLA0B03652p [Kluyveromyces lactis]
Length = 261
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 209/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWMLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDP IK NDT+K+DL ITDFIKFD G +
Sbjct: 121 YKLAKVKKVQLGKKGIPYVVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GRVG I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ +PW+SLPK
Sbjct: 181 VYVTGGRNLGRVGTIVHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL+I EE +R+A
Sbjct: 241 GKGIKLTISEERDRRRAQHG 260
>gi|255714348|ref|XP_002553456.1| 40S ribosomal protein S4 [Lachancea thermotolerans]
gi|238934836|emb|CAR23018.1| KLTH0D17248p [Lachancea thermotolerans CBS 6340]
Length = 261
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 211/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRT+RYPDP IK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKKGVPYVVTHDGRTLRYPDPNIKVNDTVKIDLASGKITDFIKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GRVG I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ S+P++SLPK
Sbjct: 181 VYVTGGRNLGRVGSIVHRERHEGGFDLVHIKDSLDNTFVTRLNNVFVIGEPSRPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL+I EE +R+A Q
Sbjct: 241 GKGIKLTIAEERDRRRAQQG 260
>gi|448097249|ref|XP_004198623.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
gi|359380045|emb|CCE82286.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/261 (68%), Positives = 209/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ H+ VDGKVRTD TYPAGFMDV+SI TNE FRL+YD KGRF +H + EE
Sbjct: 61 VKAILMQEHIKVDGKVRTDSTYPAGFMDVISIDSTNEYFRLIYDVKGRFAVHRITAEEGA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ V G++GIPY+ T+DGRTIRYPDPLI+ANDT+K+DL KI D++KFD G +
Sbjct: 121 YKLGKVKKVVLGKRGIPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDYVKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNMGRVGVIAHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGNEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSISEERDRRRAQQG 261
>gi|448524476|ref|XP_003871516.1| Rps4a predicted ribosomal protein [Candida orthopsilosis Co 90-125]
gi|380353338|emb|CCG26094.1| Rps4a predicted ribosomal protein [Candida orthopsilosis]
Length = 264
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/261 (68%), Positives = 211/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL G +APK S+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGTYAPKSSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ+HV VDGKVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQQHVQVDGKVRTDTTFPAGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK ND++K+DL KITDF+KFD G +
Sbjct: 121 YKLGKVKKVQLGKKGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GR+G+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRIGVIVHREKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSITEERDRRRAQQG 261
>gi|342879232|gb|EGU80487.1| hypothetical protein FOXB_08947 [Fusarium oxysporum Fo5176]
Length = 261
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/257 (66%), Positives = 212/257 (82%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYP+GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAILMQRLVKVDGKVRTDSTYPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 VMVTGGRNMGRVGVITHRERHDGGFNIVHVKDAIDNSFATRESNVFVIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|410080303|ref|XP_003957732.1| hypothetical protein KAFR_0E04470 [Kazachstania africana CBS 2517]
gi|372464318|emb|CCF58597.1| hypothetical protein KAFR_0E04470 [Kazachstania africana CBS 2517]
Length = 261
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/260 (66%), Positives = 210/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAIMMQRHVKVDGKVRTDSTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KI+D+IKFD G +
Sbjct: 121 YKLGKVRKVQLGKKGVPYVVTHDGRTIRYPDPNIKINDTVKIDLATGKISDYIKFDAGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KPW+SLPK
Sbjct: 181 VYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLSNVFVIGEPGKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL+I EE +R+A Q
Sbjct: 241 GKGIKLTIAEERDRRRAQQG 260
>gi|118573852|sp|Q4GXU6.1|RS4_CARGR RecName: Full=40S ribosomal protein S4
gi|70909481|emb|CAJ17165.1| ribosomal protein S4e [Carabus granulatus]
Length = 261
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 211/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YP+GFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPSGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI+L++ +KI D IKFD GN+
Sbjct: 121 YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPIIKVNDTIQLEIANSKIMDSIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FA RL NVF IGKGSK +VSLP+
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHTFANRLNNVFIIGKGSKAYVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSIAEERDKRLAAKT 260
>gi|320163608|gb|EFW40507.1| 40S ribosomal protein S4 [Capsaspora owczarzaki ATCC 30864]
Length = 263
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 215/262 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M G KKHLKRL APKHWMLDKL G +AP+PS+GPHK RECLPLI+ LRNRLKYALT++E
Sbjct: 1 MVVGSKKHLKRLAAPKHWMLDKLTGTWAPRPSTGPHKLRECLPLIVFLRNRLKYALTHQE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL QR V VDG+VRTD TYPAGFMDV+SI K+NE FRLLYD KGRF +H + EEAK
Sbjct: 61 VKFILAQRLVKVDGRVRTDITYPAGFMDVISIEKSNEVFRLLYDVKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR V G KG+P + T+D RTIRYPDPLI AND+++++LE +I DF+KF+ GN+
Sbjct: 121 YKLCKVRQVSTGAKGVPLLVTHDARTIRYPDPLIGANDSVQVELETGRIIDFVKFETGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+T GRN GRVG+I +RE+H+G F+ +H++D+LGH FATR+GNVF IGKG+K +VSLP+
Sbjct: 181 VMITAGRNIGRVGVIVSRERHEGGFDIVHVKDSLGHSFATRIGNVFVIGKGNKSYVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++LSI EE +R A +A +
Sbjct: 241 GKGVRLSIAEERDRRIAEKAKS 262
>gi|70909479|emb|CAJ17164.1| ribosomal protein S4e [Biphyllus lunatus]
Length = 261
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/260 (68%), Positives = 211/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP++K NDTI++++ +KI DFIKFD GN+
Sbjct: 121 YKLCKVKKVQTGPKGIPFLVTHDGRTIRYPDPMVKVNDTIQVEIATSKILDFIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GS + +HI+DA GH FATRL NVF IGKG+K VSLP+
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSSDIVHIKDANGHTFATRLNNVFIIGKGNKALVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSIAEERDKRLAAKT 260
>gi|149712494|ref|XP_001498885.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Equus
caballus]
Length = 263
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 210/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKL G FAP+ S+ PHK RECLP+++ LRNRLKY LT E
Sbjct: 1 MARGPKKHLKRLRAPKQWMLDKLTGVFAPRSSTRPHKLRECLPVVIFLRNRLKYGLTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I M+R V +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMRRFVKIDGKVRTDVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKTFVGPKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLETGKITDFIKFDAGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE++ GSFE +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERYPGSFEVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE R A + ++
Sbjct: 241 GKGIRLTIAEERDVRLATKQSS 262
>gi|388452714|ref|NP_001252674.1| ribosomal protein S4, Y-linked 1 [Macaca mulatta]
gi|387539378|gb|AFJ70316.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 211/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G +AP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVYAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+
Sbjct: 121 YKLCKVRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG++L+I EE KR A + ++
Sbjct: 241 GKGVRLTIAEERDKRLATKQSS 262
>gi|4506727|ref|NP_000999.1| 40S ribosomal protein S4, Y isoform 1 [Homo sapiens]
gi|133948|sp|P22090.2|RS4Y1_HUMAN RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|7959921|gb|AAF71131.1|AF116721_111 PRO2646 [Homo sapiens]
gi|337512|gb|AAA63256.1| ribosomal protein S4Y isoform [Homo sapiens]
gi|2791859|gb|AAB96967.1| ribosomal protein s4 Y isoform [Homo sapiens]
gi|16307477|gb|AAH10286.1| Ribosomal protein S4, Y-linked 1 [Homo sapiens]
gi|119623176|gb|EAX02771.1| ribosomal protein S4, Y-linked 1, isoform CRA_b [Homo sapiens]
gi|123981388|gb|ABM82523.1| ribosomal protein S4, Y-linked 1 [synthetic construct]
gi|123996231|gb|ABM85717.1| ribosomal protein S4, Y-linked 1 [synthetic construct]
gi|158259099|dbj|BAF85508.1| unnamed protein product [Homo sapiens]
gi|227937265|gb|ACP43278.1| ribosomal protein S4 Y-linked 1 [Gorilla gorilla]
Length = 263
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 211/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L++ EE KR A + ++
Sbjct: 241 GKGIRLTVAEERDKRLATKQSS 262
>gi|302918408|ref|XP_003052651.1| 40S ribosomal protein S4 [Nectria haematococca mpVI 77-13-4]
gi|256733591|gb|EEU46938.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 261
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/261 (65%), Positives = 213/261 (81%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ILMQR V VDGKVRTD TYP+GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKSILMQRLVKVDGKVRTDSTYPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 VMVTGGRNMGRVGVITHRERHDGGFNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KL+I EE +R+A A
Sbjct: 240 GKGVKLTIAEERDRRRAYAIA 260
>gi|70909485|emb|CAJ17167.1| ribosomal protein S4e [Julodis onopordi]
Length = 261
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/260 (68%), Positives = 211/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLK ALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKCALTNAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITIEKTGEYFRLIYDVKGRFTIHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ G KG+P++ T+DGRTIRYPDP+IK NDTI+L++ +K DFIKF+ N+
Sbjct: 121 YKLCKVRKVQTGPKGVPFLVTHDGRTIRYPDPIIKVNDTIQLEIATSKFLDFIKFESNNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+DA GH FATRL NVF IGKGSK +VSLP+
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDANGHVFATRLNNVFIIGKGSKAFVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA++
Sbjct: 241 GKGVKLSIAEERDKRLAAKS 260
>gi|75029893|sp|Q4PMB3.1|RS4_IXOSC RecName: Full=40S ribosomal protein S4
gi|67083833|gb|AAY66851.1| ribosomal protein S4 [Ixodes scapularis]
Length = 262
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/260 (66%), Positives = 210/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + VDGKVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH + EEAK
Sbjct: 61 VKKIVKQRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL KI D+IKFD GN+
Sbjct: 121 YKLCRVKRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK +KP++SLP+
Sbjct: 181 CMVTGGHNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKLS+ EE +R A++
Sbjct: 241 GKGIKLSVAEERDRRLQAKS 260
>gi|410268286|gb|JAA22109.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
Length = 263
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 210/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L++ E KR A + ++
Sbjct: 241 GKGIRLTVAAERDKRLATKQSS 262
>gi|260949501|ref|XP_002619047.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
gi|238846619|gb|EEQ36083.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
Length = 262
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/261 (67%), Positives = 208/261 (79%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ HV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + EE
Sbjct: 61 VKAILMQEHVKVDGKVRTDSTYPAGFMDVITLEATNENFRLVYDIKGRFTVHRITAEEGS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ + G+K IPY+ T+DGRTIRYPDP I+ANDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKKIALGKKAIPYVVTHDGRTIRYPDPAIRANDTVKIDLATGKITDFIKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGG+N GRVG+I +REKH+G F+ +HI+DAL + F TR NVF +G + KPWVSLP
Sbjct: 181 VMVTGGKNLGRVGVIVHREKHEGGFDLVHIKDALDNTFVTRQSNVFVVGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R+A Q
Sbjct: 241 KGKGIKLSIAEERDRRRAQQG 261
>gi|164429760|ref|XP_964251.2| 40S ribosomal protein S4 [Neurospora crassa OR74A]
gi|157073608|gb|EAA35015.2| 40S ribosomal protein S4 [Neurospora crassa OR74A]
gi|336463316|gb|EGO51556.1| 40S ribosomal protein S4 [Neurospora tetrasperma FGSC 2508]
gi|350297476|gb|EGZ78453.1| 40S ribosomal protein S4 [Neurospora tetrasperma FGSC 2509]
Length = 261
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/261 (66%), Positives = 210/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G +AP+PS+GPHK REC+PLI+ +RNRLKYAL YRE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGVYAPRPSAGPHKLRECMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++DEEAK
Sbjct: 61 TKAIMMQRLIKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K++LE KI DF+KFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFVKFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F IH++DAL + FATR NVF IG KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIIHVKDALDNTFATRESNVFVIG-SEKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRANALA 260
>gi|133777261|gb|AAI00907.1| RPS4Y1 protein [Homo sapiens]
Length = 262
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/261 (65%), Positives = 211/261 (80%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+G
Sbjct: 181 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRG 240
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGI+L++ EE KR AA+ ++
Sbjct: 241 KGIRLTVAEERDKRLAAKQSS 261
>gi|367012660|ref|XP_003680830.1| 40S ribosomal protein S4 [Torulaspora delbrueckii]
gi|359748490|emb|CCE91619.1| hypothetical protein TDEL_0D00350 [Torulaspora delbrueckii]
Length = 261
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/260 (68%), Positives = 209/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSQGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD T+PAGFMDV+S+ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTFPAGFMDVISLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPYI T+DGRTIRYPDP IK ND++K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKKGIPYIVTHDGRTIRYPDPNIKINDSVKIDLASGKITDFIKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VFVTGGRNLGRIGTIIHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKLSI EE +R+A Q
Sbjct: 241 GKGIKLSIAEERDRRRAQQG 260
>gi|410308430|gb|JAA32815.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
gi|410353917|gb|JAA43562.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
Length = 263
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 210/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KI +FIKFD GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L++ E KR A + ++
Sbjct: 241 GKGIRLTVAAERDKRLATKQSS 262
>gi|410077092|ref|XP_003956128.1| hypothetical protein KAFR_0B06960 [Kazachstania africana CBS 2517]
gi|372462711|emb|CCF56993.1| hypothetical protein KAFR_0B06960 [Kazachstania africana CBS 2517]
Length = 261
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/260 (66%), Positives = 210/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAIMMQRHVKVDGKVRTDSTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KI+++IKFD G +
Sbjct: 121 YKLGKVRKVQLGKKGVPYVVTHDGRTIRYPDPNIKINDTVKIDLATGKISEYIKFDAGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KPW+SLPK
Sbjct: 181 VYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLSNVFVIGEPGKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL+I EE +R+A Q
Sbjct: 241 GKGIKLTIAEERDRRRAQQG 260
>gi|38503308|sp|Q861U8.2|RS4Y1_GORGO RecName: Full=40S ribosomal protein S4, Y isoform 1
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 211/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L++ EE KR A + ++
Sbjct: 241 GKGIRLTVAEERDKRLATKQSS 262
>gi|296470815|tpg|DAA12930.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 210/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KK LK + APKHWMLDKL G FAP+PS+GPHK RECLPLI LRNRLKYALT E
Sbjct: 1 MARGPKKPLKCVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIXFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ + +DGKVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H + +EAK
Sbjct: 61 VKKIGMQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D R IRYPDPLIK NDTI++DLE KI DFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVISNRERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|440911356|gb|ELR61037.1| hypothetical protein M91_01196, partial [Bos grunniens mutus]
Length = 269
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 210/261 (80%), Gaps = 2/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGA--FAPKPSSGPHKSRECLPLILVLRNRLKYALTY 58
MA G KKHLK ++APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT
Sbjct: 8 MAWGSKKHLKHVSAPKHWMLDKLTGVNVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTG 67
Query: 59 REVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE 118
EV I MQR +DGKV TD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EE
Sbjct: 68 DEVKKICMQRFTKIDGKVCTDITYPAGFMDVISIDKTRENFRLIYDTKGRFAVHRITPEE 127
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
AK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N TI++DLE KITDFIKFD G
Sbjct: 128 AKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTG 187
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
N+ MVTGG + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SL
Sbjct: 188 NLCMVTGGASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISL 247
Query: 239 PKGKGIKLSIIEEARKRQAAQ 259
P+GKGI L+I EE KR AA+
Sbjct: 248 PRGKGICLTIAEEREKRLAAK 268
>gi|227937267|gb|ACP43279.1| ribosomal protein S4 Y-linked 2 [Gorilla gorilla]
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 210/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLK + APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKHVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAARQSS 262
>gi|358422345|ref|XP_003585334.1| PREDICTED: 40S ribosomal protein S4-like [Bos taurus]
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 210/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KK LK + APKHWMLDKL G FAP+PS+GPHK RECLPLI LRNRLKYALT E
Sbjct: 1 MARGPKKPLKCVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLITFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ + +DGKVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H + +EAK
Sbjct: 61 VKKIGMQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D R IRYPDPLIK NDTI++DLE KI DFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVISNRERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|38503307|sp|Q861U7.2|RS4Y1_PONPY RecName: Full=40S ribosomal protein S4, Y isoform 1
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 210/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF + + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KI +FIKFD GN+
Sbjct: 121 YKLCKVRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR A + ++
Sbjct: 241 GKGIRLTIAEERDKRLATKQSS 262
>gi|50550587|ref|XP_502766.1| 40S ribosomal protein S4 [Yarrowia lipolytica]
gi|6094184|sp|O59950.1|RS4_YARLI RecName: Full=40S ribosomal protein S4; AltName: Full=S7
gi|2997729|gb|AAC08586.1| ribosomal protein S7 [Yarrowia lipolytica]
gi|49648634|emb|CAG80954.1| YALI0D12903p [Yarrowia lipolytica CLIB122]
Length = 260
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/259 (68%), Positives = 209/259 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+ S+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRSSAGPHKLRESLPLVIFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQR V VDGKVRTD T+PAGFMDV+ + KT ENFRL+YD KGRF +H + DEEA
Sbjct: 61 VNAILMQRLVKVDGKVRTDSTFPAGFMDVIQLEKTGENFRLVYDVKGRFAVHRITDEEAA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK NDT+K+DL KIT F+KF+ GNI
Sbjct: 121 YKLGKVKRVQVGKKGIPYLVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM TGGRN GRVG I +RE+H+G F+ +HI+DAL ++F TRL NVF IG+G+K +SLPK
Sbjct: 181 VMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGIKLSI EE R+A Q
Sbjct: 241 GKGIKLSIAEERDARRAKQ 259
>gi|219880799|gb|ACL51673.1| ribosomal protein S4 Y-linked 1, partial [Macaca mulatta]
Length = 259
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/259 (66%), Positives = 209/259 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G +AP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVYAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+
Sbjct: 121 YKLCKVRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKG++L+I EE KR A +
Sbjct: 241 GKGVRLTIAEERDKRLATK 259
>gi|296484630|tpg|DAA26745.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 263
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/262 (66%), Positives = 209/262 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLK + APKHWMLD+L G FAP+PS+GPHK RECLPL + LRNRLKYALT E
Sbjct: 1 MARGPKKHLKYVAAPKHWMLDELTGVFAPRPSTGPHKLRECLPLFIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR +DGKV TD TYPAGFMDV+SI KT ENF L+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFTKIDGKVCTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N TI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SLP+
Sbjct: 181 CMVTGGASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI L+I EE KR AA+ ++
Sbjct: 241 GKGICLTIAEERDKRLAAKQSS 262
>gi|400596580|gb|EJP64351.1| ribosomal family S4e [Beauveria bassiana ARSEF 2860]
Length = 259
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/257 (66%), Positives = 211/257 (82%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGVYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ILMQR V VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TRSILMQRLVKVDGKVRTDMTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDF+KFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFVKFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GR+G+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+S+PK
Sbjct: 181 AMVTGGRNMGRIGVITHRERHDGGFAIVHIKDAIDNTFATRESNVFVIGQ-DKPWISIPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|62896747|dbj|BAD96314.1| ribosomal protein S4, Y-linked 1 Y isoform variant [Homo sapiens]
Length = 263
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 210/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFGVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L++ EE KR A + ++
Sbjct: 241 GKGIRLTVAEERDKRLATKQSS 262
>gi|198285663|gb|ACH85370.1| 40S ribosomal protein S4 [Salmo salar]
Length = 259
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/257 (66%), Positives = 210/257 (81%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I
Sbjct: 2 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 61
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCK
Sbjct: 62 MQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 121
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTG
Sbjct: 122 VKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTG 181
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
G N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+
Sbjct: 182 GANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIR 241
Query: 246 LSIIEEARKRQAAQAAA 262
L+I EE KR AA+A +
Sbjct: 242 LTIAEERDKRIAAKAGS 258
>gi|442755327|gb|JAA69823.1| Putative ribosomal protein s4 [Ixodes ricinus]
Length = 262
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/260 (66%), Positives = 209/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS GPHK RE LPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKSWMLDKLGGVFAPRPSPGPHKLRESLPLIIMLRNRLKYALTGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + VDGKVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH + EEAK
Sbjct: 61 VKKIVKQRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL KI D+IKFD GN+
Sbjct: 121 YKLCRVKRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK +KP++SLP+
Sbjct: 181 CMVTGGHNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKLS+ EE +R A++
Sbjct: 241 GKGIKLSVAEERDRRLQAKS 260
>gi|390600199|gb|EIN09594.1| 40S ribosomal protein S4 [Punctularia strigosozonata HHB-11173 SS5]
Length = 263
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/263 (66%), Positives = 205/263 (77%), Gaps = 2/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAP WMLDKL G +AP+PS GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLNAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLMIFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQR + VDGKVRTD TYP GFMDVV+I K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTAIVMQRLIKVDGKVRTDATYPTGFMDVVTIEKSGEHFRLLYDVKGRFTIHRITPEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR V G KG+PYI T+DGRTIRYPDP IKANDT+K D E+NKI DF+ F+ GNI
Sbjct: 121 YKLLKVRKVAVGSKGVPYIITHDGRTIRYPDPAIKANDTVKFDFEQNKIVDFVHFETGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GR G+I +REKH G F+ +H++D L FATR+ N+F IG+G KPWVSLP+
Sbjct: 181 VMVTGGRNMGRAGVIVHREKHVGGFDIVHVKDTLDRTFATRISNIFVIGEGIKPWVSLPR 240
Query: 241 GKGIKLSIIEE--ARKRQAAQAA 261
GKG KLSI EE R+RQ A A
Sbjct: 241 GKGTKLSIAEERDVRRRQRAAEA 263
>gi|264667395|gb|ACY71283.1| ribosomal protein S4 [Chrysomela tremula]
Length = 261
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 211/260 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDSNYPAGFMDVITIEKTGEFFRLIYDVKGRFAVHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ G K IP++ T+DGRT+RYPDP IK NDTI++++ +KI D+IKF+ GN+
Sbjct: 121 YKLCKVRRVQTGPKNIPFLVTHDGRTLRYPDPNIKVNDTIQMEIATSKILDYIKFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKG+K +VSLP+
Sbjct: 181 CMITGGRNLGRVGTVMNRERHPGSFDIVHVKDANGHVFATRLHNVFIIGKGAKAFVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKLSI EE KR AA+
Sbjct: 241 GKGIKLSIAEERDKRLAAKT 260
>gi|116871421|gb|ABK30794.1| ribosomal protein S4 [Branchiostoma belcheri]
Length = 264
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G FAP+PS GPHK RECLPL L LRNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLAAPNHWMLDKLSGKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQR + VDGKVRTD+ YPAGFMDV++I KT ENFRL+YD KGRF +H + EEAK
Sbjct: 61 VKRILMQRLIKVDGKVRTDRCYPAGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR V G KGIP + T+D RTIRYPDP I+ ND++++D+ KITD IKFD GN+
Sbjct: 121 YKLCKVRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG++ NRE+H GSF+ +H++D GH FATRL ++F IG+G+KPWVSLPK
Sbjct: 181 CMVTGGRNLGRVGLVTNRERHPGSFDIVHVKDTAGHTFATRLADIFIIGRGNKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI S+ + R R+ A AA
Sbjct: 241 GKGIP-SVHRKERDRRLALKAA 261
>gi|365986130|ref|XP_003669897.1| ribosomal protein S4 [Naumovozyma dairenensis CBS 421]
gi|343768666|emb|CCD24654.1| hypothetical protein NDAI_0D03400 [Naumovozyma dairenensis CBS 421]
Length = 261
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/260 (66%), Positives = 209/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPTGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITD+IKFD G +
Sbjct: 121 YKLAKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL+I EE +R+A Q
Sbjct: 241 GKGIKLTIAEERDRRRAQQG 260
>gi|346469671|gb|AEO34680.1| hypothetical protein [Amblyomma maculatum]
Length = 262
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/260 (67%), Positives = 209/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + VDGKVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH + EEAK
Sbjct: 61 VKKIVKQRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL KI D+IKFD GN+
Sbjct: 121 YKLCRVKRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GRVGII +RE+H GSF+ +H++DA GH FATRL +F IGK +KP++SLP+
Sbjct: 181 CMVTGGHNLGRVGIITSRERHPGSFDIVHVKDAQGHSFATRLNYIFVIGKSTKPYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL++ EE +R +A
Sbjct: 241 GKGIKLTVAEERDRRLQLKA 260
>gi|440853|dbj|BAA03786.1| ribosomal protein S4 [Drosophila melanogaster]
Length = 261
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/260 (66%), Positives = 210/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL+ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V V GKVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI AND++++D+ KITD+IKFD GN+
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPK
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR AA+
Sbjct: 241 GKGVKLSIAEERDKRLAAKT 260
>gi|440893161|gb|ELR46038.1| hypothetical protein M91_16118, partial [Bos grunniens mutus]
Length = 273
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/259 (67%), Positives = 207/259 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLK + APKHWMLD+L G FAP+PS+GPHK RECLPL + LRNRLKYALT E
Sbjct: 14 MARGPKKHLKYVAAPKHWMLDELTGVFAPRPSTGPHKLRECLPLFIFLRNRLKYALTGDE 73
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR +DGKV TD TYPAGFMDV+SI KT ENF L+YDTKGRF +H + EEAK
Sbjct: 74 VKKICMQRFTKIDGKVCTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAK 133
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N TI++DLE KITDFIKFD GN+
Sbjct: 134 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNL 193
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SLP+
Sbjct: 194 CMVTGGASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPR 253
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGI L+I EE KR AA+
Sbjct: 254 GKGICLTIAEERDKRLAAK 272
>gi|367042184|ref|XP_003651472.1| 40S ribosomal protein S4 [Thielavia terrestris NRRL 8126]
gi|346998734|gb|AEO65136.1| hypothetical protein THITE_2111827 [Thielavia terrestris NRRL 8126]
Length = 262
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/262 (66%), Positives = 211/262 (80%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++DEEAK
Sbjct: 61 TKAILMQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLE KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFGIVHLKDAIDNTFATRESNVFVIGS-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
G+G+KL+I EE +R+A A
Sbjct: 240 GRGVKLTIAEERDRRRAHALAG 261
>gi|366987631|ref|XP_003673582.1| hypothetical protein NCAS_0A06410 [Naumovozyma castellii CBS 4309]
gi|342299445|emb|CCC67199.1| hypothetical protein NCAS_0A06410 [Naumovozyma castellii CBS 4309]
Length = 261
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/260 (66%), Positives = 209/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPTGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITD+IKFD G +
Sbjct: 121 YKLAKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL+I EE +R+A Q
Sbjct: 241 GKGIKLTIAEERDRRRAQQG 260
>gi|336264577|ref|XP_003347065.1| 40S ribosomal protein S4 [Sordaria macrospora k-hell]
gi|380093082|emb|CCC09319.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 261
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/261 (66%), Positives = 211/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G +AP+PS+GPHK REC+PLI+ +RNRLKYAL YRE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGVYAPRPSAGPHKLRECMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV++I KT E+FRL+YDTKGRF +H ++DEEAK
Sbjct: 61 TKAIMMQRLIKVDGKVRTDITYPAGFMDVITIEKTGEHFRLIYDTKGRFTVHRIQDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K++LE KI DF+KFD G+I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFVKFDTGSI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F IH++DAL + FATR NVF IG KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIIHVKDALDNTFATRESNVFVIG-SEKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRANAIA 260
>gi|410308428|gb|JAA32814.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
gi|410353915|gb|JAA43561.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 209/262 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L++ E KR A + ++
Sbjct: 241 GKGIRLTVAAERDKRLATKQSS 262
>gi|57113861|ref|NP_001008987.1| 40S ribosomal protein S4, Y isoform 1 [Pan troglodytes]
gi|38503309|sp|Q861U9.2|RS4Y1_PANTR RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|38503310|sp|Q861V0.2|RS4Y1_PANPA RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|48728362|gb|AAT46347.1| RPS4Y [Pan troglodytes]
Length = 263
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 210/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L++ E KR A + ++
Sbjct: 241 GKGIRLTVAAERDKRLATKQSS 262
>gi|366997558|ref|XP_003678541.1| hypothetical protein NCAS_0J02250 [Naumovozyma castellii CBS 4309]
gi|342304413|emb|CCC72204.1| hypothetical protein NCAS_0J02250 [Naumovozyma castellii CBS 4309]
Length = 261
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/260 (66%), Positives = 209/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPTGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITD+IKFD G +
Sbjct: 121 YKLAKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL+I EE +R+A Q
Sbjct: 241 GKGIKLTIAEERDRRRAQQG 260
>gi|116193489|ref|XP_001222557.1| 40S ribosomal protein S4 [Chaetomium globosum CBS 148.51]
gi|88182375|gb|EAQ89843.1| 40S ribosomal protein S4 [Chaetomium globosum CBS 148.51]
Length = 262
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 211/262 (80%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G +AP+PS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGVYAPRPSAGPHKLRDCMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++DEEAK
Sbjct: 61 TKAIMMQRLVKVDGKVRTDVTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLE K TDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKATDFIKFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +H++DA+ + F TR NVF IG KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFVIG-SEKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KL+I EE +++AA A+
Sbjct: 240 GKGVKLTIAEERDRKRAATLAS 261
>gi|383862866|ref|XP_003706904.1| PREDICTED: 40S ribosomal protein S4-like [Megachile rotundata]
Length = 262
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/261 (67%), Positives = 208/261 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDV++I KT E FRL+YD KGRF H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITINKTGEFFRLIYDVKGRFTTHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDPLIK NDTI LD+ I DFI+FD GN+
Sbjct: 121 YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIHLDIATGTILDFIRFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + +RE+H GSF+ HI+D+ GH FATRL NVF IGKG+KP++SLP+
Sbjct: 181 CMITGGRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
KG+KLSI EE KR AA+
Sbjct: 241 DKGVKLSIAEERDKRLAAKGV 261
>gi|340521624|gb|EGR51858.1| hypothetical protein TRIREDRAFT_74568 [Trichoderma reesei QM6a]
Length = 259
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/257 (66%), Positives = 210/257 (81%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGLYAPKPSPGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIMMQRLVKVDAKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD GN+
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|358393591|gb|EHK42992.1| hypothetical protein TRIATDRAFT_300975 [Trichoderma atroviride IMI
206040]
Length = 259
Score = 369 bits (946), Expect = e-99, Method: Compositional matrix adjust.
Identities = 171/257 (66%), Positives = 211/257 (82%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGLYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR V VDGKVRTD TYPAG+MDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIMMQRLVKVDGKVRTDITYPAGYMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|198285597|gb|ACH85337.1| 40S ribosomal protein S4 [Salmo salar]
Length = 259
Score = 369 bits (946), Expect = e-99, Method: Compositional matrix adjust.
Identities = 172/257 (66%), Positives = 209/257 (81%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I
Sbjct: 2 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 61
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCK
Sbjct: 62 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 121
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V+ G KG+P + T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTG
Sbjct: 122 VKKNLMGTKGVPALVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTG 181
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
G N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+
Sbjct: 182 GANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIR 241
Query: 246 LSIIEEARKRQAAQAAA 262
L+I EE KR AA+A +
Sbjct: 242 LTIAEERDKRIAAKAGS 258
>gi|66517407|ref|XP_623050.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Apis mellifera]
gi|380027232|ref|XP_003697333.1| PREDICTED: 40S ribosomal protein S4-like [Apis florea]
Length = 262
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 175/261 (67%), Positives = 208/261 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDV++I KT E FRL+YD KGRF H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDANYPAGFMDVITINKTGEYFRLIYDVKGRFTTHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ KI D I+FD GN+
Sbjct: 121 YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATGKILDSIRFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + +RE+H GSF+ HI+D+ GH FATRL NVF IGKG+KP++SLP+
Sbjct: 181 CMITGGRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
KG+KLSI EE KR AA+
Sbjct: 241 DKGVKLSIAEERDKRLAAKGV 261
>gi|336368345|gb|EGN96688.1| hypothetical protein SERLA73DRAFT_184826 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381154|gb|EGO22306.1| hypothetical protein SERLADRAFT_472969 [Serpula lacrymans var.
lacrymans S7.9]
Length = 263
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/260 (66%), Positives = 206/260 (79%), Gaps = 2/260 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RECLPL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRECLPLTIFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +I+ QR + VDGKVRTD TYP GFMD +SI K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTSIVKQRLIKVDGKVRTDATYPTGFMDTISIEKSGEHFRLLYDVKGRFTIHRITAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR V G KG+P++ T+DGRTIRYPDPLIK NDTIK DLE+ KI DF+KFD GNI
Sbjct: 121 YKLLKVRKVALGAKGVPHVVTHDGRTIRYPDPLIKVNDTIKFDLEQGKIIDFVKFDTGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGGRN GR G+I +REKH G F+ +H++D+L FATR+ N+F IG+G+KPW+SLPK
Sbjct: 181 VMITGGRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRISNIFVIGEGTKPWISLPK 240
Query: 241 GKGIKLSIIEE--ARKRQAA 258
GKG KL+I EE R+RQ A
Sbjct: 241 GKGTKLTISEERDVRRRQRA 260
>gi|291407687|ref|XP_002720152.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 1
[Oryctolagus cuniculus]
Length = 255
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 210/262 (80%), Gaps = 8/262 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+ G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 --------IFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 172
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 173 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 232
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 233 GKGIRLTIAEERDKRLAAKQSS 254
>gi|367021618|ref|XP_003660094.1| hypothetical protein MYCTH_2297948 [Myceliophthora thermophila ATCC
42464]
gi|347007361|gb|AEO54849.1| hypothetical protein MYCTH_2297948 [Myceliophthora thermophila ATCC
42464]
Length = 262
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 212/262 (80%), Gaps = 2/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H +++EEAK
Sbjct: 61 TKAIMMQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQEEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLE KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG+I +RE+H G F +H++DA+ + F TR NVF IG KPWVSLPK
Sbjct: 181 AMITGGRNMGRVGVITHRERHDGGFGIVHLKDAIDNTFTTRESNVFVIGT-DKPWVSLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KL+I EE R R+ AQA A
Sbjct: 240 GKGVKLTIAEE-RDRRRAQALA 260
>gi|340720134|ref|XP_003398498.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Bombus
terrestris]
gi|340720136|ref|XP_003398499.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Bombus
terrestris]
gi|350408329|ref|XP_003488370.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Bombus
impatiens]
gi|350408333|ref|XP_003488371.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Bombus
impatiens]
Length = 262
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 176/261 (67%), Positives = 208/261 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDV++I KT E FRL+YD KGRF H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITINKTGEYFRLIYDVKGRFTTHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDPLIK NDTI LD+ KI D I+FD GN+
Sbjct: 121 YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIHLDIATGKILDSIRFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG + +RE+H GSF+ HI+D+ GH FATRL NVF IGKG+KP++SLP+
Sbjct: 181 CMITGGRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
KG+KLSI EE KR AA+
Sbjct: 241 DKGVKLSIAEERDKRLAAKGV 261
>gi|50287861|ref|XP_446360.1| 40S ribosomal protein S4 [Candida glabrata CBS 138]
gi|49525667|emb|CAG59284.1| unnamed protein product [Candida glabrata]
Length = 261
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 171/260 (65%), Positives = 210/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAIMMQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T DGRTIRYPDP IK NDT+K+DL KITD+IKFD+G +
Sbjct: 121 YKLGKVKKVQLGKKGVPYVVTDDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDIGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V +TGGRN GR+G I ++E+H G F+ +H++D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYITGGRNLGRIGTIVHKERHDGGFDLVHVKDSLDNTFVTRLNNVFVIGEQGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL+I EE +R+A Q
Sbjct: 241 GKGIKLTIAEERDRRRAQQG 260
>gi|28204681|gb|AAO37288.1| ribosomal protein S4 [Gorilla gorilla]
Length = 262
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 170/261 (65%), Positives = 210/261 (80%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+G
Sbjct: 181 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRG 240
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGI+L++ EE KR A + ++
Sbjct: 241 KGIRLTVAEERDKRLATKQSS 261
>gi|366998792|ref|XP_003684132.1| 40S ribosomal protein S4 [Tetrapisispora phaffii CBS 4417]
gi|366999745|ref|XP_003684608.1| 40S ribosomal protein S4 [Tetrapisispora phaffii CBS 4417]
gi|357522428|emb|CCE61698.1| hypothetical protein TPHA_0B00260 [Tetrapisispora phaffii CBS 4417]
gi|357522905|emb|CCE62174.1| hypothetical protein TPHA_0C00170 [Tetrapisispora phaffii CBS 4417]
Length = 261
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 176/261 (67%), Positives = 211/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAIMMQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKINDTVKIDLASGKITDFIKFDAGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGKPFISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGIKLSI EE R R+ AQ+
Sbjct: 241 GKGIKLSISEE-RDRRRAQSG 260
>gi|340975701|gb|EGS22816.1| 40S ribosomal protein S4-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 264
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 171/251 (68%), Positives = 207/251 (82%), Gaps = 1/251 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH KRL+AP HW+LDKL GA+AP+PS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGPKKHQKRLSAPSHWLLDKLSGAYAPRPSTGPHKLRDCMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H + DEEAK
Sbjct: 61 TKAIMMQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRITDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLE KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGAL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG+I +RE+H G F +H++DAL + FATR NVF IG KPW+SLPK
Sbjct: 181 AMITGGRNMGRVGVITHRERHDGGFGIVHLKDALDNTFATRESNVFVIGS-EKPWISLPK 239
Query: 241 GKGIKLSIIEE 251
GKG+KL+I EE
Sbjct: 240 GKGVKLTIAEE 250
>gi|355693324|gb|EHH27927.1| hypothetical protein EGK_18242 [Macaca mulatta]
Length = 264
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 174/263 (66%), Positives = 214/263 (81%), Gaps = 1/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+ ++GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVVAPKHWMLDKLTGVFAPRRATGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGF-MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
V I MQR + +DGKVRTD TYPAGF MD++SI KT ENFRL+YDTKGRF +H + EEA
Sbjct: 61 VKKIGMQRFIKIDGKVRTDITYPAGFIMDIISIDKTGENFRLIYDTKGRFAVHRITPEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
K+KLCKVR + G KGIP++ T+D TI +PDPLIK NDTI++DLE KITDFIKFD GN
Sbjct: 121 KYKLCKVRKIFVGTKGIPHLVTHDAHTIHHPDPLIKVNDTIQIDLETGKITDFIKFDTGN 180
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
+ MVTGG N GR+G++ NRE+H GSF+ +H++DA G+ FAT+L N+F IGKG+KPW+SLP
Sbjct: 181 LCMVTGGANLGRIGVLTNRERHPGSFDVVHVKDANGNSFATQLSNIFVIGKGNKPWISLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQAAA 262
+GKGI+L+I EE KR AA+ ++
Sbjct: 241 RGKGIRLTIAEERDKRLAAKQSS 263
>gi|28204689|gb|AAO37289.1| ribosomal protein S4 [Pongo pygmaeus]
Length = 262
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 209/261 (80%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF + + EEAK+
Sbjct: 61 KKICMQRFIKIDGKVRVDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAKY 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KI +FIKFD GN+
Sbjct: 121 KLCKVRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVC 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+G
Sbjct: 181 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRG 240
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGI+L+I EE KR A + ++
Sbjct: 241 KGIRLTIAEERDKRLATKQSS 261
>gi|237862674|gb|ACR24962.1| ribosomal protein S4 [Lepidochitona cinerea]
Length = 253
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 170/249 (68%), Positives = 206/249 (82%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG +KH+KRL APKHWMLDKLGG FAP+ S+GPHK RECLPLI+ LRNRLKYALTY EV
Sbjct: 4 RGHRKHMKRLTAPKHWMLDKLGGVFAPRASTGPHKLRECLPLIVFLRNRLKYALTYVEVK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ QR + VDGKVRTD +PAGFMDV++I KT ENFRL+YD KGRF +H ++ EEAK+K
Sbjct: 64 KIVKQRLIKVDGKVRTDMGFPAGFMDVITIEKTAENFRLIYDVKGRFTVHRIKPEEAKYK 123
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
LCKVR VQ G KG+P + T+DGRTIRYPDPL+K NDT+ LD+ +KI DFIKFD GN+ M
Sbjct: 124 LCKVRRVQTGPKGVPMLYTHDGRTIRYPDPLVKVNDTVLLDIATSKIKDFIKFDSGNLCM 183
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
+TGG N GRVG I +RE+H GSF+ +H++D+LGH FATRL VF IGKG+KPWVSLP+GK
Sbjct: 184 ITGGHNLGRVGTITHRERHPGSFDIVHVKDSLGHSFATRLSYVFIIGKGNKPWVSLPRGK 243
Query: 243 GIKLSIIEE 251
G++LSI E+
Sbjct: 244 GVRLSIAEK 252
>gi|325184655|emb|CCA19147.1| 40S ribosomal protein S4 putative [Albugo laibachii Nc14]
Length = 261
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/256 (67%), Positives = 207/256 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG +KHLKRL+APKHWML KL G +AP+PSSGPHK RECLPLI++LRNRLKYALT +E
Sbjct: 1 MPRGPRKHLKRLSAPKHWMLGKLDGVWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ+ V VDGK+R D +PAGFMD+V IPK+ + FRLLYDTKGRF LH + EE K
Sbjct: 61 VTMICMQKAVKVDGKIRVDPNFPAGFMDIVEIPKSGDQFRLLYDTKGRFVLHRVNHEEKK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV ++ +KGIPY+ T DGRTIRYPDPL+K+NDT+K+DLE KI DFIKF+ GN+
Sbjct: 121 YKLCKVIRQEYTKKGIPYVATNDGRTIRYPDPLVKSNDTVKIDLETGKIVDFIKFETGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVT GRN G VG++ E+H+GSF I+D+ GHEFATRLGNVF IG GS+PW+SLPK
Sbjct: 181 VMVTRGRNTGIVGMLHQIERHEGSFSIARIRDSTGHEFATRLGNVFAIGNGSRPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQ 256
GKGIKLSI+EE R+
Sbjct: 241 GKGIKLSILEERSVRE 256
>gi|22758868|gb|AAN05593.1| ribosomal protein S4 [Argopecten irradians]
Length = 259
Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 168/256 (65%), Positives = 208/256 (81%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
+K +KRL APK WMLDKL G FAP+PS+GPHK RECLP+I+ LRNRLKYALTY EV I+
Sbjct: 4 RKSMKRLTAPKSWMLDKLSGVFAPRPSTGPHKLRECLPMIVFLRNRLKYALTYDEVKKIV 63
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
QR + VDGKVRT K YPAGFMDV++I KTNENFRLLYD KGRF +H ++ EEAK+KLC+
Sbjct: 64 NQRLIKVDGKVRTAKDYPAGFMDVITIEKTNENFRLLYDVKGRFTVHRIKPEEAKYKLCR 123
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V+ V G KG+P + T+D RTIRYPDPL K NDTI +D+ K+ +FIKFD GN+ M+TG
Sbjct: 124 VKRVTVGAKGVPMLTTHDARTIRYPDPLAKVNDTIMVDIATGKMKEFIKFDSGNLCMITG 183
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
G N GRVG+I++RE+H GSF+ +HI+DALGH FATRL VF IGKG+KPW+SLP+GKG+K
Sbjct: 184 GHNLGRVGVIQHRERHPGSFDIVHIKDALGHTFATRLSYVFVIGKGNKPWISLPRGKGVK 243
Query: 246 LSIIEEARKRQAAQAA 261
LSI EE +R AA+++
Sbjct: 244 LSIAEERDRRMAAKSS 259
>gi|365991206|ref|XP_003672432.1| ribosomal protein S4 [Naumovozyma dairenensis CBS 421]
gi|343771207|emb|CCD27189.1| hypothetical protein NDAI_0J02970 [Naumovozyma dairenensis CBS 421]
Length = 261
Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 172/260 (66%), Positives = 208/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQRHV VDGKVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPTGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITD+IKFD G +
Sbjct: 121 YKLAKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V V GGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYVIGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL+I EE +R+A Q
Sbjct: 241 GKGIKLTIAEERDRRRAQQG 260
>gi|410308432|gb|JAA32816.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
gi|410353919|gb|JAA43563.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 209/262 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L++ E KR A + ++
Sbjct: 241 GKGIRLTVAAERDKRLATKQSS 262
>gi|149239787|ref|XP_001525769.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449892|gb|EDK44148.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 264
Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/258 (68%), Positives = 208/258 (80%), Gaps = 2/258 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL GA+APK S+GPHK RE LPL++ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGAYAPKSSAGPHKLRESLPLVIFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ+HV VDGKVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQQHVQVDGKVRTDATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRISAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G++GIPY+ T+DGRTIRYPDPLIK ND++K+DL KITDF+KFD G +
Sbjct: 121 YKLGKVKKVQLGKRGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GR+G I +REKH+G F+ +HI+DAL F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNMGRIGTIVHREKHEGGFDLVHIKDALERTFVTRLNNVFVIGEEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEE-ARKRQ 256
KGKGIKLSI EE R RQ
Sbjct: 241 KGKGIKLSITEERDRARQ 258
>gi|449016469|dbj|BAM79871.1| 40S ribosomal protein S4 [Cyanidioschyzon merolae strain 10D]
Length = 257
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 170/255 (66%), Positives = 211/255 (82%), Gaps = 1/255 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWML KLGG +AP+PS+GPHK RECLPLI++LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPRHWMLAKLGGIWAPRPSAGPHKLRECLPLIIILRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ ILMQR V VDGKVRTD+T+PAGFMDV+ I KTNE FRLLYDTKGRF LH + EE K
Sbjct: 61 AMQILMQRLVRVDGKVRTDRTFPAGFMDVIHIEKTNETFRLLYDTKGRFVLHRITPEEGK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+++ Q G +GIPYI T+DGRTIRYPDPLIK +DT+ LD+E KITDF+KFD+G +
Sbjct: 121 YKLCRIKRQQLGARGIPYIVTHDGRTIRYPDPLIKVHDTVVLDIETGKITDFVKFDIGAL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGG N GRVG++++RE+H G+ E +H++DA G EFAT++ NVF IG+ K VSLP+
Sbjct: 181 CMITGGHNIGRVGVVQHRERHPGATEIVHLKDAAGREFATQISNVFVIGR-EKSLVSLPR 239
Query: 241 GKGIKLSIIEEARKR 255
GKG+KLS++EE +R
Sbjct: 240 GKGVKLSVVEERERR 254
>gi|346325391|gb|EGX94988.1| ribosomal protein S4 [Cordyceps militaris CM01]
Length = 258
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 169/257 (65%), Positives = 210/257 (81%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGVYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ILMQR + VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TRSILMQRLIKVDGKVRTDMTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL KITDF+KFD G I
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPSIKVNDTVKIDLATGKITDFVKFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GR+G+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+S+PK
Sbjct: 181 AMVTGGRNMGRIGVITHRERHDGGFAIVHIKDAIDNTFATRESNVFVIGQ-DKPWISVPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|28204665|gb|AAO37286.1| ribosomal protein S4 [Pan paniscus]
gi|28204673|gb|AAO37287.1| ribosomal protein S4 [Pan troglodytes]
Length = 262
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 170/261 (65%), Positives = 209/261 (80%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+G
Sbjct: 181 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRG 240
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
KGI+L++ E KR A + ++
Sbjct: 241 KGIRLTVAAERDKRLATKQSS 261
>gi|444320813|ref|XP_004181063.1| hypothetical protein TBLA_0E04950 [Tetrapisispora blattae CBS 6284]
gi|387514106|emb|CCH61544.1| hypothetical protein TBLA_0E04950 [Tetrapisispora blattae CBS 6284]
Length = 261
Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 175/261 (67%), Positives = 210/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH KRL+AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHQKRLSAPHHWMLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VRAIMMQRHVKVDGKVRTDITYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+K +PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKKVQLGKKSVPYVVTHDGRTIRYPDPNIKVNDTVKIDLATGKITDFIKFDAGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGIKLSI EE R R+ AQ+
Sbjct: 241 GKGIKLSISEE-RDRRRAQSG 260
>gi|358384887|gb|EHK22484.1| hypothetical protein TRIVIDRAFT_84016 [Trichoderma virens Gv29-8]
Length = 259
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 171/257 (66%), Positives = 209/257 (81%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGLYAPKPSPGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIMMQRLVKVDAKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|242211537|ref|XP_002471606.1| 40S ribosomal protein S4 [Postia placenta Mad-698-R]
gi|220729282|gb|EED83159.1| 40S ribosomal protein S4 [Postia placenta Mad-698-R]
Length = 263
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 171/260 (65%), Positives = 209/260 (80%), Gaps = 2/260 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYAL +E
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALNGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+I+ QR + VDGKVRTD TYPAGFMDV++I K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VISIVAQRLIKVDGKVRTDPTYPAGFMDVITIEKSGEHFRLLYDVKGRFTIHRITPEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR + G KG+PYI T+DGRTIRYPDPLIK NDT+K DLE++KI D++KFD GN+
Sbjct: 121 YKLLKVRKMAIGTKGVPYIVTHDGRTIRYPDPLIKVNDTVKFDLEQSKILDYVKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGGRN GR G+I +REKH G F+ +H++D+L FATR+ N+F +G+G+KPWVSLPK
Sbjct: 181 VMITGGRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRISNIFVLGEGTKPWVSLPK 240
Query: 241 GKGIKLSIIEE--ARKRQAA 258
GKGIKL+I EE R+RQ A
Sbjct: 241 GKGIKLTITEERDVRRRQRA 260
>gi|307191745|gb|EFN75187.1| 40S ribosomal protein S4 [Harpegnathos saltator]
Length = 262
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 175/261 (67%), Positives = 207/261 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQR + VDGK+RTD YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKILMQRLIKVDGKIRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ G KGIP++ T+DGRTIRYPDPLIK NDTI LD+ KI D I+FD GN+
Sbjct: 121 YKLCKVRRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIHLDIASGKILDSIRFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+T GRN GRVG + +RE+H GSF+ H++DA GH FATRL NVF IGKG+K +VSLP+
Sbjct: 181 CMITSGRNLGRVGTVVSRERHPGSFDICHVKDAQGHTFATRLNNVFIIGKGTKAYVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
KG+KLSI EE +R AA+
Sbjct: 241 DKGVKLSIAEERDRRLAAKGV 261
>gi|167045794|gb|ABZ10463.1| ribosomal protein S4, X-linked X isoform (predicted) [Callithrix
jacchus]
Length = 263
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 208/262 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+ PHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGSKKHLKRVAAPKHWMLDKLTGVFAPRPSTSPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENF L+YDTKGRF +H + EE K
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEVK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + G KGIP++ T D TIRY DPLIK NDTI++DLE KITDFI+FD GN+
Sbjct: 121 YKLCKVQKIFVGTKGIPHLVTPDAHTIRYHDPLIKVNDTIQIDLETGKITDFIRFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVT G N GR+G+I NRE+H GSF +H++DA G+ FAT+L N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTRGANLGRIGVITNRERHPGSFNVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR A+ ++
Sbjct: 241 GKGIRLTIAEERDKRLVAKQSS 262
>gi|50426545|ref|XP_461869.1| 40S ribosomal protein S4 [Debaryomyces hansenii CBS767]
gi|49657539|emb|CAG90330.1| DEHA2G07392p [Debaryomyces hansenii CBS767]
Length = 263
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 172/260 (66%), Positives = 210/260 (80%), Gaps = 1/260 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVIFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ HV VDGKVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQEHVKVDGKVRTDATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRITAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G++GIPY+ T+DGRTIRYPDPLI+AND++K+DL K+TDFI FD G +
Sbjct: 121 YKLAKVKKVQLGKRGIPYVVTHDGRTIRYPDPLIRANDSVKVDLATGKVTDFISFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF +G + KP +SLP
Sbjct: 181 VMVTGGRNMGRVGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFIVGTEAGKPHISLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQ 259
KGKGIKLSI EE +R+ Q
Sbjct: 241 KGKGIKLSISEERDRRRNQQ 260
>gi|2463335|emb|CAA75242.1| ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 268
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 185/259 (71%), Positives = 210/259 (81%), Gaps = 15/259 (5%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRY-------PDPLIKANDTIKLDLEENKITDFI 173
FKLCKVRSVQFGQKGIPY+NTY T Y P + N D +E +
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYVVPTDTYMATIATRPTSGKRHNQDRSGDQQE------L 174
Query: 174 KFDVGNIVMVTGGRNRGRVGIIKNREK--HKGSFETIHIQDALGHEFATRLGNVFTIGKG 231
+ G ++ + G R + ++++ KGSFETIH++DALGH+FATRLGNVFTIGKG
Sbjct: 175 RLHQGLMLAMCHGDWRRNTAVWCDQQQGEAKGSFETIHVEDALGHQFATRLGNVFTIGKG 234
Query: 232 SKPWVSLPKGKGIKLSIIE 250
+KPWVSLPKGKGIKLSIIE
Sbjct: 235 NKPWVSLPKGKGIKLSIIE 253
>gi|296475761|tpg|DAA17876.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 260
Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 209/262 (79%), Gaps = 3/262 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA+G KKHLK + APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MAQGPKKHLKPVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V + MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKMCMQRFIKIDGKVRTDITYPAGFMDVISIDKTRENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D R IRYPDPLIK ND I++DLE +KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARIIRYPDPLIKVNDIIQIDLETSKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW SLP
Sbjct: 181 CMVTGGAN---XGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWTSLPC 237
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI L+I EE KR AA+ ++
Sbjct: 238 GKGICLTIAEERDKRLAAKQSS 259
>gi|193610901|ref|XP_001949785.1| PREDICTED: 40S ribosomal protein S4-like [Acyrthosiphon pisum]
Length = 265
Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 211/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALTGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDV+SI KT+E+FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVISIQKTSEHFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDP IK NDTI+ D+ +KI D I+F+ GN+
Sbjct: 121 YKLCKVKKVQTGPKGVPFLTTHDGRTIRYPDPNIKVNDTIRYDIATSKILDHIRFETGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVGI+ NRE+H GSF+ +HI+DA H FATR+ NVF IGKG K ++SLP+
Sbjct: 181 CMITGGRNLGRVGIVINRERHPGSFDIVHIKDANEHIFATRMNNVFIIGKGQKNYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
KG+KL+I EE KR AA+ +
Sbjct: 241 SKGVKLTISEERDKRLAAKTKS 262
>gi|332376168|gb|AEE63224.1| unknown [Dendroctonus ponderosae]
Length = 261
Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 209/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDVV+I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR V G KGIP++ T+DGRTIRYPDP +K NDTI+L++ +KI D+IKF+ GN+
Sbjct: 121 YKLCKVRKVGTGPKGIPFLVTHDGRTIRYPDPNVKVNDTIQLEIATSKILDYIKFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+TGGRN GRVG + NRE+H GSF+ +HI+DA H FATRL NVF IGKGSK +VSLP+
Sbjct: 181 CQITGGRNLGRVGTVVNRERHPGSFDIVHIKDANEHVFATRLNNVFIIGKGSKAFVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLSI EE KR A++
Sbjct: 241 GKGVKLSIAEERDKRLASKT 260
>gi|392565330|gb|EIW58507.1| 40S ribosomal protein S4 [Trametes versicolor FP-101664 SS1]
Length = 262
Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 210/262 (80%), Gaps = 2/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT +E
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +I+ QR + VDGKVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTSIVKQRLIKVDGKVRTDSTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR V G KG+P++ T+DGRTIRYPDP IK NDT++ D+E++KITDF+KFD GN+
Sbjct: 121 YKLLKVRKVAIGNKGVPFVTTHDGRTIRYPDPAIKVNDTVRFDIEQSKITDFVKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+TGGRNRGR G+I +REKH G F+ +H++D+L FATR+ N+F IG+G+K WVSLPK
Sbjct: 181 AFITGGRNRGRAGVIVHREKHVGGFDIVHVKDSLERTFATRISNIFVIGEGTKSWVSLPK 240
Query: 241 GKGIKLSIIEE--ARKRQAAQA 260
GKG+KL+I EE R+R+AA++
Sbjct: 241 GKGLKLTIAEERDVRRRRAAES 262
>gi|332017152|gb|EGI57951.1| 40S ribosomal protein S4 [Acromyrmex echinatior]
Length = 286
Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 175/260 (67%), Positives = 208/260 (80%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV
Sbjct: 26 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEV 85
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I I+MQR + VDGK+RTD YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+
Sbjct: 86 IKIVMQRLIKVDGKIRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKY 145
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ +KI D I+FD GN+
Sbjct: 146 KLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATSKILDSIRFDSGNLC 205
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M+TGGRN GRVG + +RE+H GSF+ HI+DA GH FATRL NVF IGKG+K +VSLP+
Sbjct: 206 MITGGRNLGRVGTVVSRERHPGSFDICHIKDAQGHTFATRLNNVFIIGKGTKAYVSLPRD 265
Query: 242 KGIKLSIIEEARKRQAAQAA 261
KG+KLSI EE KR AA+
Sbjct: 266 KGVKLSIAEERDKRLAAKGV 285
>gi|326523807|dbj|BAJ93074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 173/264 (65%), Positives = 213/264 (80%), Gaps = 2/264 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDK+GG FAP+PSSGPHK RE LPL+++LR+RLKYALT +E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKMGGVFAPRPSSGPHKLRESLPLVILLRDRLKYALTRKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V VDGK RTD T+PAGFMDV+SI KTNE FRLLYDTKGRF + + EAK
Sbjct: 61 VTMIMMQRLVKVDGKTRTDNTFPAGFMDVISIEKTNETFRLLYDTKGRFAVQRITPAEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ + G KGIPY++T+DGRTIRYPDP IK +DT+K DLE KITD F++GN+
Sbjct: 121 YKLLKVKKIYTGTKGIPYLSTHDGRTIRYPDPAIKIHDTVKYDLESGKITDIAPFELGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGG N GRVG+I +RE+H GSF+ IH++DA+G +FATR+ NVF IGKG+K VSLP
Sbjct: 181 VMITGGANLGRVGVIVSRERHPGSFDIIHVKDAVGQQFATRMSNVFVIGKGTKSLVSLPA 240
Query: 241 GKGIKLSIIEEA--RKRQAAQAAA 262
KGIK S++EEA ++ AA+ AA
Sbjct: 241 RKGIKKSVLEEADFARKHAAELAA 264
>gi|94468404|gb|ABF18051.1| 40S ribosomal protein S4 [Aedes aegypti]
Length = 262
Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 208/261 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQRH+ +DGKVRTD YPAGFMDV++I KTNENFRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRHIKIDGKVRTDPNYPAGFMDVITIEKTNENFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ K+ D +KF+ GN+
Sbjct: 121 YKLLKVKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GR G + REKH GSFE +H++DA GH FATRL NVF IGK +K ++SLPK
Sbjct: 181 CMITGGRNLGRCGTVIQREKHPGSFEIVHVKDATGHVFATRLTNVFIIGKATKAFISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE KR A++AA
Sbjct: 241 GKGVKLSIAEERDKRLASKAA 261
>gi|378728164|gb|EHY54623.1| 40S ribosomal protein S4 [Exophiala dermatitidis NIH/UT8656]
Length = 264
Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 175/261 (67%), Positives = 207/261 (79%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+APK S GPHK+R+CLPLI+ LRNRLKY+L RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKTRDCLPLIIFLRNRLKYSLNNRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR + VDGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EA+
Sbjct: 61 TTAILMQRLIKVDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRIEQAEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL KITDFI+FD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIRFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IGK KPWVSLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGK-EKPWVSLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE +R+A Q A
Sbjct: 240 GKGVKLSIAEERDRRRAVQLA 260
>gi|395326662|gb|EJF59069.1| 40S ribosomal protein S4 [Dichomitus squalens LYAD-421 SS1]
Length = 261
Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 208/261 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +I+ QR + VDGKVRTD TYPAGFMDV++I K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTSIVQQRLIKVDGKVRTDPTYPAGFMDVITIEKSGEHFRLLYDVKGRFTIHRITPEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR V G +G+PYI T+DGRTIRYPDP+IK NDT++ D+++ KITDF+KFD GN+
Sbjct: 121 YKLLKVRKVAIGNRGVPYIVTHDGRTIRYPDPVIKVNDTVRFDIDQGKITDFVKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V +TGGRNRGR G+I +REKH G F+ +H++D+L FATR+ N+F IG+G+K WVSLPK
Sbjct: 181 VFITGGRNRGRAGVITHREKHVGGFDIVHVKDSLDRTFATRISNIFVIGEGTKSWVSLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGIKL+I EE R+ +AA
Sbjct: 241 GKGIKLTIAEERDVRRKQRAA 261
>gi|339245843|ref|XP_003374555.1| 40S ribosomal protein S4 [Trichinella spiralis]
gi|316972227|gb|EFV55914.1| 40S ribosomal protein S4 [Trichinella spiralis]
Length = 263
Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 174/260 (66%), Positives = 205/260 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAP+HWMLDKL G FAP+PS GPHK RECLPLIL +RNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLNAPRHWMLDKLSGTFAPRPSPGPHKLRECLPLILFIRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I+MQR + VDGKVRTD TYPAGFMDV++I +T E+FRL+YD KGR+ +H + EE+K
Sbjct: 61 AKKIMMQRLIKVDGKVRTDLTYPAGFMDVITIDRTGEHFRLIYDVKGRYVVHRISHEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
KLCKVR V G K IP I T+DGRTIRYPDPLIKAND+I ++E+NKI DF+KFD GN+
Sbjct: 121 LKLCKVRKVMVGPKNIPMIITHDGRTIRYPDPLIKANDSIVYNIEKNKIVDFVKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GRVGII +RE+H GSF+ +H++D G FATRL +F IGKG P +SLP
Sbjct: 181 CMVTGGHNVGRVGIITHRERHPGSFDIVHVRDTTGSTFATRLNYIFVIGKGKDPLISLPS 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
KGIKLSI +E KR AA+
Sbjct: 241 CKGIKLSIGDERAKRLAAKT 260
>gi|295667347|ref|XP_002794223.1| 40S ribosomal protein S4 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286329|gb|EEH41895.1| 40S ribosomal protein S4 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 262
Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPL++ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLVVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL KIT FIKFD G I
Sbjct: 121 YKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDLATGKITSFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAVALAG 261
>gi|61654708|gb|AAX48880.1| S4 [Suberites domuncula]
Length = 261
Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 175/259 (67%), Positives = 207/259 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL+APKHWMLDKL G FAP+PS GPHK REC+PL++ LRNRLKYALT E
Sbjct: 1 MPRGPKKHLKRLHAPKHWMLDKLSGKFAPRPSPGPHKLRECIPLVVFLRNRLKYALTADE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + VD KVRTD T+PAGFMDVVSI KT ENFRLLYD KGRF +H + EEA
Sbjct: 61 VKRIVKQRLIKVDAKVRTDPTFPAGFMDVVSIDKTGENFRLLYDIKGRFTVHRISPEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR +Q G+KGIPY T+DGRTIRYPDP+I NDT+++DL KITD IKFD+GN+
Sbjct: 121 YKLXKVRRIQLGKKGIPYCVTHDGRTIRYPDPVINVNDTVRIDLSTGKITDSIKFDIGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVGII NRE+H GSF+ IH++DA G FATR+ NVF IGKG+K VS+P+
Sbjct: 181 VMVTGGRNLGRVGIITNRERHHGSFDIIHVKDAAGKSFATRMTNVFVIGKGNKAMVSIPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
KGI+L+I EE +R A+
Sbjct: 241 QKGIRLTIAEERDRRLEAK 259
>gi|225680007|gb|EEH18291.1| 40S ribosomal protein S4-A [Paracoccidioides brasiliensis Pb03]
gi|226291789|gb|EEH47217.1| 40S ribosomal protein S4 [Paracoccidioides brasiliensis Pb18]
Length = 262
Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPL++ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLVVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL KIT FIKFD G I
Sbjct: 121 YKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDLATGKITSFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAVALAG 261
>gi|221110073|ref|XP_002154886.1| PREDICTED: 40S ribosomal protein S4-like [Hydra magnipapillata]
Length = 259
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/257 (66%), Positives = 204/257 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAPKHWMLDKL G FAP+PS GPHK RECLPLI+ LRNRLKYAL Y E
Sbjct: 1 MTRGPKKHLKRLNAPKHWMLDKLSGNFAPRPSPGPHKLRECLPLIVFLRNRLKYALNYAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + VDGKVRTD YPAGFMDVVSI +T+ENFRLLYD KGRF + + EE+
Sbjct: 61 VTKIMKQRLIKVDGKVRTDICYPAGFMDVVSIERTHENFRLLYDVKGRFVCNRISAEESA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ GQ IPYI T+DGRTIRYPDP IK NDT+ +D++ KITDFIKFD GN+
Sbjct: 121 YKLAKVKRSAVGQNSIPYIVTHDGRTIRYPDPSIKVNDTVIVDIKTGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVT GRN GRVGII NRE+H S++ +H++D G++FATRL N+F IGKGSKP VSLP+
Sbjct: 181 VMVTAGRNTGRVGIITNRERHPSSYDIVHVKDVTGNQFATRLSNIFLIGKGSKPLVSLPR 240
Query: 241 GKGIKLSIIEEARKRQA 257
GKG++L+I +E +R A
Sbjct: 241 GKGVRLTIADERDRRMA 257
>gi|320586588|gb|EFW99258.1| 40S ribosomal protein s4 [Grosmannia clavigera kw1407]
Length = 259
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/259 (65%), Positives = 208/259 (80%), Gaps = 1/259 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M +G+KKH KRL+AP HW+LDKL G +APK S GPHKSRECLPLI+ LRNRLKYAL YRE
Sbjct: 1 MGKGMKKHQKRLSAPSHWLLDKLSGVYAPKASPGPHKSRECLPLIIFLRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AIL+QR + VD KVRTD TYP GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAILLQRLIKVDHKVRTDTTYPTGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDF+KFD G +
Sbjct: 121 YKLGKVRRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFVKFDTGAL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 AMITGGRNMGRVGVITHRERHDGGFNIVHLKDAIDNTFATRESNVFVIGT-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQ 259
G+G+KL+I EE +R+AAQ
Sbjct: 240 GRGVKLTIAEERDRRRAAQ 258
>gi|403218384|emb|CCK72874.1| hypothetical protein KNAG_0M00210 [Kazachstania naganishii CBS
8797]
Length = 261
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 171/260 (65%), Positives = 209/260 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPNHWLLDKLTGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILM+RHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAILMERHVKVDGKVRTDTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G++G+PY+ T+DGRTIRYPDP IK NDT+K+DL KI D+IKFD G +
Sbjct: 121 YKLGKVKKVQLGKRGVPYVVTHDGRTIRYPDPNIKINDTVKIDLASGKIVDYIKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYVTGGRNLGRIGTIIHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGETGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKL+I EE +R+A Q
Sbjct: 241 GKGIKLTIAEERDRRRAQQG 260
>gi|238589837|ref|XP_002392136.1| hypothetical protein MPER_08330 [Moniliophthora perniciosa FA553]
gi|215457775|gb|EEB93066.1| hypothetical protein MPER_08330 [Moniliophthora perniciosa FA553]
Length = 264
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 170/264 (64%), Positives = 210/264 (79%), Gaps = 2/264 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+ QR + +DGKVRTD+TYP GFMDVVSI K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTAIVKQRLIKIDGKVRTDETYPTGFMDVVSIEKSGEHFRLLYDVKGRFTIHRITPEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ V G +G+P+I T+DGRTIRYPDP I NDT+K D+++NKI DF+KFD GNI
Sbjct: 121 YKLLKVKKVALGARGVPHIVTHDGRTIRYPDPSINVNDTVKFDIQQNKIVDFVKFDTGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GR G+I +R+KH G F+ +H++D+L FATRL N+F IG+G+KPW+SLPK
Sbjct: 181 VMVTGGRNMGRAGVIVHRKKHIGDFDIVHVKDSLDRTFATRLSNIFVIGEGTKPWISLPK 240
Query: 241 GKGIKLSIIEE--ARKRQAAQAAA 262
GKG KL+I EE R+++AA+A+
Sbjct: 241 GKGTKLTIAEERDVRRKRAAEAST 264
>gi|50423849|ref|XP_460509.1| 40S ribosomal protein S4 [Debaryomyces hansenii CBS767]
gi|49656178|emb|CAG88822.1| DEHA2F03300p [Debaryomyces hansenii CBS767]
Length = 263
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/260 (66%), Positives = 209/260 (80%), Gaps = 1/260 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVIFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ HV VDGKVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQEHVKVDGKVRTDATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRITAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G++GIPY+ T+DGRTIRYPDPLI+AND++K+DL KITDFI FD G +
Sbjct: 121 YKLAKVKKVQLGKRGIPYVVTHDGRTIRYPDPLIRANDSVKVDLATGKITDFISFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF +G + KP +SLP
Sbjct: 181 VMVTGGRNMGRVGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFIVGTEAGKPHISLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQ 259
KGKGIKLSI EE +R+ Q
Sbjct: 241 KGKGIKLSISEERDRRRNQQ 260
>gi|403419501|emb|CCM06201.1| predicted protein [Fibroporia radiculosa]
Length = 290
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 171/259 (66%), Positives = 205/259 (79%), Gaps = 2/259 (0%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKRL AP WMLDKL G +AP+PS GPHK RECLPL + LRNRLKYALT +EV
Sbjct: 29 ARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRECLPLTIFLRNRLKYALTGKEV 88
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
+I+MQR + VD KVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA +
Sbjct: 89 TSIVMQRLIKVDAKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATY 148
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KL KVR + G KG+PYI T+DGRTIRYPDP IK NDT+K DLE+ KI DF+KFD GNIV
Sbjct: 149 KLLKVRKMAIGNKGVPYIVTHDGRTIRYPDPAIKVNDTVKFDLEQGKIVDFVKFDTGNIV 208
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M+TGGRN GR G+I +REKH G F+ +H++D+L FATR+ N+F +G+G KPW+SLPKG
Sbjct: 209 MITGGRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRISNIFVLGEGIKPWISLPKG 268
Query: 242 KGIKLSIIEE--ARKRQAA 258
KG KL+I EE R+RQ A
Sbjct: 269 KGTKLTITEERDVRRRQRA 287
>gi|323308526|gb|EGA61771.1| Rps4ap [Saccharomyces cerevisiae FostersO]
gi|323354309|gb|EGA86152.1| Rps4ap [Saccharomyces cerevisiae VL3]
Length = 277
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/255 (67%), Positives = 206/255 (80%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AIL
Sbjct: 22 KKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIL 81
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 82 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 141
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTG
Sbjct: 142 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 201
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 202 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 261
Query: 246 LSIIEEARKRQAAQA 260
LSI EE +R+A Q
Sbjct: 262 LSIAEERDRRRAQQG 276
>gi|321450822|gb|EFX62690.1| hypothetical protein DAPPUDRAFT_300650 [Daphnia pulex]
Length = 244
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/243 (70%), Positives = 199/243 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLVVFLRNRLKYALNNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDSNYPAGFMDVITIDKTGEYFRLVYDVKGRFAIHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ G KGIP+I T+DGRTIRYPDPL+K NDTI+LD+ NKI DFIKFD GN+
Sbjct: 121 YKLCKVRRVQVGPKGIPFITTHDGRTIRYPDPLVKVNDTIQLDIATNKIMDFIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG I NRE+H GSF+ +H++DALGH FATRL NVF IGKGSK ++SLP+
Sbjct: 181 CMITGGRNLGRVGTIINRERHPGSFDIVHVKDALGHLFATRLNNVFIIGKGSKAYISLPR 240
Query: 241 GKG 243
KG
Sbjct: 241 DKG 243
>gi|310791164|gb|EFQ26693.1| ribosomal family S4e [Glomerella graminicola M1.001]
Length = 262
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 211/262 (80%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL G +AP+PS+GPHK R+CLPLI+ LRNRLKYAL +RE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+I+MQR + VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TRSIMMQRLIKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL+ KI DFIKFD G+I
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGS-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KL+I EE +R+A A
Sbjct: 240 GKGVKLTIAEERDRRRANALAG 261
>gi|254584933|ref|XP_002498034.1| 40S ribosomal protein S4 [Zygosaccharomyces rouxii]
gi|238940928|emb|CAR29101.1| ZYRO0G00550p [Zygosaccharomyces rouxii]
Length = 261
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 170/260 (65%), Positives = 207/260 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGTYAPRPSQGPHKLRESLPLVVFLRNRLKYALNTRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQRHV VDGKVRTD T+PAGFMDV+S+ TNENFRL+YD KGRF +H + DEEA
Sbjct: 61 VKAIMMQRHVKVDGKVRTDSTFPAGFMDVISLDATNENFRLVYDVKGRFAVHRITDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIR+PDP +K NDT+K+DL KI D+IKFD G +
Sbjct: 121 YKLGKVKKVQLGKKGIPYVVTHDGRTIRFPDPNVKVNDTVKIDLASGKIQDYIKFDTGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPK
Sbjct: 181 VYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGIKLSI EE +R+A
Sbjct: 241 GKGIKLSITEERDRRRAQNG 260
>gi|296482862|tpg|DAA24977.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 211/262 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWML+KL G FA +PS+GPHK RECLPLI+ LRNRLK ALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLEKLTGVFALRPSAGPHKLRECLPLIIFLRNRLKCALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKG F +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGHFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDF+KFD GN+
Sbjct: 121 YKLYKVRKIFMGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFMKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG + GR+G+I +RE+H GSF+ +H++DA G+ FATRL ++F IGKG+KPW+SLP
Sbjct: 181 CMVTGGASLGRIGVITSRERHPGSFDVVHVKDANGNSFATRLSDIFVIGKGNKPWISLPH 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR A + ++
Sbjct: 241 GKGIRLTIAEERDKRLAVKQSS 262
>gi|148691968|gb|EDL23915.1| mCG1288 [Mus musculus]
Length = 266
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 172/260 (66%), Positives = 205/260 (78%), Gaps = 1/260 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP PS+GPHK RECLP I+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPSPSTGPHKLRECLPPIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGK+RT YPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKIRTGFIYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RT RYPDPLIK N TI++DLE K+TDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTTRYPDPLIKVNVTIQIDLETGKVTDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G FATRL N+F IGKG+K W+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGKSFATRLSNIFVIGKGNKSWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKGI+L+I EE R+ Q
Sbjct: 241 GKGIRLTIAEE-RQEACGQT 259
>gi|385304652|gb|EIF48661.1| 40s ribosomal protein s4 [Dekkera bruxellensis AWRI1499]
Length = 262
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 172/261 (65%), Positives = 211/261 (80%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG K HLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKHHLKRLAAPNHWMLDKLSGVYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILM+R V VDGKVRTD T+PAGFMDV+S+ TNENFRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMERQVKVDGKVRTDTTFPAGFMDVISLDATNENFRLVYDIKGRFAIHRITPEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPYI T+DGRTIRYPDP IK D++K+DL+ KI+ FIKF+ G +
Sbjct: 121 YKLAKVKKVQLGKKGIPYIVTHDGRTIRYPDPAIKVGDSVKVDLDTGKISSFIKFETGKL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS-KPWVSLP 239
MVTGGRN GRVG+I ++E+H+G F+ ++I+D+L + F TRL NVF IG+G+ KPW+SLP
Sbjct: 181 AMVTGGRNLGRVGVITHKERHEGGFDLVYIKDSLDNTFITRLNNVFVIGEGAGKPWISLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKG+KLSI EE +R+AAQ
Sbjct: 241 KGKGVKLSISEERDRRRAAQG 261
>gi|294889902|ref|XP_002772984.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
gi|239877687|gb|EER04800.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
Length = 268
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 164/255 (64%), Positives = 208/255 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHW+LDKL G +AP+PS+GPHK REC+PLI++LRNRLKYALTY E
Sbjct: 1 MARGPKKHLKRVFAPKHWLLDKLAGVWAPRPSTGPHKLRECMPLIVLLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD +YPAGFMDV++I KT ENFRLL+DTKGRF +H + +EA
Sbjct: 61 VKMIVMQRLIKVDGKVRTDMSYPAGFMDVITIEKTKENFRLLFDTKGRFAIHKIHPDEAA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ V G KG+PY NT+DGRTIRYPDP IK ND++++D++ K+ DF+KF++G
Sbjct: 121 YKLCRVKKVYMGSKGVPYANTHDGRTIRYPDPEIKENDSVRVDIQTGKVLDFLKFEIGAT 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGG N GRVG+I +RE+H G+FE IH++DA G+ FATRL NVF IG KPWVSLPK
Sbjct: 181 VMMTGGNNIGRVGVITHRERHPGNFEIIHVRDAAGNNFATRLSNVFVIGHEGKPWVSLPK 240
Query: 241 GKGIKLSIIEEARKR 255
G G++LS +E+ R
Sbjct: 241 GDGVQLSTVEDRHMR 255
>gi|109509108|gb|ABG34271.1| 40S ribosomal protein S4 [Culex pipiens pallens]
Length = 262
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 209/261 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQRH+ +DGKVRTD YPAGFMDV++I KT+ENFRL+YD KGRF +H + EEAK
Sbjct: 61 VTRIVMQRHIKIDGKVRTDINYPAGFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ K+ D +KF+ GN+
Sbjct: 121 YKLLKVKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GR G + REKH GSFE +HI+D+ GH FATRL NVF IGKG+K ++SLPK
Sbjct: 181 CMITGGRNLGRCGTVIQREKHPGSFEIVHIKDSTGHVFATRLTNVFIIGKGTKAFISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE KR A++AA
Sbjct: 241 GKGVKLSIAEERDKRLASKAA 261
>gi|380487060|emb|CCF38284.1| 40S ribosomal protein S4 [Colletotrichum higginsianum]
Length = 262
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 210/262 (80%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL G +AP+PS+GPHK R+CLPLI+ LRNRLKYAL +RE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ILMQR + VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TRSILMQRLIKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL+ KI DFIKFD G+I
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIG-SEKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
KG+KL+I EE +R+A A
Sbjct: 240 SKGVKLTIAEERDRRRANALAG 261
>gi|322784955|gb|EFZ11726.1| hypothetical protein SINV_08231 [Solenopsis invicta]
Length = 261
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 174/260 (66%), Positives = 207/260 (79%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+MQR + VDGK+RTD YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+
Sbjct: 61 TKIVMQRLIKVDGKIRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKY 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ +KI D I+FD GN+
Sbjct: 121 KLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATSKILDSIRFDSGNLC 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M+TGGRN GRVG + +RE+H GSF+ HI+DA GH FATRL NVF IGKG+K +VSLP+
Sbjct: 181 MITGGRNLGRVGTVVSRERHPGSFDICHIKDAQGHTFATRLNNVFIIGKGTKAYVSLPRD 240
Query: 242 KGIKLSIIEEARKRQAAQAA 261
KG+KLSI EE KR AA+
Sbjct: 241 KGVKLSIAEERDKRLAAKGV 260
>gi|429860169|gb|ELA34915.1| 40s ribosomal protein s4 [Colletotrichum gloeosporioides Nara gc5]
Length = 262
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 212/262 (80%), Gaps = 2/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL G +AP+PS+GPHK R+CLPLI+ LRNRLKYAL YRE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+I+MQR + VD KVRTD T+PAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TRSIMMQRLIKVDHKVRTDITFPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL+ KI DFIKFD G+I
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIG-SEKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KL+I EE R R+ AQA A
Sbjct: 240 GKGVKLTIAEE-RDRRRAQALA 260
>gi|393233644|gb|EJD41214.1| hypothetical protein AURDEDRAFT_186691 [Auricularia delicata
TFB-10046 SS5]
Length = 361
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 207/262 (79%), Gaps = 2/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
+ARG +KHLKRL AP WMLDKL G +AP+PS GPHK RE PL ++LRNRLKYA+T RE
Sbjct: 97 LARGPRKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESFPLTILLRNRLKYAITGRE 156
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL+QR V VDGKVRTD TYP GFMDV+S+ +T E+FR+LYD KGRF +H + EEA
Sbjct: 157 VTKILLQRLVKVDGKVRTDDTYPTGFMDVISLERTGEHFRILYDVKGRFVIHRITAEEAS 216
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR V G +G+PYI T+DGRTIRYPDPLI+ NDT+K D+E+NKI DF+KFD GNI
Sbjct: 217 YKLLKVRRVALGARGVPYIVTHDGRTIRYPDPLIRTNDTVKFDIEQNKIVDFVKFDTGNI 276
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V+VTGGRN GR G+I +RE H G F+ +H++D+L FATR+ N+F IG+G+KPW+SLPK
Sbjct: 277 VIVTGGRNMGRAGVITHREHHHGGFDIVHVRDSLDRTFATRISNIFVIGEGTKPWISLPK 336
Query: 241 GKGIKLSIIEE--ARKRQAAQA 260
GKG KL+I EE R+RQ A A
Sbjct: 337 GKGTKLTISEERDVRRRQKAAA 358
>gi|294875217|ref|XP_002767227.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
gi|239868773|gb|EEQ99944.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
Length = 268
Score = 363 bits (931), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 163/251 (64%), Positives = 207/251 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHW+LDKL G +AP+PS+GPHK REC+PLI++LRNRLKYALTY E
Sbjct: 1 MARGPKKHLKRVFAPKHWLLDKLAGVWAPRPSTGPHKLRECMPLIVLLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD +YPAGFMDV++I KT ENFRLL+DTKGRF +H + +EA
Sbjct: 61 VKMIVMQRLIKVDGKVRTDMSYPAGFMDVITIEKTKENFRLLFDTKGRFAIHKIHPDEAA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ V G KG+PY NT+DGRTIRYPDP IK ND++++D++ K+ DF+KF++G
Sbjct: 121 YKLCRVKKVYMGSKGVPYANTHDGRTIRYPDPEIKENDSVRIDIQTGKVLDFLKFEIGAT 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGG N GRVG+I +RE+H G+FE IH++DA G+ FATRL NVF IG KPWVSLPK
Sbjct: 181 VMMTGGNNIGRVGVITHRERHPGNFEIIHVRDAAGNNFATRLSNVFVIGHEGKPWVSLPK 240
Query: 241 GKGIKLSIIEE 251
G G++LS +E+
Sbjct: 241 GDGVQLSTVED 251
>gi|346977567|gb|EGY21019.1| 40S ribosomal protein S4-A [Verticillium dahliae VdLs.17]
Length = 262
Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 209/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL G +AP+PS+GPHK R+C+PLI+ LRNRLKYAL +RE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGTYAPRPSAGPHKLRDCMPLIVFLRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+I+MQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YD KGRF +H ++ EEA+
Sbjct: 61 TRSIMMQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDIKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F IH++DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIIHVKDAIDNTFATRESNVFVIGS-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KL+I EE +R+A A
Sbjct: 240 GKGVKLTIAEERDRRRAHAIAG 261
>gi|327353918|gb|EGE82775.1| 40S ribosomal protein S4 [Ajellomyces dermatitidis ATCC 18188]
Length = 302
Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 41 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNSRE 100
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 101 TNAILMQRLVKVDGKVRTDSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAE 160
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I
Sbjct: 161 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVI 220
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 221 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRETNVFIIGQ-DKPWISLPK 279
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 280 GKGVKLSIAEERDRRRAMALAG 301
>gi|88703062|ref|NP_001034656.1| 40S ribosomal protein S4, Y isoform 2 [Homo sapiens]
gi|27805713|sp|Q8TD47.3|RS4Y2_HUMAN RecName: Full=40S ribosomal protein S4, Y isoform 2
gi|20269858|gb|AAM18074.1|AF497481_1 ribosomal protein S4 [Homo sapiens]
Length = 263
Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 208/262 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ + +DGKVR D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H + EEAK
Sbjct: 61 VKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV G N GRVG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 181 CMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|403302644|ref|XP_003941964.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Saimiri boliviensis boliviensis]
gi|403302646|ref|XP_003941965.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Saimiri boliviensis boliviensis]
gi|403302648|ref|XP_003941966.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Saimiri boliviensis boliviensis]
Length = 263
Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 207/262 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G KKHLKR+ APKH MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MACGPKKHLKRVAAPKHRMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V + MQ + +DGKVR D TYPAGFMDV+SI K ENF L+YDTKGRF + + EEAK
Sbjct: 61 VKKVCMQWFIKIDGKVRADITYPAGFMDVISIDKMGENFHLIYDTKGRFAVRRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
KLCKVR + G KGIP++ T+D RTIRYPDPLI+ NDTI+ DLE KITDFIKFD GN+
Sbjct: 121 HKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIRVNDTIQTDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRTGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|154273927|ref|XP_001537815.1| 40S ribosomal protein S4 [Ajellomyces capsulatus NAm1]
gi|150415423|gb|EDN10776.1| ribosomal protein S4 [Ajellomyces capsulatus NAm1]
Length = 262
Score = 362 bits (930), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAMALAG 261
>gi|170086746|ref|XP_001874596.1| 40S ribosomal protein S4 [Laccaria bicolor S238N-H82]
gi|164649796|gb|EDR14037.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 362 bits (930), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 208/262 (79%), Gaps = 3/262 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+ QR + +DGKVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTAIVKQRLIKIDGKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEAN 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR V G +G+P+I T+DGRTIRYPDPLI+ NDT+K DLE+ KITD++KFD GNI
Sbjct: 121 YKLLKVRRVAIGARGVPHIVTHDGRTIRYPDPLIQVNDTVKFDLEQGKITDYVKFDTGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGGRN GR G+I +REKH G F+ +H++D+L FATR+ N+F IG+G KPW+SLPK
Sbjct: 181 VMITGGRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRVTNIFVIGEGIKPWISLPK 240
Query: 241 GKGIKLSIIEE---ARKRQAAQ 259
GKG KL+I EE RK++A Q
Sbjct: 241 GKGTKLTISEERDVKRKQRAEQ 262
>gi|402075079|gb|EJT70550.1| 40S ribosomal protein S4-A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 261
Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 206/261 (78%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G +APKPS GPHK RECLPL++ LRNRLKYAL +RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGVYAPKPSPGPHKQRECLPLVVFLRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VD KVRTD TYP GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAILMQRLVKVDAKVRTDATYPTGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RT+RYPDPLIK NDT+K+DL KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTVRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GR+G+I +RE+H G F +H++DA+ + FATR NVF +G KPW+SLPK
Sbjct: 181 AMVTGGRNMGRIGVITHRERHHGGFNIVHLKDAIDNTFATRESNVFVVGT-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KL+I EE +R+A A
Sbjct: 240 GKGVKLTIAEERDRRRAHTIA 260
>gi|171685031|ref|XP_001907457.1| hypothetical protein [Podospora anserina S mat+]
gi|170942476|emb|CAP68128.1| unnamed protein product [Podospora anserina S mat+]
Length = 259
Score = 362 bits (929), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 169/257 (65%), Positives = 209/257 (81%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G +AP+PS+GPHK R+C+PLI+ +RNRLKYAL +RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGVYAPRPSAGPHKLRDCMPLIVFVRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + DEE+K
Sbjct: 61 TRAILMQRLVKVDGKVRTDMTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIGDEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K++LE KI DFIKFD G I
Sbjct: 121 YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFIKFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHLKDAIDNSFATRETNVFVIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +++A
Sbjct: 240 GKGVKLTIAEERDRKRA 256
>gi|299745325|ref|XP_001831641.2| 40S ribosomal protein S4 [Coprinopsis cinerea okayama7#130]
gi|298406535|gb|EAU90174.2| 40s ribosomal protein s4 [Coprinopsis cinerea okayama7#130]
Length = 263
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 208/262 (79%), Gaps = 3/262 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKLGG +A +PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLGGTYASRPSPGPHKLRESLPLTVFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +I+ QR + +DGKVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTSIVKQRLIKIDGKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ V G +G+P++ T+DGRTIRYPDPLIK NDT+K DLE+NKITDF+KFD GN+
Sbjct: 121 YKLLKVKRVALGARGVPHVVTHDGRTIRYPDPLIKVNDTVKFDLEQNKITDFVKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V+VTGGRN GR G I ++EKH G F+ +HI+D+L FATR+ NVF IG+G+K W+SLPK
Sbjct: 181 VIVTGGRNMGRAGTIVHKEKHVGGFDIVHIKDSLDRTFATRVSNVFVIGEGTKAWISLPK 240
Query: 241 GKGIKLSIIEE---ARKRQAAQ 259
GKG+KL+I EE RKR AA
Sbjct: 241 GKGLKLTIAEERDVRRKRAAAD 262
>gi|119192028|ref|XP_001246620.1| 40S ribosomal protein S4 [Coccidioides immitis RS]
gi|303313163|ref|XP_003066593.1| 40S ribosomal protein S4 [Coccidioides posadasii C735 delta SOWgp]
gi|240106255|gb|EER24448.1| 40S ribosomal protein S4, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320036517|gb|EFW18456.1| 40S ribosomal protein S4 [Coccidioides posadasii str. Silveira]
gi|392864147|gb|EAS35046.2| 40S ribosomal protein S4 [Coccidioides immitis RS]
Length = 262
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 174/262 (66%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEA+
Sbjct: 61 TNAILMQRLVKVDGKVRTDATYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRISGEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H+G F +HI+DA+ + FATR NVF IG KPWVSLPK
Sbjct: 181 CMATGGRNMGRVGVITHRERHEGGFGIVHIKDAIDNTFATRESNVFVIGH-EKPWVSLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAMALAG 261
>gi|29841450|gb|AAP06482.1| SJCHGC06323 protein [Schistosoma japonicum]
gi|226469680|emb|CAX76670.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469684|emb|CAX76672.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469688|emb|CAX76674.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469694|emb|CAX76677.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473022|emb|CAX71197.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473024|emb|CAX71198.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473026|emb|CAX71199.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473028|emb|CAX71200.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 169/258 (65%), Positives = 205/258 (79%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG +KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL QR V VDG+VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR V G G+P+I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+
Sbjct: 123 KLCKVRKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMC 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK
Sbjct: 183 MVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKS 242
Query: 242 KGIKLSIIEEARKRQAAQ 259
+GI+LSIIEE KR A+
Sbjct: 243 RGIRLSIIEERDKRIRAR 260
>gi|389739254|gb|EIM80448.1| 40S ribosomal protein S4 [Stereum hirsutum FP-91666 SS1]
Length = 263
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 204/261 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MGRGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +I+ QR + VDGKVRTD TYP GFMDV++I K+ E+FRLLYD KGRF +H + EEA+
Sbjct: 61 VTSIVQQRLIKVDGKVRTDNTYPTGFMDVLTIEKSGEHFRLLYDVKGRFTIHRITPEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ V G K +PYI T+DGRTIRYPDPLIK NDT+K D +NKITD+ KFD GNI
Sbjct: 121 YKLLKVKKVAIGAKAVPYIVTHDGRTIRYPDPLIKVNDTVKFDFTQNKITDYAKFDTGNI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGGRN GR G+I +REKH G F+ +H++DAL FATR+ N+F IG+G+KPW+SLPK
Sbjct: 181 VMITGGRNMGRSGVIVHREKHIGDFDIVHVKDALDRTFATRITNIFVIGEGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG KL+I EE R+ +AA
Sbjct: 241 GKGTKLTIAEERDVRRKQRAA 261
>gi|212544592|ref|XP_002152450.1| 40S ribosomal protein S4 [Talaromyces marneffei ATCC 18224]
gi|210065419|gb|EEA19513.1| 40S ribosomal protein S4, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 210/262 (80%), Gaps = 2/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +AP+ S+GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPAHWLLDKMSGTYAPRASAGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAILMQRLVQVDGKVRTDPTFPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RT+RYPDPLIK NDT+K+DL KITDF+KFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTVRYPDPLIKVNDTVKIDLATGKITDFVKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNTFATRESNVFVIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE R R+ AQA A
Sbjct: 240 GKGVKLSIAEE-RDRRRAQAIA 260
>gi|226469690|emb|CAX76675.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 169/258 (65%), Positives = 205/258 (79%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG +KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL QR V VDG+VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR V G G+P+I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+
Sbjct: 123 KLCKVRKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMC 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK
Sbjct: 183 MVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKS 242
Query: 242 KGIKLSIIEEARKRQAAQ 259
+GI+LSIIEE KR A+
Sbjct: 243 RGIRLSIIEERDKRIRAR 260
>gi|170034084|ref|XP_001844905.1| 40S ribosomal protein S4 [Culex quinquefasciatus]
gi|167875313|gb|EDS38696.1| 40S ribosomal protein S4 [Culex quinquefasciatus]
Length = 263
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 170/260 (65%), Positives = 208/260 (80%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV
Sbjct: 3 ARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNNEV 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+MQRH+ +DGKVRTD YPAGFMDV++I KT+ENFRL+YD KGRF +H + EEAK+
Sbjct: 63 TRIVMQRHIKIDGKVRTDINYPAGFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KL KV+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ K+ D +KF+ GN+
Sbjct: 123 KLLKVKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLC 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M+TGGRN GR G + REKH GSFE +HI+D+ GH FATRL NVF IGKG+K ++SLPKG
Sbjct: 183 MITGGRNLGRCGTVIQREKHPGSFEIVHIKDSTGHVFATRLTNVFIIGKGTKAFISLPKG 242
Query: 242 KGIKLSIIEEARKRQAAQAA 261
KG+KLSI EE KR A++AA
Sbjct: 243 KGVKLSIAEERDKRLASKAA 262
>gi|344304439|gb|EGW34671.1| ribosomal protein S4 [Spathaspora passalidarum NRRL Y-27907]
Length = 262
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 206/261 (78%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQ+HV VD KVRTD T+P GFMDV+++ TNE+FRL+YD KGRF +H + EEA
Sbjct: 61 VKAILMQQHVKVDAKVRTDSTFPTGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEAA 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLI+ NDT+K+DL KI+DFI FD G +
Sbjct: 121 YKLGKVKKVQLGKKGIPYVVTHDGRTIRYPDPLIRVNDTVKIDLATGKISDFIPFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG I ++E H G F+ +HI+D+L + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRVGAIVHKEHHAGGFDLVHIKDSLDNTFVTRLSNVFVIGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKL+I EE +R+ Q
Sbjct: 241 KGKGIKLTISEERDRRRTQQG 261
>gi|226469692|emb|CAX76676.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 169/258 (65%), Positives = 205/258 (79%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG +KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL QR V VDG+VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR V G G+P+I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+
Sbjct: 123 KLCKVRKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMC 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK
Sbjct: 183 MVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKS 242
Query: 242 KGIKLSIIEEARKRQAAQ 259
+GI+LSIIEE KR A+
Sbjct: 243 RGIRLSIIEERDKRIRAR 260
>gi|261204631|ref|XP_002629529.1| 40S ribosomal protein S4 [Ajellomyces dermatitidis SLH14081]
gi|239587314|gb|EEQ69957.1| ribosomal protein S4 [Ajellomyces dermatitidis SLH14081]
gi|239614147|gb|EEQ91134.1| ribosomal protein S4 [Ajellomyces dermatitidis ER-3]
Length = 262
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNSRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRETNVFIIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAMALAG 261
>gi|393221758|gb|EJD07242.1| hypothetical protein FOMMEDRAFT_164273 [Fomitiporia mediterranea
MF3/22]
Length = 369
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 169/260 (65%), Positives = 206/260 (79%), Gaps = 2/260 (0%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG +KHLKRLNAP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT REV
Sbjct: 107 ARGPRKHLKRLNAPSAWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGREV 166
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
AI+ QR + VDGKVRTD+T+P GFMDVV+I K+ E+FRLLYD KGRF +H + EEA +
Sbjct: 167 TAIVNQRIIRVDGKVRTDETFPTGFMDVVTIEKSGEHFRLLYDVKGRFAIHRITPEEASY 226
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G+ +P+I T+DGRTIRYPDPLIK NDT+K D E+NKITDF+KFD GNIV
Sbjct: 227 KLCKVRKIGIGRNAVPHIVTHDGRTIRYPDPLIKVNDTVKFDFEQNKITDFVKFDTGNIV 286
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRN GR G+I +REK+ G + +H++DAL F TR+ N+F IG+G KPW+SLPKG
Sbjct: 287 MVTGGRNMGRAGVIVHREKNDGGHDMVHVRDALDRTFVTRVSNIFVIGEGIKPWISLPKG 346
Query: 242 KGIKLSIIEE--ARKRQAAQ 259
KG KL+I EE R++Q A+
Sbjct: 347 KGTKLTISEERDLRRKQRAE 366
>gi|256072589|ref|XP_002572617.1| 40S ribosomal protein S4 [Schistosoma mansoni]
gi|360044250|emb|CCD81797.1| putative 40s ribosomal protein S4 [Schistosoma mansoni]
Length = 264
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/261 (65%), Positives = 205/261 (78%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG +KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLCIFLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL QR V VDG+VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ V G G+PYI T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+
Sbjct: 123 KLCKVKKVLVGHGGVPYIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMC 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK
Sbjct: 183 MVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKN 242
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
+GI+LSIIEE KR A+ A
Sbjct: 243 RGIRLSIIEERDKRIRARRLA 263
>gi|225559261|gb|EEH07544.1| 40S ribosomal protein S4 [Ajellomyces capsulatus G186AR]
gi|240282196|gb|EER45699.1| 40S ribosomal protein S4 [Ajellomyces capsulatus H143]
gi|325088332|gb|EGC41642.1| 40S ribosomal protein S4 [Ajellomyces capsulatus H88]
Length = 262
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYP GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTYPTGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGAI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAMALAG 261
>gi|406868524|gb|EKD21561.1| 40S ribosomal protein S4 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 262
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL GA+AP+ S GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGAYAPRASPGPHKLRDCMPLIVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIVMQRLIKVDGKVRTDATYPAGFMDVISIEKTGEHFRLVYDTKGRFTVHRIQTEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRENNVFVIG-SEKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A+
Sbjct: 240 GKGVKLSIAEERDRRRAHAIAS 261
>gi|440633275|gb|ELR03194.1| 40S ribosomal protein S4 [Geomyces destructans 20631-21]
Length = 261
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 208/261 (79%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCMPLIVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV++I KT E+FRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIVMQRLIKVDGKVRTDTTYPAGFMDVITIEKTGEHFRLVYDTKGRFTVHRVQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG G KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRENNVFVIG-GEKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KL+I EE +R+A Q A
Sbjct: 240 GKGVKLTIAEERDRRRAQQIA 260
>gi|154290538|ref|XP_001545862.1| 40S ribosomal protein S4 [Botryotinia fuckeliana B05.10]
gi|347841950|emb|CCD56522.1| similar to 40S ribosomal protein S4 [Botryotinia fuckeliana]
Length = 262
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS+GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPNHWLLDKLSGAYAPRPSAGPHKLRDCMPLIVFIRNRLKYALNSRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV+ I KT+ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIVMQRLIKVDGKVRTDATYPAGFMDVIGIEKTSENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPSIKVNDTVKIDLATGKITDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIG-AEKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KL+I EE +R+A A
Sbjct: 240 GKGVKLTIAEERDRRRAHAIAG 261
>gi|301101263|ref|XP_002899720.1| 40S ribosomal protein S4 [Phytophthora infestans T30-4]
gi|262102722|gb|EEY60774.1| 40S ribosomal protein S4 [Phytophthora infestans T30-4]
Length = 261
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 168/251 (66%), Positives = 204/251 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG +KHLKR++APKHWML KL G +AP+PSSGPHK RECLPLI++LRNRLKYALT +E
Sbjct: 1 MPRGPRKHLKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ+ V VDGKVR D +PAGFMDVV +PKT + FRL+YDTKGRF LH + DEE K
Sbjct: 61 VTMICMQKSVKVDGKVRVDPDFPAGFMDVVELPKTGDQFRLMYDTKGRFVLHRISDEEKK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL KV ++ +K IPYI T DGRTIRYPDPLIK DT+K+DLE K+ D IKF+VGN+
Sbjct: 121 FKLAKVIRQEYTKKAIPYIATNDGRTIRYPDPLIKVGDTVKIDLETGKVVDHIKFEVGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V +T GRN GRVGI+ N E+H+GSF H++D+ G++FATRLGNVF +GK ++PWVSLPK
Sbjct: 181 VTITRGRNSGRVGILHNVERHQGSFNIAHVKDSAGNDFATRLGNVFAVGKEARPWVSLPK 240
Query: 241 GKGIKLSIIEE 251
GKGIKL+I+EE
Sbjct: 241 GKGIKLNILEE 251
>gi|327305991|ref|XP_003237687.1| 40S ribosomal protein S4 [Trichophyton rubrum CBS 118892]
gi|326460685|gb|EGD86138.1| 40S ribosomal protein S4 [Trichophyton rubrum CBS 118892]
Length = 259
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/257 (66%), Positives = 207/257 (80%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ILMQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TNSILMQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPSIRVNDTVKIDIATGKITDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPWVSLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWVSLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|242812945|ref|XP_002486066.1| 40S ribosomal protein S4 [Talaromyces stipitatus ATCC 10500]
gi|218714405|gb|EED13828.1| 40S ribosomal protein S4, putative [Talaromyces stipitatus ATCC
10500]
Length = 263
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 172/261 (65%), Positives = 208/261 (79%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +AP+ S+GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPAHWLLDKMSGTYAPRASAGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAILMQRLVQVDGKVRTDPTFPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNTFATRESNVFVIGQ-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAYALA 260
>gi|108861826|gb|ABG21815.1| 40S ribosomal protein S4-like protein [Schistosoma mansoni]
Length = 264
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 205/261 (78%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG +KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLCIFLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL QR V VDG+VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ V G G+PYI T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+
Sbjct: 123 KLCKVKKVLVGHGGVPYIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMC 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK ++PW+SLPK
Sbjct: 183 MVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNQPWISLPKN 242
Query: 242 KGIKLSIIEEARKRQAAQAAA 262
+GI+LSIIEE KR A+ A
Sbjct: 243 RGIRLSIIEERDKRIRARRLA 263
>gi|392589813|gb|EIW79143.1| 40S ribosomal protein S4 [Coniophora puteana RWD-64-598 SS2]
Length = 263
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 204/261 (78%), Gaps = 2/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYAL+ E
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALSGSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + VDGKVRTD TYPAGFMD +SI K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTKIVKQRLIKVDGKVRTDNTYPAGFMDTISIEKSGEHFRLLYDVKGRFTIHRITPEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KVR V G K +PYI T+DGRTIRYPDPLIK NDT+K DLE+NKI +F KFD GN+
Sbjct: 121 YKLLKVRKVAVGAKSVPYIVTHDGRTIRYPDPLIKVNDTVKFDLEQNKILEFAKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GR G+I +RE+H G F+ +H++D+L FATR+ N+F IG+G+KPW+SLPK
Sbjct: 181 VMVTGGRNMGRAGVITHRERHIGDFDIVHVKDSLDRTFATRISNIFVIGEGNKPWISLPK 240
Query: 241 GKGIKLSIIEE--ARKRQAAQ 259
GKG+KL+I EE R+RQ +
Sbjct: 241 GKGVKLTISEERDMRRRQRSS 261
>gi|451997437|gb|EMD89902.1| hypothetical protein COCHEDRAFT_1177980 [Cochliobolus
heterostrophus C5]
Length = 262
Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KH KRL+AP HW+LDKL GA+APK S GPHK R+ LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPVKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKLRDSLPLIIFLRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQR V VDGKVRTD T+P G MDV+SI KT ENFRL+YDTKGRF +H + DEEA+
Sbjct: 61 VNAILMQRLVKVDGKVRTDSTFPTGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL KI+DFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKVDLSTGKISDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+I +RE+H G F +HI+DA+ +EF TR NV IGK KPW+SLPK
Sbjct: 181 VMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAYALAG 261
>gi|198415701|ref|XP_002127921.1| PREDICTED: similar to ribosomal protein S4, X-linked X [Ciona
intestinalis]
Length = 259
Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 169/259 (65%), Positives = 203/259 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPKHWMLDKL G FAP+PS+GPHK RECLPL + LRNRL YALTY E
Sbjct: 1 MARGPKKHLKRLNAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLCIFLRNRLHYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
ILMQR V VDGKVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H + +EAK
Sbjct: 61 TKRILMQRLVKVDGKVRTDTTYPAGFMDVITIDKTAEYFRLIYDVKGRFAVHRITSDEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ V KG+PY+ T+D RTIRYP+P IK +DT+ +D+ KIT F+ D GN+
Sbjct: 121 YKLCKVKKVATAPKGVPYLVTHDARTIRYPNPDIKVHDTVVVDIASGKITGFVHLDSGNM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGG N GRVG + +RE+H GSF+ IH++DALGH FATRL NVF IG+ +KP VSLP+
Sbjct: 181 CMITGGHNLGRVGTVMHRERHPGSFDIIHVKDALGHTFATRLSNVFIIGQANKPMVSLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGIKL+I EE +R A +
Sbjct: 241 GKGIKLTIAEERDRRLATK 259
>gi|326471544|gb|EGD95553.1| 40S ribosomal protein S4 [Trichophyton tonsurans CBS 112818]
gi|326481846|gb|EGE05856.1| 40S ribosomal protein S4 [Trichophyton equinum CBS 127.97]
Length = 259
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 170/257 (66%), Positives = 207/257 (80%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ILMQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TNSILMQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ KITDF+KFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPSIRVNDTVKIDIATGKITDFVKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPWVSLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWVSLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|189202048|ref|XP_001937360.1| 40S ribosomal protein S4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330932938|ref|XP_003303979.1| 40S ribosomal protein S4 [Pyrenophora teres f. teres 0-1]
gi|187984459|gb|EDU49947.1| 40S ribosomal protein S4-B [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311319705|gb|EFQ87929.1| hypothetical protein PTT_16383 [Pyrenophora teres f. teres 0-1]
Length = 262
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 174/262 (66%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KH KRL+AP HW+LDKL GA+APK S GPHK R+ LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPVKHQKRLSAPNHWLLDKLSGAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQR V VDGKVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H + DEEA+
Sbjct: 61 VNAILMQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL KI+DFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKVDLTTGKISDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+I +RE+H G F +HI+DA+ +EF TR NV IGK KPW+SLPK
Sbjct: 181 VMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAYAIAG 261
>gi|71000467|ref|XP_754922.1| 40S ribosomal protein S4 [Aspergillus fumigatus Af293]
gi|66852559|gb|EAL92884.1| 40S ribosomal protein S4, putative [Aspergillus fumigatus Af293]
gi|159127935|gb|EDP53050.1| 40S ribosomal protein S4, putative [Aspergillus fumigatus A1163]
Length = 261
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 168/261 (64%), Positives = 207/261 (79%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIMMQRLIKVDGKVRTDPTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KITDF++FD G +
Sbjct: 121 YKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFVRFDTGVV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVGII +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 CMVTGGRNMGRVGIITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KL+I EE +R+A A
Sbjct: 240 GKGVKLTIAEERDRRRAYALA 260
>gi|426243307|ref|XP_004015500.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
Length = 251
Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 207/262 (79%), Gaps = 12/262 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NR++H GSF+ +H++DA G+ F G+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRKRHPGSFDVVHVKDANGNSF------------GNKPWISLPR 228
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 229 GKGIRLTIAEERDKRLAAKQSS 250
>gi|392576968|gb|EIW70098.1| hypothetical protein TREMEDRAFT_43729 [Tremella mesenterica DSM
1558]
Length = 263
Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 168/248 (67%), Positives = 199/248 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP WMLDKLGG +AP+PS GPHK RECLPL +VLRNRLKYALT +E
Sbjct: 1 MGRGPKKHLKRLAAPSSWMLDKLGGTYAPRPSPGPHKLRECLPLTVVLRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V +I+MQR + VDGKVRTD+TYP GFMDV++I ++ ENFRLLYD KGRF +H + EEA
Sbjct: 61 VTSIVMQRTIKVDGKVRTDETYPTGFMDVITIDRSGENFRLLYDVKGRFTVHRISPEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVR Q G KG+PY+ T+DGRTIRYPDP IK NDTIK D +NK+ IKF+VGN+
Sbjct: 121 FKLCKVRKHQLGPKGVPYVVTHDGRTIRYPDPAIKVNDTIKYDFVQNKVVGIIKFEVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GR G+I +RE+H G F+ +H++D L FATRL N+F IG+GSK VSLPK
Sbjct: 181 VMVTGGRNMGRSGVIVHRERHLGGFDIVHVRDVLDRTFATRLSNIFVIGEGSKVQVSLPK 240
Query: 241 GKGIKLSI 248
GKG+KLSI
Sbjct: 241 GKGVKLSI 248
>gi|451852241|gb|EMD65536.1| hypothetical protein COCSADRAFT_35575 [Cochliobolus sativus ND90Pr]
Length = 262
Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 174/262 (66%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KH KRL+AP HW+LDKL GA+APK S GPHK R+ LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPVKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQR V VDGKVRTD T+P G MDV+SI KT ENFRL+YDTKGRF +H + DEEA+
Sbjct: 61 VNAILMQRLVKVDGKVRTDSTFPTGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL KI+DFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKVDLSTGKISDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+I +RE+H G F +HI+DA+ +EF TR NV IGK KPW+SLPK
Sbjct: 181 VMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAYALAG 261
>gi|169595016|ref|XP_001790932.1| hypothetical protein SNOG_00241 [Phaeosphaeria nodorum SN15]
gi|111070616|gb|EAT91736.1| hypothetical protein SNOG_00241 [Phaeosphaeria nodorum SN15]
Length = 262
Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+APK S GPHK R+ LPL++ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AILMQR V VDGKVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H + DEEA+
Sbjct: 61 VNAILMQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL K++DFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKIDLSTGKVSDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+I +RE+H G F +H++DA+ +EF TR NV IGK KPW+SLPK
Sbjct: 181 VMVTGGRNMGRVGVITHRERHDGGFNIVHLKDAVDNEFTTRETNVIVIGK-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAYALAG 261
>gi|149287204|gb|ABR23501.1| ribosomal protein S4 [Ornithodoros parkeri]
Length = 262
Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 170/260 (65%), Positives = 207/260 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL+APK WMLDKLGG FAP+PS+GPHK RE LPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLHAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + VD KVRTD YPAGFMDV++I KT E FRLLYD KGRF LH + EEAK
Sbjct: 61 VKKIVKQRLIKVDHKVRTDTNYPAGFMDVITIEKTGEFFRLLYDVKGRFVLHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+D KI D+IKFD GN+
Sbjct: 121 YKLCRVKRVQVGPKGVPFLVTHDARTIRYPDPLIKVNDTVKVDQATGKIDDYIKFDSGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GRVG I +RE+H GSF+ +H++D+ GH FATRL +F IGKG+KP++SLP+
Sbjct: 181 CMVTGGHNLGRVGTIMSRERHPGSFDIVHVKDSQGHTFATRLSYIFIIGKGTKPYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KLS+ EE +R +A
Sbjct: 241 GKGVKLSVAEERDRRLQIKA 260
>gi|340372095|ref|XP_003384580.1| PREDICTED: 40S ribosomal protein S4-like [Amphimedon queenslandica]
Length = 262
Score = 359 bits (921), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 173/260 (66%), Positives = 206/260 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR NAPKHWMLDK G +AP+PS GPHK REC+PL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRPNAPKHWMLDKFSGRYAPRPSPGPHKLRECIPLMVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR + VDGKVRTD T+PAG MDVV+I KT+E FRLLYD KGRF +H + EEAK
Sbjct: 61 VKKIVKQRLIKVDGKVRTDTTFPAGLMDVVTIEKTSEQFRLLYDVKGRFCVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ Q G KGIPY+ T+DGRTIRYPDPLIK NDT+++D+ KITDF+KFDVGN+
Sbjct: 121 YKLGKVKRAQLGPKGIPYLVTHDGRTIRYPDPLIKVNDTVRIDIATGKITDFVKFDVGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMV GGRN GRVG+I NRE+H GSF+ IHI+DA G+ FATR NVF IGK +K +SLPK
Sbjct: 181 VMVVGGRNLGRVGVITNRERHHGSFDIIHIKDAKGNTFATRQTNVFVIGKNNKALISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
KGI+L+I EE +R A+
Sbjct: 241 AKGIRLTIAEERDRRLQAKG 260
>gi|296804264|ref|XP_002842984.1| 40S ribosomal protein S4 [Arthroderma otae CBS 113480]
gi|238845586|gb|EEQ35248.1| 40S ribosomal protein S4 [Arthroderma otae CBS 113480]
Length = 259
Score = 359 bits (921), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 170/257 (66%), Positives = 207/257 (80%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ILMQR V VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TNSILMQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQTEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPNIRVNDTVKIDIATGKITDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H+G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHEGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|359496057|ref|XP_003635141.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4-like
[Vitis vinifera]
Length = 205
Score = 359 bits (921), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 173/204 (84%), Positives = 186/204 (91%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA+GLKKHLKRLNAPKHWM DKLGGAFAPKPS P KS E LPLIL+L NRLKYALTYRE
Sbjct: 1 MAKGLKKHLKRLNAPKHWMFDKLGGAFAPKPSYRPQKSWERLPLILILWNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQ+HV VDGKVR DKTYP+GFMDVVSIPK N+NFRLLYDTKGRF LH +R+EEAK
Sbjct: 61 VIAILMQQHVFVDGKVRIDKTYPSGFMDVVSIPKKNKNFRLLYDTKGRFXLHLVRNEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL KV SVQ GQKGIPY+NTYD RTIRYP+PLIKANDT KLDL+ NKITDFIKFDVGN+
Sbjct: 121 FKLWKVXSVQLGQKGIPYLNTYDERTIRYPNPLIKANDTTKLDLKSNKITDFIKFDVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGS 204
VMVTGGRNRGRVG+IKNREKHKG+
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGN 204
>gi|156035911|ref|XP_001586067.1| 40S ribosomal protein S4 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154698564|gb|EDN98302.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 262
Score = 359 bits (921), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+ S+GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPNHWLLDKLSGAYAPRASAGPHKLRDCMPLIVFIRNRLKYALNSRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR + VDGKVRTD TYPAGFMDV+ I KT+ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAILMQRLIKVDGKVRTDATYPAGFMDVIGIEKTSENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KITDFIKFD G I
Sbjct: 121 YKLAKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIG-AEKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KL+I EE +R+A A
Sbjct: 240 GKGVKLTIAEERDRRRAHAIAG 261
>gi|121704880|ref|XP_001270703.1| 40S ribosomal protein S4 [Aspergillus clavatus NRRL 1]
gi|119398849|gb|EAW09277.1| 40S ribosomal protein S4, putative [Aspergillus clavatus NRRL 1]
Length = 261
Score = 359 bits (921), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 168/261 (64%), Positives = 207/261 (79%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDVV I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIMMQRLIQVDGKVRTDPTYPAGFMDVVGIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KIT+F++FD G +
Sbjct: 121 YKLCKVKKVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITEFVRFDTGVV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 VMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAHTIA 260
>gi|258573501|ref|XP_002540932.1| 40S ribosomal protein S4 [Uncinocarpus reesii 1704]
gi|237901198|gb|EEP75599.1| 40S ribosomal protein S4 [Uncinocarpus reesii 1704]
Length = 262
Score = 358 bits (920), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD T+P GFMDV+SI KT ENFRL+YDTKGRF +H + EEA+
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTFPTGFMDVISIEKTGENFRLVYDTKGRFTVHRISGEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KI+DFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKISDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H+G F +HI+DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 CMVTGGRNMGRVGVITHRERHEGGFGIVHIKDAIDNSFATRESNVFVIGH-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAVALAG 261
>gi|312371216|gb|EFR19456.1| hypothetical protein AND_22381 [Anopheles darlingi]
Length = 262
Score = 358 bits (920), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 167/261 (63%), Positives = 206/261 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQRH+ +DG+VRTD YPAGFMDV++I KT ENFRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRHIKIDGRVRTDPNYPAGFMDVINIEKTGENFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G K +P++ T+DGRTIRYPDP I ND+I+ D+ K+ + +KF+ GN+
Sbjct: 121 YKLLKVKRVQIGPKKVPFLLTHDGRTIRYPDPAIHQNDSIQYDIATGKVMEVLKFEPGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GR G + REKH GSFE +H++DA GH FATRL NVF IGKG+K ++SLPK
Sbjct: 181 CMITGGRNLGRCGTVMQREKHPGSFEIVHVKDATGHTFATRLSNVFIIGKGTKAFISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE +R A +AA
Sbjct: 241 GKGVKLSISEERDRRLANKAA 261
>gi|440894131|gb|ELR46663.1| hypothetical protein M91_05049, partial [Bos grunniens mutus]
Length = 258
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 168/257 (65%), Positives = 204/257 (79%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KK LK + APKHWMLDKL G FAP+PS+GPHK RECLPLI LRNRLKYALT EV I
Sbjct: 2 KKPLKCVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLITFLRNRLKYALTGDEVKKIC 61
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQ + +DGKVRTD TYPAGFMDV+ I KT ENFRL+ DTKGRF +H + +EAK+KLCK
Sbjct: 62 MQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLICDTKGRFAVHRITPQEAKYKLCK 121
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
VR + G KGIP++ T+D R IRYPDPLIK NDTI++DLE KI DFIKFD GN+ MVTG
Sbjct: 122 VRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTG 181
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
G N GR+G+I NRE+H GSF+ +H++DA G+ FAT+L N+F GKG+KPW+SLP+GKGI+
Sbjct: 182 GANLGRIGVISNRERHLGSFDVVHVKDANGNSFATQLSNIFVTGKGNKPWISLPRGKGIR 241
Query: 246 LSIIEEARKRQAAQAAA 262
L+I EE KR AA+ ++
Sbjct: 242 LTIAEERDKRLAAKQSS 258
>gi|361125389|gb|EHK97435.1| putative 40S ribosomal protein S4-B [Glarea lozoyensis 74030]
Length = 262
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 208/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS+GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSAGPHKLRDCMPLIVFIRNRLKYALNSRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIVMQRLIKVDGKVRTDATYPAGFMDVISIEKTGEHFRLVYDTKGRFTVHRIQTEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KITDFIKFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPK
Sbjct: 181 AMVTGGRNIGRVGVITHRERHDGGFNIVHIKDAIDNSFATRENNVFVIGS-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KL+I EE +R+A A
Sbjct: 240 GKGVKLTIAEERDRRRAHAIAG 261
>gi|389646755|ref|XP_003721009.1| 40S ribosomal protein S4-A [Magnaporthe oryzae 70-15]
gi|86196449|gb|EAQ71087.1| hypothetical protein MGCH7_ch7g494 [Magnaporthe oryzae 70-15]
gi|351638401|gb|EHA46266.1| 40S ribosomal protein S4-A [Magnaporthe oryzae 70-15]
Length = 262
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL AP HW+LDKL G +APKPS GPHK RECLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLAAPSHWLLDKLSGTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDVVSI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAILMQRLVKVDGKVRTDSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K++L+ KITDFIKFD G +
Sbjct: 121 YKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGAL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVT G N GRVG+I +RE+H G F +H++DA+ + F TR NVF IG KPW+SLPK
Sbjct: 181 AMVTAGNNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KL+I EE +R+A A
Sbjct: 240 GKGVKLTIAEERDRRRAQTIAG 261
>gi|431914424|gb|ELK15681.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 245
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DVTYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITTEEAKYKLCKVRKIFVGTKGIPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 240
Query: 259 QAAA 262
+ ++
Sbjct: 241 KQSS 244
>gi|226469686|emb|CAX76673.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 168/258 (65%), Positives = 204/258 (79%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG +KHLKRLNA KHWMLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNASKHWMLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL QR V VDG+VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR V G G+P+I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+
Sbjct: 123 KLCKVRKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMC 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK
Sbjct: 183 MVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKS 242
Query: 242 KGIKLSIIEEARKRQAAQ 259
+GI+LSIIEE KR A+
Sbjct: 243 RGIRLSIIEERDKRIRAR 260
>gi|296424161|ref|XP_002841618.1| 40S ribosomal protein S4 [Tuber melanosporum Mel28]
gi|295637863|emb|CAZ85809.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 164/254 (64%), Positives = 203/254 (79%), Gaps = 1/254 (0%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIA 63
G KKHLKRLNAP HW+LDKL G +AP+PS GPHK R+C+PL++ +RNRLKYAL REV A
Sbjct: 86 GPKKHLKRLNAPSHWLLDKLSGKYAPRPSPGPHKLRDCMPLVVFIRNRLKYALNSREVKA 145
Query: 64 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 123
I+MQR V VDGKVRTD T+PAGFMDV++I KT E FRL+YDTKGRF +H + + EA +KL
Sbjct: 146 IVMQRLVKVDGKVRTDPTFPAGFMDVITIEKTGERFRLIYDTKGRFTIHRITETEASYKL 205
Query: 124 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
KV+ VQ G KGIPY+ T+D RTIRYPDP I+ NDT+K+D+E KI DFI+FD G I M
Sbjct: 206 AKVKRVQLGAKGIPYLVTHDARTIRYPDPTIRVNDTVKIDIETGKIIDFIRFDTGTIAMA 265
Query: 184 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 243
TGGRN GRVG+I +RE+H G F+ +HI+DA+ + FATRL NVF +G KPW+SLPKGKG
Sbjct: 266 TGGRNMGRVGVITHRERHDGGFDIVHIKDAIDNTFATRLSNVFIVGP-DKPWISLPKGKG 324
Query: 244 IKLSIIEEARKRQA 257
+KL+I EE +R+A
Sbjct: 325 VKLTIAEERDRRRA 338
>gi|348666498|gb|EGZ06325.1| hypothetical protein PHYSODRAFT_356144 [Phytophthora sojae]
Length = 261
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 168/251 (66%), Positives = 204/251 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG +KHLKR++APKHWML KL G +AP+PSSGPHK RECLPLI++LRNRLKYALT +E
Sbjct: 1 MPRGPRKHLKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ+ V VDGKVR D +PAGFMDVV +PKT + FRLLYDTKGRF LH + DEE K
Sbjct: 61 VTMICMQKSVKVDGKVRVDPDFPAGFMDVVELPKTGDQFRLLYDTKGRFVLHRISDEEKK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL KV ++ +K IPYI T DGRTIRYPDPLIK DT+K+DLE K+ D IKF+VGN+
Sbjct: 121 FKLAKVIRQEYTKKAIPYIATNDGRTIRYPDPLIKVGDTVKIDLETGKVVDHIKFEVGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V +T GRN GRVGI+ + E+H+GSF H++D+ G++FATRLGNVF +GK ++PWVSLPK
Sbjct: 181 VTITRGRNSGRVGILHHIERHQGSFNIAHVKDSAGNDFATRLGNVFAVGKEARPWVSLPK 240
Query: 241 GKGIKLSIIEE 251
GKGIKL+I+EE
Sbjct: 241 GKGIKLNILEE 251
>gi|353240563|emb|CCA72427.1| probable ribosomal protein S4.e, cytosolic [Piriformospora indica
DSM 11827]
Length = 262
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 168/260 (64%), Positives = 204/260 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKLGG +AP+PS GPHK RE LPL + LR RL+YALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLGGTYAPRPSPGPHKLRESLPLTIFLRRRLQYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL QR V VDGKVRTD YP GF DV++I K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTTILAQRLVKVDGKVRTDIKYPVGFQDVITIEKSGEHFRLLYDVKGRFAIHRITPEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ V G +G+PYI T+DGRTIRYPDP IK NDT+K DLE+ KIT F+KFD GN+
Sbjct: 121 YKLCKVKKVLIGNRGVPYIVTHDGRTIRYPDPDIKTNDTVKYDLEQGKITGFVKFDTGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V+VTGGRN GRVG I +RE+H G F+ +H++D L FATR+ N+F IG+G+KPW+SLPK
Sbjct: 181 VVVTGGRNMGRVGTITHRERHIGGFDIVHVKDVLDRTFATRVTNIFVIGEGTKPWISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KL+I EE +R+ A+A
Sbjct: 241 GKGVKLTISEERDQRRRAKA 260
>gi|307178149|gb|EFN66957.1| 40S ribosomal protein S4 [Camponotus floridanus]
Length = 261
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/260 (65%), Positives = 204/260 (78%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+MQR + VDGK+R D YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+
Sbjct: 61 TKIVMQRLIKVDGKIRIDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKY 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ KI D I+FD GN+
Sbjct: 121 KLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIASGKILDSIRFDSGNLC 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M+TGGRN GRVG + +RE+H GSF+ HI+D GH FATRL NVF IGKG+K +VSLP+
Sbjct: 181 MITGGRNLGRVGTVVSRERHPGSFDICHIKDTQGHTFATRLNNVFIIGKGTKAYVSLPRD 240
Query: 242 KGIKLSIIEEARKRQAAQAA 261
+G+KLSI EE KR AA+
Sbjct: 241 RGVKLSIAEERDKRLAAKGV 260
>gi|402910524|ref|XP_003917924.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Papio anubis]
gi|12846200|dbj|BAB27070.1| unnamed protein product [Mus musculus]
Length = 245
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 240
Query: 259 QAAA 262
+ ++
Sbjct: 241 KQSS 244
>gi|259482360|tpe|CBF76769.1| TPA: 40S ribosomal protein S4, putative (AFU_orthologue;
AFUA_3G06840) [Aspergillus nidulans FGSC A4]
Length = 261
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 165/261 (63%), Positives = 206/261 (78%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIMMQRLIQVDGKVRTDPTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KITDF +FD G +
Sbjct: 121 YKLCKVKKVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFCRFDTGVV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG++ +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 CMVTGGRNMGRVGVVTHRERHDGGFNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAYALA 260
>gi|315047114|ref|XP_003172932.1| 40S ribosomal protein S4 [Arthroderma gypseum CBS 118893]
gi|311343318|gb|EFR02521.1| 40S ribosomal protein S4 [Arthroderma gypseum CBS 118893]
Length = 259
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 168/257 (65%), Positives = 206/257 (80%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ILMQR V VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TNSILMQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ KITD++KFD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPSIRVNDTVKIDIATGKITDYVKFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA 257
GKG+KL+I EE +R+A
Sbjct: 240 GKGVKLTIAEERDRRRA 256
>gi|119493023|ref|XP_001263767.1| 40S ribosomal protein S4 [Neosartorya fischeri NRRL 181]
gi|119411927|gb|EAW21870.1| 40S ribosomal protein S4, putative [Neosartorya fischeri NRRL 181]
Length = 261
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 166/261 (63%), Positives = 206/261 (78%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIMMQRLIKVDGKVRTDPTYPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KITDF++FD G +
Sbjct: 121 YKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFVRFDTGVV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 CMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KL+I EE +R+A A
Sbjct: 240 GKGVKLTIAEERDRRRAYALA 260
>gi|167526949|ref|XP_001747807.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773556|gb|EDQ87194.1| predicted protein [Monosiga brevicollis MX1]
Length = 264
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 164/264 (62%), Positives = 207/264 (78%), Gaps = 2/264 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APKHWMLDKL G +AP+PS+GPHK RECLPL++ LRNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLAAPKHWMLDKLTGRYAPRPSTGPHKLRECLPLVIFLRNRLKYALTYHE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL QR V VDGK RTD T+P G MDV+SIP TNE+FRLL+DTKGR+ +H ++D+EA
Sbjct: 61 VKMILKQRKVYVDGKARTDLTFPTGLMDVISIPDTNEHFRLLFDTKGRYTVHKIQDDEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV+ G +PY+ T+DGRTIRYPDP IK NDT+K+DL+ +ITDFIKFD+G +
Sbjct: 121 FKLCKVKQAAIGPNAVPYVVTHDGRTIRYPDPHIKVNDTVKVDLDSGRITDFIKFDIGVL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V+ TGGRN GRVG + +R+K G+ + +H++D+ G +F T L NVF +G G KP +SLP+
Sbjct: 181 VLCTGGRNMGRVGTLMSRDKMMGATDVVHVRDSAGQQFTTLLSNVFAVGSGKKPAISLPR 240
Query: 241 GKGIKLSIIEEARKR--QAAQAAA 262
GKG++L+I EE +R A+AAA
Sbjct: 241 GKGVRLTIAEERDRRLKDKAKAAA 264
>gi|145286314|gb|ABP52061.1| ribosomal protein s4a [Ancylostoma caninum]
Length = 261
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 202/261 (77%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL PKHWMLDKLGG FA +P SGPHK RECLPL L LRNRLKYAL Y E
Sbjct: 1 MARGPKKHLKRLATPKHWMLDKLGGVFAVRPRSGPHKLRECLPLNLFLRNRLKYALNYAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL QR + VDGK+RTD +PAGFMDV+SI +TNE FRLLYD KGR+ +H + E +
Sbjct: 61 VKKILRQRVIKVDGKIRTDHKFPAGFMDVISIERTNETFRLLYDVKGRYTVHRITAAEGQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV+++ ++ IPYI T DGRTIRYPDP IK NDT+ +DL NKITD++KF+ GN+
Sbjct: 121 FKLCKVKALHVAKQNIPYITTNDGRTIRYPDPHIKVNDTVVIDLSSNKITDYVKFEAGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG+I +REK G+F+ IH++DA GH FATR+ NVF IGKG+K VSLP
Sbjct: 181 AMITGGRNVGRVGVIGHREKLPGAFDIIHVKDAAGHSFATRVSNVFVIGKGNKALVSLPA 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
KGI+L+I EE KR A + A
Sbjct: 241 AKGIRLTIAEERDKRLAQKKA 261
>gi|452987335|gb|EME87091.1| hypothetical protein MYCFIDRAFT_162640 [Pseudocercospora fijiensis
CIRAD86]
Length = 262
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 170/261 (65%), Positives = 207/261 (79%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+APK S GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + +EEA+
Sbjct: 61 VKQIVMQRLIKVDGKVRTDPTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRITEEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K++LE KI DFI+FD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVNLETGKIDDFIRFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRETNVFVIGR-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAYALA 260
>gi|208657539|gb|ACI30066.1| ribosomal protein S4 [Anopheles darlingi]
Length = 262
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 166/261 (63%), Positives = 205/261 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQ H+ +DG+VRTD YPAGFMDV++I KT ENFRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQHHIKIDGRVRTDPNYPAGFMDVINIEKTGENFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G K +P++ T+DGRTIRYPDP I ND+I+ D+ K+ + +KF+ GN+
Sbjct: 121 YKLLKVKRVQIGPKKVPFLLTHDGRTIRYPDPAIHQNDSIQYDIATGKVMEVLKFEPGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GR G + REKH GSFE +H++DA GH FATRL NVF IGKG+K ++SLPK
Sbjct: 181 CMITGGRNLGRCGTVMQREKHPGSFEIVHVKDATGHTFATRLSNVFIIGKGTKAFISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KLSI EE +R A +AA
Sbjct: 241 GKGVKLSISEERDRRLANKAA 261
>gi|452837123|gb|EME39066.1| ribosomal protein S4e-like protein [Dothistroma septosporum NZE10]
Length = 262
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+APK S GPHK R+C+PL++ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKLRDCMPLVVFIRNRLKYALNTRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEA+
Sbjct: 61 TKAIVMQRLIKVDGKVRTDPTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRITTEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K++LE KI DFI+FD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIRVNDTVKINLETGKIEDFIRFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KLSI EE +R+A A
Sbjct: 240 GKGVKLSIAEERDRRRAHALAG 261
>gi|145245281|ref|XP_001394908.1| 40S ribosomal protein S4 [Aspergillus niger CBS 513.88]
gi|134079606|emb|CAK40823.1| unnamed protein product [Aspergillus niger]
gi|350631620|gb|EHA19991.1| hypothetical protein ASPNIDRAFT_199495 [Aspergillus niger ATCC
1015]
gi|358369177|dbj|GAA85792.1| 40S ribosomal protein S4 [Aspergillus kawachii IFO 4308]
Length = 258
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 165/259 (63%), Positives = 204/259 (78%), Gaps = 1/259 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAIMMQRLIKVDGKVRTDPTYPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KI DF+KFD G +
Sbjct: 121 YKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKIADFVKFDTGVV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG++ +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVVTHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-DKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKG+KLSI EE +R+A Q
Sbjct: 240 GKGVKLSIAEERDRRRALQ 258
>gi|395514460|ref|XP_003761435.1| PREDICTED: 40S ribosomal protein S4-like [Sarcophilus harrisii]
Length = 263
Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 166/262 (63%), Positives = 205/262 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KK LK + APKHWMLDKL G FAP+PS+G HK +ECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKLLKCVAAPKHWMLDKLTGVFAPRPSTGSHKLKECLPLIIFLRNRLKYALTEDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ + +DGK+ TD TYPAGFMDV+SI K E+F L+YDTKG F +H + E AK
Sbjct: 61 VKKICMQHFIKIDGKIHTDITYPAGFMDVISIEKMGEHFHLVYDTKGCFAVHHITVEAAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCK R + G KGIP++ T+D R IRYPDPLIK NDT+++DLE+ KITDFIKFD N+
Sbjct: 121 YKLCKARKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTVQIDLEDGKITDFIKFDTSNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+S P+
Sbjct: 181 CMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISPPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 241 GKGIRLTIAEERDKRLAAKQSS 262
>gi|392495106|gb|AFM74216.1| 40S ribosomal protein S4-like protein [Spirometra erinaceieuropaei]
Length = 264
Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 166/258 (64%), Positives = 203/258 (78%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG++KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E
Sbjct: 3 VRGIRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLAIFLRNRLKYALTYDEC 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL QR V VDG+VRTD+ +PAGFMDV+SI +TNE+FRL+YDTK RF +H + EEAK+
Sbjct: 63 TKILKQRLVKVDGRVRTDRKFPAGFMDVISIDRTNEHFRLIYDTKKRFAIHRIHPEEAKY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCK+R V G +PYI T+D RTIRYPDP IK NDT+++D K+ +FIKF+ GN+
Sbjct: 123 KLCKIRKVLTGPGNVPYIVTHDARTIRYPDPEIKVNDTVQIDRATGKVLNFIKFEPGNVC 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGG N GRVG+I E+H GS E +H++D GH+F TRL N+F IGK +K WVSLPKG
Sbjct: 183 MVTGGHNLGRVGVITQWERHPGSVEMVHVRDNTGHQFVTRLNNIFIIGKSNKAWVSLPKG 242
Query: 242 KGIKLSIIEEARKRQAAQ 259
KGI+LSI+EE +R A+
Sbjct: 243 KGIRLSILEERDRRLRAK 260
>gi|453079891|gb|EMF07943.1| 40S ribosomal protein S4 [Mycosphaerella populorum SO2202]
Length = 261
Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 209/261 (80%), Gaps = 2/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++APK S GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAG+MDV++I KT ENFRL+YDTKGRF +H + +EEA+
Sbjct: 61 TKAIVMQRLIKVDGKVRTDPTYPAGYMDVITIEKTGENFRLVYDTKGRFTVHRITEEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K++LE KI DFI+FD G I
Sbjct: 121 YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVNLETGKIDDFIRFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQA-AQA 260
GKG+KLSI EE +R+A AQA
Sbjct: 240 GKGVKLSIAEERDRRRAYAQA 260
>gi|334184265|ref|NP_001189539.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
gi|330251523|gb|AEC06617.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
Length = 184
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/181 (91%), Positives = 176/181 (97%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVG
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKC 180
Query: 181 V 181
V
Sbjct: 181 V 181
>gi|405967288|gb|EKC32468.1| 40S ribosomal protein S4, X isoform [Crassostrea gigas]
Length = 243
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/243 (67%), Positives = 198/243 (81%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGG FAP+PS+GPHK RE LPLI+ LRNRLKYALTY EV I MQR + VD KVRT
Sbjct: 1 MLDKLGGVFAPRPSTGPHKLRESLPLIVFLRNRLKYALTYDEVKKITMQRLIKVDAKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
DK +P GFMDV+SI KTNENFRLLYD KGRF +H ++ EEAK+KLC+VR V KG+PY
Sbjct: 61 DKNFPTGFMDVISIEKTNENFRLLYDVKGRFTVHRIQKEEAKYKLCRVRKVGVAAKGVPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
I T+DGRTIRYPDPL+K NDT+ LD+ KI DFIKFD GN+ MVTGG N GRVG+I++R
Sbjct: 121 ITTHDGRTIRYPDPLVKVNDTVMLDIGTGKIKDFIKFDSGNLCMVTGGHNLGRVGVIQHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +HI+D++GH +ATRL VF IGKG+KPW+SLPKGKG+KLSI EE +R AA
Sbjct: 181 ERHPGSFDIVHIKDSVGHTYATRLSYVFVIGKGNKPWISLPKGKGVKLSIAEERDRRLAA 240
Query: 259 QAA 261
+ +
Sbjct: 241 KTS 243
>gi|425780989|gb|EKV18971.1| 40S ribosomal protein S4, putative [Penicillium digitatum PHI26]
gi|425783252|gb|EKV21109.1| 40S ribosomal protein S4, putative [Penicillium digitatum Pd1]
Length = 260
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/259 (64%), Positives = 207/259 (79%), Gaps = 1/259 (0%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG KH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL REV
Sbjct: 2 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVK 61
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
AI+MQR V VDGKVRTD TYPAGFMDV+S+ KT E+FRL+YDTKGRF +H ++ EEA++K
Sbjct: 62 AIMMQRLVKVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
LCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KI DF+KFD G ++M
Sbjct: 122 LCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIM 181
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
TGGRN GRVG+I +RE+H G F +H++DAL ++FATR NVF IG+ KPWVSLPKGK
Sbjct: 182 ATGGRNMGRVGVITHRERHDGGFNIVHVRDALDNQFATRESNVFVIGQ-DKPWVSLPKGK 240
Query: 243 GIKLSIIEEARKRQAAQAA 261
G+KLSI EE +R+A + A
Sbjct: 241 GVKLSIAEERDRRRAHELA 259
>gi|326432455|gb|EGD78025.1| ribosomal protein s4 X isoform [Salpingoeca sp. ATCC 50818]
Length = 263
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/260 (63%), Positives = 206/260 (79%), Gaps = 1/260 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAP+HWMLDKL G FAP+PS+GPHK RECLPL++ +RNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLNAPRHWMLDKLSGRFAPRPSTGPHKLRECLPLVIFIRNRLKYALTYHE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I +R++ VDGKVRTD TYPAGFMDV+SIPKTNENFRLLYD KGR+ +H + D EAK
Sbjct: 61 VKMITKERNIKVDGKVRTDMTYPAGFMDVISIPKTNENFRLLYDAKGRYTVHRIDDAEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV G +G+P + T+D RTIRYPDP IK +D++K+DLE +IT+F+KFD +
Sbjct: 121 YKLCKVTKTFVGPRGVPMVVTHDARTIRYPDPHIKVHDSVKVDLETGRITEFVKFDNNML 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GRVG I +R++H G F+ + ++DA GH+FATRL N+F IG KP VSLPK
Sbjct: 181 AMITGGRNMGRVGTIVHRDRHLGGFDIVTLRDANGHQFATRLSNIFVIGD-KKPLVSLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQA 260
GKG+KL+I EE +R +A
Sbjct: 240 GKGVKLTIAEERDRRMEQKA 259
>gi|401888387|gb|EJT52345.1| hypothetical protein A1Q1_04556 [Trichosporon asahii var. asahii
CBS 2479]
gi|406696387|gb|EKC99677.1| hypothetical protein A1Q2_05987 [Trichosporon asahii var. asahii
CBS 8904]
Length = 262
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP WMLDKLGG +AP+PS GPHK RE LPL + LRNR+KYALT +E
Sbjct: 1 MGRGPKKHLKRLAAPSSWMLDKLGGTYAPRPSPGPHKLRESLPLTVFLRNRMKYALTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+ QR + VDGKVRTD+T+PAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTAIVKQRLIQVDGKVRTDETFPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV+ Q G KG+PY+ T+DGRTIRYPDP IK NDTIK D ++NKIT +KF+ GN+
Sbjct: 121 FKLCKVKKCQLGAKGVPYVVTHDGRTIRYPDPNIKVNDTIKFDFQQNKITGHLKFEPGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGGRN GR G+I ++E+H G F+ +H++D L FATR+GNVF IG+G+K VSLPK
Sbjct: 181 VMITGGRNMGRSGVIVHKERHLGGFDIVHVRDVLDRTFATRIGNVFVIGEGAKAQVSLPK 240
Query: 241 GKGIKLSIIEE-ARKRQAAQAA 261
GKG+KL+I EE +KR+ Q A
Sbjct: 241 GKGVKLTITEERDQKRRQKQDA 262
>gi|392877236|gb|AFM87450.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 245
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 200/244 (81%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +H++D G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDVVHVKDTNGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 240
Query: 259 QAAA 262
+ ++
Sbjct: 241 KQSS 244
>gi|255944153|ref|XP_002562844.1| Pc20g02900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587579|emb|CAP85619.1| Pc20g02900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 260
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 166/259 (64%), Positives = 206/259 (79%), Gaps = 1/259 (0%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG KH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL REV
Sbjct: 2 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVK 61
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
AI+MQR V VDGKVRTD TYPAGFMDV+S+ KT E+FRL+YDTKGRF +H ++ EEA++K
Sbjct: 62 AIMMQRLVKVDGKVRTDTTYPAGFMDVISLEKTGEHFRLIYDTKGRFTVHRIQAEEAEYK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
LCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KI DF+KFD G ++M
Sbjct: 122 LCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIM 181
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
TGGRN GRVG+I +RE+H G F +H++DAL ++FATR NVF IG+ KPWVSLPKGK
Sbjct: 182 ATGGRNMGRVGVITHRERHDGGFNIVHVRDALDNQFATRESNVFVIGQ-DKPWVSLPKGK 240
Query: 243 GIKLSIIEEARKRQAAQAA 261
G+KLSI EE +R+A A
Sbjct: 241 GVKLSIAEERDRRRAHDLA 259
>gi|354683887|gb|AER35072.1| 40S ribosomal protein S4 [Dictyostelium lacteum]
Length = 267
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/251 (66%), Positives = 200/251 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
+ARG KKHLKRL AP HWMLDKL G+FAP+PSSGPHK RECLPLIL+LRNRLKYALT +E
Sbjct: 1 IARGPKKHLKRLAAPSHWMLDKLSGSFAPRPSSGPHKIRECLPLILILRNRLKYALTKKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQRH+ VDGKVRTD +PAGFMDVV I +T E+FRLLYD KGRF L + EEAK
Sbjct: 61 VTLILMQRHLRVDGKVRTDPNFPAGFMDVVQIKETKEDFRLLYDPKGRFTLQRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL +V V+ G +GIPY++T DGRTIRYPDP IK +DT+K+D+ KIT FI F+V N+
Sbjct: 121 FKLARVTKVETGNQGIPYVHTDDGRTIRYPDPSIKIHDTVKIDIASGKITSFIPFEVNNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+ GG N GRVG+I +REKH GSF+ +HI D++GH+FATRL NVF IGK + VSLP
Sbjct: 181 CMIVGGHNLGRVGVITSREKHPGSFDIVHITDSVGHQFATRLSNVFVIGKANHTLVSLPA 240
Query: 241 GKGIKLSIIEE 251
GKG++ S I+E
Sbjct: 241 GKGVRRSRIDE 251
>gi|440897387|gb|ELR49092.1| hypothetical protein M91_06956 [Bos grunniens mutus]
Length = 263
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/259 (64%), Positives = 205/259 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLK + APKHWML+KL G FAP+PS+ PHK RE LPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKCVAAPKHWMLEKLTGVFAPRPSTSPHKLREYLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKV TD TYPAGFMDV+SI KT ENF L+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFINIDGKVSTDITYPAGFMDVISIDKTRENFCLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + G KGIP++ T+D TI YP PLIK NDTI++DLE +ITDFIKFD GN+
Sbjct: 121 YKLCKVKKIFVGTKGIPHLVTHDAHTIHYPHPLIKVNDTIQIDLETGRITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I N+E+H GS + +H++D G+ FAT+L N+F IGKG+KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNQERHSGSSDVVHVKDVNGNSFATQLSNIFVIGKGNKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGI+L+I EE KR AA+
Sbjct: 241 GKGIRLTIAEERDKRLAAK 259
>gi|395754117|ref|XP_003780546.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, X isoform
[Pongo abelii]
Length = 319
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/263 (65%), Positives = 208/263 (79%), Gaps = 2/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G AP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 57 MARGPKKHLKRVAAPKHWMLDKLTGC-APRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 115
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDT-KGRFRLHSLRDEEA 119
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENF T + F +H + EEA
Sbjct: 116 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFPSGSMTPRVAFAVHRITPEEA 175
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
K+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN
Sbjct: 176 KYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGN 235
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+K W+SLP
Sbjct: 236 LCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKSWISLP 295
Query: 240 KGKGIKLSIIEEARKRQAAQAAA 262
+GKGI+L+I EE KR AA+ ++
Sbjct: 296 RGKGIRLTIAEERDKRLAAKQSS 318
>gi|432920855|ref|XP_004080004.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Oryzias
latipes]
Length = 245
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 199/244 (81%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAKYKLCKVRKIIIGTKGIPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVRIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 240
Query: 259 QAAA 262
+ +
Sbjct: 241 KQGS 244
>gi|1350992|sp|P47837.1|RS4_CANAL RecName: Full=40S ribosomal protein S4; AltName: Full=S7
gi|1051260|gb|AAC49871.1| ribosomal protein S7 [Candida albicans]
Length = 262
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 203/261 (77%), Gaps = 1/261 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP HWML KL G +AP+PS+GPH RE LPL + LRNRL YAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLXKLSGTYAPRPSAGPHXLRESLPLXVFLRNRLXYALCGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQ+HV V GKVRTD TYPAGFMDV+++ TNE+FRL YD KG+F +H + EEA
Sbjct: 61 VKAIMMQQHVQVVGKVRTDTTYPAGFMDVITLEATNEHFRLAYDVKGKFAVHRISAEEAV 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL KI FIKFD G +
Sbjct: 121 YKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIXSFIKFDTGRL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLP 239
VMVTGGRN GRVG+I +REK +G F+ +HI+DAL + F TRL NVF IG + KPWVSLP
Sbjct: 181 VMVTGGRNLGRVGVIVHREKLEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLP 240
Query: 240 KGKGIKLSIIEEARKRQAAQA 260
KGKGIKLSI EE +R A Q
Sbjct: 241 KGKGIKLSISEERDRRXAQQG 261
>gi|66823117|ref|XP_644913.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4]
gi|6226700|sp|P51405.3|RS4_DICDI RecName: Full=40S ribosomal protein S4
gi|3647233|gb|AAD04813.1| 40S ribosomal protein S4 [Dictyostelium discoideum]
gi|60473102|gb|EAL71050.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4]
Length = 267
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/251 (67%), Positives = 198/251 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PSSGPHK RECLPLILVLRNRLKYALT +E
Sbjct: 1 MARGPKKHLKRLAAPNHWMLDKLSGKWAPRPSSGPHKLRECLPLILVLRNRLKYALTKKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQR V VDGKVRTD YPAGFMDV+SI KT ENFRLL+D KGRF L + EEAK
Sbjct: 61 VTLILMQRLVKVDGKVRTDPNYPAGFMDVISIEKTKENFRLLFDPKGRFTLQRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL +V V+ G +GIPY++T DGRTIRYPDP I +DTIK+D+E KIT FI F+V N+
Sbjct: 121 FKLARVTRVETGNQGIPYVHTDDGRTIRYPDPAISIHDTIKIDIESGKITAFIPFEVNNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+ GG N GRVG + +REKH GSF+ +H+ D GH+FATRL NVF IGK S+ +VSLP
Sbjct: 181 CMIVGGHNLGRVGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPA 240
Query: 241 GKGIKLSIIEE 251
GKG++ S ++E
Sbjct: 241 GKGVRRSRVDE 251
>gi|48376549|gb|AAH07308.2| RPS4X protein, partial [Homo sapiens]
Length = 243
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 165/242 (68%), Positives = 199/242 (82%)
Query: 21 DKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDK 80
DKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 81 TYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYIN 140
TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 141 TYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 200
T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 180
Query: 201 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 260
H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+
Sbjct: 181 HPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQ 240
Query: 261 AA 262
++
Sbjct: 241 SS 242
>gi|28630198|gb|AAN77887.1| ribosomal protein S4 [Scyliorhinus canicula]
Length = 238
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 162/238 (68%), Positives = 198/238 (83%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHV 70
RL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR +
Sbjct: 1 RLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 60
Query: 71 LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQ 130
+DGKVRTD TYP G MDV+SI KT+E+FRL+YDTKGRF +H + EEAK+KLCKVR ++
Sbjct: 61 KIDGKVRTDITYPTGSMDVISIDKTSEHFRLIYDTKGRFAVHRITVEEAKYKLCKVRKIR 120
Query: 131 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 190
G KGIP++ T+D RTIRYPDPLIK NDT+++DL+ KITDFIKFD GN+ MV GG N G
Sbjct: 121 VGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLDTGKITDFIKFDTGNLCMVIGGANLG 180
Query: 191 RVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 248
R+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I
Sbjct: 181 RIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTI 238
>gi|44967243|gb|AAS49567.1| ribosomal protein S4 [Latimeria chalumnae]
Length = 238
Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 164/238 (68%), Positives = 195/238 (81%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHV 70
R+ AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR +
Sbjct: 1 RVAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 60
Query: 71 LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQ 130
+DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EE K+KLCKVR V
Sbjct: 61 KIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEETKYKLCKVRKVF 120
Query: 131 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 190
G KGIP++ T+D RTIRYPDPLIK NDT+++DL KITDFIKFD GN MV GG N G
Sbjct: 121 VGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLNTGKITDFIKFDTGNQCMVIGGANLG 180
Query: 191 RVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 248
RVG+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I
Sbjct: 181 RVGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 238
>gi|28630195|gb|AAN77886.1| ribosomal protein S4 [Myxine glutinosa]
Length = 238
Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 160/238 (67%), Positives = 196/238 (82%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHV 70
RL APKHWMLDKL G FAP+PS+GPH+ RECL LI+ LRNRL+YALTY EV I MQR +
Sbjct: 1 RLAAPKHWMLDKLTGVFAPRPSTGPHRLRECLSLIIFLRNRLRYALTYDEVKKICMQRLI 60
Query: 71 LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQ 130
+DGKVRTD TYPAGFMDV++I KT+ENFRL+YDTKGRF +H + EEAK+KLCK+R +
Sbjct: 61 KIDGKVRTDITYPAGFMDVITIDKTSENFRLIYDTKGRFAIHRITAEEAKYKLCKIRKRR 120
Query: 131 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 190
KGIP++ T+D RTIRYPDPLIK NDT++++LE KITDFIKF+ GN+ MVTGG N G
Sbjct: 121 VASKGIPFVVTHDARTIRYPDPLIKENDTVQVNLENGKITDFIKFETGNLCMVTGGANLG 180
Query: 191 RVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 248
RVGII +RE+H GSF+ +H++D G+ FATRLGN+F IGK K WVSLP+GKGI+L+I
Sbjct: 181 RVGIITSRERHPGSFDVVHVKDTAGNTFATRLGNIFVIGKAQKAWVSLPRGKGIRLTI 238
>gi|337930|gb|AAA36597.1| scar protein [Homo sapiens]
Length = 244
Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 200/244 (81%), Gaps = 1/244 (0%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 180 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 239
Query: 259 QAAA 262
+ ++
Sbjct: 240 KQSS 243
>gi|44967294|gb|AAS49568.1| ribosomal protein S4 [Protopterus dolloi]
Length = 238
Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 162/238 (68%), Positives = 197/238 (82%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHV 70
R+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR +
Sbjct: 1 RVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 60
Query: 71 LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQ 130
+DGKVRTD TYP+GFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR +
Sbjct: 61 KIDGKVRTDITYPSGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIF 120
Query: 131 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 190
KGIP++ T+D RTIRYPDPLIK NDT++++LE KITD IKFD GN+ MVTGG N G
Sbjct: 121 VRNKGIPHLVTHDARTIRYPDPLIKVNDTVQINLESGKITDMIKFDTGNLCMVTGGANLG 180
Query: 191 RVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 248
R+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I
Sbjct: 181 RIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTI 238
>gi|444516549|gb|ELV11206.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 258
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/259 (65%), Positives = 204/259 (78%), Gaps = 1/259 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G KKHLKR+ APKHWML KL G FAP+PS+GPHK RECL LI+ LRNRLKYALT E
Sbjct: 1 MAPGPKKHLKRVAAPKHWMLGKLTGVFAPRPSTGPHKLRECLSLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQWFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRVTPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G++ IP++ +D TIRYPDPLIK NDTI++ L+ KITDFIKFD GN+
Sbjct: 121 YKLCKVRKISVGKE-IPHLVPHDVLTIRYPDPLIKVNDTIQIYLKTGKITDFIKFDTGNL 179
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP
Sbjct: 180 CMVTGGANLGRIGVITNRERHPGSFDVVHMKDANGNSFATRLSNIFVIGKGNKPWISLPW 239
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGI+L+I EE Q +
Sbjct: 240 GKGIRLTIAEERDTEQWVK 258
>gi|357615430|gb|EHJ69651.1| 40S ribosomal protein S4 [Danaus plexippus]
Length = 245
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VDGKVRT
Sbjct: 1 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK+KLCKVR V G K +PY
Sbjct: 61 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRHVGTGPKNVPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+DGRTIRYPDPLIK ND+I+LD+ +KI DFIKF+ GN+ M+TGGRN GRVG I +R
Sbjct: 121 LVTHDGRTIRYPDPLIKVNDSIQLDIASSKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +HI+D++GH FATRL NVF IGKG+K ++SLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDIVHIKDSMGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAA 240
Query: 259 QAAA 262
+ AA
Sbjct: 241 KVAA 244
>gi|148695326|gb|EDL27273.1| mCG127176 [Mus musculus]
Length = 245
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 199/244 (81%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+GPHK REC PLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECPPLIIFLRNRLKYALTGDEVKKICMQRFIKIDVKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEA++KLCKVR + G KGIP+
Sbjct: 61 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAQYKLCKVRKIFVGTKGIPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 240
Query: 259 QAAA 262
+ ++
Sbjct: 241 KQSS 244
>gi|330789883|ref|XP_003283028.1| hypothetical protein DICPUDRAFT_73982 [Dictyostelium purpureum]
gi|325087100|gb|EGC40481.1| hypothetical protein DICPUDRAFT_73982 [Dictyostelium purpureum]
Length = 267
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 168/251 (66%), Positives = 198/251 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+P+SGPHK RE LPLIL LRNRLKYALT +E
Sbjct: 1 MARGPKKHLKRLAAPNHWMLDKLSGKWAPRPTSGPHKLRESLPLILCLRNRLKYALTKKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQR V VDGKVRTD YPAGFMDV++I KT ENFRLLYD KGRF L + EEAK
Sbjct: 61 VTLILMQRLVKVDGKVRTDPNYPAGFMDVITIDKTKENFRLLYDPKGRFTLQRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL +V V+ G +GIPY++T DGRTIRYPDP IK +DT+K+D+E KIT FI FD+ N+
Sbjct: 121 FKLARVVKVESGNQGIPYVHTDDGRTIRYPDPAIKIHDTVKIDIESGKITAFIPFDINNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+ GG N GRVG I NRE+H GSF+ +HI D+ G++FATRL NVF IGK S+ +VSLP
Sbjct: 181 CMIVGGHNLGRVGAINNRERHAGSFDIVHITDSAGNQFATRLSNVFVIGKSSQTFVSLPA 240
Query: 241 GKGIKLSIIEE 251
GKG++ S I+E
Sbjct: 241 GKGVRRSRIDE 251
>gi|398388631|ref|XP_003847777.1| 40S ribosomal protein S4 [Zymoseptoria tritici IPO323]
gi|339467650|gb|EGP82753.1| hypothetical protein MYCGRDRAFT_106489 [Zymoseptoria tritici
IPO323]
Length = 262
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 204/262 (77%), Gaps = 2/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++APK S GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNSRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AI+MQR + VDGKVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H + EEA+
Sbjct: 61 TKAIVMQRLIKVDGKVRTDPTYPAGFMDVIGIEKTGENFRLVYDTKGRFTVHRITGEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+++ KI DFI FD G I
Sbjct: 121 YKLGKVNRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKINIATGKIEDFIHFDTGVI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPK
Sbjct: 181 AMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPK 239
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKG+KL+I EE R R+ AQA A
Sbjct: 240 GKGVKLTIAEE-RDRRRAQALA 260
>gi|158286707|ref|XP_308886.4| AGAP006871-PA [Anopheles gambiae str. PEST]
gi|157020596|gb|EAA04244.5| AGAP006871-PA [Anopheles gambiae str. PEST]
Length = 262
Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 165/261 (63%), Positives = 203/261 (77%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQRHV +DGKVRTD YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRHVKIDGKVRTDPNYPAGFMDVINIHKTGEYFRLIYDVKGRFTVHRITSEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G K +P++ T+DGRTIRYPDP I +D+I+ D+ K+ D +KF+ GN+
Sbjct: 121 YKLLKVKRVQIGPKRVPFLLTHDGRTIRYPDPQIHQHDSIQYDIATGKVLDVLKFEPGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGGRN GR G + REKH GSFE +H++D GH FATRL NVF IGK +K ++SLPK
Sbjct: 181 CMITGGRNLGRCGTVILREKHPGSFEIVHVKDTTGHVFATRLSNVFIIGKSTKAYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKG+KL+I EE +R A +AA
Sbjct: 241 GKGVKLTIAEERDRRLANKAA 261
>gi|449301876|gb|EMC97885.1| hypothetical protein BAUCODRAFT_155152 [Baudoinia compniacensis
UAMH 10762]
Length = 263
Score = 349 bits (896), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 163/260 (62%), Positives = 202/260 (77%), Gaps = 1/260 (0%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG+ KH KRL+AP HW+LDKL G +APK S+GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 4 RGIIKHQKRLSAPSHWLLDKLSGTYAPKASAGPHKLRDCMPLIVFIRNRLKYALNTRETK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
AI+MQR + VDGKVRTD YPAG+MDV++I KT ENFRL+YDTKGRF +H + +EE +K
Sbjct: 64 AIVMQRLIQVDGKVRTDPNYPAGYMDVITIEKTGENFRLVYDTKGRFTVHRITEEEGGYK 123
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
L KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL KITDF+ FD G I M
Sbjct: 124 LGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFVHFDTGVIAM 183
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGK
Sbjct: 184 ATGGRNMGRVGVITHRERHDGGFNVVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGK 242
Query: 243 GIKLSIIEEARKRQAAQAAA 262
G+KLSI EE +R+A A
Sbjct: 243 GVKLSIAEERDRRRAYALAG 262
>gi|426257601|ref|XP_004022414.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
Length = 266
Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 166/265 (62%), Positives = 205/265 (77%), Gaps = 3/265 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G KKHLK + APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MAWGPKKHLKHVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR---LLYDTKGRFRLHSLRDE 117
V I MQR + +DGKV TD TYPAGFMDV+SI KT ENF+ L+YDTK F ++ + E
Sbjct: 61 VKKICMQRFIKIDGKVHTDITYPAGFMDVISIDKTGENFQNFCLIYDTKDHFAVYCITPE 120
Query: 118 EAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDV 177
EAK+KLCKVR + G KGIP++ T+D TI YPDPLIK NDTI++DLE KITDFIKF
Sbjct: 121 EAKYKLCKVRKIFVGTKGIPHLVTHDAHTIHYPDPLIKVNDTIQIDLETGKITDFIKFGT 180
Query: 178 GNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVS 237
GN+ +VTGG + GR+G+I N+E+H SF+ +H++D G+ FATRL ++F IGKG+KPW+S
Sbjct: 181 GNLCIVTGGAHLGRIGVITNQERHPDSFDLVHVKDVNGNSFATRLSSIFVIGKGNKPWIS 240
Query: 238 LPKGKGIKLSIIEEARKRQAAQAAA 262
LP GKGI L+I EE KR AA+ ++
Sbjct: 241 LPHGKGIHLTIAEERDKRLAAKQSS 265
>gi|324523515|gb|ADY48258.1| 40S ribosomal protein S4 [Ascaris suum]
Length = 263
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/263 (63%), Positives = 201/263 (76%), Gaps = 1/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG K+HLKRL AP HWMLDKLGG FAP+P+SGPHK RE LPLIL LRNRLKYAL+Y E
Sbjct: 1 MARGPKRHLKRLAAPHHWMLDKLGGVFAPRPTSGPHKLRESLPLILFLRNRLKYALSYNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I QR + +DGKVRT+ +PAGFMDV++I KTNE FRLLYD KGR+ +H + + E +
Sbjct: 61 ARMICKQRLIKIDGKVRTEMRFPAGFMDVITIEKTNETFRLLYDAKGRYTVHRITEAEGR 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV G KG+P+I T+D RTIRYPDP +K NDTI LD+ K D++KFD GN+
Sbjct: 121 FKLCKVVKKSVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVLDIASGKFNDYVKFDQGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG++ +REKH GSF+ +H++DA GH FATRL NVF IGKG+K VSLP
Sbjct: 181 CMVTGGRNMGRVGVVGHREKHPGSFDIVHVKDAAGHTFATRLNNVFIIGKGTKSLVSLPG 240
Query: 241 G-KGIKLSIIEEARKRQAAQAAA 262
KG++L+I EE KR A + AA
Sbjct: 241 ATKGVRLTIAEERDKRLAQKKAA 263
>gi|221482770|gb|EEE21101.1| 40S ribosomal protein S4, putative [Toxoplasma gondii GT1]
gi|221503435|gb|EEE29133.1| 40S ribosomal protein S4, putative [Toxoplasma gondii VEG]
Length = 312
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/250 (64%), Positives = 202/250 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG +KHLKR+ AP HWMLDKL G +AP+PS GPHK RE +PL+++LRNRL+YALTYRE
Sbjct: 50 MARGPRKHLKRIAAPHHWMLDKLTGHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYRE 109
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ I+MQR + VD KVRTD+ YPAGFMDV+SI KT ENFR+L+DTKGRF H +R+EEA
Sbjct: 110 VMMIVMQRLIKVDNKVRTDQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEAS 169
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ V G KG+P + T+DGRT+RYP P IKA+D I+LDL KI D +KF+ GN+
Sbjct: 170 YKLCRVKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNM 229
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GRVG+I +RE+H G F+ IH++DA +EFATR+ NVF IGKG K W+SLPK
Sbjct: 230 AMVTGGHNVGRVGVIVHRERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPK 289
Query: 241 GKGIKLSIIE 250
KGI+LSI+E
Sbjct: 290 EKGIRLSIME 299
>gi|119592222|gb|EAW71816.1| ribosomal protein S4, X-linked, isoform CRA_b [Homo sapiens]
Length = 231
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/230 (70%), Positives = 190/230 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 230
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGK
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>gi|358340045|dbj|GAA33707.2| small subunit ribosomal protein S4e [Clonorchis sinensis]
Length = 285
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/261 (63%), Positives = 198/261 (75%), Gaps = 12/261 (4%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG+KKHLKRLNAPKHWMLDKLGG FAPKPS+GPHK RECLPL + LRNRLK AL Y E
Sbjct: 12 VRGIKKHLKRLNAPKHWMLDKLGGNFAPKPSTGPHKLRECLPLSIFLRNRLKVALNYNEC 71
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL Q+ + VDGKVRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF +H + EEAK+
Sbjct: 72 TKILAQKLIKVDGKVRTDKKYPAGFMDVITIEKTNEHFRLVYDTKGRFAIHRIHPEEAKY 131
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF------ 175
KLCKVR V G+PY+ T+D RTIRYPDP IK NDTI++D+ K+ + IKF
Sbjct: 132 KLCKVRKVLTASGGVPYLVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFDPGLFL 191
Query: 176 ------DVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 229
D GNI M+TGGRN GRVG I E+H GS E +H++D+ GH+F TRL NVF IG
Sbjct: 192 FIIFYYDQGNICMITGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFLTRLNNVFIIG 251
Query: 230 KGSKPWVSLPKGKGIKLSIIE 250
K +K W+SLPKGKG++LSIIE
Sbjct: 252 KSNKAWISLPKGKGVRLSIIE 272
>gi|238505502|ref|XP_002383974.1| 40S ribosomal protein S4 [Aspergillus flavus NRRL3357]
gi|317151420|ref|XP_001824650.2| 40S ribosomal protein S4 [Aspergillus oryzae RIB40]
gi|220690088|gb|EED46438.1| 40S ribosomal protein S4, putative [Aspergillus flavus NRRL3357]
gi|391863079|gb|EIT72393.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
Length = 261
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 159/248 (64%), Positives = 199/248 (80%), Gaps = 1/248 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPTKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQR + VDGKVRTD T+PAGFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 VKAIMMQRLIQVDGKVRTDPTFPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ KITDF +FD G +
Sbjct: 121 YKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDVATGKITDFARFDTGVV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+MVTGGRN GRVG++ +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPK
Sbjct: 181 IMVTGGRNMGRVGVVTHRERHDGGFNIVHVKDAVDNTFATRESNVFVIGQ-DKPWISLPK 239
Query: 241 GKGIKLSI 248
GKG+KLSI
Sbjct: 240 GKGVKLSI 247
>gi|95007264|emb|CAJ20484.1| 40s ribosomal protein s4, putative [Toxoplasma gondii RH]
Length = 263
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 161/250 (64%), Positives = 201/250 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG +KHLKR+ AP HWMLDKL G +AP+PS GPHK RE PL+++LRNRL+YALTYRE
Sbjct: 1 MARGPRKHLKRIAAPHHWMLDKLTGHYAPRPSPGPHKLRESAPLVVLLRNRLRYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ I+MQR + VD KVRTD+ YPAGFMDV+SI KT ENFR+L+DTKGRF H +R+EEA
Sbjct: 61 VMMIVMQRLIKVDNKVRTDQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ V G KG+P + T+DGRT+RYP P IKA+D I+LDL KI D +KF+ GN+
Sbjct: 121 YKLCRVKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GRVG+I +RE+H G F+ IH++DA +EFATR+ NVF IGKG K W+SLPK
Sbjct: 181 AMVTGGHNVGRVGVIVHRERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPK 240
Query: 241 GKGIKLSIIE 250
KGI+LSI+E
Sbjct: 241 EKGIRLSIME 250
>gi|146418285|ref|XP_001485108.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
gi|146390581|gb|EDK38739.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
Length = 244
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 199/243 (81%), Gaps = 1/243 (0%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++GIPY
Sbjct: 61 DSTFPAGFMDVITLEATNEHFRLVYDVKGRFAVHRITAEEASYKLGKVKKVQLGKRGIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+DGRTIRYPDPLI+ANDT+K+DLE KI+DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 121 VVTHDGRTIRYPDPLIRANDTVKIDLESGKISDFIKFDTGALVMVTGGRNLGRVGVITHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 257
EKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 181 EKHEGGFDLVHIKDSLENTFVTRLTNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 240
Query: 258 AQA 260
Q
Sbjct: 241 QQG 243
>gi|226507767|ref|NP_001147360.1| 40S ribosomal protein S4 [Zea mays]
gi|195610502|gb|ACG27081.1| 40S ribosomal protein S4 [Zea mays]
Length = 261
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 164/260 (63%), Positives = 204/260 (78%), Gaps = 1/260 (0%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG KH KRL+AP HW+LDKL G++APK S GPHK R+C+PLI+ +RNRLKYAL RE+
Sbjct: 2 RGPGKHQKRLSAPSHWLLDKLSGSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGREMK 61
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
AI+MQR + VDGKVRTD TYPAGFMDV++I KT E+FRL+YDTKGRF +H + EEA++K
Sbjct: 62 AIVMQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEHFRLVYDTKGRFTVHRITGEEAEYK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
L KV+ VQ G+ GIP++ T+D RTIR+PDP IK NDT+K+DL KI DFI+FD G I M
Sbjct: 122 LGKVKRVQLGKGGIPFLVTHDARTIRFPDPAIKVNDTVKIDLTTGKIQDFIRFDTGVIAM 181
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGK
Sbjct: 182 ATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGQ-EKPWISLPKGK 240
Query: 243 GIKLSIIEEARKRQAAQAAA 262
G+KLSI EE +R+A A
Sbjct: 241 GVKLSIAEERDRRRAHALAG 260
>gi|312077176|ref|XP_003141188.1| 40S ribosomal protein S4 [Loa loa]
gi|307763646|gb|EFO22880.1| 40S ribosomal protein S4 [Loa loa]
Length = 263
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 167/263 (63%), Positives = 200/263 (76%), Gaps = 1/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG K+HLKRL APKHWMLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E
Sbjct: 1 MARGPKRHLKRLAAPKHWMLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I QR + VDGKVRTD +PAGFMDV+ I +TNE FRLLYD KGR+ H + ++E
Sbjct: 61 ARMICKQRLIKVDGKVRTDMRFPAGFMDVIRIDRTNETFRLLYDAKGRYATHRITEQEGN 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCK+ G KG+P+I T+D RTIRYPDP +K NDTI +D+ K++D++KFD GN+
Sbjct: 121 FKLCKIVKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIMVDIATGKMSDYVKFDQGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP- 239
MVTGGRN GRVGI+ +REKH GSF+ +HI+DA GH FATRL NVF IGKG+K VSLP
Sbjct: 181 CMVTGGRNMGRVGIVGHREKHPGSFDIVHIKDAAGHSFATRLNNVFIIGKGTKSMVSLPG 240
Query: 240 KGKGIKLSIIEEARKRQAAQAAA 262
KG++L+I EE +R A + AA
Sbjct: 241 PTKGVRLTIAEERDRRLAQKRAA 263
>gi|344257932|gb|EGW14036.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 335
Score = 346 bits (888), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 160/235 (68%), Positives = 194/235 (82%)
Query: 28 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 87
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 100 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 159
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 160 DVISIDKTGENFRLIYDTKGRFAVHRITSEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 219
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 220 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 279
Query: 208 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 280 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 334
>gi|58259587|ref|XP_567206.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107185|ref|XP_777723.1| 40S ribosomal protein S4 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|321249797|ref|XP_003191577.1| hypothetical protein CGB_A6670W [Cryptococcus gattii WM276]
gi|50260419|gb|EAL23076.1| hypothetical protein CNBA6010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223343|gb|AAW41387.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458044|gb|ADV19790.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
gi|405117993|gb|AFR92768.1| 40s ribosomal protein [Cryptococcus neoformans var. grubii H99]
Length = 263
Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 165/248 (66%), Positives = 196/248 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL AP WMLDKLGG +AP+PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MGRGPKKHLKRLAAPSSWMLDKLGGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+ QR + VDGKVRTD+T+PAGFMDV+SI ++ E+FRLLYD KGRF +H + EEA
Sbjct: 61 VTAIVKQRLIKVDGKVRTDETFPAGFMDVISIERSGEHFRLLYDVKGRFTIHRITPEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL KVR Q G KG+P+I T+DGRTIRYPDP IK NDT+K D +NKI D IKF+ GN+
Sbjct: 121 FKLLKVRKHQLGAKGVPHIVTHDGRTIRYPDPAIKVNDTVKFDFVQNKIVDHIKFEPGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GR G+I ++E+H G F+ +H++D L FATRL N+F IG+GSK VSLPK
Sbjct: 181 VMVTGGRNMGRSGVIVHKERHLGGFDIVHVKDVLDRTFATRLSNIFVIGEGSKAQVSLPK 240
Query: 241 GKGIKLSI 248
GKG+KLSI
Sbjct: 241 GKGVKLSI 248
>gi|343429529|emb|CBQ73102.1| probable ribosomal protein S4.e, cytosolic [Sporisorium reilianum
SRZ2]
Length = 264
Score = 345 bits (886), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 160/261 (61%), Positives = 199/261 (76%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG K HLKRLNAP WMLDKL G +AP+PS+GPHK RE LPL+++LRNRLKYALT RE
Sbjct: 1 MVRGPKHHLKRLNAPSSWMLDKLSGTYAPRPSNGPHKLREALPLVILLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI QR + +DGKVRTD TYP GF DVVSI K+ E+FR+LYD KGRF +H + EEA
Sbjct: 61 VNAITAQRLIKIDGKVRTDPTYPTGFQDVVSIDKSGEHFRILYDVKGRFIVHRITAEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G +G+P+I T+DGRTIRYPDP IK NDT++ D+E KI DF+ FD G
Sbjct: 121 YKLLKVKKVQLGARGVPHIVTHDGRTIRYPDPAIKVNDTVRFDIESQKILDFVAFDTGAT 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN+GR G+I RE+H G F+ +HI+D LG +F+TRL NVF IG KP +S+P+
Sbjct: 181 VMVTGGRNQGRAGVITGRERHLGGFDIVHIRDVLGRDFSTRLSNVFVIGADGKPMISMPR 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
G G+KL+I EE +R+ + A
Sbjct: 241 GGGVKLTITEERDQRRRQKEA 261
>gi|255730477|ref|XP_002550163.1| 40S ribosomal protein S4 [Candida tropicalis MYA-3404]
gi|240132120|gb|EER31678.1| 40S ribosomal protein S4 [Candida tropicalis MYA-3404]
Length = 244
Score = 345 bits (886), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H + EEA +KL KV+ VQ G+KG+PY
Sbjct: 61 DSTYPAGFMDVITLEATNEHFRLIYDVKGKFAVHRISAEEASYKLGKVKKVQLGKKGVPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+DGRT+RYPDPLIKANDT+K+DL KI DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 121 VVTHDGRTLRYPDPLIKANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 257
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 181 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 240
Query: 258 AQA 260
Q
Sbjct: 241 QQG 243
>gi|238879347|gb|EEQ42985.1| 40S ribosomal protein S4 [Candida albicans WO-1]
Length = 244
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H + EEA +KL KV+ VQ G+KG+PY
Sbjct: 61 DTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISGEEAAYKLGKVKKVQLGKKGVPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+DGRTIRYPDPLI+ANDT+K+DL KI DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 121 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 257
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 181 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 240
Query: 258 AQA 260
Q
Sbjct: 241 QQG 243
>gi|68475117|ref|XP_718444.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|68475658|ref|XP_718177.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46439933|gb|EAK99245.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46440209|gb|EAK99518.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
Length = 244
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H + EEA +KL KV+ VQ G+KG+PY
Sbjct: 61 DTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEAAYKLGKVKKVQLGKKGVPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+DGRTIRYPDPLI+ANDT+K+DL KI DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 121 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 257
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 181 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 240
Query: 258 AQA 260
Q
Sbjct: 241 QQG 243
>gi|237840521|ref|XP_002369558.1| hypothetical protein TGME49_007440 [Toxoplasma gondii ME49]
gi|211967222|gb|EEB02418.1| hypothetical protein TGME49_007440 [Toxoplasma gondii ME49]
Length = 301
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 160/249 (64%), Positives = 201/249 (80%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG +KHLKR+ AP HWMLDKL G +AP+PS GPHK RE +PL+++LRNRL+YALTYREV
Sbjct: 40 ARGPRKHLKRIAAPHHWMLDKLTGHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYREV 99
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
+ I+MQR + VD KVRTD+ YPAGFMDV+SI KT ENFR+L+DTKGRF H +R+EEA +
Sbjct: 100 MMIVMQRLIKVDNKVRTDQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEASY 159
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLC+V+ V G KG+P + T+DGRT+RYP P IKA+D I+LDL KI D +KF+ GN+
Sbjct: 160 KLCRVKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNMA 219
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGG N GRVG+I +RE+H G F+ IH++DA +EFATR+ NVF IGKG K W+SLPK
Sbjct: 220 MVTGGHNVGRVGVIVHRERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPKE 279
Query: 242 KGIKLSIIE 250
KGI+LSI+E
Sbjct: 280 KGIRLSIME 288
>gi|417408892|gb|JAA50980.1| Putative 40s ribosomal protein s4, partial [Desmodus rotundus]
Length = 236
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 160/235 (68%), Positives = 194/235 (82%)
Query: 28 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 87
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 1 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 60
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 61 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 120
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 121 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 180
Query: 208 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 181 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 235
>gi|242024748|ref|XP_002432788.1| 40S ribosomal protein S4, putative [Pediculus humanus corporis]
gi|212518297|gb|EEB20050.1| 40S ribosomal protein S4, putative [Pediculus humanus corporis]
Length = 245
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 198/244 (81%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RT
Sbjct: 1 MLDKLGGVYAPRPSAGPHKLRESLPLVIFLRNRLKYALTNCEVKKIVMQRLIKVDGKIRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D YPAGFMDV+SI K NE FRL+YD KGRF +H + +EA +KLCKV+ VQ G KG+P+
Sbjct: 61 DPNYPAGFMDVISIEKINELFRLIYDVKGRFTIHRITPDEATYKLCKVKKVQTGPKGVPF 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+DGRTIRYPDPLIK NDTI+L++ +KI DFIKF+ GN+ M+TGGRN GRVG + NR
Sbjct: 121 LVTHDGRTIRYPDPLIKVNDTIQLEIATSKILDFIKFESGNLCMITGGRNLGRVGTVVNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +HI+D GH FATRL NVF IGKGSK +VSLP+GKG+KLS+ EE KR AA
Sbjct: 181 ERHPGSFDIVHIKDTQGHTFATRLNNVFIIGKGSKAYVSLPRGKGVKLSVAEERDKRLAA 240
Query: 259 QAAA 262
+AA+
Sbjct: 241 KAAS 244
>gi|28630193|gb|AAN77885.1| ribosomal protein S4 [Branchiostoma lanceolatum]
Length = 238
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 188/238 (78%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHV 70
RL AP HWMLDKL G FAP+PS GPHK RECLPL L LRNRLKYALTY EV ILMQR +
Sbjct: 1 RLAAPNHWMLDKLSGKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDEVKRILMQRLI 60
Query: 71 LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQ 130
VDGKVRTD+ YP+GFMD ++I KT ENFRL+ D KGRF +H + EEAK+KLCKVR V
Sbjct: 61 KVDGKVRTDRCYPSGFMDAITIEKTAENFRLICDVKGRFTVHRITPEEAKYKLCKVRKVM 120
Query: 131 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 190
G KGIP + T+D RTIRYPDP I+ ND++++D+ KITD IKFD GN+ MVTGGRN G
Sbjct: 121 TGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTGGRNLG 180
Query: 191 RVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 248
RVG++ NRE+H GS + +H++D GH FATRL N+F IG+G+KPWVSL KGKGI L+I
Sbjct: 181 RVGLVTNRERHPGSLDIVHVKDTAGHTFATRLSNIFVIGRGNKPWVSLLKGKGIHLTI 238
>gi|406604840|emb|CCH43715.1| 40S ribosomal protein S4 [Wickerhamomyces ciferrii]
Length = 243
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 162/243 (66%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D T+P+GFMDV+S+ TNENFRL+YD KGRF +H + DEEA +KL KV+ V G++G+PY
Sbjct: 61 DATFPSGFMDVISLEATNENFRLVYDVKGRFAVHRISDEEASYKLGKVKQVALGKRGVPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+DGRTIRYPDP IK NDT+K+DLE KITDFIKFD G +V VTGGRN GRVG+I +R
Sbjct: 121 VVTHDGRTIRYPDPAIKINDTVKIDLESGKITDFIKFDTGKLVYVTGGRNLGRVGVITHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H+G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE R R+ A
Sbjct: 181 ERHEGGFDLVHIKDSLENTFVTRLQNVFVIGEPGKPYISLPKGKGIKLSISEE-RDRRRA 239
Query: 259 QAA 261
Q+
Sbjct: 240 QSG 242
>gi|351700252|gb|EHB03171.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 258
Score = 343 bits (879), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 164/262 (62%), Positives = 203/262 (77%), Gaps = 5/262 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDK G FAP+PS+GPHK RECLPLI+ LRNRLK ALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKSTGVFAPRPSTGPHKLRECLPLIIFLRNRLKSALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I M R + +DGKVRT+ TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEA+
Sbjct: 61 VKKICMHRFIKIDGKVRTEITYPAGFMDVISIDKTGENFRLIYDTKGRFAIHRITPEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++ L+ KIT + N+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIHLDTGKIT-----NTSNL 175
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N G +G+I N E+H GSF+ +H++D G+ FAT L N+F IGKG+KPW+SLP+
Sbjct: 176 CMVTGGANLGGIGVITNGERHPGSFDVVHVKDTNGNSFATWLSNIFLIGKGNKPWISLPR 235
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 236 GKGIRLTIAEERDKRLAAKQSS 257
>gi|46128673|ref|XP_388890.1| hypothetical protein FG08714.1 [Gibberella zeae PH-1]
Length = 243
Score = 342 bits (877), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 159/239 (66%), Positives = 198/239 (82%), Gaps = 1/239 (0%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YREV AILMQR V VDGKVRT
Sbjct: 1 MLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYREVKAILMQRLVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D T+P+GFMDV++I KT ENFRL+YDTKGRF +H +++EEA++KL KV+ VQ G+ GIP+
Sbjct: 61 DSTFPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQNEEAEYKLGKVKRVQLGRGGIPF 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTGGRNMGRVGVITHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 257
E+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 181 ERHDGGFNIVHVKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 238
>gi|345324726|ref|XP_001510806.2| PREDICTED: 40S ribosomal protein S4-like, partial [Ornithorhynchus
anatinus]
Length = 279
Score = 342 bits (877), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 159/229 (69%), Positives = 189/229 (82%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 51 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 110
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+
Sbjct: 111 KKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKY 170
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKVR + G KGIP++ T++ RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+
Sbjct: 171 KLCKVRKIFVGTKGIPHLVTHEARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLC 230
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 230
MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGK
Sbjct: 231 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 279
>gi|71015994|ref|XP_758861.1| hypothetical protein UM02714.1 [Ustilago maydis 521]
gi|46098379|gb|EAK83612.1| hypothetical protein UM02714.1 [Ustilago maydis 521]
Length = 386
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 157/261 (60%), Positives = 199/261 (76%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
+ RG K HLKRLNAP WMLDKL G +AP+PS+GPHK RE LPL+++LRNRLKYALT RE
Sbjct: 123 LVRGPKHHLKRLNAPSSWMLDKLSGTYAPRPSNGPHKLREALPLVILLRNRLKYALTGRE 182
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI QR + +DGKVRTD TYP GF DVVSI K+ E+FR+LYD KGRF +H + EEA
Sbjct: 183 VNAITAQRLIKIDGKVRTDPTYPTGFQDVVSIEKSGEHFRILYDVKGRFIVHRITAEEAT 242
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G +G+P+I T+DGRTIRYPDP IK NDT++ D++ KI DF+ FD G
Sbjct: 243 YKLLKVKKVQLGARGVPHIVTHDGRTIRYPDPAIKVNDTVRFDIDSQKILDFVAFDTGAT 302
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN+GR G+I +E+H G F+ +HI+D LG +F+TRL NVF IG KP +S+P+
Sbjct: 303 VMVTGGRNQGRAGVITGKERHLGGFDIVHIRDVLGRDFSTRLSNVFVIGTDGKPMISMPR 362
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
G G+KL+I EE +R+ + A
Sbjct: 363 GGGVKLTITEERDQRRRQKEA 383
>gi|289741733|gb|ADD19614.1| ribosomal protein S4 [Glossina morsitans morsitans]
Length = 243
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 194/242 (80%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR + VDGKVRT
Sbjct: 1 MLDKLGGVFAPRPSTGPHKLRESLPLMIFLRNRLKYALNGAEVTKIVMQRLIKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKVR Q G KG+P+
Sbjct: 61 DPTYPAGFMDVITIEKTGEYFRLIYDVKGRFTIHRISPEEAKYKLCKVRKTQLGAKGVPF 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
I T+DGRTIRYPDPLIKANDT+++D+ KI DFIKFD GN+ M+TGGRN GRVG + NR
Sbjct: 121 IVTHDGRTIRYPDPLIKANDTVQVDIATGKIIDFIKFDSGNLCMITGGRNLGRVGTVVNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +HI+D+ GH FATRL NVF IGK ++ ++SLPK G+KLSI EE KR AA
Sbjct: 181 ERHPGSFDIVHIKDSQGHIFATRLSNVFIIGKSTRSYISLPKDLGVKLSIAEERDKRLAA 240
Query: 259 QA 260
+A
Sbjct: 241 KA 242
>gi|449460918|ref|XP_004148191.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 216
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/176 (91%), Positives = 171/176 (97%)
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 146
+DVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY+NTYDGRT
Sbjct: 39 LDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRT 98
Query: 147 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 206
IRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGSFE
Sbjct: 99 IRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFE 158
Query: 207 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
TIHIQDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR A+Q+A
Sbjct: 159 TIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQSAV 214
>gi|170574388|ref|XP_001892792.1| 40S ribosomal protein S4 [Brugia malayi]
gi|158601466|gb|EDP38372.1| 40S ribosomal protein S4, putative [Brugia malayi]
Length = 263
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/263 (63%), Positives = 198/263 (75%), Gaps = 1/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG K+HLKRL APKHWMLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E
Sbjct: 1 MARGPKRHLKRLAAPKHWMLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I QR + VDGKVRTD +PAGFMDV+ I KTNE FRLLYD KGR+ H + ++E
Sbjct: 61 ARMICKQRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGN 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
KLCK+ G KG+P+I T+D RTIRYPDP +K NDTI +D+ K++D++KFD GN+
Sbjct: 121 IKLCKIVKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP- 239
MVTGGRN GRVGI+ +REKH GSF+ +HI+DA H FATRL NVF IGKG+K VSLP
Sbjct: 181 CMVTGGRNMGRVGIVGHREKHPGSFDIVHIKDAADHSFATRLNNVFIIGKGTKSIVSLPG 240
Query: 240 KGKGIKLSIIEEARKRQAAQAAA 262
KG++L+I EE +R A + AA
Sbjct: 241 PTKGVRLTIAEERDRRLAQKRAA 263
>gi|402223625|gb|EJU03689.1| 40S ribosomal protein S4 [Dacryopinax sp. DJM-731 SS1]
Length = 244
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 194/244 (79%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +AP+PS GPHK RECLPL++ LRNRLKYALT REV +I+MQR + VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSPGPHKLRECLPLVIFLRNRLKYALTGREVNSIVMQRLIKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+++ K+ E+FRLLYD KGRF +H + EEA +KL KV+ + G KG+PY
Sbjct: 61 DTTYPAGFMDVITLEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVKKLAIGAKGVPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
I T+DGRTIRYPDPLIK NDT+K DLE KI DF+KFD GN+ ++TGGRN GRVG I +R
Sbjct: 121 IVTHDGRTIRYPDPLIKVNDTVKFDLETGKIVDFVKFDTGNVAVITGGRNMGRVGTIVHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
EKH G F+ +H++D L +FATR+GN+F +G+G KPWVSLPKGKG+KLSI EE R+
Sbjct: 181 EKHIGGFDIVHVKDVLDRDFATRIGNIFVVGEGVKPWVSLPKGKGVKLSIAEERDVRRKQ 240
Query: 259 QAAA 262
+ A
Sbjct: 241 REAV 244
>gi|449269808|gb|EMC80554.1| 40S ribosomal protein S4, partial [Columba livia]
Length = 236
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 158/235 (67%), Positives = 194/235 (82%)
Query: 28 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 87
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 1 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 60
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
DV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 61 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 120
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
RYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 121 RYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 180
Query: 208 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 181 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 235
>gi|349802859|gb|AEQ16902.1| putative 40s ribosomal protein s4 [Pipa carvalhoi]
Length = 235
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/236 (67%), Positives = 193/236 (81%), Gaps = 1/236 (0%)
Query: 26 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 85
FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAG
Sbjct: 1 VFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV-KICMQRFIKIDGKVRTDITYPAG 59
Query: 86 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 145
FMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR G KGIP++ T+D R
Sbjct: 60 FMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPHLVTHDAR 119
Query: 146 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 205
TIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF
Sbjct: 120 TIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 179
Query: 206 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 261
+ +H++DA G+ FATRL N+F IGKGSKPW+SLP+GKGI+L+I EE KR AA+ +
Sbjct: 180 DVVHVKDANGNSFATRLSNIFVIGKGSKPWISLPRGKGIRLTIAEERDKRLAAKQS 235
>gi|225713724|gb|ACO12708.1| 40S ribosomal protein S4 [Lepeophtheirus salmonis]
Length = 260
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/260 (61%), Positives = 200/260 (76%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRL APK WMLDKLGG F +PSSGPHK RE +PL L LRNRL+YALT +E
Sbjct: 1 MPRGPKKHLKRLVAPKTWMLDKLGGVFTTRPSSGPHKLRESVPLTLFLRNRLRYALTAKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I QR V VDG+VR D +PAGFMDV+ I +TNENFRL+YD KGRF +H + +EAK
Sbjct: 61 VGTITKQRLVKVDGRVRMDPRFPAGFMDVIQIERTNENFRLIYDVKGRFTVHRITAQEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V++V+ G K +PY+ T DGRTIRYPDP+I+ ND+I+LD+ K D +KFD GN+
Sbjct: 121 YKLCRVKAVKTGPKNVPYLYTSDGRTIRYPDPVIRVNDSIRLDINTGKTMDSVKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL F IGK +KP++SLPK
Sbjct: 181 CMVTGGRNTGRVGAIMHRERHPGSFDIVHVKDSNGHTFATRLDYTFVIGKDNKPYISLPK 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
G GIKL+I EE KR + +A
Sbjct: 241 GGGIKLTIAEERDKRLSQKA 260
>gi|432097049|gb|ELK27547.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 287
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/259 (63%), Positives = 196/259 (75%), Gaps = 22/259 (8%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 47 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 106
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR F+D KT ENFRL+YDTKGRF +H +R EEAK
Sbjct: 107 VKKICMQR-----------------FID-----KTGENFRLVYDTKGRFAVHRIRPEEAK 144
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTI YPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 145 YKLCKVRKIFVGTKGIPHLVTHDARTICYPDPLIKVNDTIQIDLESGKITDFIKFDTGNL 204
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGG N GR+G+I NREKH GSF+ +H++D G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 205 CMITGGANLGRIGVITNREKHPGSFDVVHVKDTTGNSFATRLSNIFVIGKGNKPWISLPR 264
Query: 241 GKGIKLSIIEEARKRQAAQ 259
GKGI+L+I EE KR AA+
Sbjct: 265 GKGIRLTIAEERDKRLAAK 283
>gi|298707012|emb|CBJ29820.1| 40S ribosomal protein S4 [Ectocarpus siliculosus]
Length = 262
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/260 (61%), Positives = 204/260 (78%), Gaps = 1/260 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH+KRLNAPKHW+L K+ G +APKPS GPH +RECLPL++++RNRLKYALT E
Sbjct: 1 MGRGPKKHMKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I MQ+ + VDGKVRTD +PAGFMDVV I K+ + FRLLY+TKGRF LH + +EE+K
Sbjct: 61 ANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLC+V V+ + IPY+ T+DGRTIRYPDPLIK NDTIK+DLE K D IKF++GN+
Sbjct: 121 FKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+ GRN GRVGI+++ E+H GSF+ + ++D GH FATRL N+FT+G G++ VSLPK
Sbjct: 181 CMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRAMVSLPK 240
Query: 241 GKGIKLSIIEE-ARKRQAAQ 259
GKG+KL+I+EE A K + AQ
Sbjct: 241 GKGVKLTILEEKAAKIKKAQ 260
>gi|358056143|dbj|GAA97883.1| hypothetical protein E5Q_04563 [Mixia osmundae IAM 14324]
Length = 283
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 164/272 (60%), Positives = 203/272 (74%), Gaps = 18/272 (6%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G +KHLKRLNAP MLDKLGG +AP+ S GPHK RE +P+ + LRNRLKYALT REV
Sbjct: 4 KGARKHLKRLNAPSALMLDKLGGTYAPRASPGPHKLREAMPMSVFLRNRLKYALTGREVT 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ QR + VDGKVRTD TYP GFMDVVSI K+ E+FR+LYD KGRF +H + EEA++K
Sbjct: 64 LIVAQRLIKVDGKVRTDPTYPTGFMDVVSIEKSGEHFRILYDVKGRFAIHRITAEEAQYK 123
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEE---------------- 166
LCKV+ VQ G KG+PY+ T+DGRTIRYPDP IK ND+IKL L +
Sbjct: 124 LCKVKKVQLGAKGVPYLVTHDGRTIRYPDPAIKVNDSIKLVLPDTINPAATHSGAASAVA 183
Query: 167 --NKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGN 224
+KI IKF+VGN+VM TGGRN GR G+I +RE+H G F+ +H++D++ H F+TRLGN
Sbjct: 184 TVHKIDGHIKFEVGNLVMCTGGRNMGRAGVIVHRERHMGGFDIVHVRDSMDHTFSTRLGN 243
Query: 225 VFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 256
VF +G+GSK WVSLPKGKGIKLSI EE +R+
Sbjct: 244 VFLVGEGSKAWVSLPKGKGIKLSIAEERDQRR 275
>gi|351705604|gb|EHB08523.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 237
Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 157/236 (66%), Positives = 193/236 (81%)
Query: 27 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 86
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGK+RTD TYPAGF
Sbjct: 1 MAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKIRTDITYPAGF 60
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 146
MDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RT
Sbjct: 61 MDVISIDKTGENFRLIYDTKGRFAIHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDART 120
Query: 147 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 206
IRYPDPLIK NDTI++DL+ KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 121 IRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFD 180
Query: 207 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
+H++D G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 181 VVHVKDTNGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKHSS 236
>gi|388583766|gb|EIM24067.1| 40S ribosomal protein S4, partial [Wallemia sebi CBS 633.66]
Length = 260
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/260 (61%), Positives = 200/260 (76%), Gaps = 2/260 (0%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL ++LRNRLKYAL+ EV
Sbjct: 1 RGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTILLRNRLKYALSSEEVT 60
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
+IL QR V +DGK RTD+TYP GF DV+SI + E+FR+LYD KGRF +H + DEEA+FK
Sbjct: 61 SILQQRLVKIDGKARTDRTYPTGFQDVISIEASGEHFRILYDVKGRFTIHRITDEEAQFK 120
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
L KV+ G +G+P+I T+DGRTIRYPDPLIK NDT+K DL NKI DF+KF+ GN+VM
Sbjct: 121 LLKVKKQAIGARGVPFIVTHDGRTIRYPDPLIKVNDTVKFDLINNKIVDFVKFETGNVVM 180
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
TGGRN+GR+G I RE+H G ++ ++I+D L +FATRL NVF +G+ K WVSLPKG
Sbjct: 181 ATGGRNQGRIGTIIGRERHLGGYDIVNIKDPLDRQFATRLTNVFVVGQ-QKSWVSLPKGG 239
Query: 243 GIKLSIIEE-ARKRQAAQAA 261
G+KL+I EE +R+ AQA+
Sbjct: 240 GVKLTITEERDMRRRRAQAS 259
>gi|126697462|gb|ABO26688.1| ribosomal protein S4 [Haliotis discus discus]
Length = 242
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 152/239 (63%), Positives = 194/239 (81%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG +K LKR+ APK WMLDKLGG FAP+PS+GPHK RE LP+ +++RNRLKYALTY EV
Sbjct: 4 RGRRKVLKRVTAPKSWMLDKLGGVFAPRPSTGPHKLREALPMSVLMRNRLKYALTYNEVK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ QR + VDG+VRTDK +P GFMDVV+I KT+ENFR+LYD KGRF +H ++ EEAK+K
Sbjct: 64 KIVNQRLIKVDGRVRTDKNFPTGFMDVVTIEKTSENFRVLYDVKGRFIVHRIKPEEAKYK 123
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
LC+VR V G KG+PY+ T DGRTIRYPDP++K NDTI +D+ K+ D++KF+ GN+
Sbjct: 124 LCRVRGVATGPKGVPYLTTNDGRTIRYPDPVVKVNDTIMVDIATGKMKDYVKFESGNLCT 183
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
+TGG N GRVG+I NREKH GSF+ +H++D+LGH FATR+ VF IGKG+KPW+SLP+G
Sbjct: 184 ITGGHNLGRVGVIINREKHPGSFDIVHVKDSLGHTFATRMSYVFVIGKGNKPWISLPRG 242
>gi|313236165|emb|CBY11489.1| unnamed protein product [Oikopleura dioica]
gi|313240142|emb|CBY32493.1| unnamed protein product [Oikopleura dioica]
Length = 258
Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 198/257 (77%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAP HWMLDKL G +APKPS GPHK RECLPLIL LRNRL YALT E
Sbjct: 1 MTRGQKKHLKRLNAPNHWMLDKLTGVYAPKPSQGPHKQRECLPLILFLRNRLHYALTGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQR V VDGKVRTD +PAGFMDV+S+ +TNE+FRL+YD KGRF +H + EE K
Sbjct: 61 VKKILMQRLVKVDGKVRTDVNFPAGFMDVISMERTNEHFRLIYDVKGRFAVHRITPEEGK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC++ + KG+P++ T+D RTIRYP+P IK ND++ +D+E +T+ ++FD G++
Sbjct: 121 YKLCRITKIGVAAKGVPFVVTHDARTIRYPNPDIKVNDSVIVDIESGAVTEHVRFDTGSL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+TGG N GRVG+I +R++H GSF+ ++I+DA G FATRL NVF IG+G + VSLP+
Sbjct: 181 CMITGGHNLGRVGVIASRDRHPGSFDIVNIKDATGAVFATRLDNVFIIGRGKQALVSLPR 240
Query: 241 GKGIKLSIIEEARKRQA 257
KGI++SI EE KR A
Sbjct: 241 QKGIRISIAEEREKRLA 257
>gi|149244128|ref|XP_001526607.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449001|gb|EDK43257.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 246
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/240 (67%), Positives = 194/240 (80%), Gaps = 2/240 (0%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL GA+AP+ S+GPHK RE LPL++ LRNRLKYAL REV AILMQ+HV VDGKVRT
Sbjct: 1 MLDKLSGAYAPRSSAGPHKLRESLPLVIFLRNRLKYALNGREVKAILMQQHVQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++GIPY
Sbjct: 61 DATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRISAEEASYKLGKVKKVQLGKRGIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+DGRTIRYPDPLIK ND++K+DL KITDF+KFD G +VMVTGGRN GR+G I +R
Sbjct: 121 VVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGRLVMVTGGRNMGRIGTIVHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEE-ARKRQ 256
EKH+G F+ +HI+DAL F TRL NVF IG + KPWVSLPKGKGIKLSI EE R RQ
Sbjct: 181 EKHEGGFDLVHIKDALERTFVTRLNNVFVIGEEAGKPWVSLPKGKGIKLSITEERDRARQ 240
>gi|357017173|gb|AET50615.1| hypothetical protein [Eimeria tenella]
Length = 262
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/251 (63%), Positives = 197/251 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWML+K+ G +AP+PS GPHK RECLPL ++LRNRLKYALTY+E
Sbjct: 1 MARGPKKHLKRLAAPSHWMLNKITGHYAPRPSPGPHKLRECLPLAILLRNRLKYALTYQE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I+MQR V VDGKVRTD+ YPAGFMDVVS+ KT ++FRLL DTKGRF + EEA
Sbjct: 61 TKLIVMQRLVKVDGKVRTDQCYPAGFMDVVSLEKTQQHFRLLLDTKGRFVPRPISAEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ V G K IP + T+D RTIR+P P IK +DTI+L + ++KI D KF+VGN+
Sbjct: 121 YKLCRVKKVLIGPKAIPMLVTHDARTIRFPHPNIKVHDTIRLSIADSKIVDTYKFEVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GRVG I NRE+H GSF+ +H++D+ G+EFATR+ NVF IGKG KP VSLPK
Sbjct: 181 AMVTGGHNVGRVGTIVNRERHLGSFDIVHLRDSRGNEFATRISNVFVIGKGEKPMVSLPK 240
Query: 241 GKGIKLSIIEE 251
KGI+L+I E+
Sbjct: 241 DKGIRLTIFED 251
>gi|323457181|gb|EGB13047.1| hypothetical protein AURANDRAFT_69604 [Aureococcus anophagefferens]
Length = 260
Score = 335 bits (860), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 157/255 (61%), Positives = 193/255 (75%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+NAP+HWML K+ GAFAP+PS+GPHK RECLPL+L+LRNRLKYA++ +E
Sbjct: 1 MARGPKKHLKRINAPRHWMLGKMDGAFAPRPSTGPHKLRECLPLVLILRNRLKYAISGQE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I M +HV VDGKVRTD TYPAGFMDV+S+ + + FRL+YDTKGRF LH + DEE
Sbjct: 61 AKQICMSKHVKVDGKVRTDPTYPAGFMDVISMDASGDQFRLMYDTKGRFTLHRISDEEKG 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V +V K IP + T+DGRT+RYPDP + +DT+KLD+ KI F KF+VG
Sbjct: 121 YKLCRVNAVYVTAKKIPVLTTHDGRTVRYPDPSVAVHDTVKLDIATGKIVSFQKFEVGKT 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+T GRN GRVG I EKH GSF+ + ++DA H FATRLGNVF IGK V+LPK
Sbjct: 181 CTITKGRNTGRVGTIMTVEKHPGSFDIVTVKDASNHTFATRLGNVFVIGKDDDLDVTLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKGIKL+IIEE K+
Sbjct: 241 GKGIKLTIIEERTKK 255
>gi|355336756|gb|AER57863.1| 40S ribosomal protein S4 [Acytostelium subglobosum]
Length = 267
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/251 (62%), Positives = 198/251 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GP K RECLPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGKWAPRPSAGPRKLRECLPLIIILRNRLKYALTGTE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V ILMQRH+ V+G VRTD +P GFMDV++I KT E+FRLL+DTKGRF+L ++ EAK
Sbjct: 61 VTKILMQRHIQVNGVVRTDPRFPVGFMDVITIEKTKEHFRLLFDTKGRFQLQRIQPNEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
F L +V V+ G +GIPY++T +G+T RYPDP IK +DT+K+DL+ KIT FI F++ N+
Sbjct: 121 FILTRVTKVETGLQGIPYVHTDNGQTFRYPDPAIKIHDTVKIDLDTQKITAFIPFELNNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GRVG+I NRE+H GSF+ +H+ D++GH FATRLGNVF IGKGS +VSL
Sbjct: 181 CMVTGGHNLGRVGVITNRERHPGSFDIVHVTDSVGHSFATRLGNVFVIGKGSTTFVSLLS 240
Query: 241 GKGIKLSIIEE 251
KG++ S +++
Sbjct: 241 SKGVRKSRMDD 251
>gi|341888765|gb|EGT44700.1| CBN-RPS-4 protein [Caenorhabditis brenneri]
gi|341900288|gb|EGT56223.1| hypothetical protein CAEBREN_12475 [Caenorhabditis brenneri]
Length = 259
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/257 (63%), Positives = 195/257 (75%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG KKHLKRL APKHWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E
Sbjct: 2 RGPKKHLKRLAAPKHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
IL QR V VDGKVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H ++ EA FK
Sbjct: 62 KILTQRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEADFK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
LCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ KITDF+KF+ GN+
Sbjct: 122 LCKVKSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPGNLAY 181
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
VTGGRN GRVGII +RE+ G+F+ IHI+DA GH FATR+ NVF IGKG+K VSLP G
Sbjct: 182 VTGGRNVGRVGIIGHRERLPGAFDIIHIKDAAGHSFATRISNVFVIGKGNKALVSLPSGG 241
Query: 243 GIKLSIIEEARKRQAAQ 259
G++L+I EE KR A +
Sbjct: 242 GVRLTIAEERDKRMAQK 258
>gi|58257447|gb|AAW69345.1| 40S ribosomal protein S4-A-like protein [Magnaporthe grisea]
Length = 244
Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 191/244 (78%), Gaps = 1/244 (0%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +APKPS GPHK RECLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 1 MLDKLSGTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRETKAILMQRLVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDVVSI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 61 DSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDPLIK NDT+K++L+ KITDFIKFD G + MVT G N GRVG+I +R
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGALAMVTAGNNMGRVGVITHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H G F +H++DA+ + F TR NVF IG KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 181 ERHDGGFNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPKGKGVKLTIAEERDRRRAQ 239
Query: 259 QAAA 262
A
Sbjct: 240 TIAG 243
>gi|47208976|emb|CAF90008.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 191/244 (78%), Gaps = 8/244 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYP GFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP+
Sbjct: 61 DITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD G N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVRIDLESGKITDFIKFDTGA--------NLGRIGVITNR 172
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +H++D G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 173 ERHPGSFDVVHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 232
Query: 259 QAAA 262
+ A+
Sbjct: 233 KQAS 236
>gi|409041189|gb|EKM50675.1| hypothetical protein PHACADRAFT_264068 [Phanerochaete carnosa
HHB-10118-sp]
Length = 245
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 191/243 (78%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT +EV++I+MQR V VD KVRT
Sbjct: 1 MLDKLDGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTAKEVLSIVMQRLVKVDNKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGF DV+S+ K+ E+FRLLYD KGRF +H + EEA +KL KV+ + G KG+PY
Sbjct: 61 DPTYPAGFQDVISLEKSGEHFRLLYDVKGRFTVHRITPEEATYKLLKVKKIGIGAKGVPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
I T+DGRTIRYPDPLIK NDT+K + E KITDF+KFD GNIVMVTGGRN GR G+I +R
Sbjct: 121 IITHDGRTIRYPDPLIKVNDTVKFEFETGKITDFVKFDTGNIVMVTGGRNMGRAGVIVHR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
EKH G ++ +HI+D+L FATR+ NVF IG+G KPW+SLP+GKG KL+I EE R+
Sbjct: 181 EKHIGGYDIVHIKDSLDRTFATRISNVFVIGEGIKPWISLPRGKGTKLTITEERDVRRRQ 240
Query: 259 QAA 261
+AA
Sbjct: 241 RAA 243
>gi|403308090|ref|XP_003944510.1| PREDICTED: 40S ribosomal protein S4, X isoform [Saimiri boliviensis
boliviensis]
Length = 360
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/261 (61%), Positives = 193/261 (73%), Gaps = 20/261 (7%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT--- 57
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
D+ +SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 58 -----------------GDEXXXXXXXXXISIDKTGENFRLIYDTKGRFAVHRITPEEAK 100
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 101 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 160
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GSF +H++DA G+ FATRL N+F IGKG+KPW+SLP+
Sbjct: 161 CMVTGGANLGRIGVITNRERHPGSFNVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 220
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
GKGI+L+I EE KR AA+ +
Sbjct: 221 GKGIRLTIAEERDKRLAAKQS 241
>gi|226469682|emb|CAX76671.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 245
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/241 (64%), Positives = 190/241 (78%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 1 MLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+KLCKVR V G G+P+
Sbjct: 61 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPF 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+ MVTGGRN GRVG I
Sbjct: 121 IVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQW 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE KR A
Sbjct: 181 ERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRA 240
Query: 259 Q 259
+
Sbjct: 241 R 241
>gi|67465453|ref|XP_648911.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|67466127|ref|XP_649211.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|67481379|ref|XP_656039.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|167381290|ref|XP_001735654.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|56465221|gb|EAL43529.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56465596|gb|EAL43825.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56473205|gb|EAL50644.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165902270|gb|EDR28139.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 326
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/265 (61%), Positives = 191/265 (72%), Gaps = 3/265 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG + HLKRLNAP HWML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL RE
Sbjct: 1 MARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ R + +DGK+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AK
Sbjct: 61 VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCK+ G IPYI T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN
Sbjct: 121 FKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNT 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+ GG GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP
Sbjct: 181 AMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPL 240
Query: 241 GKGIK---LSIIEEARKRQAAQAAA 262
KGIK L + E K+ Q A
Sbjct: 241 DKGIKKPLLQQVNETIKKNKMQKAG 265
>gi|167391306|ref|XP_001739715.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165896474|gb|EDR23879.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 326
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/265 (61%), Positives = 191/265 (72%), Gaps = 3/265 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG + HLKRLNAP HWML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL RE
Sbjct: 1 MARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ R + +DGK+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AK
Sbjct: 61 VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCK+ G IPYI T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN
Sbjct: 121 FKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNT 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+ GG GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP
Sbjct: 181 AMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPL 240
Query: 241 GKGIK---LSIIEEARKRQAAQAAA 262
KGIK L + E K+ Q A
Sbjct: 241 DKGIKKPLLQQVNETIKKNKMQKAG 265
>gi|119632119|gb|EAX11714.1| hCG38986, isoform CRA_b [Homo sapiens]
Length = 245
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/244 (63%), Positives = 192/244 (78%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +DGKVR
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRV 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+ MV G N GRVG+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAA 240
Query: 259 QAAA 262
+ ++
Sbjct: 241 KQSS 244
>gi|256072591|ref|XP_002572618.1| 40S ribosomal protein S4 [Schistosoma mansoni]
gi|360044251|emb|CCD81798.1| putative 40s ribosomal protein S4 [Schistosoma mansoni]
Length = 245
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 190/244 (77%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 1 MLDKLGGNFAPRPSTGPHKLRECLPLCIFLRNRLKYALTYTECTKILAQRLVKVDGRVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+KLCKV+ V G G+PY
Sbjct: 61 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKYKLCKVKKVLVGHGGVPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+ MVTGGRN GRVG I
Sbjct: 121 IVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQW 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE KR A
Sbjct: 181 ERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKNRGIRLSIIEERDKRIRA 240
Query: 259 QAAA 262
+ A
Sbjct: 241 RRLA 244
>gi|429329492|gb|AFZ81251.1| 40S ribosomal protein S4, putative [Babesia equi]
Length = 263
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/262 (61%), Positives = 196/262 (74%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH+KR+NAP HWMLDKL G +APK S GPHK RECLPL+++LRNRLKYALTY E
Sbjct: 1 MGRGPKKHMKRINAPSHWMLDKLTGKYAPKASPGPHKLRECLPLLVLLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V VDGKVRTD TYP GFMD+VS+ +TNE FR+LYDTKGRF H + EEA
Sbjct: 61 VKLIVMQRLVKVDGKVRTDITYPTGFMDIVSLDRTNEFFRMLYDTKGRFCPHKITPEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ G K + T+DGRTIRY P IKA D++++DL KI DF+KF++GN+
Sbjct: 121 YKLCRVKKTFLGPKEVNIAITHDGRTIRYVHPEIKAGDSVRVDLATGKILDFLKFEIGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGG N GRVG I N+EKH GSF+ IHI+D+ F+TR NVF IG GS+P+VSLP
Sbjct: 181 VMVTGGHNVGRVGTIVNKEKHPGSFDLIHIKDSQDSTFSTRSSNVFVIGLGSQPYVSLPS 240
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GI+ SIIE+ R A A A
Sbjct: 241 DNGIRKSIIEQRAIRLAKAARA 262
>gi|328859105|gb|EGG08215.1| hypothetical protein MELLADRAFT_42942 [Melampsora larici-populina
98AG31]
Length = 265
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/250 (61%), Positives = 192/250 (76%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG KKH+KRL AP WMLDKLGG +AP+ + GPHK RE LPL ++LRNRLKYALT REV
Sbjct: 3 VRGQKKHMKRLAAPSSWMLDKLGGTYAPRSNPGPHKLRESLPLSILLRNRLKYALTGREV 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ QR + VD KVRTD +P GFMDVVSI K+ ENFR+LYD KGRF +H + EEA +
Sbjct: 63 TLIVAQRLIKVDNKVRTDPKFPTGFMDVVSIEKSGENFRVLYDVKGRFTIHRISAEEAAY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ VQ G KG+P++ T+DGRTIRYPDP+IK NDTI+ DLE NKI D+I F+ G++V
Sbjct: 123 KLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPIIKVNDTIRFDLENNKIVDYIPFEAGSLV 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M TGGRN+GRVG I +REKH G ++ +H++D L F+TR+GN+ IG K +SLP+G
Sbjct: 183 MCTGGRNQGRVGTIVHREKHIGGYDIVHVRDVLDRAFSTRIGNIQVIGTHGKAGISLPRG 242
Query: 242 KGIKLSIIEE 251
G+KLSI EE
Sbjct: 243 GGVKLSIAEE 252
>gi|268535888|ref|XP_002633079.1| C. briggsae CBR-RPS-4 protein [Caenorhabditis briggsae]
Length = 259
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 163/257 (63%), Positives = 194/257 (75%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG KKHLKRL APKHWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E
Sbjct: 2 RGPKKHLKRLAAPKHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
IL QR V VDGKVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H ++ EA FK
Sbjct: 62 KILTQRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYIVHRIQAAEADFK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
LCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ KITDF+KF+ GN+
Sbjct: 122 LCKVKSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPGNLAY 181
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
VTGGRN GR+GII +RE+ G+ + IHI+DA GH FATR+ NVF IGKG+K VSLP G
Sbjct: 182 VTGGRNVGRIGIIGHRERLPGASDIIHIKDAAGHSFATRISNVFVIGKGNKALVSLPSGN 241
Query: 243 GIKLSIIEEARKRQAAQ 259
G++LSI EE KR A +
Sbjct: 242 GVRLSIAEERDKRIAQK 258
>gi|380795755|gb|AFE69753.1| 40S ribosomal protein S4, Y isoform 1 Y isoform, partial [Macaca
mulatta]
Length = 244
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 152/243 (62%), Positives = 192/243 (79%)
Query: 20 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 79
LDKL G + P+PS+GPH+ RE LPLI+ LRNRLKYALT EV I MQR + +DGKVR D
Sbjct: 1 LDKLTGGYGPRPSTGPHQLREFLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVD 60
Query: 80 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 139
TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++
Sbjct: 61 VTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPHL 120
Query: 140 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 199
T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+ MV GG N GRVG+I NRE
Sbjct: 121 ETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNRE 180
Query: 200 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 259
+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE KR A +
Sbjct: 181 RHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLATK 240
Query: 260 AAA 262
++
Sbjct: 241 QSS 243
>gi|37779112|gb|AAP20216.1| 40S ribosomal protein S4 [Pagrus major]
Length = 225
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 183/225 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DL+ KITDFIKFD N+
Sbjct: 121 YKLCKVKKLIVGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTANL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNV 225
MVTGG N GR+G+I NRE+H GSF+ +H+ D+ G+ FATRL N+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVTDSTGNNFATRLSNI 225
>gi|308491676|ref|XP_003108029.1| CRE-RPS-4 protein [Caenorhabditis remanei]
gi|308249976|gb|EFO93928.1| CRE-RPS-4 protein [Caenorhabditis remanei]
Length = 259
Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/257 (63%), Positives = 194/257 (75%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG KKHLKRL APKHWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E
Sbjct: 2 RGPKKHLKRLAAPKHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
IL QR V VDGKVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H ++ EA FK
Sbjct: 62 KILTQRIVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYIVHRIQAAEADFK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
LCKVRSV+ KG+P + T DGRTIRYPDP +K NDTI ++ KI+DF+KF+ GN+
Sbjct: 122 LCKVRSVRTLNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKISDFVKFEPGNLAY 181
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
VTGGRN GR+GII +RE+ G+ + IHI+D+ GH FATR+ NVF IGKG+K VSLP G
Sbjct: 182 VTGGRNVGRIGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPSGN 241
Query: 243 GIKLSIIEEARKRQAAQ 259
G++LSI EE KR A +
Sbjct: 242 GVRLSIAEERDKRIAQK 258
>gi|443894390|dbj|GAC71738.1| uncharacterized conserved protein [Pseudozyma antarctica T-34]
Length = 315
Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 158/290 (54%), Positives = 198/290 (68%), Gaps = 29/290 (10%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLI--------------- 45
+ RG K HLKRLNAP WMLDKL G +AP+PS+GPHK RE LPL+
Sbjct: 23 LVRGPKHHLKRLNAPSSWMLDKLSGTYAPRPSNGPHKLREALPLVVSIDSTRQIQQHPAD 82
Query: 46 --------------LVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVS 91
++LRNRLKYALT REV AI QR + VDGKVRTD TYP GF DVVS
Sbjct: 83 KPAQHRTDERDADKILLRNRLKYALTGREVNAITAQRLIKVDGKVRTDPTYPTGFQDVVS 142
Query: 92 IPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD 151
I K+ E+FR+LYD KGRF +H + EEA +KL KV+ VQ G +G+P++ T+DGRTIRYPD
Sbjct: 143 IEKSGEHFRILYDAKGRFIVHRITAEEATYKLLKVKKVQLGARGVPHVVTHDGRTIRYPD 202
Query: 152 PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQ 211
P IK NDT++ D+E KI DF+ FD G VMVTGGRN GR G+I +E+H G F+ +HI+
Sbjct: 203 PAIKVNDTVRFDIESQKILDFVTFDTGATVMVTGGRNMGRAGVITGKERHLGGFDIVHIR 262
Query: 212 DALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 261
D LG +F+TRL NVF IG KP +S+P+G G+KL+I EE +R+ + A
Sbjct: 263 DVLGRDFSTRLSNVFVIGTDGKPMISMPRGGGVKLTITEERDQRRRQKEA 312
>gi|167389537|ref|XP_001738997.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165897520|gb|EDR24644.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 390
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/265 (60%), Positives = 190/265 (71%), Gaps = 3/265 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
ARG + HLKRLNAP HWML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL RE
Sbjct: 65 FARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 124
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ R + +DGK+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AK
Sbjct: 125 VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 184
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCK+ G IPYI T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN
Sbjct: 185 FKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNT 244
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+ GG GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP
Sbjct: 245 AMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPL 304
Query: 241 GKGIK---LSIIEEARKRQAAQAAA 262
KGIK L + E K+ Q A
Sbjct: 305 DKGIKKPLLQQVNETIKKNKMQKAG 329
>gi|17543386|ref|NP_501103.1| Protein RPS-4 [Caenorhabditis elegans]
gi|75023042|sp|Q9N3X2.1|RS4_CAEEL RecName: Full=40S ribosomal protein S4
gi|351051215|emb|CCD74049.1| Protein RPS-4 [Caenorhabditis elegans]
Length = 259
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/257 (63%), Positives = 192/257 (74%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG KKHLKRL AP HWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E
Sbjct: 2 RGPKKHLKRLAAPSHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
IL QR V VDGKVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H ++ EA FK
Sbjct: 62 KILTQRVVRVDGKVRTCHKFPTGFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
LCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ KITD +KF+ GN+
Sbjct: 122 LCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAY 181
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
VTGGRN GRVGII +RE+ G+ + IHI+D+ GH FATR+ NVF IGKG+K VSLP G
Sbjct: 182 VTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGA 241
Query: 243 GIKLSIIEEARKRQAAQ 259
GI+LSI EE KR A +
Sbjct: 242 GIRLSIAEERDKRMAQK 258
>gi|428174786|gb|EKX43680.1| small subunit ribosomal protein S4e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 263
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/257 (61%), Positives = 195/257 (75%), Gaps = 1/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG +KHLKR+ APKHWMLDKL G FAP+PS+GPHK REC+PL+L++RNRLKYALTY E
Sbjct: 1 MARGPRKHLKRITAPKHWMLDKLTGVFAPRPSAGPHKLRECIPLLLLIRNRLKYALTYSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I+ R + VDGK+RTD TYP GFMDV+SI KT E+FRLL+DTKGRF LH L +A+
Sbjct: 61 AKVIMNSRSIKVDGKIRTDVTYPCGFMDVLSIEKTGEHFRLLHDTKGRFVLHRLTQADAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
KLC+V+S+ G +PYI T+DGRTIRYPDPLIK NDT+++DL N I F KF+VGN+
Sbjct: 121 HKLCRVKSLGVGINKVPYIVTHDGRTIRYPDPLIKPNDTVQIDLATNTIIGFSKFEVGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVS-LP 239
+TGG N GRVGII++ EKH GS +HI+D G +ATR NVF + G KP + +
Sbjct: 181 CAITGGHNIGRVGIIQSTEKHPGSHNIVHIKDKTGATWATRQSNVFVLATGKKPEKAYIL 240
Query: 240 KGKGIKLSIIEEARKRQ 256
+ +GIK SIIEE R+RQ
Sbjct: 241 RTQGIKHSIIEEQRRRQ 257
>gi|444721070|gb|ELW61824.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 252
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/254 (61%), Positives = 192/254 (75%), Gaps = 5/254 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLK++ APKHWMLDKL FA +PS+GPHK RECLPLI+ LRNRLKYAL E
Sbjct: 1 MVRGPKKHLKQVGAPKHWMLDKLTNVFALRPSTGPHKLRECLPLIIFLRNRLKYALAGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+Y +H + +EA+
Sbjct: 61 VKKICMQRFIKIDGKVRTDTTYPAGFMDVISIDKTRENFRLIY-----VAVHRITPQEAQ 115
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KG P++ T+D TI YPDPLIK NDTI++D+E K +DFI+FD GN+
Sbjct: 116 YKLCKVRKIFEGTKGTPHLVTHDAHTICYPDPLIKVNDTIQIDVETGKSSDFIEFDTGNL 175
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GR+G+I NRE+H GS + +H++DA + FATRL N+F IGKG KPW+SLP+
Sbjct: 176 CMVTGGANLGRIGVITNRERHPGSSDVVHVKDANDNSFATRLSNIFVIGKGHKPWISLPR 235
Query: 241 GKGIKLSIIEEARK 254
GKG+ L+I E K
Sbjct: 236 GKGVHLTIARERDK 249
>gi|399218543|emb|CCF75430.1| unnamed protein product [Babesia microti strain RI]
Length = 261
Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 156/255 (61%), Positives = 198/255 (77%)
Query: 7 KHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
KHLKR+NAP HWML KL G +APKPS GPHKSRECLPLI++LR+RLKYALTY EV I M
Sbjct: 6 KHLKRINAPSHWMLGKLRGKYAPKPSPGPHKSRECLPLIILLRDRLKYALTYDEVKLIAM 65
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
Q+ V VDGK+RTD YP G+MDVV+I +TNENFRLLYDTKGRF + EEA++KLC+V
Sbjct: 66 QKLVKVDGKIRTDTCYPIGYMDVVTIDRTNENFRLLYDTKGRFVPIKISPEEAEYKLCRV 125
Query: 127 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGG 186
+ V G K IP T+DGRTIR+ P +KA DT++LD+ K+ +F+KF++GN+ MVTGG
Sbjct: 126 KRVVLGPKEIPLAVTHDGRTIRFIHPEVKAGDTLRLDISSGKVLEFLKFEIGNLAMVTGG 185
Query: 187 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKL 246
N GRVGII +R+KH G F+ I+I+D++G+ F+TR+ NVF IGKG K +V+LPK KGIK
Sbjct: 186 HNVGRVGIITSRQKHDGGFDIINIRDSIGNSFSTRVSNVFVIGKGPKSYVTLPKYKGIKH 245
Query: 247 SIIEEARKRQAAQAA 261
+IIEE R A + +
Sbjct: 246 TIIEERNARLAKEKS 260
>gi|331216263|ref|XP_003320811.1| 40S ribosomal protein S4 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299801|gb|EFP76392.1| 40S ribosomal protein S4-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 196/255 (76%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
RG KKH+KRL AP WMLDKLGG +AP+ + GPHK RE LPL ++LR+RLKYALT REV
Sbjct: 3 VRGQKKHMKRLAAPSSWMLDKLGGTYAPRSNPGPHKLRESLPLSVLLRHRLKYALTGREV 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ QR + +D KVRTD +P GFMDV+SI K+ E+FR+++D KGRF +H + EEA +
Sbjct: 63 TLIVAQRLIKIDNKVRTDPKFPTGFMDVISIEKSGEHFRVMFDIKGRFTVHRISAEEATY 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ VQ G KG+P+I T+DGRTIRYPDP+IK NDTIK DL +NKI D + F+VGN+V
Sbjct: 123 KLCKVKRVQLGNKGVPFIVTHDGRTIRYPDPIIKVNDTIKFDLVQNKIVDTLPFEVGNLV 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M TGGRN+GRVG I +REKH G ++ +H++D + F+TR+GNV IG KP VSLP+G
Sbjct: 183 MCTGGRNQGRVGTILSREKHVGGYDIVHVRDVIDRTFSTRIGNVQVIGAHGKPSVSLPRG 242
Query: 242 KGIKLSIIEEARKRQ 256
G+KL+I EE +R+
Sbjct: 243 GGVKLTIAEERDQRR 257
>gi|188572462|gb|ACD65137.1| putative 40S ribosomal protein RPS4 [Phoronis muelleri]
Length = 229
Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 150/229 (65%), Positives = 181/229 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG +KH+KRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALTY E
Sbjct: 1 MVRGPRKHMKRLNAPKHWMLDKLGGVFAPRPSTGPHKLRECLPLMVFLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I+MQR + VDGKVRTD YPAGFMDV++I KT ENFRL+YD KGRF +H + EEA
Sbjct: 61 CKKIVMQRLIKVDGKVRTDFCYPAGFMDVITIEKTGENFRLIYDVKGRFTVHRITKEEAG 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR V G KG+P I T+DGRTIRYPDP+ K NDT+++D+ KI DFIKFD GN+
Sbjct: 121 YKLCKVRKVYTGPKGVPLIVTHDGRTIRYPDPMCKVNDTVQVDIASGKIKDFIKFDSGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 229
M+TGGRN RVG++ +RE+H GSF+ HI+D GH FAT++G IG
Sbjct: 181 CMITGGRNLRRVGLVTHRERHPGSFDVCHIKDVNGHTFATKVGKCVIIG 229
>gi|156088951|ref|XP_001611882.1| ribosomal protein S4e [Babesia bovis T2Bo]
gi|154799136|gb|EDO08314.1| ribosomal protein S4e, putative [Babesia bovis]
Length = 262
Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 195/257 (75%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG+KKH+KR+NAP HWMLDKL G +APKPS GPHK ECLPLIL+LRNRLKYALTY E
Sbjct: 1 MGRGVKKHMKRINAPSHWMLDKLSGRYAPKPSPGPHKKTECLPLILLLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQ+ V +DGKVRTD TYP GFMDVVS+ +TNE+FRLLYDTKGRF H + EEA
Sbjct: 61 VKLIVMQKVVRIDGKVRTDMTYPIGFMDVVSLERTNEHFRLLYDTKGRFVPHKITPEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V G K + T+DGRTIR+ P +K D++++DLE K+ +F KF+VGN+
Sbjct: 121 YKLCRVIKTFLGPKEVGMAVTHDGRTIRFVHPDVKPGDSLRIDLETGKVLEFFKFEVGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGG N+GRVG I ++E+H GSF+ IH++D LG+ F TR NVF IG G+ +VSLPK
Sbjct: 181 VMITGGHNQGRVGTIVHKERHPGSFDLIHVRDELGNNFCTRCSNVFVIGVGTNNYVSLPK 240
Query: 241 GKGIKLSIIEEARKRQA 257
+GIK IIE+ R A
Sbjct: 241 ERGIKKGIIEDRADRLA 257
>gi|440293545|gb|ELP86648.1| 40S ribosomal protein S4, putative [Entamoeba invadens IP1]
gi|440298945|gb|ELP91560.1| 40S ribosomal protein S4, putative [Entamoeba invadens IP1]
Length = 328
Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/255 (62%), Positives = 188/255 (73%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG + HLKRLNAP HWML KLGG FAPKPS GPH +ECLPLIL++RNRL YAL RE
Sbjct: 1 MARGDRHHLKRLNAPHHWMLSKLGGTFAPKPSGGPHGMKECLPLILIMRNRLHYALNARE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL R+V +DGKVRTD +P GFMDV+SIP+T E FRLLY+TK RF L L E++
Sbjct: 61 VQMILKNRNVKIDGKVRTDSRFPVGFMDVLSIPRTKEYFRLLYNTKRRFCLVPLSKEQST 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
KLCKV G GIPYI T+DGRTIRYP P I+ANDTIKLDL NKI DF+KFDVGN
Sbjct: 121 IKLCKVEKRTLGTFGIPYIITHDGRTIRYPHPEIQANDTIKLDLVNNKIVDFVKFDVGNT 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+ GG + GR+G++ RE H GSFE +HI+DA G F TRL NVF IGKG++ V+LP
Sbjct: 181 AMLIGGNSMGRIGVVVKREVHPGSFEIVHIKDANGTIFTTRLANVFIIGKGTETLVNLPL 240
Query: 241 GKGIKLSIIEEARKR 255
+GIK +I+ +R
Sbjct: 241 DQGIKKPLIKAVNER 255
>gi|291407691|ref|XP_002720154.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 3
[Oryctolagus cuniculus]
Length = 227
Score = 325 bits (834), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 185/225 (82%)
Query: 38 SRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNE 97
+RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFMDV+SI KT E
Sbjct: 2 ARECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGE 61
Query: 98 NFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAN 157
NFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N
Sbjct: 62 NFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVN 121
Query: 158 DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHE 217
DTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+
Sbjct: 122 DTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNS 181
Query: 218 FATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 182 FATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 226
>gi|401396346|ref|XP_003879799.1| hypothetical protein NCLIV_002520 [Neospora caninum Liverpool]
gi|325114207|emb|CBZ49764.1| hypothetical protein NCLIV_002520 [Neospora caninum Liverpool]
Length = 263
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/250 (64%), Positives = 203/250 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG +KHLKR+ AP HWMLDKL G +AP+PS GPHK RE +PL+++LRNRL+YALTYRE
Sbjct: 1 MARGPRKHLKRVAAPHHWMLDKLTGHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ I+MQR + VD KVRTD+ YPAGFMDV+SI KT E+FR+L+DTKGRF H +RDEEA
Sbjct: 61 VMMIVMQRLIKVDNKVRTDQCYPAGFMDVISIEKTKEHFRMLFDTKGRFVPHPIRDEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ V G KG+P + T+DGRT+RYP P IKA+D ++LDL KI D +KF+ GN+
Sbjct: 121 YKLCRVKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCVRLDLNTGKIVDTLKFEAGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N GRVG++ +RE+H G F+ IH++DA G+EFATR+ NVF IGKG K W+SLPK
Sbjct: 181 AMVTGGHNVGRVGVVVHRERHLGGFDIIHLRDAKGNEFATRISNVFIIGKGEKAWISLPK 240
Query: 241 GKGIKLSIIE 250
KGI+LSI+E
Sbjct: 241 EKGIRLSIME 250
>gi|115402491|ref|XP_001217322.1| 40S ribosomal protein S4 [Aspergillus terreus NIH2624]
gi|114189168|gb|EAU30868.1| 40S ribosomal protein S4-A [Aspergillus terreus NIH2624]
Length = 239
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 150/239 (62%), Positives = 188/239 (78%), Gaps = 1/239 (0%)
Query: 23 LGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 82
+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VDGKVRTD TY
Sbjct: 1 MSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIKVDGKVRTDPTY 60
Query: 83 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 142
PAGFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+
Sbjct: 61 PAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTH 120
Query: 143 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 202
D RTIRYPDP I+ NDT+K+DL KITDF++FD G + MVTGGRN GRVG++ +RE+H
Sbjct: 121 DARTIRYPDPAIRVNDTVKVDLATGKITDFVRFDTGVVCMVTGGRNMGRVGVVTHRERHD 180
Query: 203 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 261
G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A A
Sbjct: 181 GGFNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRAHAIA 238
>gi|67537248|ref|XP_662398.1| hypothetical protein AN4794.2 [Aspergillus nidulans FGSC A4]
gi|40741174|gb|EAA60364.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 239
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 149/239 (62%), Positives = 188/239 (78%), Gaps = 1/239 (0%)
Query: 23 LGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 82
+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VDGKVRTD TY
Sbjct: 1 MSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIQVDGKVRTDPTY 60
Query: 83 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 142
PAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+
Sbjct: 61 PAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKKVQLGKGGIPFLVTH 120
Query: 143 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 202
D RTIRYPDP IK NDT+K+D+ KITDF +FD G + MVTGGRN GRVG++ +RE+H
Sbjct: 121 DARTIRYPDPAIKVNDTVKVDIATGKITDFCRFDTGVVCMVTGGRNMGRVGVVTHRERHD 180
Query: 203 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 261
G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A A
Sbjct: 181 GGFNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRAYALA 238
>gi|430812711|emb|CCJ29887.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 259
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 158/259 (61%), Positives = 190/259 (73%), Gaps = 16/259 (6%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
M+DKLGG +AP+PS GPHK R+CLPLI+ LRNRLKYAL RE IAILMQR V VDGKVRT
Sbjct: 1 MVDKLGGTYAPRPSPGPHKLRDCLPLIIFLRNRLKYALNNRETIAILMQRLVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+SI +T ENFRL+YDTKGR+ +H + EA +KLCK++ VQ G K IPY
Sbjct: 61 DHTYPAGFMDVISIERTGENFRLVYDTKGRYMIHRITSMEATYKLCKIKKVQLGPKAIPY 120
Query: 139 INTYDGRTI----------------RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
T+DGRTI RYP+P I ANDT+K DL NKI I F+VG + M
Sbjct: 121 AVTHDGRTIVCIDQMLLIFLISFLQRYPNPDIHANDTVKFDLVSNKIDGHIPFEVGKLAM 180
Query: 183 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
VTGGR++GRVG+I +RE H G F+ +HI+D+L H FATRL NVF IG S PW+SLPKGK
Sbjct: 181 VTGGRSKGRVGLIIDREHHNGGFDIVHIKDSLDHTFATRLSNVFVIGDISGPWISLPKGK 240
Query: 243 GIKLSIIEEARKRQAAQAA 261
G+KL+I EE +R+ Q A
Sbjct: 241 GLKLTISEERDRRRNLQNA 259
>gi|164656677|ref|XP_001729466.1| hypothetical protein MGL_3501 [Malassezia globosa CBS 7966]
gi|159103357|gb|EDP42252.1| hypothetical protein MGL_3501 [Malassezia globosa CBS 7966]
Length = 287
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/284 (55%), Positives = 196/284 (69%), Gaps = 25/284 (8%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL-------------- 46
M RG K HLK L AP WMLDKL G +AP+PS+GPHK RE LPL+L
Sbjct: 1 MVRGPKHHLKHLAAPSSWMLDKLSGTYAPRPSTGPHKLREALPLVLCLRLAKLICEQGVA 60
Query: 47 -----------VLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKT 95
+LRNRLKYALT REV++I QR + VD KVRTD T+P GFMDVVSI K+
Sbjct: 61 LVLALAVVIWILLRNRLKYALTGREVLSITQQRIIKVDNKVRTDPTFPTGFMDVVSIEKS 120
Query: 96 NENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIK 155
E+FR+LYD KGRF +H + EEA++KL KV+ VQ G KG+P I T+DGRT+RYPDPL++
Sbjct: 121 GEHFRILYDVKGRFVVHRITAEEAQYKLLKVKRVQLGAKGVPLIVTHDGRTLRYPDPLVR 180
Query: 156 ANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALG 215
ANDT+K DL NK+ DFIKFD G VM+TGGRN GR G + +RE+H G F+ +H++D G
Sbjct: 181 ANDTVKFDLINNKMVDFIKFDTGAQVMITGGRNVGRAGQMIHRERHHGGFDIVHVRDPAG 240
Query: 216 HEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 259
EF+TRL NVF IG K W+S+P+G G+KL+I EE R Q
Sbjct: 241 REFSTRLSNVFVIGDHEKRWISMPRGGGVKLTITEERDLRLKKQ 284
>gi|440791779|gb|ELR13017.1| ribosomal family s4e, putative [Acanthamoeba castellanii str. Neff]
Length = 242
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/237 (64%), Positives = 190/237 (80%)
Query: 23 LGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 82
+GG +APKPS+GPHK REC PL+++LRNRLKYALT +EV +ILMQR V VDGKVRTD T+
Sbjct: 1 MGGTWAPKPSAGPHKMRECFPLVILLRNRLKYALTKKEVTSILMQRLVKVDGKVRTDPTF 60
Query: 83 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 142
PAGF DV++I KT+E FRLLYDTKGRF H + EE+K+KL KVR V+ G+KGIPY+ T+
Sbjct: 61 PAGFQDVITIEKTDEVFRLLYDTKGRFIAHRISAEESKYKLGKVRRVEIGKKGIPYLVTH 120
Query: 143 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 202
DGRTIRYPDP IK +DT+K+DLE KI D +KF+ GN+ MVT GRN GRVG++++RE+H
Sbjct: 121 DGRTIRYPDPSIKVHDTVKIDLETGKIVDHVKFEAGNLCMVTAGRNIGRVGLMESRERHA 180
Query: 203 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 259
GSF+ IH++DA G FATR NVF IG+ +K VSLPK KGIK SII+E + R A +
Sbjct: 181 GSFDIIHVKDAAGQTFATRGSNVFIIGQTTKSLVSLPKRKGIKTSIIQEQQHRLAKE 237
>gi|395748095|ref|XP_003778710.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Pongo abelii]
Length = 266
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/259 (58%), Positives = 187/259 (72%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G KKHLKR+ PKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT +
Sbjct: 1 MAWGPKKHLKRVAVPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDD 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DG+VR TYPAGFMDV I KT E+F L+YDTKG F ++ + EEAK
Sbjct: 61 VKKICMQRFIKIDGEVRVAITYPAGFMDVTGIEKTGEHFCLVYDTKGCFAVYRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+ LCKVR V G KGIPY+ T+D TI Y DPLIK N+T+++DL KI +FIKF GN+
Sbjct: 121 YNLCKVRKVTMGMKGIPYLVTHDTGTIHYADPLIKVNNTVQIDLGTGKIINFIKFHAGNV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG + VG+ NRE+H GS +H++DA G+ A RL N+F G GSKPW+SLP+
Sbjct: 181 CMVIGGASLSHVGVTTNRERHPGSLSVVHVRDANGNSLALRLSNIFVTGNGSKPWISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
KG +L+I EE KR A +
Sbjct: 241 EKGTRLTIAEEGEKRLATK 259
>gi|167379757|ref|XP_001735270.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165902828|gb|EDR28553.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 317
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/255 (60%), Positives = 183/255 (71%), Gaps = 3/255 (1%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHV 70
RLNAP HWML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R +
Sbjct: 2 RLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTI 61
Query: 71 LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQ 130
+DGK+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AKFKLCK+
Sbjct: 62 KIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRV 121
Query: 131 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 190
G IPYI T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN M+ GG G
Sbjct: 122 LGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMG 181
Query: 191 RVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LS 247
RVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP KGIK L
Sbjct: 182 RVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQ 241
Query: 248 IIEEARKRQAAQAAA 262
+ E K+ Q A
Sbjct: 242 QVNETIKKNKMQKAG 256
>gi|440466935|gb|ELQ36176.1| 40S ribosomal protein S4-A [Magnaporthe oryzae Y34]
gi|440478756|gb|ELQ59557.1| 40S ribosomal protein S4-A [Magnaporthe oryzae P131]
Length = 280
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/280 (58%), Positives = 195/280 (69%), Gaps = 19/280 (6%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KRL AP HW+LDKL G +APKPS GPHK RECLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLAAPSHWLLDKLSGTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
AILMQR V VDGKVRTD TYPAGFMDVVSI KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 TKAILMQRLVKVDGKVRTDSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQF----GQKGIP------------YINTYDGR--TIRYPDPLIKANDTIKL 162
+KL K G G P + + GR IRYPDPLIK NDT+K+
Sbjct: 121 YKLGKPLDQALVDPQGPLGRPEPSDLFRYEVLGWKWDFWGRNGCIRYPDPLIKVNDTVKI 180
Query: 163 DLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRL 222
+L+ KITDFIKFD G + MVT G N GRVG+I +RE+H G F +H++DA+ + F TR
Sbjct: 181 NLDTGKITDFIKFDTGALAMVTAGNNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRE 240
Query: 223 GNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
NVF IG KPW+SLPKGKG+KL+I EE +R+A A
Sbjct: 241 SNVFVIGT-EKPWISLPKGKGVKLTIAEERDRRRAQTIAG 279
>gi|55982009|gb|AAV69397.1| 40S ribosomal protein S4 [Aedes aegypti]
Length = 270
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/268 (59%), Positives = 194/268 (72%), Gaps = 12/268 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQRH+ +DGKVRTD YPAGFMDV++I KTNENFRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRHIKIDGKVRTDPNYPAGFMDVITIEKTNENFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ K+ D +KF+ GN
Sbjct: 121 YKLLKVKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNP 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRL-GNVF------TIGKGSK 233
M+TGGRN GR G + REKH GSFE +H++DA GH FATR VF T G S+
Sbjct: 181 CMITGGRNLGRCGTVIQREKHPGSFEIVHVKDATGHVFATRSEPTVFHHWVRATQGFSSR 240
Query: 234 PWVSLPKGKGI-KLSIIEEARKRQAAQA 260
PKG+G+ +L + E QA A
Sbjct: 241 ----CPKGQGVSRLVHLAEGNAEQANWA 264
>gi|296470845|tpg|DAA12960.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 233
Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 149/232 (64%), Positives = 182/232 (78%)
Query: 31 PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVV 90
PS+GPHK RECLP LRNRLKYALT EV I MQ + +DGKVRTD TYPAGFMDV+
Sbjct: 1 PSTGPHKLRECLPXNHFLRNRLKYALTGDEVKKICMQXFIKIDGKVRTDITYPAGFMDVI 60
Query: 91 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 150
I KT ENF L+YDTKGRF +H + +EAK+KLCKVR + G KGIP++ T+D R IRYP
Sbjct: 61 GIDKTGENFCLIYDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPHLVTHDARAIRYP 120
Query: 151 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
DPLIK NDTI++DLE KI DFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H+
Sbjct: 121 DPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTGGANLGRIGVISNRERHLGSFDVVHV 180
Query: 211 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
+DA G+ FAT L N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 181 KDANGNSFATWLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 232
>gi|388853330|emb|CCF52950.1| probable ribosomal protein S4.e, cytosolic [Ustilago hordei]
Length = 246
Score = 315 bits (808), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 186/243 (76%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +AP+PS+GPHK RE LPL+++LRNRLKYALT REV AI QR + +DGKVRT
Sbjct: 1 MLDKLSGTYAPRPSNGPHKLREALPLVILLRNRLKYALTGREVNAITAQRLIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYP GF DVVSI K+ E+FR+LYD KGRF +H + EEA +KL KV+ VQ G +G+P+
Sbjct: 61 DPTYPTGFQDVVSIEKSGEHFRILYDVKGRFIVHRITAEEATYKLLKVKKVQLGARGVPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
I T+DGRTIRYPDP IK NDT++ D++ KI DF+ FD G VMVTGGRN+GR G+I +
Sbjct: 121 IVTHDGRTIRYPDPAIKVNDTVRFDIDSQKILDFVAFDTGATVMVTGGRNQGRAGVIVGK 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H G F+ +HI+D LG +F+TRLGNVF IG KP +S+P+G G+ L+I EE +R+
Sbjct: 181 ERHLGGFDIVHIRDVLGRDFSTRLGNVFVIGSEGKPMISMPRGGGVALTITEERDQRRRQ 240
Query: 259 QAA 261
+ A
Sbjct: 241 KEA 243
>gi|414884607|tpg|DAA60621.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 361
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/209 (73%), Positives = 173/209 (82%), Gaps = 19/209 (9%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLN PKHWMLDKLG AFAPKPSSGPHKSRECLPLIL++RN LK ALTYREV
Sbjct: 164 ARGLKKHLKRLNVPKHWMLDKLGRAFAPKPSSGPHKSRECLPLILIIRNMLKSALTYREV 223
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ILMQRHVLVDGK+ ++P S+ +T T G FRL+ ++DE+AKF
Sbjct: 224 ISILMQRHVLVDGKM----SFP-------SLRQTR--------TTGCFRLYPIKDEDAKF 264
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
LCKVR +QFGQKGIPY+NTYD RTIRYPDPLIKANDTI +DLE NKI DFIKFDVGN++
Sbjct: 265 MLCKVRPIQFGQKGIPYMNTYDDRTIRYPDPLIKANDTITIDLETNKIMDFIKFDVGNVI 324
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHI 210
MVTGGRN GRVG+IKNREKHK SFETIH+
Sbjct: 325 MVTGGRNTGRVGVIKNREKHKSSFETIHV 353
>gi|403223747|dbj|BAM41877.1| 40S ribosomal protein S4 [Theileria orientalis strain Shintoku]
Length = 261
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/260 (58%), Positives = 192/260 (73%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKR+NAP HWMLDKL G +APK S GPHKSRECLPL+++LRNRLKYALTY E
Sbjct: 1 MGRGPKKHLKRINAPSHWMLDKLTGRYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR V VDGKVRTD TYP GFMDVVS+ +TNE FR+LYDTKGRF H + DEEA
Sbjct: 61 VKLIVKQRLVKVDGKVRTDMTYPTGFMDVVSLDRTNEKFRMLYDTKGRFCPHKITDEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ G K + T+DGRT R P +KA D++++++ KI +++KF+ GN+
Sbjct: 121 YKLCRVKKTFLGPKEVNLAVTHDGRTFRCVHPEVKAGDSLRVEVATGKILEYLKFEPGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGG N GRVG + ++EKH GSF+ +H++D+ F TR NVF IG G+K +VSLP
Sbjct: 181 VMVTGGHNVGRVGTVVSKEKHPGSFDLVHVRDSNDSTFTTRSSNVFVIGVGTKSYVSLPA 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
+GI+ +IIE+ R A A
Sbjct: 241 ERGIRKTIIEQRNLRLAKSA 260
>gi|71029346|ref|XP_764316.1| 40S ribosomal protein S4 [Theileria parva strain Muguga]
gi|68351270|gb|EAN32033.1| 40S ribosomal protein S4, putative [Theileria parva]
Length = 262
Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/257 (57%), Positives = 194/257 (75%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH+KR+NAP HWMLDKL G +APK S GPHKSRECLPL+++LRNRLKYALTY E
Sbjct: 1 MGRGPKKHMKRINAPSHWMLDKLTGRYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ QR V VDGKVRTD TYP GFMDVVS+ KTNE FR+LYDTKGRF H + DEEA
Sbjct: 61 VKLIVKQRLVKVDGKVRTDITYPTGFMDVVSLDKTNEKFRMLYDTKGRFCPHKITDEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+V+ G K + T+DGRT R P +KA D++++++ K+ +F+KF+ GN+
Sbjct: 121 YKLCRVKKTFLGPKEVNLAVTHDGRTFRCVHPEVKAGDSLRVEVSTGKVLEFLKFEPGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VM+TGG N GRVG + ++EKH GSF+ +H++D+ + F+TR NVF IG G+K +VSLP
Sbjct: 181 VMITGGHNVGRVGTVVSKEKHPGSFDLVHVKDSQDNTFSTRSSNVFVIGVGTKSYVSLPY 240
Query: 241 GKGIKLSIIEEARKRQA 257
+G++ +IIE+ +R A
Sbjct: 241 ERGLRKTIIEQRNERLA 257
>gi|414884904|tpg|DAA60918.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 361
Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 159/216 (73%), Positives = 172/216 (79%), Gaps = 10/216 (4%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKRLNAPKHWMLDKLGGAFAPKPSSG HKS+ECLPLIL++RNRLKYALTYREV
Sbjct: 141 ARGSKKHLKRLNAPKHWMLDKLGGAFAPKPSSGSHKSKECLPLILIIRNRLKYALTYREV 200
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPK----TNENFRLLYDTKGRFRLHS---L 114
I+ILMQ HVLVDGKV TDKTYPAGFMD + T R+ G+F S +
Sbjct: 201 ISILMQHHVLVDGKVTTDKTYPAGFMDKRELQAASVFTQSGMRM--PRLGQFSYTSSLIV 258
Query: 115 RDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIK 174
E C VRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 259 LVEHDDLGSC-VRSVQFGQKGIPYLNTYDDRTILYPDPLIKANDTIKIDLETNKIMDFIK 317
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
FDV N+VMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 318 FDVDNVVMVTGKRNTGRVGVIKNREKHKGSFETIHV 353
>gi|444721029|gb|ELW61786.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 219
Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 148/206 (71%), Positives = 170/206 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQWFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLKTGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFE 206
MVTGG N GR+G+I NRE+H GSFE
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFE 206
>gi|183231631|ref|XP_001913602.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|169802405|gb|EDS89621.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 318
Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 158/265 (59%), Positives = 186/265 (70%), Gaps = 11/265 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG + HLKRLNAP HWML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL RE
Sbjct: 1 MARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+ R + +DGK+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AK
Sbjct: 61 VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
L G IPYI T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN
Sbjct: 121 RVL--------GTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNT 172
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
M+ GG GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP
Sbjct: 173 AMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPL 232
Query: 241 GKGIK---LSIIEEARKRQAAQAAA 262
KGIK L + E K+ Q A
Sbjct: 233 DKGIKKPLLQQVNETIKKNKMQKAG 257
>gi|328866983|gb|EGG15366.1| 40S ribosomal protein S4 [Dictyostelium fasciculatum]
Length = 266
Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 149/250 (59%), Positives = 183/250 (73%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKRL AP HWMLDKL G +AP+P GPHK RECLPLI+++RNRLKYALT +E
Sbjct: 3 ARGPKKHLKRLAAPAHWMLDKLAGKYAPRPRPGPHKLRECLPLIILIRNRLKYALTAQEC 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
+LMQR V ++G VRTD +P GFMDV++I KT ENFRLLYDTKG F+L ++ EAKF
Sbjct: 63 TMVLMQRLVKINGVVRTDPKFPVGFMDVITIDKTKENFRLLYDTKGHFQLQRIQPSEAKF 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
L +V V+ G GIPY++T DG T RYPDP I +DT+K+DLE KI I N+
Sbjct: 123 ILTRVTKVETGIHGIPYLHTEDGHTHRYPDPEIHRHDTVKVDLETGKIAAHIPLATHNLC 182
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M+ GG N GRVGII N EKH GSF+ +I D++GH FATRL NVF IG+G +VSLP G
Sbjct: 183 MIIGGHNTGRVGIINNIEKHPGSFDVAYITDSVGHSFATRLSNVFIIGQGQTTFVSLPAG 242
Query: 242 KGIKLSIIEE 251
KG++ S ++E
Sbjct: 243 KGVRRSAVDE 252
>gi|219110737|ref|XP_002177120.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411655|gb|EEC51583.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 261
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/249 (58%), Positives = 185/249 (74%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAP HW L K+ G FAPKPS GPHK RECLP+ + LR+RLKYALT +E
Sbjct: 1 MPRGPKKHLKRLNAPSHWNLGKMTGVFAPKPSPGPHKERECLPICIALRDRLKYALTNKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ I M+R V VDGKVRTD YP GFMDVV + K+ + FR+L+D+KGRF LH + EE++
Sbjct: 61 CMQICMERCVKVDGKVRTDHNYPTGFMDVVELEKSGDRFRILFDSKGRFVLHRINREESQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC++ + G K IP T+DGRTIRYPDP K NDT+K+DL K++D IKF++G +
Sbjct: 121 YKLCRINKIYIGSKKIPVAVTHDGRTIRYPDPDAKVNDTVKVDLATGKMSDIIKFELGAM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
V + GRN GRVG + + E+H SF+ + ++DA GH FATRL NVF IG G+ P +SLPK
Sbjct: 181 VTLVRGRNAGRVGTLMHIERHLNSFDIVTVKDAKGHTFATRLHNVFVIGNGTTPQISLPK 240
Query: 241 GKGIKLSII 249
G+GIK SII
Sbjct: 241 GRGIKKSII 249
>gi|223996813|ref|XP_002288080.1| RS4, ribosomal protein 4 [Thalassiosira pseudonana CCMP1335]
gi|220977196|gb|EED95523.1| RS4, ribosomal protein 4 [Thalassiosira pseudonana CCMP1335]
Length = 261
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 143/257 (55%), Positives = 192/257 (74%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAP+HW L K+GG +APKPS+GPHK RECLP+ ++LR RLKYALT +E
Sbjct: 1 MARGPKKHLKRLNAPRHWNLGKMGGVWAPKPSAGPHKQRECLPVAIILRERLKYALTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I M+R V +DGKVRTD YPAGFMDVV + K+ + FRLLYDTKGRF LH ++ +EA+
Sbjct: 61 CQQICMERCVKIDGKVRTDHNYPAGFMDVVELEKSGDRFRLLYDTKGRFVLHRIQKDEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+++ K +P T+DGRT+R+PDP + NDT+K+++ K++D KF++G +
Sbjct: 121 YKLCRIQKGYMSAKKVPVAVTHDGRTLRFPDPDVAVNDTVKVNIATGKMSDIYKFEIGAM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+MVT G N GRVG +++ EKH GSF + I+D G+ FATR NVF IG G P V+LPK
Sbjct: 181 IMVTKGHNAGRVGTLEHVEKHDGSFSIVTIKDKKGNTFATRQANVFVIGSGDHPQVTLPK 240
Query: 241 GKGIKLSIIEEARKRQA 257
G+GIK +I++E + +A
Sbjct: 241 GRGIKKTILQERAEAEA 257
>gi|159114046|ref|XP_001707248.1| Ribosomal protein S4 [Giardia lamblia ATCC 50803]
gi|157435352|gb|EDO79574.1| Ribosomal protein S4 [Giardia lamblia ATCC 50803]
Length = 268
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/261 (57%), Positives = 195/261 (74%), Gaps = 3/261 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG++KHLKRLNAPKHW+LDK+GG +AP+P++GPH REC+PLIL+LRNRL YA TY E
Sbjct: 1 MARGVRKHLKRLNAPKHWLLDKMGGIWAPRPTNGPHGLRECIPLILILRNRLHYANTYAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
IL ++VL+DGK RTD T+P GFMDV IPK ++ FR+LYD KGRF L ++ EA
Sbjct: 61 TSMILQDKNVLIDGKPRTDPTFPVGFMDVFEIPKVHKTFRVLYDVKGRFTLVPIQSNEAG 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLC+V+ + G KG+PY++T+D RTIR+P P IK NDTIK++L+ KI ++ KFD+G I
Sbjct: 121 FKLCRVQKIFLGDKGMPYLSTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GR+G I+ +KH GS+ I ++D G EF TRL NVF IG S P V++P
Sbjct: 181 VMVTGGRNCGRIGTIQAIDKHMGSYTMIRMKDTEGTEFLTRLCNVFVIGNDS-PAVAIPT 239
Query: 241 GKGIKLSIIE--EARKRQAAQ 259
KGI+ II+ E R R A+
Sbjct: 240 TKGIRPDIIKNRELRLRSIAK 260
>gi|308161402|gb|EFO63851.1| Ribosomal protein S4 [Giardia lamblia P15]
Length = 268
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/261 (57%), Positives = 195/261 (74%), Gaps = 3/261 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG++KHLKRLNAPKHW+LDK+GG +AP+P++GPH REC+PL+L+LRNRL YA TY E
Sbjct: 1 MARGVRKHLKRLNAPKHWLLDKMGGIWAPRPTNGPHGLRECIPLVLILRNRLHYANTYAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
IL ++VL+DGK RTD T+P GFMDV IPK ++ FR+LYD KGRF L ++ EA
Sbjct: 61 TSMILQDKNVLIDGKPRTDPTFPIGFMDVFEIPKVHKTFRVLYDVKGRFTLVPIQSNEAG 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLC+V+ + G KG+PY++T+D RTIR+P P IK NDTIK++L+ KI ++ KFD+G I
Sbjct: 121 FKLCRVQKIFLGDKGMPYLSTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GR+G I+ +KH GS+ I ++D G EF TRL NVF IG S P V++P
Sbjct: 181 VMVTGGRNCGRIGTIQAIDKHMGSYTMIRMKDTEGTEFLTRLCNVFVIGNDS-PAVAIPP 239
Query: 241 GKGIKLSIIE--EARKRQAAQ 259
KGI+ II+ E R R A+
Sbjct: 240 TKGIRPDIIKNRELRLRSIAK 260
>gi|324508881|gb|ADY43745.1| 40S ribosomal protein S4 [Ascaris suum]
Length = 221
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/221 (64%), Positives = 172/221 (77%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG K+HLKRL AP HWMLDKLGG FAP+P+SGPHK RE LPLIL LRNRLKYAL+Y E
Sbjct: 1 MARGPKRHLKRLAAPHHWMLDKLGGVFAPRPTSGPHKLRESLPLILFLRNRLKYALSYNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I QR + +DGKVRT+ +PAGFMDV++I KTNE FRLLYD KGR+ +H + + E +
Sbjct: 61 ARMICKQRLIKIDGKVRTEMRFPAGFMDVITIEKTNETFRLLYDAKGRYTVHRITEAEGR 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV G KG+P+I T+D RTIRYPDP +K NDTI LD+ K D++KFD GN+
Sbjct: 121 FKLCKVVKKSVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVLDIASGKFNDYVKFDQGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 221
MVTGGRN GRVG++ +REKH GSF+ +H++DA GH FATR
Sbjct: 181 CMVTGGRNMGRVGVVGHREKHPGSFDIVHVKDAAGHTFATR 221
>gi|393912410|gb|EJD76721.1| 40S ribosomal protein S4, variant [Loa loa]
Length = 222
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/222 (64%), Positives = 171/222 (77%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG K+HLKRL APKHWMLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E
Sbjct: 1 MARGPKRHLKRLAAPKHWMLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I QR + VDGKVRTD +PAGFMDV+ I +TNE FRLLYD KGR+ H + ++E
Sbjct: 61 ARMICKQRLIKVDGKVRTDMRFPAGFMDVIRIDRTNETFRLLYDAKGRYATHRITEQEGN 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCK+ G KG+P+I T+D RTIRYPDP +K NDTI +D+ K++D++KFD GN+
Sbjct: 121 FKLCKIVKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIMVDIATGKMSDYVKFDQGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRL 222
MVTGGRN GRVGI+ +REKH GSF+ +HI+DA GH FATR
Sbjct: 181 CMVTGGRNMGRVGIVGHREKHPGSFDIVHIKDAAGHSFATRF 222
>gi|412985609|emb|CCO19055.1| 40S ribosomal protein S4 [Bathycoccus prasinos]
Length = 276
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/222 (63%), Positives = 172/222 (77%)
Query: 35 PHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPK 94
PHKSRECLPL L+LRNRLKYAL Y+EV IL QR V VDGK+R +K YP G MDVV I K
Sbjct: 53 PHKSRECLPLCLILRNRLKYALNYKEVTTILQQRLVKVDGKIRMEKCYPCGIMDVVDIEK 112
Query: 95 TNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLI 154
T+E+FRL+YD KGRF +H + EA++KLCKV + G KG+P + +D RTIRYPDP+I
Sbjct: 113 TDEHFRLMYDQKGRFVVHRITGIEAQYKLCKVIKKKLGDKGVPCVQLHDSRTIRYPDPMI 172
Query: 155 KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL 214
K D++ +D+ NKITDF+KFD G + MVTGGRN GRVGI+ REKHKGSFE +H+ DA
Sbjct: 173 KEGDSVMVDIASNKITDFVKFDAGALCMVTGGRNAGRVGIVNRREKHKGSFEVVHLTDAA 232
Query: 215 GHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 256
G FATR NVF IG G+KP VSLPKGKGIKL+I+EE RK++
Sbjct: 233 GQNFATRFSNVFAIGTGNKPMVSLPKGKGIKLTILEEQRKQE 274
>gi|160331849|ref|XP_001712631.1| rps4 [Hemiselmis andersenii]
gi|159766080|gb|ABW98306.1| rps4 [Hemiselmis andersenii]
Length = 250
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/245 (60%), Positives = 182/245 (74%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G+KKHLKRL APK W L KLGG +AP P SGPHK E PLIL+LRNRLKYAL +E
Sbjct: 1 MAHGIKKHLKRLRAPKRWKLTKLGGIWAPNPKSGPHKKFESFPLILILRNRLKYALNNQE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ IL QR + VD K+RT+K YPAG MD++SI KT ENFRLL DT GRF LH + ++E+
Sbjct: 61 AVQILQQRSIKVDKKIRTEKNYPAGLMDIISIEKTEENFRLLVDTFGRFILHRIEEKESM 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV GQ+GIPYI T+DGRTIR+PDP IK NDTI DL E KI DFIKF+VG++
Sbjct: 121 FKLCKVTKSTKGQRGIPYIVTHDGRTIRFPDPFIKTNDTILFDLSEKKIIDFIKFEVGSL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
++TGG N GR+GI+ + K+ E I ++DA G EF+T+ +F IGKG K ++SLPK
Sbjct: 181 CIITGGPNVGRIGIVLQQGKNFLEEEMIKLKDAKGSEFSTKFSFIFVIGKGKKSFISLPK 240
Query: 241 GKGIK 245
GKGI+
Sbjct: 241 GKGIR 245
>gi|443916876|gb|ELU37810.1| 40s ribosomal protein s4 [Rhizoctonia solani AG-1 IA]
Length = 331
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 172/221 (77%)
Query: 28 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 87
AP+PS GPHK RE LPL + LRNRLKYALT REV I+ QR + VDGKVRTD TYP G+M
Sbjct: 96 APRPSPGPHKLRESLPLTIFLRNRLKYALTGREVTTIVAQRLIKVDGKVRTDNTYPTGYM 155
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
DV+SI K+ E+FRLLYD KGRF +H + EEA +KL KVR G +G+PYI T+DGRTI
Sbjct: 156 DVISIEKSGEHFRLLYDVKGRFVIHRITPEEATYKLLKVRKTAVGARGVPYIVTHDGRTI 215
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
RYPDP IK NDT+K D+ KIT+F+KFD GN+VM+TGGRN GRVG I +RE+H G F+
Sbjct: 216 RYPDPQIKVNDTVKFDITTGKITEFVKFDTGNLVMITGGRNMGRVGTITHRERHVGGFDI 275
Query: 208 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 248
+H++D L FATR+ N+F IG+GSK W+SLPKGKG KL+I
Sbjct: 276 VHVKDVLDRTFATRISNIFVIGEGSKAWISLPKGKGTKLTI 316
>gi|221055832|ref|XP_002259054.1| ribosomal protein s4 [Plasmodium knowlesi strain H]
gi|193809125|emb|CAQ39827.1| ribosomal protein s4, putative [Plasmodium knowlesi strain H]
Length = 261
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 195/259 (75%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M +G+KKH+KR+NAP HWML+K+GG +APK SSGPH+ E +PL+++LRNRLKYALT+ E
Sbjct: 1 MGKGIKKHMKRVNAPSHWMLNKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL+Q+ V VD K+RTD T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K
Sbjct: 61 VKMILIQKIVKVDNKIRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + + + T+DGR+I Y P +K NDT++LDLE K+ + +KF +G++
Sbjct: 121 YKLCKVKKIILRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVT G + GRVGII + +K+ G+++ IH++D+ G FATRL NVF IG SKP++SLP+
Sbjct: 181 VMVTAGHSVGRVGIISSIDKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
KGIKL IIEE R + AQ
Sbjct: 241 EKGIKLDIIEERRNKLKAQ 259
>gi|209879451|ref|XP_002141166.1| 40S ribosomal protein S4 [Cryptosporidium muris RN66]
gi|209556772|gb|EEA06817.1| 40S ribosomal protein S4, putative [Cryptosporidium muris RN66]
Length = 261
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 141/251 (56%), Positives = 190/251 (75%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ AP +WMLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY+E
Sbjct: 1 MARGPKKHLKRVAAPSNWMLDKLTGIYAPRPSSGPHKLRECIPLAILLRNRLKFALTYQE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGKVRTD +P G MDV++I + N+N R++YDTKGRF + +EA+
Sbjct: 61 VKYIVMQRLIKVDGKVRTDTCFPLGLMDVITIDRINKNMRIMYDTKGRFVPVQVSSKEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV V G KG+P T D RT+RY P I+ANDT+K+DLE K+ +FIK +VGN+
Sbjct: 121 YKLCKVTRVALGPKGVPTATTNDARTLRYIHPEIRANDTVKIDLETGKVMEFIKCEVGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VTGGR++GRVG+I + E+ +G+ + ++D GH FAT + N+F +G+G K V+LPK
Sbjct: 181 CTVTGGRSQGRVGVITHLERKQGAQCIVSVRDKKGHTFATLIKNIFVLGEGDKSLVTLPK 240
Query: 241 GKGIKLSIIEE 251
KGI+LS +E+
Sbjct: 241 DKGIRLSNVED 251
>gi|258597201|ref|XP_001347741.2| 40S ribosomal protein S4, putative [Plasmodium falciparum 3D7]
gi|254832593|gb|AAN35654.2| 40S ribosomal protein S4, putative [Plasmodium falciparum 3D7]
Length = 261
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/258 (55%), Positives = 193/258 (74%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M +G+KKHLKR+NAP HWML+K+GG +APK SSGPHK E +PL+++LRNRLKYALT+ E
Sbjct: 1 MGKGIKKHLKRVNAPSHWMLNKMGGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL+Q+ V VD KVRTD T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K
Sbjct: 61 VKMILIQKIVKVDNKVRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + + + T+DGR+I Y P +K NDT++LDLE K+ + +KF VG++
Sbjct: 121 YKLCKVKKILLRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQVGSL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVT G + GRVG+I + +K+ G+++ IH++D+ FATRL NVF IG +KP++SLP+
Sbjct: 181 VMVTAGHSVGRVGVISSIDKNMGTYDIIHVKDSRNKVFATRLSNVFVIGDNTKPYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAA 258
KGIKL IIEE R R A
Sbjct: 241 EKGIKLDIIEERRNRLKA 258
>gi|56199522|gb|AAV84250.1| ribosomal protein S4 [Culicoides sonorensis]
Length = 211
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 169/210 (80%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKRL+APK WMLDKLGG FAP+PS GPH+ RE LPL++ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRLHAPKAWMLDKLGGVFAPRPSQGPHRLRESLPLVIFLRNRLKYALTNSEV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+MQR + VDGKVRTD +PAGFMDV++I KTNE FRL+YD KGRF +H + EEAK+
Sbjct: 61 TKIVMQRLIKVDGKVRTDSNFPAGFMDVITIEKTNEYFRLIYDVKGRFTVHRISAEEAKY 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ G K +PY+ T+DGRTIR+PDPLIK NDT++LD+ KITD IKF+ GN+
Sbjct: 121 KLCKVKKTCVGPKKVPYLITHDGRTIRFPDPLIKINDTVQLDIATGKITDTIKFESGNLC 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQ 211
M+TGGRN GRVG + NREKH GSFE +HIQ
Sbjct: 181 MITGGRNLGRVGTVMNREKHPGSFEIVHIQ 210
>gi|296470835|tpg|DAA12950.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 223
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/222 (64%), Positives = 175/222 (78%)
Query: 41 CLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR 100
CLPLI LRNRLKYALT EV I MQ + +DGKVRTD TYPAGFMDV+ I KT ENFR
Sbjct: 1 CLPLITFLRNRLKYALTGDEVKKIGMQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFR 60
Query: 101 LLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTI 160
L+YDTKGRF +H + +EAK+KLCKVR + G KGIP++ T+D R IRYPDPLIK NDTI
Sbjct: 61 LIYDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTI 120
Query: 161 KLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 220
+ DLE KITDFIKFD GN+ VTGG N GR+G+I NRE+H GSF+ +H++DA G+ FAT
Sbjct: 121 QTDLETGKITDFIKFDTGNLCKVTGGANLGRIGVISNRERHPGSFDVVHVKDANGNSFAT 180
Query: 221 RLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
L N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 181 WLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 222
>gi|156098302|ref|XP_001615183.1| 40S ribosomal protein S4 [Plasmodium vivax Sal-1]
gi|148804057|gb|EDL45456.1| 40S ribosomal protein S4, putative [Plasmodium vivax]
Length = 261
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 195/259 (75%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M +G+KKH+KR+NAP HWML+K+GG +APK SSGPH+ E +PL+++LRNRLKYALT+ E
Sbjct: 1 MGKGIKKHMKRVNAPSHWMLNKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL+Q+ V VD K+RTD T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K
Sbjct: 61 VKMILIQKIVKVDNKIRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV+ + + + T+DGR+I Y P +K NDT++LDLE K+ + +KF +G++
Sbjct: 121 YKLCKVKKMILRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVT G + GRVGII + +K+ G+++ IH++D+ G FATRL NVF IG SKP++SLP+
Sbjct: 181 VMVTAGHSVGRVGIISSIDKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPR 240
Query: 241 GKGIKLSIIEEARKRQAAQ 259
KGIKL IIEE R + AQ
Sbjct: 241 EKGIKLDIIEERRNKLKAQ 259
>gi|397590955|gb|EJK55222.1| hypothetical protein THAOC_25064 [Thalassiosira oceanica]
Length = 261
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/257 (55%), Positives = 192/257 (74%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAP+HW L K+GG +APKPS+GPHK RECLP+ ++LR RLKYALT +E
Sbjct: 1 MGRGPKKHLKRLNAPRHWNLGKMGGVWAPKPSAGPHKQRECLPVAIILRERLKYALTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I M+R V +DGKVRTD YPAGFMD+V + K+ + FRLLYDTKGRF LH + +EA+
Sbjct: 61 CQQICMERCVKIDGKVRTDYNYPAGFMDIVELEKSGDIFRLLYDTKGRFVLHRVDKKEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLC+++ V K IP T+DGRT+R+PDP +K NDT+K+++ K+ + F++G++
Sbjct: 121 WKLCRIQKVYVTAKKIPVAVTHDGRTLRFPDPNVKVNDTVKVNIATGKMGEIFPFEMGSV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVT G N GRVGI+++ EKH GSF + ++D G+ FATR NVF IG G + +SLPK
Sbjct: 181 VMVTKGHNAGRVGILQHLEKHDGSFSIVTVKDKKGNVFATRQSNVFIIGAGERVELSLPK 240
Query: 241 GKGIKLSIIEEARKRQA 257
G+GIK +II+E + +A
Sbjct: 241 GRGIKKNIIQERAEAEA 257
>gi|160550143|gb|ABX44776.1| putative 40S ribosomal protein RPS4 [Flustra foliacea]
Length = 214
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 170/214 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPKHWMLDKL G FAP+PSSGPHK RE LP+IL +RNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLNAPKHWMLDKLSGVFAPRPSSGPHKLRESLPIILFIRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I+MQR + VD KVRTD T+PAGFMDV+SI KT+ENFRL+YD KGRF +H + EEA
Sbjct: 61 AKKIVMQRLIKVDNKVRTDLTFPAGFMDVISIEKTSENFRLIYDVKGRFAIHRITAEEAT 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV G KG+PY+ T+DGRTIRYPDPL+K NDTI+++ + KI DFIKF+ GN+
Sbjct: 121 YKLCKVAKQCTGPKGVPYVTTHDGRTIRYPDPLVKVNDTIQVNTQTGKIMDFIKFEGGNM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL 214
M+TGG N GRVG I + EKH GSF H++DAL
Sbjct: 181 CMITGGHNIGRVGQIVHVEKHPGSFHIGHVKDAL 214
>gi|444729526|gb|ELW69939.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 248
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 174/213 (81%)
Query: 50 NRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRF 109
NRLKYALT EV I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF
Sbjct: 35 NRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRF 94
Query: 110 RLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKI 169
+H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KI
Sbjct: 95 AVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKI 154
Query: 170 TDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 229
+DFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IG
Sbjct: 155 SDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIG 214
Query: 230 KGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
KG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 215 KGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 247
>gi|84997205|ref|XP_953324.1| 40s ribosomal protein s4 [Theileria annulata strain Ankara]
gi|65304320|emb|CAI76699.1| 40s ribosomal protein s4, putative [Theileria annulata]
Length = 254
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 142/249 (57%), Positives = 187/249 (75%)
Query: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR 68
+KR+NAP HWMLDKL G +APK S GPHKSRECLPL+++LRNRLKYALTY EV I+ QR
Sbjct: 1 MKRINAPSHWMLDKLTGKYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDEVKLIVKQR 60
Query: 69 HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRS 128
V VDGKVRTD TYP GFMDVVS+ KTNE FR+LYDTKGRF H + DEEA +KLC+V+
Sbjct: 61 LVKVDGKVRTDITYPTGFMDVVSLDKTNEKFRMLYDTKGRFCPHKITDEEATYKLCRVKK 120
Query: 129 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRN 188
G K + T+DGRT R P +KA D++++++ K+ +F+KF+ GN+VM+TGG N
Sbjct: 121 TFLGPKEVNLAVTHDGRTFRCVHPEVKAGDSLRVEVSTGKVLEFLKFEPGNLVMITGGHN 180
Query: 189 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 248
GRVG + ++EKH GSF+ +H++D+ F+TR NVF IG G+K +VSLP +G++ +I
Sbjct: 181 VGRVGTVVSKEKHPGSFDLVHVKDSQDSTFSTRSTNVFVIGVGTKSYVSLPAERGLRKTI 240
Query: 249 IEEARKRQA 257
IE+ +R A
Sbjct: 241 IEQRNERLA 249
>gi|70946979|ref|XP_743149.1| ribosomal protein S4 [Plasmodium chabaudi chabaudi]
gi|56522509|emb|CAH81099.1| ribosomal protein S4, putative [Plasmodium chabaudi chabaudi]
Length = 266
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 191/258 (74%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
+G+KKH+KR+NAP HWML+K+ G +APK SSGPHK E +PL+++LRNRLKYALT+ EV
Sbjct: 7 GKGIKKHMKRVNAPSHWMLNKMDGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEV 66
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL+Q+ V VD K RTD T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+
Sbjct: 67 KMILIQKIVKVDNKTRTDCTFPVGLMDVIHITKSNEYFRLLYDVKGRFVPHRITNEESKY 126
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ + + + T+DGR+I Y P +K NDTI+LDLE K+ + +KF VGN+V
Sbjct: 127 KLCKVKKIILRKGKLSIAITHDGRSIPYIHPEVKVNDTIRLDLESGKVLEHLKFQVGNMV 186
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVT G + GRVG I + +K+ G+++ IH++D+ G FATRL N+F IG +KP++SLP+
Sbjct: 187 MVTAGHSVGRVGTILSIDKNIGTYDIIHVKDSRGKVFATRLSNIFVIGDATKPYISLPRE 246
Query: 242 KGIKLSIIEEARKRQAAQ 259
KGIKL IIEE R R AQ
Sbjct: 247 KGIKLDIIEERRNRLKAQ 264
>gi|399949930|gb|AFP65586.1| 40S ribosomal protein S4 [Chroomonas mesostigmatica CCMP1168]
Length = 250
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/245 (58%), Positives = 188/245 (76%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA+GLKKHLKRL APK+W L+KLGG +AP P SGPHK E P+IL+LRN+LKYAL RE
Sbjct: 1 MAKGLKKHLKRLKAPKNWKLEKLGGIWAPSPQSGPHKKMESFPIILILRNKLKYALNNRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ IL +++V +D K+RT+K YP G MDV+S+ KTNENFRLLYDT GRF LH + +E+
Sbjct: 61 VLQILKKKNVKIDKKIRTEKNYPTGIMDVISLEKTNENFRLLYDTFGRFVLHRIEQKESF 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCK+ + GQ+GIPYI T+DGRT R+PDP +K NDTI +L E KI DFIKFDVG++
Sbjct: 121 FKLCKIVKLTKGQRGIPYITTHDGRTCRFPDPFVKKNDTILFNLSEKKIIDFIKFDVGSL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
++TGG N GR+GI+ +EK+ G E I ++D+ G EF +++ +F IGKG K ++SLPK
Sbjct: 181 CLITGGNNIGRIGIVMQQEKNSGPAEMIRLKDSEGFEFFSKMSYIFVIGKGKKSFISLPK 240
Query: 241 GKGIK 245
KG++
Sbjct: 241 EKGLR 245
>gi|389583604|dbj|GAB66338.1| 40S ribosomal protein S4, partial [Plasmodium cynomolgi strain B]
Length = 260
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/258 (55%), Positives = 194/258 (75%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
+G+KKH+KR+NAP HWML+K+GG +APK SSGPH+ E +PL+++LRNRLKYALT+ EV
Sbjct: 1 GKGIKKHMKRVNAPSHWMLNKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDEV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL+Q+ V VD K+RTD T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+
Sbjct: 61 KMILIQKIVKVDNKIRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKY 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ + + + T+DGR+I Y P +K NDT++LDLE K+ + +KF +G++V
Sbjct: 121 KLCKVKKMILRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSMV 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVT G + GRVGII + +K+ G+++ IH++D+ G FATRL NVF IG SKP++SLP+
Sbjct: 181 MVTAGHSVGRVGIISSIDKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPRE 240
Query: 242 KGIKLSIIEEARKRQAAQ 259
KGIKL IIEE R + AQ
Sbjct: 241 KGIKLDIIEERRNKLKAQ 258
>gi|290983375|ref|XP_002674404.1| predicted protein [Naegleria gruberi]
gi|284087994|gb|EFC41660.1| predicted protein [Naegleria gruberi]
Length = 274
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/255 (58%), Positives = 193/255 (75%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG +KH KR+ APKHWM+ KLGG +APKP G H +RE LPL+L+LRNRLKYA T +E
Sbjct: 1 MARGPRKHTKRIAAPKHWMMSKLGGVYAPKPKPGAHAARESLPLLLLLRNRLKYAATAKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL QR V VDG VRTDK+YP+GF DV+SI KTNE+FRLL+DTKGRF +H + + EA
Sbjct: 61 VNVILKQRLVKVDGLVRTDKSYPSGFNDVISIDKTNEHFRLLFDTKGRFVIHPISEREAN 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKV +G+PYI T DGR IR+PDP IK NDT+K+D+E K+T + F+ GN+
Sbjct: 121 YKLCKVTKRGTATQGVPYIQTNDGRLIRFPDPSIKVNDTVKVDIETGKVTKSVHFESGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGG N+GR+G I NRE H GSFE +H++D G+ F TR NVF +G+G ++LPK
Sbjct: 181 CMVTGGHNQGRIGEIVNRELHPGSFEIVHVKDIAGNNFTTRANNVFVLGQGHSSMITLPK 240
Query: 241 GKGIKLSIIEEARKR 255
GKG+KL+++E+ +K+
Sbjct: 241 GKGLKLNVVEDRKKQ 255
>gi|167393127|ref|XP_001740437.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165895490|gb|EDR23170.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 308
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/247 (59%), Positives = 176/247 (71%), Gaps = 3/247 (1%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AKFKLCK+ G IPY
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
I T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN M+ GG GRVG+I R
Sbjct: 121 IVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKR 255
E H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP KGIK L + E K+
Sbjct: 181 EVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKK 240
Query: 256 QAAQAAA 262
Q A
Sbjct: 241 NKMQKAG 247
>gi|253741437|gb|EES98307.1| Ribosomal protein S4 [Giardia intestinalis ATCC 50581]
Length = 267
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/261 (56%), Positives = 192/261 (73%), Gaps = 3/261 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG +KHLKRLNAPKHW+LDK+GG +AP+P++GPH REC+PLIL+LRNRL YA TY E
Sbjct: 1 MARGPRKHLKRLNAPKHWLLDKMGGIWAPRPTNGPHGLRECIPLILILRNRLHYANTYAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
IL ++VL+D K R D T+P GFMDV IPK ++ FR+LYD KGRF L ++ EA
Sbjct: 61 TNMILKDKNVLIDNKPRIDPTFPIGFMDVFEIPKVHKVFRVLYDVKGRFTLIPIQSNEAG 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLC+V+ + G KG+PY+ T+D RTIR+P P IK NDTIK++L+ KI ++ KFD+G +
Sbjct: 121 FKLCRVQKIFLGDKGMPYLVTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRN GR+G I+ +KH GS+ I ++D+ G EF TRL NVF IG S P V++P
Sbjct: 181 VMVTGGRNCGRIGTIQAIDKHMGSYTMIRMKDSEGAEFITRLCNVFIIGNDS-PAVTVPS 239
Query: 241 GKGIKLSIIE--EARKRQAAQ 259
KGI+ II+ E R R A+
Sbjct: 240 TKGIRPDIIKNRELRLRSIAK 260
>gi|319443378|pdb|2XZM|W Chain W, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443413|pdb|2XZN|W Chain W, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|315570299|tpg|DAA33968.1| TPA_exp: 40S ribosomal protein rpS4e [Tetrahymena thermophila]
Length = 260
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/257 (56%), Positives = 189/257 (73%), Gaps = 2/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+NAPK WML+KLGG +A +PS GPHK RE LPL ++L+ RL YAL R+
Sbjct: 1 MARGPKKHLKRINAPKSWMLNKLGGIWATRPSQGPHKLRESLPLSVLLKERLNYALNGRD 60
Query: 61 VIAIL--MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE 118
V IL +++V VDGKVR DK YP G MDVV I KT+++FR+LYDTKGRF L SL EE
Sbjct: 61 VTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEE 120
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
AK+KL KV + G IPYI T+D RTIR+P+P IK DT+K DL NKI +F + G
Sbjct: 121 AKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESG 180
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
N+ + G N GRVGII++ EKH+GSF+ H++DA G+ FATRLGN+F +G+G K W+ L
Sbjct: 181 NVCYIQQGNNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIEL 240
Query: 239 PKGKGIKLSIIEEARKR 255
P G G++ +I+EE +++
Sbjct: 241 PSGDGVRETILEERKRK 257
>gi|407918333|gb|EKG11604.1| Ribosomal protein S4e [Macrophomina phaseolina MS6]
Length = 221
Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/221 (66%), Positives = 174/221 (78%), Gaps = 1/221 (0%)
Query: 42 LPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRL 101
+PLI+ +RNRLKYAL RE AI+MQR V VDGKVRTD TYPAGFMDV+SI KT ENFRL
Sbjct: 1 MPLIVFIRNRLKYALNGRETKAIMMQRLVKVDGKVRTDVTYPAGFMDVISIEKTGENFRL 60
Query: 102 LYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIK 161
+YDTKGRF +H + EEA++KL KVR VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K
Sbjct: 61 VYDTKGRFTVHRITAEEAEYKLGKVRRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVK 120
Query: 162 LDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 221
+DL KITDFIKFD G I M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR
Sbjct: 121 IDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFATR 180
Query: 222 LGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
NVF IG+ KPW+SLPKGKG+KLSI EE +R+A A
Sbjct: 181 ESNVFIIGR-EKPWISLPKGKGVKLSIAEERDRRRAYALAG 220
>gi|68073433|ref|XP_678631.1| ribosomal protein S4 [Plasmodium berghei strain ANKA]
gi|56499160|emb|CAI00409.1| ribosomal protein S4, putative [Plasmodium berghei]
Length = 260
Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 190/258 (73%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
+G+KKH+KR+NAP HWML+K+ G +APK SSGPHK E +PL+++LRNRLKYALT+ EV
Sbjct: 1 GKGIKKHMKRVNAPSHWMLNKMDGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL+Q+ V VD K RTD T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+
Sbjct: 61 KMILIQKIVKVDNKTRTDCTFPVGLMDVIHITKSNEFFRLLYDVKGRFVPHRITNEESKY 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV+ + + + T+DGR+I Y P +K NDTI+LDLE K+ + +KF VGN+V
Sbjct: 121 KLCKVKKIILRKGKLSIAITHDGRSIPYIHPEVKVNDTIRLDLETGKVLEHLKFQVGNMV 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVT G + GRVG I + +K+ G+++ IH++D+ G FATRL N+F IG KP++SLP+
Sbjct: 181 MVTAGHSVGRVGTILSIDKNIGTYDIIHVKDSRGKIFATRLSNIFVIGDALKPYISLPRE 240
Query: 242 KGIKLSIIEEARKRQAAQ 259
KGIKL IIEE R R AQ
Sbjct: 241 KGIKLDIIEERRNRLKAQ 258
>gi|340509077|gb|EGR34650.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
Length = 260
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/257 (55%), Positives = 188/257 (73%), Gaps = 2/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKR+ APK WM+ KLGG + +PS GPHK RE LPL ++L+NRL YAL R+
Sbjct: 1 MVRGPKKHLKRICAPKSWMISKLGGIWVTRPSQGPHKLRESLPLFVLLKNRLNYALNGRD 60
Query: 61 VIAIL--MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE 118
V IL +++V VDGK R D+++P G MDVVSIPKT+E FR+LYDTKGRF L +L +E
Sbjct: 61 VTLILNDKEQNVFVDGKCRRDRSFPTGLMDVVSIPKTDEQFRVLYDTKGRFVLKTLNKQE 120
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
A+FKL KV+ G +PYI T+D RTIR+P+P IK DTIK D+ +NKI +F + G
Sbjct: 121 AQFKLLKVKGKAIGPNQVPYIVTHDSRTIRFPNPNIKIGDTIKYDIVKNKILEFAHLESG 180
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
NI V G N GRVG+I + EKH GSF+ +H++D G+ FATR+GN+F IG+G KPWVSL
Sbjct: 181 NICFVQNGNNIGRVGLITHIEKHPGSFDIVHVKDTKGNSFATRIGNIFVIGQGKKPWVSL 240
Query: 239 PKGKGIKLSIIEEARKR 255
P+G GI +++E+ +++
Sbjct: 241 PEGDGIYETVMEQRQRK 257
>gi|323508791|dbj|BAJ77289.1| cgd7_4760 [Cryptosporidium parvum]
gi|323510165|dbj|BAJ77976.1| cgd7_4760 [Cryptosporidium parvum]
Length = 261
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/251 (57%), Positives = 183/251 (72%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ AP +WMLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY E
Sbjct: 1 MARGPKKHLKRVAAPSNWMLDKLTGVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I+MQR + VDGKVRTD +P G MDVVSI + +N R++YDTKGRF + +EA
Sbjct: 61 AKYIVMQRLIKVDGKVRTDICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAG 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV V G KGIP T D RT+RY P +KANDT+K+DL K+ DF+K +VGN+
Sbjct: 121 FKLCKVTKVALGAKGIPTATTNDARTLRYIHPDVKANDTVKVDLATGKVIDFVKCEVGNM 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTGGR++GRVG I + E+ G+ + I+D G FAT + N+F IG+ KP V+LPK
Sbjct: 181 CMVTGGRSQGRVGTITHFERKMGAQCIVTIRDQKGATFATLMKNIFVIGEEGKPLVTLPK 240
Query: 241 GKGIKLSIIEE 251
KGI+LS +E+
Sbjct: 241 DKGIRLSNVED 251
>gi|340505756|gb|EGR32063.1| hypothetical protein IMG5_097290 [Ichthyophthirius multifiliis]
Length = 260
Score = 296 bits (757), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 141/257 (54%), Positives = 189/257 (73%), Gaps = 2/257 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKR+ APK WM+ KLGG + +PS GPHK RE LPL ++L+NRL YAL R+
Sbjct: 1 MVRGPKKHLKRICAPKSWMVSKLGGIWVTRPSQGPHKLRESLPLFVLLKNRLNYALNGRD 60
Query: 61 VIAIL--MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE 118
V IL +++V VDGK R D+ +P G MDVV+IPKT+ENFR+LYDTKGRF L +L +E
Sbjct: 61 VTLILNDKEQNVFVDGKCRRDRGFPTGLMDVVNIPKTDENFRVLYDTKGRFVLKTLNKQE 120
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
A+FKL KV+ G +PYI T+D RTIR+P+P IK DTIK DL +NKI + + G
Sbjct: 121 AQFKLLKVKGKAIGPNQVPYIVTHDSRTIRFPNPNIKIGDTIKYDLVKNKILEHTHLESG 180
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
NI V G N GRVG+I + EKH GSF+ +H++D+ G+ FATR+GN+F IG+G KPW+SL
Sbjct: 181 NICFVQNGNNIGRVGLITHIEKHPGSFDIVHVKDSKGNSFATRIGNIFVIGQGKKPWISL 240
Query: 239 PKGKGIKLSIIEEARKR 255
P+G+GI +++E+ +++
Sbjct: 241 PEGEGIYETVMEQRQRK 257
>gi|126654348|ref|XP_001388411.1| ribosomal protein S4 [Cryptosporidium parvum Iowa II]
gi|126117504|gb|EAZ51604.1| ribosomal protein S4, putative [Cryptosporidium parvum Iowa II]
Length = 260
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/250 (57%), Positives = 182/250 (72%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+ AP +WMLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY E
Sbjct: 1 ARGPKKHLKRVAAPSNWMLDKLTGVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTEA 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+MQR + VDGKVRTD +P G MDVVSI + +N R++YDTKGRF + +EA F
Sbjct: 61 KYIVMQRLIKVDGKVRTDICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGF 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KLCKV V G KGIP T D RT+RY P +KANDT+K+DL K+ DF+K +VGN+
Sbjct: 121 KLCKVTKVALGAKGIPTATTNDARTLRYIHPDVKANDTVKVDLATGKVIDFVKCEVGNMC 180
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGGR++GRVG I + E+ G+ + I+D G FAT + N+F IG+ KP V+LPK
Sbjct: 181 MVTGGRSQGRVGTITHFERKMGAQCIVTIRDQKGATFATLMKNIFVIGEEGKPLVTLPKD 240
Query: 242 KGIKLSIIEE 251
KGI+LS +E+
Sbjct: 241 KGIRLSNVED 250
>gi|281206604|gb|EFA80790.1| 40S ribosomal protein S4 [Polysphondylium pallidum PN500]
Length = 284
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/250 (58%), Positives = 184/250 (73%), Gaps = 7/250 (2%)
Query: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR 68
LK L +P K+ AP+PS GP K +ECLPL ++LRNRLKYALT EV I+MQR
Sbjct: 30 LKTLFSPFRSSYQKM----APRPSPGPRKLKECLPLCIILRNRLKYALTRNEVTKIVMQR 85
Query: 69 HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRS 128
V ++G VRTD +P GFMDVVSI KTNENFRLL+DTKGRF+L ++ EAKF L KV
Sbjct: 86 LVKINGVVRTDVNFPVGFMDVVSIEKTNENFRLLFDTKGRFQLQRIQPNEAKFILTKVTK 145
Query: 129 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRN 188
V+ G +GIPY++T +G T RYPDP IK +DT+K+DLE +KI F+ F++ N+ M+TGG N
Sbjct: 146 VETGLQGIPYLHTDNGHTYRYPDPAIKIHDTVKIDLETSKIVSFVPFELNNLCMITGGHN 205
Query: 189 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 248
GRVG+I NRE+H GSF+ +H+ D++GH FATRL NVF IGKGS +VSL GKG+K S+
Sbjct: 206 LGRVGVITNRERHLGSFDIVHVTDSVGHSFATRLSNVFIIGKGSTTFVSLLAGKGVKKSL 265
Query: 249 IEEARKRQAA 258
I+E R AA
Sbjct: 266 IDE---RNAA 272
>gi|265141272|gb|ACY74439.1| 40S ribosomal protein S4-like protein [Carukia barnesi]
Length = 227
Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 176/224 (78%)
Query: 39 RECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNEN 98
RECLPLI+ LRNRLKYAL EV IL QR + VDGKVRTD TYPAGFMDVV+I KT +N
Sbjct: 1 RECLPLIIFLRNRLKYALNGDEVKKILKQRLIKVDGKVRTDPTYPAGFMDVVTIEKTGDN 60
Query: 99 FRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND 158
FRLLYD KGRF H + EEA +KL KV+ G + +PY+ T+DGRTIRYPDPL+K ND
Sbjct: 61 FRLLYDVKGRFVCHRITPEEAVYKLGKVKRTGVGIRSVPYLVTHDGRTIRYPDPLVKVND 120
Query: 159 TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEF 218
T+ +D+ KITDFIKFD GN VMV GGRN GR+GII +RE+H GS++ +HI+DA+G++F
Sbjct: 121 TVIIDIRTGKITDFIKFDTGNAVMVIGGRNTGRIGIITHRERHPGSYDIVHIKDAVGNQF 180
Query: 219 ATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
ATRLGN+F IG+G+K +++P+GKGI+LSI EE +R A ++ +
Sbjct: 181 ATRLGNIFIIGRGTKGMITVPRGKGIRLSIAEERDRRLAEKSKS 224
>gi|82539137|ref|XP_723981.1| ribosomal protein S4 X isoform [Plasmodium yoelii yoelii 17XNL]
gi|23478464|gb|EAA15546.1| ribosomal protein S4 X isoform [Plasmodium yoelii yoelii]
Length = 253
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/251 (54%), Positives = 185/251 (73%)
Query: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR 68
+KR+NAP HWML+K+ G +APK SSGPHK E +PL+++LRNRLKYALT+ EV IL+Q+
Sbjct: 1 MKRVNAPSHWMLNKMDGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQK 60
Query: 69 HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRS 128
V VD K RTD T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+KLCK++
Sbjct: 61 IVKVDNKTRTDCTFPVGLMDVIHITKSNEFFRLLYDVKGRFVPHRITNEESKYKLCKIKK 120
Query: 129 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRN 188
+ + + T+DGR+I Y P +K NDTI+LDLE K+ + +KF VGN+VMVT G +
Sbjct: 121 IILRKGKLSIAITHDGRSIPYIHPEVKVNDTIRLDLESGKVLEHLKFQVGNMVMVTAGHS 180
Query: 189 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 248
GRVG I + +K+ G+++ IH++D+ G FATRL N+F IG +KP++SLP+ KGIKL I
Sbjct: 181 VGRVGTILSIDKNIGTYDIIHVKDSRGKVFATRLSNIFVIGDNTKPYISLPREKGIKLDI 240
Query: 249 IEEARKRQAAQ 259
IEE R R AQ
Sbjct: 241 IEERRNRLKAQ 251
>gi|2500489|sp|P55832.1|RS4_HORSE RecName: Full=40S ribosomal protein S4
gi|4432936|dbj|BAA21075.1| ribosomal protein S4 [Macaca fuscata]
gi|4432938|dbj|BAA21077.1| ribosomal protein S4 [Felis catus]
gi|4432940|dbj|BAA21079.1| ribosomal protein S4 [Canis lupus familiaris]
gi|4432941|dbj|BAA21080.1| ribosomal protein S4 [Equus caballus]
gi|4432942|dbj|BAA21081.1| ribosomal protein S4 [Sus scrofa]
Length = 194
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/194 (70%), Positives = 160/194 (82%)
Query: 20 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 79
LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD
Sbjct: 1 LDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 60
Query: 80 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 139
TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++
Sbjct: 61 ITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL 120
Query: 140 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 199
T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE
Sbjct: 121 VTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRE 180
Query: 200 KHKGSFETIHIQDA 213
+H GSF+ +H++DA
Sbjct: 181 RHPGSFDVVHVKDA 194
>gi|340546083|gb|AEK51840.1| X-linked ribosomal protein S4 [Heteronotia binoei]
Length = 193
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/193 (69%), Positives = 159/193 (82%)
Query: 16 KHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGK 75
KHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGK
Sbjct: 1 KHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 60
Query: 76 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKG 135
VRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KG
Sbjct: 61 VRTDITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKG 120
Query: 136 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 195
IP++ T+D RTIRYPDPLIK NDTI+++LE KITDFIKFD GN+ MVTGG N GR+G+I
Sbjct: 121 IPHLVTHDARTIRYPDPLIKVNDTIQIELETGKITDFIKFDTGNLCMVTGGANLGRIGVI 180
Query: 196 KNREKHKGSFETI 208
NRE+H GSF+ +
Sbjct: 181 TNRERHPGSFDVV 193
>gi|118573853|sp|P0C233.1|RS4_TETTH RecName: Full=40S ribosomal protein S4; AltName: Full=40S ribosomal
protein S7
gi|1096035|prf||2110340A ribosomal protein S7
Length = 259
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/256 (55%), Positives = 186/256 (72%), Gaps = 2/256 (0%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKR+NAPK WML+KLGG +A +PS GPHK RE LPL ++L+ RL YAL R+V
Sbjct: 1 ARGPKKHLKRINAPKSWMLNKLGGIWATRPSQGPHKLRESLPLSVLLKERLNYALNGRDV 60
Query: 62 IAILMQR--HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
IL + +V VD KVR DK YP G MDVV I KT+++FR+LYDTKGRF L SL EEA
Sbjct: 61 TLILNDKEGNVFVDQKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
K+KL KV + G IPYI T+D RTIR+P+P IK DT+K DL NKI +F + GN
Sbjct: 121 KYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGN 180
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
+ + G N GRVGII++ EKH+GSF+ H++DA G+ FATRLGN+F +G+G K ++ LP
Sbjct: 181 VCYIQQGNNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKLYIELP 240
Query: 240 KGKGIKLSIIEEARKR 255
G G++ +I+EE +++
Sbjct: 241 SGDGVRETILEERKRK 256
>gi|330038406|ref|XP_003239588.1| 40S ribosomal protein S4 [Cryptomonas paramecium]
gi|327206512|gb|AEA38690.1| 40S ribosomal protein S4 [Cryptomonas paramecium]
Length = 242
Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 138/240 (57%), Positives = 177/240 (73%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA GLKKHLKRL APK W L KL G FAPK SGPHK PL L+LRN+LKYA+ RE
Sbjct: 1 MAHGLKKHLKRLKAPKKWALSKLDGIFAPKIKSGPHKKENSYPLSLILRNKLKYAVNTRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VI IL Q+ + VDGKVRT K YP G MD++SI KT E FRLLYD+ G F LH + E+
Sbjct: 61 VIQILSQKMIYVDGKVRTQKNYPVGIMDIISIKKTKEIFRLLYDSIGSFTLHRIGKNESS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
K+CKV SV+ G GIPYI T+DGRTIRYPDP+IK+ND++ ++ + KI DFIKFD+G++
Sbjct: 121 IKICKVISVKIGNMGIPYIVTHDGRTIRYPDPVIKSNDSVIFNIFKKKIIDFIKFDIGSL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+VTGG N G+VGII +EK+ + E I++++ ++F T++ NVF IGKG+K ++SLPK
Sbjct: 181 CIVTGGYNTGKVGIIYYKEKYYNNQEMIYLKNFEENQFFTKISNVFIIGKGNKSFISLPK 240
>gi|4432939|dbj|BAA21078.1| ribosomal protein S4 [Bos taurus]
Length = 194
Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/194 (69%), Positives = 159/194 (81%)
Query: 20 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 79
LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD
Sbjct: 1 LDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 60
Query: 80 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 139
TYPAGFMDV+SI K ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++
Sbjct: 61 VTYPAGFMDVISIDKIGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL 120
Query: 140 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 199
T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE
Sbjct: 121 VTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRE 180
Query: 200 KHKGSFETIHIQDA 213
+H GSF+ +H++DA
Sbjct: 181 RHPGSFDVVHVKDA 194
>gi|145528524|ref|XP_001450056.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417656|emb|CAK82659.1| unnamed protein product [Paramecium tetraurelia]
Length = 816
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/258 (53%), Positives = 186/258 (72%), Gaps = 2/258 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH+KR+ APK WML KLGG + +PS GPHK RE +PL ++L+ +LKYAL RE
Sbjct: 551 MARGPKKHMKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQQKLKYALYARE 610
Query: 61 VIAILMQR--HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE 118
V IL + ++ VDGKVR+D YP G DV++I KT E++R+LYD +G+F L S++ +E
Sbjct: 611 VQMILADKDGNIKVDGKVRSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDE 670
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
AKFKL KV + G +PYI T D RTIRYP+P I NDT+K+DLE KI DFIK + G
Sbjct: 671 AKFKLVKVTQKKVGPNNVPYIVTNDSRTIRYPNPEIHVNDTLKIDLETGKIVDFIKEEPG 730
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
NI + GG N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SL
Sbjct: 731 NICYIIGGNNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISL 790
Query: 239 PKGKGIKLSIIEEARKRQ 256
P G+ L+ +E+ + R+
Sbjct: 791 PDDNGLYLTALEKKQARE 808
>gi|432089928|gb|ELK23579.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 210
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/244 (58%), Positives = 171/244 (70%), Gaps = 35/244 (14%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEA
Sbjct: 61 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEA------------------- 101
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
K NDTI+ DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 102 ----------------KVNDTIQTDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 145
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 146 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 205
Query: 259 QAAA 262
+ ++
Sbjct: 206 KQSS 209
>gi|260950591|ref|XP_002619592.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
gi|238847164|gb|EEQ36628.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
Length = 224
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 162/200 (81%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + EE +KL KV+ + G+K IPY
Sbjct: 61 DSTYPAGFMDVITLEATNENFRLVYDIKGRFTVHRITAEEGSYKLGKVKKIALGKKAIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+DGRTIRYPDP I+ANDT+K+DL KITDFIKFD G +VMVTGG+N GRVG+I +R
Sbjct: 121 VVTHDGRTIRYPDPAIRANDTVKIDLATGKITDFIKFDTGRLVMVTGGKNLGRVGVIVHR 180
Query: 199 EKHKGSFETIHIQDALGHEF 218
EKH+G F+ +HI+DAL + F
Sbjct: 181 EKHEGGFDLVHIKDALDNTF 200
>gi|402697610|gb|AFQ90991.1| X-linked ribosomal protein S4, partial [Malaclemys terrapin]
Length = 193
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/193 (69%), Positives = 158/193 (81%)
Query: 16 KHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGK 75
KHWMLDKL G FAP+PS+GPHK RE LPLI+ LRNRLKYALT EV I MQR + +DGK
Sbjct: 1 KHWMLDKLTGVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 60
Query: 76 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKG 135
VRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KG
Sbjct: 61 VRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKG 120
Query: 136 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 195
IP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I
Sbjct: 121 IPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVI 180
Query: 196 KNREKHKGSFETI 208
NRE+H GSF+ +
Sbjct: 181 TNRERHPGSFDVV 193
>gi|356565689|ref|XP_003551070.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4-like
[Glycine max]
Length = 230
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 149/159 (93%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
+ VSIPKTNEN RLLYDTKGRFRLHS+RD+EAKFKLCKVRSV FG KGIPY+NTYDGRTI
Sbjct: 14 EAVSIPKTNENIRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVXFGPKGIPYLNTYDGRTI 73
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
YPDPLI+ANDT+KLDLE+ +++ FIKFDVGN+VMVTGGRNRG VG+IKNREKHKGSF+T
Sbjct: 74 HYPDPLIRANDTVKLDLEKTRLSIFIKFDVGNVVMVTGGRNRGCVGVIKNREKHKGSFKT 133
Query: 208 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKL 246
IH+QDA GHEFA+R+GNVFTIGKG+KPW+SL KGKGIKL
Sbjct: 134 IHVQDATGHEFASRMGNVFTIGKGTKPWISLAKGKGIKL 172
>gi|403356345|gb|EJY77764.1| 40S ribosomal protein S4 [Oxytricha trifallax]
Length = 264
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 188/262 (71%), Gaps = 2/262 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH KR+ AP HWML+KLGG +A + +GPHK RE +PL ++LRNRL+YA++ +E
Sbjct: 1 MARGPKKHQKRIAAPSHWMLNKLGGVYATRAGTGPHKRRESMPLSVLLRNRLRYAISRQE 60
Query: 61 VIAILMQRHVLV--DGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE 118
I I+ + L+ DGK+R D +P G MDVV+I +T E+FR+LYD KGR++ H + +E
Sbjct: 61 AIKIVKDKEGLIKIDGKIRRDPRFPLGIMDVVTIDRTGEHFRILYDVKGRYQAHKIDAKE 120
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
A+FKLC +R G +PY+ T+DGRT+R+P P IK +DT+KL+LE N++ IKF+ G
Sbjct: 121 AQFKLCSIRRKAMGPNKVPYVITHDGRTLRFPHPDIKKHDTVKLNLETNEVESLIKFENG 180
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
V++ GG N GRVG++++ EKH SF+ HI+DA GH FATR+ NVF IG+G K +SL
Sbjct: 181 AQVLLVGGNNIGRVGVLQHIEKHPSSFDIAHIKDAAGHSFATRVNNVFVIGEGKKSVISL 240
Query: 239 PKGKGIKLSIIEEARKRQAAQA 260
KGIKLS+I+E KR +A
Sbjct: 241 LPAKGIKLSLIDERNKRLRIEA 262
>gi|431891055|gb|ELK01933.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 452
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 137/239 (57%), Positives = 171/239 (71%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G KKHL+ + APK WMLDKL G F P S+ PHK R LPLI+ RNRLKYA T E
Sbjct: 1 MACGPKKHLECIAAPKPWMLDKLTGVFPPCSSTSPHKLRGYLPLIIFSRNRLKYAKTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I +Q+ + +D KV TD TYPAGFMDV+SI KT EN L+YD +G F +H + E+AK
Sbjct: 61 VKKICIQQFIKIDSKVWTDVTYPAGFMDVISIDKTRENLCLIYDIRGHFPIHQITPEKAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCK+R KGIP++ +D T+ YPDPLIK N TI++DL+ KITDFIKFD GN+
Sbjct: 121 YKLCKMRKTFVSTKGIPHLVIHDACTMCYPDPLIKVNGTIRIDLQTGKITDFIKFDTGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
MVT G N GR+G+I NRE H GSF+ ++++DA G FATRL N+ IGK +KPW+SLP
Sbjct: 181 CMVTVGDNLGRIGVITNRESHSGSFDVVNVKDANGDSFATRLSNICIIGKDNKPWLSLP 239
>gi|413944948|gb|AFW77597.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 271
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 158/209 (75%), Gaps = 34/209 (16%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWML+KLG AFAPKPSSGPHKSRECLPLIL++RNRLKYALTYRE
Sbjct: 89 ARGLKKHLKRLNAPKHWMLNKLGRAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE- 147
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
M S+ +T T G FRLH +RDE+AKF
Sbjct: 148 -------------------------MSFPSLRQTR--------TIGCFRLHPIRDEDAKF 174
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
LCKV SVQFGQKGIPY+NTY RTIRYPDPLIKANDT K+DLE NKI DFIKFDVGN+V
Sbjct: 175 MLCKVGSVQFGQKGIPYLNTYGDRTIRYPDPLIKANDTNKIDLETNKIMDFIKFDVGNVV 234
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHI 210
MVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 235 MVTGGRNTGRVGVIKNREKHKGNFETIHV 263
>gi|402697604|gb|AFQ90987.1| X-linked ribosomal protein S4, partial [Cyrtodactylus sp. JJF-2012]
Length = 193
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/193 (69%), Positives = 158/193 (81%)
Query: 16 KHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGK 75
KHWMLDKL G FAP+PS+GPHK RE LPLI+ LRNRLKYALT EV I MQR + +DGK
Sbjct: 1 KHWMLDKLTGVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 60
Query: 76 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKG 135
VRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KG
Sbjct: 61 VRTDITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKG 120
Query: 136 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 195
IP++ T+D RTIRYPDPLIK NDTI+++LE KITDFIKFD GN+ MVTGG N GR+G+I
Sbjct: 121 IPHLVTHDARTIRYPDPLIKVNDTIQIELETGKITDFIKFDTGNLCMVTGGANLGRIGVI 180
Query: 196 KNREKHKGSFETI 208
NRE+H GSF+ +
Sbjct: 181 TNRERHPGSFDVV 193
>gi|402697606|gb|AFQ90988.1| X-linked ribosomal protein S4, partial [Draco beccarii]
Length = 193
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/193 (69%), Positives = 158/193 (81%)
Query: 16 KHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGK 75
KHWMLDKL G FAP+PS+GPHK RE LPLI+ LRNRLKYALT EV I MQR + +DGK
Sbjct: 1 KHWMLDKLTGVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 60
Query: 76 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKG 135
VRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KG
Sbjct: 61 VRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKG 120
Query: 136 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 195
IP++ T+D RTIRYPDPLIK NDTI++DLE KIT+FIKFD GN+ MVTGG N GR+G+I
Sbjct: 121 IPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVI 180
Query: 196 KNREKHKGSFETI 208
NRE+H GSF+ +
Sbjct: 181 TNRERHPGSFDVV 193
>gi|145499397|ref|XP_001435684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402818|emb|CAK68287.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/263 (50%), Positives = 188/263 (71%), Gaps = 2/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH+KR+ APK WML KLGG + +PS GPHK RE +PL ++L+++LKYAL RE
Sbjct: 24 MARGPKKHMKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYARE 83
Query: 61 VIAILMQR--HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE 118
V IL + ++ VDGKVR+D YP G DV++I KT E++R+LYD +G+F L S++ +E
Sbjct: 84 VQTILADKDGNIKVDGKVRSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDE 143
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
AKFKL KV + G +PYI T D RTIRYP+P I NDT+K+DLE K+ DF+K + G
Sbjct: 144 AKFKLVKVTQKKVGPNNVPYIVTSDARTIRYPNPDIHVNDTLKIDLETGKVVDFLKEEPG 203
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
N+ + GG N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SL
Sbjct: 204 NLCYIIGGNNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISL 263
Query: 239 PKGKGIKLSIIEEARKRQAAQAA 261
P G+ L+ +E+ + R+ +
Sbjct: 264 PDDNGLYLTALEKKQAREHQEET 286
>gi|118376768|ref|XP_001021565.1| Ribosomal family S4e containing protein [Tetrahymena thermophila]
gi|89303332|gb|EAS01320.1| Ribosomal family S4e containing protein [Tetrahymena thermophila
SB210]
Length = 370
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/288 (51%), Positives = 190/288 (65%), Gaps = 32/288 (11%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAF-----------------------------APKPS 32
ARG KKHLKR+NAPK WML+KLGG + A +PS
Sbjct: 83 ARGPKKHLKRINAPKSWMLNKLGGIWVITFFAFRLRKNDFITTIPKLKFIYFKKQATRPS 142
Query: 33 SGPHKSRECLPLILVLRNRLKYALTYREVIAIL--MQRHVLVDGKVRTDKTYPAGFMDVV 90
GPHK RE LPL ++L+ RL YAL R+V IL +++V VDGKVR DK YP G MDVV
Sbjct: 143 QGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVV 202
Query: 91 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 150
I KT+++FR+LYDTKGRF L SL EEAK+KL KV + G IPYI T+D RTIR+P
Sbjct: 203 RIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFP 262
Query: 151 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
+P IK DT+K DL NKI +F + GN+ + G N GRVGII++ EKH+GSF+ H+
Sbjct: 263 NPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSFDICHV 322
Query: 211 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 258
+DA G+ FATRLGN+F +G+G K W+ LP G G++ +I+EE RKR+ +
Sbjct: 323 KDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEE-RKRKFS 369
>gi|145475847|ref|XP_001423946.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391008|emb|CAK56548.1| unnamed protein product [Paramecium tetraurelia]
Length = 292
Score = 282 bits (722), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 136/259 (52%), Positives = 186/259 (71%), Gaps = 5/259 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH+KR+ APK WML KLGG + +PS GPHK RE +PL ++L+++LKYAL RE
Sbjct: 28 MARGPKKHMKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYARE 87
Query: 61 VIAILMQR--HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE 118
IL + ++ VDGKVRTD YP G DV++I KT E++R+LYD +G+F L S++ EE
Sbjct: 88 STMILADKDGNIKVDGKVRTDSGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPEE 147
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
AKFKL KV + G +PYI T D RTIRYP+P I NDT+K+DLE K+ +F+K + G
Sbjct: 148 AKFKLVKVTQKKVGPNNVPYIVTNDARTIRYPNPDIHVNDTLKIDLESGKVVEFLKEEPG 207
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
N+ + GG N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SL
Sbjct: 208 NLCYIIGGNNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISL 267
Query: 239 PKGKGIKLSIIEEARKRQA 257
P G+ L+ +E K+QA
Sbjct: 268 PDDNGLYLTALE---KKQA 283
>gi|145488765|ref|XP_001430386.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397483|emb|CAK62988.1| unnamed protein product [Paramecium tetraurelia]
Length = 290
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/263 (50%), Positives = 186/263 (70%), Gaps = 2/263 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH+KR+ APK WML KLGG + +PS GPHK RE +PL ++L+++LKYAL RE
Sbjct: 26 MARGPKKHMKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYARE 85
Query: 61 VIAILMQR--HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE 118
IL + ++ VDGKVRTD YP G DV++I KT E++R+LYD +G+F L S++ EE
Sbjct: 86 STMILADKDGNIKVDGKVRTDSGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPEE 145
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
AKFKL KV + G +PYI T D RTIRYP+P I NDT+K+DLE K+ +F+K + G
Sbjct: 146 AKFKLVKVTQKKVGPNNVPYIVTNDARTIRYPNPDIHVNDTLKIDLESGKVVEFLKEEPG 205
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
N+ + GG N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SL
Sbjct: 206 NLCYIIGGNNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISL 265
Query: 239 PKGKGIKLSIIEEARKRQAAQAA 261
P G+ L+ +E+ + + +
Sbjct: 266 PDDNGLYLTALEKKQAKDHQEVG 288
>gi|402909065|ref|XP_003917249.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Papio
anubis]
Length = 246
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 169/233 (72%), Gaps = 1/233 (0%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
ML+KL G FAP+PS+ PHK RECLPLI+ LRN+LKYALT EV I MQ + +DG VR
Sbjct: 1 MLNKLTGVFAPRPSTDPHKLRECLPLIVFLRNKLKYALTGDEVKNIRMQCFIKIDGTVRV 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
TYPAGFMDV+ I KT E+F L+YDTKG F ++ + EEAK+ LCK R G KGIPY
Sbjct: 61 ATTYPAGFMDVIGIEKTGEHFCLVYDTKGCFAVYRIPVEEAKYNLCKGRKSTVGMKGIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ ++D TI YPDPLIK N +K+DL KI +FIKF GN+ MV GG + RVG+ NR
Sbjct: 121 LVSHDTGTIHYPDPLIKVNHAVKIDLGTGKIINFIKFHTGNVCMVIGGASLSRVGVTTNR 180
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 251
++H GS +H++DA G+ FATRL N+F IG GSKPW+SLP+ KGI+L+I EE
Sbjct: 181 QRHPGSLN-VHVRDASGNSFATRLSNIFVIGNGSKPWISLPRRKGIRLTIAEE 232
>gi|281182957|ref|NP_001162261.1| 40S ribosomal protein S4, X isoform [Papio anubis]
gi|159487313|gb|ABW97203.1| ribosomal protein S4, X-linked (predicted) [Papio anubis]
Length = 198
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 160/197 (81%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCK
Sbjct: 1 MQRFIKIDGKVRTDITYPAGFMDVMSIDKTGENFRLIYDTKGRFAVHCITPEEAKYKLCK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
VR + KG+P++ T+D TIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTG
Sbjct: 61 VRKIFVSTKGVPHLVTHDAHTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 120
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SLP+GKGI+
Sbjct: 121 GANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVTGKGNKPWISLPRGKGIR 180
Query: 246 LSIIEEARKRQAAQAAA 262
L+I EE KR AA+ ++
Sbjct: 181 LTIAEERDKRLAAKQSS 197
>gi|162606302|ref|XP_001713181.1| 40S ribosomal protein S4 [Guillardia theta]
gi|4583659|emb|CAB40397.1| 40S ribosomal protein S4 [Guillardia theta]
Length = 257
Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 130/245 (53%), Positives = 179/245 (73%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M+RG+KKH KRLNAPK W+L+KLGG +AP+ SSGPHK + +PL++V+RN+LKY+ RE
Sbjct: 1 MSRGIKKHYKRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ IL + + VDGKVR DK +PAG MDV+SI T EN+R+LYD G F LH + +E+
Sbjct: 61 SLNILKKNEIYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESM 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV V G KGIPYI T+DGRTIR+P+ LIK+ND+I LDL NK+ DFIKF +G++
Sbjct: 121 FKLCKVIRVSIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+V G N GR+G+ N +GS + ++D G F+T+ N+F IGKG+K ++SLP+
Sbjct: 181 CVVIKGSNIGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPR 240
Query: 241 GKGIK 245
+G++
Sbjct: 241 FRGLR 245
>gi|323332828|gb|EGA74232.1| Rps4ap [Saccharomyces cerevisiae AWRI796]
Length = 203
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/182 (71%), Positives = 151/182 (82%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AIL
Sbjct: 22 KKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIL 81
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 82 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 141
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTG
Sbjct: 142 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 201
Query: 186 GR 187
GR
Sbjct: 202 GR 203
>gi|76803657|gb|ABA55738.1| 40S ribosomal protein S4 [Mytilus edulis]
Length = 204
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 129/200 (64%), Positives = 161/200 (80%)
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
EV I+ QR + VDGKVRTD T+PAGFMDVV+I KT ENFRLLYD KGRF +H ++ EEA
Sbjct: 5 EVKKIVHQRLIKVDGKVRTDMTFPAGFMDVVTIDKTQENFRLLYDVKGRFAVHRIKSEEA 64
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
K+KLC+V+ V KG+ Y+ T+DGRTIRYPDPL+K NDTI +D+ KI DFIKFD GN
Sbjct: 65 KYKLCRVKKVGVALKGVCYVVTHDGRTIRYPDPLVKVNDTIMVDIATGKIKDFIKFDSGN 124
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
+ M+TGG N GRVG+I++RE+H GSF+ +HI+D+LGH FATRL VF IGKG+KP+VSLP
Sbjct: 125 LCMITGGHNLGRVGVIQHRERHPGSFDIVHIKDSLGHSFATRLSYVFIIGKGNKPYVSLP 184
Query: 240 KGKGIKLSIIEEARKRQAAQ 259
+GKG+KLSI EE +R AA+
Sbjct: 185 RGKGVKLSIAEERDRRMAAK 204
>gi|145495133|ref|XP_001433560.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400678|emb|CAK66163.1| unnamed protein product [Paramecium tetraurelia]
Length = 258
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 131/250 (52%), Positives = 181/250 (72%), Gaps = 2/250 (0%)
Query: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR 68
+KR+ APK WML KLGG + +PS GPHK RE +PL ++L+ +LKYAL REV IL +
Sbjct: 1 MKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQQKLKYALYAREVQMILADK 60
Query: 69 --HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+V VDGKVR+D YP G +DV++I KT E++R+LYD +G+F L S++ +EAKFKL KV
Sbjct: 61 DGNVKVDGKVRSDFGYPVGLLDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKV 120
Query: 127 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGG 186
+ G +PYI T D RTIRYP+P I NDT+K+DLE K+ DFIK + GNI + GG
Sbjct: 121 TQKKVGPNNVPYIVTNDARTIRYPNPEIHINDTLKIDLETGKVVDFIKEEPGNICYIVGG 180
Query: 187 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKL 246
N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG KP +SLP G+ L
Sbjct: 181 NNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKPLISLPDDNGLYL 240
Query: 247 SIIEEARKRQ 256
+ +E+ + R+
Sbjct: 241 TALEKKQARE 250
>gi|397518940|ref|XP_003829632.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Pan paniscus]
Length = 270
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 142/253 (56%), Positives = 172/253 (67%), Gaps = 2/253 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G KKHLKR+ PKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT +
Sbjct: 1 MAWGPKKHLKRVAVPKHWMLDKLKGIFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDD 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ + +DGKVR TYPAGF DV+ I KT E+F L+ D KG + + EEAK
Sbjct: 61 VKEIRMQCFIKIDGKVRVAITYPAGFTDVIGI-KTGEHFCLVCDXKGCSAVDRVTVEEAK 119
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+ LCKVR V G KGI + T+D TI YPDP+IK N+T++ DL KI +F KF GN
Sbjct: 120 YNLCKVRKVTMGMKGIQRLVTHDTGTIHYPDPVIKVNNTVQTDLGTGKIINFSKFHTGNA 179
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG + VG+ NRE H GS H++DA G+ FA RL N+F GSKPW+SLP+
Sbjct: 180 CMVIGGASLRHVGVT-NREGHPGSLNVGHVRDANGNSFALRLSNIFVTANGSKPWISLPR 238
Query: 241 GKGIKLSIIEEAR 253
GKG +L+ E R
Sbjct: 239 GKGTRLAEKREKR 251
>gi|70909483|emb|CAJ17166.1| ribosomal protein S4e [Curculio glandium]
Length = 188
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/188 (68%), Positives = 153/188 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG F P+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFTPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR + VDGK+RTD YPAGFMDVV+I KT E FRL+YD KG +H + EEAK
Sbjct: 61 VTKIVMQRLIKVDGKIRTDPNYPAGFMDVVTIEKTGEFFRLIYDDKGTVSIHRITAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR VQ G KG+P++ T+DG+TIRYPDP+IK NDTI+L++ +KI DFIKF+ GN+
Sbjct: 121 YKLCKVRKVQTGPKGVPFLVTHDGKTIRYPDPMIKVNDTIQLEIATSKILDFIKFESGNL 180
Query: 181 VMVTGGRN 188
M+TGGRN
Sbjct: 181 CMITGGRN 188
>gi|207344483|gb|EDZ71609.1| YHR203Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323308725|gb|EGA61964.1| Rps4bp [Saccharomyces cerevisiae FostersO]
gi|323333218|gb|EGA74617.1| Rps4bp [Saccharomyces cerevisiae AWRI796]
gi|323336905|gb|EGA78163.1| Rps4ap [Saccharomyces cerevisiae Vin13]
gi|323337382|gb|EGA78635.1| Rps4bp [Saccharomyces cerevisiae Vin13]
gi|323347847|gb|EGA82109.1| Rps4ap [Saccharomyces cerevisiae Lalvin QA23]
gi|323348218|gb|EGA82468.1| Rps4bp [Saccharomyces cerevisiae Lalvin QA23]
gi|323354726|gb|EGA86561.1| Rps4bp [Saccharomyces cerevisiae VL3]
gi|365764787|gb|EHN06308.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765294|gb|EHN06806.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 196
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 156/195 (80%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 246 LSIIEEARKRQAAQA 260
LSI EE +R+A Q
Sbjct: 181 LSIAEERDRRRAQQG 195
>gi|365759818|gb|EHN01586.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365760266|gb|EHN01998.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401837629|gb|EJT41534.1| RPS4B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 196
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 156/195 (80%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V+ VQ G+KG+PY+ T+DGRT+RYPDP IK NDT+K+DL KITDFIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTLRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 246 LSIIEEARKRQAAQA 260
LSI EE +R+A Q
Sbjct: 181 LSIAEERDRRRAQQG 195
>gi|156843178|ref|XP_001644658.1| hypothetical protein Kpol_526p53 [Vanderwaltozyma polyspora DSM
70294]
gi|156115305|gb|EDO16800.1| hypothetical protein Kpol_526p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 196
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 155/195 (79%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITD+IKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPSIKVNDTVKIDLATGKITDYIKFDAGKLVYVTG 120
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
GRN GR+G I ++E+H G F+ +HI+D L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDTLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 246 LSIIEEARKRQAAQA 260
L+I EE +R+A Q
Sbjct: 181 LTIAEERDRRRAQQG 195
>gi|123376214|ref|XP_001297934.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|123468788|ref|XP_001317610.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|154417078|ref|XP_001581560.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|154420837|ref|XP_001583433.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121878306|gb|EAX85004.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121900348|gb|EAY05387.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121915788|gb|EAY20574.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121917674|gb|EAY22447.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 255
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 174/250 (69%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M R + HLKRL AP HW+L K G FA PS+GPHK RECLP+ + LR+RLKYALT +E
Sbjct: 1 MPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+AI+ +R V VDGKVRT+ YP G MDV+ + K+NE FR++YD KGRF +H + +EA
Sbjct: 61 AVAIVKRRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL +V + G KGIP++ T+DGRTI Y DP ++ +D +K +++ ++ IKF VG++
Sbjct: 121 FKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVT G N GRVG I+ EK SF+ +H++D G FATR+ NVF IG+ P +SLP
Sbjct: 181 AMVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPA 240
Query: 241 GKGIKLSIIE 250
+G++ SI+E
Sbjct: 241 REGVRPSILE 250
>gi|145500014|ref|XP_001435991.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403128|emb|CAK68594.1| unnamed protein product [Paramecium tetraurelia]
Length = 258
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/255 (50%), Positives = 182/255 (71%), Gaps = 2/255 (0%)
Query: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR 68
+KR+ APK WML KLGG + +PS GPHK RE +PL ++L+++LKYAL REV IL +
Sbjct: 1 MKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYAREVQMILADK 60
Query: 69 --HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
++ VDGKVR+D YP G DV++I KT E++R+LYD +G+F L S++ +EAKFKL KV
Sbjct: 61 DGNIKVDGKVRSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKV 120
Query: 127 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGG 186
+ G +PYI T DGRTIRYP+P I NDT+K++LE KI DF+K + GN+ + GG
Sbjct: 121 TQKKVGPNNVPYIVTNDGRTIRYPNPEIHVNDTLKIELETGKIVDFLKEEPGNLCYIIGG 180
Query: 187 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKL 246
N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L
Sbjct: 181 NNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYL 240
Query: 247 SIIEEARKRQAAQAA 261
+ +E+ + R+ +
Sbjct: 241 TALEKKQAREHQEET 255
>gi|123439290|ref|XP_001310418.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121892187|gb|EAX97488.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 255
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 174/250 (69%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M R + HLKRL AP HW+L K G FA PS+GPHK RECLP+ + LR+RLKYALT +E
Sbjct: 1 MPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+AI+ +R V VDGKVRT+ YP G MDV+ + K+NE FR++YD KGRF +H + +EA
Sbjct: 61 AVAIVKRRLVKVDGKVRTNYRYPTGLMDVIGLGKSNELFRIIYDCKGRFCVHHIEAKEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL +V + G KGIP++ T+DGRTI Y DP ++ +D +K +++ ++ IKF VG++
Sbjct: 121 FKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDV 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVT G N GRVG I+ EK SF+ +H++D G FATR+ NVF IG+ P +SLP
Sbjct: 181 AMVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPA 240
Query: 241 GKGIKLSIIE 250
+G++ SI+E
Sbjct: 241 REGVRPSILE 250
>gi|123477532|ref|XP_001321933.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121904769|gb|EAY09710.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 269
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 174/250 (69%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M R + HLKRL AP HW+L K G FA PS+GPHK RECLP+ + LR+RLKYALT +E
Sbjct: 15 MPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKE 74
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+AI+ +R V VDGKVRT+ YP G MDV+ + K+NE FR++YD KGRF +H + +EA
Sbjct: 75 AVAIVKRRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEAS 134
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL +V + G KGIP++ T+DGRTI Y DP ++ +D +K +++ ++ IKF VG++
Sbjct: 135 FKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDV 194
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVT G N GRVG I+ EK SF+ +H++D G FATR+ NVF IG+ P +SLP
Sbjct: 195 AMVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPA 254
Query: 241 GKGIKLSIIE 250
+G++ SI+E
Sbjct: 255 REGVRPSILE 264
>gi|323304309|gb|EGA58083.1| Rps4ap [Saccharomyces cerevisiae FostersB]
Length = 196
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 155/195 (79%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQRHV VDGKVRTD T PAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTXPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 246 LSIIEEARKRQAAQA 260
LSI EE +R+A Q
Sbjct: 181 LSIAEERDRRRAQQG 195
>gi|388506280|gb|AFK41206.1| unknown [Lotus japonicus]
Length = 141
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 127/134 (94%), Positives = 133/134 (99%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRH+LVDGKVRTDKTYP+GFMDVVSIPKTNENFRLLYD KGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHILVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDIKGRFRLHSVRDDEAK 120
Query: 121 FKLCKVRSVQFGQK 134
FKLCKVRSVQFGQ+
Sbjct: 121 FKLCKVRSVQFGQR 134
>gi|148700270|gb|EDL32217.1| mCG6316 [Mus musculus]
Length = 180
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 147/180 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGK+RT YPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKEICMQRFIKIDGKIRTGIIYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D TIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDALTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
>gi|71755051|ref|XP_828440.1| 40s ribosomal protein S4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|71755053|ref|XP_828441.1| 40S ribosomal protein S4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802195|pdb|3ZEY|1 Chain 1, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70833826|gb|EAN79328.1| 40s ribosomal protein S4, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|70833827|gb|EAN79329.1| 40S ribosomal protein S4, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 273
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 139/263 (52%), Positives = 175/263 (66%), Gaps = 8/263 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK RECL L++++RNRLKYAL E IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNALEAQMIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VDGK R D YPAGFMDVV IPKT + FR+LYD KGRF L + + E+ K+ K
Sbjct: 63 RQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFALVRVSEAESSIKMMK 122
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V +V G IP T+DG IRYPDP DT+ D++E K+ D IK G +VMVTG
Sbjct: 123 VVNVYTGTGRIPVAVTHDGHRIRYPDPRTSRGDTLVYDVKEKKVLDLIKIGNGKVVMVTG 182
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGI 244
G NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK S V+LPK +G+
Sbjct: 183 GANRGRIGEIVSIERHPGAFDIARLKDASGHEFATRATNIFVIGKDMSSVPVTLPKQQGL 242
Query: 245 KLSIIEE-------ARKRQAAQA 260
++++I+E A R+ QA
Sbjct: 243 RINVIQEREEKLIAAETRRTTQA 265
>gi|444722371|gb|ELW63068.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 618
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 158/203 (77%)
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
EV I QR + +DGKVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H + +EA
Sbjct: 113 EVKKICTQRFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEA 172
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
K+KLCKVR + G KGIP++ T+D RTIRY DPLIK NDTI++DLE K +DFIKFD GN
Sbjct: 173 KYKLCKVRKIFLGTKGIPHLVTHDARTIRYLDPLIKVNDTIQIDLETGKSSDFIKFDTGN 232
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
+ MV GG + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KP +SLP
Sbjct: 233 LCMVAGGASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPGISLP 292
Query: 240 KGKGIKLSIIEEARKRQAAQAAA 262
+GKGI+L+I +E KR AA+ +
Sbjct: 293 RGKGIRLTIAKERDKRPAAKQST 315
>gi|261334297|emb|CBH17291.1| 40S ribosomal protein S4, putative [Trypanosoma brucei gambiense
DAL972]
gi|261334298|emb|CBH17292.1| 40S ribosomal protein S4, putative [Trypanosoma brucei gambiense
DAL972]
Length = 273
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/263 (52%), Positives = 174/263 (66%), Gaps = 8/263 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK RECL L++++RNRLKYAL E IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNALEAQMIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VDGK R D YPAGFMDVV IPKT + FR+LYD KGRF L + + E+ K+ K
Sbjct: 63 RQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFALVRVSEAESSIKMMK 122
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V +V G IP T+DG IRYPDP DT+ D++E K+ D IK G +VMVTG
Sbjct: 123 VVNVYTGTGRIPVAVTHDGHRIRYPDPRTSRGDTLVYDVKEKKVLDLIKIGNGKVVMVTG 182
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGI 244
G NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IG S V+LPK +G+
Sbjct: 183 GANRGRIGEIVSIERHPGAFDIARLKDASGHEFATRATNIFVIGNDMSSVPVTLPKQQGL 242
Query: 245 KLSIIEE-------ARKRQAAQA 260
++++I+E A R+ QA
Sbjct: 243 RINVIQEREEKLIAAETRRTTQA 265
>gi|390331682|ref|XP_001192878.2| PREDICTED: 40S ribosomal protein S4-like [Strongylocentrotus
purpuratus]
Length = 253
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 167/259 (64%), Gaps = 47/259 (18%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARG KKHLKRLNAPKHWML KL G FAP+ S+GPHK RECLPLI+ LRNRLKYALTY E
Sbjct: 42 ARGPKKHLKRLNAPKHWMLAKLTGNFAPRASTGPHKLRECLPLIIFLRNRLKYALTYVET 101
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+MQR + VDGKVRTD TYPAGFMDV+SI KT ENFRL+Y+ KGRF +H + EEAK
Sbjct: 102 KKIMMQRLIKVDGKVRTDITYPAGFMDVISINKTGENFRLIYNVKGRFVVHRIGSEEAKV 161
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
+ P +K G++
Sbjct: 162 RFVI-------------------------HPRLK----------------------GHLC 174
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M+TGGRN GRVG I +REKH GSFE +HI+DA H +ATRLGNVF IGK +K +VSLPKG
Sbjct: 175 MITGGRNLGRVGTITHREKHPGSFEIVHIKDASDHTYATRLGNVFVIGKANKAYVSLPKG 234
Query: 242 KGIKLSIIEEARKRQAAQA 260
KGI+L+I EE KR A +
Sbjct: 235 KGIRLTIAEEREKRIAQRV 253
>gi|340058530|emb|CCC52888.1| putative 40S ribosomal protein S4 [Trypanosoma vivax Y486]
Length = 273
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/259 (52%), Positives = 178/259 (68%), Gaps = 2/259 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+KKHLKRL APK WML KL G FAP+P +GPHK RECL LI+++RNRLKYAL RE I
Sbjct: 2 VKKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLIIIIRNRLKYALNAREAQMI 61
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q V VDGK R D YPAGFMDVV IP+T + FR+LYD KGRF L + + EA K+
Sbjct: 62 LRQGFVHVDGKPRKDGKYPAGFMDVVEIPETGDRFRILYDVKGRFALVRISEAEAGIKML 121
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
KV +V G +P T+DG IRYPDP + DT+ D+++ K D I+ G +V+VT
Sbjct: 122 KVINVYTGTGRVPVAVTHDGHRIRYPDPRTRRGDTLVYDVKKKKAVDLIRTGKGRVVLVT 181
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKG 243
GG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK K ++LPK +G
Sbjct: 182 GGANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRATNIFVIGKDMKSIPITLPKQQG 241
Query: 244 IKLSIIEEARKRQAAQAAA 262
+++++I+E R+ + +A A
Sbjct: 242 LRINVIQE-REEKLIEAEA 259
>gi|340058531|emb|CCC52889.1| putative 40S ribosomal protein S4 [Trypanosoma vivax Y486]
Length = 273
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/259 (52%), Positives = 178/259 (68%), Gaps = 2/259 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+KKHLKRL APK WML KL G FAP+P +GPHK RECL LI+++RNRLKYAL RE I
Sbjct: 2 VKKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLIIIIRNRLKYALNAREAQMI 61
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q V VDGK R D YPAGFMDVV IP+T + FR+LYD KGRF L + + EA K+
Sbjct: 62 LRQGFVHVDGKPRKDGKYPAGFMDVVEIPETGDRFRILYDVKGRFALVRISEAEAGIKML 121
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
KV +V G +P T+DG IRYPDP + DT+ D+++ K D I+ G +V+VT
Sbjct: 122 KVINVYTGTGRVPVAVTHDGHRIRYPDPRTRRGDTLVYDVKKKKAVDLIRTGNGRVVLVT 181
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKG 243
GG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK K ++LPK +G
Sbjct: 182 GGANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRATNIFVIGKDMKSIPITLPKQQG 241
Query: 244 IKLSIIEEARKRQAAQAAA 262
+++++I+E R+ + +A A
Sbjct: 242 LRINVIQE-REEKLIEAEA 259
>gi|217071784|gb|ACJ84252.1| unknown [Medicago truncatula]
Length = 196
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 123/136 (90%), Positives = 132/136 (97%)
Query: 124 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
+VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMV
Sbjct: 56 ARVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNVVMV 115
Query: 184 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 243
TGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGN FTIGKG+KPWVSLPKGKG
Sbjct: 116 TGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNAFTIGKGTKPWVSLPKGKG 175
Query: 244 IKLSIIEEARKRQAAQ 259
IKL++IEEARKRQAAQ
Sbjct: 176 IKLTVIEEARKRQAAQ 191
>gi|342185473|emb|CCC94956.1| putative 40S ribosomal protein S4 [Trypanosoma congolense IL3000]
Length = 273
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 137/254 (53%), Positives = 170/254 (66%), Gaps = 1/254 (0%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK RECL L++++RNRLKYAL E IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNAHEAQMIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VDGK R D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA K+ K
Sbjct: 63 RQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKMMK 122
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V +V G IP T+DG IRYPDP DT+ D++ K+TD IK G +VMVTG
Sbjct: 123 VVNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMVTG 182
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGI 244
G NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK S V+LPK G+
Sbjct: 183 GANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQLGL 242
Query: 245 KLSIIEEARKRQAA 258
+ ++I E ++ A
Sbjct: 243 RKNVIVEREEKLIA 256
>gi|431917973|gb|ELK17202.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 258
Score = 266 bits (679), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 138/262 (52%), Positives = 168/262 (64%), Gaps = 36/262 (13%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLK + APKHWMLDKL G FAP PS HK +E LPLI+ LRN LKYALT E
Sbjct: 32 MARGPKKHLKWVAAPKHWMLDKLTGVFAPHPSISSHKLKESLPLIIFLRNSLKYALTGDE 91
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DG+V+TD TYPAGFMDV+SI K EN+ LL DTKG F + + EEAK
Sbjct: 92 VKKICMQRFIKIDGQVQTDVTYPAGFMDVISIDKIRENYCLLCDTKGHFTVREITTEEAK 151
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
KLCK+ DLE KITDFIKFD GN+
Sbjct: 152 HKLCKI------------------------------------DLETGKITDFIKFDTGNL 175
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVTG N GR+G+I NRE+H GS + +H++DA G+ FATRL N+F IGKG+ +SLP
Sbjct: 176 CMVTGSANLGRIGVITNRERHPGSCDVVHVKDANGNSFATRLSNIFVIGKGNNQGISLPC 235
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI L+I ++ KR AA+ ++
Sbjct: 236 GKGIHLTIAKDRDKRLAAKQSS 257
>gi|71415246|ref|XP_809696.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|71415254|ref|XP_809700.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|71653417|ref|XP_815346.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|2981290|gb|AAC38966.1| ribosomal protein S4 homolog [Trypanosoma cruzi]
gi|2981292|gb|AAC38967.1| ribosomal protein S4 homolog [Trypanosoma cruzi]
gi|70874118|gb|EAN87845.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|70874122|gb|EAN87849.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|70880395|gb|EAN93495.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|83375600|gb|ABC17643.1| ribosomal protein S4 copy 1 [Trypanosoma cruzi]
gi|83375601|gb|ABC17644.1| ribosomal protein S4 copy 2 [Trypanosoma cruzi]
gi|83375604|gb|ABC17646.1| ribosomal protein S4 copy 3 [Trypanosoma cruzi]
gi|205278880|gb|ACI02315.1| ribosomal protein S4-like protein [Trypanosoma cruzi]
gi|407852324|gb|EKG05879.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
Length = 273
Score = 266 bits (679), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 133/257 (51%), Positives = 171/257 (66%), Gaps = 1/257 (0%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK REC+ L++++RNRLKYAL E IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECMTLMIIIRNRLKYALNAAEAQMIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VDGK R D YP GFMDVV IP+T + FR+LYD KGRF L + + E KL K
Sbjct: 63 RQGLVCVDGKPRKDTKYPVGFMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEGNIKLLK 122
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V +V IP T+DG IRYPDP DT+ +L+E K+ D IK G +VMVTG
Sbjct: 123 VENVYTSTGRIPVAMTHDGHRIRYPDPRTHRGDTLVYNLKEKKVVDLIKSSNGKVVMVTG 182
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGI 244
G NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK + V+LPK +G+
Sbjct: 183 GANRGRIGEIMSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMQSVPVTLPKQQGL 242
Query: 245 KLSIIEEARKRQAAQAA 261
++++I+E ++ A A
Sbjct: 243 RINVIQEREEKLIAAEA 259
>gi|343473038|emb|CCD14963.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 307
Score = 266 bits (679), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 137/254 (53%), Positives = 170/254 (66%), Gaps = 1/254 (0%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK RECL L++++RNRLKYAL E IL
Sbjct: 37 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNAHEAQMIL 96
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VDGK R D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA K+ K
Sbjct: 97 RQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKMMK 156
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V +V G IP T+DG IRYPDP DT+ D++ K+TD IK G +VMVTG
Sbjct: 157 VVNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMVTG 216
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGI 244
G NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK S V+LPK G+
Sbjct: 217 GANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQLGL 276
Query: 245 KLSIIEEARKRQAA 258
+ ++I E ++ A
Sbjct: 277 RKNVIVEREEKLIA 290
>gi|407412707|gb|EKF34479.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi marinkellei]
Length = 273
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/257 (51%), Positives = 171/257 (66%), Gaps = 1/257 (0%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK REC+ L++++RNRLKYAL E IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECMTLMIIIRNRLKYALNAAEAQMIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VDGK R D YP GFMDVV IP+T + FR+LYD KGRF L + + E KL K
Sbjct: 63 RQGLVCVDGKPRKDTKYPVGFMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEGNIKLLK 122
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V +V IP T+DG IRYPDP DT+ +L+E K+ D IK G +VMVTG
Sbjct: 123 VVNVYTSTGRIPVAMTHDGHRIRYPDPRTHRGDTLVYNLKEKKVVDLIKSSNGKVVMVTG 182
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGI 244
G NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK + V+LPK +G+
Sbjct: 183 GANRGRIGEIMSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMQSVPVTLPKQQGL 242
Query: 245 KLSIIEEARKRQAAQAA 261
++++I+E ++ A A
Sbjct: 243 RINVIQEREEKLIAAEA 259
>gi|307213994|gb|EFN89201.1| 40S ribosomal protein S4 [Harpegnathos saltator]
Length = 198
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 152/197 (77%)
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
+MQR + VDGKVRTD YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+KLC
Sbjct: 1 MMQRLIKVDGKVRTDSNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLC 60
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
KV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ KI D I+FD GN+ M+T
Sbjct: 61 KVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATGKILDSIRFDSGNLCMIT 120
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGI 244
GRN GRVG + NRE+H GSF+ H++DA GH FATRL NVF IGKG+K +VSLP+ KG+
Sbjct: 121 SGRNLGRVGTVVNRERHPGSFDICHVKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGV 180
Query: 245 KLSIIEEARKRQAAQAA 261
KLSI EE +R AA+
Sbjct: 181 KLSIAEERDRRLAAKGV 197
>gi|119623175|gb|EAX02770.1| ribosomal protein S4, Y-linked 1, isoform CRA_a [Homo sapiens]
Length = 179
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 124/179 (69%), Positives = 145/179 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD G
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGQ 179
>gi|189484049|gb|ACE00318.1| ribosomal protein S4 [Caenorhabditis brenneri]
Length = 212
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 158/211 (74%)
Query: 49 RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 108
RNRLKYAL Y E IL QR V VDGKVRT +P GFMDVV+I +TNE FR+LYDTKGR
Sbjct: 1 RNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGR 60
Query: 109 FRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENK 168
+ +H ++ EA FKLCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ K
Sbjct: 61 YVVHRIQAAEADFKLCKVKSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQK 120
Query: 169 ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 228
ITDF+KF+ GN+ VTGGRN GRVGII +RE+ G+F+ IHI+DA GH FATR+ NVF I
Sbjct: 121 ITDFVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGAFDIIHIKDAAGHSFATRISNVFVI 180
Query: 229 GKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 259
GKG+K VSLP G G++L+I EE KR A +
Sbjct: 181 GKGNKALVSLPSGGGVRLTIAEERDKRMAQK 211
>gi|355703406|gb|EHH29897.1| hypothetical protein EGK_10441, partial [Macaca mulatta]
Length = 245
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/240 (55%), Positives = 169/240 (70%), Gaps = 6/240 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
+A G K+HLKR+ A +HWMLDKL G FA +PS+GPHK RECLP I LRNRLKYALT E
Sbjct: 12 VAFGPKQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPHIF-LRNRLKYALTGDE 70
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ + VDGK+RTD P MDV+SI K E+F L+Y RF LH + EE K
Sbjct: 71 VKKICMQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVK 130
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCK+R + KGIP++ +D T+R+PD LIK NDTI++DLE KIT +KFD GN+
Sbjct: 131 YKLCKMRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKITA-LKFDTGNL 189
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+VTGG N GR+G+I NRE+H SF+T H++DA + F+ +F I KG+KPW+SLP+
Sbjct: 190 CLVTGGANWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLPR 245
>gi|414587746|tpg|DAA38317.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 193
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 130/184 (70%), Positives = 148/184 (80%), Gaps = 19/184 (10%)
Query: 27 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 86
+APKPSSGPHKSRECLPLIL++RNRLKYALTY EVI+ILMQ +VLVDGK+
Sbjct: 21 WAPKPSSGPHKSRECLPLILIIRNRLKYALTYLEVISILMQHYVLVDGKM---------- 70
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 146
S P + T G FRLH +RDE+AKFKLCKVRS+QFGQKGIPY+NTY+ T
Sbjct: 71 ----SFPSLRQ-----MRTTGFFRLHPIRDEDAKFKLCKVRSIQFGQKGIPYLNTYNDCT 121
Query: 147 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 206
IRYPD LIKANDTIK++LE NKI DFIKFDVGN+VMVTGGRN GRVG+IKN+EKHKGSFE
Sbjct: 122 IRYPDLLIKANDTIKIELETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNKEKHKGSFE 181
Query: 207 TIHI 210
TIH+
Sbjct: 182 TIHV 185
>gi|60418888|gb|AAX19871.1| putative ribosomal protein S4, partial [Doryanthes excelsa]
Length = 131
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/131 (93%), Positives = 130/131 (99%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWML+KLGGAFAPKPSSGPHK+RECLPLIL+LRN+LKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLNKLGGAFAPKPSSGPHKARECLPLILILRNKLKYALTYRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
VIAILMQRHV+VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61 VIAILMQRHVMVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 FKLCKVRSVQF 131
FKLCKVR+VQF
Sbjct: 121 FKLCKVRNVQF 131
>gi|154333974|ref|XP_001563242.1| putative 40S ribosomal protein S4 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060254|emb|CAM45663.1| putative 40S ribosomal protein S4 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 273
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/257 (52%), Positives = 170/257 (66%), Gaps = 1/257 (0%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VD R D YPAGFMDV+ IPKT + FRLLYD KGRF L S+ + EA+ KL K
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVIEIPKTGDRFRLLYDVKGRFALVSVSEAEAQIKLMK 122
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V ++ +P T+DG IRYPDP DTI ++ E K D IK G V+VTG
Sbjct: 123 VVNLYTATGRVPVAVTHDGHRIRYPDPHCSIGDTIVYNVNEKKCVDLIKNRQGKAVIVTG 182
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGI 244
G NRGR+G I E+H G+F+ H++DA G EFATR N+F IGK + V++PK +G+
Sbjct: 183 GANRGRIGEIVKVERHPGAFDIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGL 242
Query: 245 KLSIIEEARKRQAAQAA 261
++++I+E +R A A
Sbjct: 243 RMNVIQEREERLIAAEA 259
>gi|195548072|gb|ACG49261.1| 40S ribosomal protein S4 [Anopheles stephensi]
Length = 187
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 148/187 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQRHV +DGKVRTD YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRHVKIDGKVRTDPNYPAGFMDVINIHKTGEYFRLIYDVKGRFTVHRITSEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV+ VQ G K +PY+ T+DGRTIRYPDP I +D+I+ D+ KI D +KF+ GN+
Sbjct: 121 YKLLKVKRVQIGPKRVPYLLTHDGRTIRYPDPAIHQHDSIQYDIATGKILDVLKFEPGNL 180
Query: 181 VMVTGGR 187
M+TGGR
Sbjct: 181 YMITGGR 187
>gi|109124282|ref|XP_001109776.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Macaca
mulatta]
Length = 244
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/239 (55%), Positives = 168/239 (70%), Gaps = 6/239 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
+A G K+HLKR+ A +HWMLDKL G FA +PS+GPHK RECLP I LRNRLKYALT E
Sbjct: 12 VAFGPKQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPHIF-LRNRLKYALTGDE 70
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQ + VDGK+RTD P MDV+SI K E+F L+Y RF LH + EE K
Sbjct: 71 VKKICMQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVK 130
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCK+R + KGIP++ +D T+R+PD LIK NDTI++DLE KIT +KFD GN+
Sbjct: 131 YKLCKMRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKITA-LKFDTGNL 189
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
+VTGG N GR+G+I NRE+H SF+T H++DA + F+ +F I KG+KPW+SLP
Sbjct: 190 CLVTGGGNWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>gi|146080976|ref|XP_001464142.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|134068232|emb|CAM66518.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
Length = 480
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/257 (52%), Positives = 169/257 (65%), Gaps = 1/257 (0%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL
Sbjct: 210 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 269
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L SL + EA+ KL K
Sbjct: 270 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVSLSEAEAQIKLMK 329
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V ++ +P T+DG IRYPDP DTI +++E K D IK G V+VTG
Sbjct: 330 VVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTG 389
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGI 244
G NRGR+G I E H G+F H++DA G EFATR N+F IGK + V++PK +G+
Sbjct: 390 GANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNHLQVTVPKQQGL 449
Query: 245 KLSIIEEARKRQAAQAA 261
++++I+E +R A A
Sbjct: 450 RMNVIQEREERLIAAEA 466
>gi|146080974|ref|XP_001464141.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|398012258|ref|XP_003859323.1| 40S ribosomal protein S4, putative [Leishmania donovani]
gi|134068231|emb|CAM66517.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|322497537|emb|CBZ32611.1| 40S ribosomal protein S4, putative [Leishmania donovani]
Length = 273
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/257 (52%), Positives = 169/257 (65%), Gaps = 1/257 (0%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L SL + EA+ KL K
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVSLSEAEAQIKLMK 122
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V ++ +P T+DG IRYPDP DTI +++E K D IK G V+VTG
Sbjct: 123 VVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTG 182
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGI 244
G NRGR+G I E H G+F H++DA G EFATR N+F IGK + V++PK +G+
Sbjct: 183 GANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNHLQVTVPKQQGL 242
Query: 245 KLSIIEEARKRQAAQAA 261
++++I+E +R A A
Sbjct: 243 RMNVIQEREERLIAAEA 259
>gi|401417661|ref|XP_003873323.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489552|emb|CBZ24810.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 430
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/261 (52%), Positives = 171/261 (65%), Gaps = 1/261 (0%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
A+ KKHLKRL APK WML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE
Sbjct: 156 AKMAKKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREG 215
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL Q V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L +L + EA+
Sbjct: 216 EMILRQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQI 275
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KL KV ++ +P T+DG IRYPDP DTI +++E K D IK G V
Sbjct: 276 KLMKVVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAV 335
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPK 240
+VTGG NRGR+G I E H G+F H++DA G EFATR N+F IGK + V++PK
Sbjct: 336 IVTGGANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPK 395
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
+G+++++I+E +R A A
Sbjct: 396 QQGLRMNVIQEREERLIAAEA 416
>gi|401417663|ref|XP_003873324.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489553|emb|CBZ24811.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 273
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 135/257 (52%), Positives = 169/257 (65%), Gaps = 1/257 (0%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L +L + EA+ KL K
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMK 122
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V ++ +P T+DG IRYPDP DTI +++E K D IK G V+VTG
Sbjct: 123 VVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTG 182
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGI 244
G NRGR+G I E H G+F H++DA G EFATR N+F IGK + V++PK +G+
Sbjct: 183 GANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGL 242
Query: 245 KLSIIEEARKRQAAQAA 261
++++I+E +R A A
Sbjct: 243 RMNVIQEREERLIAAEA 259
>gi|157866320|ref|XP_001681866.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|157866322|ref|XP_001681867.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|11066280|gb|AAG28535.1|AF199018_1 40S ribosomal protein S4 [Leishmania major]
gi|68125165|emb|CAJ03041.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|68125166|emb|CAJ03044.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
Length = 273
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 135/257 (52%), Positives = 169/257 (65%), Gaps = 1/257 (0%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Q V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L +L + EA+ KL K
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMK 122
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V ++ +P T+DG IRYPDP DTI +++E K D IK G V+VTG
Sbjct: 123 VVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTG 182
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGI 244
G NRGR+G I E H G+F H++DA G EFATR N+F IGK + V++PK +G+
Sbjct: 183 GANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGL 242
Query: 245 KLSIIEEARKRQAAQAA 261
++++I+E +R A A
Sbjct: 243 RMNVIQEREERLIAAEA 259
>gi|413948238|gb|AFW80887.1| hypothetical protein ZEAMMB73_153699 [Zea mays]
Length = 377
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/183 (71%), Positives = 144/183 (78%), Gaps = 19/183 (10%)
Query: 28 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 87
APKPSSGPHKSRECLPLIL++RNRLKYA TYREVI+ILMQ HVLVDGK M
Sbjct: 206 APKPSSGPHKSRECLPLILIIRNRLKYAPTYREVISILMQHHVLVDGK-----------M 254
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
S+ +T T G FRLH +RDE+AKFKL KVRSVQFGQK IPY+NTYD RTI
Sbjct: 255 SFPSLRQTR--------TTGCFRLHPIRDEDAKFKLYKVRSVQFGQKDIPYLNTYDDRTI 306
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
RYPDPLIKANDTIK+DLE NKI DFI FDVGN+VMV G RN GRVG+IK REKHKG+FET
Sbjct: 307 RYPDPLIKANDTIKIDLETNKIMDFIMFDVGNVVMVIGRRNTGRVGVIKIREKHKGNFET 366
Query: 208 IHI 210
IH+
Sbjct: 367 IHV 369
>gi|344244607|gb|EGW00711.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 187
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/183 (67%), Positives = 144/183 (78%), Gaps = 4/183 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMDV+SI KT + FRL+YDTKG F +H + EEAK+K CKVR + G KGIPY
Sbjct: 61 DITYPAGFMDVISIDKTGQKFRLIYDTKGHFAVHRITPEEAKYKWCKVRKIFVGTKGIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ ++D RTIRYPDPLIK NDTI++DLE T IKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVSHDARTIRYPDPLIKVNDTIQIDLE----TGAIKFDTGNLCMVTGGANLGRIGVITNR 176
Query: 199 EKH 201
E+H
Sbjct: 177 ERH 179
>gi|223646542|gb|ACN10029.1| 40S ribosomal protein S4 [Salmo salar]
gi|223672389|gb|ACN12376.1| 40S ribosomal protein S4 [Salmo salar]
Length = 213
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 147/183 (80%)
Query: 80 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 139
K PAGFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ G KG+P++
Sbjct: 30 KVVPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPHL 89
Query: 140 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 199
T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTGG N GR+GII NRE
Sbjct: 90 VTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRE 149
Query: 200 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 259
+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE KR AA+
Sbjct: 150 RHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAAK 209
Query: 260 AAA 262
A +
Sbjct: 210 AGS 212
>gi|183233913|ref|XP_001913934.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|169801348|gb|EDS89291.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449701849|gb|EMD42590.1| 40S ribosomal protein S4 [Entamoeba histolytica KU27]
Length = 197
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/190 (63%), Positives = 141/190 (74%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AKFKLCK+ G IPY
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPY 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
I T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN M+ GG GRVG+I R
Sbjct: 121 IVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKR 180
Query: 199 EKHKGSFETI 208
E H GSFE I
Sbjct: 181 EVHPGSFEII 190
>gi|326918854|ref|XP_003205701.1| PREDICTED: 40S ribosomal protein S4-like [Meleagris gallopavo]
Length = 182
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 144/175 (82%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
DV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 7 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 66
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 67 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 126
Query: 208 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 127 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 181
>gi|47197900|emb|CAF89133.1| unnamed protein product [Tetraodon nigroviridis]
Length = 176
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 142/175 (81%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
DV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP++ T+D RTI
Sbjct: 1 DVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTI 60
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
RYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 61 RYPDPLIKVNDTVRIDLESGKITDFIKFDTGNMCMVTGGANLGRIGVITNRERHPGSFDV 120
Query: 208 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
+H++D G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA+ A+
Sbjct: 121 VHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQAS 175
>gi|302505080|ref|XP_003014761.1| hypothetical protein ARB_07322 [Arthroderma benhamiae CBS 112371]
gi|302664454|ref|XP_003023857.1| hypothetical protein TRV_02053 [Trichophyton verrucosum HKI 0517]
gi|291178067|gb|EFE33858.1| hypothetical protein ARB_07322 [Arthroderma benhamiae CBS 112371]
gi|291187875|gb|EFE43239.1| hypothetical protein TRV_02053 [Trichophyton verrucosum HKI 0517]
gi|307752099|gb|ADN93070.1| putative 40S ribosomal subunit protein S4 [Arthroderma benhamiae]
Length = 215
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 153/213 (71%), Gaps = 22/213 (10%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL K
Sbjct: 1 MQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 60
Query: 126 VRSVQFGQKGIPYINTYDGRT---------------------IRYPDPLIKANDTIKLDL 164
V+ VQ G+ GIP++ T+D RT IRYPDP I+ NDT+K+D+
Sbjct: 61 VKRVQLGKGGIPFLVTHDARTRWTKVWFDSRRAWSERRWQLNIRYPDPSIRVNDTVKIDI 120
Query: 165 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGN 224
KITDF+KFD G I M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR N
Sbjct: 121 ATGKITDFVKFDTGVIAMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESN 180
Query: 225 VFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 257
VF IG+ KPWVSLPKGKG+KL+I EE +R+A
Sbjct: 181 VFVIGQ-EKPWVSLPKGKGVKLTIAEERDRRRA 212
>gi|320097679|gb|ADW09574.1| putative 40S ribosomal protein S4-like protein [Schiedea
stellarioides]
Length = 132
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/132 (87%), Positives = 126/132 (95%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+ KI DF+KFDVGN+
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGS+PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGSRPWVSLPK 120
Query: 241 GKGIKLSIIEEA 252
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|300121745|emb|CBK22320.2| unnamed protein product [Blastocystis hominis]
gi|300124038|emb|CBK25309.2| unnamed protein product [Blastocystis hominis]
gi|300175830|emb|CBK21826.2| unnamed protein product [Blastocystis hominis]
Length = 194
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 149/191 (78%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQR V VDGK+RTD T+PAGFMDVV++ +++ FRLLYD KGRF LH + + EA++KLCK
Sbjct: 1 MQRLVKVDGKIRTDSTFPAGFMDVVTLEGSSDRFRLLYDVKGRFVLHRIDENEAQYKLCK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V Q K IP+I T+D RTIR+PDP +K NDT+K+DL+ NK+ +KF+VGN+ +T
Sbjct: 61 VVKRQLSSKKIPFIVTHDARTIRFPDPTVKVNDTVKVDLKTNKVIGHVKFEVGNLCFITK 120
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
G N GRVG+I +R++H GSF+ +H++DA GHEFATRL NVF IG+G++P VSLPKG G+K
Sbjct: 121 GHNIGRVGVIVHRDRHFGSFDIVHVRDAAGHEFATRLSNVFIIGEGNQPMVSLPKGNGVK 180
Query: 246 LSIIEEARKRQ 256
LSIIEE R+
Sbjct: 181 LSIIEEKEMRE 191
>gi|320097677|gb|ADW09573.1| putative 40S ribosomal protein S4-like protein [Schiedea
stellarioides]
Length = 132
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/132 (87%), Positives = 126/132 (95%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+ KI DF+KFDVGN+
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGS+PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDATGHEFATRQGNVFIVGKGSRPWVSLPK 120
Query: 241 GKGIKLSIIEEA 252
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|302172089|gb|ADK97882.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172095|gb|ADK97885.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172097|gb|ADK97886.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172099|gb|ADK97887.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172101|gb|ADK97888.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172103|gb|ADK97889.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172111|gb|ADK97893.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172113|gb|ADK97894.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172115|gb|ADK97895.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172121|gb|ADK97898.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097681|gb|ADW09575.1| putative 40S ribosomal protein S4-like protein [Schiedea adamantis]
gi|320097683|gb|ADW09576.1| putative 40S ribosomal protein S4-like protein [Schiedea adamantis]
gi|320097685|gb|ADW09577.1| putative 40S ribosomal protein S4-like protein [Schiedea
membranacea]
gi|320097687|gb|ADW09578.1| putative 40S ribosomal protein S4-like protein [Schiedea
membranacea]
gi|320097689|gb|ADW09579.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097693|gb|ADW09581.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097697|gb|ADW09583.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097701|gb|ADW09585.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097705|gb|ADW09587.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097707|gb|ADW09588.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097717|gb|ADW09593.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097719|gb|ADW09594.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097721|gb|ADW09595.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097723|gb|ADW09596.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097725|gb|ADW09597.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097727|gb|ADW09598.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097729|gb|ADW09599.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097731|gb|ADW09600.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097733|gb|ADW09601.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097735|gb|ADW09602.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097737|gb|ADW09603.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097739|gb|ADW09604.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097741|gb|ADW09605.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097743|gb|ADW09606.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097745|gb|ADW09607.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097747|gb|ADW09608.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097749|gb|ADW09609.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097751|gb|ADW09610.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097753|gb|ADW09611.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097757|gb|ADW09613.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097761|gb|ADW09615.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097781|gb|ADW09625.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
Length = 132
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 114/132 (86%), Positives = 126/132 (95%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+ KI DF+KFDVGN+
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 241 GKGIKLSIIEEA 252
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|47196669|emb|CAF89132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 175
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 141/174 (81%)
Query: 89 VVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIR 148
V+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP++ T+D RTIR
Sbjct: 1 VISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTIR 60
Query: 149 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 208
YPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +
Sbjct: 61 YPDPLIKVNDTVRIDLESGKITDFIKFDTGNMCMVTGGANLGRIGVITNRERHPGSFDVV 120
Query: 209 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
H++D G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA+ A+
Sbjct: 121 HVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQAS 174
>gi|166952347|gb|ABZ04256.1| ribosomal protein rps4 [Lineus viridis]
Length = 153
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 127/153 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKHLKRLNAPKHWMLDKL G FAPKPS GPHK RECLPL + LRNRLKYALTY E
Sbjct: 1 MPRGPKKHLKRLNAPKHWMLDKLSGVFAPKPSCGPHKMRECLPLTIFLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ I+MQR + VDGKVRTDK YPAGFMDVVSI KTNENFRL+YD KGRF +H + EEAK
Sbjct: 61 CVKIVMQRLIKVDGKVRTDKNYPAGFMDVVSIEKTNENFRLIYDVKGRFAIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 153
+KLCKV+ + KG+PY+ T+DGRTIRYPDPL
Sbjct: 121 YKLCKVKKLGVAAKGVPYVVTHDGRTIRYPDPL 153
>gi|302172081|gb|ADK97878.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172083|gb|ADK97879.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172085|gb|ADK97880.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172087|gb|ADK97881.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172105|gb|ADK97890.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172107|gb|ADK97891.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172109|gb|ADK97892.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172127|gb|ADK97901.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172129|gb|ADK97902.1| 40S ribosomal protein S4-like protein [Schiedea adamantis]
Length = 132
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/132 (86%), Positives = 125/132 (94%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L KI DF+KFDVGN+
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLXTQKIEDFVKFDVGNV 60
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 241 GKGIKLSIIEEA 252
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|302172091|gb|ADK97883.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172093|gb|ADK97884.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172117|gb|ADK97896.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172119|gb|ADK97897.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172123|gb|ADK97899.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172125|gb|ADK97900.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097691|gb|ADW09580.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097695|gb|ADW09582.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097699|gb|ADW09584.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097703|gb|ADW09586.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097709|gb|ADW09589.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097711|gb|ADW09590.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097713|gb|ADW09591.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097715|gb|ADW09592.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097755|gb|ADW09612.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097759|gb|ADW09614.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097763|gb|ADW09616.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097765|gb|ADW09617.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097767|gb|ADW09618.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097769|gb|ADW09619.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097771|gb|ADW09620.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097773|gb|ADW09621.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097775|gb|ADW09622.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097777|gb|ADW09623.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097779|gb|ADW09624.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097783|gb|ADW09626.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
Length = 132
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/132 (86%), Positives = 125/132 (94%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L KI DF+KFDVGN+
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLYTQKIEDFVKFDVGNV 60
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 241 GKGIKLSIIEEA 252
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|444515837|gb|ELV10992.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 376
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 135/161 (83%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 173 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 232
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 233 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 292
Query: 208 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 248
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I
Sbjct: 293 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 333
>gi|170574390|ref|XP_001892793.1| 40S ribosomal protein S4 [Brugia malayi]
gi|158601467|gb|EDP38373.1| 40S ribosomal protein S4, putative [Brugia malayi]
Length = 201
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 147/200 (73%), Gaps = 1/200 (0%)
Query: 64 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 123
I QR + VDGKVRTD +PAGFMDV+ I KTNE FRLLYD KGR+ H + ++E KL
Sbjct: 2 ICKQRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKL 61
Query: 124 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
CK+ G KG+P+I T+D RTIRYPDP +K NDTI +D+ K++D++KFD GN+ MV
Sbjct: 62 CKIVKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMV 121
Query: 184 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP-KGK 242
TGGRN GRVGI+ +REKH GSF+ +HI+DA H FATRL NVF IGKG+K VSLP K
Sbjct: 122 TGGRNMGRVGIVGHREKHPGSFDIVHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTK 181
Query: 243 GIKLSIIEEARKRQAAQAAA 262
G++L+I EE +R A + AA
Sbjct: 182 GVRLTIAEERDRRLAQKRAA 201
>gi|222088017|gb|ACM41869.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 173
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 139/172 (80%)
Query: 91 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 150
SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP++ T+D RTIRYP
Sbjct: 1 SIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTIRYP 60
Query: 151 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
DPLIK NDTI++DL+ KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H+
Sbjct: 61 DPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHV 120
Query: 211 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
+D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA+ +
Sbjct: 121 KDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQGS 172
>gi|302420133|ref|XP_003007897.1| 40S ribosomal protein S4-A [Verticillium albo-atrum VaMs.102]
gi|261353548|gb|EEY15976.1| 40S ribosomal protein S4-A [Verticillium albo-atrum VaMs.102]
Length = 187
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 109/163 (66%), Positives = 137/163 (84%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL G +AP+PS+GPHK R+C+PLI+ LRNRLKYAL +RE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGTYAPRPSAGPHKLRDCMPLIVFLRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+I+MQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YD KGRF +H ++ EEA+
Sbjct: 61 TRSIMMQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDIKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLD 163
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+D
Sbjct: 121 YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKID 163
>gi|440493255|gb|ELQ75750.1| 40S ribosomal protein S4 [Trachipleistophora hominis]
Length = 267
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/260 (45%), Positives = 170/260 (65%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG +KHLKRL APK W+L K G FAP+PS+GPH+ +E +PL L+L ++L+YA T +E
Sbjct: 1 MVRGPRKHLKRLAAPKSWLLKKNVGVFAPRPSTGPHRLQESIPLSLLLTDKLQYARTGKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL +R + ++G++RTDK +P G DV+SIPKT E++RLLY+ GRF LH + +EE+K
Sbjct: 61 VGNILKERMIKINGRIRTDKRFPVGIFDVLSIPKTGEHYRLLYNVAGRFILHQISEEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
F+L +R + +PY+ T DG + Y D I +DT+K+DLE +I+DF+ VGN+
Sbjct: 121 FRLSIIRKKLLRKGKVPYLYTNDGASFSYCDQDIVPSDTVKVDLETGRISDFLHISVGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+ GRN G VG+I N E+ +++ D G FATR NV IG W+SLP+
Sbjct: 181 AFIKKGRNMGCVGVITNIEEKGVEDCKVYLVDKKGRVFATRKVNVCVIGPDGNSWISLPE 240
Query: 241 GKGIKLSIIEEARKRQAAQA 260
+G+KLS+ +E+ R +
Sbjct: 241 NEGVKLSVFDESNIRYEGET 260
>gi|387594076|gb|EIJ89100.1| ribosomal protein S4 [Nematocida parisii ERTm3]
gi|387595723|gb|EIJ93346.1| ribosomal protein S4 [Nematocida parisii ERTm1]
Length = 277
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 120/252 (47%), Positives = 159/252 (63%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M G +KHLKRLNAP W+LDKLGG FAP+P GPHK RECLPL L++R +L +A +E
Sbjct: 1 MVNGPRKHLKRLNAPNSWILDKLGGTFAPRPRCGPHKLRECLPLCLIVRRKLSFAQNTKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ IL R V VDGKVR D YPAG MDVVS K +EN+RLLY+ +F L + EEAK
Sbjct: 61 VLHILNDRLVKVDGKVRKDPKYPAGVMDVVSFDKIHENYRLLYNVNKKFCLQPITKEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV S + + I ++T DGRTI+Y DP IK D+IK DLE ++ F +VG
Sbjct: 121 FKLCKVLSKRLEGRSILTLHTNDGRTIKYADPSIKIGDSIKFDLESGEVQGFYSLEVGKT 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
G+N G VGII+ + H F ++D G + TR N+ IG + ++LPK
Sbjct: 181 AYAFRGKNLGCVGIIREIKVHISGFSISILEDLNGRMYTTRTDNLMVIGNAGESLITLPK 240
Query: 241 GKGIKLSIIEEA 252
+GI+ + + ++
Sbjct: 241 ERGIRTNAMMDS 252
>gi|321448588|gb|EFX61505.1| hypothetical protein DAPPUDRAFT_304892 [Daphnia pulex]
Length = 176
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 138/178 (77%), Gaps = 3/178 (1%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQR + VDG+VRTD YPAGFMDV++I T E FRL+Y+ KG F +H + A++KLCK
Sbjct: 1 MQRLIKVDGEVRTDSNYPAGFMDVITIDNTGEYFRLVYNVKGCFAIHRI---TAEYKLCK 57
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
VR VQ G KGIP+I T+DGRTIRYPDPL+K NDTI+LD+ NKI DFIKFD GN+ M+ G
Sbjct: 58 VRRVQVGPKGIPFITTHDGRTIRYPDPLVKVNDTIQLDIATNKIMDFIKFDSGNLWMIIG 117
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 243
G N GRVG NRE++ GSF+ H++DALGH FATRL NVF IGKGSK ++SLP+ KG
Sbjct: 118 GCNLGRVGTTINRERYPGSFDIAHVKDALGHLFATRLNNVFIIGKGSKAYISLPRDKG 175
>gi|323304664|gb|EGA58427.1| Rps4bp [Saccharomyces cerevisiae FostersB]
Length = 167
Score = 236 bits (601), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 108/165 (65%), Positives = 133/165 (80%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 230
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGE 165
>gi|189484003|gb|ACE00295.1| ribosomal protein S4 [Caenorhabditis brenneri]
Length = 177
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 134/176 (76%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG KKHLKRL APKHWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E
Sbjct: 2 RGPKKHLKRLAAPKHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
IL QR V VDGKVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H ++ EA FK
Sbjct: 62 KILTQRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEADFK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
LCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ KITDF+KF+ G
Sbjct: 122 LCKVKSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPG 177
>gi|431915230|gb|ELK15917.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 204
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 137/187 (73%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
M DKL G FA PS+ PHK RECLPLI+ LRNRLK AL E I MQR + +DG+V T
Sbjct: 1 MQDKLMGVFATHPSTSPHKLRECLPLIVFLRNRLKCALIGDEDKKICMQRFIKIDGQVWT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGFMD +SI KT ENFRL+YDTKG F +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DVTYPAGFMDDISIDKTGENFRLVYDTKGCFPVHQITSEEAKYKLCKVRKIFVGTKGIPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T TIRY +PLIK NDTI++ LE +ITDFIKFD GN+ VTGG N G++G+I NR
Sbjct: 121 LVTDGAHTIRYSNPLIKVNDTIQIYLETGEITDFIKFDTGNMHTVTGGANLGKIGVITNR 180
Query: 199 EKHKGSF 205
E+H GS
Sbjct: 181 ERHPGSL 187
>gi|378755999|gb|EHY66024.1| ribsomal protein S4 [Nematocida sp. 1 ERTm2]
Length = 278
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/252 (45%), Positives = 158/252 (62%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M G +KHLKRLNAP W+LDKLGG FAP+P GPHK RECLPL L++R +L +A +E
Sbjct: 1 MVNGPRKHLKRLNAPNSWILDKLGGTFAPRPRCGPHKLRECLPLCLIVRRKLSFAQNTKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V+ IL R V VDGK+R D YPAG MDV+S K +EN+RLLY+ +F L + EEAK
Sbjct: 61 VLHILNDRLVKVDGKIRKDPKYPAGIMDVISFDKIHENYRLLYNVNQKFCLQPITKEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FK+CKV + + + I ++T DGRTI+Y DP I D++K +LE ++ + VGN
Sbjct: 121 FKICKVLAKRLEGRSILTLHTNDGRTIKYADPSINIGDSVKFNLETGEVMESFPLKVGNT 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
G+N G VGII+ + H F ++D G + TR N+ IG + ++LPK
Sbjct: 181 AYAFRGKNLGCVGIIREVKVHISGFTISILEDLNGRMYTTRTDNLMAIGTAGESLITLPK 240
Query: 241 GKGIKLSIIEEA 252
+GI+ + + E+
Sbjct: 241 ERGIRTNALMES 252
>gi|429964745|gb|ELA46743.1| hypothetical protein VCUG_01769 [Vavraia culicis 'floridensis']
Length = 267
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 168/261 (64%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG +KHLKRL APK W+L K G FAP+PS+GPH+ E +PL L+L ++L+YA T +E
Sbjct: 1 MVRGPRKHLKRLAAPKSWLLKKNKGVFAPRPSTGPHRLEESIPLSLLLTDKLQYARTAKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL ++ + ++G++RTDK +P G DV+SIPKT E++RL+Y+ GRF LH + +EE+K
Sbjct: 61 VGNILKEKMIKINGRIRTDKRFPVGIFDVLSIPKTGEHYRLMYNVAGRFILHQIGEEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
F+L VR + + +PY+ T DG + Y D I DT+K+DLE +I++ + +GN+
Sbjct: 121 FRLAIVRKKRLRKGKVPYLYTNDGGSFSYCDQDIVPGDTVKVDLETGRISEHLHVAIGNL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+ GRN G VG++ N E+ +++ D FATR NV+ IG W+SLP+
Sbjct: 181 AFIKKGRNMGCVGVVTNIEEKGIGDRKVYLVDKKERVFATRQVNVYVIGPDGSSWISLPE 240
Query: 241 GKGIKLSIIEEARKRQAAQAA 261
G G+KLS+ +E+ R +
Sbjct: 241 GDGVKLSVFDESNIRYEGETV 261
>gi|255710091|gb|ACU30865.1| 40S ribosomal protein S4 [Ochlerotatus triseriatus]
Length = 178
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 139/177 (78%)
Query: 85 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 144
GFMDV++I KT+ENFRL+YD KGRF +H + EEAK+KL KV+ VQ G K +P+I T+DG
Sbjct: 1 GFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPFILTHDG 60
Query: 145 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 204
RTIRYPDP+I ND+I+ D+ K+ D +KF+ GN+ M+TGGRN GRVG + REKH GS
Sbjct: 61 RTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRVGTVIQREKHPGS 120
Query: 205 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 261
FE +HI+D+ GH FATRL NVF IGK +K ++SLPKGKG+KLSI EE +R A++AA
Sbjct: 121 FEIVHIKDSTGHVFATRLTNVFIIGKATKAFISLPKGKGVKLSIAEERDRRLASKAA 177
>gi|414868249|tpg|DAA46806.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 194
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 140/209 (66%), Gaps = 54/209 (25%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLK L+APKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL++RN LKYALTY EV
Sbjct: 32 ARGLKKHLKSLSAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNMLKYALTYCEV 91
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ILMQRHVLVDGK +S P + R++ G FRLH +RDE+A
Sbjct: 92 ISILMQRHVLVDGK--------------MSFPSLRQT-RII----GCFRLHPIRDEDA-- 130
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 181
KANDTIK+DLE NKI DFIKFD+GN+V
Sbjct: 131 ---------------------------------KANDTIKIDLETNKIMDFIKFDIGNVV 157
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHI 210
MVTGGRN VG+IKNREKHKGSFETIH+
Sbjct: 158 MVTGGRNTRHVGVIKNREKHKGSFETIHV 186
>gi|4432937|dbj|BAA21076.1| Y-chromosome linked ribosomal protein S4 [Macaca fuscata]
Length = 165
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 131/165 (79%)
Query: 49 RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 108
RNRLKYALT EV I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGR
Sbjct: 1 RNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGR 60
Query: 109 FRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENK 168
F +H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL K
Sbjct: 61 FAVHRITVEEAKYKLCKVRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGK 120
Query: 169 ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDA 213
I +FIKF+ GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA
Sbjct: 121 IINFIKFETGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDA 165
>gi|219880767|gb|ACL51658.1| ribosomal protein S4 Y-linked 1 [Callithrix jacchus]
Length = 153
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/153 (69%), Positives = 125/153 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHL+RL APKHWMLDKL G FAP+PS+GPH+ RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLRRLVAPKHWMLDKLTGVFAPRPSTGPHRLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVR D TYP G MDV+SI KT E+FRL+YDTKGRF +H +R EEA+
Sbjct: 61 VKKICMQRFIRIDGKVRVDITYPVGLMDVISIEKTGEHFRLVYDTKGRFAVHRIRVEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 153
+KLCKVR + G KGIP++ T+D RTIRYPDP+
Sbjct: 121 YKLCKVRKITMGTKGIPHLVTHDARTIRYPDPV 153
>gi|119632118|gb|EAX11713.1| hCG38986, isoform CRA_a [Homo sapiens]
Length = 160
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/160 (66%), Positives = 127/160 (79%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +DGKVR
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRV 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
+ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD G
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTG 160
>gi|444708012|gb|ELW49140.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 177
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 133/176 (75%)
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 146
MDV+SI KT ENF L+YD KGR +H + EEAK+KLCK+R + G KGIP++ T+D T
Sbjct: 1 MDVISIDKTRENFHLIYDIKGRVAVHCITPEEAKYKLCKMRKIFVGTKGIPHLVTHDAHT 60
Query: 147 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 206
I YPDPLIK NDTI++DLE KITDFIKFD GN+ MVTG N R+G+I NRE+H GSF+
Sbjct: 61 ICYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGHANLKRIGVITNRERHPGSFD 120
Query: 207 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
H++D G+ FAT+ N+F I KG+KPWV LP+GKGI+L+I EE KR AA+ ++
Sbjct: 121 VAHVKDPNGNSFATQPSNIFVISKGNKPWVYLPRGKGIRLTIAEERDKRLAAKQSS 176
>gi|351708512|gb|EHB11431.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 224
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 141/213 (66%), Gaps = 26/213 (12%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G FAP+PS+ HK RECLPLI+ LRNRL YALT EV I MQ + VD KV+T
Sbjct: 1 MLDKLTGVFAPRPSTSSHKLRECLPLIIFLRNRLNYALT-SEVKKICMQHFIKVDDKVQT 59
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D T G F +H + EEAK+KLCKVR + G KGIP+
Sbjct: 60 DIT-------------------------GHFAIHHITPEEAKYKLCKVRKICVGTKGIPH 94
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 198
+ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKFD GN+ MVTGG N G++G+I NR
Sbjct: 95 LVTHDARTIRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTGGANLGKIGVITNR 154
Query: 199 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 231
++H GSF+ H++DA + FAT+L ++ + K
Sbjct: 155 KRHPGSFDVAHVKDANDNRFATQLSHILLLAKA 187
>gi|47935075|gb|AAT39884.1| ribosomal protein S4 [Branchiostoma belcheri tsingtauense]
Length = 158
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 124/158 (78%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQR + VDGKVRTD+ YPAGFMDV++I KT ENFRL+YD KGRF +H + EEAK+KLCK
Sbjct: 1 MQRLIKVDGKVRTDRCYPAGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAKYKLCK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
VR V G KGIP + T+D RTIRYPDP I+ ND++++D+ KITD IKFD GN+ MVTG
Sbjct: 61 VRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTG 120
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLG 223
GRN GRVG++ NRE+H GSF+ +H++D H FATRL
Sbjct: 121 GRNLGRVGLVTNRERHPGSFDIVHVKDTASHTFATRLA 158
>gi|38047855|gb|AAR09830.1| similar to Drosophila melanogaster RpS4, partial [Drosophila
yakuba]
Length = 150
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 103/150 (68%), Positives = 122/150 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V VDGKVRTD TYPAG+MD++++ KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDIITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYP 150
+KLCKV+ Q G KG+P++ T+DGRTIRYP
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYP 150
>gi|290561513|gb|ADD38157.1| 40S ribosomal protein S4 [Lepeophtheirus salmonis]
Length = 266
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 161/254 (63%), Gaps = 4/254 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKH+KR+ AP+ WM++K+GG + +P+ GPHK RE LPL +VLR++L A E
Sbjct: 1 MARGPKKHMKRITAPRSWMMNKMGGVYTVRPAQGPHKRRESLPLQIVLRDKLGLAFNGTE 60
Query: 61 VIAILMQRH--VLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSL--RD 116
IL Q+ V VD K+R + YP G MDV+ +PK +R+ YD KGRF+L L +
Sbjct: 61 CYKILKQKEGLVRVDQKIRREPKYPVGLMDVIDLPKCGLAYRVFYDVKGRFKLMPLEKKT 120
Query: 117 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 176
E +K+C++ I Y+ ++DGRT+RY D + +D++KL+L N+I D I
Sbjct: 121 NEQNYKICRIVKKSVANNKIGYLISHDGRTLRYVDGAVMVHDSVKLNLSTNEIEDHIPLQ 180
Query: 177 VGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWV 236
GN +++ G NRGR+GII +K GS++ + ++DA G F TR+ V IG G+K ++
Sbjct: 181 NGNKALISHGNNRGRIGIIHQIKKFPGSYDLVTLKDARGTTFTTRIDYVMPIGVGNKTFL 240
Query: 237 SLPKGKGIKLSIIE 250
SLP +G+K +I+E
Sbjct: 241 SLPAEEGVKKTILE 254
>gi|402468372|gb|EJW03536.1| hypothetical protein EDEG_02120 [Edhazardia aedis USNM 41457]
Length = 274
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/252 (45%), Positives = 160/252 (63%), Gaps = 2/252 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG +KHLKRL APK WML K GG FA P+ GPH+ RE +PL L+L+ A T +E
Sbjct: 1 MARGPRKHLKRLAAPKSWMLSKTGGIFATNPNCGPHRKRESIPLALLLKKLNL-AATRKE 59
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
IL ++ + V+G+VR+++ YP G DV++I TN ++RLLY+ RF LH + ++EA
Sbjct: 60 EDYILSKKMIKVNGRVRSERKYPVGLFDVLTIQPTNTSYRLLYNITKRFYLHKIDEKEAN 119
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+LCKVRS + G+PY+ T DG R+ P I DT+K+D+ NK+ D IKF G +
Sbjct: 120 VRLCKVRSKKV-VNGVPYVFTEDGMCYRFLSPNIDKKDTLKIDVNSNKVIDSIKFSSGKL 178
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MVT G N G VG+I E H+ + ++++D +G FATR NVF +G W+SLP
Sbjct: 179 AMVTRGNNMGCVGVIVKIETHEIGTDLVYLKDKVGRNFATRGSNVFVVGTTKDTWISLPH 238
Query: 241 GKGIKLSIIEEA 252
G G+K S E++
Sbjct: 239 GLGVKTSEYEKS 250
>gi|241710443|ref|XP_002413398.1| 40S ribosomal protein S4, putative [Ixodes scapularis]
gi|215507212|gb|EEC16706.1| 40S ribosomal protein S4, putative [Ixodes scapularis]
Length = 160
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 121/151 (80%)
Query: 28 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 87
AP+PS+GPHK RE LPLI++LRNRLKYALT EV I+ QR + VDGKVRTD YPAGFM
Sbjct: 1 APRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRTDTNYPAGFM 60
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
DVV+I KT E FRLLYD KGRF LH + EEAK+KLC+V+ VQ G KG+P++ T+D RTI
Sbjct: 61 DVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPFLTTHDARTI 120
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
RYPDPLIK NDT+K+DL KI D+IKFD G
Sbjct: 121 RYPDPLIKVNDTVKVDLATGKIDDYIKFDSG 151
>gi|323332920|gb|EGA74323.1| Rps4bp [Saccharomyces cerevisiae AWRI796]
Length = 164
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/161 (62%), Positives = 126/161 (78%)
Query: 100 RLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDT 159
RL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT
Sbjct: 3 RLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDT 62
Query: 160 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFA 219
+K+DL KITDFIKFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F
Sbjct: 63 VKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFV 122
Query: 220 TRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 260
TRL NVF IG+ KP++SLPKGKGIKLSI EE +R+A Q
Sbjct: 123 TRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQQG 163
>gi|402593341|gb|EJW87268.1| ribosomal protein S4e [Wuchereria bancrofti]
Length = 197
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 129/176 (73%), Gaps = 1/176 (0%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
DV+ I KTNE FRLLYD KGR+ H + ++E KLCK+ G KG+P+I T+D RTI
Sbjct: 22 DVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKIVRKCVGPKGVPFIVTHDARTI 81
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
RYPDP +K NDTI +D+ K++D++KFD GN+ MVTGGRN GRVGI+ +REKH GSF+
Sbjct: 82 RYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHREKHPGSFDI 141
Query: 208 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLP-KGKGIKLSIIEEARKRQAAQAAA 262
+HI+DA H FATRL NVF IGKG+K VSLP KG++L+I EE +R A + A+
Sbjct: 142 VHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTKGVRLTIAEERDRRLAQKRAS 197
>gi|83773390|dbj|BAE63517.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 146
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 96/146 (65%), Positives = 118/146 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPTKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V AI+MQR + VDGKVRTD T+PAGFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA+
Sbjct: 61 VKAIMMQRLIQVDGKVRTDPTFPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAE 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRT 146
+KLCKV+ VQ G+ GIP++ T+D RT
Sbjct: 121 YKLCKVKRVQLGKGGIPFLVTHDART 146
>gi|209737924|gb|ACI69831.1| 40S ribosomal protein S4 [Salmo salar]
Length = 172
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/146 (67%), Positives = 114/146 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA+
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQ 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRT 146
+KLCKV+ G KG+P T R+
Sbjct: 121 YKLCKVKKNLMGTKGVPATQTPSSRS 146
>gi|410043724|ref|XP_003951666.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Pan
troglodytes]
Length = 153
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 116/153 (75%)
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 146
MDV+SI K ENF L+YDTK F +H + E AK+KLCKVR + G KGIP++ T+D T
Sbjct: 1 MDVISIDKMRENFCLIYDTKSCFDVHLITPEVAKYKLCKVRKIFVGTKGIPHLVTHDAHT 60
Query: 147 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 206
I Y DPLIK NDTI++DLE KITDFIKFD G + MVTGG N R+G+I NRE+H GSF+
Sbjct: 61 IHYLDPLIKVNDTIQIDLETGKITDFIKFDAGKLCMVTGGANLERIGVITNRERHPGSFD 120
Query: 207 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
+H++DA G+ FA RL N+F IGKG+KPW+SLP
Sbjct: 121 VVHVKDANGNSFAARLSNIFVIGKGNKPWISLP 153
>gi|148691067|gb|EDL23014.1| mCG3585 [Mus musculus]
Length = 157
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 114/142 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G KKHLK ++APKHWMLDKL G FAP+PS+GPHK RECLP I+ LRNRLKYALT E
Sbjct: 1 MAPGPKKHLKHVSAPKHWMLDKLTGVFAPRPSTGPHKLRECLPPIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKEICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTY 142
+KLCKVR + G KGI ++ T+
Sbjct: 121 YKLCKVRKIFVGTKGILHLVTH 142
>gi|432102129|gb|ELK29938.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 183
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 123/162 (75%), Gaps = 2/162 (1%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQ + ++GKV+TD TYPAGF+DV+SI KT EN RL+YDTK RF +H R EEAK+KLCK
Sbjct: 1 MQWFIEINGKVQTDVTYPAGFVDVISIDKTGENVRLVYDTKSRFAVHR-RPEEAKYKLCK 59
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
VR + G KGIP++ T D RTIRYP+PLIK NDTI++DLE KITDFI D G + M+T
Sbjct: 60 VRKIFMGTKGIPHLVTQDARTIRYPEPLIKVNDTIQIDLESGKITDFITLDTGKLCMITR 119
Query: 186 GRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVF 226
G N G++G+I +REKH GSF+ I H++ A G+ FAT L N+F
Sbjct: 120 GANLGKIGVITDREKHPGSFDIIVHVKYATGNSFATLLSNIF 161
>gi|160948194|emb|CAO94698.1| putative ribosomal protein S4 [Pomphorhynchus laevis]
Length = 137
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/137 (66%), Positives = 110/137 (80%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
RG +KHLKR+ APKHWMLDKLGG FAPKPS GPHK RECLPL++ LRNRL YALTY E
Sbjct: 1 RGQRKHLKRVAAPKHWMLDKLGGVFAPKPSQGPHKMRECLPLLIFLRNRLGYALTYDEAR 60
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I QR + VDGKVRTD +P+GFMDV++I KTNENFRL+YD KGRF +H + +EEA +K
Sbjct: 61 KICKQRDIKVDGKVRTDFRFPSGFMDVITIDKTNENFRLIYDVKGRFVVHRITNEEASYK 120
Query: 123 LCKVRSVQFGQKGIPYI 139
LC+V + Q G KG+P++
Sbjct: 121 LCQVTNAQTGFKGVPFL 137
>gi|401827348|ref|XP_003887766.1| 40S ribosomal protein S4 [Encephalitozoon hellem ATCC 50504]
gi|392998773|gb|AFM98785.1| 40S ribosomal protein S4 [Encephalitozoon hellem ATCC 50504]
Length = 268
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 158/252 (62%), Gaps = 3/252 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M+ G + HLKR APK WMLDK GG FA P+SGPH+ EC+PL ++ LKYA +E
Sbjct: 1 MSTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHRKTECIPLGYLISRFLKYASNSKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ IL +++ V+GK RT+ +P G DV+SI KT E+FR+LY+ + +F LH + EEAK
Sbjct: 61 LAIILKGKNIKVNGKARTNSHFPVGLFDVISIEKTGEHFRVLYNVQKKFHLHRINSEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
++L KV + ++ +GIPY+ + G +IR+ DP I+ TIK+ E +K+ ++I V I
Sbjct: 121 YRLAKV-TKKYKYQGIPYVVSSCGLSIRFCDPAIEQEYTIKISNETSKVIEYIAPGVDKI 179
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLP 239
V V+ G+ RGR+GII E +G + D G+ F+ + IG+ S+ ++LP
Sbjct: 180 VFVSRGKARGRIGIINTIEV-QGKDTVYVMTDFAGNTFSCTSKSCIIIGESSENILITLP 238
Query: 240 KGKGIKLSIIEE 251
KGI+LS +E+
Sbjct: 239 SEKGIRLSELEK 250
>gi|431916529|gb|ELK16507.1| Contactin-5, partial [Pteropus alecto]
Length = 713
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 119/155 (76%), Gaps = 1/155 (0%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
DV+SI KT ENF +YDTKG F +H + EEAK+KLCK+R + G+K + ++ T+D TI
Sbjct: 347 DVISIDKTRENFLQIYDTKGLFAVH-ITPEEAKYKLCKMRKIFVGRKELLHLVTHDAGTI 405
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
R PDPLIK NDTI++DLE KI +FIKFD N+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 406 RCPDPLIKVNDTIQIDLETEKIIEFIKFDTDNLFMVTGGDNLGRIGVITNRERHPGSFDL 465
Query: 208 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
+H++DA G+ FAT L N+F IGKG+KPW+SLP GK
Sbjct: 466 VHVKDANGNNFATWLSNIFVIGKGNKPWISLPHGK 500
>gi|19173414|ref|NP_597217.1| 40S RIBOSOMAL PROTEIN S4 [Encephalitozoon cuniculi GB-M1]
gi|74621136|sp|Q8SRB9.1|RS4_ENCCU RecName: Full=40S ribosomal protein S4
gi|19171003|emb|CAD26393.1| 40S RIBOSOMAL PROTEIN S4 [Encephalitozoon cuniculi GB-M1]
Length = 268
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 157/252 (62%), Gaps = 3/252 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M G + HLKR APK WMLDK GG FA P+SGPHK EC+PL ++ L+YA ++E
Sbjct: 1 MPTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ IL ++++ V+G+VRT+ +P G DVVSI KT E+FR+LY+ +F LH + EEA
Sbjct: 61 LSIILAEKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
++L KV + ++ +GIPYI + G +IR+ DP I TIK+ E +K+ ++I +
Sbjct: 121 YRLTKV-TKKYENQGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKV 179
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLP 239
+ V+ G+ RGRVG+I N +G + D G+ F+ + IG+ S+ W++LP
Sbjct: 180 IFVSRGKARGRVGVI-NTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLP 238
Query: 240 KGKGIKLSIIEE 251
K +GI+ S +E+
Sbjct: 239 KERGIRQSELEK 250
>gi|449328827|gb|AGE95103.1| 40S ribosomal protein S4 [Encephalitozoon cuniculi]
Length = 268
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 157/252 (62%), Gaps = 3/252 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M G + HLKR APK WMLDK GG FA P+SGPHK EC+PL ++ L+YA ++E
Sbjct: 1 MPTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ IL ++++ V+G+VRT+ +P G DVVSI KT E+FR+LY+ +F LH + EEA
Sbjct: 61 LSIILDEKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
++L KV + ++ +GIPYI + G +IR+ DP I TIK+ E +K+ ++I +
Sbjct: 121 YRLTKV-TKKYENQGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKV 179
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLP 239
+ V+ G+ RGRVG+I N +G + D G+ F+ + IG+ S+ W++LP
Sbjct: 180 IFVSKGKARGRVGVI-NTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLP 238
Query: 240 KGKGIKLSIIEE 251
K +GI+ S +E+
Sbjct: 239 KERGIRQSELEK 250
>gi|440904091|gb|ELR54652.1| hypothetical protein M91_21175, partial [Bos grunniens mutus]
Length = 130
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 107/130 (82%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQ + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCK
Sbjct: 1 MQHFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITTEEAKYKLCK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTG
Sbjct: 61 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 120
Query: 186 GRNRGRVGII 195
G N GR+G+I
Sbjct: 121 GANLGRIGVI 130
>gi|225714340|gb|ACO13016.1| 40S ribosomal protein S4-3 [Lepeophtheirus salmonis]
gi|290462551|gb|ADD24323.1| 40S ribosomal protein S4-3 [Lepeophtheirus salmonis]
Length = 265
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 147/251 (58%), Gaps = 1/251 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG +KHLKRL AP WML K G +AP+ SSGPHK E +PL ++L +LK A T +E
Sbjct: 1 MVRGPRKHLKRLYAPTSWMLKKSEGRYAPRISSGPHKKDESIPLRILLSKKLKIASTSKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V IL R + V+ VRTDK +P G D +++ + RLLY+T G+F L + E++
Sbjct: 61 VEYILRNRMIKVNNNVRTDKDFPVGIFDTLTVGDNKDFLRLLYNTDGKFVLKRISKEDSM 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
K+ KVR + +PY+ T DG R+ D IK N T+K+D E NKI F+K VG+I
Sbjct: 121 TKIVKVRETAIRKGNVPYVYTMDGCCYRFCDQNIKKNFTVKIDFETNKIVKFLKLVVGSI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLP 239
V G+NRG VG + E+++ S I IQD G EF+T + IG + + L
Sbjct: 181 VFTINGKNRGSVGKVIGIEENEYSENIIKIQDFNGREFSTIESSTICIGNKVDNYEIQLL 240
Query: 240 KGKGIKLSIIE 250
KGIK SI+E
Sbjct: 241 DTKGIKKSILE 251
>gi|396081888|gb|AFN83502.1| 40S ribosomal protein S4 [Encephalitozoon romaleae SJ-2008]
Length = 268
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 161/253 (63%), Gaps = 5/253 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M G + HLKR AP+ WMLDK GG FA P+SGPH+ EC+PL ++ LKYA +E
Sbjct: 1 MPTGHRDHLKRKTAPESWMLDKQGGTFALMPASGPHRKTECIPLGYLISRFLKYAGNSKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ +L +++ V+GKVRT+ +P G DV+SI KT E+FR+LY+T +F LH + +EA
Sbjct: 61 LGIVLGGKNIKVNGKVRTNSHFPVGLFDVISIEKTGEHFRVLYNTHKKFHLHKISSQEAG 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
++L KV + ++ +GIPY+ + G +IR+ DP I+ TIK+ E +K+ + I V +
Sbjct: 121 YRLAKV-TKKYTSRGIPYVVSSCGLSIRFCDPAIEQEYTIKISNETSKVVEHIAPGVDKV 179
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQ-DALGHEFATRLGNVFTIGKGSKP-WVSL 238
V V+ G+ RGR+G+I N +G ET+++ D G+ F+ + IG+ S+ W++L
Sbjct: 180 VFVSRGKARGRIGVI-NTIDVQGK-ETVYVMTDFAGNTFSCTSKSCIIIGESSENIWITL 237
Query: 239 PKGKGIKLSIIEE 251
PK GI+LS +E+
Sbjct: 238 PKENGIRLSELEK 250
>gi|444732233|gb|ELW72539.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 512
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLK + PKH MLDKL G FAP+PS+GP K RECL I+ LRNRLK ALT E
Sbjct: 1 MARGPKKHLKWVAVPKHQMLDKLTGVFAPRPSTGP-KLRECLSFIIFLRNRLKNALTGDE 59
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKV TD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H +EAK
Sbjct: 60 VKKICMQRFIKIDGKVCTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRNTPQEAK 119
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPD 151
+KLCKVR + G +GIP + T+D TI YPD
Sbjct: 120 YKLCKVRKIFVGTEGIPRLVTHDAHTICYPD 150
>gi|431897155|gb|ELK06417.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 155
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 113/152 (74%), Gaps = 5/152 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA GLKKHLK + AP HWMLDKL G FAP+PS+GPHK ECLP I+ LRNRLKYALT E
Sbjct: 6 MAGGLKKHLKCVAAPTHWMLDKLTGMFAPRPSTGPHKLGECLPPIIFLRNRLKYALTGDE 65
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I QR + +DGKVRTD TYPAGFMD +SI KT ENFRL+Y TK RF +H + EEA
Sbjct: 66 V-KICRQRFINIDGKVRTDMTYPAGFMDAISINKTRENFRLVYGTKCRFAVHRITTEEAD 124
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP 152
+KLCKVR + G K +P +D RTIRYP+P
Sbjct: 125 YKLCKVRKIFVGTKKVP----HDPRTIRYPNP 152
>gi|332213865|ref|XP_003256051.1| PREDICTED: 40S ribosomal protein S4, Y isoform 2-like [Nomascus
leucogenys]
Length = 170
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 111/142 (78%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N+T+++DL KIT FIKFD GN+
Sbjct: 28 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNNTVQIDLGTGKITSFIKFDTGNV 87
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
MV GG N GRVG++ NRE+H GS +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 88 CMVIGGANLGRVGVVTNRERHPGSCNVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 147
Query: 241 GKGIKLSIIEEARKRQAAQAAA 262
GKGI+L+I EE KR AA+ ++
Sbjct: 148 GKGIRLTIAEEREKRLAAKQSS 169
>gi|379072624|gb|AFC92944.1| ribosomal protein S4, X-linked, partial [Pipa carvalhoi]
Length = 129
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 107/128 (83%)
Query: 134 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 193
KGIP++ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 61
Query: 194 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 253
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKGSKPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGSKPWISLPRGKGIRLTIAEERD 121
Query: 254 KRQAAQAA 261
KR AA+ +
Sbjct: 122 KRLAAKQS 129
>gi|82393859|gb|ABB72228.1| ribosomal protein S4 X-linked [Bos taurus]
Length = 127
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/123 (71%), Positives = 103/123 (83%)
Query: 72 VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 131
+DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR +
Sbjct: 4 IDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFV 63
Query: 132 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 191
G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR
Sbjct: 64 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 123
Query: 192 VGI 194
+G+
Sbjct: 124 IGV 126
>gi|291410370|ref|XP_002721473.1| PREDICTED: ribosomal protein S4, X-linked-like [Oryctolagus
cuniculus]
Length = 291
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Query: 72 VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 131
+ V+T YPAGF+DV+S K ENF L DTKG F +H + EEAK+KLCKVR +
Sbjct: 101 ISWDVQTGTCYPAGFVDVMSFDKIRENFCLTCDTKGHFAVHCIIPEEAKYKLCKVRKILV 160
Query: 132 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 191
G KGI + T+D TI YP LIK TI DLE K+TD D ++ MV G GR
Sbjct: 161 GTKGILHCVTHDAPTIGYPHTLIKVKGTIPTDLEAGKVTDITTSDTNSLCMVPGDATLGR 220
Query: 192 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 251
G++ NRE+H GSF+ + I DA G FAT+L N+FT GKG+KPW SL +G+GI L+ EE
Sbjct: 221 TGVVTNRERHPGSFDVVDINDANGSSFATQLANIFT-GKGNKPWTSLHQGRGICLTFAEE 279
Query: 252 ARKRQAAQAAA 262
R+AA+ ++
Sbjct: 280 RDGRRAARQSS 290
>gi|379072626|gb|AFC92945.1| ribosomal protein S4, X-linked, partial [Rhinophrynus dorsalis]
Length = 129
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 107/128 (83%)
Query: 134 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 193
KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GRVG
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRVG 61
Query: 194 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 253
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERG 121
Query: 254 KRQAAQAA 261
KR AA+ +
Sbjct: 122 KRLAAKQS 129
>gi|303390290|ref|XP_003073376.1| 40S ribosomal protein S4 [Encephalitozoon intestinalis ATCC 50506]
gi|303302522|gb|ADM12016.1| 40S ribosomal protein S4 [Encephalitozoon intestinalis ATCC 50506]
Length = 268
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 153/251 (60%), Gaps = 3/251 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M G + HLKR APK WML+K GG FA P+SGPH+ EC+PL ++ LKY+ +E
Sbjct: 1 MPTGHRDHLKRKTAPKSWMLNKQGGTFAMMPASGPHRKTECIPLGYLISRFLKYSSNSKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ IL ++V V+GKVRT+ +P G DVVSI KT E+FR+LY+ +F LH + EA
Sbjct: 61 LRIILDGKNVKVNGKVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRINSSEAS 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
++L KV + ++ + +PY+ + G +IR+ DP I TIK+ E +K+ ++I+ V +
Sbjct: 121 YRLAKV-TKKYESQNVPYVVSSCGLSIRFCDPAIDVGYTIKISNETSKVIEYIEPGVDKV 179
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLP 239
V V+ G+ RGR+G+I N +G + D GH F+ + IG+ + ++LP
Sbjct: 180 VFVSSGKARGRIGVI-NTISIQGKEVVYGMTDFAGHTFSCTSKSCILIGESEENILITLP 238
Query: 240 KGKGIKLSIIE 250
K +GI+LS +E
Sbjct: 239 KERGIRLSSLE 249
>gi|67621222|ref|XP_667747.1| 40S ribosomal protein S4 [Cryptosporidium hominis TU502]
gi|54658904|gb|EAL37512.1| 40S ribosomal protein S4 [Cryptosporidium hominis]
Length = 152
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 111/152 (73%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY E I+MQR + VDGKVRT
Sbjct: 1 MLDKLTGVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTEAKYIVMQRLIKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D +P G MDVVSI + +N R++YDTKGRF + +EA FKLCKV V G KGIP
Sbjct: 61 DICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGFKLCKVTKVALGAKGIPT 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKLDLEENKIT 170
T D RT+RY P +KANDT+K+DL K++
Sbjct: 121 ATTNDARTLRYIHPDVKANDTVKVDLATGKVS 152
>gi|379072628|gb|AFC92946.1| ribosomal protein S4, X-linked, partial [Hymenochirus curtipes]
Length = 129
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 107/128 (83%)
Query: 134 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 193
KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 61
Query: 194 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 253
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD 121
Query: 254 KRQAAQAA 261
KR AA+ +
Sbjct: 122 KRLAAKQS 129
>gi|91694809|gb|ABE41835.1| ribosomal protein S4 [Marmota monax]
Length = 120
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/120 (75%), Positives = 100/120 (83%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
>gi|255641952|gb|ACU21243.1| unknown [Glycine max]
Length = 123
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 94/98 (95%)
Query: 162 LDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 221
LDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR
Sbjct: 21 LDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATR 80
Query: 222 LGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 259
+GNVF IGKG+KPWVSLPKGKGIKLSIIEEARKR AAQ
Sbjct: 81 MGNVFIIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQ 118
>gi|221039598|dbj|BAH11562.1| unnamed protein product [Homo sapiens]
Length = 132
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/123 (72%), Positives = 100/123 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + +DGKVRTD TYPAG MDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGLMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 FKL 123
+
Sbjct: 121 VSV 123
>gi|297694118|ref|XP_002824341.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Pongo abelii]
Length = 134
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 107/134 (79%)
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 146
M+V+SI KT ENF L+YDTK F +H + EEAK+KLCKVR + G KGIP++ T+DGRT
Sbjct: 1 MEVISIDKTEENFCLIYDTKSLFAVHHITPEEAKYKLCKVRKIFLGTKGIPHLVTHDGRT 60
Query: 147 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 206
I YPDPLIK NDTI++DLE +KITDFIKFD G++ MVTG N GR+G+I NRE+H GSF+
Sbjct: 61 IHYPDPLIKVNDTIQIDLETSKITDFIKFDTGHLCMVTGSANLGRIGVITNRERHPGSFD 120
Query: 207 TIHIQDALGHEFAT 220
IH++DA G+ FAT
Sbjct: 121 IIHMKDANGNSFAT 134
>gi|343473039|emb|CCD14964.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 64 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 123
IL Q V VDGK R D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA K+
Sbjct: 2 ILRQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKM 61
Query: 124 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
KV +V G IP T+DG IRYPDP DT+ D++ K+TD IK G +VMV
Sbjct: 62 MKVVNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMV 121
Query: 184 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGK 242
TGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK S V+LPK
Sbjct: 122 TGGANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQL 181
Query: 243 GIKLSIIEEARKRQAA 258
G++ ++I E ++ A
Sbjct: 182 GLRKNVIVEREEKLIA 197
>gi|402582302|gb|EJW76248.1| 40S ribosomal protein S4, partial [Wuchereria bancrofti]
Length = 135
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/135 (66%), Positives = 100/135 (74%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG K+HLKRL APKHWMLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E
Sbjct: 1 MARGPKRHLKRLAAPKHWMLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
I QR + VDGKVRTD +PAGFMDV+ I KTNE FRLLYD KGR+ H + ++E
Sbjct: 61 ARMICKQRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGN 120
Query: 121 FKLCKVRSVQFGQKG 135
KLCK+ G KG
Sbjct: 121 IKLCKIVRKCVGPKG 135
>gi|444724744|gb|ELW65342.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 145
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 104/144 (72%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
MLDKL FAP PS+GPHK + CLPLI+ LRNRLKYAL EV + QR + V GKVRT
Sbjct: 1 MLDKLTSVFAPGPSAGPHKLKGCLPLIIFLRNRLKYALAGDEVKKVCTQRFIKVAGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
D TYP GFM V SI KT ENFRL+YDTKG F +H + EEAK+KLCKVR + G KG P+
Sbjct: 61 DITYPVGFMGVTSIDKTRENFRLIYDTKGHFTVHRVTPEEAKYKLCKVRKIFEGTKGTPH 120
Query: 139 INTYDGRTIRYPDPLIKANDTIKL 162
+ T+ T RYPDPLIK NDT +L
Sbjct: 121 LVTHVAHTTRYPDPLIKVNDTFRL 144
>gi|342906104|gb|AEL79335.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 132
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 105/131 (80%)
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
KV+ VQ G +GIP++ T+DGRTIRYPDPL K NDTI+LD+ +KI D I+ D GN+ M+T
Sbjct: 2 KVKKVQTGPRGIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATSKIIDIIRMDSGNLCMIT 61
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGI 244
GGRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKGSK +VSLPKGKG+
Sbjct: 62 GGRNLGRVGTVVNRERHPGSFDIVHVKDASGHMFATRLNNVFIIGKGSKAYVSLPKGKGV 121
Query: 245 KLSIIEEARKR 255
KLSI EE KR
Sbjct: 122 KLSIAEERDKR 132
>gi|355428416|gb|AER92524.1| hypothetical protein, partial [Triatoma rubida]
Length = 133
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 105/131 (80%)
Query: 132 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 191
G + IP++ T+DGRTIRYPDPL K NDTI+LD+ +KI D I+ D GN+ M+TGGRN GR
Sbjct: 2 GAERIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATSKIIDIIRMDSGNLCMITGGRNLGR 61
Query: 192 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 251
VG + NRE+H GSF+ +H++DA GH FATRL NVF IGKGSK +VSLPKGKG+KLSI EE
Sbjct: 62 VGTVVNRERHPGSFDIVHVKDASGHMFATRLNNVFIIGKGSKAYVSLPKGKGVKLSIAEE 121
Query: 252 ARKRQAAQAAA 262
KR AA+AA+
Sbjct: 122 RDKRLAAKAAS 132
>gi|350594665|ref|XP_003483943.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Sus scrofa]
Length = 221
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 108/144 (75%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G +K+LK + APKHWMLDKL G FAP PS+ P+K RECLPLI+ LR+RLK A+ E
Sbjct: 1 MAHGPQKYLKHVAAPKHWMLDKLTGIFAPCPSTRPYKLRECLPLIIFLRHRLKGAIIGEE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I M R + +DGKV TD TYPAGFMDVVSI KT E+F L+YDTKG F +H + EEAK
Sbjct: 61 VKEICMPRFIKIDGKVCTDITYPAGFMDVVSINKTGEDFCLIYDTKGCFAIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDG 144
+KLCKV + G +GIP++ T+DG
Sbjct: 121 YKLCKVGKIFMGIQGIPHLVTHDG 144
>gi|347524208|ref|YP_004781778.1| 30S ribosomal protein S4E, central domain containing protein
[Pyrolobus fumarii 1A]
gi|343461090|gb|AEM39526.1| Ribosomal protein S4E, central domain protein [Pyrolobus fumarii
1A]
Length = 255
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 149/253 (58%), Gaps = 13/253 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G ++HLK L APK W + + G F KP GPH C+PL++++R+ L YA T R
Sbjct: 1 MARMGGRRHLKTLAAPKFWPVRERAGVFTVKPRPGPHPLHRCIPLLVLVRDVLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E I+ + H VDG+VR D +P GFMDVV + T E +R+L F LH + DEEA
Sbjct: 61 EARKIIAEGHFKVDGRVRRDYKFPVGFMDVVEVVDTGEKYRILPYPTRFFILHPISDEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPLIKAND--------TIKLDLEENKI 169
K KLC++ + G ++ +DGR IR DP +A++ T+K+ + +I
Sbjct: 121 KVKLCRIEDKSTVKGGHVQLHCHDGRNVLIRVSDP-TRADEAKPYRTLGTLKITIPGQEI 179
Query: 170 TDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTI 228
D++ +VGN+ +V GGRN GRVG I ++ G +I ++DA G +F T L VF I
Sbjct: 180 LDYVPLEVGNLAIVFGGRNVGRVGKIVEIQRGMGRKRSIVTLEDARGEKFQTSLDYVFVI 239
Query: 229 GKGSKPWVSLPKG 241
GKG +P +SLP+G
Sbjct: 240 GKGDEPLISLPEG 252
>gi|432102968|gb|ELK30365.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 301
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 111/168 (66%), Gaps = 23/168 (13%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLK + APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LR RLKYALT E
Sbjct: 1 MARGPKKHLKHVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRIRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR F+D KT ENFRL+YDTKG F +H R EEAK
Sbjct: 61 VKKICMQR-----------------FID-----KTGENFRLVYDTKGCFAVHR-RPEEAK 97
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENK 168
+KLCKVR + G KGIP++ T+D RTI YPDPLIK + + E K
Sbjct: 98 YKLCKVRKIFVGTKGIPHLVTHDARTICYPDPLIKLSQKLPEKWESVK 145
>gi|449471049|ref|XP_004153193.1| PREDICTED: 40S ribosomal protein S4-like, partial [Cucumis sativus]
Length = 102
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/101 (87%), Positives = 92/101 (91%), Gaps = 3/101 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLL 102
IAILMQRHVLVD KVRTDKTYPAGFM ++ +N N LL
Sbjct: 62 IAILMQRHVLVDAKVRTDKTYPAGFMGMLI---SNSNSILL 99
>gi|350594667|ref|XP_003483944.1| PREDICTED: hypothetical protein LOC100738356 [Sus scrofa]
Length = 365
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 108/144 (75%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA G +K+LK + APKHWMLDKL G FAP PS+ P+K RECLPLI+ LR+RLK A+ E
Sbjct: 1 MAHGPQKYLKHVAAPKHWMLDKLTGIFAPCPSTRPYKLRECLPLIIFLRHRLKGAIIGEE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I M R + +DGKV TD TYPAGFMDVVSI KT E+F L+YDTKG F +H + EEAK
Sbjct: 61 VKEICMPRFIKIDGKVCTDITYPAGFMDVVSINKTGEDFCLIYDTKGCFAIHRITPEEAK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDG 144
+KLCKV + G +GIP++ T+DG
Sbjct: 121 YKLCKVGKIFMGIQGIPHLVTHDG 144
>gi|242052939|ref|XP_002455615.1| hypothetical protein SORBIDRAFT_03g014410 [Sorghum bicolor]
gi|241927590|gb|EES00735.1| hypothetical protein SORBIDRAFT_03g014410 [Sorghum bicolor]
Length = 129
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/115 (77%), Positives = 97/115 (84%), Gaps = 12/115 (10%)
Query: 69 HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRS 128
HVLVDGK RTDKTY GFMDV+SIPKT EN+R+LYDTKGRFRLHS+RDE+AKF
Sbjct: 26 HVLVDGKFRTDKTY--GFMDVISIPKTGENYRILYDTKGRFRLHSVRDEDAKF------- 76
Query: 129 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
GQKGIPY+NTYDGRTIRYPDPLIKANDTIK+ L NKI DFIKFDVGN+VMV
Sbjct: 77 ---GQKGIPYLNTYDGRTIRYPDPLIKANDTIKIYLVTNKIVDFIKFDVGNVVMV 128
>gi|414588932|tpg|DAA39503.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 143
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/106 (78%), Positives = 90/106 (84%)
Query: 105 TKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 164
T G FRLH +RDE+ KFKLCKVRSVQFGQ GIPY+NTYDG TIRYPDPLIKAND IK+DL
Sbjct: 30 TTGCFRLHPIRDEDIKFKLCKVRSVQFGQTGIPYLNTYDGHTIRYPDPLIKANDNIKIDL 89
Query: 165 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
E NKI DF KFDVGN+VMVT GRN RVG+IKN EKHKGSFE I +
Sbjct: 90 ETNKIMDFFKFDVGNVVMVTDGRNTERVGVIKNWEKHKGSFEVIDV 135
>gi|413925809|gb|AFW65741.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 140
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 80/92 (86%), Positives = 85/92 (92%)
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
+FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFI FDVG
Sbjct: 41 VQFKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFINFDVG 100
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
N+VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 101 NVVMVTGGRNTGRVGAIKNREKHKGSFETIHV 132
>gi|413948199|gb|AFW80848.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 225
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/93 (88%), Positives = 88/93 (94%)
Query: 116 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 175
D +A FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKF
Sbjct: 118 DHKAHFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKF 177
Query: 176 DVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 208
DVGN+VMVTGGRN GRVG+IKNREKHKGSFETI
Sbjct: 178 DVGNVVMVTGGRNTGRVGVIKNREKHKGSFETI 210
>gi|222064029|emb|CAQ86677.1| putative ribosomal protein L18 [Histomonas meleagridis]
Length = 172
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 117/164 (71%)
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 146
MDV+ + K+NE FRLLYD KGRF H + +EA+FKL ++ G++G+P++ +DG T
Sbjct: 1 MDVIELGKSNEQFRLLYDAKGRFVAHKIEPKEAEFKLLRINKYFIGERGVPHLVAHDGHT 60
Query: 147 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 206
+RY DP I+ NDT+K +L+ +++ +FIKF+ GN+ MVT G N GRVG+I++ E F
Sbjct: 61 LRYVDPSIRMNDTVKYNLKTHEVDNFIKFEKGNVAMVTSGGNVGRVGVIQSIEPQMVGFS 120
Query: 207 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 250
+HI+DA G EFATR+ NVF IG+G P +SLP+ G++ SI+E
Sbjct: 121 IVHIKDASGAEFATRIPNVFVIGQGENPLISLPRRAGVRPSILE 164
>gi|414589886|tpg|DAA40457.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 190
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/93 (88%), Positives = 87/93 (93%)
Query: 116 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 175
D +A FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKF
Sbjct: 83 DHKAHFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKF 142
Query: 176 DVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 208
DVGN+VMVTGGRN RVG+IKNREKHKGSFETI
Sbjct: 143 DVGNVVMVTGGRNTRRVGVIKNREKHKGSFETI 175
>gi|195552762|ref|XP_002076537.1| GD17639 [Drosophila simulans]
gi|194202148|gb|EDX15724.1| GD17639 [Drosophila simulans]
Length = 145
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/120 (70%), Positives = 97/120 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I+MQR V VDGKVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
>gi|413933474|gb|AFW68025.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 387
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 90/103 (87%)
Query: 108 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 167
+ + S E FKLCKVRSVQFGQKGIPY+NTYDGRTIRY DPLIKANDTIK++LE N
Sbjct: 277 QITMDSASVETNMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYHDPLIKANDTIKINLETN 336
Query: 168 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
KI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 337 KIMDFIKFDVGNMVMVTGGRNTGRVGVIKNREKHKGSFETIHV 379
>gi|413925805|gb|AFW65737.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 167
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 88/103 (85%)
Query: 108 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 167
+ + S E FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE N
Sbjct: 57 QITMDSASVETNMFKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETN 116
Query: 168 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
KI DFI FDVGN+VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 117 KIMDFINFDVGNVVMVTGGRNTGRVGAIKNREKHKGSFETIHV 159
>gi|300174358|gb|ADJ68147.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174362|gb|ADJ68149.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174366|gb|ADJ68151.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174374|gb|ADJ68155.1| putative RpS4 protein [Caenacis lauta]
Length = 122
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 98/122 (80%)
Query: 23 LGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 82
LGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRTD Y
Sbjct: 1 LGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNY 60
Query: 83 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 142
PAGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP++ T+
Sbjct: 61 PAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTH 120
Query: 143 DG 144
DG
Sbjct: 121 DG 122
>gi|293336106|ref|NP_001169793.1| uncharacterized protein LOC100383683 [Zea mays]
gi|223949565|gb|ACN28866.1| unknown [Zea mays]
gi|224031705|gb|ACN34928.1| unknown [Zea mays]
Length = 107
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/92 (88%), Positives = 86/92 (93%)
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
A F LCKVRSVQFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVG
Sbjct: 8 AFFMLCKVRSVQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVG 67
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
N+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 68 NVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 99
>gi|402697608|gb|AFQ90989.1| X-linked ribosomal protein S4, partial [Draco sumatranus]
Length = 193
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 109/193 (56%)
Query: 16 KHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGK 75
KHWMLDKL G FAP+PS+GPHK RECLPLI+ LR RJKY LT EV I MQR + +DGK
Sbjct: 1 KHWMLDKLTGVFAPRPSTGPHKXRECLPLIIFLRXRJKYXLTGDEVKKICMQRFIKIDGK 60
Query: 76 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKG 135
VRTD TYP GFMDV+S K EB RL+ DTKGRF +H + EEAK+KLCKVR + G KG
Sbjct: 61 VRTDITYPXGFMDVISXEKXGEBXRLVXDTKGRFAVHRIXPEEAKYKLCKVRKIFVGTKG 120
Query: 136 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 195
IP++ R+G+I
Sbjct: 121 IPHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIGVI 180
Query: 196 KNREKHKGSFETI 208
N E+H GSF+ +
Sbjct: 181 TNXERHPGSFDVV 193
>gi|344246835|gb|EGW02939.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 130
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 97/121 (80%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQR + +DGKVRTD TYPAGFM+V+SI KT ENF L+YDTKGRF +H + EEAK+KLCK
Sbjct: 1 MQRFIKIDGKVRTDITYPAGFMNVISIDKTGENFGLIYDTKGRFAVHRITPEEAKYKLCK 60
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
VR + G KGI ++ T+D RTI+YPDPLIK NDTI++DLE KI DFIKFD N+ MVTG
Sbjct: 61 VRKIFVGTKGILHLMTHDARTIQYPDPLIKVNDTIQIDLETGKIIDFIKFDAANLCMVTG 120
Query: 186 G 186
G
Sbjct: 121 G 121
>gi|300174364|gb|ADJ68150.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174370|gb|ADJ68153.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174372|gb|ADJ68154.1| putative RpS4 protein [Cecidostiba fungosa]
gi|401878838|gb|AFQ30711.1| putative RpS4, partial [Cecidostiba semifascia]
gi|401878840|gb|AFQ30712.1| putative RpS4, partial [Cecidostiba semifascia]
gi|401878842|gb|AFQ30713.1| putative RpS4, partial [Cecidostiba semifascia]
Length = 121
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 97/121 (80%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYP 60
Query: 84 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 143
AGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP++ T+D
Sbjct: 61 AGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTHD 120
Query: 144 G 144
G
Sbjct: 121 G 121
>gi|413925806|gb|AFW65738.1| putative ribosomal protein S4 (RPS4A) family protein isoform 1 [Zea
mays]
gi|413925807|gb|AFW65739.1| putative ribosomal protein S4 (RPS4A) family protein isoform 2 [Zea
mays]
gi|413925808|gb|AFW65740.1| putative ribosomal protein S4 (RPS4A) family protein isoform 3 [Zea
mays]
Length = 99
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/90 (88%), Positives = 84/90 (93%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFI FDVGN+
Sbjct: 2 FKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFINFDVGNV 61
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 62 VMVTGGRNTGRVGAIKNREKHKGSFETIHV 91
>gi|119595939|gb|EAW75533.1| hCG2043550 [Homo sapiens]
Length = 157
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/120 (68%), Positives = 94/120 (78%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLK++ APKHWML+KL G FAP PS+ PH RECLPLI+ LRNRLKY LT E
Sbjct: 1 MARGPKKHLKQVAAPKHWMLNKLTGVFAPHPSTSPHNLRECLPLIIFLRNRLKYVLTGNE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V I MQR + ++GKVRTD TY AGFMDV SI K+ ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQRFIKINGKVRTDITYSAGFMDVNSIDKSGENFRLIYDTKGRFAVHRITPEEAK 120
>gi|300174368|gb|ADJ68152.1| putative RpS4 protein [Cecidostiba fungosa]
Length = 122
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/122 (66%), Positives = 97/122 (79%)
Query: 23 LGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 82
L G +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRTD Y
Sbjct: 1 LVGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNY 60
Query: 83 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 142
PAGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP++ T+
Sbjct: 61 PAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTH 120
Query: 143 DG 144
DG
Sbjct: 121 DG 122
>gi|413923241|gb|AFW63173.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 457
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/103 (77%), Positives = 89/103 (86%)
Query: 108 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 167
+ + S E FKLCKVRSVQFGQKGIPY+NTY+GRTIRYPD LIKANDTIK+DLE N
Sbjct: 347 QITMDSASVETNMFKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDSLIKANDTIKIDLEIN 406
Query: 168 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
KI DFIKFDV N+VMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 407 KIMDFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGNFETIHV 449
>gi|413923240|gb|AFW63172.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 442
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/103 (77%), Positives = 89/103 (86%)
Query: 108 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 167
+ + S E FKLCKVRSVQFGQKGIPY+NTY+GRTIRYPD LIKANDTIK+DLE N
Sbjct: 332 QITMDSASVETNMFKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDSLIKANDTIKIDLEIN 391
Query: 168 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
KI DFIKFDV N+VMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 392 KIMDFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGNFETIHV 434
>gi|300707086|ref|XP_002995766.1| hypothetical protein NCER_101255 [Nosema ceranae BRL01]
gi|239604977|gb|EEQ82095.1| hypothetical protein NCER_101255 [Nosema ceranae BRL01]
Length = 263
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 146/253 (57%), Gaps = 6/253 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M G +KHL R A W +DK G +A + SGPHK C+PL VL+ L+YA +E
Sbjct: 1 MTGGPRKHLNRQVALDSWKIDKSIGTYAIRTHSGPHKKDLCIPLAYVLQYFLEYAHNRKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ IL ++++++GKV + +P G DV+S+ KTN ++R+L+ F LH + +EE+K
Sbjct: 61 IQIILKSKNIMINGKVIEKRKFPVGVGDVISVVKTNLHYRVLFGVDKSFILHQIDEEESK 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+KL KV + + +PYI T DG +Y +P I N+T+K+ L+ + D++ F G I
Sbjct: 121 YKLAKVLNKKTMYNNVPYIFTNDGACFKYCNPAIDINNTVKICLKTRTVVDYVSFREGGI 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLP 239
V V G N GR+GIIK + +++ +D +F + ++ IG +SLP
Sbjct: 181 VYVYTGENTGRIGIIKTIKD-----KSLICEDFGSKQFEASISSLIAIGDSEDSLLISLP 235
Query: 240 KGKGIKLSIIEEA 252
+ KG++L+ +EE+
Sbjct: 236 EEKGVRLTALEES 248
>gi|414884816|tpg|DAA60830.1| TPA: hypothetical protein ZEAMMB73_165124 [Zea mays]
Length = 877
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/94 (84%), Positives = 85/94 (90%)
Query: 117 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 176
E FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE KI +FIKFD
Sbjct: 776 ETNMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETYKIKNFIKFD 835
Query: 177 VGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
VGN+VMVT RN GRVG+IKNREKHKGSFETIH+
Sbjct: 836 VGNMVMVTSRRNTGRVGVIKNREKHKGSFETIHV 869
>gi|457682|dbj|BAA04961.1| SS620 [Oryza sativa]
Length = 90
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 85/88 (96%)
Query: 53 KYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLH 112
KYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL
Sbjct: 1 KYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQ 60
Query: 113 SLRDEEAKFKLCKVRSVQFGQKGIPYIN 140
S++DE+AKFKLCKVRSVQFGQKGI Y+N
Sbjct: 61 SVKDEDAKFKLCKVRSVQFGQKGIRYLN 88
>gi|300174360|gb|ADJ68148.1| putative RpS4 protein [Cecidostiba fungosa]
Length = 119
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/119 (66%), Positives = 95/119 (79%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYP 60
Query: 84 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 142
AGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP++ T+
Sbjct: 61 AGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTH 119
>gi|413936191|gb|AFW70742.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 210
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 81/90 (90%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP IKANDTIK+DLE NKI DF KFDV N+
Sbjct: 83 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPFIKANDTIKIDLETNKIMDFFKFDVSNV 142
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
VMVTGGRN GRVG+IKN EKHKGSFE I +
Sbjct: 143 VMVTGGRNTGRVGVIKNWEKHKGSFEVIDV 172
>gi|413935851|gb|AFW70402.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 166
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/92 (84%), Positives = 83/92 (90%)
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
A F LCKVRSVQFGQKGIP +NTYD RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVG
Sbjct: 67 AFFMLCKVRSVQFGQKGIPCLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVG 126
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
N+VMV GRN GRVG+IKNREKHKGSFETIH+
Sbjct: 127 NVVMVISGRNTGRVGVIKNREKHKGSFETIHV 158
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAF 27
MARGLKKHLKRLNAPKHWMLDKLGGAF
Sbjct: 42 MARGLKKHLKRLNAPKHWMLDKLGGAF 68
>gi|401878898|gb|AFQ30741.1| putative RpS4, partial [Hobbya stenonota]
gi|401878900|gb|AFQ30742.1| putative RpS4, partial [Hobbya stenonota]
gi|401878902|gb|AFQ30743.1| putative RpS4, partial [Hobbya stenonota]
Length = 114
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 91/114 (79%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYP 60
Query: 84 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIP 137
AGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP
Sbjct: 61 AGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIP 114
>gi|269861121|ref|XP_002650275.1| SSU ribosomal protein S4E [Enterocytozoon bieneusi H348]
gi|220066289|gb|EED43777.1| SSU ribosomal protein S4E [Enterocytozoon bieneusi H348]
Length = 270
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 139/259 (53%), Gaps = 7/259 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M G +HLK+L AP+ W L+K G +A +P GP+ +P+ +L N L A T +E
Sbjct: 1 MPSGGHRHLKKLAAPRKWGLNKSNGKYAVRPLPGPYNKELSIPIHYILSNFLNVAHTAKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
+ I+ VLV+ + + G DV+SI KTNE++RL+ +F+L + +EA+
Sbjct: 61 IHYIIKNEMVLVNNRKLLNHKSVVGLFDVISIKKTNEHYRLILGINRKFKLQKISSDEAR 120
Query: 121 FKLCKVRS-------VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFI 173
F+L KV S + + +P T G RY +P I+ NDT+K+D+ ENKI +
Sbjct: 121 FRLTKVTSKSTDKLIIDGVETNVPMTRTLCGYNFRYANPEIEVNDTVKIDIVENKILEHY 180
Query: 174 KFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSK 233
KF+ G IV + G N GRVG IK+ E I + D + F T L + IGK
Sbjct: 181 KFETGAIVFIYSGSNIGRVGTIKSIESQTNKKILIELVDGNMNHFTTLLSSAMVIGKDDS 240
Query: 234 PWVSLPKGKGIKLSIIEEA 252
++L + KGIKL+ E++
Sbjct: 241 TLITLDESKGIKLTEYEKS 259
>gi|414878754|tpg|DAA55885.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 325
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 86/103 (83%)
Query: 108 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 167
+ + S E FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DL+ N
Sbjct: 215 QITMDSASVETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLQTN 274
Query: 168 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
KI DFIKFDV N+VMVTGGRN RVG+IKNREKHKGSFETIH+
Sbjct: 275 KIMDFIKFDVDNMVMVTGGRNTRRVGVIKNREKHKGSFETIHV 317
>gi|414867192|tpg|DAA45749.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 528
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 82/96 (85%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCK+RSVQFGQKGIPY+NTYDG TI YPDPLIKANDTIK+DLE NKI DF KFDV N+
Sbjct: 209 FKLCKMRSVQFGQKGIPYLNTYDGCTILYPDPLIKANDTIKIDLETNKIMDFFKFDVSNV 268
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGH 216
VMVTGGRN GRVG+IKN EKHKGSFE + DA H
Sbjct: 269 VMVTGGRNTGRVGVIKNWEKHKGSFEQLAGPDAAQH 304
>gi|219881153|gb|ACL51779.1| putative ribosomal protein S4 [Pinus lambertiana]
gi|219881159|gb|ACL51782.1| putative ribosomal protein S4 [Pinus strobiformis]
Length = 86
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/86 (88%), Positives = 81/86 (94%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREV
Sbjct: 1 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLLRNRLKYALTYREV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFM 87
IAI+MQR + VDGKVRTDK YPAGFM
Sbjct: 61 IAIVMQRLISVDGKVRTDKCYPAGFM 86
>gi|310771952|emb|CBH28913.1| 40S RIBOSOMAL PROTEIN S4 [Anncaliia algerae]
Length = 171
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 120/169 (71%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M++G++KHLKRL+APK W LDK GG +AP P+ G H RE +PL ++LR LK A + +E
Sbjct: 1 MSKGIRKHLKRLHAPKSWRLDKTGGKYAPMPTVGSHPRRESIPLSILLRRYLKVAPSMKE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
++ +L ++ +LV+G VRTD TYP G MDV++I TNE++R++YD +F LH + EE+
Sbjct: 61 LVYVLGKKIILVNGVVRTDTTYPLGIMDVLTIQSTNEHYRVMYDVFKKFVLHKIDAEESN 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKI 169
K+CKV + +K +PYI T DG + RY DP IK ND++ +D++E K+
Sbjct: 121 IKVCKVIKKKICKKNVPYIYTADGYSFRYCDPKIKTNDSLIVDIKEMKV 169
>gi|413921922|gb|AFW61854.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 184
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 81/91 (89%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
KLCKVRSVQFGQKGIPY+NTY+GRTIRYPDPLIKANDTIK+DLE NKI DF KFD+GN+
Sbjct: 87 LKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDPLIKANDTIKIDLENNKIMDFFKFDIGNV 146
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQ 211
VMVTGGRN VG+IKN EKHKGSFE I +Q
Sbjct: 147 VMVTGGRNTRCVGVIKNWEKHKGSFEVIDVQ 177
>gi|215809414|gb|ACJ70414.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809416|gb|ACJ70415.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809418|gb|ACJ70416.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809420|gb|ACJ70417.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809422|gb|ACJ70418.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809424|gb|ACJ70419.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809426|gb|ACJ70420.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809428|gb|ACJ70421.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809430|gb|ACJ70422.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809432|gb|ACJ70423.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809434|gb|ACJ70424.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809436|gb|ACJ70425.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809438|gb|ACJ70426.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809440|gb|ACJ70427.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809442|gb|ACJ70428.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809445|gb|ACJ70429.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809447|gb|ACJ70430.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809451|gb|ACJ70432.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809453|gb|ACJ70433.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809455|gb|ACJ70434.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809457|gb|ACJ70435.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809459|gb|ACJ70436.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809461|gb|ACJ70437.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809463|gb|ACJ70438.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809465|gb|ACJ70439.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809467|gb|ACJ70440.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809469|gb|ACJ70441.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809471|gb|ACJ70442.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809473|gb|ACJ70443.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809475|gb|ACJ70444.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809477|gb|ACJ70445.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|219881155|gb|ACL51780.1| putative ribosomal protein S4 [Pinus nigra]
gi|219881157|gb|ACL51781.1| putative ribosomal protein S4 [Pinus pinaster]
gi|219881161|gb|ACL51783.1| putative ribosomal protein S4 [Pinus resinosa]
Length = 86
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/86 (87%), Positives = 81/86 (94%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREV
Sbjct: 1 ARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLLRNRLKYALTYREV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFM 87
IAI+MQR + VDGKVRTDK YPAGFM
Sbjct: 61 IAIVMQRLISVDGKVRTDKCYPAGFM 86
>gi|215809449|gb|ACJ70431.1| putative ribosomal protein S4 [Pinus sylvestris]
Length = 86
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/86 (86%), Positives = 81/86 (94%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL++++RNRLKYALTYREV
Sbjct: 1 ARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYREV 60
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFM 87
IAI+MQR + VDGKVRTDK YPAGFM
Sbjct: 61 IAIVMQRLISVDGKVRTDKCYPAGFM 86
>gi|124028167|ref|YP_001013487.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
gi|189045349|sp|A2BMD1.1|RS4E_HYPBU RecName: Full=30S ribosomal protein S4e
gi|123978861|gb|ABM81142.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
Length = 255
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 140/252 (55%), Gaps = 11/252 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G ++HLK L APK W + + G F KPS GPH +PL++++R+ L YA T R
Sbjct: 1 MARMGGRRHLKTLAAPKFWPVRQRAGIFTVKPSPGPHPIERSIPLLILVRDVLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E ++ + H +DG+VR + YP GFMDV+ I T E +R+L F LH + EEA
Sbjct: 61 EARKLIAEGHFKIDGRVRRNYKYPVGFMDVIEIVDTGEFYRVLPYPTRFFTLHPISKEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPL-------IKANDTIKLDLEENKIT 170
+FKL ++ + G ++ +DGR IR DP K T+K+ + E ++
Sbjct: 121 QFKLGRIEDKSTVKGGHIQLHLHDGRNVLIRVSDPTNPVEAKPYKTLGTVKISIPEQQLL 180
Query: 171 DFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG- 229
+ +VG++V++ GGRN GRVG I + + + I+DA G + T L VF I
Sbjct: 181 GYAPLEVGSLVIIFGGRNVGRVGRIVSIQPGMRRRGIVTIEDARGEKIQTSLEYVFVIAP 240
Query: 230 KGSKPWVSLPKG 241
+PW+SLP+G
Sbjct: 241 PNEEPWISLPEG 252
>gi|414886273|tpg|DAA62287.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 287
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 82/101 (81%)
Query: 105 TKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 164
T + + S E FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DL
Sbjct: 166 TIEQITMDSASVETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDL 225
Query: 165 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 205
E NKI DFIKFDV N+VMVTGGRN RVG+IKNREKHKGSF
Sbjct: 226 ETNKIMDFIKFDVDNMVMVTGGRNTERVGVIKNREKHKGSF 266
>gi|333987666|ref|YP_004520273.1| 30S ribosomal protein S4e [Methanobacterium sp. SWAN-1]
gi|333825810|gb|AEG18472.1| 30S ribosomal protein S4e [Methanobacterium sp. SWAN-1]
Length = 242
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 139/243 (57%), Gaps = 4/243 (1%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MA+ G +KHLKR +P+HW + + KPS+GPH E LPL++++R+ LK A R
Sbjct: 1 MAKMGSRKHLKRFKSPEHWPIHPKENKWTVKPSAGPHSIEESLPLLIIVRDILKVAENSR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E I+ +LVDG+ R D +P GFMDV+ IPK+ + +R+L + KG L+ + E A
Sbjct: 61 EAKIIIGNGDILVDGRARKDYKFPVGFMDVIEIPKSEKVYRILPNHKGNLVLYPITKENA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
+FKLC++ + G +N +DGR + K+ D + +++ E +T+ IKF+ G
Sbjct: 121 EFKLCRIEDKTTIKGGKTQLNLHDGRNCLV-EKEYKSGDVVVVEVPEQTVTNHIKFESGT 179
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
I ++TGG++ G +G IK + S T+ I+ F T VF IGK KP +SL
Sbjct: 180 IGLITGGKHIGELGKIKEINVTRSSKSNTVLIETDDKKTFLTLTDYVFVIGK-DKPVISL 238
Query: 239 PKG 241
P G
Sbjct: 239 PGG 241
>gi|414886272|tpg|DAA62286.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 183
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 84/106 (79%)
Query: 105 TKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 164
T + + S E FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DL
Sbjct: 62 TIEQITMDSASVETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDL 121
Query: 165 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
E NKI DFIKFDV N+VMVTGGRN RVG+IKNREKHKGSF + +
Sbjct: 122 ETNKIMDFIKFDVDNMVMVTGGRNTERVGVIKNREKHKGSFCCLEL 167
>gi|304314266|ref|YP_003849413.1| 30S ribosomal protein S4e [Methanothermobacter marburgensis str.
Marburg]
gi|302587725|gb|ADL58100.1| 30S ribosomal protein S4e [Methanothermobacter marburgensis str.
Marburg]
Length = 242
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 133/238 (55%), Gaps = 3/238 (1%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
+KHLKR +P HW + + KPS GPH LPL++++R+ L A RE I+
Sbjct: 7 RKHLKRFRSPSHWPIHPKEYKWTVKPSPGPHAIEASLPLMIIVRDILGVADNAREARKII 66
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
VLVDG+ R + +P GFMDVVSIP+T E +R+L D +GR LH + +E A FKLCK
Sbjct: 67 NSGEVLVDGRPRKNYKFPVGFMDVVSIPRTGEVYRVLPDERGRLVLHPIGEENAGFKLCK 126
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
+ + + G +N +DGR D + D +KL + E +I + I F+ G++ +VTG
Sbjct: 127 IVNKTTIRGGKTQLNLHDGRNYLSEDEF-RVGDVVKLAVPEQEILERIPFEKGSLGLVTG 185
Query: 186 GRNRGRVGIIKNREKHKGSF-ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
GR+ G +G IK + S T I+ G F T VF IGK + +SLP GK
Sbjct: 186 GRHTGEIGRIKKINITRSSMPNTAVIETEAGKTFLTLKDYVFVIGK-DESVISLPGGK 242
>gi|194691268|gb|ACF79718.1| unknown [Zea mays]
Length = 102
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/83 (87%), Positives = 81/83 (97%)
Query: 173 IKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 232
IKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG+
Sbjct: 10 IKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGN 69
Query: 233 KPWVSLPKGKGIKLSIIEEARKR 255
KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 70 KPWVSLPKGKGIKLSIIEEQRKR 92
>gi|325958544|ref|YP_004290010.1| 30S ribosomal protein S4e [Methanobacterium sp. AL-21]
gi|325329976|gb|ADZ09038.1| 30S ribosomal protein S4e [Methanobacterium sp. AL-21]
Length = 241
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 139/244 (56%), Gaps = 5/244 (2%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MA+ G +KHLKR +P HW + + KPS+GPH E LPL++V+R+ LK A R
Sbjct: 1 MAKMGSRKHLKRYKSPAHWPIHPKEDKWTVKPSAGPHAIEESLPLLIVVRDILKVADNSR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E I+ +LVDG+ R D YP GFMDV+ +PK+ + +R+L D KGR LH + ++
Sbjct: 61 EAKIIINNGDILVDGRARKDYKYPVGFMDVIELPKSEKVYRVLPDHKGRLILHPISEKNR 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
+FKLC+V + G +N +DGR + D + +++ E K+TD IKF+ G
Sbjct: 121 EFKLCRVTDKTIIKGGKTQLNLHDGRNCIV-EKQYSTGDVVVVEIPEQKVTDHIKFESGT 179
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
+ ++ GG++ G +G +K + S T+ ++ G F T VF +GK +P +SL
Sbjct: 180 VGLIIGGKHIGELGKVKQINITQSSKPNTVEVETDEGI-FLTLADYVFVLGK-EEPVISL 237
Query: 239 PKGK 242
P GK
Sbjct: 238 PGGK 241
>gi|15678046|ref|NP_275160.1| 30S ribosomal protein S4 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3914912|sp|O26123.1|RS4E_METTH RecName: Full=30S ribosomal protein S4e
gi|2621043|gb|AAB84516.1| ribosomal protein S4 [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 242
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 3/238 (1%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
+KHLKR +P HW + + KPS GPH LPL++++R+ LK A RE I+
Sbjct: 7 RKHLKRFKSPVHWPIHPKEYKWTVKPSPGPHAIENSLPLMIIVRDILKVADNAREARKII 66
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
VLVDG+ R + +P GFMDVVSIP+T + +R+L D +GR LH + +E A FKLCK
Sbjct: 67 NSGEVLVDGRPRKNYKFPVGFMDVVSIPRTGDVYRVLPDERGRLVLHPIDEENAGFKLCK 126
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
+ + + G +N +DGR D + D +KL + E +I + I F+ ++ +VTG
Sbjct: 127 IVNKTTIKGGRTQLNLHDGRNYLSDDEF-RVGDVVKLSIPEQEILERIPFEKDSLGLVTG 185
Query: 186 GRNRGRVGIIKNREKHKGSF-ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 242
GR+ G +G IK + S T I+ G F T VF IGK + +SLP GK
Sbjct: 186 GRHTGEIGKIKKINITRSSMPNTAVIETGAGKTFLTLKDYVFVIGK-DESVISLPGGK 242
>gi|413943350|gb|AFW75999.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 336
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 77/90 (85%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGI Y+NTYDGRTIRYPD LIKANDTIK+DLE NKI DF KFDV N+
Sbjct: 227 FKLCKVRSVQFGQKGISYLNTYDGRTIRYPDLLIKANDTIKIDLETNKIMDFFKFDVSNV 286
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
MVTGGRN RVG+IKN EKHK SFE I +
Sbjct: 287 FMVTGGRNTRRVGVIKNWEKHKASFEVIDV 316
>gi|296109308|ref|YP_003616257.1| ribosomal protein S4E, central domain protein [methanocaldococcus
infernus ME]
gi|295434122|gb|ADG13293.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
infernus ME]
Length = 245
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 137/244 (56%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G K+HLKRL AP W L + F +P G H E LPL+L++R+ LKYA +E
Sbjct: 4 KGPKRHLKRLAAPVRWELPRKTHKFTVRPLPGAHPMSESLPLLLIVRDVLKYADNRKEAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ +LVDG+VR ++ P GFMDVVS+P+ NEN+R+L+D KGR +L+ E K
Sbjct: 64 KIIKMGKILVDGRVRKEEKLPVGFMDVVSLPEANENYRVLFDRKGRVKLYPT--ENPDVK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLEENKITDFIK 174
LCK+++ + G +N +DGR I+ DP + K DT+ + + + +I D I
Sbjct: 122 LCKIKNKTVVKGGHIQLNLHDGRNIIIKVSDPTKAEEDVYKTGDTLLISIPDQEIKDHIP 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F+VG + +TGG++ G + I + EK + ++ G +F T VF IG KP
Sbjct: 182 FEVGKLAYITGGKHVGEIAKIVDIEKKPLHKTVVTLETPDGEKFKTVKDYVFVIG-DEKP 240
Query: 235 WVSL 238
+ L
Sbjct: 241 VIKL 244
>gi|242398292|ref|YP_002993716.1| 30S ribosomal protein S4e [Thermococcus sibiricus MM 739]
gi|242264685|gb|ACS89367.1| 30S ribosomal protein S4e [Thermococcus sibiricus MM 739]
Length = 248
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 142/250 (56%), Gaps = 13/250 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +PS GPH R +PLI ++R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPTQWYIERKVFKWAVRPSPGPHDMRTSIPLIYIIRDYLGYAKTGR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
EV +L + VLVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA
Sbjct: 61 EVRKVLNEEKVLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPITEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGR---------TIRYPDPLIKANDTIKLDLEENKIT 170
K K ++ + + + G +N +DG T D + DT+ + + E +I
Sbjct: 121 KLKPLRISNKRMVKGGNLQLNFHDGTNHLVKLSSLTDETKDSF-RTADTVLVKVPEREIV 179
Query: 171 DFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 229
+ + F+VG V V G+N RVG I++ R G + + I+D G F T F +G
Sbjct: 180 EVVPFEVGAFVFVVQGKNVARVGKIVEVRHFPGGWPDVVTIEDRDGELFDTLKDYAFVLG 239
Query: 230 KGSKPWVSLP 239
K +P +SLP
Sbjct: 240 K-EEPRISLP 248
>gi|312137088|ref|YP_004004425.1| 30S ribosomal protein S4e [Methanothermus fervidus DSM 2088]
gi|311224807|gb|ADP77663.1| SSU ribosomal protein S4E [Methanothermus fervidus DSM 2088]
Length = 240
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 143/243 (58%), Gaps = 5/243 (2%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G ++HLKRL +P+HW + + + KPS GPH + E LPL++++R+ L A T R
Sbjct: 1 MARMGSRRHLKRLKSPRHWPIPRKEKKWTVKPSPGPHSADESLPLLIIIRDVLGLADTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E I+ +LVDG+ R D +P GFMD++ IPK ++++R+L D KGR LH ++EE
Sbjct: 61 EAKRIIHHGEILVDGRPRKDHKFPVGFMDLLEIPKIDKSYRVLIDKKGRLYLHETKEEE- 119
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
++KLCK+ + + G +N +DGR D K D IKL + + +I D I+F GN
Sbjct: 120 RYKLCKILNKTTVKGGKIQLNLHDGRN-HLVDNDFKTGDVIKLRIPDQEILDKIEFKEGN 178
Query: 180 IVMVTGGRNRGRVGIIKNREKHKG-SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
+ +TGG++ G + ++ K + T+ ++ G F T VF IG+ +P + L
Sbjct: 179 LAFITGGKHVGEIARVEKINIIKAPTPNTVILKSRDGKMFETIHEYVFMIGE-KEPVIPL 237
Query: 239 PKG 241
P+G
Sbjct: 238 PEG 240
>gi|118431012|ref|NP_147175.2| 30S ribosomal protein S4 [Aeropyrum pernix K1]
gi|17380578|sp|Q9YF85.2|RS4E_AERPE RecName: Full=30S ribosomal protein S4e
gi|116062338|dbj|BAA79311.2| 30S ribosomal protein S4e [Aeropyrum pernix K1]
Length = 253
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 142/251 (56%), Gaps = 11/251 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G ++ LK L AP+ W + + +A KP GPH + + LPL+L++RN L YA T R
Sbjct: 1 MARMGGQRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E ++ + H VDG VR D +P GFMDV+ + T E FR+L F+LH + +EE
Sbjct: 61 EARKLISEGHFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVKFFKLHPIPEEEG 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTI--RYPDP------LIKANDTIKLDLEENKITD 171
K ++ + + G +N +DGR I R DP + + DT+ + + +I
Sbjct: 121 DLKPVRIENKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKG 180
Query: 172 FIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGK 230
IKF G I ++ GGRN GRVG++K+ +K G T + ++DA G+ F T L VF IG
Sbjct: 181 HIKFGEGAIAIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL 240
Query: 231 GSKPWVSLPKG 241
+P +SLP+G
Sbjct: 241 -DRPVISLPEG 250
>gi|223477731|ref|YP_002582376.1| 30S ribosomal protein S4e [Thermococcus sp. AM4]
gi|214032957|gb|EEB73785.1| SSU ribosomal protein S4e [Thermococcus sp. AM4]
Length = 243
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 141/245 (57%), Gaps = 8/245 (3%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W + + +A +PS GPH + +PL+ ++R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPTSWYIHRKAYKWAVRPSPGPHNMQTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + +LVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLEENKITDFIKF 175
K K ++ + + + +N +DG ++ D K + TI + + E +I + I F
Sbjct: 121 KLKPFRINNKRMVKGAKVQLNLHDGSNHLVSLAEKDSF-KTSYTIIMKVPEREIVEVIPF 179
Query: 176 DVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
+VG V VT G+N R G I++ R G + + I+D G +F T F +GK KP
Sbjct: 180 EVGAYVFVTQGKNVARKGRIVEVRHFPMGWPDVVTIEDESGEKFDTLKEYAFVVGK-EKP 238
Query: 235 WVSLP 239
+SLP
Sbjct: 239 EISLP 243
>gi|27363136|gb|AAO11521.1| 40S ribosomal protein S4 [Azumapecten farreri]
Length = 105
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 85/105 (80%)
Query: 72 VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 131
VDGKVRT K YPAGFMDV++I KTNENFRLLYD KGRF +H ++ EEAK+KLC+V+SV
Sbjct: 1 VDGKVRTAKDYPAGFMDVIAIEKTNENFRLLYDVKGRFTVHRIKPEEAKYKLCRVKSVTV 60
Query: 132 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 176
G KG+P + T+D RTIRYPDPL K NDT+ +D+ K+ +FIKFD
Sbjct: 61 GAKGVPMLTTHDARTIRYPDPLAKVNDTVMVDIATGKMKEFIKFD 105
>gi|315229869|ref|YP_004070305.1| 30S ribosomal protein S4e [Thermococcus barophilus MP]
gi|315182897|gb|ADT83082.1| SSU ribosomal protein S4e [Thermococcus barophilus MP]
Length = 248
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 139/250 (55%), Gaps = 13/250 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH R +PL+ ++R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPTQWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + +LVDGK R D +P G MDVVSIP+T E++R+L + G+ LH + +EEA
Sbjct: 61 EARKILNEGKILVDGKARKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KFK--------LCKVRSVQFG-QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKIT 170
K K + K ++Q G G Y+ T D K + T+ + + E +IT
Sbjct: 121 KIKPLRITRKVMVKGGNLQIGFHDGTNYLVKLSSLTDEVKDRF-KTSYTVFMKMPEREIT 179
Query: 171 DFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 229
+ + F++G V VT G+N R+G I++ R G + + I+D G F T F IG
Sbjct: 180 EILPFEIGAYVFVTQGKNVARIGKIVEVRHFPAGWPDVVTIEDQEGELFDTLKEYAFVIG 239
Query: 230 KGSKPWVSLP 239
K KP +SLP
Sbjct: 240 K-DKPGISLP 248
>gi|126465928|ref|YP_001041037.1| 30S ribosomal protein S4 [Staphylothermus marinus F1]
gi|189045360|sp|A3DNB9.1|RS4E_STAMF RecName: Full=30S ribosomal protein S4e
gi|126014751|gb|ABN70129.1| SSU ribosomal protein S4E [Staphylothermus marinus F1]
Length = 252
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 142/253 (56%), Gaps = 15/253 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G KKHLK L APK W + + +A KPS GPH C PL++++R+ L YA T R
Sbjct: 1 MARMGGKKHLKALVAPKFWPILRKEYKWAVKPSPGPHPIERCFPLLIIVRDILGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E ++ + H VDG+VR + YP G MDV+ I T E +R++ L + EEA
Sbjct: 61 EARKLISEGHFKVDGRVRKNYKYPVGLMDVIEIVDTGETYRVIPVPVKVLGLIEIDKEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLEENKITD 171
K+KL ++ + + G +N +DGR I+ DP + K T+++ + E +I +
Sbjct: 121 KYKLSRIENKTTVKGGHIQLNLHDGRNVLIKVSDPKNPVEDIYKTLGTLQISIPEQQILN 180
Query: 172 FIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG---SFETIHIQDALGHEFATRLGNVFTI 228
+I D G +V+++GGRN GRVG K HKG + I+D G++F T L VF I
Sbjct: 181 YIPLDEGTLVIISGGRNVGRVG--KVVSIHKGIRRHRSIVTIEDKHGNKFQTSLTYVFPI 238
Query: 229 GKGSKPWVSLPKG 241
GK +P + LP+G
Sbjct: 239 GK-EEPLIKLPEG 250
>gi|375083281|ref|ZP_09730307.1| 30S ribosomal protein S4e [Thermococcus litoralis DSM 5473]
gi|374742012|gb|EHR78424.1| 30S ribosomal protein S4e [Thermococcus litoralis DSM 5473]
Length = 248
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 141/250 (56%), Gaps = 13/250 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +PS GPH + +PLI ++R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPTQWYIERKTYKWAVRPSPGPHNMKTSIPLIYIIRDYLGYAKTGR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + VLVDG+VR D +P G MDVVSIP+T E++R+ + G+ LH + +EEA
Sbjct: 61 EARKILNEGKVLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVFPNRIGKLILHPISEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGR---------TIRYPDPLIKANDTIKLDLEENKIT 170
K K ++ + + + G +N +DG T D K +DT+ + + E +I
Sbjct: 121 KIKPLRINNKRMVKGGNLQLNFHDGTNHLIKLSSLTDETKDQF-KTSDTVLMKVPEREIV 179
Query: 171 DFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 229
+ + F++G V V G+N RVG I++ R G + + I+D G F T F +G
Sbjct: 180 EVLSFEIGAYVFVVQGKNVARVGKIVEVRHFPGGWPDVVTIEDKEGELFDTLKDYAFVLG 239
Query: 230 KGSKPWVSLP 239
K +P +SLP
Sbjct: 240 K-EEPKISLP 248
>gi|333910781|ref|YP_004484514.1| 30S ribosomal protein S4 [Methanotorris igneus Kol 5]
gi|333751370|gb|AEF96449.1| 30S ribosomal protein S4e [Methanotorris igneus Kol 5]
Length = 244
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 134/244 (54%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G ++HLKRL AP +W + + F +P GPH E LPL+L++R+ LKYA RE
Sbjct: 4 KGPRRHLKRLAAPANWQIPRKVHKFVVRPLPGPHAMNESLPLLLIVRDILKYADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ +LVDG+ R + +P G MDVVSIP TNE+FR L+D KGR L E K
Sbjct: 64 KIIKMGKILVDGRKRKEHKFPVGLMDVVSIPDTNEHFRALFDEKGRIVLRPT--ENPDVK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLEENKITDFIK 174
LC++R+ + G +N +DGR IR DP + K D I + + E +I I
Sbjct: 122 LCRIRNKTVVKGGHIQLNLHDGRNHLIRVSDPTKAEEDVYKTGDVILMGIPEQEIKAHIP 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F+VG + +TGG++ G I + EK + I +++A G +F T VF +G +P
Sbjct: 182 FEVGKLAYITGGKHIGEFAKIVDIEKRILYPDIITLENADGEKFKTIKDYVFVVG-DEEP 240
Query: 235 WVSL 238
+ L
Sbjct: 241 IIKL 244
>gi|390986591|gb|AFM35815.1| hypothetical protein, partial [Oryza eichingeri]
Length = 77
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/77 (92%), Positives = 75/77 (97%)
Query: 28 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 87
APKPSSGPHK+RECLPLIL+LRNRLKYALTYRE I+ILMQRHV+VDGKVRTDKTYPAGFM
Sbjct: 1 APKPSSGPHKARECLPLILILRNRLKYALTYREGISILMQRHVMVDGKVRTDKTYPAGFM 60
Query: 88 DVVSIPKTNENFRLLYD 104
DVVSIPKT ENFRLLYD
Sbjct: 61 DVVSIPKTGENFRLLYD 77
>gi|57641464|ref|YP_183942.1| 30S ribosomal protein S4e [Thermococcus kodakarensis KOD1]
gi|73919021|sp|Q5JJG0.1|RS4E_PYRKO RecName: Full=30S ribosomal protein S4e
gi|57159788|dbj|BAD85718.1| SSU ribosomal protein S4E [Thermococcus kodakarensis KOD1]
Length = 243
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 140/245 (57%), Gaps = 8/245 (3%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W + + +A +PS GPH + +PLI ++R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPTSWYIHRKAYKWAVRPSPGPHSMKTSIPLIYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + +LVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLEENKITDFIKF 175
K K ++ + + + +N +DG ++ D K + T+ + + E +I + F
Sbjct: 121 KLKPFRINNKRMVKGAKVQLNLHDGSNHLVSLAEKDAY-KTSYTVIMQVPERQIVKVLPF 179
Query: 176 DVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
+VG V VT G+N R G I++ R+ G + + I+D G F T F IGK KP
Sbjct: 180 EVGAYVFVTQGKNVARKGKIVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFVIGK-DKP 238
Query: 235 WVSLP 239
+SLP
Sbjct: 239 EISLP 243
>gi|408381909|ref|ZP_11179456.1| 30S ribosomal protein S4e [Methanobacterium formicicum DSM 3637]
gi|407815357|gb|EKF85942.1| 30S ribosomal protein S4e [Methanobacterium formicicum DSM 3637]
Length = 241
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 134/243 (55%), Gaps = 3/243 (1%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MA+ G +KHLKR AP+HW + + KPS GPH LPL++++R+ LK A R
Sbjct: 1 MAKMGSRKHLKRFKAPEHWPIHPKEFTWTVKPSPGPHSIEGSLPLLVIVRDILKIADNAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E I+ VLVDG+ R D +P GFMDV+ +PK+ + +R++ D KG LH + + +
Sbjct: 61 EARIIINTGEVLVDGRARKDYKFPVGFMDVIQLPKSGKAYRVVPDEKGELVLHPIEEGDT 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
+FKLC++ + G +N +DGR + K D + L++ + +I D IKF+ G
Sbjct: 121 QFKLCRIEDKVTIKGGKTQLNLHDGRNYLTEEDY-KTGDVVLLNVPDQEIKDTIKFEDGA 179
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
I ++TGG++ G G +K + S + + F T VF +GK KP +SLP
Sbjct: 180 IGLITGGKHIGEKGTVKEINITRSSMPNTVLIETDETTFQTLQEYVFVLGK-DKPVISLP 238
Query: 240 KGK 242
G+
Sbjct: 239 GGQ 241
>gi|414869427|tpg|DAA47984.1| TPA: hypothetical protein ZEAMMB73_281063 [Zea mays]
Length = 282
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 80/86 (93%)
Query: 166 ENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNV 225
EN+ IKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH++D++GH+FAT +GNV
Sbjct: 197 ENQNHGLIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSMGHQFATCMGNV 256
Query: 226 FTIGKGSKPWVSLPKGKGIKLSIIEE 251
FTIGKG+KPWVSLPKG+GIKLSIIEE
Sbjct: 257 FTIGKGNKPWVSLPKGRGIKLSIIEE 282
>gi|337283657|ref|YP_004623131.1| 30S ribosomal protein S4e [Pyrococcus yayanosii CH1]
gi|334899591|gb|AEH23859.1| 30S ribosomal protein S4e [Pyrococcus yayanosii CH1]
Length = 248
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 141/249 (56%), Gaps = 11/249 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH + +PL+ ++R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHSMKTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + +LVDGKVR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA
Sbjct: 61 EARKILNEGKILVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDG-----RTIRYPDPL---IKANDTIKLDLEENKITD 171
K K ++R+ + + G +N +DG R D +DT+ + + E +I +
Sbjct: 121 KIKPFRIRNKRMVKGGNLQLNLHDGSNHLIRLSSLTDETKDRYHTSDTLIMRVPEREIIE 180
Query: 172 FIKFDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 230
+ F+VG V VT G+N R G I++ R G + + I+D G F T F +GK
Sbjct: 181 VLPFEVGAYVFVTQGKNVARKGRIVEIRHFPMGWPDVVTIEDEEGELFDTLKEYAFVVGK 240
Query: 231 GSKPWVSLP 239
S P +SLP
Sbjct: 241 DS-PRISLP 248
>gi|288560121|ref|YP_003423607.1| ribosomal protein S4e Rps4e [Methanobrevibacter ruminantium M1]
gi|288542831|gb|ADC46715.1| ribosomal protein S4e Rps4e [Methanobrevibacter ruminantium M1]
Length = 244
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 137/240 (57%), Gaps = 3/240 (1%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MA+ G +KHLKR NAPK W + + KP+ G H + LPL++++R+ L A R
Sbjct: 1 MAKMGSRKHLKRYNAPKTWPIHPKEDTWTVKPAPGTHAINDSLPLLVIIRDILGIADNSR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E ++ +VL+DG+ + D +P GFMD++SIPKT EN+R+L DTKGR LH + E+A
Sbjct: 61 EAKRLINTGNVLIDGRAKKDYKFPVGFMDILSIPKTGENYRILLDTKGRLTLHPISAEDA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
+FKL K+ + + G +N +DGR + + A D + L++ E +I + +F
Sbjct: 121 EFKLAKIVNKSTIKGGKTQLNLHDGRNVIVEEDNYSAYDVVCLNIPEQEIKENFEFGEDV 180
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
+V+VTGG++ G +G I+ + S T+ I+ A F T F IGK +P + L
Sbjct: 181 VVLVTGGKHTGELGKIQEVIVDQSSKANTVIIEKANKDTFLTLKDYAFVIGK-DEPAIDL 239
>gi|389860661|ref|YP_006362901.1| 30S ribosomal protein S4e [Thermogladius cellulolyticus 1633]
gi|388525565|gb|AFK50763.1| 30S ribosomal protein S4e [Thermogladius cellulolyticus 1633]
Length = 250
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 138/244 (56%), Gaps = 10/244 (4%)
Query: 7 KHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
+HLK L AP +W + + + +PS GPH + LPL++V+RN L YA T RE ++
Sbjct: 5 RHLKALAAPYYWPILRKEYKWTVRPSPGPHPTEYSLPLLIVVRNVLGYAETAREARRLIS 64
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+ H +DG+V D +P GFMDV+ I T+E +R++ + EEA FKLC++
Sbjct: 65 EGHFEIDGRVVRDYKFPVGFMDVLRIKPTDEYYRVVPVPTKVIGFVKIPKEEAAFKLCRI 124
Query: 127 RSVQFGQKGIPYINTYDGRT--IRYPDPLIKAND------TIKLDLEENKITDFIKFDVG 178
++ + G +N +DGR IR DP D T++L L +NKI D++
Sbjct: 125 QNKTTVKGGHIQLNLHDGRNVLIRVNDPRNPVEDVYETLGTVQLSLADNKIVDYVPLAEN 184
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIH-IQDALGHEFATRLGNVFTIGKGSKPWVS 237
N+V+++GGRN GRVG++K + G ++ I+D G+ F T L VF IG+ KP ++
Sbjct: 185 NLVIISGGRNVGRVGLLKKVHRGMGVKRSVAVIEDKNGNLFQTSLSYVFVIGR-DKPLIT 243
Query: 238 LPKG 241
LP+
Sbjct: 244 LPEA 247
>gi|240104047|ref|YP_002960356.1| 30S ribosomal protein S4e [Thermococcus gammatolerans EJ3]
gi|239911601|gb|ACS34492.1| SSU ribosomal protein S4E (rps4E) [Thermococcus gammatolerans EJ3]
Length = 243
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 140/245 (57%), Gaps = 8/245 (3%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W + + +A +P GPH + +PLI ++R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPTSWYIHRKEYKWAVRPRPGPHSMQTSIPLIYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + +LVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLEENKITDFIKF 175
K K ++ + + + +N +DG ++ D + + TI + + E +I + I F
Sbjct: 121 KLKPFRINNKRMVKGARVQLNLHDGSNHLVSLAEKDSF-RTSYTIIMKVPEREIIEVIPF 179
Query: 176 DVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
+VG V VT G+N R G I++ R G + + I+D G +F T F +GK KP
Sbjct: 180 EVGAYVFVTQGKNVARKGRIVEVRHFPMGWPDVVTIEDESGEKFDTLKEYAFVVGK-EKP 238
Query: 235 WVSLP 239
+SLP
Sbjct: 239 EISLP 243
>gi|297527395|ref|YP_003669419.1| 30S ribosomal protein S4E, central domain-containing protein
[Staphylothermus hellenicus DSM 12710]
gi|297256311|gb|ADI32520.1| Ribosomal protein S4E, central domain protein [Staphylothermus
hellenicus DSM 12710]
Length = 252
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 143/253 (56%), Gaps = 15/253 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G KKHLK L AP+ W + + +A KPS GPH + C PL++V+R+ L YA T R
Sbjct: 1 MARMGGKKHLKALAAPRFWPILRKEYKWAVKPSPGPHPTERCFPLLIVVRDILGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E ++ + H VDG++R + YP G MDV+ I T + +R++ L + EEA
Sbjct: 61 EARKLISEGHFKVDGRIRKNYKYPVGLMDVIEIVDTGQTYRVIPVPVKVLGLIEIDKEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLEENKITD 171
K+KL ++ + + G +N +DGR I+ DP + K T+++ + E +I +
Sbjct: 121 KYKLSRIENKTTVKGGHIQLNLHDGRNVLIKVGDPKNPVEDIYKTLGTLQITIPEQQILN 180
Query: 172 FIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG---SFETIHIQDALGHEFATRLGNVFTI 228
+I + G +V+++GGRN GRVG K HKG + I+D G++F T L VF I
Sbjct: 181 YIPLEEGMLVIISGGRNVGRVG--KVVSIHKGIRRHRSIVTIEDKHGNKFQTSLTYVFPI 238
Query: 229 GKGSKPWVSLPKG 241
GK +P + LP+G
Sbjct: 239 GK-EEPLIKLPEG 250
>gi|84489695|ref|YP_447927.1| 30S ribosomal protein S4e [Methanosphaera stadtmanae DSM 3091]
gi|121729294|sp|Q2NFW9.1|RS4E_METST RecName: Full=30S ribosomal protein S4e
gi|84373014|gb|ABC57284.1| 30S ribosomal protein S4e [Methanosphaera stadtmanae DSM 3091]
Length = 241
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 2/235 (0%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIA 63
G +KHLKR APK W + K + K S+GPH E +PL++VLR+ L A RE
Sbjct: 5 GSRKHLKRFKAPKMWPIHKKEEVWTTKTSAGPHALEESIPLVMVLRDILGLAANSREAKI 64
Query: 64 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 123
IL VLVDG R + +P GFMDV+SIPK N+ FR+L D KGR L + ++++ FKL
Sbjct: 65 ILNNSDVLVDGIPRKNHRFPVGFMDVISIPKINKTFRVLQDYKGRLVLKEIEEKDSTFKL 124
Query: 124 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ + G +N GR I D K D + L++ E KI+D IKF+ G + ++
Sbjct: 125 VKILGKTTIKGGKTQLNLEGGRNIIADDDY-KTGDVLLLNIPEQKISDSIKFEEGALGLI 183
Query: 184 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
TGG++ VG I + + S + + F T VF +G+ KP +SL
Sbjct: 184 TGGKHISEVGKIDEIKITQSSKSNTVLMETEEGSFLTLARYVFVVGQ-DKPVISL 237
>gi|429963313|gb|ELA42857.1| hypothetical protein VICG_00172 [Vittaforma corneae ATCC 50505]
Length = 255
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 127/233 (54%), Gaps = 1/233 (0%)
Query: 27 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 86
+A +P GPH +PL V+ L+ A T +EV I R + V+GK T +P G
Sbjct: 16 YAIRPLPGPHSKELSIPLKYVIARFLRVANTAKEVDYIASSRMIAVNGKEITSIKFPVGL 75
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 146
DVV+I KTN++FRL ++ +F+LH + +EAK ++ KV S ++ IP +T DG
Sbjct: 76 FDVVTILKTNQHFRLYFNANRKFKLHKISSDEAKVRISKVVS-KYTNDSIPMTHTKDGYN 134
Query: 147 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 206
++ DP IK NDT+K+D+ N+I + F+ G I V G N GR+G IK ++ E
Sbjct: 135 FKFADPSIKINDTVKIDIATNRIVGHLPFEAGKIGYVFSGPNAGRIGTIKYIDRSPDGKE 194
Query: 207 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 259
+QD F+ + V IG+ + +S+ + GI+L+ E + + AA
Sbjct: 195 IAFLQDPREKPFSVSMDKVMVIGESNSLLISMDENDGIRLNAFEISNNKYAAN 247
>gi|341582050|ref|YP_004762542.1| 30S ribosomal protein S4e [Thermococcus sp. 4557]
gi|340809708|gb|AEK72865.1| 30S ribosomal protein S4e [Thermococcus sp. 4557]
Length = 243
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 140/245 (57%), Gaps = 8/245 (3%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W + + +A +P GPH R +PL+ ++R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPNQWYISRKTYKWAVRPRPGPHSMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + +LVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + ++EA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEKEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLEENKITDFIKF 175
K ++ + + + +N +DG T+ D + A+ T+ + + E ++ + + F
Sbjct: 121 NIKPLRISNKRMVKGAKVQLNLHDGSNHLVTMDEKDRYMTAS-TVLMKVPEREVIEVLPF 179
Query: 176 DVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
+VG V VT G+N R G +++ R+ G + + I+D G F T F +GK KP
Sbjct: 180 EVGAYVFVTQGKNVARKGKVVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFVVGK-EKP 238
Query: 235 WVSLP 239
+SLP
Sbjct: 239 EISLP 243
>gi|15668645|ref|NP_247443.1| 30S ribosomal protein S4e [Methanocaldococcus jannaschii DSM 2661]
gi|1710764|sp|P54039.1|RS4E_METJA RecName: Full=30S ribosomal protein S4e
gi|1591170|gb|AAB98457.1| SSU ribosomal protein S4E [Methanocaldococcus jannaschii DSM 2661]
Length = 244
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 133/244 (54%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G K+HLKRL AP W L + F +P G H E LPL+L++R+ LKYA RE
Sbjct: 4 KGPKRHLKRLAAPVRWELPRKIHKFTVRPLPGAHPMSESLPLLLIVRDILKYADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ VLVDG+VR ++ P G MDVVS+P NEN+R+L+D KGR +L E K
Sbjct: 64 KIIKMGKVLVDGRVRKEEKLPVGLMDVVSLPDANENYRVLFDRKGRIKLKPT--ENPDVK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLEENKITDFIK 174
LCK+++ + G +N +DGR I+ DP + K DT+ + + E +I I
Sbjct: 122 LCKIKNKTVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIP 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F+VG + +TGG++ G I E+ + + +++ G +F T VF +G +P
Sbjct: 182 FEVGKLAYITGGKHVGDFAKIVEIERRGIYPDIVTLENMDGEKFKTVKDYVFVVG-DEEP 240
Query: 235 WVSL 238
+ L
Sbjct: 241 IIKL 244
>gi|256810634|ref|YP_003128003.1| 30S ribosomal protein S4e [Methanocaldococcus fervens AG86]
gi|256793834|gb|ACV24503.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
fervens AG86]
Length = 244
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 134/244 (54%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G K+HLKRL AP W L + F +P G H E +PL+L++R+ LKYA RE
Sbjct: 4 KGPKRHLKRLAAPVRWELPRKVHKFTVRPLPGAHPMSESIPLLLIVRDILKYADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ VLVDG+VR ++ P G MDVVS+P NEN+R+L+D KGR +L E K
Sbjct: 64 KIIKMGKVLVDGRVRKEEKLPVGLMDVVSLPDANENYRVLFDRKGRVKLKPT--ENPDVK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLEENKITDFIK 174
LCK+++ + G +N +DGR I+ DP + K DT+ + + E +I I
Sbjct: 122 LCKIKNKTVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIP 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F+VG + +TGG++ G I + EK + + +++ G +F T VF +G +P
Sbjct: 182 FEVGKLAYITGGKHIGDFARIVDIEKRGIYPDIVTLENLEGDKFKTVKDYVFVVG-DEEP 240
Query: 235 WVSL 238
+ L
Sbjct: 241 IIKL 244
>gi|410721705|ref|ZP_11361035.1| ribosomal protein S4E [Methanobacterium sp. Maddingley MBC34]
gi|410598451|gb|EKQ53024.1| ribosomal protein S4E [Methanobacterium sp. Maddingley MBC34]
Length = 241
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 134/243 (55%), Gaps = 3/243 (1%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MA+ G +KHLKR +P+HW + + KPS GPH LPL++++R+ LK A R
Sbjct: 1 MAKMGSRKHLKRFKSPEHWPIHPKEFTWTVKPSPGPHSIEGSLPLLVIVRDILKIADNAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E I+ +LVDG++R D +P GFMDV+ +P + + +R++ + +G LH + +
Sbjct: 61 EARIIINNGEILVDGRIRKDYKFPVGFMDVIQLPTSGKAYRVVPNERGTLVLHPIEEGNT 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
+FKLC++ + G +N +DGR + K D + L++ + +I + IKF+ G
Sbjct: 121 EFKLCRIEDKVTIKGGKTQLNLHDGRNYLTEEDY-KTGDVVVLNVPDQEIKETIKFEDGA 179
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 239
I ++TGG++ G G +K + S + + G F T VF +GK KP +SLP
Sbjct: 180 IGLITGGKHIGEKGTVKEINITRSSMPNTILIETDGTTFQTLQEYVFVLGK-DKPMISLP 238
Query: 240 KGK 242
G+
Sbjct: 239 GGQ 241
>gi|374635652|ref|ZP_09707246.1| Ribosomal protein S4E, central domain protein [Methanotorris
formicicus Mc-S-70]
gi|373561505|gb|EHP87738.1| Ribosomal protein S4E, central domain protein [Methanotorris
formicicus Mc-S-70]
Length = 244
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 134/244 (54%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G +KHLKRL AP +W + + F +P GPH LPL+L++R+ LKYA RE
Sbjct: 4 KGPRKHLKRLTAPSNWQIPRKVHKFVVRPLPGPHAMDGSLPLLLIVRDILKYADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ +LVDG+ R + +P GFMDV+SIP TNE+FR L+D KGR L E K
Sbjct: 64 KIIKMGKILVDGRKRKEHKFPVGFMDVISIPDTNEHFRALFDEKGRIVLRPT--ENPDVK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLEENKITDFIK 174
LC++++ + G +N +DGR IR +P + K D + + + E +I I
Sbjct: 122 LCRIKNKTVVKGGHIQLNLHDGRNHLIRVSNPTKAEEDVYKTGDVVLMGVPEQEIKAHIP 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F+VG + +TGG++ G I + EK + I ++++ G +F T VF IG +P
Sbjct: 182 FEVGKLAYITGGKHIGEFVKIVDIEKRVFYPDIITLENSDGEKFKTIKDYVFVIG-DEEP 240
Query: 235 WVSL 238
+ L
Sbjct: 241 IIKL 244
>gi|14591522|ref|NP_143603.1| 30S ribosomal protein S4e [Pyrococcus horikoshii OT3]
gi|6647808|sp|O59430.1|RS4E_PYRHO RecName: Full=30S ribosomal protein S4e
gi|3258198|dbj|BAA30881.1| 243aa long hypothetical 30S ribosomal protein S4 [Pyrococcus
horikoshii OT3]
Length = 243
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 140/246 (56%), Gaps = 10/246 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH R +PL+ ++R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPSSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + LVDGKVR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA
Sbjct: 61 EARKILNEGKFLVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLVLHPISEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLEENKITDFIK 174
K ++R+ + + +N +DG + PL + ++ T+ + + E +I + +
Sbjct: 121 NIKPLRIRNKRMVKGAKVQLNFHDGTN--HLIPLTEKDNYFTSYTVLMKVPEREIMEVLP 178
Query: 175 FDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSK 233
F+ G V VT G+N R G I++ ++ G + + I+D G F T F +GK K
Sbjct: 179 FEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFVVGK-DK 237
Query: 234 PWVSLP 239
P +SLP
Sbjct: 238 PKISLP 243
>gi|413942294|gb|AFW74943.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 307
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 72/77 (93%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL KVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DL+ NKI DF KFDVGN+
Sbjct: 231 FKLFKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLKTNKIMDFFKFDVGNV 290
Query: 181 VMVTGGRNRGRVGIIKN 197
VMVTGGRN GRVG+IKN
Sbjct: 291 VMVTGGRNTGRVGVIKN 307
>gi|289193204|ref|YP_003459145.1| ribosomal protein S4E, central domain protein [Methanocaldococcus
sp. FS406-22]
gi|288939654|gb|ADC70409.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
sp. FS406-22]
Length = 244
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 134/244 (54%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G K+HLKRL AP W L + F +P G H E LPL+L++R+ LKYA RE
Sbjct: 4 KGPKRHLKRLAAPVRWELPRKIHKFTVRPLPGAHPMSESLPLLLIIRDVLKYADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ VLVDG+VR ++ P G MDVVS+P+ +EN+R+L+D KGR +L E K
Sbjct: 64 KIIKMGKVLVDGRVRKEEKLPVGLMDVVSLPEADENYRVLFDRKGRIKLKPT--ENPDVK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLEENKITDFIK 174
LCK+++ + G +N +DGR I+ DP + K DT+ + + E +I I
Sbjct: 122 LCKIKNKTVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIP 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F+VG + +TGG++ G I E+ + + +++ G +F T VF +G +P
Sbjct: 182 FEVGKLAYITGGKHVGDFAKIVEIERRGIYPDIVTLENMDGEKFKTVKDYVFVVG-DEEP 240
Query: 235 WVSL 238
+ L
Sbjct: 241 IIKL 244
>gi|212223224|ref|YP_002306460.1| 30S ribosomal protein S4e [Thermococcus onnurineus NA1]
gi|212008181|gb|ACJ15563.1| SSU ribosomal protein S4E [Thermococcus onnurineus NA1]
Length = 243
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 138/245 (56%), Gaps = 8/245 (3%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH + +PL+ ++R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPNQWYIERKAYKWAVRPRPGPHSMKTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + +LVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + ++EA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPITEKEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLEENKITDFIKF 175
K ++ + + + +N +DG D + A T+ + + E +I + I F
Sbjct: 121 NIKPLRISNKRMVKGAKVQLNLHDGSNHLVAFSEKDRFMTAY-TVLMKVPEREIIEVIPF 179
Query: 176 DVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
+VG V VT G+N R G +++ R+ G + + I+D G F T F +GK KP
Sbjct: 180 EVGAYVFVTQGKNVARKGKVVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFVVGK-DKP 238
Query: 235 WVSLP 239
+SLP
Sbjct: 239 EISLP 243
>gi|409096171|ref|ZP_11216195.1| 30S ribosomal protein S4e [Thermococcus zilligii AN1]
Length = 243
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 140/244 (57%), Gaps = 6/244 (2%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W L + +A +P GPH +PL+ ++R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPTSWYLHRKEYKWAVRPMPGPHSMGTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + VLVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA
Sbjct: 61 EAKKILNEGKVLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPD-PLIKANDTIKLDLEENKITDFIKFD 176
K K ++ + + + +N +DG + + + + + T+ + + E +I + I F+
Sbjct: 121 KLKPFRITNKRMVKGSKVQLNLHDGSNHLVGFAEKDSFRTSYTVLMKVPEREIVEVIPFE 180
Query: 177 VGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW 235
VG V VT G+N R G +++ R+ G + + I+D G +F T F +GK +P
Sbjct: 181 VGAYVFVTQGKNVARRGKVVEIRQFPMGWPDVVTIEDENGEKFDTLKEYAFVLGK-DRPI 239
Query: 236 VSLP 239
+SLP
Sbjct: 240 ISLP 243
>gi|390960782|ref|YP_006424616.1| 30S ribosomal protein S4e [Thermococcus sp. CL1]
gi|390519090|gb|AFL94822.1| 30S ribosomal protein S4e [Thermococcus sp. CL1]
Length = 243
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 139/245 (56%), Gaps = 8/245 (3%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W + + +A +P GPH + +PL+ ++R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPNQWYIHRKAYKWAVRPRPGPHSMKTSIPLLYIVRDYLGYARTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + +LVDG+VR D +P G MDV+SIP+T E++R+L + G+ LH + ++EA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVISIPETGEHYRVLPNRIGKLILHPISEKEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLEENKITDFIKF 175
K ++ + + + +N +DG TI D + A T+ + + + ++ + + F
Sbjct: 121 NIKPLRISNKRMVKGAKVQLNLHDGSNHLVTIDEKDKYMTAY-TVLMKVPDREVIEVLPF 179
Query: 176 DVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
+VG V VT G+N R G +++ R+ G + + I+D G F T F +GK KP
Sbjct: 180 EVGAYVFVTQGKNVARKGKVVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFVVGK-DKP 238
Query: 235 WVSLP 239
+SLP
Sbjct: 239 EISLP 243
>gi|261402344|ref|YP_003246568.1| 30S ribosomal protein S4e [Methanocaldococcus vulcanius M7]
gi|261369337|gb|ACX72086.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
vulcanius M7]
Length = 244
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 133/244 (54%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G K+HLKRL AP W L + F +P G H E LPL++V+R+ LKYA RE
Sbjct: 4 KGPKRHLKRLAAPVRWELPRKVHKFTVRPLPGAHPMSESLPLLIVVRDLLKYADNGREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ V VDG+VR ++ P G MDVVS+P+ +EN+R+L+D KGR +L E K
Sbjct: 64 KIIKMGKVFVDGRVRKEEKLPVGLMDVVSLPEADENYRVLFDRKGRVKLKPT--ENPDVK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLEENKITDFIK 174
LCK+++ + G +N +DGR I+ DP + K DT+ + + E +I I
Sbjct: 122 LCKIKNKTVVKGGHIQLNLHDGRNVVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIP 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F+VG + +TGG++ G I E+ + + +++ G +F T VF +G +P
Sbjct: 182 FEVGKLAYITGGKHVGDFAKIVEIERRGIYPDIVTLENMEGEKFKTVKDYVFVVG-DEEP 240
Query: 235 WVSL 238
+ L
Sbjct: 241 IIKL 244
>gi|413942295|gb|AFW74944.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 152
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 72/77 (93%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKL KVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DL+ NKI DF KFDVGN+
Sbjct: 76 FKLFKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLKTNKIMDFFKFDVGNV 135
Query: 181 VMVTGGRNRGRVGIIKN 197
VMVTGGRN GRVG+IKN
Sbjct: 136 VMVTGGRNTGRVGVIKN 152
>gi|14520545|ref|NP_126020.1| 30S ribosomal protein S4e [Pyrococcus abyssi GE5]
gi|17369748|sp|Q9V1U8.1|RS4E_PYRAB RecName: Full=30S ribosomal protein S4e
gi|5457761|emb|CAB49251.1| rps4E SSU ribosomal protein S4E [Pyrococcus abyssi GE5]
gi|380741072|tpe|CCE69706.1| TPA: 30S ribosomal protein S4e [Pyrococcus abyssi GE5]
Length = 243
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 140/246 (56%), Gaps = 10/246 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH R +PL+ ++R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + LVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA
Sbjct: 61 EARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLEENKITDFIK 174
K ++R+ + + +N +DG + PL + ++ T+ + + E +I + +
Sbjct: 121 NIKPLRIRNKRMVKGAKIQLNFHDGTN--HLIPLSEKDNYFTSYTVLMKVPEREILEVLP 178
Query: 175 FDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSK 233
F+ G V VT G+N R G I++ ++ G + + I+D G F T F +G+ K
Sbjct: 179 FEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFVVGR-DK 237
Query: 234 PWVSLP 239
P +SLP
Sbjct: 238 PRISLP 243
>gi|432114688|gb|ELK36527.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 269
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 83/105 (79%)
Query: 155 KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL 214
+ NDTI++DLE ++ITD IKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA
Sbjct: 165 RVNDTIQIDLETDRITDCIKFDAGNLCMVTGGANLGRIGMITNRERHPGSFDGVHVKDAN 224
Query: 215 GHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 259
G+ FA +L N F GKG+KPW+SLP+GKGI L+I EE KR AA+
Sbjct: 225 GNSFAAQLSNSFVTGKGNKPWISLPRGKGICLTIAEERDKRLAAK 269
>gi|302348026|ref|YP_003815664.1| 30S ribosomal protein S4e [Acidilobus saccharovorans 345-15]
gi|302328438|gb|ADL18633.1| 30S ribosomal protein S4e [Acidilobus saccharovorans 345-15]
Length = 250
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 138/251 (54%), Gaps = 11/251 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G +HLK L+AP + + + KPS GPH + LPL++V+R+ LKYA T R
Sbjct: 1 MARMGGSRHLKALSAPSVQRIPRKVRPWTVKPSPGPHPADRSLPLLIVIRDLLKYAETAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E I+ V VDGKV D +P G MD+V +P N +R++ D G RL + EEA
Sbjct: 61 EATKIISSGQVKVDGKVVRDYKFPIGVMDIVELPSLNLYYRVVPDPTGTLRLVPISKEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTI-------RYPDPL-IKANDTIKLDLEENKITD 171
KL ++ V + G ++ DGR + R P L K D++ L++ E + D
Sbjct: 121 SLKLLRIEGVTTLKGGHFQVHLSDGRNVLVRVEDSRKPGQLPYKPLDSLVLNVPEGTVKD 180
Query: 172 FIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGK 230
I+F G++ +V GRN G++G I + + G ++ +QD+ G+ F T L N++ +G+
Sbjct: 181 HIEFKEGSLALVVWGRNMGKLGKIVSVTRGWGWDRSVASLQDSAGNSFETSLSNIYVVGR 240
Query: 231 GSKPWVSLPKG 241
KP V++ +G
Sbjct: 241 -DKPVVTVTQG 250
>gi|332158011|ref|YP_004423290.1| 30S ribosomal protein S4e [Pyrococcus sp. NA2]
gi|331033474|gb|AEC51286.1| 30S ribosomal protein S4e [Pyrococcus sp. NA2]
Length = 243
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 137/245 (55%), Gaps = 8/245 (3%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH R +PL+ ++R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPPSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + LVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA
Sbjct: 61 EARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYP----DPLIKANDTIKLDLEENKITDFIKF 175
K ++R+ + + +N +DG P D + T+ + + E +I + + F
Sbjct: 121 NIKPLRIRNKRMVKGAKVQLNFHDGTNHLVPFSEKDNYFTSY-TVLMKVPEREILEVLPF 179
Query: 176 DVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
+ G V VT G+N R G I++ ++ G + + I+D G F T F +G+ KP
Sbjct: 180 EKGAYVFVTQGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKP 238
Query: 235 WVSLP 239
+SLP
Sbjct: 239 KISLP 243
>gi|389853105|ref|YP_006355339.1| 30S ribosomal protein S4e [Pyrococcus sp. ST04]
gi|388250411|gb|AFK23264.1| RPS4, small subunit ribosomal protein S4e [Pyrococcus sp. ST04]
Length = 243
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 139/246 (56%), Gaps = 10/246 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH + +PL+ ++R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPPSWYIERKAYKWAVRPRPGPHNMKTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + LVDGKVR D +P G MDVVSIP+T E++R+L ++ G+ LH + +EEA
Sbjct: 61 EARKILNEGKFLVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLPNSIGKLILHPISEEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLEENKITDFIK 174
K ++R+ + + +N +DG + PL + ++ T+ + + + +I + +
Sbjct: 121 NIKPLRIRNKRMVKGAKIQLNFHDGTN--HLIPLSEKDNYFTSYTVLMKVPDREILEVLP 178
Query: 175 FDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSK 233
F+ G V VT G+N R G I+ + G + + I+D G F T F +G+ K
Sbjct: 179 FEKGAYVFVTQGKNVARKGRIVDIKRFPMGWPDVVTIEDEEGELFDTLKEYAFVVGR-DK 237
Query: 234 PWVSLP 239
P +SLP
Sbjct: 238 PKISLP 243
>gi|390938979|ref|YP_006402717.1| 30S ribosomal protein S4E, central domain-containing protein
[Desulfurococcus fermentans DSM 16532]
gi|390192086|gb|AFL67142.1| Ribosomal protein S4E, central domain protein [Desulfurococcus
fermentans DSM 16532]
Length = 252
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 137/249 (55%), Gaps = 10/249 (4%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
+ G +HLK +NAP++W + + +A KPS GPH LPL++++R+ L YA T +E
Sbjct: 3 SMGGSRHLKAINAPRYWPILRKEYKWAVKPSPGPHPISRSLPLLILVRDMLGYAKTGKEA 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
++ + + +DG+VR D +P G MDV+ I N+ +R++ L + EEA F
Sbjct: 63 RRLIAEGYFKIDGRVRRDYKFPVGVMDVIEIVGINKYYRVIPVPTKVLGLIEISREEASF 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPLIKANDT------IKLDLEENKITDFI 173
KLC++ + + G +N +DGR IR DP DT +KL + +I D++
Sbjct: 123 KLCRIENKTTVKNGHIQLNLHDGRNVLIRVNDPRNPVEDTYDTLGVLKLSIPVQQILDYV 182
Query: 174 KFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGS 232
G I +V+GGRN GRVG I + K + +I ++D G++F T L +F IG
Sbjct: 183 PLKEGVIAIVSGGRNVGRVGKIVSIHKGMRRYRSIVTLEDKQGNKFQTSLDYIFPIGV-E 241
Query: 233 KPWVSLPKG 241
KP + LP+G
Sbjct: 242 KPLIKLPEG 250
>gi|449707481|gb|EMD47134.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
Length = 112
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 78/102 (76%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AK
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 102
>gi|414868312|tpg|DAA46869.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 161
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 187
S++ KGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN MVTGGR
Sbjct: 73 SIETNMKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGN--MVTGGR 130
Query: 188 NRGRVGIIKNREKHKGSFETIHI 210
N RVG+IK+REKHKGSFETIH+
Sbjct: 131 NTRRVGVIKHREKHKGSFETIHV 153
>gi|158187822|gb|ABW23200.1| ribosomal protein rps4 [Eurythoe complanata]
Length = 113
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 84/104 (80%)
Query: 98 NFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAN 157
NFR +YD KGRF +H ++ EEAK+KLC+V + + G KG+P++ T+D RTIRYPDPLI+ N
Sbjct: 1 NFRPIYDVKGRFTVHRIQPEEAKYKLCRVGAWETGPKGVPFLVTHDARTIRYPDPLIRVN 60
Query: 158 DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 201
D++++D+ KI DFIKFD GN+ M+TGGRN GRVG++ +RE+H
Sbjct: 61 DSVQVDIAAGKIKDFIKFDSGNLCMITGGRNLGRVGLVTHRERH 104
>gi|449703142|gb|EMD43643.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
gi|449709756|gb|EMD48960.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
Length = 106
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 78/102 (76%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AK
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 102
>gi|320101354|ref|YP_004176946.1| 30S ribosomal protein S4 [Desulfurococcus mucosus DSM 2162]
gi|319753706|gb|ADV65464.1| SSU ribosomal protein S4E [Desulfurococcus mucosus DSM 2162]
Length = 252
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 134/252 (53%), Gaps = 20/252 (7%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIA 63
G +HL LNAP++W + + + KPS GPH +PL++++RN L YA T RE
Sbjct: 5 GGSRHLNALNAPRYWPILRKEYKWVVKPSPGPHAIERSIPLLVLVRNVLGYAETAREARR 64
Query: 64 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 123
++ H VDGKVR D +P G MDV+ + +T E +R++ L + EEA FKL
Sbjct: 65 LIAGGHFKVDGKVRKDYKFPVGLMDVIEVVETGELYRVIPVPTRVLGLVKIPREEASFKL 124
Query: 124 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-------------TIKLDLEENKIT 170
C++ + + G +N +DGR + L++ ND +KL + ++
Sbjct: 125 CRIENKVTVKGGHIQLNLHDGRNL-----LVRVNDARNPVEDVYETLGAVKLSIPVQQLL 179
Query: 171 DFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIG 229
D+I G I +V+GGRN GRVG + + + + +I I+D G+ F T L +F IG
Sbjct: 180 DYIPLKEGVIAIVSGGRNVGRVGKVVSIHRGMKRYRSIVTIEDRSGNRFQTSLDYIFPIG 239
Query: 230 KGSKPWVSLPKG 241
KP ++LP+G
Sbjct: 240 L-EKPLITLPEG 250
>gi|134045213|ref|YP_001096699.1| 30S ribosomal protein S4e [Methanococcus maripaludis C5]
gi|189045352|sp|A4FWA9.1|RS4E_METM5 RecName: Full=30S ribosomal protein S4e
gi|132662838|gb|ABO34484.1| SSU ribosomal protein S4E [Methanococcus maripaludis C5]
Length = 244
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 132/244 (54%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G +KHLKRL AP +W L + AF +PS GPH + LPL+LV+R+ LKYA RE
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ +L+DG R + +PAG MDV+SIP+ +EN+ +L+D GR L + ++A K
Sbjct: 64 KIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLK--KTDKADAK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLEENKITDFIK 174
LCK+ + + G +N +DGR + + + K D++ + + E I +
Sbjct: 122 LCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVA 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F G + VTGG++ G I E + + +++ G +F T VF +G+ +P
Sbjct: 182 FGEGKLAYVTGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEP 240
Query: 235 WVSL 238
+S+
Sbjct: 241 VISM 244
>gi|344257870|gb|EGW13974.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 137
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Query: 151 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
D LIK NDTI++DLE KI FIKFD GN+ MVTGG N GR G+I NRE+H GSF+ +H+
Sbjct: 6 DTLIKVNDTIQIDLETGKIAYFIKFDTGNLCMVTGGANLGRTGVITNRERHPGSFDVVHV 65
Query: 211 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 260
+DA G+ FATR N+ IGK +KPW+SLP+GKG L+I EE R+ ++Q
Sbjct: 66 KDANGNSFATRPSNILVIGKSNKPWISLPQGKGTCLTIAEE-RQEASSQT 114
>gi|289597181|ref|YP_003483877.1| ribosomal protein S4E, central domain protein [Aciduliprofundum
boonei T469]
gi|289534968|gb|ADD09315.1| Ribosomal protein S4E, central domain protein [Aciduliprofundum
boonei T469]
Length = 236
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 4/236 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H+KRL AP+ W + + FAPK S GPH + E +PL++VLR L A RE I
Sbjct: 1 MSDHVKRLAAPRTWPIARKKYPFAPKVSPGPHGAHESIPLLVVLREILGIASNKREAKKI 60
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L R V VDG+V D +P GFMDV+SI N+++R +YD G R+ + ++ A++KL
Sbjct: 61 LNSRKVKVDGRVVRDVKFPIGFMDVISIGDINKHYRAVYDVNGNMRIVEIPEDHAEWKLV 120
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
++ + G +N +DGR I + K D +K+ L +I G++ +VT
Sbjct: 121 RIENKSVVPGGKIQLNLHDGRNILLDENKYKTGDVLKIKLPTQEILSHYPLAEGSVAIVT 180
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
GG +RGRV IK + + + ++ G E R VF IG G KP +++P+
Sbjct: 181 GGTHRGRVAHIKEYVVVRSPQDNM-VRFEEGFEIPKRY--VFVIGVG-KPEITIPE 232
>gi|150402580|ref|YP_001329874.1| 30S ribosomal protein S4e [Methanococcus maripaludis C7]
gi|189045353|sp|A6VGZ7.1|RS4E_METM7 RecName: Full=30S ribosomal protein S4e
gi|150033610|gb|ABR65723.1| Ribosomal protein S4E, central [Methanococcus maripaludis C7]
Length = 244
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 130/244 (53%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G +KHLKRL AP +W L + AF +PS GPH + LPL+LV+R+ LKYA RE
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ +L+DG R + +PAG MDV+SIP+ +EN+ +L+D GR L +A K
Sbjct: 64 KIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLKKTDKTDA--K 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLEENKITDFIK 174
LCK+ + + G +N +DGR + + + K D++ + + E I +
Sbjct: 122 LCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVA 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F G + VTGG++ G I E + + +++ G +F T VF +G+ +P
Sbjct: 182 FGEGKLAYVTGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEP 240
Query: 235 WVSL 238
+S+
Sbjct: 241 VISM 244
>gi|150399473|ref|YP_001323240.1| 30S ribosomal protein S4e [Methanococcus vannielii SB]
gi|133944|sp|P14023.1|RS4E_METVA RecName: Full=30S ribosomal protein S4e
gi|189045356|sp|A6UQ56.1|RS4E_METVS RecName: Full=30S ribosomal protein S4e
gi|44760|emb|CAA34692.1| unnamed protein product [Methanococcus vannielii]
gi|150012176|gb|ABR54628.1| Ribosomal protein S4E, central [Methanococcus vannielii SB]
Length = 244
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 132/244 (54%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G +KHLKRL AP +W L + F +PS GPH + LPL+L++R+ LK A RE
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKERTFTVRPSPGPHSMDKSLPLLLIVRDTLKCADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ +L+DG R + +P G MDV+SIP+ NEN+ +L+D GR L + E+ K
Sbjct: 64 KIIQMGKILIDGVKRKEYKHPVGLMDVLSIPELNENYLVLFDENGRISLK--KTEKTGVK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLEENKITDFIK 174
LCK+ + + G +N +DGR ++ + + K D++ + L E + ++
Sbjct: 122 LCKIVNKTVIKGGHIQLNLHDGRNQIVKVANALKAEEDIYKTGDSVLVSLPEQAVVGHVE 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F+ G + +TGG++ G + EK + + +++ G +F T VF +G+ +P
Sbjct: 182 FNEGKLAYITGGKHVGEFAKVVEVEKRTLYSDIVTLENKDGEKFKTIKPYVFIVGQ-DEP 240
Query: 235 WVSL 238
+S+
Sbjct: 241 VISM 244
>gi|308813181|ref|XP_003083897.1| putative ribosomal protein S4 (ISS) [Ostreococcus tauri]
gi|116055779|emb|CAL57864.1| putative ribosomal protein S4 (ISS) [Ostreococcus tauri]
Length = 133
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 72/96 (75%), Gaps = 12/96 (12%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPS------------SGPHKSRECLPLILVL 48
MARG KKHLKRLNAPKHWMLDKLGG FAPKPS GPHK RECLPL L+L
Sbjct: 36 MARGPKKHLKRLNAPKHWMLDKLGGVFAPKPSPGACARPSKGPCEGPHKQRECLPLCLIL 95
Query: 49 RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84
RNRLKYALTY+EV ILMQR V VDGK+R DK +P
Sbjct: 96 RNRLKYALTYKEVTTILMQRCVKVDGKIRMDKCFPC 131
>gi|432329001|ref|YP_007247145.1| ribosomal protein S4E [Aciduliprofundum sp. MAR08-339]
gi|432135710|gb|AGB04979.1| ribosomal protein S4E [Aciduliprofundum sp. MAR08-339]
Length = 236
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 130/236 (55%), Gaps = 4/236 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H+KRL AP+ W + + FAPK S GPH + +P+++VLR+ LK A RE I
Sbjct: 1 MSDHVKRLAAPRVWPIVRKKYTFAPKISPGPHPAERAVPMLIVLRDMLKLANNRREAKKI 60
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L R + VDG+V TD +P GFMDV++I ++N+R +YD G R+ + + A++KL
Sbjct: 61 LNSRKIKVDGRVVTDIKFPIGFMDVITIDDMDKNYRAVYDIYGNLRIVEIPKDNAEWKLV 120
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
++ G +N +DGR I + D +K+ + +I G++ ++
Sbjct: 121 RIEDKHIVPGGKIQLNLHDGRNILLDENKYHTKDVLKIKVPTQEIIAHYPMAEGSVAIII 180
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
GG++RGRV IK +G + + ++ G E +R NVF IG G KP +++P+
Sbjct: 181 GGKHRGRVAHIKEYVVVRGPQDNM-VKFEEGFEVNSR--NVFVIGVG-KPEITIPE 232
>gi|297619576|ref|YP_003707681.1| 30S ribosomal protein S4E [Methanococcus voltae A3]
gi|297378553|gb|ADI36708.1| Ribosomal protein S4E, central domain protein [Methanococcus voltae
A3]
Length = 244
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 130/245 (53%), Gaps = 11/245 (4%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
+G K+HLKRL AP +W + + F +P+ G H + LPL+L++R+ LKYA RE
Sbjct: 3 VKGPKRHLKRLAAPANWQIPRKVRTFTVRPAPGSHAMDKSLPLLLIIRDVLKYADNSREA 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ +L+DGK R + P G MD++S+P NEN+ +L+D GR L + EEA
Sbjct: 63 KKIIQTGKILIDGKKRKEYKLPVGLMDLISVPLINENYVVLFDESGRLTLKKV--EEAGV 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLEENKITDFI 173
KLCK+ + + G +N +DGR + + + K D+I L + E KI +
Sbjct: 121 KLCKIVNKTVIKGGHIQLNLHDGRNQIITVADATKAEEDVYKTGDSILLSIPEQKIAGHV 180
Query: 174 KFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSK 233
+F + VTGG++ G I E+ K + I ++ G +F T VF +G ++
Sbjct: 181 QFGENKLAYVTGGKHVGEFAKIIEIEERKLYADIITLETKDGEQFKTVKDYVFIVGD-NE 239
Query: 234 PWVSL 238
P ++L
Sbjct: 240 PVINL 244
>gi|336121758|ref|YP_004576533.1| 30S ribosomal protein S4e [Methanothermococcus okinawensis IH1]
gi|334856279|gb|AEH06755.1| 30S ribosomal protein S4e [Methanothermococcus okinawensis IH1]
Length = 247
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 124/236 (52%), Gaps = 10/236 (4%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
++G K+HLKRL AP +W L + F + GPH LPL+L++R+ L YA RE
Sbjct: 3 SKGPKRHLKRLPAPTNWQLPRKVKKFTTRALPGPHSMDNSLPLLLIVRDILGYADNAREA 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
I+ +LVDG R + YPAG MDV+SIP TNENF +L D KGR L + ++
Sbjct: 63 KKIIKMGKILVDGVKRKEHRYPAGLMDVISIPDTNENFLVLLDEKGRITLK--KTDKNDV 120
Query: 122 KLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLEENKITDFI 173
KLCK+++ + G +N +DGR + + + K D + + + E +I +
Sbjct: 121 KLCKIKNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDIYKTGDCVLISIPEQEIVGHV 180
Query: 174 KFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 229
+F G + +TGG++ G I EK K + I ++ G +F T VF +G
Sbjct: 181 QFGEGKLAYITGGKHAGDFAKIIEIEKRKLYPDIITLETKDGEQFKTIKDYVFVVG 236
>gi|18978184|ref|NP_579541.1| 30S ribosomal protein S4 [Pyrococcus furiosus DSM 3638]
gi|397652540|ref|YP_006493121.1| 30S ribosomal protein S4e [Pyrococcus furiosus COM1]
gi|22096123|sp|Q8U011.1|RS4E_PYRFU RecName: Full=30S ribosomal protein S4e
gi|428697934|pdb|3J20|E Chain E, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18893993|gb|AAL81936.1| SSU ribosomal protein S4E [Pyrococcus furiosus DSM 3638]
gi|393190131|gb|AFN04829.1| 30S ribosomal protein S4e [Pyrococcus furiosus COM1]
Length = 243
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 136/245 (55%), Gaps = 8/245 (3%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH R +PL+ ++R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E IL + LVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + ++EA
Sbjct: 61 EARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEDEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLEENKITDFIKF 175
K ++R+ + + +N +DG +I D + T+ + + E +I + + F
Sbjct: 121 FIKPLRIRNKRMIKGARVQLNFHDGTNHIVSIAEKDNYFTSY-TVLMKVPEREILEVLPF 179
Query: 176 DVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
+ G V VT G+N R G I++ + G + + I+D G F T F +G KP
Sbjct: 180 EKGAYVFVTQGKNVARKGRIVEIKRFPMGWPDVVTIEDEEGELFDTLKEYAFVVGT-DKP 238
Query: 235 WVSLP 239
+SLP
Sbjct: 239 KISLP 243
>gi|159905645|ref|YP_001549307.1| 30S ribosomal protein S4e [Methanococcus maripaludis C6]
gi|226697783|sp|A9A9Q2.1|RS4E_METM6 RecName: Full=30S ribosomal protein S4e
gi|159887138|gb|ABX02075.1| Ribosomal protein S4E, central domain protein [Methanococcus
maripaludis C6]
Length = 244
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 130/244 (53%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G +KHLKRL AP +W L + AF +PS GPH + LPL+LV+R+ LKYA RE
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDILKYADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ +L+DG R + +PAG MDV+SIP+ +EN+ +L+D GR L +A K
Sbjct: 64 KIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLKKTDKTDA--K 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLEENKITDFIK 174
LCK+ + + G +N +DGR + + + K D++ + + E I +
Sbjct: 122 LCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVA 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F G + +TGG++ G I E + + +++ G +F T VF +G+ +P
Sbjct: 182 FGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEP 240
Query: 235 WVSL 238
+S+
Sbjct: 241 VISM 244
>gi|307595641|ref|YP_003901958.1| 30S ribosomal protein S4 [Vulcanisaeta distributa DSM 14429]
gi|307550842|gb|ADN50907.1| Ribosomal protein S4E, central domain protein [Vulcanisaeta
distributa DSM 14429]
Length = 247
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 132/240 (55%), Gaps = 13/240 (5%)
Query: 7 KHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
+HL+R AP+ W + + +PS GPH + LPL L++R+ L+YA T RE ++
Sbjct: 4 RHLRRYQAPEWWPISTKEAVWVVRPSPGPHPLAKSLPLALLVRDVLRYAKTLREARYVIG 63
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+ + VDGKVR D YP G MDVV I TNE +R++ + EEA++KLC++
Sbjct: 64 KGLIKVDGKVRRDYKYPVGLMDVVEIVPTNEVYRMVPHPTKFLWPVLISQEEARYKLCRI 123
Query: 127 RSVQFGQKGIPYINTYDGRTIRYP-------DPLIKANDTIKLDLEENKITDFIKFDVGN 179
+ + G +N +DGR I+ P D L D++ +D+ ENKI D++K ++G+
Sbjct: 124 ENKTMVKGGQIQLNLHDGRNIQLPYEEGSKYDTL----DSVLIDIAENKIVDYVKLELGS 179
Query: 180 IVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
+ ++ G+N G G I + + ++ T+ I G E T + +F +GK KP +++
Sbjct: 180 LGLIVDGKNVGYYGKITEIVQTYRKRESTVKIITNEGKEVRTIVDYLFAVGK-EKPLITI 238
>gi|284162448|ref|YP_003401071.1| 30S ribosomal protein S4E, central domain-containing protein
[Archaeoglobus profundus DSM 5631]
gi|284012445|gb|ADB58398.1| Ribosomal protein S4E, central domain protein [Archaeoglobus
profundus DSM 5631]
Length = 232
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 132/233 (56%), Gaps = 6/233 (2%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H KRL+APK + + + + KPS GPH ++E +PL++V+R+ L+ A T RE I+
Sbjct: 2 HQKRLSAPKTYKIPRKIFKWTVKPSPGPH-NKEAVPLLIVVRDYLQLADTAREARRIIAS 60
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
+LVDG R D +P G DV+ IPK N+++R+++D KGR+ + D+ KL K+
Sbjct: 61 GEILVDGVPRKDYKFPVGLFDVIKIPKLNKSYRMVFDEKGRYVPIEIEDDN--LKLYKIV 118
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 187
+ + G +N +DG + D K D+I +++ E KI D++ F++G +VM+TGG
Sbjct: 119 NKTTIKGGRIQLNLFDGTNV-LGDNSFKTKDSILMEIPEKKIVDYLPFEIGALVMITGGT 177
Query: 188 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK--GSKPWVSL 238
+ G +G IK+ + + S + + G E T VF IGK KP + L
Sbjct: 178 HAGEIGRIKDYKIVRSSSPNLVTVEVEGRELTTIEDYVFVIGKKDDEKPVIDL 230
>gi|218884474|ref|YP_002428856.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
gi|254764558|sp|B8D5V8.1|RS4E_DESK1 RecName: Full=30S ribosomal protein S4e
gi|218766090|gb|ACL11489.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
Length = 252
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 135/249 (54%), Gaps = 10/249 (4%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
+ G +HLK +NAP++W + + + K S GPH LPL++++R+ L YA T +E
Sbjct: 3 SMGGSRHLKAINAPRYWPILRKEYRWVVKSSPGPHPISRSLPLLILVRDMLGYAKTGKEA 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
++ + + +DG+VR D +P G MDV+ I N+ +R++ L + EEA F
Sbjct: 63 RRLIAEGYFKIDGRVRRDYKFPVGVMDVIEIVGVNKYYRVIPVPTKVLGLIEISREEASF 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPLIKANDT------IKLDLEENKITDFI 173
KLC++ + + G +N +DGR IR DP DT +KL + +I D++
Sbjct: 123 KLCRIENKTTVKNGHIQLNLHDGRNVLIRVNDPRNPVEDTYDTLGVLKLSIPVQQILDYV 182
Query: 174 KFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGS 232
G I +V+GGRN GRVG I + K + +I ++D G++F T L +F IG
Sbjct: 183 PLKEGVIAIVSGGRNVGRVGKIVSIHKGMRRYRSIVTLEDKQGNKFQTSLDYIFPIGV-E 241
Query: 233 KPWVSLPKG 241
KP + LP+G
Sbjct: 242 KPLIKLPEG 250
>gi|288931522|ref|YP_003435582.1| ribosomal protein S4E, central domain protein [Ferroglobus placidus
DSM 10642]
gi|288893770|gb|ADC65307.1| Ribosomal protein S4E, central domain protein [Ferroglobus placidus
DSM 10642]
Length = 232
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 6/233 (2%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H KRL+APK + + + KPS GPH ++E +PL++++R+ L+ A T RE I+
Sbjct: 2 HQKRLSAPKTIKVPRKVSKWIVKPSPGPH-NKEAVPLLVIVRDYLQLADTAREARRIIAA 60
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
+LVDG R D +P G DVVS+PK + N+R+++D KGR+ + D + KL K+
Sbjct: 61 GEILVDGVPRKDYKFPVGLFDVVSVPKLDLNYRIVFDEKGRYVPIEITDPD--LKLYKIT 118
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 187
+ G +N +DG I + K D+I + + E +I D +KF+ G +VMVTGG
Sbjct: 119 GKTMVKGGRIQLNLFDGTNILASNEY-KTKDSILMKIPEKEIVDHLKFEEGALVMVTGGT 177
Query: 188 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK--GSKPWVSL 238
+ G +GI+K + + S + + G+EF T VF IGK +KP + L
Sbjct: 178 HAGEIGILKEYKIVRSSAPNLVTIEVEGNEFTTIEDYVFVIGKKGETKPVIQL 230
>gi|148642809|ref|YP_001273322.1| 30S ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
gi|222445040|ref|ZP_03607555.1| hypothetical protein METSMIALI_00657 [Methanobrevibacter smithii
DSM 2375]
gi|261350391|ref|ZP_05975808.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
gi|189045354|sp|A5UL76.1|RS4E_METS3 RecName: Full=30S ribosomal protein S4e
gi|148551826|gb|ABQ86954.1| ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
gi|222434605|gb|EEE41770.1| Ribosomal family S4e [Methanobrevibacter smithii DSM 2375]
gi|288861174|gb|EFC93472.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
Length = 242
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 131/240 (54%), Gaps = 5/240 (2%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MA+ G +KHLK APK W + + KPS+G H L L LV+R+ LK A R
Sbjct: 1 MAKMGSRKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
E I+ +VLVDG+V D +P GFMD++ IPKT E +R+L D KGR +L+ + EE
Sbjct: 61 EAKRIINSGNVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EEN 118
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
KLCK+ + + G +N +DG+ + + D I L + +++I + + G
Sbjct: 119 DSKLCKIVNKSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGA 178
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSF-ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
V++TGG++ G +G + ++ S TI I+++ EF T F +G+ + P +SL
Sbjct: 179 CVLITGGKHTGELGTVSEIIVNESSNPNTIIIENSAKDEFLTLKDYAFVVGEDA-PAISL 237
>gi|342905996|gb|AEL79281.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 92
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 74/90 (82%)
Query: 20 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 79
L KLGG FAP+PS+GPHK RECLPL++ LRNRLKYALT EV I+MQR + VDGKVRTD
Sbjct: 1 LLKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTNVEVTKIVMQRLIKVDGKVRTD 60
Query: 80 KTYPAGFMDVVSIPKTNENFRLLYDTKGRF 109
YPAGFMDV++I KT E FRL+YD KGR+
Sbjct: 61 PNYPAGFMDVITIEKTGEFFRLIYDVKGRY 90
>gi|45358974|ref|NP_988531.1| 30S ribosomal protein S4e [Methanococcus maripaludis S2]
gi|340624721|ref|YP_004743174.1| 30S ribosomal protein S4e [Methanococcus maripaludis X1]
gi|50403627|sp|P62428.1|RS4E_METMP RecName: Full=30S ribosomal protein S4e
gi|45047840|emb|CAF30967.1| SSU ribosomal protein S4E [Methanococcus maripaludis S2]
gi|339904989|gb|AEK20431.1| 30S ribosomal protein S4e [Methanococcus maripaludis X1]
Length = 244
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 129/244 (52%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G +KHLKRL AP +W L + F +PS GPH + LPL+LV+R+ LKYA RE
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ +L+DG R + +PAG MDV+SIP+ +E + +L+D GR L + ++ K
Sbjct: 64 KIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLK--KTDKTDVK 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLEENKITDFIK 174
LCK+ + + G +N +DGR + + + K D++ + + E I +
Sbjct: 122 LCKIVNKTVVKGGNIQLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVA 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F G + +TGG++ G I E + + +++ G +F T VF +G+ +P
Sbjct: 182 FGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEP 240
Query: 235 WVSL 238
+S+
Sbjct: 241 VISM 244
>gi|20094656|ref|NP_614503.1| 30S ribosomal protein S4 [Methanopyrus kandleri AV19]
gi|22654091|sp|Q8TW18.1|RS4E_METKA RecName: Full=30S ribosomal protein S4e
gi|19887817|gb|AAM02433.1| Ribosomal protein S4E [Methanopyrus kandleri AV19]
Length = 260
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 17/251 (6%)
Query: 4 GLKKHLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
G K+H+KRL AP W + K GG FAP+P GPH +PL++++R+ L YA RE
Sbjct: 7 GPKRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREAR 66
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
I+ + + VDG VR + +P G MDVV IP+T + +R++ + R + + +EEA+ K
Sbjct: 67 KIITRGEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVK 126
Query: 123 LCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLEEN------K 168
+C++++ + + G I +DG+ + DP + D++ L+L E K
Sbjct: 127 VCRIKNKTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWK 186
Query: 169 ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFT 227
+ D I F+ G V GR+ G VG + + +G E I +++ G +F T G +
Sbjct: 187 VVDHIPFEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIA 246
Query: 228 IGKGSKPWVSL 238
IGK +P V++
Sbjct: 247 IGK-DEPLVTV 256
>gi|435852126|ref|YP_007313712.1| ribosomal protein S4E [Methanomethylovorans hollandica DSM 15978]
gi|433662756|gb|AGB50182.1| ribosomal protein S4E [Methanomethylovorans hollandica DSM 15978]
Length = 237
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KR++ PK W + K + GPH + +PL +VLR+ L T E +
Sbjct: 1 MGKHQKRISVPKSWQISKKSNKWITSTRPGPHNRQLSIPLGVVLRDMLHVVDTRVEAKRV 60
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LVDG +R D +P G +DVVSIPK +++R+L D KGR LH L E+ KLC
Sbjct: 61 LSEGSILVDGIIRKDLRFPIGLLDVVSIPKMEQSYRVLLDRKGRLELHKLEGTESS-KLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
++ + G +N DG + + KA D++ L + + KI IK++VGN+ ++
Sbjct: 120 RILGKTVIKGGKVQLNLNDGSNLIGSNDY-KAKDSVILSVPDKKILTHIKYEVGNLALII 178
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
GG++ G++G IK+ + S + G EF T V IG KP + L
Sbjct: 179 GGKHTGKIGAIKDINTVRSSNSNTVLIAGEGEEFHTIEDYVVVIGT-DKPEIKL 231
>gi|390460190|ref|XP_003732439.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Callithrix jacchus]
Length = 231
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 129/264 (48%), Gaps = 59/264 (22%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLK APKHWM DKL AP+P G H+ R NRLK+ LT E
Sbjct: 1 MARGPKKHLKPAAAPKHWMPDKLQ-VSAPRP--GLHQLRX---------NRLKHTLTGDE 48
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
V + +Q + DG+VR D T+P+GF+DV+ + +T E+FRL +DT R H
Sbjct: 49 VKYVCVQHFIRTDGQVRVDGTHPSGFLDVIRMEQTGEHFRLAHDTNSRLASH-------- 100
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
+ GR + AN T+++ + T +KF+ G
Sbjct: 101 -------------------RRHGGRLL--------ANGTVQVQGRAREST--MKFNTGTG 131
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+VT +I NRE+ GS +H++ G+ FAT L ++F G G+ PW+SL
Sbjct: 132 CVVT-------ACVISNRERQAGSSRVVHLKGDGGNSFATSLSSIFVTGNGNTPWISLCG 184
Query: 241 GKGIKLSIIEEAR---KRQAAQAA 261
K I+L +++ R KR + A
Sbjct: 185 AKAIQLILLKXERLTTKRSSGSTA 208
>gi|156938197|ref|YP_001435993.1| 30S ribosomal protein S4 [Ignicoccus hospitalis KIN4/I]
gi|189045350|sp|A8ACD4.1|RS4E_IGNH4 RecName: Full=30S ribosomal protein S4e
gi|156567181|gb|ABU82586.1| SSU ribosomal protein S4E [Ignicoccus hospitalis KIN4/I]
Length = 255
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 137/253 (54%), Gaps = 13/253 (5%)
Query: 1 MAR--GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTY 58
MAR G K+HLKRL AP W + + +A KP GPH E +PL++++R+ L YA T
Sbjct: 1 MARVGGGKRHLKRLAAPAFWPIHRKEAVWAVKPRPGPHPIEESIPLLILVRDVLGYAETS 60
Query: 59 REVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE 118
RE ++ + + VDG+VR D +P G MDV+ I +E +R++ + EE
Sbjct: 61 REARKLIAEGRIKVDGRVRKDYKFPVGAMDVIEIVGADEYYRMIPYPVKYLVPMRIDAEE 120
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP--LIKANDT-----IKLDLEENKI 169
AK K+C++ + + G +N +DGR IR DP ++A + + + + E +I
Sbjct: 121 AKKKICRIENKVTVKGGHVQLNLHDGRNVLIRVEDPRNPVEAQEYKTLGGLLITVPEQEI 180
Query: 170 TDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTI 228
D++ F+ G I +V GRN GRVG I+ K G +T + ++D F T VF I
Sbjct: 181 LDYVPFEEGVIAIVKSGRNVGRVGRIEEIVKGMGRKKTLVKMRDVHDEVFYTVAEYVFPI 240
Query: 229 GKGSKPWVSLPKG 241
GK +P + LP+G
Sbjct: 241 GK-EEPLIKLPEG 252
>gi|110456358|gb|ABG74702.1| ribosomal protein S4-like protein [Diaphorina citri]
Length = 104
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 81/103 (78%)
Query: 160 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFA 219
I+ ++ +KI D I+FD GN+ M+TGGRN GRVG + NRE+H GSF+ +H++D GH FA
Sbjct: 1 IQYEIATSKIIDHIRFDTGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHVKDGNGHVFA 60
Query: 220 TRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
TRL NVF IGKG+K ++SLPKGKGIKL+I EE KR AA+AA+
Sbjct: 61 TRLNNVFIIGKGTKAYISLPKGKGIKLTISEERDKRLAAKAAS 103
>gi|407081049|gb|AFS89697.1| ribosomal protein S4, partial [Plutella xylostella]
Length = 92
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 73/92 (79%)
Query: 149 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 208
YPDPLIK ND+I+LD+ +I D IKFD GN+ M+TGGRN GRVG I +RE+H GSF+ +
Sbjct: 1 YPDPLIKVNDSIQLDIATCRIMDIIKFDSGNLCMITGGRNLGRVGTIVSRERHPGSFDIV 60
Query: 209 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
HI+D GH FATRL NVF IGKG+K ++SLP+
Sbjct: 61 HIKDTTGHTFATRLNNVFIIGKGTKAYISLPR 92
>gi|414868034|tpg|DAA46591.1| TPA: hypothetical protein ZEAMMB73_160801 [Zea mays]
Length = 956
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/70 (85%), Positives = 63/70 (90%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DF KFDVGN+
Sbjct: 886 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFFKFDVGNM 945
Query: 181 VMVTGGRNRG 190
VMVT G G
Sbjct: 946 VMVTAGGTPG 955
>gi|11499497|ref|NP_070738.1| 30S ribosomal protein S4e [Archaeoglobus fulgidus DSM 4304]
gi|3914913|sp|O28366.1|RS4E_ARCFU RecName: Full=30S ribosomal protein S4e
gi|2648630|gb|AAB89340.1| SSU ribosomal protein S4E (rps4E) [Archaeoglobus fulgidus DSM 4304]
Length = 235
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 131/233 (56%), Gaps = 6/233 (2%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H KRL+APK + + + + KPS GPH ++E +PL++++R+ L+ A T RE I+
Sbjct: 5 HQKRLSAPKTYKIPRKVSKWVVKPSPGPH-NKEAIPLLVLVRDFLELADTGREARRIISA 63
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
+LVDG VR D +P G DVV+IPK +++R+L+D KGR+ + E+A KL K+
Sbjct: 64 GEILVDGVVRKDYKFPVGLFDVVTIPKLEKSYRILFDEKGRYIPKEV--EDADLKLYKIT 121
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 187
+ + G +N +DG I + K D+I L + E ++ D +KF+ G +VM+TGG
Sbjct: 122 NKTLVRGGKVQLNLFDGTNILGSNDY-KTKDSILLRIPEKEVVDHLKFEEGALVMITGGT 180
Query: 188 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK--GSKPWVSL 238
+ G +G IK+ + + S + + + T VF +GK KP + L
Sbjct: 181 HAGEIGRIKSYKIVRSSAPNLVTVEGEERDITTIEDYVFVVGKKDSDKPVIDL 233
>gi|296242597|ref|YP_003650084.1| 30S ribosomal protein S4 [Thermosphaera aggregans DSM 11486]
gi|296095181|gb|ADG91132.1| SSU ribosomal protein S4E [Thermosphaera aggregans DSM 11486]
Length = 252
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 132/249 (53%), Gaps = 10/249 (4%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
+ G KHLK + AP++W + + + KPS GPH +PL+L++R+ L+ A T +E
Sbjct: 3 SMGGSKHLKSIAAPRYWPILRKEYKWVVKPSPGPHAIARSIPLLLIVRDVLRLAKTGKEA 62
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
++ + + +DGKVR D +P G MDV+ + TNE +R++ L + EEA F
Sbjct: 63 RRLISEGYFKIDGKVRRDYKFPVGMMDVIEVVGTNEYYRVVPVPTKVLDLVKIAKEEASF 122
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTI--RYPDPLIKAND------TIKLDLEENKITDFI 173
KL ++ + G +N +DGR I R DP D T+++ L +I ++I
Sbjct: 123 KLVRIEDKTTVKNGHIQLNLHDGRNILVRVSDPRNPVEDVYETLGTLQIALPGQEILNYI 182
Query: 174 KFDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 232
+ G I +++GGRN GRVG I+ + + I+D G + T L +F IG
Sbjct: 183 QLKEGVIAIISGGRNVGRVGRIVSIHRGMRRHRSIVTIEDKNGVKVQTSLDYIFPIGV-E 241
Query: 233 KPWVSLPKG 241
KP ++LP+G
Sbjct: 242 KPLITLPEG 250
>gi|116755004|ref|YP_844122.1| 30S ribosomal protein S4e [Methanosaeta thermophila PT]
gi|116666455|gb|ABK15482.1| SSU ribosomal protein S4E [Methanosaeta thermophila PT]
Length = 233
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 126/237 (53%), Gaps = 9/237 (3%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H KR+ P+ W++ + + P GPH + E LPL++V+R+ LK A REV IL +
Sbjct: 2 HRKRVTIPRSWLIPRKTSKWIATPRPGPHSAEESLPLMVVVRDLLKLADNAREVKRILHE 61
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
VLVDG VR D +P G DV+++P N+ +R++ TKG F L ++ + + KL +V
Sbjct: 62 GGVLVDGTVRRDARFPVGLFDVITVPALNKQYRMVKSTKGYFVLIEIQPDTPR-KLVRVE 120
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 187
+ + +N DG I + + D++ + L E I D IKF+VGN+ MVTGG
Sbjct: 121 NKTTLKGNRMQLNLSDGSNI-IAEGDVGTGDSLLISLPERSIEDIIKFEVGNLAMVTGGS 179
Query: 188 NRGRVGIIKNREKHKGSFE---TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
+ G G IK+ + + S TI D + T + VF IG+ + P + L G
Sbjct: 180 HTGMTGRIKSVQIVRSSMPNRVTISTDDG---DIETIIDYVFVIGRDA-PVIELEAG 232
>gi|388281854|dbj|BAM15885.1| putative 40S ribosomal protein S4, partial [Pyrus pyrifolia var.
culta]
Length = 90
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/70 (87%), Positives = 66/70 (94%)
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M GG NRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKG
Sbjct: 8 MGAGGWNRGRVGVIKNREKHKGSFETIHVQDASGHEFATRLGNVFTIGKGTKPWISLPKG 67
Query: 242 KGIKLSIIEE 251
KGIKL+IIEE
Sbjct: 68 KGIKLTIIEE 77
>gi|325967619|ref|YP_004243811.1| 30S ribosomal protein S4 [Vulcanisaeta moutnovskia 768-28]
gi|323706822|gb|ADY00309.1| 30S ribosomal protein S4E, central domain-containing protein
[Vulcanisaeta moutnovskia 768-28]
Length = 248
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 128/237 (54%), Gaps = 5/237 (2%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
++HL+R AP+ W + + +PS GPH + LPL +++R+ L+Y RE ++
Sbjct: 3 RRHLRRYQAPEWWPVSTKEATWVVRPSPGPHPLAKSLPLAILVRDVLRYTKNLREARYVI 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
+ VDGK+R D YP G MDV+ I TNE +RL+ + EEA++KLC+
Sbjct: 63 GNGLIKVDGKIRRDYKYPVGLMDVIEIIPTNETYRLVPHPTKFLWPVPISQEEARYKLCR 122
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYP---DPLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
+ + + G +N +DG+ ++ P + D++ +D+ NKI D +K ++G++ +
Sbjct: 123 IENKTMVKGGQIQLNLHDGKNLQLPYEEGSKYETLDSVLIDISGNKILDHVKLELGSLGL 182
Query: 183 VTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
+ G+N G G II+ + ++ T I + G E T + +F +GK KP V++
Sbjct: 183 IVDGKNVGYYGKIIEIIQTYRKRGSTAKIMTSDGKEVRTIIDYLFAVGK-EKPLVTI 238
>gi|62002191|gb|AAX58703.1| 40S ribosomal protein S4 [Hydractinia echinata]
Length = 91
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 73/90 (81%)
Query: 132 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 191
G+K +PYI T+D RTIRYPDP IK NDT+ +D++ K+TDFIKFD GN VMV GGRN GR
Sbjct: 2 GKKSVPYIVTHDARTIRYPDPSIKINDTVVIDVKTGKVTDFIKFDTGNTVMVIGGRNTGR 61
Query: 192 VGIIKNREKHKGSFETIHIQDALGHEFATR 221
VGII +RE+H S++ +HI+DA G++FATR
Sbjct: 62 VGIITHRERHASSYDIVHIKDAAGNQFATR 91
>gi|147919321|ref|YP_686943.1| 30S ribosomal protein S4e [Methanocella arvoryzae MRE50]
gi|121690304|sp|Q0W1X6.1|RS4E_UNCMA RecName: Full=30S ribosomal protein S4e
gi|110622339|emb|CAJ37617.1| 30S ribosomal protein S4E [Methanocella arvoryzae MRE50]
Length = 234
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 122/238 (51%), Gaps = 9/238 (3%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
HLKR+ AP+ W + + + KP G H +PL++VLR+ LK A E+ IL +
Sbjct: 5 HLKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHE 64
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
VLVDGKVR D Y G D +SIP N N+R++ G+F L + D A K+CK+
Sbjct: 65 GKVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKFHLVPVTDASA--KICKIV 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 187
+ + G +N +DG T+ + K D++ L + E KI + VG++VMVT G+
Sbjct: 123 NKTALRGGKIQLNLHDGTTMIASNDY-KTKDSVILKMPERKIDQHFTYAVGSLVMVTEGK 181
Query: 188 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 245
+ G +G +K + + S + +F T VF IGK S P +G+K
Sbjct: 182 HSGEIGKVKEIKVVRSSAPNTVVITTPEGDFETIEQYVFVIGKDS------PAVQGVK 233
>gi|386001173|ref|YP_005919472.1| 30S ribosomal protein S4e [Methanosaeta harundinacea 6Ac]
gi|357209229|gb|AET63849.1| 30S ribosomal protein S4e [Methanosaeta harundinacea 6Ac]
Length = 211
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 110/209 (52%), Gaps = 4/209 (1%)
Query: 30 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 89
K GPH + +PL++V+R+ L RE +L + VLVDGK R D +P G DV
Sbjct: 3 KTRPGPHSEKGSIPLVVVVRDLLGLVDNSREAKRVLHEGGVLVDGKARKDLNFPVGIFDV 62
Query: 90 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 149
+S+P ++NFRLL D KGRF LH L EA+ KLC++ Q G +N DG I
Sbjct: 63 ISVPALDKNFRLLTDAKGRFNLHELEAGEAR-KLCRIEKKTVLQGGKTQLNLNDGTNILA 121
Query: 150 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 209
+ I L + + +I+D I+F GN+ MV GG + G VG IK E K S
Sbjct: 122 EGDYTTRSSVI-LSIPDKEISDVIEFKEGNLAMVVGGTHSGEVGTIKVIEVVKSSRPNRV 180
Query: 210 IQDALGHEFATRLGNVFTIGKGSKPWVSL 238
I EF T + +VF IG+ KP + L
Sbjct: 181 IISG-KEEFETTVDHVFMIGR-DKPAIKL 207
>gi|170291174|ref|YP_001737990.1| 30S ribosomal protein S4e [Candidatus Korarchaeum cryptofilum OPF8]
gi|259495261|sp|B1L778.1|RS4E_KORCO RecName: Full=30S ribosomal protein S4e
gi|170175254|gb|ACB08307.1| Ribosomal protein S4E [Candidatus Korarchaeum cryptofilum OPF8]
Length = 235
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 122/229 (53%), Gaps = 8/229 (3%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIA 63
G +HLK L AP ++ + K + KPS GPH E +PL+L++R+ LK A T RE
Sbjct: 5 GGSRHLKSLAAPGYYPIAKRERVWVVKPSPGPHAIDEGIPLLLIVRDMLKLATTAREARR 64
Query: 64 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 123
I+ + +LVDGK R D + G MDV+SIP+ N+R++ D RL + E+K KL
Sbjct: 65 IISMKKILVDGKPRYDYKFQVGLMDVISIPEIGVNYRMVPDPHRFLRLIEIPQSESKMKL 124
Query: 124 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
KV + + G + ++DGR +K D++ ++L + D ++FD G+ V+V
Sbjct: 125 VKVIGKRTIRGGRIQLTSHDGRNFLLDGRDVKPGDSLLIELPSQSVIDHLRFDTGSSVLV 184
Query: 184 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR--LGNVFTIGK 230
T GR GR+G + +G I ++D E + R N+ +GK
Sbjct: 185 TRGRMAGRIG------RVEGIGTIIEMRDLENPELSYRGVKENLIVVGK 227
>gi|150401818|ref|YP_001325584.1| 30S ribosomal protein S4 [Methanococcus aeolicus Nankai-3]
gi|189045351|sp|A6UWV0.1|RS4E_META3 RecName: Full=30S ribosomal protein S4e
gi|150014521|gb|ABR56972.1| Ribosomal protein S4E, central [Methanococcus aeolicus Nankai-3]
Length = 244
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 130/244 (53%), Gaps = 11/244 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVI 62
+G +KHLKRL APK+W + + + +PS+GPH LPL+LVLR+ L YA RE
Sbjct: 4 KGPRKHLKRLPAPKNWQISRKTNKYTTRPSAGPHAMGSSLPLLLVLRDLLGYADNAREAK 63
Query: 63 AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK 122
++ VLVDG R D YP G MDV+S+P NE+F ++ D KGR +L+ ++D K
Sbjct: 64 KVIKMGKVLVDGVKRKDHRYPTGLMDVISLPDANESFLVVLDEKGRIKLNKIKDNTK--K 121
Query: 123 LCKVRSVQFGQKGIPYINTYDGRT--------IRYPDPLIKANDTIKLDLEENKITDFIK 174
LCK+ + + G +N +DGR + + + K D + L + E I ++
Sbjct: 122 LCKIENKTVIKGGHIQLNLHDGRNQIVKLADATKAEEDIYKTGDCVILSIPEQSIVGHVQ 181
Query: 175 FDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
F G + +TGG++ G I EK + + I ++ G +F T VF +G KP
Sbjct: 182 FGEGKLAYITGGKHVGDFAKIIGIEKKQLYPDIITLETENGEQFKTIRDYVFIVGD-DKP 240
Query: 235 WVSL 238
+S+
Sbjct: 241 VISM 244
>gi|262401341|gb|ACY66573.1| ribosomal protein S4 [Scylla paramamosain]
Length = 93
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Query: 171 DFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 230
D IKFD GN+ M+TGGRN GRVG I +RE+H GSF+ +H++DA+GH FATRL NVF IGK
Sbjct: 3 DIIKFDSGNLCMITGGRNLGRVGTIVSRERHAGSFDIVHVKDAVGHTFATRLNNVFVIGK 62
Query: 231 GSKPWVSLPKGKGIKLSIIEEARKRQAAQ 259
G+K +VSLP+GKGIKLSI EE R R+ AQ
Sbjct: 63 GNKAYVSLPRGKGIKLSIAEE-RDRRLAQ 90
>gi|395644928|ref|ZP_10432788.1| 30S ribosomal protein S4e [Methanofollis liminatans DSM 4140]
gi|395441668|gb|EJG06425.1| 30S ribosomal protein S4e [Methanofollis liminatans DSM 4140]
Length = 240
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ HLKRL AP W + K F K S GPH S +P+ + LR+++ A +EV I
Sbjct: 1 MSYHLKRLTAPVSWHIAKKEEKFVTKTSPGPH-SGAAMPVAVWLRDKMGLAGNMKEVKRI 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L QR V+++GK TD G D++SIPK +++R+L D KGR + E AK +LC
Sbjct: 60 LNQRQVILNGKPVTDPKLGLGIFDIISIPKIGKHYRVLTDKKGRMVTIEIDAEAAKTRLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE-ENK--ITDFIKFDVGNIV 181
K+R+ + G +N G + D D+I + LE EN+ I D F +GN+
Sbjct: 120 KIRNKSIVRGGKVQLNLLYGANL-LADNTYHPKDSIVVTLEGENRFAIVDHFPFAIGNMA 178
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGK 230
MV GG++ G+VG I GS + +QD G F T VF IG+
Sbjct: 179 MVIGGKHSGKVGRISEIRVAAGSIPNRVILQDKDGETFETVEQYVFMIGR 228
>gi|282164903|ref|YP_003357288.1| 30S ribosomal protein S4e [Methanocella paludicola SANAE]
gi|282157217|dbj|BAI62305.1| 30S ribosomal protein S4e [Methanocella paludicola SANAE]
Length = 234
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +HLKR+ AP+ W + + + KPS GPH +PLI+VLR+ L A +E+ I
Sbjct: 1 MSQHLKRVAAPRSWPITRKTSKWVAKPSPGPHSEEYGMPLIVVLRDLLHVADKAKEIKQI 60
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + VLVDGKVR D +P G DV+SIP + N+R++ G+F+L + D A KL
Sbjct: 61 LHEGKVLVDGKVRKDHHFPVGLFDVISIPDISANYRVMIGQDGKFKLVPVSD--ANSKLL 118
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ + G +N +DG T+ + D+I L + E I K++VG+ VT
Sbjct: 119 KIVNKTTVTGGRTQLNFHDGTTMLASNDY-HTKDSIILKVPEKSIDQHFKYEVGSTAFVT 177
Query: 185 GGRNRGRVGIIK 196
GG++ G VG IK
Sbjct: 178 GGKHAGVVGKIK 189
>gi|2275282|gb|AAB63866.1| ribosomal protein S4 homolog [Schizosaccharomyces pombe]
Length = 81
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 66/81 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG KKH KR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL RE
Sbjct: 1 MVRGPKKHFKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKVRTDKT 81
V AILMQR + VDGKVRTD T
Sbjct: 61 VKAILMQRLIKVDGKVRTDST 81
>gi|429217547|ref|YP_007175537.1| ribosomal protein S4E [Caldisphaera lagunensis DSM 15908]
gi|429134076|gb|AFZ71088.1| ribosomal protein S4E [Caldisphaera lagunensis DSM 15908]
Length = 252
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 9/244 (3%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIA 63
G + +K + AP W +++ + PKPS GPH + + LPL++VLR+ LKYA T +E I
Sbjct: 5 GGTRSIKGIAAPPFWPIERKLRPWTPKPSPGPHNAEQSLPLLVVLRDMLKYAETGKEAIK 64
Query: 64 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 123
I+ + + VDG+V D YP MDV+ IP+ +E +R++ L+ + EEA K
Sbjct: 65 IINENKIKVDGRVVNDYKYPLSVMDVLEIPENDEYYRVIPYPTDYLGLYKITKEEASLKP 124
Query: 124 CKVRSVQFGQKGIPYINTYDGRTI-------RYPDPLIKANDTIKLDLEENKITDFIKFD 176
++ + + G +N GR I + K DT+ + L +I + I F
Sbjct: 125 VRIENKTIVKGGNLQLNLSGGRNILVKFKEGEKKEVPYKTLDTLLITLPNQEIKEHIPFQ 184
Query: 177 VGNIVMVTGGRNRGRVGIIKNREKHKG-SFETIHIQDALGHEFATRLGNVFTIGKGSKPW 235
+G+ +V G+N G++G I + K G T+ ++ G + T L + +GK KP
Sbjct: 185 IGDYALVIWGKNVGKLGKIVSVNKQWGRKSSTVTLEGKSGRKIQTILDYILIVGK-EKPV 243
Query: 236 VSLP 239
+SLP
Sbjct: 244 ISLP 247
>gi|298674790|ref|YP_003726540.1| 30S ribosomal protein S4e [Methanohalobium evestigatum Z-7303]
gi|298287778|gb|ADI73744.1| Ribosomal protein S4E, central domain protein [Methanohalobium
evestigatum Z-7303]
Length = 240
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 122/235 (51%), Gaps = 5/235 (2%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KR++ P W + K + S GPH + +P+ ++LR+ L E +
Sbjct: 1 MGKHQKRISIPNSWRVAKKSNKWVTTTSPGPHHKEQSMPISVILRDMLGLVDNRSEAKRV 60
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q VLVDGK R D +P G D+++IP+ NE++RLL + K + L L + + KLC
Sbjct: 61 LSQGKVLVDGKPRKDLKFPVGLFDIITIPEMNESYRLLINQKSKLILQKLEESDTN-KLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ + G +N DG + + KA D+I + + + I + +++ GN+ M+
Sbjct: 120 KINDKTTVKSGAIQLNLSDGTNLIGSNDY-KAKDSIIITVPDKNIVNHLEYKEGNLAMIV 178
Query: 185 GGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
GG++ G +G IK K +GS T+ I ++F T V IG+ KP ++L
Sbjct: 179 GGKHTGEIGTIKTITKTRGSEANTVEIS-GQNYDFETIEDYVVVIGE-DKPEINL 231
>gi|327400860|ref|YP_004341699.1| 30S ribosomal protein S4e [Archaeoglobus veneficus SNP6]
gi|327316368|gb|AEA46984.1| 30S ribosomal protein S4e [Archaeoglobus veneficus SNP6]
Length = 231
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 128/232 (55%), Gaps = 5/232 (2%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H KRL+APK + + + K + GPH ++ +PL++++R+ L A T RE ++
Sbjct: 2 HQKRLSAPKTIKVPRKIKKWLVKTAPGPH-NKNAVPLLVIVRDFLGLADTAREARRVIAA 60
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
+LVDG+ R D +P G DV+SIPK +++R+L+D KGR+ + D+ K KL K+
Sbjct: 61 GEILVDGRPRKDYKFPVGLFDVISIPKLGKSYRILFDDKGRYIPKEIGDD--KLKLYKIV 118
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 187
+ + G +N +DG I D K D++ L+L E KI D +KF+ G +VM+ GG
Sbjct: 119 NKTIVKGGKVQLNLFDGTNI-LADNTYKTKDSVLLELPEKKIVDHLKFEEGALVMIVGGT 177
Query: 188 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK-GSKPWVSL 238
+ G +G IK + +GS + ++ T +VF +GK KP + L
Sbjct: 178 HAGEIGRIKEYKVVRGSAPNLVTIESEKGVITTIEDHVFVVGKPDGKPVIDL 229
>gi|383319766|ref|YP_005380607.1| 30S ribosomal protein S4 [Methanocella conradii HZ254]
gi|379321136|gb|AFD00089.1| SSU ribosomal protein S4E [Methanocella conradii HZ254]
Length = 236
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
K HLKR+ AP+ W + K + KPS GPH +PLI+VLR+ L A +E+ IL
Sbjct: 4 KHHLKRVAAPRSWPIAKKTSKWVAKPSPGPHSEEYGMPLIIVLRDMLHLADKAKEIRQIL 63
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
+ VLVDGKVR D +P G DV+SIP+ N N+R++ G+F+L + D A KL K
Sbjct: 64 HEGKVLVDGKVRKDHRFPVGLFDVISIPELNANYRVMIGQDGKFKLVPIAD--AGMKLLK 121
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
+ + G + +DG T+ + D++ L + E I +K++VG++ V
Sbjct: 122 IVNKTMVPGGKIQLGFHDGTTMLASNDY-HTKDSLVLKVPEKSIDQHLKYEVGSMAFVID 180
Query: 186 GRNRGRVGIIKN 197
G++ G +G IK+
Sbjct: 181 GKHAGTLGKIKD 192
>gi|444707815|gb|ELW48989.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 239
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 83/119 (69%)
Query: 29 PKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMD 88
P+ S+G + + L + ++R KYALT V + QR + +DGKVRTD YPAGFMD
Sbjct: 25 PRWSAGAYAGGQREELWAMDKHRFKYALTGDGVKKVCTQRFIEIDGKVRTDIPYPAGFMD 84
Query: 89 VVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 147
V+SI K+ ENFRL+YDTKGRF +H + EEAK+KL KVR + G KGIP++ T+D RT+
Sbjct: 85 VISIDKSGENFRLIYDTKGRFAVHRITPEEAKYKLRKVRKIFEGTKGIPHLVTHDARTM 143
>gi|330508486|ref|YP_004384914.1| 30S ribosomal protein S4E [Methanosaeta concilii GP6]
gi|328929294|gb|AEB69096.1| ribosomal protein S4E [Methanosaeta concilii GP6]
Length = 234
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 117/228 (51%), Gaps = 3/228 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL P W + + + PK S GPH S+E +PL++V+R+ LK RE +
Sbjct: 1 MSRHQKRLTIPVSWPVARKTSVWVPKSSPGPHSSQESMPLLMVIRDMLKLVDNAREAKRV 60
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + VLVDGK + D P G DV+ +P ++ +R+L D KG F L L A+ KL
Sbjct: 61 LYEGKVLVDGKSQKDHKLPIGIFDVIGLPLLDQQYRMLKDEKGMFYLSLLEPGSAR-KLA 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
++ + + +N DG + + K D++ L + E I + I+F VGN+ MV
Sbjct: 120 RIENKTVLRGNKQQLNLSDGSN-KLAEGDYKVGDSLVLSIPEKDIDERIEFKVGNLAMVV 178
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 232
GG++ G+ G IK+ K K S I EF T V+ IG S
Sbjct: 179 GGKHSGQTGKIKDIIKVKSSQPNRVIISG-DKEFETIEEYVYMIGTDS 225
>gi|432331999|ref|YP_007250142.1| ribosomal protein S4E [Methanoregula formicicum SMSP]
gi|432138708|gb|AGB03635.1| ribosomal protein S4E [Methanoregula formicicum SMSP]
Length = 241
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 7/231 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ HLKRLNAP+ W + K F K + GPH + +P+ + LR+ +K A +EV I
Sbjct: 1 MSDHLKRLNAPESWHIAKKANKFITKTAPGPHNA-NAMPIAVWLRDHMKLARNMKEVKQI 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q+ V+V+G+ D G D++++PK N+ +R+L D GR + E AK +LC
Sbjct: 60 LGQKDVIVNGRPCRDPKMGIGIFDIIALPKINKYYRILRDRDGRHVSVEIDAEAAKTRLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE-EN--KITDFIKFDVGNIV 181
KV++ G +N DG I D K+ D++ + LE EN KI D F VGN+
Sbjct: 120 KVKNKTTIAGGKVQLNLRDGANI-LADNTYKSGDSVVVSLEPENRFKIVDHFPFVVGNMA 178
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFET-IHIQDA-LGHEFATRLGNVFTIGK 230
M+ GG++ G V I + K GS I +QD G +F T ++ +GK
Sbjct: 179 MIIGGKHSGNVARIVDIVKMPGSVPNKIILQDEKTGTKFDTIAPYIYMVGK 229
>gi|410670339|ref|YP_006922710.1| 30S ribosomal protein S4e [Methanolobus psychrophilus R15]
gi|409169467|gb|AFV23342.1| 30S ribosomal protein S4e [Methanolobus psychrophilus R15]
Length = 236
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 5/227 (2%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KR++ P W + K + GPH ++ +PL +VLR+ L E +
Sbjct: 1 MGKHQKRISVPNSWQISKKSNKWITATRPGPHNKQQSIPLAVVLRDMLCVVDNRAEAKRV 60
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + VLVDG +R D +P G +DV+S+P N +R+L D KGR LH ++ E KLC
Sbjct: 61 LSEGKVLVDGVIRKDLRFPVGLLDVISMPVENVAYRVLLDGKGRLELHKIK-ESTDNKLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
++ + G+ +N DG I + D+I L L + K+ IK+ GN+ ++
Sbjct: 120 RINGKTVLKGGVIQLNLNDGSNIIGSNDY-NTKDSIILSLPDKKVVQHIKYQAGNLALIV 178
Query: 185 GGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGK 230
GG++ G +G IK + S T+ I ++F T V IG+
Sbjct: 179 GGKHTGSIGTIKEINAVRSSRHNTVFISG--DYDFETIEDYVVVIGE 223
>gi|20089954|ref|NP_616029.1| 30S ribosomal protein S4 [Methanosarcina acetivorans C2A]
gi|22096115|sp|Q8TRT5.1|RS4E_METAC RecName: Full=30S ribosomal protein S4e
gi|19914915|gb|AAM04509.1| ribosomal protein S4e [Methanosarcina acetivorans C2A]
Length = 235
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 6/232 (2%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H KRL+ PK W + K G + GPH LPL +++R+ LK RE IL +
Sbjct: 3 HQKRLSVPKSWKVGKKGNKWISTTRPGPHSQARSLPLGIIIRDILKLVDNSREGKRILSE 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
VLVDG R D +P G DV+++P NE +R+L D KGR LH L + KLC++
Sbjct: 63 GKVLVDGIPRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLTLHKLNETNVN-KLCRIN 121
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 187
+ + G +N DG I + D++ L + + ++ +KF+VGN+ MV GG+
Sbjct: 122 NKTTVKGGKFQLNLNDGTNIIGSNEY-GTKDSLILSIPDKQVVKHLKFEVGNLAMVVGGQ 180
Query: 188 NRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
+ G G I++ RE T+ I +F T V IG+ KP + L
Sbjct: 181 HSGETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|15897612|ref|NP_342217.1| 30S ribosomal protein S4 [Sulfolobus solfataricus P2]
gi|284174936|ref|ZP_06388905.1| 30S ribosomal protein S4e [Sulfolobus solfataricus 98/2]
gi|384434225|ref|YP_005643583.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
solfataricus 98/2]
gi|11134765|sp|Q9UX94.1|RS4E_SULSO RecName: Full=30S ribosomal protein S4e
gi|6015771|emb|CAB57598.1| ribosomal protein S4E [Sulfolobus solfataricus P2]
gi|13813875|gb|AAK41007.1| SSU ribosomal protein S4E (rps4E) [Sulfolobus solfataricus P2]
gi|261602379|gb|ACX91982.1| Ribosomal protein S4E, central domain protein [Sulfolobus
solfataricus 98/2]
Length = 239
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 116/229 (50%), Gaps = 6/229 (2%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H+ R AP M+ K + +P++GPH + +PL +V+R+ LK A T RE I+
Sbjct: 3 HITRFEAPWFLMISKKQYKWTVRPNAGPHSIEKSIPLAVVIRDYLKLAGTIREAKHIIFD 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
VLVDGKVR D YP G MD+VSIP + FR+L D R + +EA++K ++
Sbjct: 63 GKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVLPDNVRFMRFSKISADEARYKYVRII 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
+ ++G +N DGR I K T+K++L +I D + +
Sbjct: 123 NKTTIKEGRIQLNLEDGRNILVDKETAKNFKTLMTLKIELPSQQILDSFTISERSYAIFV 182
Query: 185 GGRNRGRVGIIKNREKHK---GSFETIHIQDALGHEFATRLGNVFTIGK 230
GGRN G GI+KN K + I ++ G+ + T + NV +IG+
Sbjct: 183 GGRNVGIHGIVKNINLSKFKSRKYSVITLESRDGNTYQTNIMNVMSIGR 231
>gi|159042387|ref|YP_001541639.1| 30S ribosomal protein S4e [Caldivirga maquilingensis IC-167]
gi|189045348|sp|A8MB20.1|RS4E_CALMQ RecName: Full=30S ribosomal protein S4e
gi|157921222|gb|ABW02649.1| Ribosomal protein S4E, central [Caldivirga maquilingensis IC-167]
Length = 237
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 3/228 (1%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
HL+R +P+ W +++ G ++ KPS GPH + +PL ++LR+ YA T RE I+ +
Sbjct: 3 HLRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGK 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
+V VDGKVR D YP G MDV+ + NE +R++ D R + EA K+C++
Sbjct: 63 GYVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIE 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDT---IKLDLEENKITDFIKFDVGNIVMVT 184
+ G +N +DGR I + +T + ++LE+ K+ D+ V+
Sbjct: 123 DKTMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAF 182
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 232
G N GR G + N + + I A EF T L + IGK S
Sbjct: 183 NGVNVGRHGTLINWVRSFRKRDAIATVKAKDSEFRTVLNYLLVIGKES 230
>gi|227827703|ref|YP_002829483.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.14.25]
gi|227830399|ref|YP_002832179.1| 30S ribosomal protein S4e [Sulfolobus islandicus L.S.2.15]
gi|229579218|ref|YP_002837616.1| 30S ribosomal protein S4e [Sulfolobus islandicus Y.G.57.14]
gi|229582030|ref|YP_002840429.1| 30S ribosomal protein S4e [Sulfolobus islandicus Y.N.15.51]
gi|229584907|ref|YP_002843409.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.16.27]
gi|238619874|ref|YP_002914700.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.16.4]
gi|284997906|ref|YP_003419673.1| Ribosomal protein S4E, central [Sulfolobus islandicus L.D.8.5]
gi|385773375|ref|YP_005645941.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
islandicus HVE10/4]
gi|385776013|ref|YP_005648581.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
islandicus REY15A]
gi|259495262|sp|C3N5T9.1|RS4E_SULIA RecName: Full=30S ribosomal protein S4e
gi|259495263|sp|C4KHG8.1|RS4E_SULIK RecName: Full=30S ribosomal protein S4e
gi|259495264|sp|C3MQ71.1|RS4E_SULIL RecName: Full=30S ribosomal protein S4e
gi|259495265|sp|C3MVJ0.1|RS4E_SULIM RecName: Full=30S ribosomal protein S4e
gi|259495266|sp|C3NH97.1|RS4E_SULIN RecName: Full=30S ribosomal protein S4e
gi|259495267|sp|C3NEF5.1|RS4E_SULIY RecName: Full=30S ribosomal protein S4e
gi|227456847|gb|ACP35534.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus L.S.2.15]
gi|227459499|gb|ACP38185.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.14.25]
gi|228009932|gb|ACP45694.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus Y.G.57.14]
gi|228012746|gb|ACP48507.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus Y.N.15.51]
gi|228019957|gb|ACP55364.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.16.27]
gi|238380944|gb|ACR42032.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.16.4]
gi|284445801|gb|ADB87303.1| Ribosomal protein S4E, central [Sulfolobus islandicus L.D.8.5]
gi|323474761|gb|ADX85367.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus REY15A]
gi|323477489|gb|ADX82727.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus HVE10/4]
Length = 239
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 115/229 (50%), Gaps = 6/229 (2%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H+ R P ++ K + +P++GPH + +PL +V+R+ LK A T RE I+
Sbjct: 3 HITRFETPWFLVISKKQYKWTVRPNAGPHPIEKSIPLAVVIRDYLKLAETVREAKHIIFD 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
VLVDGKVR D YP G MD+VSIP + FR++ D RL + +EA +K ++
Sbjct: 63 GKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVIPDNVRFMRLSKISADEAHYKYVRIM 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKAND---TIKLDLEENKITDFIKFDVGNIVMVT 184
+ + G +N DGR I K+ T+K++L I D G+ +
Sbjct: 123 NKTTVKGGSIQLNLEDGRNILVDKETAKSFKTLMTLKIELPSQNIVDSFIISEGSYAIFV 182
Query: 185 GGRNRGRVGIIKNREKHKG---SFETIHIQDALGHEFATRLGNVFTIGK 230
GG+N G G++KN K + I ++ G+ + T L NV +IG+
Sbjct: 183 GGKNVGIHGVVKNINLSKFKSRKYSVITLESKDGNTYQTNLMNVMSIGR 231
>gi|444721894|gb|ELW62603.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 188
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
KVR + G KGI ++ T+D TI PDPLIK N TI+ D++ K+TD I FD G++ MVT
Sbjct: 39 KVRQIFVGTKGILHLVTHDAPTICSPDPLIKVNTTIQTDVQTGKVTDCIVFDTGSLCMVT 98
Query: 185 GGRNRGRVGIIKNREKH-KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 243
GG + GR+G++ +RE+ F+ +H++DA + FATRL ++F IGK +KPW+S P
Sbjct: 99 GGADLGRIGVLTSRERDILAFFDVVHVKDANDNSFATRLLSIFVIGKDNKPWISPPTSPW 158
Query: 244 IK 245
+K
Sbjct: 159 LK 160
>gi|21228238|ref|NP_634160.1| 30S ribosomal protein S4 [Methanosarcina mazei Go1]
gi|452210673|ref|YP_007490787.1| SSU ribosomal protein S4e [Methanosarcina mazei Tuc01]
gi|23822141|sp|Q8PV38.1|RS4E_METMA RecName: Full=30S ribosomal protein S4e
gi|20906694|gb|AAM31832.1| SSU ribosomal protein S4E [Methanosarcina mazei Go1]
gi|452100575|gb|AGF97515.1| SSU ribosomal protein S4e [Methanosarcina mazei Tuc01]
Length = 235
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 116/232 (50%), Gaps = 6/232 (2%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H KRL+ PK W + + G + GPH LPL L++R+ LK RE IL +
Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSE 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
VLVDG R D +P G DV+++P NE +R+L D KGR L+ L + KLC++
Sbjct: 63 GKVLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLNETNVN-KLCRIN 121
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 187
+ + G +N DG I + D++ L + + + +KF+VGN+ MV GG+
Sbjct: 122 NKTTVKGGKIQLNLNDGTNILGSNDY-GTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQ 180
Query: 188 NRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
+ G G I++ RE T+ I +F T V IG+ KP + L
Sbjct: 181 HSGETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|448519974|ref|XP_003868191.1| hypothetical protein CORT_0B10535, partial [Candida orthopsilosis
Co 90-125]
gi|380352530|emb|CCG22756.1| hypothetical protein CORT_0B10535, partial [Candida
orthopsilosis]
Length = 78
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/76 (77%), Positives = 62/76 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +APK S GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPKSSPGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDGKV 76
V AILMQ+HV VDGKV
Sbjct: 61 VKAILMQQHVQVDGKV 76
>gi|170516825|gb|ACB15227.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 231
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 9/229 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
+ H+KRL P+ W L + + KP++G H C+PL LVLR+ L A T RE IL
Sbjct: 3 RSHIKRLVMPRSWPLPRKSSIWVQKPNAGGHSIENCMPLALVLRDVLGVAHTRREAKHIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
R V+VDG++ TD G MDV+S+ + +NFR + DT G+ R + A K+C+
Sbjct: 63 HSRQVMVDGRIETDDGRGVGLMDVLSVGE--KNFRCVLDTNGKLRYRPIPKNAAGSKICR 120
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
V + ++ +DGR + D K+ D++ + L E +IT + F G +T
Sbjct: 121 VTGKTTIRGAKTQLHLHDGRNLLMDDASAYKSGDSVIISLPEQQITSHLPFTEGAQSYMT 180
Query: 185 GGRNRGRVGIIKNRE-KHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 232
GG + G + ++ + K + D F T VF IG S
Sbjct: 181 GGSHTGEIATVRGHDVKRSSKANEVQFDD-----FLTIADYVFVIGSES 224
>gi|379994271|gb|AFD22762.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 84
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 64/79 (81%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
M RG +KHLKRLNAP WMLDKL G FAP+PS GPHK RE LPL+++LRNRLKYALT RE
Sbjct: 1 MVRGPRKHLKRLNAPSSWMLDKLSGTFAPRPSPGPHKLRESLPLVVLLRNRLKYALTRRE 60
Query: 61 VIAILMQRHVLVDGKVRTD 79
VI I+ QR + VDGK RT+
Sbjct: 61 VIQIVKQRLLKVDGKARTE 79
>gi|344247051|gb|EGW03155.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 176
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 89/140 (63%), Gaps = 1/140 (0%)
Query: 40 ECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENF 99
+CLPL + LRNRL+ A+ + + I Q + VDGKV TD YPAGF + ++I K+++N
Sbjct: 36 QCLPLDVFLRNRLRCAV-MEDKMKISKQCVIKVDGKVTTDVAYPAGFTNAITINKSSKNL 94
Query: 100 RLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDT 159
L+ DTKG F +H + +EAK KLC++R V G KGI + +D T+ YP+PLIK N T
Sbjct: 95 CLVCDTKGHFIMHHITSKEAKNKLCRMRMVFVGTKGILNVMIHDKHTVHYPNPLIKVNGT 154
Query: 160 IKLDLEENKITDFIKFDVGN 179
+ L+ + I + KF+ N
Sbjct: 155 VLDLLDTDNIIEVFKFNTDN 174
>gi|396468642|ref|XP_003838223.1| predicted protein [Leptosphaeria maculans JN3]
gi|312214790|emb|CBX94744.1| predicted protein [Leptosphaeria maculans JN3]
Length = 81
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 66/81 (81%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
MQR V VDGKVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL K
Sbjct: 1 MQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGK 60
Query: 126 VRSVQFGQKGIPYINTYDGRT 146
V+ VQ G+ GIPY+ T+D RT
Sbjct: 61 VKRVQLGKGGIPYLVTHDART 81
>gi|73667650|ref|YP_303665.1| 30S ribosomal protein S4 [Methanosarcina barkeri str. Fusaro]
gi|121725704|sp|Q46GA7.1|RS4E_METBF RecName: Full=30S ribosomal protein S4e
gi|72394812|gb|AAZ69085.1| SSU ribosomal protein S4E [Methanosarcina barkeri str. Fusaro]
Length = 235
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 113/232 (48%), Gaps = 6/232 (2%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H KRL+ P+ W K G + GPH LPL +++R+ LK RE IL +
Sbjct: 3 HQKRLSIPRSWKAGKKGYKWVSTTRPGPHSQARSLPLGIIIRDILKLVDNSREGKRILSE 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
VLVDG R D +P G DV+++P NE +R+ D KGR LH L KLC++
Sbjct: 63 GKVLVDGIPRKDLRFPVGLFDVITLPLVNETYRMFQDEKGRLALHKLNATNVN-KLCRIN 121
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 187
+ + G +N DG I + D++ L L + +I ++F VGN+ MV GG+
Sbjct: 122 NKTTLKGGKVQLNLNDGTNILGSNEY-STKDSLILSLPDKQIVKHLQFKVGNLAMVVGGQ 180
Query: 188 NRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
+ G +G I + RE T+ I +F T V IG+ KP + L
Sbjct: 181 HSGEIGKITEIREVKSSRHNTVAISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|91772095|ref|YP_564787.1| 30S ribosomal protein S4e [Methanococcoides burtonii DSM 6242]
gi|91711110|gb|ABE51037.1| SSU ribosomal protein S4E [Methanococcoides burtonii DSM 6242]
Length = 236
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 6/233 (2%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KR++ PK W + K + GPH + +PL ++LR+ L E +
Sbjct: 1 MATHQKRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRV 60
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +VLVDG R D +P G MD+++IP N +R++ D K R L+ L D KLC
Sbjct: 61 LSEGNVLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKL-DGTGADKLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
++ ++G + DG I + D+I L + + K+ IK++VGN+ M+
Sbjct: 120 RIEGKTSIKEGKIQMRLNDGVNIIGSNNY-NTKDSIILSVPDKKVVKHIKYEVGNLAMIV 178
Query: 185 GGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGSKPWV 236
GG + G VG IK K S T+ I + EF T VF IG+ SKP +
Sbjct: 179 GGSHAGEVGSIKEINTVKSSKNNTVTISGEI--EFETIEDYVFVIGE-SKPEI 228
>gi|305662603|ref|YP_003858891.1| 30S ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
gi|304377172|gb|ADM27011.1| SSU ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
Length = 252
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 128/252 (50%), Gaps = 16/252 (6%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G +HLKRL AP W + + + KPS GPH +PL++++R+ L A T R
Sbjct: 1 MARMGGSRHLKRLAAPLFWPILRKEYKWVVKPSPGPHPVSRSIPLLILVRDVLNIAKTSR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLL-YDTKGRFRLHSLRDEE 118
E I+ + VDG R D +P G MD +SIP+ + R++ Y TK + + ++ EE
Sbjct: 61 EAKRIIFDGKIYVDGVQRRDYKFPIGPMDSISIPEIDMYLRMVPYPTKYLWYI-NISKEE 119
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPL-------IKANDTIKLDLEENKI 169
A KL ++ + + G + T+DGR IR DP K DT+ +++ +I
Sbjct: 120 ACLKLVRIENKLTVKNGHIQLGTHDGRNILIRVKDPRNPVEAMNYKTLDTLLIEVPSQRI 179
Query: 170 TDFIKFDVGNIVMVTGGRNRGRVG---IIKNREKHKGSFETIHIQDALGHEFATRLGNVF 226
I D+G +V GRN GR+G I+ RE K + ++D GH F T L V
Sbjct: 180 IQHIPLDIGKYAIVIHGRNVGRLGKILSIEVREGMKRRRALVTMEDINGHRFQTILDYVM 239
Query: 227 TIGKGSKPWVSL 238
+G KP + L
Sbjct: 240 VVG-DEKPVIKL 250
>gi|355571371|ref|ZP_09042623.1| Ribosomal protein S4E, central domain protein [Methanolinea tarda
NOBI-1]
gi|354825759|gb|EHF09981.1| Ribosomal protein S4E, central domain protein [Methanolinea tarda
NOBI-1]
Length = 241
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 120/231 (51%), Gaps = 7/231 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ HLKRLNAP W + K F K S GPH + +P+ + LR+ + A+ +EV I
Sbjct: 1 MGDHLKRLNAPDSWHVAKKTSKFIAKTSPGPHNA-NAMPVAVWLRDHMHLAVNAKEVRQI 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q+ V+++G+ + G D++SIP+ +FR+L D KGR + + E AK +L
Sbjct: 60 LQQKEVIINGRPCRNPRMGIGIFDIISIPRIGRHFRILRDKKGRHKTIEIDAEAAKSRLA 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE-ENK--ITDFIKFDVGNIV 181
K+R+ G +N G + D D+I L LE EN+ I D F VGN+
Sbjct: 120 KIRNKTIVPGGKVQLNLRFGANV-IADNRYHPGDSIVLSLEPENRFAILDHFPFAVGNMA 178
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFET-IHIQD-ALGHEFATRLGNVFTIGK 230
MV GGR+ G+V I EK GS + ++D A G F T ++ +G+
Sbjct: 179 MVIGGRHSGKVARIVGIEKVPGSVPNRVILEDPADGSRFETIDEYIYMVGR 229
>gi|356499199|ref|XP_003518429.1| PREDICTED: uncharacterized protein LOC100789816 [Glycine max]
Length = 297
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/57 (94%), Positives = 55/57 (96%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTY 58
ARGLKKHLKRLNA KHWMLDKLGGAFAPKPSSG HKSRECLPLIL+LRNRLKYALTY
Sbjct: 151 ARGLKKHLKRLNARKHWMLDKLGGAFAPKPSSGSHKSRECLPLILILRNRLKYALTY 207
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
A GLKKHLKRLNAPKHWMLDKLGGAFA +EC IL R+ +A + E+
Sbjct: 16 ATGLKKHLKRLNAPKHWMLDKLGGAFASV------NQKECTD-ILTAYPRIMHANNFFEL 68
Query: 62 IAILMQ 67
++Q
Sbjct: 69 AEAILQ 74
>gi|219881173|gb|ACL51789.1| putative ribosomal protein S4 [Picea abies]
gi|219881175|gb|ACL51790.1| putative ribosomal protein S4 [Picea glauca]
Length = 71
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 59/64 (92%)
Query: 193 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 252
G+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKG+KPWVSLPKGKG+KLSIIEEA
Sbjct: 1 GVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIEEA 60
Query: 253 RKRQ 256
RKR
Sbjct: 61 RKRH 64
>gi|119719161|ref|YP_919656.1| 30S ribosomal protein S4e [Thermofilum pendens Hrk 5]
gi|119524281|gb|ABL77653.1| SSU ribosomal protein S4E [Thermofilum pendens Hrk 5]
Length = 251
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 122/246 (49%), Gaps = 10/246 (4%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREV 61
+G +HL+R AP W + + + KPS GPH +P+ +VLR+ YA T +E
Sbjct: 5 VKGSLRHLRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEA 64
Query: 62 IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKF 121
IL R + VDG+V TD +P G MDV+ I + +R++ D + R ++ EEA +
Sbjct: 65 RRILASRVIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGY 124
Query: 122 KLCKVRSVQFGQKGIPYINTYDGRTI-------RYPDPL-IKANDTIKLDLEENKITDFI 173
KL ++R + G +DGR + Y + K D + + + I +
Sbjct: 125 KLAQIRRKMTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPRQSIVSHV 184
Query: 174 KFDVGNIVMVTGGRNRGRVGIIKN-REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 232
F+VG + +V GRN G +G I ++ K S + ++DA G + T L V +GK
Sbjct: 185 PFEVGTLAIVVDGRNVGFMGRINAIQQVFKRSRALVELEDASGAKSRTILQYVLPVGK-E 243
Query: 233 KPWVSL 238
KP V++
Sbjct: 244 KPLVTV 249
>gi|218117277|emb|CAQ37766.1| 40S ribosomal protein S4 [Echinorhynchus truttae]
Length = 83
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 67/83 (80%)
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
V VQ G KG+P+++T+DGRTIRYPDP IK +DTIK+++E KI DFIKF+VGNI M+TG
Sbjct: 1 VNHVQTGPKGVPFLSTHDGRTIRYPDPHIKVHDTIKINVETGKIEDFIKFEVGNICMITG 60
Query: 186 GRNRGRVGIIKNREKHKGSFETI 208
G N GR+G + +REKH GSFE I
Sbjct: 61 GNNLGRIGALISREKHPGSFEII 83
>gi|413936106|gb|AFW70657.1| putative protein disulfide isomerase family protein isoform 1 [Zea
mays]
gi|413936107|gb|AFW70658.1| putative protein disulfide isomerase family protein isoform 2 [Zea
mays]
Length = 84
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 148 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 207
RYPDPLIKA DTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKG FET
Sbjct: 14 RYPDPLIKAIDTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGIFET 73
Query: 208 IHI 210
IH+
Sbjct: 74 IHM 76
>gi|336477149|ref|YP_004616290.1| 30S ribosomal protein S4 [Methanosalsum zhilinae DSM 4017]
gi|335930530|gb|AEH61071.1| Ribosomal protein S4E, central domain protein [Methanosalsum
zhilinae DSM 4017]
Length = 236
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 2/200 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KR++ PK W + K +A GPH + +P+ +VLR+ L+ E +
Sbjct: 1 MGKHQKRISVPKSWQIPKKANKWALSTRPGPHHKAQSVPIGIVLRDMLELVDNSSEAKKV 60
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L +LVDG VR D +P G D+++IP N ++ +L D KGR L+ L+D KLC
Sbjct: 61 LSDGKILVDGTVRKDVRFPIGLFDIITIPLNNLSYIVLLDRKGRLVLNQLQDITTT-KLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ + G +N DG I K ND++ + L + +I I++ GN+ M+
Sbjct: 120 KINGKTTVKGGKVQLNLSDGTNIIATSEY-KPNDSVIISLPDKEIVKHIEYKEGNLAMIV 178
Query: 185 GGRNRGRVGIIKNREKHKGS 204
GG + G +G I++ K + S
Sbjct: 179 GGTHSGELGTIRSINKVRSS 198
>gi|307354335|ref|YP_003895386.1| 30S ribosomal protein S4E [Methanoplanus petrolearius DSM 11571]
gi|307157568|gb|ADN36948.1| Ribosomal protein S4E, central domain protein [Methanoplanus
petrolearius DSM 11571]
Length = 242
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H+KRL +P W + K F K + GPH +R +P+ + LR+ + AL +EV I
Sbjct: 1 MSNHMKRLTSPTGWRIAKKENKFVIKTAPGPH-NRNSMPMAVWLRDHMGLALNMKEVKKI 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L +R V+++G TD G D++SIPK ++ +R+L D KG + + ++AK +LC
Sbjct: 60 LKERSVILNGVPCTDSKLGIGVFDIISIPKVDKYYRILRDKKGDYVSIPISADDAKTRLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN---KITDFIKFDVGNIV 181
KV + + G +N G + K D+I + LE + K+TD F G++
Sbjct: 120 KVENKTIVKGGKIQLNLRYGANLIVDSQDYKPKDSIVIGLEGDNRFKVTDHYPFAEGSVA 179
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFET-IHIQDA-LGHEFATRLGNVFTIG 229
M+ GG + G++G I + GS ++++D G +F T +F IG
Sbjct: 180 MIIGGSHSGKIGRISKIDTIPGSISNRVYLKDEKSGEDFDTIEEYIFVIG 229
>gi|315427720|dbj|BAJ49316.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
Length = 238
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 114/239 (47%), Gaps = 12/239 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
HLK L AP+H+ K F PS GPH ++ +PL++ +R+ L YA ++ Q
Sbjct: 3 HLKTLAAPRHY--PKRATVFTVAPSPGPHAKKKSIPLLIAVRDLLNYADNAHTARRLIKQ 60
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
+VDG+V D +P G MDV+SIP+ EN+R+L L EEA FK+C+V
Sbjct: 61 GKFMVDGRVVKDPRFPLGLMDVLSIPELGENYRVLIKPGKGLTLAKTSSEEAGFKICQVV 120
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPL------IKANDTIKLDLEENKITDFIKFDVGNIV 181
+ G I +DGRTI + + IK DT+K+ + +I + I D G
Sbjct: 121 RKNHVRGGALMIGLHDGRTILFRGEMLDKGRAIKTLDTLKIAVPSQEILETISLDNGVYA 180
Query: 182 MVTGGRNRGRVGIIK--NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
+ G G G I RE T ++ G T L N+ +G G PW++L
Sbjct: 181 YIHSGARAGLHGKIMRIRREVVFPDKPTATVETGQG-TVTTLLRNLMPVG-GEAPWITL 237
>gi|329009625|gb|AEB71432.1| Y-linked ribosomal protein S4 [Bubalus bubalis]
Length = 77
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 62/75 (82%)
Query: 72 VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 131
+DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR +
Sbjct: 3 IDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFV 62
Query: 132 GQKGIPYINTYDGRT 146
G KGIP++ T+D RT
Sbjct: 63 GTKGIPHLVTHDART 77
>gi|315425862|dbj|BAJ47515.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
gi|343484677|dbj|BAJ50331.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
Length = 238
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 114/239 (47%), Gaps = 12/239 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
HLK L AP+H+ K F PS GPH ++ +PL++ +R+ L YA ++ Q
Sbjct: 3 HLKTLAAPRHY--PKKATVFTVAPSPGPHAKKKSIPLLIAVRDLLNYADNAHTARRLIKQ 60
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
+VDG+V D +P G MDV+SIP+ EN+R+L L EEA FK+C+V
Sbjct: 61 GKFMVDGRVVKDPRFPLGLMDVLSIPELGENYRVLIKPGKGLTLAKTSSEEAGFKICQVV 120
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPL------IKANDTIKLDLEENKITDFIKFDVGNIV 181
+ G I +DGRTI + + IK DT+K+ + +I + I D G
Sbjct: 121 RKNHVRGGALMIGLHDGRTILFRGEMLDKGRAIKTLDTLKIAVPSQEILETISLDNGVYA 180
Query: 182 MVTGGRNRGRVGIIK--NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
+ G G G I RE T ++ G T L N+ +G G PW++L
Sbjct: 181 YIHSGARAGLHGKIMRIRREVVFPDKPTATVETGQG-TVTTLLRNLMPVG-GEAPWITL 237
>gi|396468646|ref|XP_003838224.1| predicted protein [Leptosphaeria maculans JN3]
gi|312214791|emb|CBX94745.1| predicted protein [Leptosphaeria maculans JN3]
Length = 83
Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats.
Identities = 50/80 (62%), Positives = 63/80 (78%)
Query: 146 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 205
+IRYPDP IK NDT+K+DL KI+DFIKFD G +VMVTGGRN GRVG+I +RE+H G F
Sbjct: 3 SIRYPDPAIKVNDTVKIDLSTGKISDFIKFDTGVLVMVTGGRNMGRVGVITHRERHDGGF 62
Query: 206 ETIHIQDALGHEFATRLGNV 225
+H++DA+ +EF TR NV
Sbjct: 63 NIVHLKDAVDNEFTTRETNV 82
>gi|215809334|gb|ACJ70374.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809336|gb|ACJ70375.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809338|gb|ACJ70376.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809340|gb|ACJ70377.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809342|gb|ACJ70378.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809344|gb|ACJ70379.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809346|gb|ACJ70380.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809348|gb|ACJ70381.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809350|gb|ACJ70382.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809352|gb|ACJ70383.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809354|gb|ACJ70384.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809356|gb|ACJ70385.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809358|gb|ACJ70386.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809360|gb|ACJ70387.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809362|gb|ACJ70388.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809364|gb|ACJ70389.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809366|gb|ACJ70390.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809368|gb|ACJ70391.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809370|gb|ACJ70392.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809372|gb|ACJ70393.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809374|gb|ACJ70394.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809376|gb|ACJ70395.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809378|gb|ACJ70396.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809380|gb|ACJ70397.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809382|gb|ACJ70398.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809384|gb|ACJ70399.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809386|gb|ACJ70400.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809388|gb|ACJ70401.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809390|gb|ACJ70402.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809392|gb|ACJ70403.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809394|gb|ACJ70404.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809396|gb|ACJ70405.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809398|gb|ACJ70406.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809400|gb|ACJ70407.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809402|gb|ACJ70408.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809404|gb|ACJ70409.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809406|gb|ACJ70410.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809408|gb|ACJ70411.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809410|gb|ACJ70412.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809412|gb|ACJ70413.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|219881163|gb|ACL51784.1| putative ribosomal protein S4 [Pinus contorta]
gi|219881165|gb|ACL51785.1| putative ribosomal protein S4 [Pinus nigra]
gi|219881167|gb|ACL51786.1| putative ribosomal protein S4 [Pinus pinaster]
gi|219881169|gb|ACL51787.1| putative ribosomal protein S4 [Pinus ponderosa]
gi|219881171|gb|ACL51788.1| putative ribosomal protein S4 [Pinus resinosa]
Length = 71
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 58/63 (92%)
Query: 193 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 252
G IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKG+KPWVSLPKGKG+KLSII+EA
Sbjct: 1 GTIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIDEA 60
Query: 253 RKR 255
RKR
Sbjct: 61 RKR 63
>gi|219851119|ref|YP_002465551.1| 30S ribosomal protein S4e [Methanosphaerula palustris E1-9c]
gi|219545378|gb|ACL15828.1| Ribosomal protein S4E, central domain protein [Methanosphaerula
palustris E1-9c]
Length = 241
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 7/231 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +HLKRL AP+ W + K F K + GPH + LP+ + LR+ + +A T +EV I
Sbjct: 1 MSEHLKRLVAPRAWHIAKKTNTFISKTAPGPHNG-QALPIGVWLRDTMGFAQTLKEVKQI 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L +R V+V+G+ D G D+++IPK + +R+L GR S+ E+AK +LC
Sbjct: 60 LNERSVIVNGRPCRDPKMGIGIFDIIAIPKMGKYYRILLAKNGRLVAISIEAEDAKSRLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENK---ITDFIKFDVGNIV 181
KV+ G +N G + + D++ L LE + + D + GN+
Sbjct: 120 KVQDKTIVSGGKTQVNLTYGANV-LTEEACSPKDSLVLSLEPEQRFTVLDHFPYKEGNMA 178
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL--GHEFATRLGNVFTIGK 230
MV GGR+ G++G I+ GS I + + G +F T ++ +G+
Sbjct: 179 MVIGGRHSGKIGKIQTITTVMGSTPNTVILEEVGTGTQFDTIDSYIYMVGR 229
>gi|379003364|ref|YP_005259036.1| 30S ribosomal protein S4E [Pyrobaculum oguniense TE7]
gi|375158817|gb|AFA38429.1| Ribosomal protein S4E [Pyrobaculum oguniense TE7]
Length = 238
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
HL+R AP W + K GG + KPS GPH LPL +V+R+ L+YA T RE I+
Sbjct: 3 HLRRSLAPYWWPIPRKAGGVWVVKPSPGPHSFAYSLPLAIVIRDVLRYAKTLREARYIVS 62
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+ ++ VDG VR D +P G MDV+ I T E +R++ D + L S+ EA KL +V
Sbjct: 63 RGYIKVDGVVRKDYRFPVGLMDVIEIVPTGEVYRVVPDQDRYYNLLSIPSSEASLKLLRV 122
Query: 127 RSVQFGQKGIPYINTYDGRT-IRYPD--PLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
G ++ +DGR I PD IK DTI DLE I I +G + +V
Sbjct: 123 EGKTTVNGGRLQLHFHDGRNLITSPDMGAKIKTFDTILYDLENKSIKTHIPMKLGVMAVV 182
Query: 184 TGGRNRGRVG 193
T G N G G
Sbjct: 183 THGSNVGFSG 192
>gi|330835813|ref|YP_004410541.1| 30S ribosomal protein S4e [Metallosphaera cuprina Ar-4]
gi|329567952|gb|AEB96057.1| 30S ribosomal protein S4e [Metallosphaera cuprina Ar-4]
Length = 241
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 114/231 (49%), Gaps = 8/231 (3%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H+ RL AP K + + S GPH R +PL L++R+ L +A T +E I+
Sbjct: 3 HITRLEAPWFLKASKKEYKWTVRASPGPHPLRRSIPLGLLVRDYLSFATTLKESKKIISD 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
VLVDG+VR D YP G MDV+SIP ++R++ D + + +EEAKFKL ++
Sbjct: 63 GKVLVDGRVRRDYKYPVGLMDVISIPHAGLHYRIVPDKARLLKPIKISEEEAKFKLVRLT 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYPD-----PLIKANDTIKLDLEENKITDFIKFDVGNIVM 182
+ G+ ++ DGR I + I T+K+ + I + G VM
Sbjct: 123 GKSIIKGGLYQLHLEDGRNILLGNENSELSKIPTLSTLKVSIPVQSILSVYQMREGAQVM 182
Query: 183 VTGGRNRGRVGIIKNRE--KHKG-SFETIHIQDALGHEFATRLGNVFTIGK 230
GG+N G +G +K + +K + + I++ G E+ T L N IG+
Sbjct: 183 AIGGKNAGAIGQVKKIQIAPYKAKKYSIVIIRNPSGAEYETNLANAMVIGE 233
>gi|414872252|tpg|DAA50809.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 255
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 79/145 (54%), Gaps = 49/145 (33%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
+QRHVLVDGK M S+ +T TK RLH +RDE+AKFKLCK
Sbjct: 152 LQRHVLVDGK-----------MPFPSLRQTG--------TKRCLRLHPIRDEDAKFKLCK 192
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
ANDTIK+DLE NKI DF KFDVGN+VMVTG
Sbjct: 193 ------------------------------ANDTIKIDLETNKIMDFFKFDVGNVVMVTG 222
Query: 186 GRNRGRVGIIKNREKHKGSFETIHI 210
GRN GRVG IKN EKHKGSFE I +
Sbjct: 223 GRNIGRVGEIKNWEKHKGSFEVIDV 247
>gi|385805552|ref|YP_005841950.1| 30S ribosomal protein S4e [Fervidicoccus fontis Kam940]
gi|383795415|gb|AFH42498.1| 30S ribosomal protein S4e [Fervidicoccus fontis Kam940]
Length = 248
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 121/253 (47%), Gaps = 21/253 (8%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G KHL+ +AP W + +A KPS GPH +PL +VLR+ LKYA T R
Sbjct: 1 MARMGGSKHLRSYSAPDFWPISTKERFWAIKPSPGPHSLSSSIPLGIVLRDYLKYARTKR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
EVI L V VDGKVR D YP G MDV+ I ++ FR + + + EEA
Sbjct: 61 EVIRALSMGLVKVDGKVRKDYKYPVGAMDVIEIVPSSLFFRAVPNMDKFISFVEIPKEEA 120
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-------------TIKLDLEE 166
K ++ + G +N +DG I LIK +D T+ + + E
Sbjct: 121 SIKPLRIENKTTVNHGHIQLNLFDGSNI-----LIKVSDPKNPTEVPYRTLSTVIVKIPE 175
Query: 167 NKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNV 225
+I D+I + G ++ GG+N G +G +K K + + + I+ G T L V
Sbjct: 176 REIIDYIPLEEGVYAIIFGGKNTGIMGKVKEIRKGMKRYRSLVVIETDDGSIAQTSLDYV 235
Query: 226 FTIGKGSKPWVSL 238
IG+ KP + L
Sbjct: 236 LAIGR-EKPIIKL 247
>gi|374630578|ref|ZP_09702963.1| SSU ribosomal protein S4E [Methanoplanus limicola DSM 2279]
gi|373908691|gb|EHQ36795.1| SSU ribosomal protein S4E [Methanoplanus limicola DSM 2279]
Length = 242
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 115/231 (49%), Gaps = 6/231 (2%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ HLKRLN+P W + K F K + GPH S +P+ + LR+ + A +EV I
Sbjct: 1 MSNHLKRLNSPSGWRIPKKTNTFVKKTAPGPHNSH-AMPVAVWLRDHVGLANNVKEVKKI 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L R ++V+G TD G D++SIPK + +R+L + KG + + ++ AK +LC
Sbjct: 60 LTDRSLIVNGSPCTDSKMGIGVFDIISIPKIGKYYRILRNKKGDYVSVEITEDAAKSRLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN---KITDFIKFDVGNIV 181
K+ + G +N G + D++ L LE K+ D F VG++
Sbjct: 120 KISDKTIVKGGRIQLNLRYGANVIVDSQEYNPKDSVVLSLEPETRFKVIDHFPFAVGSVA 179
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFET-IHI-QDALGHEFATRLGNVFTIGK 230
M+ GG++ G+VG I GS I++ ++ G EF T VF +GK
Sbjct: 180 MIIGGKHSGKVGKISEICVVPGSIPNRIYLTEEKTGVEFDTIEDYVFIVGK 230
>gi|47079417|gb|AAT10160.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 232
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 9/226 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
H+KRL P+ W L + + KP+ G H C+PL ++LR+ L A RE +L
Sbjct: 3 SSHMKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRML 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
R VLVDG++ TD G MDV+++ + ++FR + D G+ R S+ D+ A KLC+
Sbjct: 63 ATRQVLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCR 120
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
V G I+ +DGR I D L + DT+ + L + + F G +T
Sbjct: 121 VMGKSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLT 180
Query: 185 GGRNRGRVGIIKNRE-KHKGSFETIHIQDALGHEFATRLGNVFTIG 229
GG + G + +R+ K + D F T VF IG
Sbjct: 181 GGSHIGITAKVVSRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221
>gi|119872074|ref|YP_930081.1| 30S ribosomal protein S4 [Pyrobaculum islandicum DSM 4184]
gi|189045359|sp|A1RS06.1|RS4E_PYRIL RecName: Full=30S ribosomal protein S4e
gi|119673482|gb|ABL87738.1| SSU ribosomal protein S4E [Pyrobaculum islandicum DSM 4184]
Length = 238
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
HL+R AP W + K+GG + + S GPH LPL +++R+ LKYA T RE I+
Sbjct: 3 HLRRTTAPYWWPIPRKIGGVWVVRSSPGPHSLAYSLPLAIIIRDVLKYAKTMREARYIIS 62
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+ +V +DG +R D +P G MDVV I T E +R++ D K + L + EEA KL +V
Sbjct: 63 RGYVKIDGVIRKDYKFPVGLMDVVEIVPTGEIYRVVPDEKKYYALIPISSEEATLKLLRV 122
Query: 127 RSVQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
+ G ++ +DGR + + IK DT+ DL+ I I F +G +V
Sbjct: 123 EGKTAVKGGKLQLHFHDGRNLIVSQDVGRHIKTFDTVLYDLQNKNIKMHIPFKLGAYAVV 182
Query: 184 TGGRNRGRVG 193
T G N G G
Sbjct: 183 TRGGNVGFSG 192
>gi|432091279|gb|ELK24482.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 203
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 60/77 (77%)
Query: 49 RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 108
RNRLKYA+T EV I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKG
Sbjct: 64 RNRLKYAVTGDEVKKICMQRFIKIDDKVRTDITYPAGFMDVISIDKTAENFRLIYDTKGH 123
Query: 109 FRLHSLRDEEAKFKLCK 125
F LH + EEAK+ LCK
Sbjct: 124 FALHCITPEEAKYNLCK 140
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Query: 203 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 262
GSF+ +H++DA G+ FA +L N+F KG+KPW+SLP GKGI L+I EE KR AA+ ++
Sbjct: 145 GSFDVVHVKDANGNSFAIQLSNIFV--KGNKPWISLPHGKGIHLTIAEERDKRLAAKQSS 202
>gi|379994273|gb|AFD22763.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 74
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 59/74 (79%)
Query: 64 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 123
I+ QR + VDGK RTD TYPAGFMDV+SI KTNENFRLLYDTK RF L + EEAKFKL
Sbjct: 1 IVKQRLLKVDGKARTDATYPAGFMDVISIEKTNENFRLLYDTKARFALKKITAEEAKFKL 60
Query: 124 CKVRSVQFGQKGIP 137
C+V+ + GQKGIP
Sbjct: 61 CRVKKLLVGQKGIP 74
>gi|145591931|ref|YP_001153933.1| 30S ribosomal protein S4 [Pyrobaculum arsenaticum DSM 13514]
gi|189045357|sp|A4WLL4.1|RS4E_PYRAR RecName: Full=30S ribosomal protein S4e
gi|145283699|gb|ABP51281.1| SSU ribosomal protein S4E [Pyrobaculum arsenaticum DSM 13514]
Length = 238
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
HL+R AP W + K GG + KPS GPH LPL +V+R+ L+YA T RE I+
Sbjct: 3 HLRRSLAPYWWPIPRKAGGVWVVKPSPGPHSFAYSLPLAIVIRDVLRYAKTLREARYIVS 62
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+ ++ VDG VR D +P G MDV+ I T E +R++ D + L + EA KL +V
Sbjct: 63 RGYIKVDGVVRKDYRFPVGLMDVIEIVPTGEVYRVVPDQDRYYNLLPIPSSEASLKLLRV 122
Query: 127 RSVQFGQKGIPYINTYDGRT-IRYPD--PLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
G ++ +DGR I PD IK DTI DLE I I +G + +V
Sbjct: 123 EGKTTVNGGRLQLHFHDGRNLITSPDMGAKIKTFDTILYDLENKTIKTHIPMKLGVVAVV 182
Query: 184 TGGRNRGRVG 193
T G N G G
Sbjct: 183 THGSNVGFSG 192
>gi|193083743|gb|ACF09430.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 231
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 7/228 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 65
+ H+KRL P+ W L + + KP+ G H C+PL L+LR+ L A T RE IL
Sbjct: 3 RSHIKRLVMPRSWALPRKATIWVQKPNPGGHSIENCMPLALILRDILGVAHTRREANRIL 62
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
R V+VDG++ TD G MDV+++ N+R + DT G+ R + +A K+C+
Sbjct: 63 HSRQVMVDGRIETDGGRGVGLMDVLTV--GGNNYRCVLDTNGKLRYRPIHARDADSKVCR 120
Query: 126 VRSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
V + ++ +DGR + D K+ DT+ + L E I+ F G V +T
Sbjct: 121 VMGKTTLRGSKSQLHLHDGRNLIMDDASAYKSGDTVVISLPEQDISAHHPFGDGATVYLT 180
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 232
GG + G + ++ + + S + +F T VF IG S
Sbjct: 181 GGSHIGEIVTVRGHDVKRSSKP----NEVQFDDFLTIADYVFVIGSES 224
>gi|161751098|ref|NP_376299.2| 30S ribosomal protein S4e [Sulfolobus tokodaii str. 7]
gi|54039526|sp|Q975J2.2|RS4E_SULTO RecName: Full=30S ribosomal protein S4e
gi|342306184|dbj|BAK54273.1| 30S ribosomal protein S4e [Sulfolobus tokodaii str. 7]
Length = 243
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 8/230 (3%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H+ R AP L K + + + GPHK E +PL L+L++ L A T RE ++++
Sbjct: 3 HITRFEAPWFLNLSKKEYKWTIRANPGPHKLSESIPLALLLKHYLNVAETTREAKRLVVE 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
++VDG+VR D +P G MDV+SIP ++ FR++ D + E+AK+K ++
Sbjct: 63 GKIMVDGRVRKDYKFPVGLMDVISIPSSDLYFRIVPDNIKYLMPVKISKEDAKYKFVRIV 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVM 182
+ + G +N DGR I P + + T+K+++ I + G +
Sbjct: 123 NKTTNKNGNIQLNLEDGRNILIPKEKVPEMNYPTLTTLKIEIPSQNIIKSYELSEGKYAI 182
Query: 183 VTGGRNRGRVGIIKNRE---KHKGSFETIHIQDALGHEFATRLGNVFTIG 229
+ GGRN G G+IK + K + + I+ G T L NV IG
Sbjct: 183 IIGGRNVGLHGVIKTIQYAKYKKRKYSIVTIEQKNGESVQTNLQNVMVIG 232
>gi|126460352|ref|YP_001056630.1| 30S ribosomal protein S4 [Pyrobaculum calidifontis JCM 11548]
gi|189045358|sp|A3MWZ7.1|RS4E_PYRCJ RecName: Full=30S ribosomal protein S4e
gi|126250073|gb|ABO09164.1| SSU ribosomal protein S4E [Pyrobaculum calidifontis JCM 11548]
Length = 237
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
HL++ AP W + K GG +A +PS+GPH LPL +V+R+ L+YA T RE I+
Sbjct: 3 HLRKSLAPYWWPIPRKAGGVWAVRPSTGPHSLEYSLPLAVVVRDVLRYAKTLREARYIIS 62
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+ ++ VDG VR D +P G MDVV I T E +R++ D + L + EA K +V
Sbjct: 63 RGYIKVDGVVRKDYKFPIGLMDVVEIVPTGEIYRVVPDEAKYYDLKPIPSSEAALKPLRV 122
Query: 127 RSVQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
G ++ +DGR + P + IK DT+ DLE I + +G + +V
Sbjct: 123 EGKTAVSGGRIQLHFHDGRNLILPPDVGRQIKTFDTVVYDLENKAIKTHLPLRLGQLAVV 182
Query: 184 TGGRNRGRVG 193
T G N G VG
Sbjct: 183 THGGNIGFVG 192
>gi|119621546|gb|EAX01141.1| hCG1643126, isoform CRA_b [Homo sapiens]
Length = 128
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 85/160 (53%), Gaps = 37/160 (23%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR-----FRLHSLRDEEAK 120
MQ+ + +D KV TD TY G +DV SI KT ENF L+ DT+ + ++L L A
Sbjct: 1 MQQFIKIDDKVLTDITYATGSLDV-SINKTRENFHLICDTRAQKKSLIWQLMMLAPSAAL 59
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
LIK ND ++ DLE KITDFI+F+ GN+
Sbjct: 60 -------------------------------ALIKVNDIVQTDLETGKITDFIRFNTGNL 88
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 220
MVTGG N GR+G I NREKH G F+ +H++DA + FAT
Sbjct: 89 CMVTGGANLGRIGAITNREKHPGFFDVVHVKDANSNSFAT 128
>gi|444706232|gb|ELW47581.1| EF-hand domain-containing family member A1 [Tupaia chinensis]
Length = 426
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 62/80 (77%)
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
++KLCKVR + G KGIP++ T+D RTI Y DPLIK NDTI++D+E K +DFIKFD G
Sbjct: 347 TQYKLCKVRKIFVGIKGIPHLVTHDARTISYLDPLIKVNDTIQIDMEIGKSSDFIKFDTG 406
Query: 179 NIVMVTGGRNRGRVGIIKNR 198
N+ MVTGG N GR+G+I NR
Sbjct: 407 NLCMVTGGANLGRIGVITNR 426
>gi|413917030|gb|AFW56962.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 142
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 54/60 (90%)
Query: 28 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 87
A KP GPHKSRECLPLIL++RN LKYAL YREVI+ILMQRHVLVDGKV TDKTYPAGFM
Sbjct: 56 ALKPYFGPHKSRECLPLILIIRNMLKYALAYREVISILMQRHVLVDGKVWTDKTYPAGFM 115
>gi|342906010|gb|AEL79288.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 73
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 59/73 (80%)
Query: 29 PKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMD 88
P PS+GPHK RECLPL++ LRNRLKYALT EV I+MQR + VDGKVRTD YPAGFMD
Sbjct: 1 PAPSTGPHKLRECLPLVIFLRNRLKYALTNVEVTKIVMQRLIKVDGKVRTDPNYPAGFMD 60
Query: 89 VVSIPKTNENFRL 101
V++I KT E FRL
Sbjct: 61 VITIEKTGEFFRL 73
>gi|171186001|ref|YP_001794920.1| 30S ribosomal protein S4e [Pyrobaculum neutrophilum V24Sta]
gi|226697784|sp|B1Y9S4.1|RS4E_THENV RecName: Full=30S ribosomal protein S4e
gi|170935213|gb|ACB40474.1| Ribosomal protein S4E, central domain protein [Pyrobaculum
neutrophilum V24Sta]
Length = 238
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
HL+R +P W + K GG +A +PS GPH +PL LV+R+ L+YA T RE I+
Sbjct: 3 HLRRTTSPYWWPIPRKAGGVWAVRPSPGPHSLAYSIPLALVIRDVLRYAKTLREARMIIS 62
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+ ++ VDG VR + +P G MDVV I T E +R++ D + + L + EEA KL +V
Sbjct: 63 RGYIKVDGVVRRNYKFPVGLMDVVEIVPTGEIYRVVPDERSYYALVPITSEEADLKLLRV 122
Query: 127 RSVQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
+ G ++ +DGR + P IK D++ DL+ + I +G +V
Sbjct: 123 EGKTAVKGGRLQVHFHDGRNLIMPAETARQIKTFDSVLYDLKARTVRSHIPMRLGVYAVV 182
Query: 184 TGGRNRG 190
T G N G
Sbjct: 183 THGGNVG 189
>gi|268325727|emb|CBH39315.1| 30S ribosomal protein S4e [uncultured archaeon]
Length = 235
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 4/226 (1%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H KR+ AP+ W + + ++ P GPH +PL+L++R+ LK A RE IL +
Sbjct: 3 HQKRIAAPRSWKIKRKVSYWSVDPVPGPHPKDRSMPLLLLVRDLLKLADNSREAKRILNE 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
+V+V+GKVR + +P G DV+S+PK ++ +L D KG+ L + +E A +KLC+V
Sbjct: 63 GNVVVNGKVRKEHKFPIGIFDVLSVPKLKAHYMVLLDKKGKLSLIEIDEEAAFWKLCRVD 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYP---DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
+ G +N +DGR I P + IK +D++ + + +N+I ++ GN +V
Sbjct: 123 GRTMIKAGKRQLNLHDGRNI-LPGERNEAIKTHDSLMISVPDNEILQHFAYEAGNKAVVI 181
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 230
GG++ G I+ K K S + F T VF +GK
Sbjct: 182 GGKHSAETGEIEEIRKTKSSDPNVVRIKQDERSFETIEDYVFVVGK 227
>gi|70606400|ref|YP_255270.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius DSM 639]
gi|449066612|ref|YP_007433694.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius N8]
gi|449068886|ref|YP_007435967.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius Ron12/I]
gi|3914911|sp|O05634.1|RS4E_SULAC RecName: Full=30S ribosomal protein S4e
gi|2052258|emb|CAA69089.1| ribosomal protein S4E [Sulfolobus acidocaldarius]
gi|68567048|gb|AAY79977.1| 30S ribosomal protein S4E [Sulfolobus acidocaldarius DSM 639]
gi|449035120|gb|AGE70546.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius N8]
gi|449037394|gb|AGE72819.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius Ron12/I]
Length = 244
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 114/234 (48%), Gaps = 14/234 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H+ R AP + K + + +GPHK +E +PL ++L+ LK T RE I+
Sbjct: 3 HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFD 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
VLVDGKVR D YP G MDVV IP + R++ D ++ E+AK+K ++
Sbjct: 63 GKVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIM 122
Query: 128 SVQFGQKGIPYINTYDGRTI--------RYPDPLIKANDTIKLDLEENKITDFIKFDVGN 179
+ + G+ +N DGR I +Y P + T+K++L E KIT G
Sbjct: 123 NKTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTL---TTLKIELPEQKITTAYTIKEGV 179
Query: 180 IVMVTGGRN---RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 230
M+ GGRN G++ I+ + + + + ++ G F T L NV IG+
Sbjct: 180 YAMIIGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLINVMAIGE 233
>gi|403214615|emb|CCK69116.1| hypothetical protein KNAG_0B06920 [Kazachstania naganishii CBS
8797]
Length = 74
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 59/70 (84%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPNHWLLDKLTGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHV 70
V AILM+RHV
Sbjct: 61 VKAILMERHV 70
>gi|374326782|ref|YP_005084982.1| 30S ribosomal protein S4e [Pyrobaculum sp. 1860]
gi|356642051|gb|AET32730.1| 30S ribosomal protein S4e [Pyrobaculum sp. 1860]
Length = 238
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
HL++ AP W + K GG +A +PS GPH LPL +V+R+ LKYA T RE I+
Sbjct: 3 HLRKSLAPYWWPIPRKAGGVWAIRPSPGPHSLAYSLPLAMVIRDVLKYAKTMREARYIIS 62
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+ +V VDG VR D +P G MDVV I T E +R++ D++ + L + EE+ KL +V
Sbjct: 63 RGYVKVDGVVRRDYKFPVGLMDVVEIVPTGEVYRVVPDSEKYYNLLPIPSEESSMKLLRV 122
Query: 127 RSVQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
+ G ++ +DGR + L IK D++ DL+ I I +G V+
Sbjct: 123 EGKTAVKGGKLQLHFHDGRNLITTPELGRQIKTFDSVLYDLQNKSIKMHIPLKLGVNVLA 182
Query: 184 TGGRNRGRVGII 195
G N G G++
Sbjct: 183 IHGSNVGFAGVL 194
>gi|413917031|gb|AFW56963.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 135
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 54/60 (90%)
Query: 28 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 87
A KP GPHKSRECLPLIL++RN LKYAL YREVI+ILMQRHVLVDGKV TDKTYPAGFM
Sbjct: 56 ALKPYFGPHKSRECLPLILIIRNMLKYALAYREVISILMQRHVLVDGKVWTDKTYPAGFM 115
>gi|374724277|gb|EHR76357.1| 30S ribosomal protein S4e [uncultured marine group II
euryarchaeote]
Length = 233
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 9/233 (3%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIA 63
G HLKRL P+ W L + + +P++G H C+P+ LV+R+ L +A + REV
Sbjct: 2 GSSNHLKRLAMPRSWPLPRKTTIWVTRPTAGAHSLELCMPINLVIRDVLGFARSTREVRH 61
Query: 64 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 123
IL ++DG+V + G MDV+S+ + ++R + D GR R + +EA +K+
Sbjct: 62 ILHNGLAMIDGRVCKETRRGVGLMDVLSL--GDNHYRCVLDHNGRLRYRPISADEAGWKV 119
Query: 124 CKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVM 182
C++ + G +N +DGR I D ++KL L +I + IKF G
Sbjct: 120 CRIEGKSTIKGGKTQLNLHDGRNIIVDDAAEYSTGSSLKLALPSQEIIEHIKFAEGVRCY 179
Query: 183 VTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKP 234
+ GG + G + + E + S + +D F T NVF +G + P
Sbjct: 180 LIGGAHVGGFANMTSFEVKRSSMANEVQFED-----FGTVATNVFAVGSATLP 227
>gi|414875901|tpg|DAA53032.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 215
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/55 (89%), Positives = 51/55 (92%)
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 175
FKLCKVRSVQFGQKGIPY+NTYDGRTI YPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 139 FKLCKVRSVQFGQKGIPYLNTYDGRTIHYPDPLIKANDTIKIDLETNKIMDFIKL 193
>gi|413936658|gb|AFW71209.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 150
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 120 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 175
+FKLCKVR VQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 73 QFKLCKVRFVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKL 128
>gi|126178526|ref|YP_001046491.1| 30S ribosomal protein S4 [Methanoculleus marisnigri JR1]
gi|125861320|gb|ABN56509.1| SSU ribosomal protein S4E [Methanoculleus marisnigri JR1]
Length = 242
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 114/235 (48%), Gaps = 9/235 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ K+LKRL AP W + K F K + GPH + LP+ + LR + A EV I
Sbjct: 1 MSKYLKRLVAPGSWHIPKKVQKFVMKTAPGPHNA-GALPVGVWLREHIGLAQNASEVKKI 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L QR VLV+G+ D G D+VSIPK +++R+ D KG + E AK +LC
Sbjct: 60 LHQRDVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN-----KITDFIKFDVGN 179
K+R+ + G +N G + D KA D++ + L + +I D + GN
Sbjct: 120 KIRNKTTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGN 178
Query: 180 IVMVTGGRNRGRVGIIKNREKHKGSF--ETIHIQDALGHEFATRLGNVFTIGKGS 232
+ M+ GG++ G+VG I + S I D+ G F T VF +G+ +
Sbjct: 179 VAMIVGGKHSGKVGRIVEIIRTASSVPNHVILTDDSAGERFETIEEYVFMVGRSA 233
>gi|413932716|gb|AFW67267.1| putative threonine aldolase family protein [Zea mays]
Length = 467
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 52/57 (91%)
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 175
+FKLCKVRSV FGQKGIPY+NTYDGRT+RYPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 389 CEFKLCKVRSVLFGQKGIPYLNTYDGRTMRYPDPLIKANDTIKIDLETNKIMDFIKL 445
>gi|390363321|ref|XP_788494.2| PREDICTED: 40S ribosomal protein S4-like [Strongylocentrotus
purpuratus]
Length = 79
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 61/76 (80%)
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
M+TGGRN GRVG I +REKH GSFE +HI+DA H +ATRLGNVF IGK +K +VSLPKG
Sbjct: 1 MITGGRNLGRVGTITHREKHPGSFEIVHIKDASDHTYATRLGNVFVIGKANKAYVSLPKG 60
Query: 242 KGIKLSIIEEARKRQA 257
KGI+L+I EE KR A
Sbjct: 61 KGIRLTIAEEREKRIA 76
>gi|161899455|ref|XP_001712961.1| ribosomal protein S4 [Bigelowiella natans]
gi|2500490|sp|Q40941.1|RS4_BIGNA RecName: Full=40S ribosomal protein S4
gi|1401207|gb|AAD05368.1| small subunit ribosomal protein 4 [Bigelowiella natans]
gi|75756456|gb|ABA27349.1| ribosomal protein S4 [Bigelowiella natans]
Length = 242
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 117/238 (49%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYRE 60
MA+G+KKH KR+++ K G F K SSGPH + + L+ +++ A +E
Sbjct: 1 MAKGIKKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQE 60
Query: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
++ + V+GK +P MD +S P N+++R+L G+ ++ + E
Sbjct: 61 AQKVVKTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKD 120
Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
K+CKV + I T D R ++ IK D++ + ++I +KF+VG++
Sbjct: 121 LKICKVIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSL 180
Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
++T G++ G + +IK K K + IH++ G + + ++ IG+ +SL
Sbjct: 181 CLITRGKHLGTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>gi|413941845|gb|AFW74494.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 173
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 54/62 (87%)
Query: 136 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 195
IPY+NTYDGRTIR PD LIKANDT K+DLE NKI DF KFDVGN+VMV GGRN GRVG+I
Sbjct: 112 IPYLNTYDGRTIRNPDQLIKANDTTKIDLETNKIMDFFKFDVGNVVMVIGGRNIGRVGVI 171
Query: 196 KN 197
KN
Sbjct: 172 KN 173
>gi|154150087|ref|YP_001403705.1| 30S ribosomal protein S4 [Methanoregula boonei 6A8]
gi|153998639|gb|ABS55062.1| Ribosomal protein S4E, central [Methanoregula boonei 6A8]
Length = 241
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 117/231 (50%), Gaps = 7/231 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ HLKRLNAP W + K F K + GPH + +P+ + LR++ A T +EV I
Sbjct: 1 MSDHLKRLNAPDSWHITKKTTKFVAKTAPGPHNA-NAMPVAVWLRDQQGLARTMKEVKQI 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q+ V+++G+ D G DV+++P+ + FR+L D KGR + + E A+ +LC
Sbjct: 60 LKQKDVVINGRPVRDPKMGIGIFDVIALPRIGKYFRVLRDLKGRHKTVEIDAEAAQKRLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN---KITDFIKFDVGNIV 181
K+ + G +N G I D K+ND++ + L+ KI + F GN+
Sbjct: 120 KIENKTIVPGGKVQLNLRYGANI-IADNTYKSNDSVVISLKPEDRFKILEHYPFVAGNMA 178
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHE-FATRLGNVFTIGK 230
+ GGR+ G+V I K GS + ++D E F T ++ IGK
Sbjct: 179 TIIGGRHSGKVARIIEIIKTPGSVPNKVILEDEKTKERFDTITPYIYMIGK 229
>gi|268323249|emb|CBH36837.1| 30S ribosomal protein S4e [uncultured archaeon]
Length = 235
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H KR+ AP+ W + + ++ P GPH +PL+L++R+ LK A RE IL +
Sbjct: 3 HQKRIAAPRSWKIKRKVSYWSVDPVPGPHPKDRSMPLLLLVRDLLKLADNSREAKRILNE 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
+V+V+GKVR + +P G DV+S+PK ++ +L D KG+ L + +E A KLC+V
Sbjct: 63 GNVVVNGKVRKEHKFPIGIFDVLSVPKLKAHYMVLLDKKGKLSLIEIDEEVASRKLCRVD 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYPD--PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 185
++G +N +DGR I + IK +D++ + + +N+I ++ GN +V G
Sbjct: 123 GRTMIKEGKRQLNLHDGRNILPGERSEEIKTHDSLMISVPDNEILQHFAYEAGNKAVVIG 182
Query: 186 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 230
G++ G I+ K + S + F T VF +GK
Sbjct: 183 GKHSAETGEIEEIRKTESSDPNVVRIKQDERSFETIEDYVFVVGK 227
>gi|413943661|gb|AFW76310.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 182
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 56/66 (84%), Gaps = 2/66 (3%)
Query: 110 RLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKI 169
++HS +E FKLCKVRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLE NKI
Sbjct: 97 QVHSFSLQE--FKLCKVRSVQFGQKGIPYLNTYDDRTICYPDPLIKANDTIKIDLETNKI 154
Query: 170 TDFIKF 175
DFIK
Sbjct: 155 MDFIKL 160
>gi|413943660|gb|AFW76309.1| putative ribosomal protein S4 (RPS4A) family protein, partial [Zea
mays]
Length = 414
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 56/66 (84%), Gaps = 2/66 (3%)
Query: 110 RLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKI 169
++HS +E FKLCKVRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLE NKI
Sbjct: 97 QVHSFSLQE--FKLCKVRSVQFGQKGIPYLNTYDDRTICYPDPLIKANDTIKIDLETNKI 154
Query: 170 TDFIKF 175
DFIK
Sbjct: 155 MDFIKL 160
>gi|414877859|tpg|DAA54990.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 491
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 51/59 (86%)
Query: 117 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 175
E FKLCKVRSV FGQKGIPY+NTYDG T+RYPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 411 ETNMFKLCKVRSVLFGQKGIPYLNTYDGCTMRYPDPLIKANDTIKIDLETNKIMDFIKL 469
>gi|414877860|tpg|DAA54991.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 476
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 51/59 (86%)
Query: 117 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 175
E FKLCKVRSV FGQKGIPY+NTYDG T+RYPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 396 ETNMFKLCKVRSVLFGQKGIPYLNTYDGCTMRYPDPLIKANDTIKIDLETNKIMDFIKL 454
>gi|77024951|gb|ABA61378.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 232
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 7/228 (3%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H+KRL P+ W L + + +P H C+ + +VLR+ + A + RE L
Sbjct: 5 HMKRLAMPRSWPLTRKTDIWISRPRPSGHPLERCMAMGVVLRDVIGVAKSMREAKRALAT 64
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
R + VDG+V TD G MDV+S+ ++++R + D G+ R S+ +EA KLC++
Sbjct: 65 RKIRVDGRVTTDIRRGVGVMDVLSVG--DDHYRCVLDKNGKLRYASISAKEAGHKLCRID 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGG 186
+ G+ +N +DGR I D DT+ LD+E KI KF+ G + GG
Sbjct: 123 GKTTIKGGVTQLNLHDGRNILVDDANKYNTMDTLVLDVESQKIEGHHKFEAGANCYLIGG 182
Query: 187 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 234
+ G + + S + + L +F T + +VF IG + P
Sbjct: 183 SHTGGTAAMNEYLVKRSSKD----NEVLFEDFGTIVDHVFVIGDANLP 226
>gi|294496005|ref|YP_003542498.1| 30S ribosomal protein S4E [Methanohalophilus mahii DSM 5219]
gi|292667004|gb|ADE36853.1| SSU ribosomal protein S4E [Methanohalophilus mahii DSM 5219]
Length = 236
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KR++ PK W + K + GPH + +PL +VLR+ L E +
Sbjct: 1 MGKHQKRISVPKSWQISKKSRKWITSTRPGPHSKEQSVPLAVVLRDMLGIVDNRAEAKRV 60
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + VLVDG VR D P G MD+++IP N ++R+L D GR L + E K KLC
Sbjct: 61 LSEGKVLVDGVVRKDVRLPVGIMDIITIPSDNTSYRVLLDRMGRLSLQKIGGIEEK-KLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
++ + G +N DG + + K D+I + + +I I++ GN+ ++
Sbjct: 120 RIDGKTCIKGGKLQLNLDDGSNVLGSNDY-KRKDSIVISIPGKEILKHIEYKEGNLALIV 178
Query: 185 GGRNRGRVGII 195
GG + G VG I
Sbjct: 179 GGSHTGEVGKI 189
>gi|255098783|gb|ACU00732.1| 40S ribosomal protein S4 [Nosema bombycis]
gi|326559168|gb|ADZ95623.1| 40S ribosomal protein S4 [Nosema bombycis]
Length = 172
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 1/153 (0%)
Query: 101 LLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTI 160
+LY +F +H + EA FKL KV S + + +PYI T DG RY DP I+ NDT+
Sbjct: 1 MLYSVDKKFHIHKIDKAEASFKLAKVISKKTMYEDVPYIFTNDGSCFRYCDPKIEVNDTV 60
Query: 161 KLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 220
K+DL K+ DFI F+ +V V G + GRV +IK+ ++ S I ++D F
Sbjct: 61 KIDLASRKVVDFIPFETDKVVYVIKGEDMGRVCVIKHIKEVDYSDSIITVEDFAKKVFTI 120
Query: 221 RLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEEA 252
N+ IG +SLP +GIKL+ +EE+
Sbjct: 121 PSKNLIVIGNSEDNLLISLPAQRGIKLNELEES 153
>gi|388516491|gb|AFK46307.1| unknown [Lotus japonicus]
Length = 98
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 131 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 190
G K +PYI T+D RTIRYPDP IKANDTI+LD+ KI + IKFD GNIVM+TGG N G
Sbjct: 1 MGPKKVPYIITHDARTIRYPDPHIKANDTIQLDIATGKIQEHIKFDTGNIVMITGGHNLG 60
Query: 191 RVGIIKNREKHKGSF 205
RVG+I++RE+H G
Sbjct: 61 RVGVIQSRERHPGHL 75
>gi|158563815|gb|ABW74359.1| ribosomal protein S4, partial [Modiolus modiolus]
Length = 73
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%)
Query: 127 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGG 186
R V KG+PY+ T+DGRTIRYPDPL+K NDT+ +D+E KI DFIKFD GN+ M+TGG
Sbjct: 1 RKVGVALKGVPYVTTHDGRTIRYPDPLVKVNDTVMVDIETGKIKDFIKFDSGNLCMITGG 60
Query: 187 RNRGRVGIIKNRE 199
N GRVG++++RE
Sbjct: 61 HNLGRVGVVQHRE 73
>gi|448730389|ref|ZP_21712697.1| 30S ribosomal protein S4e [Halococcus saccharolyticus DSM 5350]
gi|445793557|gb|EMA44129.1| 30S ribosomal protein S4e [Halococcus saccharolyticus DSM 5350]
Length = 265
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 3/201 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ P W +++ F K +GPH +PL++VLR+ L Y + +E
Sbjct: 1 MSKHQKRLSVPNSWPVERKTEKFTVKAGAGPH-GESGVPLLVVLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q VLV+G D+ P G D++ + NE++R+ D GR L ++ ++A KL
Sbjct: 60 LNQGSVLVNGDALDDEERPIGMFDILEFDERNEHYRVFPDEGGRLALTTIDADDADSKLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKA-NDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ Q G + +DGRT+ D A +D+I +D E+++I ++ G +V
Sbjct: 120 KIEGKQQVSGGATQLALHDGRTLEVDDASEYAGSDSIVVD-EDDEILAHFSYEEGALVTA 178
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
GR+ G VG I + + GS
Sbjct: 179 VEGRHAGEVGEIDDIQVTPGS 199
>gi|51011518|gb|AAT92168.1| ribosomal protein S4 [Ixodes pacificus]
Length = 81
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 63/79 (79%)
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 241
MVTGG N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK +KP++SLP+G
Sbjct: 1 MVTGGHNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRG 60
Query: 242 KGIKLSIIEEARKRQAAQA 260
KGIKLS+ EE +R A++
Sbjct: 61 KGIKLSVAEERDRRLQAKS 79
>gi|448386101|ref|ZP_21564309.1| 30S ribosomal protein S4e [Haloterrigena thermotolerans DSM 11522]
gi|445655999|gb|ELZ08841.1| 30S ribosomal protein S4e [Haloterrigena thermotolerans DSM 11522]
Length = 232
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTETFTVKADAGPH-GEDGVPLVVLLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +L++G D+ P G D+V+ P E +R+ D GR L + +E A+ +L
Sbjct: 60 LSEDAILINGDAINDEQRPIGMFDIVAFPGRGEYYRVFPDEGGRLALTEIDEESAQSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ Q G + +DG + D +AND+I +D ++ I ++ G +V
Sbjct: 120 KIEGKQQVPGGDTQLTLHDGTNVLVDDDEYQANDSIVIDNDDKSIVAHFPYEEGALVTAV 179
Query: 185 GGRNRGRVGIIKNREKHKGS 204
G + G++G + + GS
Sbjct: 180 RGNHGGKIGEVDAIDVTPGS 199
>gi|88603487|ref|YP_503665.1| 30S ribosomal protein S4 [Methanospirillum hungatei JF-1]
gi|121731773|sp|Q2FT37.1|RS4E_METHJ RecName: Full=30S ribosomal protein S4e
gi|88188949|gb|ABD41946.1| SSU ribosomal protein S4E [Methanospirillum hungatei JF-1]
Length = 241
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 7/230 (3%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
HLKR+ +PK W + + F K S GPH ++ LP+++ R+++ +E +L +
Sbjct: 4 HLKRVVSPKSWGIPRKTDKFVTKTSPGPH-NKNALPIVVWARDQMGIVRNMKEAKHVLRE 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
R ++V+G+ G D+VSIPK+ +++R+L D KGR + ++ A +L K+
Sbjct: 63 REIIVNGRPVRHPDMGIGIFDIVSIPKSGKHYRILRDKKGRHVTIPIDEDAASSRLVKIT 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEE---NKITDFIKFDVGNIVMVT 184
+ + G +N DG + D K+ D+I L L+E N+I D F GN+ M+
Sbjct: 123 NKTIVKGGRIQLNLRDGSNV-LTDKQYKSGDSIVLSLKEGQKNEIIDHFPFQPGNMAMII 181
Query: 185 GGRNRGRVGIIKNREKHKGSF--ETIHIQDALGHEFATRLGNVFTIGKGS 232
GG++ G VG I GS I ++ G F T V +G+ S
Sbjct: 182 GGKHSGVVGRIIEHIPVPGSLPNRVILKDESSGESFETIDEYVVMVGRES 231
>gi|414588670|tpg|DAA39241.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 472
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 51/59 (86%)
Query: 117 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 175
E FKL KVRSV FGQKGIPY+NTYDGRT+RYPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 392 ETNMFKLYKVRSVLFGQKGIPYLNTYDGRTMRYPDPLIKANDTIKIDLETNKIMDFIKL 450
>gi|429190332|ref|YP_007176010.1| ribosomal protein S4E [Natronobacterium gregoryi SP2]
gi|448326244|ref|ZP_21515611.1| 30S ribosomal protein S4e [Natronobacterium gregoryi SP2]
gi|429134550|gb|AFZ71561.1| ribosomal protein S4E [Natronobacterium gregoryi SP2]
gi|445612901|gb|ELY66618.1| 30S ribosomal protein S4e [Natronobacterium gregoryi SP2]
Length = 243
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTEVFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G+ D+ P G D+V+ P E +R+ D GR L + + A+ +L
Sbjct: 60 LSEDAILVNGEPINDEQRPIGIFDIVAFPGREEYYRVFPDEGGRLSLTGIDADSAESRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ S Q G + +DG + D D+I +D ++ I ++ G +V
Sbjct: 120 KIESKQQVSGGDTQLTLHDGTNVIADDDGYSTTDSIVVDNDDKSIVAHFPYEEGALVTAV 179
Query: 185 GGRNRGRVGIIKNREKHKGS 204
G + G++G I++ E GS
Sbjct: 180 RGNHGGKIGEIESIEVTPGS 199
>gi|414869820|tpg|DAA48377.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 207
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 80/162 (49%), Gaps = 65/162 (40%)
Query: 66 MQRHVLVDGKVRTDKTYPAGFMDV-VSIPKTNENFR--LLYD------------------ 104
+QRHVLVDGKVRTDKTYPAGFM + +S+ + + L+ D
Sbjct: 70 LQRHVLVDGKVRTDKTYPAGFMGMPISLLMHKDTYTPILVADLWCHFFGRCHFHSLRQTR 129
Query: 105 TKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 164
T FRLH +RDE+AKFKLC RS+Q
Sbjct: 130 TTCCFRLHPIRDEDAKFKLCNGRSIQ---------------------------------- 155
Query: 165 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 206
FDVGN+VMVTGGRN GRVG+IKN EKHKG FE
Sbjct: 156 ----------FDVGNVVMVTGGRNTGRVGVIKNWEKHKGIFE 187
>gi|290558898|gb|EFD92288.1| RNA-binding S4 domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 220
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 109/198 (55%), Gaps = 6/198 (3%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MAR G KH KR ++ + + KP G H S++ + ++ LR+ LK A R
Sbjct: 1 MARHGESKHFKRSVVTASLVIPRKKYKYYTKPLPGKHSSKDGVSILGFLRDVLKIAANAR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLR-DEE 118
E ++ +V VDGK ++ Y GF D+VS+ +N+ L++ G+ +L S++ DE+
Sbjct: 61 EARYLIKNGYVFVDGKKVIEEKYVVGFSDIVSVK---DNYFLVW-LSGKGKLISVKKDEK 116
Query: 119 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
KL KV S G+KG+ + T D R I YP ++ ND++ LDL+ IT I F+ G
Sbjct: 117 IDSKLIKVMSKHKGKKGMNILFTNDSRNIVYPKDDVQINDSVSLDLKSYSITGKIPFESG 176
Query: 179 NIVMVTGGRNRGRVGIIK 196
++V G+N G+ G+IK
Sbjct: 177 KNIIVFSGKNAGKKGVIK 194
>gi|41615262|ref|NP_963760.1| 30S ribosomal protein S4e [Nanoarchaeum equitans Kin4-M]
gi|54039525|sp|P62429.1|RS4E_NANEQ RecName: Full=30S ribosomal protein S4e
gi|40068986|gb|AAR39321.1| NEQ478 [Nanoarchaeum equitans Kin4-M]
Length = 234
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 111/230 (48%), Gaps = 4/230 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
M +K+HL+ L P+ W + K G + KPS GPH +P+ + LR+ L A R
Sbjct: 1 MPTYIKRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMR 60
Query: 60 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 119
EV +L VLVDG+ D +P G DV++IP+ NE +R+L D +G+ L + EEA
Sbjct: 61 EVRYLLNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEA 120
Query: 120 KFKLCK-VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 178
K K +R V I Y T DGRT D K + + ++ KI + I +
Sbjct: 121 NIKYGKIIRKVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKD 178
Query: 179 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 228
+ G++ GR+G+IK K + I + G T L N+ +
Sbjct: 179 RKAYIIRGKHTGRIGVIKEVIKTDMPWPNIVRLEVAGEVGETWLDNIIPV 228
>gi|18313980|ref|NP_560647.1| 30S ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
gi|23822150|sp|Q8ZTD3.1|RS4E_PYRAE RecName: Full=30S ribosomal protein S4e
gi|18161555|gb|AAL64829.1| ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
Length = 238
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 95/192 (49%), Gaps = 4/192 (2%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
HL+R AP W + K GG + +PS GPH LPL L++R+ LKYA T E I+
Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIIS 62
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+ +V VDG VR D +P G MDV+ I T E +R++ D + L + EEA KL +V
Sbjct: 63 RGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRV 122
Query: 127 RSVQFGQKGIPYINTYDGR---TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
+ G ++ +DGR T IK D++ DL I I +G +V
Sbjct: 123 EGKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVV 182
Query: 184 TGGRNRGRVGII 195
G N G G +
Sbjct: 183 IHGSNVGFSGTL 194
>gi|374633056|ref|ZP_09705423.1| ribosomal protein S4E [Metallosphaera yellowstonensis MK1]
gi|373524540|gb|EHP69417.1| ribosomal protein S4E [Metallosphaera yellowstonensis MK1]
Length = 242
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 13/234 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H+ RLNAP L K + KP GPH +PL ++LR+ L A RE I+
Sbjct: 3 HITRLNAPWFLRLSKKEYKWTVKPIPGPHPLSRSIPLGILLRDYLGIASNLRESKKIISD 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
V+VDG+VR D YP G MDV++IP + +R++ D ++ + EEA +KL ++
Sbjct: 63 GLVMVDGRVRRDYKYPVGLMDVITIPSASLYYRVVPDRVRLLKVVKISSEEAGYKLVRLT 122
Query: 128 SVQFGQKGIPYINTYDGRTIRYPDPLIKAN------DTIKLDLEENKITDFIKFDVGNIV 181
+ +N DGR I D + T K+ + +I + G V
Sbjct: 123 GKTVVKGSALQLNFEDGRNILLKDKQEASQFNMPTLTTFKIAIPSQQILGTYQLKEGVYV 182
Query: 182 MVTGGRNRGRVGIIK-----NREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 230
M GG+N G +G +K N +K + + I +D G E+ T L N +G+
Sbjct: 183 MAIGGKNAGVIGTLKRIQWANYKKKRHTIVVIRGED--GTEYETNLENSMVVGE 234
>gi|397780856|ref|YP_006545329.1| 30S ribosomal protein S4e [Methanoculleus bourgensis MS2]
gi|396939358|emb|CCJ36613.1| 30S ribosomal protein S4e [Methanoculleus bourgensis MS2]
Length = 244
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ HLKRL AP+ W + K F K + GPH + LP+ + LR + A EV I
Sbjct: 1 MSNHLKRLVAPESWRIPKKVQKFVMKTAPGPHNA-GGLPVGVWLREHIGIAQNASEVRKI 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L QR VLV+G+ + G D+VSIPK +++R+ D G + +E AK +LC
Sbjct: 60 LHQRDVLVNGRPCRNPQIGLGVFDIVSIPKLGKHYRIQLDKLGNLISVEIPEESAKTRLC 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENK-------ITDFIKFDV 177
K+R+ + G +N G I D KA D++ + L + K I D F
Sbjct: 120 KIRNKTVIKGGRVQLNLAFGANI-LADNTYKAKDSVVVTLGDPKSGEDRFRIIDHFPFAE 178
Query: 178 GNIVMVTGGRNRGRVGIIKNREKHKGSF--ETIHIQDALGHEFATRLGNVFTIGK 230
GN+ M+ GG++ G+VG I + S + + D+ F T +F +G+
Sbjct: 179 GNVAMIVGGKHSGKVGRIVEITRTASSVPNRVVLVDDSADERFETIEEYIFMVGR 233
>gi|448503700|ref|ZP_21613329.1| 30S ribosomal protein S4e [Halorubrum coriense DSM 10284]
gi|445691901|gb|ELZ44084.1| 30S ribosomal protein S4e [Halorubrum coriense DSM 10284]
Length = 237
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 104/201 (51%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL+ P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPNSWPVERKTNTFTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L +LV+G +D+ P G D+++ P+ E FR+ D GR L + ++ A +L
Sbjct: 60 LNNDSILVNGDAVSDEQRPIGMFDILAFPERGEYFRVFPDEGGRLALTPVDEDAAGSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ + G+ + +DG +R D + ND+I +D E +I +++ G +V
Sbjct: 120 KITNKTVVPGGVVQLTLHDGTNVRVDDDADYETNDSIVVDNETKEIVAHFEYEEGELVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G++ G++G I++ + GS
Sbjct: 180 VAGQHAGQIGEIEDIDVTLGS 200
>gi|414884682|tpg|DAA60696.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 169
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 56/73 (76%), Gaps = 3/73 (4%)
Query: 103 YDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKL 162
YD K + L +E FKLCKV S QFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+
Sbjct: 78 YDHKPESQRAPLLEE---FKLCKVSSAQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKI 134
Query: 163 DLEENKITDFIKF 175
DLE +KI DFIK
Sbjct: 135 DLETSKIMDFIKL 147
>gi|433590206|ref|YP_007279702.1| ribosomal protein S4E [Natrinema pellirubrum DSM 15624]
gi|448332388|ref|ZP_21521632.1| 30S ribosomal protein S4e [Natrinema pellirubrum DSM 15624]
gi|433304986|gb|AGB30798.1| ribosomal protein S4E [Natrinema pellirubrum DSM 15624]
gi|445627492|gb|ELY80816.1| 30S ribosomal protein S4e [Natrinema pellirubrum DSM 15624]
Length = 232
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTETFTVKADAGPH-GEDGVPLVVLLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +L++G D+ P G D+V+ P E +R+ D GR L + +E A+ +L
Sbjct: 60 LSEDAILINGDAINDEQRPIGMFDIVAFPGRGEYYRVFPDEGGRLALTEIDEESAQSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ Q G + +DG + D +A D+I +D ++ I ++ G +V
Sbjct: 120 KIEGKQQVPGGDTQLTLHDGTNVLVDDDEYQAKDSIVIDNDDKSIVAHFPYEEGALVTAV 179
Query: 185 GGRNRGRVGIIKNREKHKGS 204
G + G++G + + GS
Sbjct: 180 RGNHGGKIGEVDAIDVTPGS 199
>gi|448489452|ref|ZP_21607675.1| 30S ribosomal protein S4e, partial [Halorubrum californiensis DSM
19288]
gi|445694824|gb|ELZ46942.1| 30S ribosomal protein S4e, partial [Halorubrum californiensis DSM
19288]
Length = 214
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL+ P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPNSWPVERKTDTFTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L +LV+G +D+ P G D+++ P+ E FR+ D GR L + ++ A +L
Sbjct: 60 LNNDSILVNGDAISDEQRPIGMFDILAFPERGEYFRVFPDEGGRLALTPVDEDAAGSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ + G+ + +DG +R D + ND+I +D E +I +++ G +V
Sbjct: 120 KITNKTVVPGGVVQLTLHDGTNVRVDDDADYETNDSIVVDNETKEIVAHFEYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G++ G++G I + + GS
Sbjct: 180 VAGQHAGQIGEIDDIDVTLGS 200
>gi|193084304|gb|ACF09963.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 221
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 7/219 (3%)
Query: 15 PKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDG 74
P+ W L + + KP+ G H C+PL L+LR+ L A T RE IL R V+VDG
Sbjct: 2 PRSWALPRKTTIWVQKPNPGGHSIENCMPLALILRDILGVAHTRREANRILHSRQVMVDG 61
Query: 75 KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQK 134
++ TD G MDV+++ N+R + DT G+ R + +A K+C+V +
Sbjct: 62 RIETDGGRGVGLMDVLTV--GGNNYRCVLDTNGKLRYRPIHARDADSKVCRVMGKTTLRG 119
Query: 135 GIPYINTYDGRTIRYPD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 193
++ +DGR + D K+ DT+ + L E I+ F G V +TGG + G +
Sbjct: 120 SKSQLHFHDGRNLIMDDTSAYKSGDTVVISLPEQDISAHHPFGDGATVYLTGGSHIGEIV 179
Query: 194 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 232
++ + + S + +F T VF IG S
Sbjct: 180 TVRGHDVKRSSKP----NEVQFDDFHTIADYVFVIGSES 214
>gi|414884540|tpg|DAA60554.1| TPA: hypothetical protein ZEAMMB73_865049 [Zea mays]
Length = 401
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 50/54 (92%)
Query: 157 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
N TIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 340 NGTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 393
>gi|448369927|ref|ZP_21556380.1| 30S ribosomal protein S4e [Natrialba aegyptia DSM 13077]
gi|445650367|gb|ELZ03291.1| 30S ribosomal protein S4e [Natrialba aegyptia DSM 13077]
Length = 248
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 2/200 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTEVFTVKADAGPH-GEEGVPLVVLLRDVLGYVDSAKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + ++V+G+ D+ P G D+++ P E +R+ D GR L + +E A +L
Sbjct: 60 LSEDSIIVNGEPINDEQRPIGIFDILAFPGRGEFYRVFPDEGGRLALTEIDEESADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ Q G + +DG T+ D A D++ +D E+ I ++ G +V
Sbjct: 120 KIDGKQQVPGGDTQLTLHDGTTVLVDDEF-SAKDSVVVDNEDKSIVAHFPYEEGALVTAI 178
Query: 185 GGRNRGRVGIIKNREKHKGS 204
G + G++G +++ + GS
Sbjct: 179 RGNHGGKIGEVESIDVTPGS 198
>gi|452206436|ref|YP_007486558.1| 30S ribosomal protein S4e [Natronomonas moolapensis 8.8.11]
gi|452082536|emb|CCQ35794.1| 30S ribosomal protein S4e [Natronomonas moolapensis 8.8.11]
Length = 269
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 2/214 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL PK W +++ + K ++GPH +PL++VLR+ L YA + +E
Sbjct: 1 MTKHQKRLAVPKSWPVERKEETYTTKAAAGPH-GEAGVPLLIVLRDVLGYADSKKETRYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q VLV+GK +D+ P G D+++ + E +R+ D GR L + E A KL
Sbjct: 60 LEQDSVLVNGKAVSDERQPIGMFDILAFREREEYYRVFPDEGGRLSLTPIDAESAGSKLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLI-KANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ G + +DG+T+ D ND+I + + +I ++ G +V
Sbjct: 120 KIVGKAQVPGGDTQLTLHDGQTLLVEDATTYDGNDSIVVSNDAEEIVAHFTYEKGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHE 217
G + GR+G I + GS + +A G E
Sbjct: 180 VSGAHAGRIGTIDEIQVTPGSSPNNVLIEAAGGE 213
>gi|354610525|ref|ZP_09028481.1| 30S ribosomal protein S4e [Halobacterium sp. DL1]
gi|353195345|gb|EHB60847.1| 30S ribosomal protein S4e [Halobacterium sp. DL1]
Length = 233
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KRL+ PK W +++ F K +GPH +PL++VLR+ L Y E
Sbjct: 1 MTNHQKRLSVPKSWPVERKTETFTAKAGAGPH-GESGVPLVVVLRDVLGYVDDTSEAQYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
+ VLV+G D P G D+++ P +E +R+ D GR L + + A KL
Sbjct: 60 INTDGVLVNGASVGDVKRPIGMFDILAFPARDEYYRVFPDEGGRLGLTPIEADAADSKLN 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
KV G +N +DG + D +D++ ++ E N+I +++ G +V
Sbjct: 120 KVEDKTTVSGGQTQLNFHDGTNLLVEDDSYSGSDSVVVENETNEIVAHFEYEEGALVTAV 179
Query: 185 GGRNRGRVGIIKNREKHKGSFE-TIHIQ 211
G++ G +G +++ GS E T+ ++
Sbjct: 180 AGQHAGEIGTVEDITVQPGSAENTVRVE 207
>gi|257053371|ref|YP_003131204.1| 30S ribosomal protein S4e [Halorhabdus utahensis DSM 12940]
gi|256692134|gb|ACV12471.1| Ribosomal protein S4E, central domain protein [Halorhabdus
utahensis DSM 12940]
Length = 286
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 103/203 (50%), Gaps = 2/203 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KRL+ P W +++ F K +GPH +PL++VLR+ L Y + +E
Sbjct: 1 MSNHQKRLSVPNSWPIERKTETFTVKADAGPH-GEAGVPLLIVLRDVLGYVDSRKEARFA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q VL++G +D+T P G D+++ + E +R+ GR L + ++ A+ KL
Sbjct: 60 LDQDQVLINGDPESDETRPVGMFDILAFTEREEFYRVFPGEGGRLALTPIDEDSAQSKLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYP-DPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ QF G + +DG T+ D + ND++ ++ + +I +++ G +V
Sbjct: 120 KIVGKQFVPGGDLQLTLHDGETLLVSEDAPYEGNDSVVVENDSEEIVAHFEYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGSFE 206
G++ G +G I+ + GS E
Sbjct: 180 VDGQHAGEIGTIEEIQVTPGSAE 202
>gi|335437500|ref|ZP_08560276.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|335438897|ref|ZP_08561628.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|334890168|gb|EGM28442.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|334895848|gb|EGM34011.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
Length = 277
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 103/203 (50%), Gaps = 2/203 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KRL+ P W +++ F K +GPH +PL++VLR+ L Y + +E
Sbjct: 1 MSNHQKRLSVPNSWPIERKTETFTVKADAGPH-GEAGVPLLIVLRDVLGYVDSRKEARFA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q VL++G +D+T P G D+++ + E +R+ GR L + ++ A+ KL
Sbjct: 60 LDQDQVLINGDPESDETRPVGMFDILAFTEREEFYRVFPGEGGRLALTPIDEDSAQSKLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYP-DPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ QF G + +DG T+ D + ND+I ++ + ++ +++ G +V
Sbjct: 120 KIVQKQFVPGGDLQLTLHDGETLLVSEDAPYEGNDSIVVENDSEEVIAHFEYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGSFE 206
G++ G +G I+ + GS E
Sbjct: 180 VDGQHAGEIGTIEEIQVTPGSAE 202
>gi|448323151|ref|ZP_21512615.1| 30S ribosomal protein S4e [Natronococcus amylolyticus DSM 10524]
gi|445600337|gb|ELY54350.1| 30S ribosomal protein S4e [Natronococcus amylolyticus DSM 10524]
Length = 236
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K SGPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTNVFTVKADSGPH-GEDGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q +L++G+ D+ P G D+V+ P E +R+ D GR L + + A +L
Sbjct: 60 LSQDSILINGEPINDEQRPIGMFDIVAFPGREEYYRVFPDEGGRLALTEIDADAADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ + G + +DG I + ND++ +D ++ + ++ G +V
Sbjct: 120 KIEGKRQVPGGDTQLTLHDGTNILAEESEYSTNDSVVVDNDDKSVVAHFPYEEGALVTAI 179
Query: 185 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 220
G + G++G + + GS I DA F T
Sbjct: 180 SGNHGGKIGEVTEIDVTPGSGSNIVTVDADDGLFET 215
>gi|409731012|ref|ZP_11272562.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
gi|448724770|ref|ZP_21707275.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
gi|445784979|gb|EMA35775.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
Length = 253
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 10/204 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ P W +++ F K ++GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MSKHQKRLSVPNSWPVERKTATFTVKATAGPH-GEDGVPLLILLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q VLV+ + +D+ P G D+V + +E++R+ D GR L + +A KL
Sbjct: 60 LNQGSVLVNNETLSDEQRPIGMFDIVEFAERDEHYRVFPDEGGRLALTPIDAADADSKLG 119
Query: 125 KVRSVQFGQKGIPYINT----YDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
K+ G++ +P NT +DGRT+ + ND+I +D +N+I ++ G +
Sbjct: 120 KIE----GKRQVPGGNTQLSLHDGRTLEIDEGDYAGNDSIVVDT-DNEILAHFPYEEGAL 174
Query: 181 VMVTGGRNRGRVGIIKNREKHKGS 204
V G++ G +G I + GS
Sbjct: 175 VTAVRGQHAGEIGEIDEIQVTPGS 198
>gi|448350193|ref|ZP_21539012.1| 30S ribosomal protein S4e [Natrialba taiwanensis DSM 12281]
gi|445637700|gb|ELY90848.1| 30S ribosomal protein S4e [Natrialba taiwanensis DSM 12281]
Length = 248
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 2/200 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTEVFTVKADAGPH-GEEGVPLVVLLRDVLGYVDSAKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + ++V+G+ D+ P G D+++ P E +R+ D GR L + +E A +L
Sbjct: 60 LSEDSIIVNGEPINDEQRPIGIFDILAFPGRGEFYRVFPDEGGRLALTEIDEESADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ Q G + +DG T+ D A D++ +D E+ I ++ G +V
Sbjct: 120 KIDGKQQVPGGDTQLTLHDGTTVLVDDEF-SAKDSVIVDNEDKSIVAHFPYEEGALVTAI 178
Query: 185 GGRNRGRVGIIKNREKHKGS 204
G + G++G +++ + GS
Sbjct: 179 RGNHGGKIGEVESIDVTPGS 198
>gi|146302888|ref|YP_001190204.1| 30S ribosomal protein S4e [Metallosphaera sedula DSM 5348]
gi|189045355|sp|A4YCX8.1|RS4E_METS5 RecName: Full=30S ribosomal protein S4e
gi|145701138|gb|ABP94280.1| SSU ribosomal protein S4E [Metallosphaera sedula DSM 5348]
Length = 241
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 9/239 (3%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQ 67
H+ RL AP K + + S GPH + +PL L+LR+ L + + +E I+
Sbjct: 3 HITRLEAPWFLRASKKEYKWTVRASPGPHPLGKSIPLGLLLRDYLAFTSSLKESKKIISD 62
Query: 68 RHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVR 127
VLVDG+VR D YP G MDV++IP + R++ D + + +EE+KFKL ++
Sbjct: 63 GKVLVDGRVRRDYKYPVGLMDVIAIPHADLYLRIVPDRARLLKPVKISEEESKFKLVRLL 122
Query: 128 SVQFGQKGIPYINTYDGRTI---RYPDPLIK--ANDTIKLDLEENKITDFIKFDVGNIVM 182
+ + G+ N DGR + + + K T+K+ + +I F VM
Sbjct: 123 NKTLVKGGLLQFNLEDGRNLLISKESTEMFKLPTLTTLKISIPNQEILGVYGFKENVYVM 182
Query: 183 VTGGRNRGRVGIIKNREKHKGS---FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 238
GG+N G +G +K + + + I+ G E+ T L N IG+ KP V +
Sbjct: 183 AVGGKNAGIIGQLKRIQTSPYKTRRYSIVVIRSPDGSEYETNLENAMVIGE-EKPEVKV 240
>gi|1272662|emb|CAA94808.1| ribosomal protein S4 [Homo sapiens]
Length = 59
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 51/59 (86%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYR 59
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYAL R
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALDRR 59
>gi|379994415|gb|AFD22834.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 124
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 54/65 (83%)
Query: 138 YINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 197
++ T+DGRTIRYPDPLI+AND++K+DL KIT+F+KF+ GN M+TGG N GRVG++ N
Sbjct: 1 FVVTHDGRTIRYPDPLIRANDSVKVDLASGKITEFVKFETGNTCMITGGHNMGRVGVVTN 60
Query: 198 REKHK 202
EKH+
Sbjct: 61 VEKHE 65
>gi|17380573|sp|Q56230.2|RS4E_THEAC RecName: Full=30S ribosomal protein S4e
Length = 235
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 7/232 (3%)
Query: 10 KRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRH 69
KRL + + + + P P+ G H + + L+ ++R+ LK + RE IL
Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGL 65
Query: 70 VLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSV 129
V VDGK +K + GFMDV+ I E++R++Y+ +G L E A KL KVRS
Sbjct: 66 VKVDGKTVREKKFAVGFMDVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSK 123
Query: 130 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNR 189
+ T+DGRT D K D + + + KI++ IK GN +T G +
Sbjct: 124 VIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHV 183
Query: 190 GRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+ G I E +GS +H Q+ F+T +VF IG +V P+
Sbjct: 184 NQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSPE 231
>gi|16082261|ref|NP_394715.1| 30S ribosomal protein S4e [Thermoplasma acidophilum DSM 1728]
gi|1373335|gb|AAB02244.1| ribosomal protein s4e [Thermoplasma acidophilum]
gi|10640605|emb|CAC12383.1| 30S RIBOSOMAL PROTEIN S4E [Thermoplasma acidophilum]
Length = 237
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 7/232 (3%)
Query: 10 KRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRH 69
KRL + + + + P P+ G H + + L+ ++R+ LK + RE IL
Sbjct: 8 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGL 67
Query: 70 VLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSV 129
V VDGK +K + GFMDV+ I E++R++Y+ +G L E A KL KVRS
Sbjct: 68 VKVDGKTVREKKFAVGFMDVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSK 125
Query: 130 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNR 189
+ T+DGRT D K D + + + KI++ IK GN +T G +
Sbjct: 126 VIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHV 185
Query: 190 GRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 240
+ G I E +GS +H Q+ F+T +VF IG +V P+
Sbjct: 186 NQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSPE 233
>gi|448415407|ref|ZP_21578207.1| 30S ribosomal protein S4e [Halosarcina pallida JCM 14848]
gi|445681065|gb|ELZ33506.1| 30S ribosomal protein S4e [Halosarcina pallida JCM 14848]
Length = 252
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+AP W +++ F K +GPH + +PL+++LR+ L YA + +E
Sbjct: 1 MTKHQKRLSAPNSWPIERKEETFTVKAGAGPH-GQAGVPLLILLRDVLGYADSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q VLV+G +D++ P G D+++ + E FR+ D GR L + E A +L
Sbjct: 60 LNQDTVLVNGDAVSDESRPIGMFDILAFTEREEYFRVFPDEGGRLALTPIDAESADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDP----LIKANDTIKLDLEENKITDFIKFDVGNI 180
KV Q + G + +DG +R D + D++ +D E +I ++ G +
Sbjct: 120 KVAGKQSVKGGATQLTLHDGSNVRVEDEDDPDQYHSKDSLVVDNETKEIVAHFPYEEGAL 179
Query: 181 VMVTGGRNRGRVGII 195
V G + G +G +
Sbjct: 180 VTAVDGTHAGEIGEV 194
>gi|448399322|ref|ZP_21570624.1| 30S ribosomal protein S4e [Haloterrigena limicola JCM 13563]
gi|445669229|gb|ELZ21842.1| 30S ribosomal protein S4e [Haloterrigena limicola JCM 13563]
Length = 232
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH ++ +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDTFTVKAGAGPH-GQDGVPLVVLLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G D+ P G D+++ P E +R+ D GR L ++ ++ A+ +L
Sbjct: 60 LSEDAILVNGDAINDEQRPIGMFDIIAFPGREEYYRVFPDEGGRLALTAIDEDAAQSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ Q G + +DG + D D+I +D ++ I ++ G +V
Sbjct: 120 KIEGKQQIPGGDTQLTLHDGTNVLVEDDEYDTRDSIVIDNDDKSIVAHFPYEEGALVTAV 179
Query: 185 GGRNRGRVGIIKNREKHKGS 204
G + G++G I + GS
Sbjct: 180 RGNHGGKIGEIDAIDITPGS 199
>gi|110668729|ref|YP_658540.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
gi|109626476|emb|CAJ52937.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
Length = 265
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 4/205 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL+AP W +++ F K +GPH +PL+++LR+ L YA + +E
Sbjct: 1 MTQHQKRLSAPNSWPIERKTETFTVKAGAGPH-GESGVPLVILLRDVLGYADSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L QR VLV+G V +D+ P G D+++ + E +R+ + GR L + +A +L
Sbjct: 60 LNQRSVLVNGDVVSDEQRPVGLFDILAFTEREEYYRVFPEAGGRLALTPIDISDANSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRY-PDPLIKAN--DTIKLDLEENKITDFIKFDVGNIV 181
K+ + Q G + +DG IR D + N D++ +D E +I ++ G +V
Sbjct: 120 KIINKQQVSGGAIQLTLHDGANIRVNADEIDTYNPRDSLVIDNETKEIVAHFPYEEGALV 179
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFE 206
G++ G +G I+ GS E
Sbjct: 180 TAVSGKHSGEIGEIETITVTAGSSE 204
>gi|435848736|ref|YP_007310986.1| ribosomal protein S4E [Natronococcus occultus SP4]
gi|433675004|gb|AGB39196.1| ribosomal protein S4E [Natronococcus occultus SP4]
Length = 245
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDVFTVKADAGPH-GEDGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q +LV+G+ D+ P G D+V+ P E +R+ D GR L ++ + A +L
Sbjct: 60 LSQDSILVNGEPINDEQRPIGMFDIVAFPGREEYYRVFPDEGGRLALTAIDADAADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ + G + +DG I D ND+I +D ++ + ++ G +V
Sbjct: 120 KIEGKRQVPGGDTQLTLHDGTNILAEDDEYDTNDSIVVDNDDKSVVAHFPYEEGALVTAV 179
Query: 185 GGRNRGRVGIIKNREKHKGSFETI 208
G + G++G + + GS I
Sbjct: 180 RGNHGGKIGEVTEIDVTPGSGSNI 203
>gi|448377818|ref|ZP_21560514.1| 30S ribosomal protein S4e [Halovivax asiaticus JCM 14624]
gi|445655762|gb|ELZ08607.1| 30S ribosomal protein S4e [Halovivax asiaticus JCM 14624]
Length = 244
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 2/205 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KRL+ PK W +++ F K +GPH + +PL+++LR+ L+Y +E
Sbjct: 1 MSNHQKRLSVPKSWPVERKTDTFTVKAGAGPH-GEDGVPLLILLRDVLEYVDNRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L VLV+G +D+ P G D+++ P E +R+ D GR L + E A+ +L
Sbjct: 60 LANDAVLVNGDEISDEERPIGMFDILAFPDREEAYRVFPDEGGRLSLTPIDAESAESRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLI-KANDTIKLDLEENKITDFIKFDVGNIVMV 183
KV + G+ ++ +DG + D ND++ +D E +I ++ G +V
Sbjct: 120 KVEGKRQVTGGVTQLSLHDGTNVTVDDEATYGVNDSVVVDNESKEIVAHFPYEDGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGSFETI 208
G + G++G I + GS I
Sbjct: 180 VRGNHAGKIGQIAEIDVTPGSGSNI 204
>gi|385804229|ref|YP_005840629.1| 30S ribosomal protein S4 [Haloquadratum walsbyi C23]
gi|339729721|emb|CCC40999.1| 30S ribosomal protein S4e [Haloquadratum walsbyi C23]
Length = 265
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 4/205 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL+AP W +++ F K +GPH +PL+++LR+ L YA + +E
Sbjct: 1 MTQHQKRLSAPDSWPIERKTETFTVKAGAGPH-GESGVPLVILLRDVLGYADSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L QR VLV+G V +D+ P G D+++ + E +R+ + GR L + +A +L
Sbjct: 60 LNQRSVLVNGDVVSDEQRPVGLFDILAFTEREEYYRVFPEAGGRLALTPIDISDANSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRY-PDPLIKAN--DTIKLDLEENKITDFIKFDVGNIV 181
K+ + Q G + +DG IR D + N D++ +D E +I ++ G +V
Sbjct: 120 KIINKQQVSGGAIQLTLHDGANIRVNADEIDTYNPRDSLVIDNETKEIVAHFPYEEGALV 179
Query: 182 MVTGGRNRGRVGIIKNREKHKGSFE 206
G++ G +G I+ GS E
Sbjct: 180 TAVSGKHSGEIGEIETITVTAGSSE 204
>gi|414868178|tpg|DAA46735.1| TPA: hypothetical protein ZEAMMB73_851694 [Zea mays]
Length = 411
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 160 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
+K+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 353 VKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 403
>gi|448358816|ref|ZP_21547490.1| 30S ribosomal protein S4e [Natrialba chahannaoensis JCM 10990]
gi|445644496|gb|ELY97509.1| 30S ribosomal protein S4e [Natrialba chahannaoensis JCM 10990]
Length = 232
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDVFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G+ D+ P G D+++ P E +R+ D GR L + E A +L
Sbjct: 60 LSEDSILVNGEPINDEQRPIGIFDIIAFPGREEFYRVFPDEGGRLALTEIDAESADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ Q G + +DG + + A D+I +D ++ I ++ G +V
Sbjct: 120 KIAGKQQIPGGDTQLTLHDGTNVLIDEDDYSAKDSIVVDNDDKSIAAHFPYEEGALVTAV 179
Query: 185 GGRNRGRVGIIK-------------NREKHKGSFETIH 209
G + G++G I E G+FET+
Sbjct: 180 RGNHGGKIGEIAEIEVTQSSGSNIVTVETDDGAFETVE 217
>gi|352683264|ref|YP_004893788.1| 30S ribosomal protein S4e [Thermoproteus tenax Kra 1]
gi|350276063|emb|CCC82710.1| 30S ribosomal protein S4e [Thermoproteus tenax Kra 1]
Length = 235
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 8 HLKRLNAPKHW-MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILM 66
HL+R +P W + K GG + +P +GPHK +PL + +R+ L+YA T RE I+
Sbjct: 3 HLRRAASPAWWPIARKEGGVWTVRPVTGPHKLHRSMPLAIFVRDLLRYAKTLREARYIIS 62
Query: 67 QRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKV 126
+ ++ VDG+VR + +P G MD+V I T E +R++ D R ++ EA KL +V
Sbjct: 63 RGYIKVDGRVRREYKFPVGVMDIVEIVPTGEVYRIVPDPVKYIRPVAISSGEADLKLLRV 122
Query: 127 RSVQFGQKGIPYINTYDGRT-IRYPDPLI--KANDTIKLDLEENKITDFIKFDVGNIVMV 183
+ ++ +DGR I PD + K D++ L E +I + F +G ++
Sbjct: 123 EGKNYVSGNRIQLHFHDGRNLILSPDEGLRYKTFDSVVYSLSERRIKQHVPFKLGVNALI 182
Query: 184 TGGRNRGRVG 193
G N G G
Sbjct: 183 FDGGNTGFFG 192
>gi|15790644|ref|NP_280468.1| 30S ribosomal protein S4 [Halobacterium sp. NRC-1]
gi|169236383|ref|YP_001689583.1| 30S ribosomal protein S4e [Halobacterium salinarum R1]
gi|17368985|sp|Q9HPC2.1|RS4E_HALSA RecName: Full=30S ribosomal protein S4e
gi|226697782|sp|B0R668.1|RS4E_HALS3 RecName: Full=30S ribosomal protein S4e
gi|10581171|gb|AAG19948.1| 30S ribosomal protein S4E [Halobacterium sp. NRC-1]
gi|167727449|emb|CAP14237.1| 30S ribosomal protein S4e [Halobacterium salinarum R1]
Length = 233
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KRL+ PK W +++ F K +GPH +PL++VLR+ L+Y E
Sbjct: 1 MTNHQKRLSVPKSWPVERKTETFTAKAGAGPH-GESGVPLVVVLRDVLEYVDDTSEAQYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
+ VLV+G D P G D+++ P +E +R+ D GR L + + A KL
Sbjct: 60 INTDGVLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLN 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
KV G +N +DG + + D++ +D + N+I +++ G +V
Sbjct: 120 KVTDKTTVSGGRTQLNFHDGSNLALDEDAYAGGDSVVVDTDTNEIVAHFQYEEGALVTAV 179
Query: 185 GGRNRGRVGIIKNREKHKGSFE-TIHIQDALG 215
G++ G +G I GS T+ + D G
Sbjct: 180 AGQHAGDIGEIAEINVQPGSASNTVRVDDENG 211
>gi|329317629|gb|AEB90949.1| putative ribosomal protein S4 [Mesopolobus amaenus]
Length = 113
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYP 60
Query: 84 AGFM 87
AGFM
Sbjct: 61 AGFM 64
>gi|329317633|gb|AEB90951.1| putative ribosomal protein S4 [Mesopolobus amaenus]
Length = 113
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYP 60
Query: 84 AGFM 87
AGFM
Sbjct: 61 AGFM 64
>gi|448311968|ref|ZP_21501721.1| 30S ribosomal protein S4e [Natronolimnobius innermongolicus JCM
12255]
gi|445603589|gb|ELY57551.1| 30S ribosomal protein S4e [Natronolimnobius innermongolicus JCM
12255]
Length = 237
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDTFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G+ D+ P G D+++ P E +R+ D GR L + + A +L
Sbjct: 60 LSEDAILVNGEPINDEKRPIGIFDILAFPGREEYYRVFPDEGGRLALTEIDADAADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ Q G + +DG + D +AND+I +D E+ I ++ G +V
Sbjct: 120 KIEGKQQVPGGQTQLTLHDGTNVVVDDEAEYEANDSIVVDNEDKSIVAHFPYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G + G++G I + GS
Sbjct: 180 IRGNHGGKIGEIDAIDVTPGS 200
>gi|329317631|gb|AEB90950.1| putative ribosomal protein S4 [Mesopolobus amaenus]
Length = 113
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYP 60
Query: 84 AGFM 87
AGFM
Sbjct: 61 AGFM 64
>gi|413918321|gb|AFW58253.1| hypothetical protein ZEAMMB73_482713 [Zea mays]
Length = 249
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 157 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
N TIK+DLE NKI DFIKFDVGN+VM+TGGRN G VG+IKNREKHKGSFETIH+
Sbjct: 188 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGRNTGHVGVIKNREKHKGSFETIHV 241
>gi|448298477|ref|ZP_21488506.1| 30S ribosomal protein S4e [Natronorubrum tibetense GA33]
gi|445591673|gb|ELY45874.1| 30S ribosomal protein S4e [Natronorubrum tibetense GA33]
Length = 234
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH ++ +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTETFTVKAGAGPH-GKDGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+GK D+ P G D+V+ P E +R+ D GR L + E A +L
Sbjct: 60 LSEDAILVNGKPINDEQRPIGMFDIVAFPGREEYYRVFPDEGGRLALTEIDAEAAGSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K++ Q G + +DG + D ++D+I +D E+ I F+ G +V
Sbjct: 120 KIKGKQQVPGGKTQLTLHDGTNVIVDDENEYNSDDSIVVDNEDKSIVAHFPFEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G + G++G I + GS
Sbjct: 180 VRGNHGGKIGEIDAIDITPGS 200
>gi|448315124|ref|ZP_21504777.1| 30S ribosomal protein S4e [Natronococcus jeotgali DSM 18795]
gi|445612383|gb|ELY66109.1| 30S ribosomal protein S4e [Natronococcus jeotgali DSM 18795]
Length = 236
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 2/204 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDVFTVKADAGPH-GEDGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G+ D+ P G D+V+ P E +R+ D GR L + E A +L
Sbjct: 60 LSEDSILVNGEPINDEQRPIGMFDIVAFPGREEYYRVFPDEGGRLALTEIDAEAADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ + Q G + +DG + D ND+I +D ++ I ++ G +V
Sbjct: 120 KIENKQQVSGGDTQLTLHDGTNVVV-DEEYSTNDSIVVDNDDKSIVAHFPYEEGALVTAV 178
Query: 185 GGRNRGRVGIIKNREKHKGSFETI 208
G + G++G + + GS I
Sbjct: 179 RGNHGGKIGEVSEIDVTPGSGSNI 202
>gi|336252428|ref|YP_004595535.1| 30S ribosomal protein S4e [Halopiger xanaduensis SH-6]
gi|335336417|gb|AEH35656.1| 30S ribosomal protein S4e [Halopiger xanaduensis SH-6]
Length = 233
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKTWPVERKTDTFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G+ D+ P G D+++ P E +R+ D GR L + E A+ +L
Sbjct: 60 LSEDAILVNGQPINDEQRPIGIFDIIAFPGREEYYRVFPDEGGRLALTEIDAEAAESRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ + Q G + +DG + D +ND+I +D ++ + ++ G +V
Sbjct: 120 KIDNKQQVPGGDTQLTLHDGTNVLVEDGAEYSSNDSIVIDNDDKSVVAHFPYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G + G++G ++ + GS
Sbjct: 180 IRGNHGGKIGEVETIDVTPGS 200
>gi|448545974|ref|ZP_21626301.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-646]
gi|448548048|ref|ZP_21627392.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-645]
gi|448557071|ref|ZP_21632506.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-644]
gi|445703320|gb|ELZ55251.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-646]
gi|445714750|gb|ELZ66508.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-645]
gi|445714940|gb|ELZ66697.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-644]
Length = 247
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 15/219 (6%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL+ PK W +++ G F K +GPH E +PL++VLR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPKSWPVERKTGTFTVKAGAGPH-GEEGVPLLIVLRDVLGYVDSKKEAQYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G V +D P G D+++ + E +R+ D GR L + + A +L
Sbjct: 60 LNHQSILVNGNVASDVRRPIGMFDILAFVQREEYYRVFPDEGGRLALTPIDADSASSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ S G + +DG T+ D D+I +D E + ++ G +V
Sbjct: 120 KIVSKTQVTGGDFQLTLHDGATLVVEDASEYSGKDSIVVDNETKDVVAHFPYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKN-------------REKHKGSFETIH 209
GR+ G +G I E G FET+
Sbjct: 180 VNGRHSGEIGEITEIIVTPGSGNNSVVVETEDGEFETVE 218
>gi|448569082|ref|ZP_21638494.1| 30S ribosomal protein S4e [Haloferax lucentense DSM 14919]
gi|448600499|ref|ZP_21655995.1| 30S ribosomal protein S4e [Haloferax alexandrinus JCM 10717]
gi|445725232|gb|ELZ76857.1| 30S ribosomal protein S4e [Haloferax lucentense DSM 14919]
gi|445735216|gb|ELZ86768.1| 30S ribosomal protein S4e [Haloferax alexandrinus JCM 10717]
Length = 247
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 15/219 (6%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL+ PK W +++ G F K +GPH E +PL++VLR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPKSWPVERKTGTFTVKAGAGPH-GEEGVPLLIVLRDVLGYVDSKKEAQYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G V +D P G D+++ + E +R+ D GR L + + A +L
Sbjct: 60 LNHQSILVNGNVASDVRRPIGMFDILAFVQREEYYRVFPDEGGRLALTPIDADSASSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ S G + +DG T+ D D+I +D E + ++ G +V
Sbjct: 120 KIVSKTQVTGGDFQLTLHDGATLVVEDASEYSGKDSIVVDNETKDVVAHFPYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKN-------------REKHKGSFETIH 209
GR+ G +G I E G FET+
Sbjct: 180 VNGRHSGEIGEITEIIVTPGSGNNSVVVETEDGEFETVE 218
>gi|414584705|tpg|DAA35276.1| TPA: hypothetical protein ZEAMMB73_072205 [Zea mays]
Length = 364
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 157 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
N TIK+DLE NKI DFIKFDVGN+VM+TGG N GRVG+IKNREKHKGSFETIH+
Sbjct: 303 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGTNTGRVGVIKNREKHKGSFETIHV 356
>gi|289579910|ref|YP_003478376.1| 30S ribosomal protein S4 [Natrialba magadii ATCC 43099]
gi|289529463|gb|ADD03814.1| Ribosomal protein S4E, central domain protein [Natrialba magadii
ATCC 43099]
Length = 235
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDVFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q +LV+G+ D+ P G D+++ P E +R+ D GR L + A +L
Sbjct: 60 LSQDSILVNGEPINDEQRPIGIFDIIAFPGREEYYRVFPDEGGRLALTEIDAGSADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ Q G + +DG + + A D+I +D ++ I ++ G +V
Sbjct: 120 KIDGKQQISGGDTQLTLHDGTNVLIDEDDYNAKDSIVVDNDDKSIVAHFPYEEGALVTAI 179
Query: 185 GGRNRGRVGIIKN-------------REKHKGSFETIH 209
G + G++G I + E G+FET+
Sbjct: 180 RGNHGGKIGEIVDIEVTQSSGSNIVTVETDDGAFETVE 217
>gi|322372156|ref|ZP_08046697.1| 30S ribosomal protein S4e [Haladaptatus paucihalophilus DX253]
gi|320548165|gb|EFW89838.1| 30S ribosomal protein S4e [Haladaptatus paucihalophilus DX253]
Length = 233
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KRL+ PK W +++ F K +GPH R+ +PL++++R+ L YA + +E
Sbjct: 1 MSNHQKRLSVPKSWPVERKTATFTVKAGAGPH-GRDGVPLLIIMRDVLGYAASKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q VLV+G+ +D+ P G D+++ + E +R+ D GR L + ++ A +L
Sbjct: 60 LNQDAVLVNGQSVSDEQRPIGMFDILAFTEREEYYRVFPDEGGRLALTPIDEDAADGRLA 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ G +N +DG +R D D+I L E+ I ++ G +V
Sbjct: 120 KIEDKTNVPGGETQLNLHDGSNLRVESDSDYNTKDSIVLGNEDKDILAHFPYEEGCLVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G++ G +G + + GS
Sbjct: 180 VRGQHAGEIGEVTDITVTPGS 200
>gi|76803069|ref|YP_331164.1| 30S ribosomal protein S4e [Natronomonas pharaonis DSM 2160]
gi|121731890|sp|Q3IMX6.1|RS4E_NATPD RecName: Full=30S ribosomal protein S4e
gi|76558934|emb|CAI50530.1| 30S ribosomal protein S4e [Natronomonas pharaonis DSM 2160]
Length = 237
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KRL PK W +++ A+ K ++GPH E +PL++VLR+ L Y + +E
Sbjct: 1 MTNHQKRLAVPKSWPVERKEEAYTTKAAAGPH-GEEGVPLLIVLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q +L++G +D+ P G D+++ + E +R+ D GR L + ++ A KL
Sbjct: 60 LEQDSILINGTAVSDERRPVGMFDILAFDEREEYYRIFPDEGGRLSLTPIDEDAAGSKLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLI-KANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ G ++ +DG T+ D ND+I + + +I ++ G +V
Sbjct: 120 KIVGKTQVAGGDTQLSLHDGETLLVEDATAYDTNDSIVVSNDGEEIVAHFTYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G + GR+G I + GS
Sbjct: 180 VSGAHAGRIGTIDEIQVTPGS 200
>gi|345005643|ref|YP_004808496.1| 30S ribosomal protein S4e [halophilic archaeon DL31]
gi|344321269|gb|AEN06123.1| 30S ribosomal protein S4e [halophilic archaeon DL31]
Length = 234
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KRL+ P W +++ F K +GPH +PL++VLR+ L Y + +E
Sbjct: 1 MSNHQKRLSVPNSWPVERKENTFTVKADAGPH-GESGVPLLIVLRDVLDYVDSRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q VLV+G D+ P G D+++ P E FR+ GR L + +E +L
Sbjct: 60 LNQDAVLVNGDAIADEARPIGMFDILAFPSREEFFRVFPGEGGRLALTPIDEESGSSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ Q G + +DG T + D AND++ +D E I ++ G +V
Sbjct: 120 KITGKQQVSGGDFQLTLHDGTTTQVEDASDYSANDSLVVDNETKDIVAHFTYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKN 197
G++ G +G I +
Sbjct: 180 VNGQHAGEIGEIDD 193
>gi|448392349|ref|ZP_21567123.1| 30S ribosomal protein S4e [Haloterrigena salina JCM 13891]
gi|445664439|gb|ELZ17148.1| 30S ribosomal protein S4e [Haloterrigena salina JCM 13891]
Length = 233
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTETFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G+ D+ P G D+V+ P E FR+ D GR L + ++ A +L
Sbjct: 60 LSEDAILVNGEPINDEKRPIGIFDIVAFPGREEYFRVFPDEGGRLALTEIDEDAAGSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ Q G + +DG + D + D+I +D ++ I F+ G +V
Sbjct: 120 KIEGKQQVPGGDTQLTLHDGTNVLVEDGSEYETTDSIVVDNDDKSIVAHFPFEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G + G++G I + GS
Sbjct: 180 VRGNHGGKIGEIDAIDITPGS 200
>gi|448362292|ref|ZP_21550903.1| 30S ribosomal protein S4e [Natrialba asiatica DSM 12278]
gi|445648813|gb|ELZ01761.1| 30S ribosomal protein S4e [Natrialba asiatica DSM 12278]
Length = 231
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 2/200 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTEVFTVKADAGPH-GEEGVPLVVLLRDVLGYVDSAKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + ++V+G+ D+ P G D+++ P E +R+ D GR L + +E A +L
Sbjct: 60 LSEDSIIVNGEPINDEQRPIGIFDILAFPGRGEFYRVFPDEGGRLALTEIDEESADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ + G + +DG + D A D++ +D E+ I ++ G +V
Sbjct: 120 KIDGKRQVPGGDTQLTLHDGTNVLVDDEF-SAKDSVVVDNEDKSIVAHFPYEEGALVTAI 178
Query: 185 GGRNRGRVGIIKNREKHKGS 204
G + G++G I++ + GS
Sbjct: 179 RGNHGGKIGEIESIDVTPGS 198
>gi|448475298|ref|ZP_21603016.1| 30S ribosomal protein S4e [Halorubrum aidingense JCM 13560]
gi|445816769|gb|EMA66656.1| 30S ribosomal protein S4e [Halorubrum aidingense JCM 13560]
Length = 241
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLAVPNSWPVERKTNTFTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L VLV+G +D+ P G D+V+ P+ E FR+ D GR L + ++ A +L
Sbjct: 60 LNNDSVLVNGDAISDEQRPIGMFDIVAFPERGEFFRVFPDEGGRLALTPVDEDAAGSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ + G + +DG +R D D+I +D E ++ +++ G +V
Sbjct: 120 KITNKAVVPGGDVQLTLHDGTNVRVDADTPYDTKDSIIIDNESKEVVAHFEYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G++ GR+G + + + GS
Sbjct: 180 VAGQHAGRIGEVDDIDVTLGS 200
>gi|313125802|ref|YP_004036072.1| 30S ribosomal protein S4e [Halogeometricum borinquense DSM 11551]
gi|448285641|ref|ZP_21476882.1| 30S ribosomal protein S4e [Halogeometricum borinquense DSM 11551]
gi|312292167|gb|ADQ66627.1| SSU ribosomal protein S4E [Halogeometricum borinquense DSM 11551]
gi|445576277|gb|ELY30734.1| 30S ribosomal protein S4e [Halogeometricum borinquense DSM 11551]
Length = 236
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL+AP W +++ G F K S+GPH +PL+++LR+ L Y +E
Sbjct: 1 MTRHQKRLSAPNSWPIERKEGTFTVKASAGPH-GEAGVPLLILLRDVLGYVDNKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q VLV+G +D+ P G D+++ + E FR+ D GR L + A +L
Sbjct: 60 LNQDGVLVNGDAISDEQRPIGMFDILAFTEREEYFRVFPDEGGRLTLTPIDASAADSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDP----LIKANDTIKLDLEENKITDFIKFDVGNI 180
KV Q + G + +DG +R + + D++ +D E +I ++ G +
Sbjct: 120 KVVGKQSVKGGATQLTLHDGSNVRVEEDEEPNQYSSKDSLVIDNETKEIVAHFPYEEGAL 179
Query: 181 VMVTGGRNRGRVGIIK-------------NREKHKGSFETIH 209
V G + G +G + E G FET+
Sbjct: 180 VTAVDGSHAGEIGTVTEITVTPGSGNNSVTVETEDGEFETVE 221
>gi|413948894|gb|AFW81543.1| hypothetical protein ZEAMMB73_624427 [Zea mays]
Length = 76
Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 160 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
+K+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 18 VKIDLETNKIMDFIKFDVGNMVMVTGGRNTGRVGVIKNREKHKGSFETIHV 68
>gi|433638921|ref|YP_007284681.1| ribosomal protein S4E [Halovivax ruber XH-70]
gi|433290725|gb|AGB16548.1| ribosomal protein S4E [Halovivax ruber XH-70]
Length = 254
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 2/205 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KRL+ PK W +++ F K +GPH + +PL+++LR+ L+Y +E
Sbjct: 1 MSNHQKRLSVPKSWPVERKTDTFTVKAGAGPH-GEDGVPLLILLRDVLEYVDNRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L VLV+G +D+ P G D+++ P E +R+ D GR L + E A+ +L
Sbjct: 60 LANDAVLVNGDEISDEERPIGMFDILAFPDREEAYRVFPDEGGRLSLTPIDAESAESRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLI-KANDTIKLDLEENKITDFIKFDVGNIVMV 183
KV + G+ ++ +DG + D ND++ +D E +I ++ +V
Sbjct: 120 KVEGKRQVTGGVTQLSLHDGTNVTVDDEATYGVNDSVVVDNESKEIVAHFPYEESALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGSFETI 208
G + G++G + + GS I
Sbjct: 180 VRGNHAGKIGQVAEIDVTPGSGSNI 204
>gi|448302878|ref|ZP_21492828.1| 30S ribosomal protein S4e [Natronorubrum sulfidifaciens JCM 14089]
gi|445593885|gb|ELY48052.1| 30S ribosomal protein S4e [Natronorubrum sulfidifaciens JCM 14089]
Length = 233
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH +E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDVFTVKAGAGPH-GKEGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +L++G D+ P G D+V+ P E +R+ D GR L + ++ A+ +L
Sbjct: 60 LSEDAILINGDPINDEQRPIGMFDIVAFPGREEYYRVFPDEGGRLALTEIDEDAAESRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ Q G + +DG + D +D++ +D ++ I F+ G +V
Sbjct: 120 KIAGKQQVPGGDTQLTLHDGTNVLVEDGSEYNTSDSVVVDNDDKSIVAHFPFEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G + G++G I + GS
Sbjct: 180 VSGNHGGKIGEIDAIDITPGS 200
>gi|284165504|ref|YP_003403783.1| 30S ribosomal protein S4E, central domain-containing protein
[Haloterrigena turkmenica DSM 5511]
gi|284015159|gb|ADB61110.1| Ribosomal protein S4E, central domain protein [Haloterrigena
turkmenica DSM 5511]
Length = 233
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTETFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G+ D+ P G D+V+ P E FR+ D GR L + ++ A +L
Sbjct: 60 LSEDAILVNGEPINDEKRPIGIFDIVAFPGREEYFRVFPDEGGRLALTEIDEDAAGSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ Q G + +DG + D D+I +D ++ I F+ G +V
Sbjct: 120 KIEGKQQVPGGDTQLTLHDGTNVLVEDGSEYDTTDSIVVDNDDKSIVAHFPFEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G + G++G I + GS
Sbjct: 180 VRGNHGGKIGEIDAIDITPGS 200
>gi|413950347|gb|AFW82996.1| hypothetical protein ZEAMMB73_922081 [Zea mays]
Length = 138
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 160 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
+K++LE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 80 VKINLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 130
>gi|448726782|ref|ZP_21709174.1| 30S ribosomal protein S4e [Halococcus morrhuae DSM 1307]
gi|445793828|gb|EMA44399.1| 30S ribosomal protein S4e [Halococcus morrhuae DSM 1307]
Length = 256
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ P W +++ F K ++GPH + +PL++VLR+ L Y +E
Sbjct: 1 MSKHQKRLSVPDSWPVERKTATFTVKAAAGPH-GEQGVPLLIVLRDVLGYVDNRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L Q +L++G D+ P G D+V + +E++R+ D GR L + +A KL
Sbjct: 60 LNQGTILINGDSLDDEERPIGMFDIVEFTERDEHYRVFPDEGGRLALSPIDAADADSKLG 119
Query: 125 KVRSVQFGQKGIPYINT----YDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 180
K+ G+ +P NT +DG T+ D +D+I +D ++ + F ++ G +
Sbjct: 120 KI----VGKGQVPGGNTQLALHDGHTLEIEDGEYAGSDSIVIDHDDEILAHF-PYEEGAL 174
Query: 181 VMVTGGRNRGRVGIIKNREKHKGS 204
V G++ G +G I+ + GS
Sbjct: 175 VTAVRGQHAGEIGEIEEIQVTPGS 198
>gi|413954119|gb|AFW86768.1| hypothetical protein ZEAMMB73_327506 [Zea mays]
Length = 219
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 157 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
N TIK+DLE NKI DFIKFDVGN+VM+TGGRN RVG+IKNREKHKGSFETIH+
Sbjct: 158 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGRNTMRVGVIKNREKHKGSFETIHV 211
>gi|13541168|ref|NP_110856.1| 30S ribosomal protein S4e [Thermoplasma volcanium GSS1]
gi|17368559|sp|Q97BW4.1|RS4E_THEVO RecName: Full=30S ribosomal protein S4e
gi|14324556|dbj|BAB59483.1| ribosomal protein small subunit S4 [Thermoplasma volcanium GSS1]
Length = 235
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 10 KRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRH 69
KRL P+ + + + P P G HK+ + L+ ++R+ L+ + RE IL
Sbjct: 6 KRLMVPRTVKIPRKTYFWGPTPLPGRHKADHSVTLLTIIRDYLRLSDKEREATRILANGL 65
Query: 70 VLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSV 129
V VDGKV ++ + GFMDV+ I + E++R++Y+ +G L S + A K +V++
Sbjct: 66 VKVDGKVVKERKFGVGFMDVIEI--SGESYRVVYNNQGALVLVSESKDRANMKPLQVKNK 123
Query: 130 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNR 189
+ +DGR + D I D + L + KIT+ IK GN +TGG +
Sbjct: 124 VIAPGNKIQLGFHDGRVMVTEDRSISVGDVVIASLPDMKITEIIKMQPGNKAFITGGSHV 183
Query: 190 GRVGIIKNRE-KHKGSFETIHIQDALGHEFATRLGNVFTIG 229
G G I E K S +H + F T +VF IG
Sbjct: 184 GETGTISKIEIKESSSANLVHFDEG----FTTVKDHVFVIG 220
>gi|222480845|ref|YP_002567082.1| 30S ribosomal protein S4e [Halorubrum lacusprofundi ATCC 49239]
gi|254764559|sp|B9LSR5.1|RS4E_HALLT RecName: Full=30S ribosomal protein S4e
gi|222453747|gb|ACM58012.1| Ribosomal protein S4E, central domain protein [Halorubrum
lacusprofundi ATCC 49239]
Length = 240
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLAVPNSWPVERKTNTFTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L VLV+G +D+ P G D+++ P+ E FR+ D GR L S+ +E A +L
Sbjct: 60 LNNDSVLVNGDAISDEQRPIGMFDILAFPERGEFFRVFPDEGGRLALTSVDEEAAGSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ + G + +DG + D D+I +D E + +++ G +V
Sbjct: 120 KITNKSVVPGGDAQLTLHDGTNVLVDADTEYDTKDSIVVDNESKDVVAHFEYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G++ GR+G + + + GS
Sbjct: 180 VAGQHAGRIGEVADIDVTLGS 200
>gi|448671527|ref|ZP_21687432.1| 30S ribosomal protein S4e [Haloarcula amylolytica JCM 13557]
gi|445764989|gb|EMA16129.1| 30S ribosomal protein S4e [Haloarcula amylolytica JCM 13557]
Length = 234
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ H KRL+ P W +++ F K +GPH + +PL++VLR+ L YA +E
Sbjct: 1 MSNHQKRLSVPDSWPVERKTATFTVKAGAGPH-GEDGVPLLIVLRDVLGYADNRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +VL++GK +D+ P G D+++ + E +R+ GR L ++ + A+ KL
Sbjct: 60 LNEDNVLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLALTAIDPDAAESKLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRT-IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 183
K+ + G + +DG T I D A D+I + E+ +I +++ G +V
Sbjct: 120 KIVTKTHVSGGDVQLGLHDGETLIVEDDQTYDAGDSIVVGNEDGEIVAHFEYEEGALVTA 179
Query: 184 TGGRNRGRVGIIKNREKHKGS 204
G + G VG I+ + GS
Sbjct: 180 VDGAHAGEVGEIEEIQVTPGS 200
>gi|413936264|gb|AFW70815.1| hypothetical protein ZEAMMB73_092717 [Zea mays]
Length = 271
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 157 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
N TIK+DLE NKI DFIKFDVGN+VMVT GRN G VG+IKNREKHKGSFETIH+
Sbjct: 210 NGTIKIDLETNKIMDFIKFDVGNVVMVTSGRNTGHVGVIKNREKHKGSFETIHV 263
>gi|414876665|tpg|DAA53796.1| TPA: hypothetical protein ZEAMMB73_994570 [Zea mays]
Length = 266
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 47/54 (87%)
Query: 157 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 210
N TIK+DLE NKI DFIKFDVGN VMVTGGRN RVG+IKN EKHKGSFETIH+
Sbjct: 205 NGTIKIDLETNKIMDFIKFDVGNAVMVTGGRNTVRVGVIKNMEKHKGSFETIHV 258
>gi|448338122|ref|ZP_21527174.1| 30S ribosomal protein S4e [Natrinema pallidum DSM 3751]
gi|445623297|gb|ELY76719.1| 30S ribosomal protein S4e [Natrinema pallidum DSM 3751]
Length = 232
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 2/200 (1%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTETFTVKADAGPH-GEDGVPLVVLLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +L++G D+ P G D+V+ P +E +R+ D GR L + +E A+ +L
Sbjct: 60 LSEDSILINGVPINDEQRPIGMFDIVAFPGRDEYYRVFPDEGGRLALTEIDEESAQSRLG 119
Query: 125 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 184
K+ + Q G + +DG + D + D+I +D ++ + ++ G +V
Sbjct: 120 KIVNKQQVSGGDTQLTLHDGTNVIVDDEY-EPKDSIVIDNDDKSVVAHFPYEEGALVTAV 178
Query: 185 GGRNRGRVGIIKNREKHKGS 204
G + G+VG I + GS
Sbjct: 179 RGNHGGKVGEIDTIDITPGS 198
>gi|448565527|ref|ZP_21636394.1| 30S ribosomal protein S4e [Haloferax prahovense DSM 18310]
gi|445715271|gb|ELZ67027.1| 30S ribosomal protein S4e [Haloferax prahovense DSM 18310]
Length = 247
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 17/220 (7%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAI 64
+ +H KRL+ PK W +++ G F K +GPH E +PL++VLR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPKSWPVERKTGTFTVKAGAGPH-GEEGVPLLIVLRDVLGYVDSKKEAQYA 59
Query: 65 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 124
L + +LV+G V +D P G D+++ + E +R+ D GR L + + A +L
Sbjct: 60 LNHQSILVNGDVASDVRRPIGMFDILAFVQREEYYRVFPDEGGRLALTPIDADSASSRLG 119
Query: 125 K-VRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVM 182
K V Q G G + +DG T+ D D+I +D E + ++ G +V
Sbjct: 120 KIVNKTQVG-GGDFQLTLHDGATLIVEDASEYSGKDSIVVDNETKDVVAHFPYEEGALVT 178
Query: 183 VTGGRNRGRVGIIKN-------------REKHKGSFETIH 209
GR+ G +G I E G FET+
Sbjct: 179 AVNGRHSGEIGEITEIIVTPGSGNNSVVVETEDGEFETVE 218
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.139 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,226,248,454
Number of Sequences: 23463169
Number of extensions: 177885861
Number of successful extensions: 345677
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 344016
Number of HSP's gapped (non-prelim): 1152
length of query: 262
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 122
effective length of database: 9,074,351,707
effective search space: 1107070908254
effective search space used: 1107070908254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)