Query 024796
Match_columns 262
No_of_seqs 124 out of 1092
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 07:28:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024796.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024796hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01249 pro_imino_pep_1 prol 100.0 2.7E-31 5.8E-36 227.4 25.8 251 3-254 54-305 (306)
2 PLN02965 Probable pheophorbida 100.0 1.6E-27 3.4E-32 198.9 16.5 218 2-258 30-253 (255)
3 PLN02824 hydrolase, alpha/beta 100.0 1.1E-26 2.4E-31 197.7 21.3 220 3-256 56-292 (294)
4 TIGR03343 biphenyl_bphD 2-hydr 99.9 2E-26 4.3E-31 194.5 18.2 221 2-255 60-280 (282)
5 PRK10349 carboxylesterase BioH 99.9 1E-25 2.2E-30 188.0 21.8 216 2-257 39-255 (256)
6 TIGR02240 PHA_depoly_arom poly 99.9 2.5E-26 5.4E-31 193.9 18.3 214 2-259 51-267 (276)
7 PRK00870 haloalkane dehalogena 99.9 2.9E-26 6.2E-31 195.9 18.9 222 2-256 73-299 (302)
8 PRK06489 hypothetical protein; 99.9 5.2E-26 1.1E-30 199.0 20.3 227 3-258 106-357 (360)
9 PRK03592 haloalkane dehalogena 99.9 8.9E-26 1.9E-30 192.2 20.1 74 3-78 54-127 (295)
10 PRK07581 hypothetical protein; 99.9 1.4E-25 3E-30 194.8 20.9 239 2-259 71-337 (339)
11 PLN03087 BODYGUARD 1 domain co 99.9 2.2E-25 4.7E-30 199.1 19.2 236 2-256 232-477 (481)
12 PLN02679 hydrolase, alpha/beta 99.9 5.1E-25 1.1E-29 192.6 20.5 226 2-257 114-356 (360)
13 PRK10673 acyl-CoA esterase; Pr 99.9 5.9E-25 1.3E-29 182.8 17.7 212 2-256 42-253 (255)
14 KOG4178 Soluble epoxide hydrol 99.9 1.3E-25 2.8E-30 186.4 13.5 77 3-79 72-148 (322)
15 PRK03204 haloalkane dehalogena 99.9 9.9E-25 2.1E-29 185.1 18.4 76 2-78 60-135 (286)
16 PF12697 Abhydrolase_6: Alpha/ 99.9 1.8E-24 3.8E-29 174.8 17.1 202 2-249 24-227 (228)
17 PRK08775 homoserine O-acetyltr 99.9 2.9E-24 6.4E-29 186.7 18.8 74 2-79 99-173 (343)
18 PF00561 Abhydrolase_1: alpha/ 99.9 1.4E-24 3E-29 177.0 15.4 221 4-259 2-229 (230)
19 PRK11126 2-succinyl-6-hydroxy- 99.9 8.9E-24 1.9E-28 174.5 19.6 75 2-79 27-102 (242)
20 PLN02578 hydrolase 99.9 6.8E-24 1.5E-28 185.2 19.6 231 2-256 112-353 (354)
21 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.1E-23 2.3E-28 173.1 17.1 211 2-255 39-250 (251)
22 TIGR03611 RutD pyrimidine util 99.9 2.4E-23 5.3E-28 172.2 19.0 216 2-255 39-255 (257)
23 TIGR03056 bchO_mg_che_rel puta 99.9 2.7E-23 5.8E-28 174.6 18.7 216 3-255 55-277 (278)
24 TIGR01392 homoserO_Ac_trn homo 99.9 1.5E-23 3.2E-28 182.9 17.3 78 2-79 72-162 (351)
25 PHA02857 monoglyceride lipase; 99.9 3.7E-23 8E-28 174.3 18.5 212 2-257 52-272 (276)
26 TIGR01738 bioH putative pimelo 99.9 8.1E-23 1.8E-27 167.4 19.8 213 2-254 30-244 (245)
27 PLN02385 hydrolase; alpha/beta 99.9 2.8E-23 6E-28 181.0 17.7 216 2-256 115-343 (349)
28 TIGR01250 pro_imino_pep_2 prol 99.9 1.3E-22 2.9E-27 170.2 21.0 230 2-255 53-287 (288)
29 KOG4409 Predicted hydrolase/ac 99.9 8.9E-23 1.9E-27 170.2 18.5 77 3-79 117-195 (365)
30 PLN02298 hydrolase, alpha/beta 99.9 6.4E-23 1.4E-27 177.4 17.4 217 2-257 87-316 (330)
31 PLN03084 alpha/beta hydrolase 99.9 2.2E-22 4.8E-27 176.2 20.9 77 2-78 153-231 (383)
32 PRK10749 lysophospholipase L2; 99.9 9.2E-23 2E-27 176.4 17.5 77 2-78 81-165 (330)
33 PRK00175 metX homoserine O-ace 99.9 1.3E-22 2.8E-27 178.5 18.0 78 2-79 91-182 (379)
34 PLN02894 hydrolase, alpha/beta 99.9 1.2E-21 2.7E-26 173.4 21.1 76 3-79 132-211 (402)
35 KOG1454 Predicted hydrolase/ac 99.9 3.2E-22 7E-27 171.6 16.2 229 3-258 87-324 (326)
36 TIGR03695 menH_SHCHC 2-succiny 99.9 1.6E-21 3.5E-26 159.7 17.5 218 2-255 27-250 (251)
37 PLN02211 methyl indole-3-aceta 99.9 5.3E-21 1.2E-25 161.1 19.3 77 2-79 45-122 (273)
38 PLN02980 2-oxoglutarate decarb 99.9 5E-21 1.1E-25 193.1 21.0 227 2-260 1397-1641(1655)
39 KOG2984 Predicted hydrolase [G 99.9 2.7E-21 6E-26 149.2 9.6 181 2-239 71-258 (277)
40 PRK14875 acetoin dehydrogenase 99.9 4.8E-20 1.1E-24 161.6 18.9 74 3-78 158-231 (371)
41 COG2267 PldB Lysophospholipase 99.9 3.3E-20 7.2E-25 157.6 17.2 77 2-80 61-143 (298)
42 PRK06765 homoserine O-acetyltr 99.9 1.6E-19 3.4E-24 158.6 21.0 77 3-79 100-196 (389)
43 PLN02652 hydrolase; alpha/beta 99.8 5.1E-20 1.1E-24 162.2 17.9 218 2-261 163-390 (395)
44 PLN02511 hydrolase 99.8 6.8E-20 1.5E-24 161.6 15.7 75 2-78 129-209 (388)
45 KOG1455 Lysophospholipase [Lip 99.8 1.3E-18 2.9E-23 142.8 14.2 211 2-254 82-308 (313)
46 PRK05855 short chain dehydroge 99.8 3.1E-18 6.8E-23 158.5 18.4 76 2-77 51-129 (582)
47 KOG2382 Predicted alpha/beta h 99.8 6.9E-18 1.5E-22 140.6 17.7 222 2-257 80-312 (315)
48 TIGR01607 PST-A Plasmodium sub 99.8 2E-18 4.2E-23 149.4 14.4 59 197-255 270-330 (332)
49 TIGR03100 hydr1_PEP hydrolase, 99.8 2.9E-17 6.3E-22 138.5 18.4 202 2-256 57-273 (274)
50 TIGR01838 PHA_synth_I poly(R)- 99.8 7.8E-18 1.7E-22 152.1 15.3 218 2-239 220-457 (532)
51 PRK05077 frsA fermentation/res 99.7 1.4E-16 3.1E-21 141.3 18.4 186 2-256 222-410 (414)
52 TIGR01836 PHA_synth_III_C poly 99.7 1.8E-16 3.8E-21 138.3 18.2 73 2-79 94-171 (350)
53 PRK10985 putative hydrolase; P 99.7 8.4E-17 1.8E-21 138.9 15.0 76 2-78 87-167 (324)
54 COG0596 MhpC Predicted hydrola 99.7 4.7E-16 1E-20 127.3 17.2 73 3-79 51-123 (282)
55 PRK13604 luxD acyl transferase 99.7 4E-16 8.7E-21 131.2 16.4 175 2-241 64-248 (307)
56 PRK11071 esterase YqiA; Provis 99.6 1.8E-14 3.9E-19 114.9 15.4 61 2-78 32-92 (190)
57 KOG1552 Predicted alpha/beta h 99.6 9.1E-15 2E-19 118.0 12.8 161 2-260 88-254 (258)
58 PRK10566 esterase; Provisional 99.6 4.3E-14 9.2E-19 117.3 16.0 76 2-77 54-140 (249)
59 PRK07868 acyl-CoA synthetase; 99.6 1.2E-13 2.6E-18 135.3 18.8 48 191-239 292-340 (994)
60 COG1647 Esterase/lipase [Gener 99.6 1.2E-13 2.5E-18 108.8 14.7 196 2-256 42-242 (243)
61 PLN02872 triacylglycerol lipas 99.5 3.6E-13 7.7E-18 118.6 15.0 77 2-79 107-197 (395)
62 PF00326 Peptidase_S9: Prolyl 99.5 1.5E-12 3.3E-17 105.6 17.0 184 2-260 14-211 (213)
63 TIGR03101 hydr2_PEP hydrolase, 99.5 1.2E-13 2.7E-18 115.1 10.6 76 2-79 56-134 (266)
64 KOG2564 Predicted acetyltransf 99.5 1.4E-13 3.1E-18 111.7 9.4 76 2-79 102-182 (343)
65 PF12695 Abhydrolase_5: Alpha/ 99.5 2.6E-13 5.6E-18 102.9 10.2 119 2-237 26-145 (145)
66 TIGR02821 fghA_ester_D S-formy 99.4 4E-11 8.8E-16 101.2 16.4 77 2-78 72-172 (275)
67 KOG4667 Predicted esterase [Li 99.4 4.7E-12 1E-16 99.3 9.3 70 4-76 64-136 (269)
68 COG2021 MET2 Homoserine acetyl 99.4 1.5E-10 3.3E-15 98.3 18.8 77 3-79 93-182 (368)
69 PLN02442 S-formylglutathione h 99.3 4.9E-11 1.1E-15 101.0 15.8 48 31-78 130-177 (283)
70 TIGR03230 lipo_lipase lipoprot 99.3 5.1E-12 1.1E-16 111.7 9.4 76 2-79 73-154 (442)
71 PF03096 Ndr: Ndr family; Int 99.3 5.2E-11 1.1E-15 98.6 14.3 214 4-255 57-276 (283)
72 KOG2931 Differentiation-relate 99.3 2.5E-10 5.4E-15 93.7 16.3 85 5-89 81-167 (326)
73 KOG4391 Predicted alpha/beta h 99.3 5.1E-12 1.1E-16 99.2 5.7 167 2-256 106-280 (300)
74 PF06342 DUF1057: Alpha/beta h 99.3 7.4E-10 1.6E-14 91.0 18.1 76 1-79 61-137 (297)
75 COG3208 GrsT Predicted thioest 99.2 4.1E-10 8.9E-15 90.7 15.2 76 2-79 33-112 (244)
76 PRK11460 putative hydrolase; P 99.2 2.4E-10 5.3E-15 94.0 12.5 45 197-241 148-196 (232)
77 TIGR01849 PHB_depoly_PhaZ poly 99.2 4E-09 8.7E-14 92.5 18.2 73 3-78 130-207 (406)
78 PF02230 Abhydrolase_2: Phosph 99.1 1E-09 2.3E-14 89.2 11.8 47 31-77 87-138 (216)
79 TIGR01839 PHA_synth_II poly(R) 99.1 1.7E-09 3.7E-14 97.7 13.4 72 2-78 247-327 (560)
80 cd00707 Pancreat_lipase_like P 99.0 4.2E-10 9.1E-15 94.8 5.8 76 2-79 66-147 (275)
81 COG1506 DAP2 Dipeptidyl aminop 99.0 1.3E-08 2.8E-13 95.3 14.8 63 192-255 547-613 (620)
82 PLN00021 chlorophyllase 98.9 9.7E-09 2.1E-13 88.0 11.4 74 2-78 79-165 (313)
83 COG3243 PhaC Poly(3-hydroxyalk 98.9 9.7E-09 2.1E-13 88.7 10.8 76 2-77 139-215 (445)
84 COG0400 Predicted esterase [Ge 98.9 1.8E-08 3.8E-13 80.8 11.0 48 30-77 83-132 (207)
85 PRK10162 acetyl esterase; Prov 98.9 1.8E-07 3.9E-12 80.6 17.6 75 2-78 112-194 (318)
86 PTZ00472 serine carboxypeptida 98.9 3.6E-07 7.8E-12 82.5 20.0 77 3-79 122-216 (462)
87 PLN02733 phosphatidylcholine-s 98.8 5.4E-09 1.2E-13 93.1 6.4 74 5-78 123-200 (440)
88 COG0429 Predicted hydrolase of 98.8 2.2E-07 4.8E-12 78.2 15.1 67 190-257 268-343 (345)
89 TIGR00976 /NonD putative hydro 98.8 6.2E-09 1.4E-13 96.2 6.1 74 2-78 53-131 (550)
90 PRK05371 x-prolyl-dipeptidyl a 98.8 4.7E-07 1E-11 86.3 18.8 74 2-78 279-372 (767)
91 KOG1838 Alpha/beta hydrolase [ 98.8 3.6E-07 7.9E-12 79.4 15.8 75 2-78 154-235 (409)
92 PF06821 Ser_hydrolase: Serine 98.8 4.1E-08 8.9E-13 76.7 8.8 44 197-241 114-157 (171)
93 TIGR01840 esterase_phb esteras 98.7 5.8E-08 1.3E-12 78.7 9.0 77 2-78 43-129 (212)
94 PF05728 UPF0227: Uncharacteri 98.7 4.2E-07 9.2E-12 71.9 13.4 48 28-78 43-90 (187)
95 PF01738 DLH: Dienelactone hyd 98.7 3E-07 6.5E-12 74.8 12.7 44 194-238 143-190 (218)
96 PF06500 DUF1100: Alpha/beta h 98.7 8.5E-07 1.9E-11 77.6 15.9 75 2-78 218-295 (411)
97 PF05448 AXE1: Acetyl xylan es 98.7 1.3E-06 2.9E-11 75.1 17.0 58 192-250 258-316 (320)
98 KOG2565 Predicted hydrolases o 98.7 1.3E-06 2.9E-11 74.3 16.0 72 3-75 189-260 (469)
99 COG2945 Predicted hydrolase of 98.7 3.8E-07 8.3E-12 70.8 11.6 62 2-67 60-126 (210)
100 TIGR03502 lipase_Pla1_cef extr 98.7 7.5E-08 1.6E-12 90.7 8.5 65 2-66 476-577 (792)
101 PF10230 DUF2305: Uncharacteri 98.6 1.6E-06 3.5E-11 72.8 14.5 77 2-78 32-121 (266)
102 COG4757 Predicted alpha/beta h 98.6 4.8E-07 1E-11 72.3 8.9 75 3-79 58-138 (281)
103 PF08538 DUF1749: Protein of u 98.5 2E-07 4.4E-12 78.2 6.7 52 28-79 84-148 (303)
104 PF08840 BAAT_C: BAAT / Acyl-C 98.4 2E-07 4.2E-12 75.7 4.0 48 30-78 5-55 (213)
105 PF00975 Thioesterase: Thioest 98.4 1.4E-06 3E-11 71.1 8.6 73 3-79 28-104 (229)
106 PRK10252 entF enterobactin syn 98.3 2.1E-06 4.5E-11 87.2 9.2 74 2-79 1094-1171(1296)
107 COG3458 Acetyl esterase (deace 98.3 1.7E-05 3.7E-10 65.1 12.1 47 192-239 255-302 (321)
108 PF06057 VirJ: Bacterial virul 98.3 7.5E-06 1.6E-10 64.1 9.2 70 2-78 29-106 (192)
109 smart00824 PKS_TE Thioesterase 98.2 8.9E-06 1.9E-10 64.9 9.4 72 3-78 26-101 (212)
110 PF02129 Peptidase_S15: X-Pro 98.2 4.8E-05 1E-09 64.0 13.1 72 3-77 58-134 (272)
111 PRK10115 protease 2; Provision 98.2 0.00011 2.4E-09 69.7 16.8 76 2-78 474-558 (686)
112 PF07819 PGAP1: PGAP1-like pro 98.1 9.7E-06 2.1E-10 66.3 7.7 75 3-78 40-122 (225)
113 PF08386 Abhydrolase_4: TAP-li 98.1 1.2E-05 2.5E-10 57.5 5.9 43 197-239 34-76 (103)
114 COG3545 Predicted esterase of 98.0 6.5E-05 1.4E-09 57.8 9.8 50 28-78 44-93 (181)
115 PF07859 Abhydrolase_3: alpha/ 98.0 2.3E-05 5.1E-10 63.1 7.2 68 2-78 29-109 (211)
116 COG0412 Dienelactone hydrolase 97.9 7.6E-05 1.7E-09 61.5 9.6 72 3-75 55-142 (236)
117 KOG1553 Predicted alpha/beta h 97.9 3.1E-05 6.8E-10 65.5 6.8 73 3-78 269-344 (517)
118 PF06028 DUF915: Alpha/beta hy 97.9 2.4E-05 5.2E-10 64.9 5.6 45 34-78 93-142 (255)
119 COG3571 Predicted hydrolase of 97.9 0.0008 1.7E-08 51.1 13.0 48 29-76 74-121 (213)
120 PF09752 DUF2048: Uncharacteri 97.9 0.00053 1.2E-08 58.8 13.4 53 199-252 291-347 (348)
121 KOG2100 Dipeptidyl aminopeptid 97.8 0.00028 6E-09 67.5 12.8 77 2-78 558-643 (755)
122 PF12146 Hydrolase_4: Putative 97.8 2.7E-05 5.9E-10 52.6 4.1 37 2-39 43-79 (79)
123 PF03583 LIP: Secretory lipase 97.8 0.00063 1.4E-08 57.9 13.1 43 197-239 219-266 (290)
124 PRK04940 hypothetical protein; 97.8 0.0024 5.1E-08 50.0 15.0 49 200-255 127-177 (180)
125 KOG4627 Kynurenine formamidase 97.8 5.7E-05 1.2E-09 59.5 5.9 47 191-238 202-248 (270)
126 COG3319 Thioesterase domains o 97.8 9.7E-05 2.1E-09 61.3 7.7 74 3-80 27-104 (257)
127 PF11339 DUF3141: Protein of u 97.8 0.0043 9.2E-08 55.8 17.7 37 43-79 139-175 (581)
128 PF00756 Esterase: Putative es 97.7 6.7E-05 1.5E-09 62.1 5.3 49 30-78 98-149 (251)
129 PF05577 Peptidase_S28: Serine 97.7 0.00024 5.2E-09 64.0 8.8 77 2-78 59-147 (434)
130 PF05677 DUF818: Chlamydia CHL 97.6 0.00022 4.7E-09 60.7 7.0 59 2-65 171-236 (365)
131 PF02273 Acyl_transf_2: Acyl t 97.5 0.0057 1.2E-07 49.9 14.0 70 2-75 57-130 (294)
132 PRK10439 enterobactin/ferric e 97.5 0.00063 1.4E-08 60.7 8.7 48 30-77 269-321 (411)
133 PF03959 FSH1: Serine hydrolas 97.3 0.0018 3.8E-08 52.5 9.2 44 194-239 159-203 (212)
134 PF10142 PhoPQ_related: PhoPQ- 97.3 0.013 2.7E-07 51.3 14.4 65 192-261 258-323 (367)
135 COG1075 LipA Predicted acetylt 97.3 0.00058 1.3E-08 59.3 6.1 53 26-78 109-163 (336)
136 cd00741 Lipase Lipase. Lipase 97.3 0.00068 1.5E-08 51.8 5.8 49 30-78 10-66 (153)
137 PF01764 Lipase_3: Lipase (cla 97.2 0.00093 2E-08 50.1 5.7 37 30-66 50-86 (140)
138 PF10503 Esterase_phd: Esteras 97.1 0.0012 2.5E-08 53.7 6.0 48 30-77 81-130 (220)
139 COG0657 Aes Esterase/lipase [L 97.0 0.054 1.2E-06 46.4 15.9 41 198-238 246-288 (312)
140 PF01674 Lipase_2: Lipase (cla 97.0 0.0012 2.7E-08 53.5 5.1 43 29-73 61-103 (219)
141 KOG2112 Lysophospholipase [Lip 97.0 0.012 2.5E-07 46.8 10.4 54 198-256 145-202 (206)
142 PF06259 Abhydrolase_8: Alpha/ 97.0 0.002 4.3E-08 50.4 5.6 50 29-78 89-143 (177)
143 PF02450 LCAT: Lecithin:choles 96.9 0.0018 3.9E-08 57.5 5.8 49 30-78 102-159 (389)
144 PF05990 DUF900: Alpha/beta hy 96.9 0.0022 4.7E-08 52.8 5.8 75 3-78 49-136 (233)
145 PF12715 Abhydrolase_7: Abhydr 96.8 0.0076 1.6E-07 52.5 8.1 74 3-77 161-258 (390)
146 KOG2551 Phospholipase/carboxyh 96.7 0.0066 1.4E-07 48.7 6.9 61 193-255 160-221 (230)
147 KOG1515 Arylacetamide deacetyl 96.7 0.18 3.9E-06 43.8 16.0 57 199-255 270-332 (336)
148 PF12740 Chlorophyllase2: Chlo 96.6 0.0048 1E-07 51.2 5.9 37 42-78 89-130 (259)
149 PF11187 DUF2974: Protein of u 96.6 0.0055 1.2E-07 50.0 5.7 43 34-77 75-121 (224)
150 PF03403 PAF-AH_p_II: Platelet 96.6 0.00095 2.1E-08 58.9 1.4 36 43-79 227-262 (379)
151 COG0627 Predicted esterase [Ge 96.5 0.0045 9.7E-08 53.1 5.3 53 25-77 127-185 (316)
152 PF00151 Lipase: Lipase; Inte 96.5 0.0066 1.4E-07 52.6 6.4 47 34-80 138-188 (331)
153 COG2819 Predicted hydrolase of 96.5 0.0041 8.9E-08 51.4 4.8 49 30-78 120-171 (264)
154 COG4814 Uncharacterized protei 96.5 0.0032 7E-08 51.4 4.1 45 33-77 125-174 (288)
155 KOG2281 Dipeptidyl aminopeptid 96.4 0.0055 1.2E-07 56.2 5.2 72 3-74 677-757 (867)
156 cd00519 Lipase_3 Lipase (class 96.4 0.0055 1.2E-07 50.1 4.9 25 42-66 126-150 (229)
157 PF05057 DUF676: Putative seri 96.4 0.0037 8E-08 50.8 3.6 34 30-63 62-97 (217)
158 KOG2183 Prolylcarboxypeptidase 96.3 0.0097 2.1E-07 52.0 5.8 74 3-76 112-199 (492)
159 COG4099 Predicted peptidase [G 96.3 0.0078 1.7E-07 50.4 4.9 42 36-77 259-302 (387)
160 KOG3724 Negative regulator of 96.2 0.0027 5.9E-08 59.4 2.3 28 45-73 183-210 (973)
161 KOG1551 Uncharacterized conser 96.2 0.22 4.7E-06 41.3 12.7 54 200-254 309-366 (371)
162 COG3150 Predicted esterase [Ge 96.1 0.012 2.6E-07 45.1 4.9 66 4-74 22-87 (191)
163 PLN00413 triacylglycerol lipas 96.0 0.02 4.2E-07 51.3 6.5 35 29-63 269-303 (479)
164 PLN02162 triacylglycerol lipas 96.0 0.017 3.6E-07 51.6 6.1 34 30-63 264-297 (475)
165 PLN02571 triacylglycerol lipas 96.0 0.012 2.6E-07 52.0 5.0 36 29-64 209-246 (413)
166 KOG2624 Triglyceride lipase-ch 95.9 0.12 2.7E-06 45.8 11.0 49 31-79 148-199 (403)
167 PLN02454 triacylglycerol lipas 95.9 0.016 3.6E-07 51.1 5.4 35 30-64 212-248 (414)
168 PF00450 Peptidase_S10: Serine 95.7 0.029 6.3E-07 50.0 6.6 79 2-80 85-182 (415)
169 KOG3043 Predicted hydrolase re 95.7 0.051 1.1E-06 43.8 7.1 49 189-238 157-211 (242)
170 KOG2182 Hydrolytic enzymes of 95.7 0.038 8.3E-07 49.5 6.8 77 2-78 118-206 (514)
171 COG1073 Hydrolases of the alph 95.6 0.035 7.7E-07 46.3 6.3 68 189-256 224-295 (299)
172 PLN02408 phospholipase A1 95.5 0.026 5.5E-07 49.2 5.1 37 30-66 184-222 (365)
173 PLN02213 sinapoylglucose-malat 95.5 0.055 1.2E-06 46.7 7.2 76 3-78 2-95 (319)
174 COG3509 LpqC Poly(3-hydroxybut 95.4 0.06 1.3E-06 45.2 6.8 48 30-77 128-177 (312)
175 PF04301 DUF452: Protein of un 95.4 0.57 1.2E-05 37.8 12.2 34 42-77 55-89 (213)
176 PF07224 Chlorophyllase: Chlor 95.3 0.026 5.6E-07 46.6 4.2 38 42-79 118-157 (307)
177 PF01083 Cutinase: Cutinase; 95.1 0.055 1.2E-06 42.6 5.6 48 31-78 68-121 (179)
178 COG4782 Uncharacterized protei 95.0 0.051 1.1E-06 46.9 5.5 48 30-77 177-232 (377)
179 PLN02934 triacylglycerol lipas 95.0 0.04 8.7E-07 49.8 5.0 35 29-63 306-340 (515)
180 PLN02310 triacylglycerol lipas 95.0 0.04 8.7E-07 48.6 4.9 36 29-64 190-229 (405)
181 PF05277 DUF726: Protein of un 94.8 0.049 1.1E-06 47.2 4.8 39 41-79 217-260 (345)
182 KOG3253 Predicted alpha/beta h 94.7 0.12 2.7E-06 47.4 7.2 70 191-261 299-381 (784)
183 PLN02753 triacylglycerol lipas 94.7 0.055 1.2E-06 49.1 5.0 35 30-64 293-332 (531)
184 COG2936 Predicted acyl esteras 94.7 0.076 1.7E-06 48.8 5.9 75 3-77 81-157 (563)
185 PLN02324 triacylglycerol lipas 94.7 0.06 1.3E-06 47.6 5.1 35 30-64 199-235 (415)
186 PLN02802 triacylglycerol lipas 94.7 0.056 1.2E-06 48.9 5.0 36 30-65 314-351 (509)
187 KOG3101 Esterase D [General fu 94.6 0.0045 9.8E-08 49.3 -1.7 53 25-77 117-174 (283)
188 PLN03037 lipase class 3 family 94.4 0.065 1.4E-06 48.6 4.9 35 30-64 300-338 (525)
189 PF05705 DUF829: Eukaryotic pr 94.4 0.044 9.4E-07 45.1 3.5 58 197-254 178-239 (240)
190 KOG2369 Lecithin:cholesterol a 94.4 0.062 1.3E-06 47.9 4.5 38 31-68 169-206 (473)
191 PLN02719 triacylglycerol lipas 94.3 0.073 1.6E-06 48.2 4.9 35 30-64 279-318 (518)
192 PLN02761 lipase class 3 family 94.3 0.074 1.6E-06 48.3 4.9 35 29-63 273-313 (527)
193 COG2382 Fes Enterochelin ester 94.0 0.036 7.9E-07 46.6 2.3 33 45-77 178-210 (299)
194 COG4188 Predicted dienelactone 93.6 0.07 1.5E-06 46.3 3.3 52 191-243 246-301 (365)
195 PLN02517 phosphatidylcholine-s 93.6 0.11 2.4E-06 48.0 4.6 48 30-77 195-261 (642)
196 PF12048 DUF3530: Protein of u 93.4 0.21 4.6E-06 42.9 6.0 43 37-79 186-229 (310)
197 KOG4840 Predicted hydrolases o 93.4 0.085 1.8E-06 42.5 3.2 51 28-78 87-143 (299)
198 cd00312 Esterase_lipase Estera 93.4 0.24 5.3E-06 45.3 6.7 74 3-77 126-211 (493)
199 KOG4569 Predicted lipase [Lipi 93.0 0.17 3.7E-06 44.0 4.8 36 29-64 156-191 (336)
200 PLN02847 triacylglycerol lipas 92.5 0.2 4.3E-06 46.3 4.7 21 44-64 251-271 (633)
201 COG3946 VirJ Type IV secretory 92.4 0.23 5E-06 43.6 4.7 59 1-66 286-348 (456)
202 PF06850 PHB_depo_C: PHB de-po 92.0 5.3 0.00011 31.8 12.5 48 191-238 128-180 (202)
203 KOG3847 Phospholipase A2 (plat 91.6 0.074 1.6E-06 45.1 0.8 46 33-79 230-275 (399)
204 PLN02633 palmitoyl protein thi 91.5 0.47 1E-05 40.4 5.5 34 45-78 95-130 (314)
205 COG2939 Carboxypeptidase C (ca 91.4 0.4 8.6E-06 43.3 5.3 74 3-76 147-233 (498)
206 PF11144 DUF2920: Protein of u 91.2 0.46 1E-05 41.9 5.3 34 45-78 185-218 (403)
207 PF11288 DUF3089: Protein of u 91.0 0.62 1.3E-05 37.4 5.5 32 34-65 84-116 (207)
208 PLN02606 palmitoyl-protein thi 90.8 0.57 1.2E-05 39.8 5.4 34 45-78 96-131 (306)
209 PLN02213 sinapoylglucose-malat 90.8 0.77 1.7E-05 39.6 6.4 57 197-255 233-314 (319)
210 PLN03016 sinapoylglucose-malat 90.7 0.65 1.4E-05 41.9 6.1 77 2-78 115-209 (433)
211 PLN02209 serine carboxypeptida 89.2 1.1 2.3E-05 40.5 6.2 78 2-79 117-212 (437)
212 PF10340 DUF2424: Protein of u 88.6 1.5 3.3E-05 38.5 6.5 51 29-79 180-235 (374)
213 PF00450 Peptidase_S10: Serine 87.4 0.72 1.6E-05 41.0 3.9 58 197-255 330-413 (415)
214 PF02089 Palm_thioest: Palmito 87.0 1.3 2.8E-05 37.3 4.9 35 44-78 80-115 (279)
215 PLN02209 serine carboxypeptida 86.9 2 4.3E-05 38.9 6.4 57 197-255 351-432 (437)
216 KOG3967 Uncharacterized conser 86.8 0.84 1.8E-05 36.7 3.5 38 41-78 187-226 (297)
217 PF05576 Peptidase_S37: PS-10 86.4 0.3 6.6E-06 43.1 1.0 72 3-74 89-164 (448)
218 COG4553 DepA Poly-beta-hydroxy 86.4 20 0.00043 30.6 15.7 55 24-79 150-209 (415)
219 PLN03016 sinapoylglucose-malat 86.3 2.3 5E-05 38.4 6.5 57 197-255 347-428 (433)
220 KOG1282 Serine carboxypeptidas 84.7 2.5 5.3E-05 38.3 5.8 62 2-63 117-187 (454)
221 KOG3975 Uncharacterized conser 81.8 4.6 0.0001 33.5 5.8 41 198-238 243-284 (301)
222 smart00827 PKS_AT Acyl transfe 81.2 2.1 4.5E-05 36.3 3.9 28 35-62 73-100 (298)
223 PF00698 Acyl_transf_1: Acyl t 79.6 1.5 3.3E-05 37.7 2.6 29 34-62 74-102 (318)
224 PF07082 DUF1350: Protein of u 79.5 3.1 6.7E-05 34.4 4.1 33 45-77 91-123 (250)
225 COG4947 Uncharacterized protei 79.5 0.85 1.8E-05 35.4 0.8 33 45-77 102-134 (227)
226 KOG2029 Uncharacterized conser 78.6 3.3 7.2E-05 38.4 4.4 33 45-77 527-570 (697)
227 TIGR03131 malonate_mdcH malona 78.2 3 6.6E-05 35.3 4.0 30 34-63 66-95 (295)
228 TIGR00128 fabD malonyl CoA-acy 77.9 2.9 6.3E-05 35.2 3.8 29 35-63 73-102 (290)
229 KOG4372 Predicted alpha/beta h 76.3 1.1 2.4E-05 39.5 0.7 31 29-59 135-165 (405)
230 PRK10279 hypothetical protein; 74.8 3.2 6.9E-05 35.5 3.2 36 36-71 25-60 (300)
231 TIGR01840 esterase_phb esteras 74.7 2.2 4.8E-05 34.2 2.1 26 198-223 169-194 (212)
232 cd07225 Pat_PNPLA6_PNPLA7 Pata 74.0 5.1 0.00011 34.4 4.2 32 35-66 34-65 (306)
233 COG1770 PtrB Protease II [Amin 73.2 7.3 0.00016 36.7 5.2 55 24-78 505-561 (682)
234 COG5153 CVT17 Putative lipase 72.7 6.1 0.00013 33.4 4.1 29 37-65 269-297 (425)
235 KOG4540 Putative lipase essent 72.7 6.1 0.00013 33.4 4.1 29 37-65 269-297 (425)
236 PF05576 Peptidase_S37: PS-10 71.5 8 0.00017 34.5 4.8 55 198-254 352-410 (448)
237 cd07227 Pat_Fungal_NTE1 Fungal 71.3 6.7 0.00014 33.0 4.2 30 36-65 30-59 (269)
238 PF08237 PE-PPE: PE-PPE domain 70.1 11 0.00023 30.8 5.1 22 44-65 48-69 (225)
239 TIGR03712 acc_sec_asp2 accesso 69.9 4.1 8.8E-05 37.0 2.7 36 30-65 341-378 (511)
240 COG4188 Predicted dienelactone 69.7 3.4 7.4E-05 36.1 2.2 27 41-67 156-182 (365)
241 cd07198 Patatin Patatin-like p 69.5 7.5 0.00016 30.1 3.9 32 34-66 17-48 (172)
242 KOG1282 Serine carboxypeptidas 68.1 11 0.00024 34.2 5.1 42 198-239 364-430 (454)
243 COG1752 RssA Predicted esteras 67.9 7.8 0.00017 33.2 4.1 34 34-67 29-62 (306)
244 TIGR02816 pfaB_fam PfaB family 67.6 6.9 0.00015 36.4 3.8 31 35-65 255-286 (538)
245 PF07519 Tannase: Tannase and 66.5 14 0.00031 33.8 5.6 44 36-79 104-150 (474)
246 cd07207 Pat_ExoU_VipD_like Exo 66.2 9 0.0002 30.1 3.9 33 33-66 17-49 (194)
247 KOG1283 Serine carboxypeptidas 65.2 15 0.00032 31.8 4.9 67 4-70 73-148 (414)
248 cd07210 Pat_hypo_W_succinogene 64.8 12 0.00026 30.4 4.4 32 34-66 19-50 (221)
249 cd07212 Pat_PNPLA9 Patatin-lik 63.2 11 0.00023 32.5 4.0 35 31-65 15-53 (312)
250 KOG2541 Palmitoyl protein thio 60.9 25 0.00054 29.6 5.4 48 30-77 73-126 (296)
251 PF00135 COesterase: Carboxyle 58.5 13 0.00028 34.1 3.9 40 38-77 200-243 (535)
252 cd07230 Pat_TGL4-5_like Triacy 57.3 10 0.00023 34.1 3.0 41 32-73 90-130 (421)
253 KOG2385 Uncharacterized conser 56.8 16 0.00034 33.6 3.9 39 41-79 444-487 (633)
254 cd07209 Pat_hypo_Ecoli_Z1214_l 56.8 19 0.0004 29.1 4.2 30 38-67 20-49 (215)
255 KOG1202 Animal-type fatty acid 56.4 42 0.0009 34.6 6.9 37 43-79 2181-2219(2376)
256 COG4287 PqaA PhoPQ-activated p 56.1 21 0.00046 31.4 4.5 63 193-260 326-389 (507)
257 cd07228 Pat_NTE_like_bacteria 55.4 20 0.00044 27.7 4.1 33 34-67 19-51 (175)
258 PF09949 DUF2183: Uncharacteri 55.0 30 0.00064 24.3 4.4 44 31-74 52-97 (100)
259 cd07231 Pat_SDP1-like Sugar-De 54.6 15 0.00032 31.7 3.4 42 31-73 84-125 (323)
260 cd07232 Pat_PLPL Patain-like p 53.8 13 0.00029 33.3 3.1 43 31-74 83-125 (407)
261 KOG2237 Predicted serine prote 53.1 26 0.00056 33.1 4.8 70 5-75 502-580 (712)
262 PF10503 Esterase_phd: Esteras 52.9 13 0.00028 30.3 2.6 27 197-223 169-195 (220)
263 PF10605 3HBOH: 3HB-oligomer h 52.6 15 0.00031 34.5 3.1 69 194-262 552-638 (690)
264 KOG3043 Predicted hydrolase re 51.5 5.4 0.00012 32.5 0.2 47 30-77 102-152 (242)
265 PF07519 Tannase: Tannase and 51.2 21 0.00045 32.7 4.0 41 198-238 354-406 (474)
266 cd07229 Pat_TGL3_like Triacylg 50.5 16 0.00036 32.4 3.1 37 38-74 105-141 (391)
267 PF02972 Phycoerythr_ab: Phyco 49.7 13 0.00029 22.8 1.6 14 4-17 4-17 (57)
268 cd01714 ETF_beta The electron 49.3 34 0.00075 27.3 4.6 41 24-65 90-134 (202)
269 cd07208 Pat_hypo_Ecoli_yjju_li 49.3 29 0.00064 28.8 4.4 36 34-70 17-53 (266)
270 cd07205 Pat_PNPLA6_PNPLA7_NTE1 49.0 33 0.00071 26.4 4.3 27 39-65 23-49 (175)
271 cd07222 Pat_PNPLA4 Patatin-lik 48.6 22 0.00048 29.4 3.5 39 31-71 15-57 (246)
272 PF14253 AbiH: Bacteriophage a 47.5 16 0.00035 30.3 2.5 16 42-57 233-248 (270)
273 cd07224 Pat_like Patatin-like 44.9 34 0.00074 28.0 4.0 37 31-68 15-53 (233)
274 COG2272 PnbA Carboxylesterase 43.5 30 0.00066 31.6 3.7 44 34-77 168-215 (491)
275 PF05577 Peptidase_S28: Serine 42.4 35 0.00076 30.7 4.0 50 199-251 378-431 (434)
276 cd07206 Pat_TGL3-4-5_SDP1 Tria 41.8 40 0.00088 28.8 4.0 38 31-69 85-122 (298)
277 KOG3253 Predicted alpha/beta h 39.8 8.4 0.00018 36.0 -0.4 38 39-76 245-283 (784)
278 cd08769 DAP_dppA_2 Peptidase M 39.6 94 0.002 26.2 5.8 36 197-238 147-183 (270)
279 COG4667 Predicted esterase of 39.1 39 0.00085 28.4 3.4 45 31-75 27-71 (292)
280 cd07221 Pat_PNPLA3 Patatin-lik 37.2 39 0.00085 28.1 3.2 42 31-73 16-62 (252)
281 cd07204 Pat_PNPLA_like Patatin 36.0 62 0.0013 26.7 4.2 37 33-70 17-58 (243)
282 PLN02752 [acyl-carrier protein 35.1 41 0.0009 29.2 3.2 27 36-62 110-142 (343)
283 COG1576 Uncharacterized conser 34.6 91 0.002 23.8 4.5 41 3-54 68-108 (155)
284 TIGR02813 omega_3_PfaA polyket 34.1 42 0.00091 37.6 3.6 28 35-62 665-692 (2582)
285 cd07218 Pat_iPLA2 Calcium-inde 33.6 71 0.0015 26.4 4.2 41 31-71 16-58 (245)
286 KOG1516 Carboxylesterase and r 33.4 1.1E+02 0.0024 28.3 5.9 39 38-76 187-229 (545)
287 COG0331 FabD (acyl-carrier-pro 33.0 50 0.0011 28.4 3.3 22 42-63 83-104 (310)
288 PF11713 Peptidase_C80: Peptid 32.1 33 0.00071 26.3 1.8 47 10-56 61-116 (157)
289 cd07217 Pat17_PNPLA8_PNPLA9_li 31.6 41 0.0009 29.4 2.6 19 47-65 44-62 (344)
290 cd07211 Pat_PNPLA8 Patatin-lik 31.4 58 0.0012 27.8 3.4 33 31-63 24-60 (308)
291 PRK10319 N-acetylmuramoyl-l-al 30.4 76 0.0016 27.0 3.9 40 4-44 57-101 (287)
292 cd01819 Patatin_and_cPLA2 Pata 29.9 98 0.0021 23.4 4.2 28 34-62 17-46 (155)
293 TIGR03607 patatin-related prot 29.8 71 0.0015 31.1 4.0 33 31-63 50-85 (739)
294 PRK14194 bifunctional 5,10-met 29.4 94 0.002 26.7 4.3 34 31-64 143-182 (301)
295 PRK14759 potassium-transportin 28.7 52 0.0011 17.4 1.7 17 53-69 7-29 (29)
296 cd07220 Pat_PNPLA2 Patatin-lik 27.9 97 0.0021 25.7 4.1 36 31-67 20-59 (249)
297 COG0218 Predicted GTPase [Gene 27.5 42 0.0009 26.9 1.7 14 5-18 72-85 (200)
298 cd00382 beta_CA Carbonic anhyd 27.2 72 0.0016 23.1 2.9 31 29-59 44-74 (119)
299 cd07213 Pat17_PNPLA8_PNPLA9_li 26.6 56 0.0012 27.6 2.5 19 47-65 37-55 (288)
300 PF10081 Abhydrolase_9: Alpha/ 25.8 85 0.0018 26.7 3.3 35 44-78 109-146 (289)
301 PLN00179 acyl- [acyl-carrier p 25.7 83 0.0018 27.8 3.4 64 8-73 288-363 (390)
302 PRK11789 N-acetyl-anhydromuran 25.2 64 0.0014 25.5 2.4 24 30-53 135-158 (185)
303 TIGR02883 spore_cwlD N-acetylm 24.9 1.8E+02 0.0038 22.8 5.0 39 5-44 2-45 (189)
304 PF01734 Patatin: Patatin-like 24.9 64 0.0014 24.4 2.4 21 45-65 28-48 (204)
305 PF15566 Imm18: Immunity prote 24.3 71 0.0015 19.5 1.9 28 29-56 6-33 (52)
306 PF03405 FA_desaturase_2: Fatt 23.7 66 0.0014 28.0 2.4 63 8-72 231-305 (330)
307 KOG2237 Predicted serine prote 23.1 2.7E+02 0.0059 26.7 6.3 58 199-257 634-702 (712)
308 COG3887 Predicted signaling pr 23.1 1.3E+02 0.0028 28.4 4.2 34 43-77 337-376 (655)
309 cd03379 beta_CA_cladeD Carboni 23.1 1.1E+02 0.0025 22.8 3.4 31 29-59 41-71 (142)
310 COG4099 Predicted peptidase [G 22.9 50 0.0011 28.4 1.5 26 191-216 309-334 (387)
311 PF05705 DUF829: Eukaryotic pr 22.6 2.6E+02 0.0056 22.6 5.7 48 30-77 50-110 (240)
312 PF13709 DUF4159: Domain of un 22.3 2.2E+02 0.0048 22.8 5.1 42 197-238 53-95 (207)
313 PRK06100 DNA polymerase III su 22.3 1E+02 0.0022 22.9 2.9 22 35-71 6-27 (132)
314 PRK14567 triosephosphate isome 21.9 63 0.0014 26.9 1.9 47 200-253 203-249 (253)
315 TIGR00419 tim triosephosphate 21.1 69 0.0015 25.8 1.9 16 36-52 75-90 (205)
316 KOG2214 Predicted esterase of 21.1 57 0.0012 30.0 1.5 43 31-74 190-232 (543)
317 TIGR00246 tRNA_RlmH_YbeA rRNA 20.9 1.7E+02 0.0037 22.3 4.0 9 34-42 56-64 (153)
318 PF12740 Chlorophyllase2: Chlo 20.9 2E+02 0.0043 24.1 4.6 43 197-239 154-207 (259)
319 KOG1643 Triosephosphate isomer 20.7 71 0.0015 25.7 1.8 16 37-53 81-96 (247)
320 PF02590 SPOUT_MTase: Predicte 20.3 1.5E+02 0.0033 22.6 3.5 41 3-54 68-109 (155)
No 1
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=100.00 E-value=2.7e-31 Score=227.43 Aligned_cols=251 Identities=62% Similarity=1.076 Sum_probs=159.7
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccchh
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 82 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~~ 82 (262)
.+||++|+||||+|+++.....++.+++++|+..+++++++++++++||||||.+++.++.++|++|+++|+++++....
T Consensus 54 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~ 133 (306)
T TIGR01249 54 YRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLRE 133 (306)
T ss_pred CEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCH
Confidence 58999999999999865322235666899999999999999999999999999999999999999999999998765322
Q ss_pred hhhhHHHhccccccCHHHHHHHHhhCChhhh-hHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCCCCc
Q 024796 83 KEIDWFYEGGAAAIYPDAWESFRDLIPENER-SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGED 161 (262)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (262)
....|.+..+...+.+..+..+...++...+ ..+...+...+..............|..|.. .......++.......
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 212 (306)
T TIGR01249 134 KEWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWES-TTLLRPINEIVSTAED 212 (306)
T ss_pred HHHHHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhC-hhhcCCCCCccccccc
Confidence 2223332222222334444444433333222 3445555554444433322233333333432 1111111111111111
Q ss_pred hHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCCch
Q 024796 162 DIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP 241 (262)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~~~ 241 (262)
......+..+...+....++...+..++..+.++.++|+|+|+|++|.++|...++.+++.+|++++++++++||+++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 292 (306)
T TIGR01249 213 FKFSLAFARLENHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAFDP 292 (306)
T ss_pred hHHHHHHHHHHHhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCCCCh
Confidence 11222222222222222222111122344566774489999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH
Q 024796 242 GIAAELVATNEKL 254 (262)
Q Consensus 242 ~~~~~~~~~~~~~ 254 (262)
+..+++++.+.+|
T Consensus 293 ~~~~~i~~~~~~~ 305 (306)
T TIGR01249 293 NNLAALVHALETY 305 (306)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998887
No 2
>PLN02965 Probable pheophorbidase
Probab=99.95 E-value=1.6e-27 Score=198.92 Aligned_cols=218 Identities=12% Similarity=0.091 Sum_probs=127.7
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC-ceEEEEeChhHHHHHHHHHhCccchheeeEeccccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP-EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 80 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~-~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~ 80 (262)
..+||++|+||||+|+.+.. ..++..++++|+.+++++|++. +++|+||||||.|++.+|.+||++|+++|++++...
T Consensus 30 ~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 108 (255)
T PLN02965 30 GFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMV 108 (255)
T ss_pred CceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccC
Confidence 36899999999999975432 2456778999999999999984 999999999999999999999999999999887521
Q ss_pred hhhh--hhHHHhccccccCHHHHHHH-HhhCChhhhhHHH-HHHH-HHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 024796 81 RKKE--IDWFYEGGAAAIYPDAWESF-RDLIPENERSCFV-DAYS-KRLNSDDKETQYAAARAWTKWEMMTAHLLPNEEN 155 (262)
Q Consensus 81 ~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (262)
.... .......... ....+... ............. ..+. ..+.......... + . ...+ .+..
T Consensus 109 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~---~~~~--~~~~ 175 (255)
T PLN02965 109 KPGSIISPRLKNVMEG--TEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYT----L--S---SKLL--RPAP 175 (255)
T ss_pred CCCCCccHHHHhhhhc--cccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHH----H--H---HHhc--CCCC
Confidence 1000 0000000000 00000000 0000000000000 0000 0000000000000 0 0 0000 0000
Q ss_pred cCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCC
Q 024796 156 IKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAG 235 (262)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aG 235 (262)
. . .+.. -.++...+..+ ++|||+|+|++|.++|...++.+++.+|+++++++++||
T Consensus 176 ~--------------------~--~~~~-~~~~~~~~~~i-~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~G 231 (255)
T PLN02965 176 V--------------------R--AFQD-LDKLPPNPEAE-KVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSD 231 (255)
T ss_pred C--------------------c--chhh-hhhccchhhcC-CCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCC
Confidence 0 0 0000 00111234567 599999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHH
Q 024796 236 HSANEPGIAAELVATNEKLKNLI 258 (262)
Q Consensus 236 H~~~~~~~~~~~~~~~~~~~~~~ 258 (262)
|+++.+ .++++.+.+.+|..-+
T Consensus 232 H~~~~e-~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 232 HSAFFS-VPTTLFQYLLQAVSSL 253 (255)
T ss_pred Cchhhc-CHHHHHHHHHHHHHHh
Confidence 999865 4777777777776543
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=1.1e-26 Score=197.71 Aligned_cols=220 Identities=16% Similarity=0.132 Sum_probs=129.6
Q ss_pred eeEEeecCCCCCCCCCCCCC-----CCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 3 VQEEALHQRGAGKSTPHACL-----DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~-----~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
.+||++|+||||+|+++.+. ..++..++++|+.++++++++++++|+||||||.+|+.+|.++|++|++||++++
T Consensus 56 ~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~ 135 (294)
T PLN02824 56 HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINI 135 (294)
T ss_pred CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECC
Confidence 58999999999999864311 1356778999999999999999999999999999999999999999999999987
Q ss_pred ccchh--hhhhHHHhccccccCHHHHHHHHhhCChhh----------hhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHh
Q 024796 78 FLLRK--KEIDWFYEGGAAAIYPDAWESFRDLIPENE----------RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMM 145 (262)
Q Consensus 78 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (262)
..... .....+ .......+...+.... ....+..+......+......+.... +
T Consensus 136 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--- 201 (294)
T PLN02824 136 SLRGLHIKKQPWL--------GRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEA---I--- 201 (294)
T ss_pred Ccccccccccchh--------hhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHH---H---
Confidence 43110 000000 0000000000000000 00000000000000000000000000 0
Q ss_pred hhcCCCCccccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCC
Q 024796 146 TAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE 225 (262)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~ 225 (262)
.. +. .. .. ....+.. + . .+.. .......+.++ ++|||+|+|++|.++|.+.++.+.+.+++
T Consensus 202 ~~-----~~-~~---~~-~~~~~~~----~-~--~~~~-~~~~~~~l~~i-~~P~lvi~G~~D~~~~~~~~~~~~~~~~~ 262 (294)
T PLN02824 202 LR-----PG-LE---PG-AVDVFLD----F-I--SYSG-GPLPEELLPAV-KCPVLIAWGEKDPWEPVELGRAYANFDAV 262 (294)
T ss_pred Hh-----cc-CC---ch-HHHHHHH----H-h--cccc-ccchHHHHhhc-CCCeEEEEecCCCCCChHHHHHHHhcCCc
Confidence 00 00 00 00 0000000 0 0 0000 01112346778 59999999999999999888889888899
Q ss_pred CeEEEeCCCCCCCCchhHHHHHHHHHHHHHH
Q 024796 226 ADFKVVADAGHSANEPGIAAELVATNEKLKN 256 (262)
Q Consensus 226 ~~~~~i~~aGH~~~~~~~~~~~~~~~~~~~~ 256 (262)
+++++++++||+++.+ .++++.+.+.+|.+
T Consensus 263 ~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 292 (294)
T PLN02824 263 EDFIVLPGVGHCPQDE-APELVNPLIESFVA 292 (294)
T ss_pred cceEEeCCCCCChhhh-CHHHHHHHHHHHHh
Confidence 9999999999999865 57788888888864
No 4
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.95 E-value=2e-26 Score=194.54 Aligned_cols=221 Identities=18% Similarity=0.181 Sum_probs=126.9
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
.++|+++|+||||+|+.+.. .......+++|+.++++++++++++++||||||++++.+|.++|++|+++|++++....
T Consensus 60 ~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 138 (282)
T TIGR03343 60 GYRVILKDSPGFNKSDAVVM-DEQRGLVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLG 138 (282)
T ss_pred CCEEEEECCCCCCCCCCCcC-cccccchhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCC
Confidence 37999999999999985421 11122257899999999999999999999999999999999999999999999864211
Q ss_pred hhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCCCCc
Q 024796 82 KKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGED 161 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (262)
... .. . .....+..+.......... ....+......+.......... ..|... ...++
T Consensus 139 ~~~----~~-~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~------- 196 (282)
T TIGR03343 139 PSL----FA-P---MPMEGIKLLFKLYAEPSYE-TLKQMLNVFLFDQSLITEELLQ--GRWENI----QRQPE------- 196 (282)
T ss_pred ccc----cc-c---CchHHHHHHHHHhcCCCHH-HHHHHHhhCccCcccCcHHHHH--hHHHHh----hcCHH-------
Confidence 000 00 0 0000000000000000000 0011100000000000000000 000000 00000
Q ss_pred hHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCCch
Q 024796 162 DIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP 241 (262)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~~~ 241 (262)
.. ..+.. .. ...... ..+....++++ ++|+|+++|++|.+++.+.++++++.+|++++++++++||+++.+
T Consensus 197 -~~-~~~~~---~~--~~~~~~-~~~~~~~l~~i-~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e 267 (282)
T TIGR03343 197 -HL-KNFLI---SS--QKAPLS-TWDVTARLGEI-KAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWE 267 (282)
T ss_pred -HH-HHHHH---hc--cccccc-cchHHHHHhhC-CCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCccc
Confidence 00 00000 00 000000 12233457788 599999999999999998899999999999999999999999755
Q ss_pred hHHHHHHHHHHHHH
Q 024796 242 GIAAELVATNEKLK 255 (262)
Q Consensus 242 ~~~~~~~~~~~~~~ 255 (262)
.++++.+++.+|.
T Consensus 268 -~p~~~~~~i~~fl 280 (282)
T TIGR03343 268 -HADAFNRLVIDFL 280 (282)
T ss_pred -CHHHHHHHHHHHh
Confidence 4667777777775
No 5
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.95 E-value=1e-25 Score=187.97 Aligned_cols=216 Identities=19% Similarity=0.208 Sum_probs=125.1
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
..+||++|+||||+|+.+. .++..++++++. ++++++++|+||||||.+|+.+|.++|++|++|||+++.+..
T Consensus 39 ~~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~----~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~ 111 (256)
T PRK10349 39 HFTLHLVDLPGFGRSRGFG---ALSLADMAEAVL----QQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCF 111 (256)
T ss_pred CCEEEEecCCCCCCCCCCC---CCCHHHHHHHHH----hcCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccce
Confidence 3689999999999997532 345555666654 467899999999999999999999999999999999875321
Q ss_pred hhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCCCC
Q 024796 82 KKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL-NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGE 160 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (262)
.....+. .........+...+.. ........+.... ..... .... ...+. .... ..+ . ..
T Consensus 112 ~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~---~~~~---~~~--~--~~ 172 (256)
T PRK10349 112 SARDEWP------GIKPDVLAGFQQQLSD-DFQRTVERFLALQTMGTET-ARQD-ARALK---KTVL---ALP--M--PE 172 (256)
T ss_pred ecCCCCC------cccHHHHHHHHHHHHh-chHHHHHHHHHHHHccCch-HHHH-HHHHH---HHhh---ccC--C--Cc
Confidence 1000000 0000000011100000 0001111111100 00000 0000 00000 0000 000 0 00
Q ss_pred chHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCCc
Q 024796 161 DDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 240 (262)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~~ 240 (262)
.......+. .+. ..+..+.+.++ ++|||||+|++|.++|.+.++.+++.+|+++++++|++||+++.
T Consensus 173 ~~~~~~~~~-----~~~-------~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~ 239 (256)
T PRK10349 173 VDVLNGGLE-----ILK-------TVDLRQPLQNV-SMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFI 239 (256)
T ss_pred HHHHHHHHH-----HHH-------hCccHHHHhhc-CCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccc
Confidence 000000000 000 11234467788 59999999999999999888999999999999999999999987
Q ss_pred hhHHHHHHHHHHHHHHH
Q 024796 241 PGIAAELVATNEKLKNL 257 (262)
Q Consensus 241 ~~~~~~~~~~~~~~~~~ 257 (262)
+ .+++|.+++.+|+..
T Consensus 240 e-~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 240 S-HPAEFCHLLVALKQR 255 (256)
T ss_pred c-CHHHHHHHHHHHhcc
Confidence 5 588888888888754
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.95 E-value=2.5e-26 Score=193.86 Aligned_cols=214 Identities=17% Similarity=0.187 Sum_probs=129.8
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
..+||++|+||||+|+.+. ..++..++++|+.++++++++++++|+||||||.+|+.+|.++|++|++|||+++....
T Consensus 51 ~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~ 128 (276)
T TIGR02240 51 DLEVIAFDVPGVGGSSTPR--HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGA 128 (276)
T ss_pred CceEEEECCCCCCCCCCCC--CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCcc
Confidence 4689999999999997543 24567789999999999999999999999999999999999999999999999875421
Q ss_pred hhhhhHHHhccccccCHHHHHHHHh---hCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCC
Q 024796 82 KKEIDWFYEGGAAAIYPDAWESFRD---LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR 158 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (262)
.... . .+........ .+...................++. ....+ ... +..
T Consensus 129 ~~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------~~~-------~~~ 181 (276)
T TIGR02240 129 VMVP------G----KPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPE----LAMAH------ASK-------VRS 181 (276)
T ss_pred ccCC------C----chhHHHHhcCchhhhccccccchhhhhccceeeccch----hhhhh------hhh-------ccc
Confidence 0000 0 0000000000 000000000000000000000000 00000 000 000
Q ss_pred CCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCC
Q 024796 159 GEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA 238 (262)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~ 238 (262)
.....+. .. .... . +......+.+| ++|||+|+|++|+++|...++++.+.+|+++++++++ ||++
T Consensus 182 ~~~~~~~---~~----~~~~---~--~~~~~~~l~~i-~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~ 247 (276)
T TIGR02240 182 GGKLGYY---WQ----LFAG---L--GWTSIHWLHKI-QQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLF 247 (276)
T ss_pred CCCchHH---HH----HHHH---c--CCchhhHhhcC-CCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCch
Confidence 0000000 00 0000 0 11112346788 5999999999999999998899999999999999985 9999
Q ss_pred CchhHHHHHHHHHHHHHHHHh
Q 024796 239 NEPGIAAELVATNEKLKNLIK 259 (262)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~ 259 (262)
+.+ .++++.+++.+|.+...
T Consensus 248 ~~e-~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 248 LIT-RAEAVAPIIMKFLAEER 267 (276)
T ss_pred hhc-cHHHHHHHHHHHHHHhh
Confidence 865 57888888888876543
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=2.9e-26 Score=195.93 Aligned_cols=222 Identities=19% Similarity=0.206 Sum_probs=127.2
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
+.+|+++|+||||+|+++.....++..++++|+.++++++++++++|+||||||.+|+.+|.++|++|++||++++....
T Consensus 73 gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 152 (302)
T PRK00870 73 GHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPT 152 (302)
T ss_pred CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCC
Confidence 36899999999999986532234677789999999999999999999999999999999999999999999999864211
Q ss_pred hhh--hhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCCC
Q 024796 82 KKE--IDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG 159 (262)
Q Consensus 82 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (262)
... ...+. .+..+....+.. .+.............. +....+ ... ... +.....
T Consensus 153 ~~~~~~~~~~----------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~------~~~-~~~-~~~~~~ 208 (302)
T PRK00870 153 GDGPMPDAFW----------AWRAFSQYSPVL----PVGRLVNGGTVRDLSD--AVRAAY------DAP-FPD-ESYKAG 208 (302)
T ss_pred ccccchHHHh----------hhhcccccCchh----hHHHHhhccccccCCH--HHHHHh------hcc-cCC-hhhhcc
Confidence 000 00000 000000000000 0000000000000000 000000 000 000 000000
Q ss_pred CchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCe---EEEeCCCCC
Q 024796 160 EDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEAD---FKVVADAGH 236 (262)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~---~~~i~~aGH 236 (262)
...+..+... .............+..+.++ ++||++|+|++|+++|... +++++.+|+++ +++++++||
T Consensus 209 -----~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH 280 (302)
T PRK00870 209 -----ARAFPLLVPT-SPDDPAVAANRAAWAVLERW-DKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGH 280 (302)
T ss_pred -----hhhhhhcCCC-CCCCcchHHHHHHHHhhhcC-CCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCc
Confidence 0000000000 00000000011123456788 5999999999999999866 88999999886 899999999
Q ss_pred CCCchhHHHHHHHHHHHHHH
Q 024796 237 SANEPGIAAELVATNEKLKN 256 (262)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~ 256 (262)
+++.+ .++++.+.+.+|..
T Consensus 281 ~~~~e-~p~~~~~~l~~fl~ 299 (302)
T PRK00870 281 FLQED-SGEELAEAVLEFIR 299 (302)
T ss_pred cchhh-ChHHHHHHHHHHHh
Confidence 99855 46777777777754
No 8
>PRK06489 hypothetical protein; Provisional
Probab=99.95 E-value=5.2e-26 Score=198.95 Aligned_cols=227 Identities=13% Similarity=0.062 Sum_probs=128.4
Q ss_pred eeEEeecCCCCCCCCCCCCC-----CCCChHHHHHHHHHH-HHHhCCCceE-EEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 3 VQEEALHQRGAGKSTPHACL-----DQNTTWDLIDDIEKL-RQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~-----~~~~~~~~~~dl~~l-~~~l~i~~~~-l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
.+||++|+||||+|+.+... ..++..++++|+.++ ++++++++++ |+||||||+||+.+|++||++|++||++
T Consensus 106 ~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi 185 (360)
T PRK06489 106 YFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPM 185 (360)
T ss_pred CEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeee
Confidence 68999999999999754321 135666789998774 5999999986 8999999999999999999999999999
Q ss_pred ccccchhhhhhHHHhccccccCHHHHHHHHh----hCC-hh-hhhHHHHHHHHHhCCCCHHH------HHHHHHHHHHHH
Q 024796 76 GIFLLRKKEIDWFYEGGAAAIYPDAWESFRD----LIP-EN-ERSCFVDAYSKRLNSDDKET------QYAAARAWTKWE 143 (262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 143 (262)
++.+.......+..+.. ....+..... ... .. ........+ ..+....... .......+...
T Consensus 186 ~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~- 259 (360)
T PRK06489 186 ASQPTEMSGRNWMWRRM----LIESIRNDPAWNNGNYTTQPPSLKRANPMF-AIATSGGTLAYQAQAPTRAAADKLVDE- 259 (360)
T ss_pred ccCcccccHHHHHHHHH----HHHHHHhCCCCCCCCCCCCHHHHHHHHHHH-HHHHhCCHHHHHHhcCChHHHHHHHHH-
Confidence 87532110000000000 0000000000 000 00 000000000 0000000000 00000000000
Q ss_pred HhhhcCCCCccccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhH--HHHHh
Q 024796 144 MMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSA--WDLHK 221 (262)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~--~~~~~ 221 (262)
.... ........+...+. . .. ..+....+.+| ++|||||+|++|.++|.+.+ +++++
T Consensus 260 -~~~~-------~~~~~~~~~~~~~~-------~----~~-~~d~~~~L~~I-~~PvLvI~G~~D~~~p~~~~~~~~la~ 318 (360)
T PRK06489 260 -RLAA-------PVTADANDFLYQWD-------S----SR-DYNPSPDLEKI-KAPVLAINSADDERNPPETGVMEAALK 318 (360)
T ss_pred -HHHh-------hhhcCHHHHHHHHH-------H----hh-ccChHHHHHhC-CCCEEEEecCCCcccChhhHHHHHHHH
Confidence 0000 00000001100000 0 00 12234567888 59999999999999988765 78999
Q ss_pred hCCCCeEEEeCCC----CCCCCchhHHHHHHHHHHHHHHHH
Q 024796 222 AWPEADFKVVADA----GHSANEPGIAAELVATNEKLKNLI 258 (262)
Q Consensus 222 ~~p~~~~~~i~~a----GH~~~~~~~~~~~~~~~~~~~~~~ 258 (262)
.+|++++++||+| ||+++ + .++++.+.+.+|.+-+
T Consensus 319 ~ip~a~l~~i~~a~~~~GH~~~-e-~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 319 RVKHGRLVLIPASPETRGHGTT-G-SAKFWKAYLAEFLAQV 357 (360)
T ss_pred hCcCCeEEEECCCCCCCCcccc-c-CHHHHHHHHHHHHHhc
Confidence 9999999999996 99997 3 6888999999987643
No 9
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=8.9e-26 Score=192.18 Aligned_cols=74 Identities=23% Similarity=0.337 Sum_probs=67.7
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
.+||++|+||||.|+.+.. .++...+++|+..+++++++++++|+||||||.+|+.+|.+||++|++||++++.
T Consensus 54 ~~via~D~~G~G~S~~~~~--~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 54 GRCLAPDLIGMGASDKPDI--DYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred CEEEEEcCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 4899999999999986542 4677789999999999999999999999999999999999999999999999873
No 10
>PRK07581 hypothetical protein; Validated
Probab=99.94 E-value=1.4e-25 Score=194.75 Aligned_cols=239 Identities=13% Similarity=0.063 Sum_probs=125.9
Q ss_pred ceeEEeecCCCCCCCCCCCCC-CCCC-----hHHHHHHHHH----HHHHhCCCc-eEEEEeChhHHHHHHHHHhCccchh
Q 024796 2 EVQEEALHQRGAGKSTPHACL-DQNT-----TWDLIDDIEK----LRQHLEIPE-WQVFGGSWGSTLALAYSLAHPDKVT 70 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~-~~~~-----~~~~~~dl~~----l~~~l~i~~-~~l~GhS~GG~va~~~a~~~p~rv~ 70 (262)
..+||++|+||||+|+.+... ..++ ..++++|+.+ ++++||+++ ++|+||||||+||+.+|.+||++|+
T Consensus 71 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~ 150 (339)
T PRK07581 71 KYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVE 150 (339)
T ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHh
Confidence 469999999999999754321 1122 2236777765 889999999 5899999999999999999999999
Q ss_pred eeeEeccccchhhhhhHHH--------h-----ccccccCHH-HHHHHHhhCChhhhhHHHHHHHHH--hCCCCHHHHHH
Q 024796 71 GLVLRGIFLLRKKEIDWFY--------E-----GGAAAIYPD-AWESFRDLIPENERSCFVDAYSKR--LNSDDKETQYA 134 (262)
Q Consensus 71 ~lVl~~~~~~~~~~~~~~~--------~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 134 (262)
+||++++..........+. . .+.....+. .+........ ...+...+... ...........
T Consensus 151 ~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 227 (339)
T PRK07581 151 RAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYA---GWGFSQAFYRQELWRAMGYASLED 227 (339)
T ss_pred hheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHH---HHHhHHHHHHhhhccccChhhHHH
Confidence 9999976542110000000 0 000000000 0000000000 00000000000 00000000000
Q ss_pred HHHHHHHHHHhhhcCCCCccccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCCh
Q 024796 135 AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMM 214 (262)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~ 214 (262)
.... .+..... ..+++ .+...+......... .. .....++...+.+| ++|||+|+|++|..+|..
T Consensus 228 ~~~~--~~~~~~~--~~~~~--------~~~~~l~~~~~~~~~-~~-~~~~~d~~~~L~~I-~~PtLvI~G~~D~~~p~~ 292 (339)
T PRK07581 228 FLVG--FWEGNFL--PRDPN--------NLLAMLWTWQRGDIS-RN-PAYGGDLAAALGSI-TAKTFVMPISTDLYFPPE 292 (339)
T ss_pred HHHH--HHHHhhc--ccCcc--------cHHHHHHHhhhcccc-cC-cccCCCHHHHHhcC-CCCEEEEEeCCCCCCCHH
Confidence 0000 0000000 00000 011110000000000 00 00001345567888 599999999999999998
Q ss_pred hHHHHHhhCCCCeEEEeCC-CCCCCCchhHHHHHHHHHHHHHHHHh
Q 024796 215 SAWDLHKAWPEADFKVVAD-AGHSANEPGIAAELVATNEKLKNLIK 259 (262)
Q Consensus 215 ~~~~~~~~~p~~~~~~i~~-aGH~~~~~~~~~~~~~~~~~~~~~~~ 259 (262)
.++.+++.+|+++++++++ +||+++.+ .+.++.+.+.+|..-+.
T Consensus 293 ~~~~l~~~ip~a~l~~i~~~~GH~~~~~-~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 293 DCEAEAALIPNAELRPIESIWGHLAGFG-QNPADIAFIDAALKELL 337 (339)
T ss_pred HHHHHHHhCCCCeEEEeCCCCCcccccc-CcHHHHHHHHHHHHHHH
Confidence 8899999999999999999 99998754 35666677777665443
No 11
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.94 E-value=2.2e-25 Score=199.06 Aligned_cols=236 Identities=18% Similarity=0.211 Sum_probs=128.5
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHH-HHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIE-KLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 80 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~-~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~ 80 (262)
+.+||++|+||||+|+.+.. ..++..++++|+. .+++++++++++|+||||||++++.+|.+||++|++|||+++...
T Consensus 232 ~yrVia~Dl~G~G~S~~p~~-~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 232 TYRLFAVDLLGFGRSPKPAD-SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred CCEEEEECCCCCCCCcCCCC-CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 46899999999999986532 2467777899994 899999999999999999999999999999999999999986431
Q ss_pred hhh----hhhHHHhc-cccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 024796 81 RKK----EIDWFYEG-GAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEEN 155 (262)
Q Consensus 81 ~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (262)
... ......+. .....++. .........+..................|................
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 379 (481)
T PLN03087 311 PVPKGVQATQYVMRKVAPRRVWPP-----------IAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFL 379 (481)
T ss_pred ccccchhHHHHHHHHhcccccCCc-----------cccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHH
Confidence 100 00000000 00000000 000000000000000000000000000000000000000000000
Q ss_pred c---CCCC-chHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEe
Q 024796 156 I---KRGE-DDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVV 231 (262)
Q Consensus 156 ~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i 231 (262)
. .... ...+ ..+..+ ..... ...+..+...+.+| ++|||+|||++|.++|.+.++.+++.+|+++++++
T Consensus 380 ~~~~~~~~~~~~~-~~l~~~----i~~~~-~~l~~~l~~l~~~I-~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI 452 (481)
T PLN03087 380 IEGFFCHTHNAAW-HTLHNI----ICGSG-SKLDGYLDHVRDQL-KCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVI 452 (481)
T ss_pred HHHHHhccchhhH-HHHHHH----Hhchh-hhhhhHHHHHHHhC-CCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEe
Confidence 0 0000 0000 000000 00000 00011112233467 59999999999999999999999999999999999
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHH
Q 024796 232 ADAGHSANEPGIAAELVATNEKLKN 256 (262)
Q Consensus 232 ~~aGH~~~~~~~~~~~~~~~~~~~~ 256 (262)
|++||+++..+.++++.+.+.+|-+
T Consensus 453 ~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 453 DDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred CCCCCcchhhcCHHHHHHHHHHHhh
Confidence 9999998743456777788877764
No 12
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=5.1e-25 Score=192.59 Aligned_cols=226 Identities=15% Similarity=0.072 Sum_probs=130.1
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHH-hCccchheeeEeccccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL-AHPDKVTGLVLRGIFLL 80 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~-~~p~rv~~lVl~~~~~~ 80 (262)
..+||++|+||||+|+++.. ..++...+++|+.++++++++++++|+||||||.+++.++. .+|++|++|||+++...
T Consensus 114 ~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~ 192 (360)
T PLN02679 114 NYTVYAIDLLGFGASDKPPG-FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGG 192 (360)
T ss_pred CCEEEEECCCCCCCCCCCCC-ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccc
Confidence 36899999999999986532 24667789999999999999999999999999999999987 47999999999986432
Q ss_pred hh-hh--hhHHHhc--cccccC------HHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcC
Q 024796 81 RK-KE--IDWFYEG--GAAAIY------PDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHL 149 (262)
Q Consensus 81 ~~-~~--~~~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (262)
.. .. ..+.... ....++ +.....+..... ....+..+......+......+....+ ...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~- 262 (360)
T PLN02679 193 MNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVK---QRDNLKNILLSVYGNKEAVDDELVEII------RGP- 262 (360)
T ss_pred cccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhc---CHHHHHHHHHHhccCcccCCHHHHHHH------Hhh-
Confidence 10 00 0010000 000000 000000001000 011111111111111000000000000 000
Q ss_pred CCCccccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChh-----HHHHHhhCC
Q 024796 150 LPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS-----AWDLHKAWP 224 (262)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~-----~~~~~~~~p 224 (262)
...+. ..+ .+.. ... +.. ..+....+.+| ++|||||+|++|.++|... ...+.+.+|
T Consensus 263 ~~~~~-----~~~----~~~~----~~~--~~~--~~~~~~~l~~i-~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip 324 (360)
T PLN02679 263 ADDEG-----ALD----AFVS----IVT--GPP--GPNPIKLIPRI-SLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLP 324 (360)
T ss_pred ccCCC-----hHH----HHHH----HHh--cCC--CCCHHHHhhhc-CCCEEEEEeCCCCCcCchhhHHHHHHhhhccCC
Confidence 00000 001 1110 000 000 11223456788 5999999999999988753 245677789
Q ss_pred CCeEEEeCCCCCCCCchhHHHHHHHHHHHHHHH
Q 024796 225 EADFKVVADAGHSANEPGIAAELVATNEKLKNL 257 (262)
Q Consensus 225 ~~~~~~i~~aGH~~~~~~~~~~~~~~~~~~~~~ 257 (262)
++++++||++||+++++ .++++.+.+.+|.+-
T Consensus 325 ~~~l~~i~~aGH~~~~E-~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 325 NVTLYVLEGVGHCPHDD-RPDLVHEKLLPWLAQ 356 (360)
T ss_pred ceEEEEcCCCCCCcccc-CHHHHHHHHHHHHHh
Confidence 99999999999999876 488888888888764
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.93 E-value=5.9e-25 Score=182.83 Aligned_cols=212 Identities=17% Similarity=0.149 Sum_probs=127.0
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
+.+||++|+||||.|..+. .++..++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++.+..
T Consensus 42 ~~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~ 118 (255)
T PRK10673 42 DHDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVD 118 (255)
T ss_pred CCeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCC
Confidence 4689999999999998643 4677789999999999999999999999999999999999999999999998753321
Q ss_pred hhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCCCCc
Q 024796 82 KKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGED 161 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (262)
.. ..+ .. .. ...+......... ........+...+ .. .. . .... ... ...... ....
T Consensus 119 ~~-~~~-~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~-~~-~-------~~~~--~~~-~~~~~~--~~~~ 175 (255)
T PRK10673 119 YH-VRR-HD----EI-FAAINAVSEAGAT-TRQQAAAIMRQHL-NE-EG-V-------IQFL--LKS-FVDGEW--RFNV 175 (255)
T ss_pred cc-chh-hH----HH-HHHHHHhhhcccc-cHHHHHHHHHHhc-CC-HH-H-------HHHH--Hhc-CCccee--EeeH
Confidence 00 000 00 00 0000000000000 0000000000000 00 00 0 0000 000 000000 0000
Q ss_pred hHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCCch
Q 024796 162 DIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP 241 (262)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~~~ 241 (262)
. .+... + .. ...++.+..+ ++|+|+|+|++|..++.+..+.+++.+|++++++++++||+++.+
T Consensus 176 ~----~~~~~---~-~~-------~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 239 (255)
T PRK10673 176 P----VLWDQ---Y-PH-------IVGWEKIPAW-PHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAE 239 (255)
T ss_pred H----HHHHh---H-HH-------HhCCcccCCC-CCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeecc
Confidence 0 00000 0 00 0012235566 599999999999998888888899999999999999999999765
Q ss_pred hHHHHHHHHHHHHHH
Q 024796 242 GIAAELVATNEKLKN 256 (262)
Q Consensus 242 ~~~~~~~~~~~~~~~ 256 (262)
.++++++.+.+|.+
T Consensus 240 -~p~~~~~~l~~fl~ 253 (255)
T PRK10673 240 -KPDAVLRAIRRYLN 253 (255)
T ss_pred -CHHHHHHHHHHHHh
Confidence 37788888888754
No 14
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.93 E-value=1.3e-25 Score=186.41 Aligned_cols=77 Identities=29% Similarity=0.409 Sum_probs=72.0
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEecccc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
.+|||+|+||+|.|+.|.....|+...++.|+..++++||.++++++||+||++||+.+|+.||+||+++|+++...
T Consensus 72 ~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~ 148 (322)
T KOG4178|consen 72 YRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPF 148 (322)
T ss_pred eEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCC
Confidence 68999999999999988776788988899999999999999999999999999999999999999999999987643
No 15
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=9.9e-25 Score=185.10 Aligned_cols=76 Identities=21% Similarity=0.354 Sum_probs=67.5
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
+.+||++|+||||.|+.+... .++..++++++.++++++++++++++||||||.|++.+|..+|++|+++|++++.
T Consensus 60 ~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 60 RFRCVAPDYLGFGLSERPSGF-GYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred CcEEEEECCCCCCCCCCCCcc-ccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 468999999999999865421 3566789999999999999999999999999999999999999999999998764
No 16
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.93 E-value=1.8e-24 Score=174.84 Aligned_cols=202 Identities=20% Similarity=0.236 Sum_probs=123.4
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
+.+|+++|+||||.|+.+.....++..++++|+.+++++++.++++|+||||||.+++.++.++|++|+++|++++....
T Consensus 24 ~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 24 GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPL 103 (228)
T ss_dssp TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSH
T ss_pred CCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccccccccccccccccccccccccccccccceeecccccc
Confidence 57899999999999986542224566679999999999999999999999999999999999999999999999886532
Q ss_pred hhhhh-HHHhccccccCHHHHHHHHhhCChhhhhHHH-HHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCCC
Q 024796 82 KKEID-WFYEGGAAAIYPDAWESFRDLIPENERSCFV-DAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG 159 (262)
Q Consensus 82 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (262)
..... ... +..+......... ....+. ..+....... ....+ +..
T Consensus 104 ~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~----------------~~~- 150 (228)
T PF12697_consen 104 PDSPSRSFG--------PSFIRRLLAWRSR-SLRRLASRFFYRWFDGD-------EPEDL----------------IRS- 150 (228)
T ss_dssp HHHHCHHHH--------HHHHHHHHHHHHH-HHHHHHHHHHHHHHTHH-------HHHHH----------------HHH-
T ss_pred ccccccccc--------chhhhhhhhcccc-ccccccccccccccccc-------ccccc----------------ccc-
Confidence 11000 000 0000000000000 000000 0000000000 00000 000
Q ss_pred CchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCC
Q 024796 160 EDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 239 (262)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~ 239 (262)
....+...+.. . ....+....+.++ ++|+++++|++|.+++....+.+.+.+|+++++++|++||+++
T Consensus 151 ~~~~~~~~~~~----~-------~~~~~~~~~~~~~-~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 218 (228)
T PF12697_consen 151 SRRALAEYLRS----N-------LWQADLSEALPRI-KVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLF 218 (228)
T ss_dssp HHHHHHHHHHH----H-------HHHHHHHHHHHGS-SSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHH
T ss_pred ccccccccccc----c-------ccccccccccccc-CCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccH
Confidence 00000000000 0 0012233456777 5999999999999999888888988899999999999999987
Q ss_pred chhHHHHHHH
Q 024796 240 EPGIAAELVA 249 (262)
Q Consensus 240 ~~~~~~~~~~ 249 (262)
.+ .+++++|
T Consensus 219 ~~-~p~~~~~ 227 (228)
T PF12697_consen 219 LE-QPDEVAE 227 (228)
T ss_dssp HH-SHHHHHH
T ss_pred HH-CHHHHhc
Confidence 44 3555544
No 17
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=2.9e-24 Score=186.73 Aligned_cols=74 Identities=27% Similarity=0.262 Sum_probs=65.4
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCce-EEEEeChhHHHHHHHHHhCccchheeeEecccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEW-QVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~-~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
..+||++|+||||.|... .++..++++|+.+++++|++++. +|+||||||+||+.+|.+||++|++|||+++..
T Consensus 99 ~~~Vi~~Dl~G~g~s~~~----~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 99 RFRLLAFDFIGADGSLDV----PIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred ccEEEEEeCCCCCCCCCC----CCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 468999999999988532 35667899999999999999875 799999999999999999999999999998754
No 18
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.92 E-value=1.4e-24 Score=177.02 Aligned_cols=221 Identities=24% Similarity=0.280 Sum_probs=127.0
Q ss_pred eEEeecCCCCCCCCC--CCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 4 QEEALHQRGAGKSTP--HACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 4 ~~~~~D~rG~G~S~~--~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
+||++|+||+|.|++ ......++..++++++..+++++|+++++++||||||.+++.||.+||++|+++|++++....
T Consensus 2 ~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~~ 81 (230)
T PF00561_consen 2 DVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPDL 81 (230)
T ss_dssp EEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSHH
T ss_pred EEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeeccc
Confidence 799999999999985 133456777889999999999999999999999999999999999999999999999884100
Q ss_pred hhhhhHH-Hhc-cccccCHHHHHH-HHhhCChhhhhHHHHHHHHHhCCCCHH--HHHHHHHHHHHHHHhhhcCCCCcccc
Q 024796 82 KKEIDWF-YEG-GAAAIYPDAWES-FRDLIPENERSCFVDAYSKRLNSDDKE--TQYAAARAWTKWEMMTAHLLPNEENI 156 (262)
Q Consensus 82 ~~~~~~~-~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (262)
.....+. ... .......+.... ..... ................. ........+..+ ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------- 144 (230)
T PF00561_consen 82 PDGLWNRIWPRGNLQGQLLDNFFNFLSDPI-----KPLLGRWPKQFFAYDREFVEDFLKQFQSQQY---AR--------- 144 (230)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH---HH---------
T ss_pred hhhhhHHHHhhhhhhhhHHHhhhccccccc-----hhhhhhhhhheeeccCccccchhhccchhhh---hH---------
Confidence 0000000 000 000000000000 00000 00000000000000000 000000000000 00
Q ss_pred CCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCC
Q 024796 157 KRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 236 (262)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH 236 (262)
..........+. ....++. ..+....+.++ ++|+|+++|++|.++|......+.+.+|++++++++++||
T Consensus 145 -~~~~~~~~~~~~-~~~~~~~-------~~~~~~~l~~i-~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH 214 (230)
T PF00561_consen 145 -FAETDAFDNMFW-NALGYFS-------VWDPSPALSNI-KVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGH 214 (230)
T ss_dssp -TCHHHHHHHHHH-HHHHHHH-------HHHHHHHHTTT-TSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCS
T ss_pred -HHHHHHHhhhcc-ccccccc-------ccccccccccc-CCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCCh
Confidence 000000000000 0000000 12334466778 5999999999999999998888999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHh
Q 024796 237 SANEPGIAAELVATNEKLKNLIK 259 (262)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~ 259 (262)
+.+ ++.++.|.++|+
T Consensus 215 ~~~--------~~~~~~~~~~i~ 229 (230)
T PF00561_consen 215 FAF--------LEGPDEFNEIII 229 (230)
T ss_dssp THH--------HHSHHHHHHHHH
T ss_pred HHH--------hcCHHhhhhhhc
Confidence 996 666666666664
No 19
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.92 E-value=8.9e-24 Score=174.47 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=65.8
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCcc-chheeeEecccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD-KVTGLVLRGIFL 79 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~-rv~~lVl~~~~~ 79 (262)
+.+||++|+||||+|+++. ..+...+++|+.++++++++++++++||||||.+|+.+|.++|+ +|++||++++.+
T Consensus 27 ~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 27 DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 4689999999999998653 23566799999999999999999999999999999999999976 499999987643
No 20
>PLN02578 hydrolase
Probab=99.92 E-value=6.8e-24 Score=185.20 Aligned_cols=231 Identities=14% Similarity=0.128 Sum_probs=130.2
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
..+|+++|+||||.|+++.. .++...+++|+.++++.++.++++++||||||.+|+.+|.++|++|+++||+++....
T Consensus 112 ~~~v~~~D~~G~G~S~~~~~--~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~ 189 (354)
T PLN02578 112 KYKVYALDLLGFGWSDKALI--EYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQF 189 (354)
T ss_pred CCEEEEECCCCCCCCCCccc--ccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccc
Confidence 36899999999999987532 4676678999999999999999999999999999999999999999999998764321
Q ss_pred hhhhhHHHhc-c-ccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCC-
Q 024796 82 KKEIDWFYEG-G-AAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR- 158 (262)
Q Consensus 82 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 158 (262)
.......... . ...+.... +...... ........+.... ..... ..+.. .. ....++..+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~-~~~~~-~~~~~---~~------~~~~~~~~~~~~ 254 (354)
T PLN02578 190 GSESREKEEAIVVEETVLTRF---VVKPLKE-WFQRVVLGFLFWQ-AKQPS-RIESV---LK------SVYKDKSNVDDY 254 (354)
T ss_pred cccccccccccccccchhhHH---HhHHHHH-HHHHHHHHHHHHH-hcCHH-HHHHH---HH------HhcCCcccCCHH
Confidence 1000000000 0 00000000 0000000 0000000000000 00000 00000 00 00000000000
Q ss_pred --------CCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEE
Q 024796 159 --------GEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKV 230 (262)
Q Consensus 159 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~ 230 (262)
.........+......+... .......+.+.++ ++|+|+|+|++|.++|...++.+++.+|++++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~i-~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~ 329 (354)
T PLN02578 255 LVESITEPAADPNAGEVYYRLMSRFLFN----QSRYTLDSLLSKL-SCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVN 329 (354)
T ss_pred HHHHHHhcccCCchHHHHHHHHHHHhcC----CCCCCHHHHhhcC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 00000000111110001100 0011223456788 5999999999999999988999999999999999
Q ss_pred eCCCCCCCCchhHHHHHHHHHHHHHH
Q 024796 231 VADAGHSANEPGIAAELVATNEKLKN 256 (262)
Q Consensus 231 i~~aGH~~~~~~~~~~~~~~~~~~~~ 256 (262)
+ ++||+++++ .++++.+++.+|.+
T Consensus 330 i-~~GH~~~~e-~p~~~~~~I~~fl~ 353 (354)
T PLN02578 330 L-QAGHCPHDE-VPEQVNKALLEWLS 353 (354)
T ss_pred e-CCCCCcccc-CHHHHHHHHHHHHh
Confidence 9 599999866 58888888888753
No 21
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.92 E-value=1.1e-23 Score=173.05 Aligned_cols=211 Identities=20% Similarity=0.206 Sum_probs=127.1
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
..+|+++|+||||.|+.+. ..++..++++|+.++++.++.++++++||||||++++.+|.++|++|+++|++++....
T Consensus 39 ~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 116 (251)
T TIGR02427 39 DFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKI 116 (251)
T ss_pred ccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcccc
Confidence 4689999999999997543 24577789999999999999999999999999999999999999999999998764321
Q ss_pred hhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHH-HHHHHHHHHHHHHhhhcCCCCccccCCCC
Q 024796 82 KKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKET-QYAAARAWTKWEMMTAHLLPNEENIKRGE 160 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (262)
.....+.. ....................+....... .......+..+. . ...
T Consensus 117 ~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~ 169 (251)
T TIGR02427 117 GTPESWNA--------------RIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNML--V-----------RQP 169 (251)
T ss_pred CchhhHHH--------------HHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHH--H-----------hcC
Confidence 10000000 0000000000000000000000000000 000000000000 0 000
Q ss_pred chHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCCc
Q 024796 161 DDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 240 (262)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~~ 240 (262)
...+..... . +. ..++...+.++ ++|+++++|++|.++|.+..+.+.+.+++.++++++++||+++.
T Consensus 170 ~~~~~~~~~-----~------~~-~~~~~~~~~~~-~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 236 (251)
T TIGR02427 170 PDGYAGCCA-----A------IR-DADFRDRLGAI-AVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCV 236 (251)
T ss_pred HHHHHHHHH-----H------Hh-cccHHHHhhhc-CCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccc
Confidence 000100000 0 00 11223456677 59999999999999999888888888999999999999999986
Q ss_pred hhHHHHHHHHHHHHH
Q 024796 241 PGIAAELVATNEKLK 255 (262)
Q Consensus 241 ~~~~~~~~~~~~~~~ 255 (262)
+ .++++.+.+.+|.
T Consensus 237 ~-~p~~~~~~i~~fl 250 (251)
T TIGR02427 237 E-QPEAFNAALRDFL 250 (251)
T ss_pred c-ChHHHHHHHHHHh
Confidence 5 3677777777774
No 22
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.92 E-value=2.4e-23 Score=172.17 Aligned_cols=216 Identities=17% Similarity=0.194 Sum_probs=127.9
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
..+||++|+||||.|+.+.. ..++..++++|+.++++++++.+++++||||||.+|+.+|.++|++|+++|++++....
T Consensus 39 ~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 39 RFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRP 117 (257)
T ss_pred ccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCC
Confidence 46899999999999975432 34677789999999999999999999999999999999999999999999998864321
Q ss_pred hhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCCC-C
Q 024796 82 KKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG-E 160 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 160 (262)
........ . ....+...... ................. . .......... . ..+... .
T Consensus 118 ~~~~~~~~--------~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~--~-------~~~~~~~~ 174 (257)
T TIGR03611 118 DPHTRRCF--------D-VRIALLQHAGP---EAYVHAQALFLYPADWI-S-ENAARLAADE--A-------HALAHFPG 174 (257)
T ss_pred ChhHHHHH--------H-HHHHHHhccCc---chhhhhhhhhhccccHh-h-ccchhhhhhh--h-------hcccccCc
Confidence 10000000 0 00000000000 00000000000000000 0 0000000000 0 000000 0
Q ss_pred chHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCCc
Q 024796 161 DDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 240 (262)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~~ 240 (262)
...+...+.. .. ..+....++++ ++|+|+++|++|.++|.+.++++.+.+|++++++++++||+++.
T Consensus 175 ~~~~~~~~~~-----~~-------~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 241 (257)
T TIGR03611 175 KANVLRRINA-----LE-------AFDVSARLDRI-QHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNV 241 (257)
T ss_pred cHHHHHHHHH-----HH-------cCCcHHHhccc-CccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccc
Confidence 0000000000 00 01123456778 59999999999999999988999999999999999999999875
Q ss_pred hhHHHHHHHHHHHHH
Q 024796 241 PGIAAELVATNEKLK 255 (262)
Q Consensus 241 ~~~~~~~~~~~~~~~ 255 (262)
+ .++++.+.+.+|.
T Consensus 242 ~-~~~~~~~~i~~fl 255 (257)
T TIGR03611 242 T-DPETFNRALLDFL 255 (257)
T ss_pred c-CHHHHHHHHHHHh
Confidence 4 4677777777774
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.91 E-value=2.7e-23 Score=174.56 Aligned_cols=216 Identities=18% Similarity=0.153 Sum_probs=127.9
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccchh
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 82 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~~ 82 (262)
.+|+++|+||||.|+.+.. ..++...+++|+.++++++++++++|+||||||.+++.+|.++|++++++|++++.....
T Consensus 55 ~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~ 133 (278)
T TIGR03056 55 FRVVAPDLPGHGFTRAPFR-FRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPF 133 (278)
T ss_pred cEEEeecCCCCCCCCCccc-cCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccc
Confidence 6899999999999976432 245677899999999999999999999999999999999999999999999987643211
Q ss_pred hh-h----hHHHhc-cccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 024796 83 KE-I----DWFYEG-GAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNS-DDKETQYAAARAWTKWEMMTAHLLPNEEN 155 (262)
Q Consensus 83 ~~-~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (262)
.. . +..... ......+..... . ... ......+...... ..... .. + +... ...+..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~---~~~~~~~~~~~~~~~~~~~-~~----~--~~~~----~~~~~~ 196 (278)
T TIGR03056 134 EGMAGTLFPYMARVLACNPFTPPMMSR-G--AAD---QQRVERLIRDTGSLLDKAG-MT----Y--YGRL----IRSPAH 196 (278)
T ss_pred ccccccccchhhHhhhhcccchHHHHh-h--ccc---CcchhHHhhccccccccch-hh----H--HHHh----hcCchh
Confidence 00 0 000000 000000000000 0 000 0001111100000 00000 00 0 0000 000000
Q ss_pred cCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCC
Q 024796 156 IKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAG 235 (262)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aG 235 (262)
. .. ... +..... .......++++ ++|+|+|+|++|..+|...++++.+.+|++++++++++|
T Consensus 197 ~-----~~---~~~-----~~~~~~----~~~~~~~~~~i-~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~g 258 (278)
T TIGR03056 197 V-----DG---ALS-----MMAQWD----LAPLNRDLPRI-TIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGG 258 (278)
T ss_pred h-----hH---HHH-----Hhhccc----ccchhhhcccC-CCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCC
Confidence 0 00 000 000000 01123356777 599999999999999988889999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 024796 236 HSANEPGIAAELVATNEKLK 255 (262)
Q Consensus 236 H~~~~~~~~~~~~~~~~~~~ 255 (262)
|+++.+ .++++.+.+.+|.
T Consensus 259 H~~~~e-~p~~~~~~i~~f~ 277 (278)
T TIGR03056 259 HLVHEE-QADGVVGLILQAA 277 (278)
T ss_pred Cccccc-CHHHHHHHHHHHh
Confidence 998755 3677777777774
No 24
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.91 E-value=1.5e-23 Score=182.86 Aligned_cols=78 Identities=24% Similarity=0.307 Sum_probs=65.9
Q ss_pred ceeEEeecCCC--CCCCCCCC----C------CCCCChHHHHHHHHHHHHHhCCCc-eEEEEeChhHHHHHHHHHhCccc
Q 024796 2 EVQEEALHQRG--AGKSTPHA----C------LDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALAYSLAHPDK 68 (262)
Q Consensus 2 ~~~~~~~D~rG--~G~S~~~~----~------~~~~~~~~~~~dl~~l~~~l~i~~-~~l~GhS~GG~va~~~a~~~p~r 68 (262)
..+||++|+|| ||.|.+.. + ...++..++++|+.+++++||+++ ++|+||||||++++.+|.+||++
T Consensus 72 ~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~ 151 (351)
T TIGR01392 72 RYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPER 151 (351)
T ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHh
Confidence 36899999999 56654311 1 113567789999999999999999 99999999999999999999999
Q ss_pred hheeeEecccc
Q 024796 69 VTGLVLRGIFL 79 (262)
Q Consensus 69 v~~lVl~~~~~ 79 (262)
|++||++++..
T Consensus 152 v~~lvl~~~~~ 162 (351)
T TIGR01392 152 VRAIVVLATSA 162 (351)
T ss_pred hheEEEEccCC
Confidence 99999998754
No 25
>PHA02857 monoglyceride lipase; Provisional
Probab=99.91 E-value=3.7e-23 Score=174.35 Aligned_cols=212 Identities=12% Similarity=0.096 Sum_probs=121.3
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCCceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l----~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
+.+|+++|+||||+|++... ...+...+++|+..+++.+ +..+++|+||||||.+|+.+|.++|++|+++||+++
T Consensus 52 g~~via~D~~G~G~S~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p 130 (276)
T PHA02857 52 GILVFSHDHIGHGRSNGEKM-MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSP 130 (276)
T ss_pred CCEEEEccCCCCCCCCCccC-CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecc
Confidence 36899999999999975321 1113334667776666553 446799999999999999999999999999999987
Q ss_pred ccchhhhhhHHHhccccccCHHHHHHHH-h-hCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 024796 78 FLLRKKEIDWFYEGGAAAIYPDAWESFR-D-LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEEN 155 (262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (262)
...... ..+ ........ . ..+... ...+.......+.... .. + . .++..
T Consensus 131 ~~~~~~-~~~----------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~---~---~----~~~~~ 181 (276)
T PHA02857 131 LVNAEA-VPR----------LNLLAAKLMGIFYPNKI----VGKLCPESVSRDMDEV----YK---Y---Q----YDPLV 181 (276)
T ss_pred cccccc-ccH----------HHHHHHHHHHHhCCCCc----cCCCCHhhccCCHHHH----HH---H---h----cCCCc
Confidence 532100 000 00000000 0 000000 0000000000000000 00 0 0 01110
Q ss_pred cCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhC-CCCeEEEeCCC
Q 024796 156 IKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADA 234 (262)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~a 234 (262)
........+....... ..+....+.++ ++|||+|+|++|.++|.+.++++.+.+ +++++++++++
T Consensus 182 ~~~~~~~~~~~~~~~~-------------~~~~~~~l~~i-~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~ 247 (276)
T PHA02857 182 NHEKIKAGFASQVLKA-------------TNKVRKIIPKI-KTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGA 247 (276)
T ss_pred cCCCccHHHHHHHHHH-------------HHHHHHhcccC-CCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCC
Confidence 0000011111000000 01223457788 599999999999999999998888876 57899999999
Q ss_pred CCCCCch--hHHHHHHHHHHHHHHH
Q 024796 235 GHSANEP--GIAAELVATNEKLKNL 257 (262)
Q Consensus 235 GH~~~~~--~~~~~~~~~~~~~~~~ 257 (262)
||.++.+ +..+++++...+|...
T Consensus 248 gH~~~~e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 248 KHHLHKETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred cccccCCchhHHHHHHHHHHHHHHH
Confidence 9999755 4467788888888654
No 26
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.91 E-value=8.1e-23 Score=167.40 Aligned_cols=213 Identities=20% Similarity=0.228 Sum_probs=118.1
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
..+|+++|+||||.|++.. .++..++++++.+++ .++++++||||||.+++.+|.++|++|+++|++++.+..
T Consensus 30 ~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 102 (245)
T TIGR01738 30 HFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA----PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCF 102 (245)
T ss_pred CeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCccc
Confidence 3689999999999997542 345556677665443 268999999999999999999999999999998775421
Q ss_pred hhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHH--HhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCCC
Q 024796 82 KKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSK--RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG 159 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (262)
.....| .. .+.+.....+....... .......+.. .+........ ...+.. ... . ...+
T Consensus 103 ~~~~~~--~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~-~-~~~~------ 163 (245)
T TIGR01738 103 SAREDW--PE---GIKPDVLTGFQQQLSDD-YQRTIERFLALQTLGTPTARQD---ARALKQ--TLL-A-RPTP------ 163 (245)
T ss_pred ccCCcc--cc---cCCHHHHHHHHHHhhhh-HHHHHHHHHHHHHhcCCccchH---HHHHHH--Hhh-c-cCCC------
Confidence 100000 00 00011111111000000 0000011000 0000000000 000000 000 0 0000
Q ss_pred CchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCC
Q 024796 160 EDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 239 (262)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~ 239 (262)
....+...+.. . . ..+....+.+| ++|+|+++|++|.++|.+..+.+.+.+|+++++++|++||+++
T Consensus 164 ~~~~~~~~~~~------~-----~-~~~~~~~l~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 230 (245)
T TIGR01738 164 NVQVLQAGLEI------L-----A-TVDLRQPLQNI-SVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPF 230 (245)
T ss_pred CHHHHHHHHHH------h-----h-cccHHHHHhcC-CCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCcc
Confidence 00001000000 0 0 11223456788 5999999999999999988888999999999999999999998
Q ss_pred chhHHHHHHHHHHHH
Q 024796 240 EPGIAAELVATNEKL 254 (262)
Q Consensus 240 ~~~~~~~~~~~~~~~ 254 (262)
.+ .++++.+.+.+|
T Consensus 231 ~e-~p~~~~~~i~~f 244 (245)
T TIGR01738 231 LS-HAEAFCALLVAF 244 (245)
T ss_pred cc-CHHHHHHHHHhh
Confidence 54 466666666665
No 27
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.91 E-value=2.8e-23 Score=181.04 Aligned_cols=216 Identities=16% Similarity=0.115 Sum_probs=121.9
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC------ceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP------EWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~------~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
+.+|+++|+||||+|+.+... ..+..++++|+.++++.++.+ +++|+||||||.||+.++.++|++|+++||+
T Consensus 115 g~~v~~~D~~G~G~S~~~~~~-~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi 193 (349)
T PLN02385 115 GYGVFAMDYPGFGLSEGLHGY-IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILV 193 (349)
T ss_pred CCEEEEecCCCCCCCCCCCCC-cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEe
Confidence 468999999999999864321 235567899999999888653 6999999999999999999999999999999
Q ss_pred ccccchhhhh--hHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCc
Q 024796 76 GIFLLRKKEI--DWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNE 153 (262)
Q Consensus 76 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (262)
++........ .+.. ...........+...... ...+......+ .. .. ....+ +.
T Consensus 194 ~p~~~~~~~~~~~~~~--------~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~-~~--~~---~~~~~---------~~ 249 (349)
T PLN02385 194 APMCKIADDVVPPPLV--------LQILILLANLLPKAKLVP-QKDLAELAFRD-LK--KR---KMAEY---------NV 249 (349)
T ss_pred cccccccccccCchHH--------HHHHHHHHHHCCCceecC-CCccccccccC-HH--HH---HHhhc---------Cc
Confidence 8753210000 0000 000000000000000000 00000000000 00 00 00000 00
Q ss_pred cccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhC--CCCeEEEe
Q 024796 154 ENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVV 231 (262)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i 231 (262)
..... ...+...+..+ +...++...+.++ ++|||||+|++|.++|...++.+.+.+ +++++++|
T Consensus 250 ~~~~~--~~~~~~~~~~l-----------~~~~~~~~~l~~i-~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i 315 (349)
T PLN02385 250 IAYKD--KPRLRTAVELL-----------RTTQEIEMQLEEV-SLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLY 315 (349)
T ss_pred ceeCC--CcchHHHHHHH-----------HHHHHHHHhcccC-CCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEe
Confidence 00000 00000000000 0001223456778 599999999999999999888888877 57899999
Q ss_pred CCCCCCCCch--hH-HHHHHHHHHHHHH
Q 024796 232 ADAGHSANEP--GI-AAELVATNEKLKN 256 (262)
Q Consensus 232 ~~aGH~~~~~--~~-~~~~~~~~~~~~~ 256 (262)
|++||+++.+ +. .+++++.+.+|.+
T Consensus 316 ~~~gH~l~~e~p~~~~~~v~~~i~~wL~ 343 (349)
T PLN02385 316 EDAYHSILEGEPDEMIFQVLDDIISWLD 343 (349)
T ss_pred CCCeeecccCCChhhHHHHHHHHHHHHH
Confidence 9999998732 22 3345566666654
No 28
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.91 E-value=1.3e-22 Score=170.22 Aligned_cols=230 Identities=16% Similarity=0.227 Sum_probs=126.4
Q ss_pred ceeEEeecCCCCCCCCCCCCCC-CCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLD-QNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 80 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~-~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~ 80 (262)
+.+||++|+||||.|+.+.... .++...+++|+.++++++++++++++||||||.+++.+|.++|++|+++|++++...
T Consensus 53 g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 53 GREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS 132 (288)
T ss_pred CCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc
Confidence 3789999999999997543211 256678999999999999999999999999999999999999999999999876532
Q ss_pred hhhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccC---
Q 024796 81 RKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIK--- 157 (262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 157 (262)
............ .. ++...... +............. .......+... ........+....
T Consensus 133 ~~~~~~~~~~~~-~~-~~~~~~~~------------~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 195 (288)
T TIGR01250 133 APEYVKELNRLR-KE-LPPEVRAA------------IKRCEASGDYDNPE-YQEAVEVFYHH--LLCRTRKWPEALKHLK 195 (288)
T ss_pred chHHHHHHHHHH-hh-cChhHHHH------------HHHHHhccCcchHH-HHHHHHHHHHH--hhcccccchHHHHHHh
Confidence 111000000000 00 00000000 00000000000000 00000000000 0000000000000
Q ss_pred -CCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCC
Q 024796 158 -RGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 236 (262)
Q Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH 236 (262)
......+...+.. ..+ ...+... ..+....+.++ ++|+|+++|++|.+ +....+.+++.++++++++++++||
T Consensus 196 ~~~~~~~~~~~~~~--~~~-~~~~~~~-~~~~~~~l~~i-~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH 269 (288)
T TIGR01250 196 SGMNTNVYNIMQGP--NEF-TITGNLK-DWDITDKLSEI-KVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSH 269 (288)
T ss_pred hccCHHHHhcccCC--ccc-ccccccc-ccCHHHHhhcc-CCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCC
Confidence 0000000000000 000 0000000 12234466788 59999999999986 4567788888899999999999999
Q ss_pred CCCchhHHHHHHHHHHHHH
Q 024796 237 SANEPGIAAELVATNEKLK 255 (262)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~ 255 (262)
+++.+ .++++.+.+.+|.
T Consensus 270 ~~~~e-~p~~~~~~i~~fl 287 (288)
T TIGR01250 270 MTMIE-DPEVYFKLLSDFI 287 (288)
T ss_pred CcccC-CHHHHHHHHHHHh
Confidence 99865 4777777777764
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.91 E-value=8.9e-23 Score=170.21 Aligned_cols=77 Identities=26% Similarity=0.437 Sum_probs=66.3
Q ss_pred eeEEeecCCCCCCCCCCC-CCCCCC-hHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEecccc
Q 024796 3 VQEEALHQRGAGKSTPHA-CLDQNT-TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~-~~~~~~-~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
-+|+++|++|+|+|++|. +.+... ...+++-|++.+...||++.+|+||||||++|..||++||+||++|||+++..
T Consensus 117 ~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~G 195 (365)
T KOG4409|consen 117 RNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWG 195 (365)
T ss_pred CceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccc
Confidence 479999999999999764 221112 22589999999999999999999999999999999999999999999998864
No 30
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=6.4e-23 Score=177.42 Aligned_cols=217 Identities=17% Similarity=0.154 Sum_probs=122.6
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC------CceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI------PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i------~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
+.+|+++|+||||+|++.... ..+...+++|+.++++.++. .+++|+||||||.+++.++.++|++|++||++
T Consensus 87 Gy~V~~~D~rGhG~S~~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~ 165 (330)
T PLN02298 87 GFACFALDLEGHGRSEGLRAY-VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLV 165 (330)
T ss_pred CCEEEEecCCCCCCCCCcccc-CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEe
Confidence 468999999999999754321 23555789999999998854 26899999999999999999999999999999
Q ss_pred ccccchhhhh--hHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCc
Q 024796 76 GIFLLRKKEI--DWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNE 153 (262)
Q Consensus 76 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (262)
++........ .+.... .......+ .+.. ..... ........ .......+.. .++
T Consensus 166 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~---~~~~----~~~~~-~~~~~~~~--~~~~~~~~~~---------~~~ 221 (330)
T PLN02298 166 APMCKISDKIRPPWPIPQ-----ILTFVARF---LPTL----AIVPT-ADLLEKSV--KVPAKKIIAK---------RNP 221 (330)
T ss_pred cccccCCcccCCchHHHH-----HHHHHHHH---CCCC----ccccC-CCcccccc--cCHHHHHHHH---------hCc
Confidence 8753211000 000000 00000000 0000 00000 00000000 0000000000 011
Q ss_pred cccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhC--CCCeEEEe
Q 024796 154 ENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVV 231 (262)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i 231 (262)
....... .+.. +..+ ... .....+.+.++ ++|+|||||++|.++|.+.++.+.+.+ ++++++++
T Consensus 222 ~~~~~~~--~~~~-~~~~----~~~------~~~~~~~l~~i-~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~ 287 (330)
T PLN02298 222 MRYNGKP--RLGT-VVEL----LRV------TDYLGKKLKDV-SIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIY 287 (330)
T ss_pred cccCCCc--cHHH-HHHH----HHH------HHHHHHhhhhc-CCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEc
Confidence 1110000 0000 0000 000 01123456778 599999999999999999888887776 47899999
Q ss_pred CCCCCCCC--chh-HHHHHHHHHHHHHHH
Q 024796 232 ADAGHSAN--EPG-IAAELVATNEKLKNL 257 (262)
Q Consensus 232 ~~aGH~~~--~~~-~~~~~~~~~~~~~~~ 257 (262)
+++||+++ +++ ..+++.+.+.+|...
T Consensus 288 ~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 288 DGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred CCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 99999985 333 345666777777543
No 31
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.90 E-value=2.2e-22 Score=176.20 Aligned_cols=77 Identities=22% Similarity=0.180 Sum_probs=68.6
Q ss_pred ceeEEeecCCCCCCCCCCCCC--CCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 2 EVQEEALHQRGAGKSTPHACL--DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~--~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
..+||++|+||||.|+++... ..++...+++|+.++++++++++++|+||||||.+++.+|.+||++|++|||+++.
T Consensus 153 ~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~ 231 (383)
T PLN03084 153 NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPP 231 (383)
T ss_pred CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCC
Confidence 368999999999999865321 14677789999999999999999999999999999999999999999999999875
No 32
>PRK10749 lysophospholipase L2; Provisional
Probab=99.90 E-value=9.2e-23 Score=176.45 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=64.9
Q ss_pred ceeEEeecCCCCCCCCCCCCC----CCCChHHHHHHHHHHHHHh----CCCceEEEEeChhHHHHHHHHHhCccchheee
Q 024796 2 EVQEEALHQRGAGKSTPHACL----DQNTTWDLIDDIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV 73 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~----~~~~~~~~~~dl~~l~~~l----~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lV 73 (262)
+.+|+++|+||||.|+++.+. ..++..++++|+..+++++ +..+++++||||||.+++.||.++|++|+++|
T Consensus 81 g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lv 160 (330)
T PRK10749 81 GYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIA 160 (330)
T ss_pred CCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEE
Confidence 468999999999999754211 1135567999999999887 67799999999999999999999999999999
Q ss_pred Eeccc
Q 024796 74 LRGIF 78 (262)
Q Consensus 74 l~~~~ 78 (262)
++++.
T Consensus 161 l~~p~ 165 (330)
T PRK10749 161 LCAPM 165 (330)
T ss_pred EECch
Confidence 99875
No 33
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.90 E-value=1.3e-22 Score=178.55 Aligned_cols=78 Identities=23% Similarity=0.234 Sum_probs=64.7
Q ss_pred ceeEEeecCCCC-CCCCCCCC------------CCCCChHHHHHHHHHHHHHhCCCc-eEEEEeChhHHHHHHHHHhCcc
Q 024796 2 EVQEEALHQRGA-GKSTPHAC------------LDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALAYSLAHPD 67 (262)
Q Consensus 2 ~~~~~~~D~rG~-G~S~~~~~------------~~~~~~~~~~~dl~~l~~~l~i~~-~~l~GhS~GG~va~~~a~~~p~ 67 (262)
..+||++|+||+ |.|+.+.+ ...++..++++|+.+++++|++++ ++|+||||||++++.+|.+||+
T Consensus 91 ~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 170 (379)
T PRK00175 91 RYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPD 170 (379)
T ss_pred ceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChH
Confidence 468999999993 55543211 014567789999999999999999 4899999999999999999999
Q ss_pred chheeeEecccc
Q 024796 68 KVTGLVLRGIFL 79 (262)
Q Consensus 68 rv~~lVl~~~~~ 79 (262)
+|++||++++..
T Consensus 171 ~v~~lvl~~~~~ 182 (379)
T PRK00175 171 RVRSALVIASSA 182 (379)
T ss_pred hhhEEEEECCCc
Confidence 999999998754
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=1.2e-21 Score=173.38 Aligned_cols=76 Identities=29% Similarity=0.403 Sum_probs=63.5
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCCh---H-HHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTT---W-DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~---~-~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
.+|+++|+||||+|+++.. ...+. . .+++++.++++.+++++++|+||||||.+|+.||.++|++|++|||+++.
T Consensus 132 ~~vi~~D~rG~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 132 FRVIAIDQLGWGGSSRPDF-TCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred CEEEEECCCCCCCCCCCCc-ccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 6899999999999986431 11111 1 36788899999999999999999999999999999999999999999874
Q ss_pred c
Q 024796 79 L 79 (262)
Q Consensus 79 ~ 79 (262)
.
T Consensus 211 ~ 211 (402)
T PLN02894 211 G 211 (402)
T ss_pred c
Confidence 3
No 35
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.89 E-value=3.2e-22 Score=171.59 Aligned_cols=229 Identities=20% Similarity=0.189 Sum_probs=128.9
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEe---cccc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR---GIFL 79 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~---~~~~ 79 (262)
..|.++|++|||.|+..+....|+..+.++-+..+....+-++++|+||||||++|+.+|..||+.|++||++ ++..
T Consensus 87 ~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~ 166 (326)
T KOG1454|consen 87 LRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPV 166 (326)
T ss_pred eEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeeccccccc
Confidence 6799999999996654332234677778888999999988889999999999999999999999999999944 3321
Q ss_pred chhhhhhHHHhccccccCHHHHHHHHh-hCChhhhh-HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccC
Q 024796 80 LRKKEIDWFYEGGAAAIYPDAWESFRD-LIPENERS-CFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIK 157 (262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (262)
...... ......... .....+.. .........+.... . +.. ......++....
T Consensus 167 ~~~~~~------------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~---------~~~-~~~~~~~~~~~~ 221 (326)
T KOG1454|consen 167 YSTPKG------------IKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG---L---------LRC-LKVVYTDPSRLL 221 (326)
T ss_pred ccCCcc------------hhHHHHhhhhhccHhhhcCccccccchhheeHh---h---------hcc-eeeeccccccch
Confidence 100000 000000000 00000000 00000000000000 0 000 000000000000
Q ss_pred CCCchHHH----HHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCC
Q 024796 158 RGEDDIFS----LAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVAD 233 (262)
Q Consensus 158 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~ 233 (262)
........ ..+.+....-+.+.. ...+......+.++.++|+||+||++|++.|.+.++.+++.+|+++++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~ 300 (326)
T KOG1454|consen 222 EKLLHLLSRPVKEHFHRDARLSLFLEL-LGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPG 300 (326)
T ss_pred hhhhhheecccccchhhhheeeEEEec-cCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCC
Confidence 00000000 000000000000000 0001222335667745999999999999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHH
Q 024796 234 AGHSANEPGIAAELVATNEKLKNLI 258 (262)
Q Consensus 234 aGH~~~~~~~~~~~~~~~~~~~~~~ 258 (262)
|||.+|+ ++++++++.+..|....
T Consensus 301 ~gH~~h~-e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 301 AGHLPHL-ERPEEVAALLRSFIARL 324 (326)
T ss_pred CCccccc-CCHHHHHHHHHHHHHHh
Confidence 9999998 57889999998887653
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.88 E-value=1.6e-21 Score=159.74 Aligned_cols=218 Identities=18% Similarity=0.197 Sum_probs=123.9
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHH-HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDD-IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 80 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~d-l~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~ 80 (262)
..+|+++|+||||.|+.+.....++..++++| +..+++.++.++++++||||||.+++.+|.++|++|+++|++++.+.
T Consensus 27 ~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 27 HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPG 106 (251)
T ss_pred cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCC
Confidence 46899999999999976432234455678989 88899999999999999999999999999999999999999886542
Q ss_pred hhhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHH--hCC---CCHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 024796 81 RKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR--LNS---DDKETQYAAARAWTKWEMMTAHLLPNEEN 155 (262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (262)
......+...... ...+....... ....+...+... +.. ...... ..+. .......+
T Consensus 107 ~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~-- 168 (251)
T TIGR03695 107 LATEEERAARRQN----DEQLAQRFEQE---GLEAFLDDWYQQPLFASQKNLPPEQR----QALR-----AKRLANNP-- 168 (251)
T ss_pred cCchHhhhhhhhc----chhhhhHHHhc---CccHHHHHHhcCceeeecccCChHHh----HHHH-----Hhcccccc--
Confidence 1111000000000 00000000000 000111111100 000 000000 0000 00000000
Q ss_pred cCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCC
Q 024796 156 IKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAG 235 (262)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aG 235 (262)
......+.. . . . ....+....+.++ ++|+++++|++|...+ ...+.+.+.+++++++++|++|
T Consensus 169 ------~~~~~~~~~----~-~---~-~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~g 231 (251)
T TIGR03695 169 ------EGLAKMLRA----T-G---L-GKQPSLWPKLQAL-TIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAG 231 (251)
T ss_pred ------hHHHHHHHH----h-h---h-hcccchHHHhhCC-CCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCC
Confidence 000001000 0 0 0 0011223456677 5999999999998654 4567788888999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 024796 236 HSANEPGIAAELVATNEKLK 255 (262)
Q Consensus 236 H~~~~~~~~~~~~~~~~~~~ 255 (262)
|+++.+ .++++++.+.+|.
T Consensus 232 H~~~~e-~~~~~~~~i~~~l 250 (251)
T TIGR03695 232 HNIHLE-NPEAFAKILLAFL 250 (251)
T ss_pred CCcCcc-ChHHHHHHHHHHh
Confidence 999754 3566777766664
No 37
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.88 E-value=5.3e-21 Score=161.13 Aligned_cols=77 Identities=14% Similarity=0.059 Sum_probs=65.5
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEeChhHHHHHHHHHhCccchheeeEecccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~-i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
+.+|+++|+||||+|..... ..++..++++++.+++++++ .++++|+||||||.+++.++.++|++|++||++++..
T Consensus 45 g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 45 GYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATM 122 (273)
T ss_pred CCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEecccc
Confidence 46899999999999854321 12566678999999999985 5899999999999999999999999999999997753
No 38
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.87 E-value=5e-21 Score=193.14 Aligned_cols=227 Identities=14% Similarity=0.112 Sum_probs=129.3
Q ss_pred ceeEEeecCCCCCCCCCCCC------CCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 2 EVQEEALHQRGAGKSTPHAC------LDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~------~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
+.+||++|+||||.|+.... ...++...+++++.++++++++++++|+||||||.+|+.+|.+||++|+++|++
T Consensus 1397 ~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVli 1476 (1655)
T PLN02980 1397 SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVII 1476 (1655)
T ss_pred CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEE
Confidence 36899999999999974321 113456679999999999999999999999999999999999999999999998
Q ss_pred ccccchhhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 024796 76 GIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEEN 155 (262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (262)
++.+.......+..+.. .......... . .....+...+..............+..+....
T Consensus 1477 s~~p~~~~~~~~~~~~~----~~~~~~~~l~---~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 1536 (1655)
T PLN02980 1477 SGSPGLKDEVARKIRSA----KDDSRARMLI---D----HGLEIFLENWYSGELWKSLRNHPHFNKIVASR--------- 1536 (1655)
T ss_pred CCCCccCchHHHHHHhh----hhhHHHHHHH---h----hhHHHHHHHhccHHHhhhhccCHHHHHHHHHH---------
Confidence 76432110000000000 0000000000 0 00001111111000000000000000000000
Q ss_pred cCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCC----------
Q 024796 156 IKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE---------- 225 (262)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~---------- 225 (262)
+.......+...+.. . .... ..++++.+.+| ++|||+|+|++|.+++ ..++++.+.+++
T Consensus 1537 ~~~~~~~~~~~~l~~----~----~~~~-~~dl~~~L~~I-~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~ 1605 (1655)
T PLN02980 1537 LLHKDVPSLAKLLSD----L----SIGR-QPSLWEDLKQC-DTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGK 1605 (1655)
T ss_pred HhcCCHHHHHHHHHH----h----hhcc-cchHHHHHhhC-CCCEEEEEECCCCccH-HHHHHHHHHccccccccccccc
Confidence 000000001101100 0 0001 12345668888 5999999999999775 566778887776
Q ss_pred --CeEEEeCCCCCCCCchhHHHHHHHHHHHHHHHHhc
Q 024796 226 --ADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 260 (262)
Q Consensus 226 --~~~~~i~~aGH~~~~~~~~~~~~~~~~~~~~~~~~ 260 (262)
++++++|+|||+++.+ .++++.+.+.+|..-+.|
T Consensus 1606 ~~a~lvvI~~aGH~~~lE-~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1606 EIIEIVEIPNCGHAVHLE-NPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred cceEEEEECCCCCchHHH-CHHHHHHHHHHHHHhccc
Confidence 4899999999999865 477888888888776544
No 39
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.85 E-value=2.7e-21 Score=149.16 Aligned_cols=181 Identities=19% Similarity=0.266 Sum_probs=116.2
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChH-HHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTW-DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 80 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~-~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~ 80 (262)
.+.||++|.||+|.|.+|........+ .-+++...|+++|..+++.|+|||-||..|+-.|.++++.|.++|+.|....
T Consensus 71 ~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ay 150 (277)
T KOG2984|consen 71 QVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAY 150 (277)
T ss_pred ceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccce
Confidence 378999999999999876532222222 2577788899999999999999999999999999999999999999987532
Q ss_pred hhhhhhHHHhccccccC---H--HHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 024796 81 RKKEIDWFYEGGAAAIY---P--DAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEEN 155 (262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (262)
-. ......+ . ..|.. ..|.++..-| + ++ .-...|..|-
T Consensus 151 vn--------~~~~ma~kgiRdv~kWs~-------r~R~P~e~~Y-----g--~e---~f~~~wa~wv------------ 193 (277)
T KOG2984|consen 151 VN--------HLGAMAFKGIRDVNKWSA-------RGRQPYEDHY-----G--PE---TFRTQWAAWV------------ 193 (277)
T ss_pred ec--------chhHHHHhchHHHhhhhh-------hhcchHHHhc-----C--HH---HHHHHHHHHH------------
Confidence 10 0000000 0 00100 0000000000 0 00 0011122221
Q ss_pred cCCCCchHHHHHHHHHhhhhhcccCCCCCch-hhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCC
Q 024796 156 IKRGEDDIFSLAFARIENHYFLNKGFFPSDS-FLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADA 234 (262)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~a 234 (262)
.. + ++++. +. +. -+...+.++ +|||||++|+.|+.|+..+.-.+....+.+++.++|++
T Consensus 194 ----------D~---v-~qf~~----~~-dG~fCr~~lp~v-kcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peG 253 (277)
T KOG2984|consen 194 ----------DV---V-DQFHS----FC-DGRFCRLVLPQV-KCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEG 253 (277)
T ss_pred ----------HH---H-HHHhh----cC-CCchHhhhcccc-cCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCC
Confidence 11 0 11111 01 11 134467888 59999999999999998888888888899999999999
Q ss_pred CCCCC
Q 024796 235 GHSAN 239 (262)
Q Consensus 235 GH~~~ 239 (262)
+|-.|
T Consensus 254 kHn~h 258 (277)
T KOG2984|consen 254 KHNFH 258 (277)
T ss_pred Cccee
Confidence 99887
No 40
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.85 E-value=4.8e-20 Score=161.60 Aligned_cols=74 Identities=23% Similarity=0.244 Sum_probs=66.0
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
.+|+++|+||||.|..... ..+..++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.
T Consensus 158 ~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 158 RPVIALDLPGHGASSKAVG--AGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred CEEEEEcCCCCCCCCCCCC--CCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 6899999999999964332 3566689999999999999999999999999999999999999999999999764
No 41
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.85 E-value=3.3e-20 Score=157.57 Aligned_cols=77 Identities=27% Similarity=0.348 Sum_probs=64.2
Q ss_pred ceeEEeecCCCCCCCC-CCCCCCCCC-hHHHHHHHHHHHHHhCC----CceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 2 EVQEEALHQRGAGKST-PHACLDQNT-TWDLIDDIEKLRQHLEI----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~-~~~~~~~~~-~~~~~~dl~~l~~~l~i----~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
+..|+++|+||||+|. +..+ ..+ ..++.+|+..+++.... .+++|+||||||.|++.|+.+++.+|+++||+
T Consensus 61 G~~V~~~D~RGhG~S~r~~rg--~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLs 138 (298)
T COG2267 61 GFDVYALDLRGHGRSPRGQRG--HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLS 138 (298)
T ss_pred CCEEEEecCCCCCCCCCCCcC--CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEE
Confidence 4679999999999997 3222 223 34699999999998764 47999999999999999999999999999999
Q ss_pred ccccc
Q 024796 76 GIFLL 80 (262)
Q Consensus 76 ~~~~~ 80 (262)
+|...
T Consensus 139 sP~~~ 143 (298)
T COG2267 139 SPALG 143 (298)
T ss_pred Ccccc
Confidence 98643
No 42
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.85 E-value=1.6e-19 Score=158.62 Aligned_cols=77 Identities=16% Similarity=0.054 Sum_probs=64.3
Q ss_pred eeEEeecCCCCCCCCCC-----------C--------CCCCCChHHHHHHHHHHHHHhCCCceE-EEEeChhHHHHHHHH
Q 024796 3 VQEEALHQRGAGKSTPH-----------A--------CLDQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYS 62 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~-----------~--------~~~~~~~~~~~~dl~~l~~~l~i~~~~-l~GhS~GG~va~~~a 62 (262)
.-||.+|..|-|+|+.| + .++.++..++++++.+++++||+++++ |+||||||++|+++|
T Consensus 100 yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a 179 (389)
T PRK06765 100 YFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWA 179 (389)
T ss_pred eEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHH
Confidence 56899999998764211 0 123467778999999999999999997 999999999999999
Q ss_pred HhCccchheeeEecccc
Q 024796 63 LAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 63 ~~~p~rv~~lVl~~~~~ 79 (262)
.+||++|++||++++.+
T Consensus 180 ~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 180 VHYPHMVERMIGVIGNP 196 (389)
T ss_pred HHChHhhheEEEEecCC
Confidence 99999999999997654
No 43
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.85 E-value=5.1e-20 Score=162.19 Aligned_cols=218 Identities=16% Similarity=0.091 Sum_probs=123.4
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC----ceEEEEeChhHHHHHHHHHhCcc---chheeeE
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP----EWQVFGGSWGSTLALAYSLAHPD---KVTGLVL 74 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~----~~~l~GhS~GG~va~~~a~~~p~---rv~~lVl 74 (262)
+.+|+++|+||||+|+.... ...+...+++|+.++++.++.+ +++|+||||||.+++.++ .+|+ +|+++|+
T Consensus 163 Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL 240 (395)
T PLN02652 163 GFGVYAMDWIGHGGSDGLHG-YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVL 240 (395)
T ss_pred CCEEEEeCCCCCCCCCCCCC-CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHH-hccCcccccceEEE
Confidence 46899999999999986432 1234556899999999988643 699999999999999876 4664 8999999
Q ss_pred eccccchhhhhhHHHhccccccCHHHHHHHHh-hCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCc
Q 024796 75 RGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD-LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNE 153 (262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (262)
.++.........+.. ....... ..+...... ........ ..+.... ... ..+|
T Consensus 241 ~sP~l~~~~~~~~~~----------~~~~l~~~~~p~~~~~~-~~~~~~~~-s~~~~~~---------~~~-----~~dp 294 (395)
T PLN02652 241 TSPALRVKPAHPIVG----------AVAPIFSLVAPRFQFKG-ANKRGIPV-SRDPAAL---------LAK-----YSDP 294 (395)
T ss_pred ECcccccccchHHHH----------HHHHHHHHhCCCCcccC-cccccCCc-CCCHHHH---------HHH-----hcCC
Confidence 887532110000000 0000000 000000000 00000000 0000000 000 0011
Q ss_pred cccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCC--CCeEEEe
Q 024796 154 ENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVV 231 (262)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p--~~~~~~i 231 (262)
... ..... ...... .... ...+.+.+.+| ++|+||++|++|.++|.+.++++.+.++ +.+++++
T Consensus 295 ~~~-~g~i~-~~~~~~-----~~~~------~~~l~~~L~~I-~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~ 360 (395)
T PLN02652 295 LVY-TGPIR-VRTGHE-----ILRI------SSYLTRNFKSV-TVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLY 360 (395)
T ss_pred Ccc-cCCch-HHHHHH-----HHHH------HHHHHhhcccC-CCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEE
Confidence 100 00000 000000 0000 01123456788 5999999999999999998888877764 5789999
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHhcC
Q 024796 232 ADAGHSANEPGIAAELVATNEKLKNLIKNG 261 (262)
Q Consensus 232 ~~aGH~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (262)
|+++|.+..+...+++++.+.+|.+--.+.
T Consensus 361 ~ga~H~l~~e~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 361 DGFLHDLLFEPEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred CCCeEEeccCCCHHHHHHHHHHHHHHHhhc
Confidence 999999854445788888888887755443
No 44
>PLN02511 hydrolase
Probab=99.84 E-value=6.8e-20 Score=161.62 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=60.6
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC----CceEEEEeChhHHHHHHHHHhCccc--hheeeEe
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI----PEWQVFGGSWGSTLALAYSLAHPDK--VTGLVLR 75 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i----~~~~l~GhS~GG~va~~~a~~~p~r--v~~lVl~ 75 (262)
+.+||++|+||||.|+...+ .......++|+.+++++++. .+++++||||||.+++.|+.++|++ |.++|++
T Consensus 129 g~~vv~~d~rG~G~s~~~~~--~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~i 206 (388)
T PLN02511 129 GWRVVVFNSRGCADSPVTTP--QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSL 206 (388)
T ss_pred CCEEEEEecCCCCCCCCCCc--CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEE
Confidence 46899999999999975321 22223568899999988876 5799999999999999999999998 8888877
Q ss_pred ccc
Q 024796 76 GIF 78 (262)
Q Consensus 76 ~~~ 78 (262)
++.
T Consensus 207 s~p 209 (388)
T PLN02511 207 CNP 209 (388)
T ss_pred CCC
Confidence 553
No 45
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.80 E-value=1.3e-18 Score=142.82 Aligned_cols=211 Identities=16% Similarity=0.127 Sum_probs=120.4
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC------CceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI------PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i------~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
+.-|+++|++|||+|++...+ -.+.+.+++|+..+.+.... -...++||||||.|++.+++++|+...++|++
T Consensus 82 g~~v~a~D~~GhG~SdGl~~y-i~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilv 160 (313)
T KOG1455|consen 82 GFAVYAIDYEGHGRSDGLHAY-VPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILV 160 (313)
T ss_pred CCeEEEeeccCCCcCCCCccc-CCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceee
Confidence 356899999999999864321 12444689999888886422 14678899999999999999999999999998
Q ss_pred ccccchhhh--hhHHHhccccccCHHHHHHHHhhCChhhh---hHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCC
Q 024796 76 GIFLLRKKE--IDWFYEGGAAAIYPDAWESFRDLIPENER---SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLL 150 (262)
Q Consensus 76 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (262)
++.-..... ..+.... ....+...+|.... .+.+.. . ..++..+. ...
T Consensus 161 aPmc~i~~~~kp~p~v~~--------~l~~l~~liP~wk~vp~~d~~~~----~-~kdp~~r~--------------~~~ 213 (313)
T KOG1455|consen 161 APMCKISEDTKPHPPVIS--------ILTLLSKLIPTWKIVPTKDIIDV----A-FKDPEKRK--------------ILR 213 (313)
T ss_pred ecccccCCccCCCcHHHH--------HHHHHHHhCCceeecCCcccccc----c-cCCHHHHH--------------Hhh
Confidence 874321100 0010000 00000001111000 000000 0 01111110 011
Q ss_pred CCccccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhC--CCCeE
Q 024796 151 PNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADF 228 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~ 228 (262)
.||-......+ +..+.+ . ++-..++..++.++ ++|.+|+||+.|.+|.+..++.+.+.. .+.++
T Consensus 214 ~npl~y~g~pR--l~T~~E-----l------Lr~~~~le~~l~~v-tvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTl 279 (313)
T KOG1455|consen 214 SDPLCYTGKPR--LKTAYE-----L------LRVTADLEKNLNEV-TVPFLILHGTDDKVTDPKVSKELYEKASSSDKTL 279 (313)
T ss_pred cCCceecCCcc--HHHHHH-----H------HHHHHHHHHhcccc-cccEEEEecCCCcccCcHHHHHHHHhccCCCCce
Confidence 22222211111 000000 0 01012345578888 599999999999999999999888776 47789
Q ss_pred EEeCCCCCCCC--c-hhHHHHHHHHHHHH
Q 024796 229 KVVADAGHSAN--E-PGIAAELVATNEKL 254 (262)
Q Consensus 229 ~~i~~aGH~~~--~-~~~~~~~~~~~~~~ 254 (262)
.+|||.-|.++ | +++.+.+....-++
T Consensus 280 KlYpGm~H~Ll~gE~~en~e~Vf~DI~~W 308 (313)
T KOG1455|consen 280 KLYPGMWHSLLSGEPDENVEIVFGDIISW 308 (313)
T ss_pred eccccHHHHhhcCCCchhHHHHHHHHHHH
Confidence 99999999886 4 34444444554444
No 46
>PRK05855 short chain dehydrogenase; Validated
Probab=99.80 E-value=3.1e-18 Score=158.54 Aligned_cols=76 Identities=17% Similarity=0.205 Sum_probs=61.4
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCc-eEEEEeChhHHHHHHHHHh--CccchheeeEecc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGI 77 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~-~~l~GhS~GG~va~~~a~~--~p~rv~~lVl~~~ 77 (262)
..+||++|+||||+|+++.....++..++++|+..+++++++++ ++|+||||||.+++.++.+ +|+++..++.++.
T Consensus 51 ~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 51 RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 36899999999999986433234677789999999999999877 9999999999999998876 3566666665543
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.79 E-value=6.9e-18 Score=140.59 Aligned_cols=222 Identities=14% Similarity=0.147 Sum_probs=130.5
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC----CCceEEEEeChhH-HHHHHHHHhCccchheeeEec
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE----IPEWQVFGGSWGS-TLALAYSLAHPDKVTGLVLRG 76 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~----i~~~~l~GhS~GG-~va~~~a~~~p~rv~~lVl~~ 76 (262)
..++++.|+|-||.|+... .++...+++|+..|++..+ ..+++++|||||| .+++.+++.+|+++.++|+.+
T Consensus 80 ~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D 156 (315)
T KOG2382|consen 80 GRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVED 156 (315)
T ss_pred cCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEe
Confidence 3589999999999997543 3456689999999999974 6789999999999 999999999999999999988
Q ss_pred cccchhhhhhHHHhccccccCHHHHHHHHhhCCh-----hhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhc-CC
Q 024796 77 IFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE-----NERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAH-LL 150 (262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 150 (262)
..+..... ..+. ..+.+..... ++. ..+......+....... ....| -...-+ -.
T Consensus 157 ~sP~~~~~-----~~~e---~~e~i~~m~~-~d~~~~~~~~rke~~~~l~~~~~d~-------~~~~f---i~~nl~~~~ 217 (315)
T KOG2382|consen 157 ISPGGVGR-----SYGE---YRELIKAMIQ-LDLSIGVSRGRKEALKSLIEVGFDN-------LVRQF---ILTNLKKSP 217 (315)
T ss_pred cCCccCCc-----ccch---HHHHHHHHHh-ccccccccccHHHHHHHHHHHhcch-------HHHHH---HHHhcCcCC
Confidence 76521000 0000 0001111110 110 11112222221111100 00111 111100 00
Q ss_pred CCccccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEE
Q 024796 151 PNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKV 230 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~ 230 (262)
.+....-....+.....+.... ...+ +.+ ... ... ..|||++.|.++..++.+.-.+|.+.+|+++++.
T Consensus 218 ~~~s~~w~~nl~~i~~~~~~~~-----~~s~---~~~-l~~-~~~-~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ 286 (315)
T KOG2382|consen 218 SDGSFLWRVNLDSIASLLDEYE-----ILSY---WAD-LED-GPY-TGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHE 286 (315)
T ss_pred CCCceEEEeCHHHHHHHHHHHH-----hhcc---ccc-ccc-ccc-ccceeEEecCCCCCcChhHHHHHHHhccchheee
Confidence 0111110111111111111100 0000 111 112 333 4799999999999999988888999999999999
Q ss_pred eCCCCCCCCchhHHHHHHHHHHHHHHH
Q 024796 231 VADAGHSANEPGIAAELVATNEKLKNL 257 (262)
Q Consensus 231 i~~aGH~~~~~~~~~~~~~~~~~~~~~ 257 (262)
+++||||+|.+ .++++++.+-+|.+.
T Consensus 287 ld~aGHwVh~E-~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 287 LDEAGHWVHLE-KPEEFIESISEFLEE 312 (315)
T ss_pred cccCCceeecC-CHHHHHHHHHHHhcc
Confidence 99999999977 588999988888754
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.79 E-value=2e-18 Score=149.42 Aligned_cols=59 Identities=10% Similarity=0.147 Sum_probs=48.5
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhC--CCCeEEEeCCCCCCCCchhHHHHHHHHHHHHH
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLK 255 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~aGH~~~~~~~~~~~~~~~~~~~ 255 (262)
++|+|+++|++|.+++.+.++.+.+.+ ++.+++++++++|.++.+...+++++.+.+|.
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL 330 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWI 330 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHh
Confidence 489999999999999998888776655 67899999999999875544677777777774
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.77 E-value=2.9e-17 Score=138.51 Aligned_cols=202 Identities=13% Similarity=0.089 Sum_probs=114.8
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-----CCCceEEEEeChhHHHHHHHHHhCccchheeeEec
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 76 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-----~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~ 76 (262)
...|+++|+||||+|+... .+..+..+|+.++++.+ ++++++++||||||.+++.+|.. +++|+++|+++
T Consensus 57 G~~v~~~Dl~G~G~S~~~~----~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~ 131 (274)
T TIGR03100 57 GFPVLRFDYRGMGDSEGEN----LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLN 131 (274)
T ss_pred CCEEEEeCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEEC
Confidence 4689999999999997431 23445678887777776 67889999999999999999865 57999999998
Q ss_pred cccchhhhhhHHHhccccccCHHHHHH-HHhhCChhhhhHHHHHHHHHhCCC-CHHHHHH-HHHHHHHHHHhhhcCCCCc
Q 024796 77 IFLLRKKEIDWFYEGGAAAIYPDAWES-FRDLIPENERSCFVDAYSKRLNSD-DKETQYA-AARAWTKWEMMTAHLLPNE 153 (262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 153 (262)
++....... .+..... +...... ..++..+ +.+. +...... .......|. ....
T Consensus 132 p~~~~~~~~-----------~~~~~~~~~~~~~~~---~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~------~~~~ 188 (274)
T TIGR03100 132 PWVRTEAAQ-----------AASRIRHYYLGQLLS---ADFWRKL---LSGEVNLGSSLRGLGDALLKAR------QKGD 188 (274)
T ss_pred CccCCcccc-----------hHHHHHHHHHHHHhC---hHHHHHh---cCCCccHHHHHHHHHHHHHhhh------hcCC
Confidence 753211000 0000000 0000000 0000000 0000 0000000 000000000 0000
Q ss_pred cccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChh-----HHHHHhhC--CCC
Q 024796 154 ENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS-----AWDLHKAW--PEA 226 (262)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~-----~~~~~~~~--p~~ 226 (262)
.... .....++...+.++ ++|+|+++|++|...+.-. +...++.+ +++
T Consensus 189 ~~~~------------------------~~~~~~~~~~l~~~-~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v 243 (274)
T TIGR03100 189 EVAH------------------------GGLAERMKAGLERF-QGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGI 243 (274)
T ss_pred Cccc------------------------chHHHHHHHHHHhc-CCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCe
Confidence 0000 00012334456777 5999999999998753211 13333434 899
Q ss_pred eEEEeCCCCCCCCchhHHHHHHHHHHHHHH
Q 024796 227 DFKVVADAGHSANEPGIAAELVATNEKLKN 256 (262)
Q Consensus 227 ~~~~i~~aGH~~~~~~~~~~~~~~~~~~~~ 256 (262)
+++.+|++||++..++..+++.+.+.+|.+
T Consensus 244 ~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 244 ERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred EEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 999999999999777778888899998864
No 50
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.77 E-value=7.8e-18 Score=152.14 Aligned_cols=218 Identities=13% Similarity=0.083 Sum_probs=117.4
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHH---H-HHHHhC-ccchheeeEec
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLA---L-AYSLAH-PDKVTGLVLRG 76 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va---~-~~a~~~-p~rv~~lVl~~ 76 (262)
+.+|+++|+||+|.|....+..+|....+.+.|+.+++.+|.++++++||||||.++ + .|+..+ |++|+++|+++
T Consensus 220 Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~ 299 (532)
T TIGR01838 220 GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFT 299 (532)
T ss_pred CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEe
Confidence 468999999999998754433344444577788999999999999999999999985 2 356665 88999999988
Q ss_pred cccchh--hhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCC-Cc
Q 024796 77 IFLLRK--KEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLP-NE 153 (262)
Q Consensus 77 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 153 (262)
+..... ..+..+.... . ....+....... ......+...+..+...+- .|..+-.. .+.. .+
T Consensus 300 t~~Df~~~G~l~~f~~~~--~--~~~~e~~~~~~G-~lpg~~m~~~F~~lrp~~l--------~w~~~v~~--yl~g~~~ 364 (532)
T TIGR01838 300 TLLDFSDPGELGVFVDEE--I--VAGIERQNGGGG-YLDGRQMAVTFSLLRENDL--------IWNYYVDN--YLKGKSP 364 (532)
T ss_pred cCcCCCCcchhhhhcCch--h--HHHHHHHHHhcC-CCCHHHHHHHHHhcChhhH--------HHHHHHHH--HhcCCCc
Confidence 743211 1111110000 0 000000000000 0000111111111111100 01000000 0000 00
Q ss_pred c------cc---CCCCchHHHHHHHHHhhhhhcccCCCCCc---hhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHh
Q 024796 154 E------NI---KRGEDDIFSLAFARIENHYFLNKGFFPSD---SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHK 221 (262)
Q Consensus 154 ~------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~ 221 (262)
. +. .+.....+...+.. .+..+.+.... .+....+.+| ++|+|+|+|++|.++|.+.++.+.+
T Consensus 365 ~~fdll~Wn~D~t~lP~~~~~~~lr~----ly~~N~L~~G~~~v~g~~~dL~~I-~vPvLvV~G~~D~IvP~~sa~~l~~ 439 (532)
T TIGR01838 365 VPFDLLFWNSDSTNLPGKMHNFYLRN----LYLQNALTTGGLEVCGVRLDLSKV-KVPVYIIATREDHIAPWQSAYRGAA 439 (532)
T ss_pred cchhHHHHhccCccchHHHHHHHHHH----HHhcCCCcCCeeEECCEecchhhC-CCCEEEEeeCCCCcCCHHHHHHHHH
Confidence 0 00 00001111111111 12222211111 1223468888 5999999999999999998899999
Q ss_pred hCCCCeEEEeCCCCCCCC
Q 024796 222 AWPEADFKVVADAGHSAN 239 (262)
Q Consensus 222 ~~p~~~~~~i~~aGH~~~ 239 (262)
.+++.+..+++++||.++
T Consensus 440 ~i~~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 440 LLGGPKTFVLGESGHIAG 457 (532)
T ss_pred HCCCCEEEEECCCCCchH
Confidence 999999999999999986
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.74 E-value=1.4e-16 Score=141.35 Aligned_cols=186 Identities=11% Similarity=0.116 Sum_probs=108.6
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh---CCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l---~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
+..|+++|+||||.|.+... ..+...+..++.+.+... +.+++.++||||||++|+.+|..+|++|+++|++++.
T Consensus 222 Gy~vl~~D~pG~G~s~~~~~--~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~ 299 (414)
T PRK05077 222 GIAMLTIDMPSVGFSSKWKL--TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPV 299 (414)
T ss_pred CCEEEEECCCCCCCCCCCCc--cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCc
Confidence 46799999999999965321 122333445555555544 5578999999999999999999999999999999875
Q ss_pred cchhhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCC
Q 024796 79 LLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR 158 (262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (262)
.... ... . .....++.. ....+...+... .
T Consensus 300 ~~~~--------------~~~-~-~~~~~~p~~----~~~~la~~lg~~------------------------------~ 329 (414)
T PRK05077 300 VHTL--------------LTD-P-KRQQQVPEM----YLDVLASRLGMH------------------------------D 329 (414)
T ss_pred cchh--------------hcc-h-hhhhhchHH----HHHHHHHHhCCC------------------------------C
Confidence 3100 000 0 000001000 000000000000 0
Q ss_pred CCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCC
Q 024796 159 GEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA 238 (262)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~ 238 (262)
...+.+...+. .+. +.... .. ..++ ++|+|+|+|++|.++|.+.++.+++.+|+++++++|++.|.-
T Consensus 330 ~~~~~l~~~l~----~~s-----l~~~~-~l--~~~i-~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~~~~e 396 (414)
T PRK05077 330 ASDEALRVELN----RYS-----LKVQG-LL--GRRC-PTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFKPVYR 396 (414)
T ss_pred CChHHHHHHhh----hcc-----chhhh-hh--ccCC-CCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCCCccC
Confidence 00000000000 000 00000 01 1456 599999999999999999999889999999999999973332
Q ss_pred CchhHHHHHHHHHHHHHH
Q 024796 239 NEPGIAAELVATNEKLKN 256 (262)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~ 256 (262)
.+.++++.+.+|.+
T Consensus 397 ----~~~~~~~~i~~wL~ 410 (414)
T PRK05077 397 ----NFDKALQEISDWLE 410 (414)
T ss_pred ----CHHHHHHHHHHHHH
Confidence 34556666666543
No 52
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.74 E-value=1.8e-16 Score=138.31 Aligned_cols=73 Identities=16% Similarity=0.146 Sum_probs=58.8
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHH-----HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEec
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDL-----IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 76 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~-----~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~ 76 (262)
+.+|+++|.+|+|.|.... +..++ .+.++.+++..+.++++++||||||.+++.|+..+|++|+++|+++
T Consensus 94 G~~V~~~D~~g~g~s~~~~-----~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~ 168 (350)
T TIGR01836 94 GQDVYLIDWGYPDRADRYL-----TLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMV 168 (350)
T ss_pred CCeEEEEeCCCCCHHHhcC-----CHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEec
Confidence 4689999999999886432 33333 3335567777888999999999999999999999999999999988
Q ss_pred ccc
Q 024796 77 IFL 79 (262)
Q Consensus 77 ~~~ 79 (262)
+..
T Consensus 169 ~p~ 171 (350)
T TIGR01836 169 TPV 171 (350)
T ss_pred ccc
Confidence 743
No 53
>PRK10985 putative hydrolase; Provisional
Probab=99.73 E-value=8.4e-17 Score=138.90 Aligned_cols=76 Identities=14% Similarity=0.038 Sum_probs=53.2
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCC---ChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccc--hheeeEec
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQN---TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK--VTGLVLRG 76 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~---~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~r--v~~lVl~~ 76 (262)
+.+|+++|+||||.|+.... ..+ ...++..-+..+.++++..+++++||||||.++..|+.+++++ |.++|+++
T Consensus 87 G~~v~~~d~rG~g~~~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~ 165 (324)
T PRK10985 87 GWLGVVMHFRGCSGEPNRLH-RIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVS 165 (324)
T ss_pred CCEEEEEeCCCCCCCccCCc-ceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEc
Confidence 46899999999998753211 111 1122222333455556778899999999999999999888654 88988887
Q ss_pred cc
Q 024796 77 IF 78 (262)
Q Consensus 77 ~~ 78 (262)
+.
T Consensus 166 ~p 167 (324)
T PRK10985 166 AP 167 (324)
T ss_pred CC
Confidence 64
No 54
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.72 E-value=4.7e-16 Score=127.27 Aligned_cols=73 Identities=36% Similarity=0.448 Sum_probs=63.3
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEecccc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
.+|+++|+||||.|. .. .+....+++++..+++++++++++++||||||.+++.++.++|++|+++|++++..
T Consensus 51 ~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 51 YRVIAPDLRGHGRSD-PA---GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred eEEEEecccCCCCCC-cc---cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 589999999999997 11 12333459999999999999999999999999999999999999999999998653
No 55
>PRK13604 luxD acyl transferase; Provisional
Probab=99.71 E-value=4e-16 Score=131.16 Aligned_cols=175 Identities=12% Similarity=0.057 Sum_probs=101.1
Q ss_pred ceeEEeecCCCC-CCCCCCCCCCCCChHHHHHHHHHHHHHh---CCCceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 2 EVQEEALHQRGA-GKSTPHACLDQNTTWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 2 ~~~~~~~D~rG~-G~S~~~~~~~~~~~~~~~~dl~~l~~~l---~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
+..|+.||.||| |.|++... +.+.....+|+..+++.+ +.+++.|+||||||.+|+..|... +++.+|+.++
T Consensus 64 G~~vLrfD~rg~~GeS~G~~~--~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp 139 (307)
T PRK13604 64 GFHVIRYDSLHHVGLSSGTID--EFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVG 139 (307)
T ss_pred CCEEEEecCCCCCCCCCCccc--cCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCC
Confidence 467999999998 99975421 223223467776555554 567899999999999997666533 4988998877
Q ss_pred ccchhhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccC
Q 024796 78 FLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIK 157 (262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (262)
+.... +..+..... .+ ..+.. ..-|+.+.
T Consensus 140 ~~~l~----------------d~l~~~~~~-----------~~-~~~p~-----------------------~~lp~~~d 168 (307)
T PRK13604 140 VVNLR----------------DTLERALGY-----------DY-LSLPI-----------------------DELPEDLD 168 (307)
T ss_pred cccHH----------------HHHHHhhhc-----------cc-ccCcc-----------------------cccccccc
Confidence 54211 000000000 00 00000 00000000
Q ss_pred C--C-C-chHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCC--CCeEEEe
Q 024796 158 R--G-E-DDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVV 231 (262)
Q Consensus 158 ~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p--~~~~~~i 231 (262)
- . . ...|.....+ .++.. .....+.++++ ++|+|+|||++|..+|.+.++.+.+.++ +++++++
T Consensus 169 ~~g~~l~~~~f~~~~~~--------~~~~~-~~s~i~~~~~l-~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i 238 (307)
T PRK13604 169 FEGHNLGSEVFVTDCFK--------HGWDT-LDSTINKMKGL-DIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSL 238 (307)
T ss_pred cccccccHHHHHHHHHh--------cCccc-cccHHHHHhhc-CCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEe
Confidence 0 0 0 0001000000 00000 00112345667 4899999999999999999999988775 7899999
Q ss_pred CCCCCCCCch
Q 024796 232 ADAGHSANEP 241 (262)
Q Consensus 232 ~~aGH~~~~~ 241 (262)
||++|...|.
T Consensus 239 ~Ga~H~l~~~ 248 (307)
T PRK13604 239 IGSSHDLGEN 248 (307)
T ss_pred CCCccccCcc
Confidence 9999998765
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.63 E-value=1.8e-14 Score=114.88 Aligned_cols=61 Identities=15% Similarity=-0.039 Sum_probs=53.1
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
+.+|+++|+|||| .++++++.++++++++++++++||||||.+++.+|.++|. ++|++++.
T Consensus 32 ~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~ 92 (190)
T PRK11071 32 DIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPA 92 (190)
T ss_pred CCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCC
Confidence 4689999999984 2468899999999999999999999999999999999994 46777764
No 57
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.62 E-value=9.1e-15 Score=118.03 Aligned_cols=161 Identities=19% Similarity=0.232 Sum_probs=113.3
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHH----HHHHhC-CCceEEEEeChhHHHHHHHHHhCccchheeeEec
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEK----LRQHLE-IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 76 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~----l~~~l~-i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~ 76 (262)
++.|+.+|.+|+|.|++.++ +. ...+|+++ +++..| .++++|.|+|||...++.+|.++| +++|||.+
T Consensus 88 n~nv~~~DYSGyG~S~G~ps-E~----n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~S 160 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKPS-ER----NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHS 160 (258)
T ss_pred cceEEEEecccccccCCCcc-cc----cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEec
Confidence 67899999999999986543 12 23444444 444554 678999999999999999999999 99999998
Q ss_pred cccchhhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCcccc
Q 024796 77 IFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENI 156 (262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (262)
++.... +. +... .
T Consensus 161 Pf~S~~-------------------rv--------------------~~~~----------------------------~ 173 (258)
T KOG1552|consen 161 PFTSGM-------------------RV--------------------AFPD----------------------------T 173 (258)
T ss_pred cchhhh-------------------hh--------------------hccC----------------------------c
Confidence 753200 00 0000 0
Q ss_pred CCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCC-eEEEeCCCC
Q 024796 157 KRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAG 235 (262)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~-~~~~i~~aG 235 (262)
... .+ ...|. ..+.++.| ++|+||+||++|.+++..++..+-+..++. +-.++.|+|
T Consensus 174 ~~~---~~--------~d~f~----------~i~kI~~i-~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~g 231 (258)
T KOG1552|consen 174 KTT---YC--------FDAFP----------NIEKISKI-TCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAG 231 (258)
T ss_pred ceE---Ee--------ecccc----------ccCcceec-cCCEEEEecccCceecccccHHHHHhccccCCCcEEecCC
Confidence 000 00 00000 12356777 599999999999999999999998888776 788899999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHhc
Q 024796 236 HSANEPGIAAELVATNEKLKNLIKN 260 (262)
Q Consensus 236 H~~~~~~~~~~~~~~~~~~~~~~~~ 260 (262)
|.-- +...++++.+.+|.+.+.+
T Consensus 232 H~~~--~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 232 HNDI--ELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred Cccc--ccCHHHHHHHHHHHHHhcc
Confidence 9642 2455689999999887764
No 58
>PRK10566 esterase; Provisional
Probab=99.60 E-value=4.3e-14 Score=117.29 Aligned_cols=76 Identities=18% Similarity=0.121 Sum_probs=49.1
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCCh-H----HHHHHHHHHHHHh------CCCceEEEEeChhHHHHHHHHHhCccchh
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTT-W----DLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVT 70 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~-~----~~~~dl~~l~~~l------~i~~~~l~GhS~GG~va~~~a~~~p~rv~ 70 (262)
...|+++|.||||.|....+...... + ...+|+.++++.+ +.++++++||||||.+++.++.++|+...
T Consensus 54 G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~ 133 (249)
T PRK10566 54 GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKC 133 (249)
T ss_pred CCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeE
Confidence 46799999999998642211001111 1 1234444444432 34689999999999999999999987555
Q ss_pred eeeEecc
Q 024796 71 GLVLRGI 77 (262)
Q Consensus 71 ~lVl~~~ 77 (262)
.++++++
T Consensus 134 ~~~~~~~ 140 (249)
T PRK10566 134 VASLMGS 140 (249)
T ss_pred EEEeeCc
Confidence 5555554
No 59
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.58 E-value=1.2e-13 Score=135.30 Aligned_cols=48 Identities=21% Similarity=0.243 Sum_probs=43.2
Q ss_pred hcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeE-EEeCCCCCCCC
Q 024796 191 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADF-KVVADAGHSAN 239 (262)
Q Consensus 191 ~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~-~~i~~aGH~~~ 239 (262)
.+++| ++|+|+|+|++|.++|...++.+.+.+|++++ .+++++||+.+
T Consensus 292 ~L~~i-~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~ 340 (994)
T PRK07868 292 TLADI-TCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGL 340 (994)
T ss_pred chhhC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEee
Confidence 47888 59999999999999999999999999999997 78899999963
No 60
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.57 E-value=1.2e-13 Score=108.84 Aligned_cols=196 Identities=17% Similarity=0.157 Sum_probs=117.4
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHH---HHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDI---EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl---~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
+..|.++-+||||..... +-..+..++-+|+ .+-+...|-+.+.++|.||||.+|+-+|.++| ++++|.+++.
T Consensus 42 GyTv~aP~ypGHG~~~e~--fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~ 117 (243)
T COG1647 42 GYTVYAPRYPGHGTLPED--FLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAP 117 (243)
T ss_pred CceEecCCCCCCCCCHHH--HhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCC
Confidence 357999999999987521 1123444555554 44555557889999999999999999999999 9999998775
Q ss_pred cchhhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCC
Q 024796 79 LLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR 158 (262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (262)
..... | ..++.. ++ ..++.+ +.....+.+...+....+. ..|.
T Consensus 118 ~~~k~---~------~~iie~----~l---------~y~~~~-kk~e~k~~e~~~~e~~~~~----------~~~~---- 160 (243)
T COG1647 118 VNVKS---W------RIIIEG----LL---------EYFRNA-KKYEGKDQEQIDKEMKSYK----------DTPM---- 160 (243)
T ss_pred ccccc---c------hhhhHH----HH---------HHHHHh-hhccCCCHHHHHHHHHHhh----------cchH----
Confidence 32110 0 000000 00 001111 1111111111111110000 0000
Q ss_pred CCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhC--CCCeEEEeCCCCC
Q 024796 159 GEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGH 236 (262)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~aGH 236 (262)
... ..+..+ ..+....+..| ..||+|+.|++|..+|.+.+..+.+.+ .+-++.+++++||
T Consensus 161 ---~~~-~~~~~~-------------i~~~~~~~~~I-~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgH 222 (243)
T COG1647 161 ---TTT-AQLKKL-------------IKDARRSLDKI-YSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGH 222 (243)
T ss_pred ---HHH-HHHHHH-------------HHHHHhhhhhc-ccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCc
Confidence 000 001100 01223457788 489999999999999999999888876 3567999999999
Q ss_pred CCCchhHHHHHHHHHHHHHH
Q 024796 237 SANEPGIAAELVATNEKLKN 256 (262)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~ 256 (262)
-.-.+++.+++-|++-.|.+
T Consensus 223 VIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 223 VITLDKERDQVEEDVITFLE 242 (243)
T ss_pred eeecchhHHHHHHHHHHHhh
Confidence 88666677777788888764
No 61
>PLN02872 triacylglycerol lipase
Probab=99.52 E-value=3.6e-13 Score=118.61 Aligned_cols=77 Identities=18% Similarity=0.111 Sum_probs=56.8
Q ss_pred ceeEEeecCCCCCCCCCC-------CCCCCCChHHHH-HHHHHHHHHh---CCCceEEEEeChhHHHHHHHHHhCcc---
Q 024796 2 EVQEEALHQRGAGKSTPH-------ACLDQNTTWDLI-DDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPD--- 67 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~-------~~~~~~~~~~~~-~dl~~l~~~l---~i~~~~l~GhS~GG~va~~~a~~~p~--- 67 (262)
+..|+++|+||+|.|.++ ...++++..+++ .|+.++++++ ..++++++||||||.+++.++ .+|+
T Consensus 107 GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~ 185 (395)
T PLN02872 107 GFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVE 185 (395)
T ss_pred CCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHH
Confidence 357999999999876321 111234444566 7999999986 337899999999999999555 6887
Q ss_pred chheeeEecccc
Q 024796 68 KVTGLVLRGIFL 79 (262)
Q Consensus 68 rv~~lVl~~~~~ 79 (262)
+|++++++++..
T Consensus 186 ~v~~~~~l~P~~ 197 (395)
T PLN02872 186 MVEAAALLCPIS 197 (395)
T ss_pred HHHHHHHhcchh
Confidence 788888887653
No 62
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.51 E-value=1.5e-12 Score=105.56 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=104.2
Q ss_pred ceeEEeecCCCCCCCCCC--CCCCCCChHHHHHHHHHHHHHh----CC--CceEEEEeChhHHHHHHHHHhCccchheee
Q 024796 2 EVQEEALHQRGAGKSTPH--ACLDQNTTWDLIDDIEKLRQHL----EI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLV 73 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~--~~~~~~~~~~~~~dl~~l~~~l----~i--~~~~l~GhS~GG~va~~~a~~~p~rv~~lV 73 (262)
+..|+.+|.||.+..... ...........++|+.+.++.+ .+ +++.|+|||+||.+++..+.++|++++++|
T Consensus 14 Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~v 93 (213)
T PF00326_consen 14 GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAAV 93 (213)
T ss_dssp T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEEE
T ss_pred CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeeee
Confidence 467999999998743211 0000111123566766666555 33 589999999999999999999999999998
Q ss_pred EeccccchhhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCc
Q 024796 74 LRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNE 153 (262)
Q Consensus 74 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (262)
..++....... ... .. .+........ . ++
T Consensus 94 ~~~g~~d~~~~------------~~~--------~~-----~~~~~~~~~~-~-------------------------~~ 122 (213)
T PF00326_consen 94 AGAGVSDLFSY------------YGT--------TD-----IYTKAEYLEY-G-------------------------DP 122 (213)
T ss_dssp EESE-SSTTCS------------BHH--------TC-----CHHHGHHHHH-S-------------------------ST
T ss_pred ccceecchhcc------------ccc--------cc-----cccccccccc-C-------------------------cc
Confidence 87664311100 000 00 0000000000 0 00
Q ss_pred cccCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhccc--ccCCceeEEeeCCCCCCCChhHHHHHhhC----CCCe
Q 024796 154 ENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDN--IRHINATIVQGRYDVCCPMMSAWDLHKAW----PEAD 227 (262)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~ 227 (262)
.. ..+.+. .... ...+.+ + ++|+|++||++|..+|...+.++.+.+ ..++
T Consensus 123 ~~----~~~~~~----~~s~---------------~~~~~~~~~-~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~ 178 (213)
T PF00326_consen 123 WD----NPEFYR----ELSP---------------ISPADNVQI-KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVE 178 (213)
T ss_dssp TT----SHHHHH----HHHH---------------GGGGGGCGG-GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEE
T ss_pred ch----hhhhhh----hhcc---------------ccccccccC-CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEE
Confidence 00 000010 0000 011222 5 589999999999999998877666544 4589
Q ss_pred EEEeCCCCCCCCchhHHHHHHHHHHHHHHHHhc
Q 024796 228 FKVVADAGHSANEPGIAAELVATNEKLKNLIKN 260 (262)
Q Consensus 228 ~~~i~~aGH~~~~~~~~~~~~~~~~~~~~~~~~ 260 (262)
++++|++||....++...+..+...+|.+.-.+
T Consensus 179 ~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 179 LLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp EEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 999999999776554555666777666655443
No 63
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.51 E-value=1.2e-13 Score=115.15 Aligned_cols=76 Identities=18% Similarity=0.114 Sum_probs=62.1
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHH---HHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKL---RQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l---~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
+.+|+++|+||||.|+.... ..+...+++|+..+ ++++++++++|+||||||.+++.+|.++|++++++||+++.
T Consensus 56 Gy~Vl~~Dl~G~G~S~g~~~--~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 56 GFGVLQIDLYGCGDSAGDFA--AARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred CCEEEEECCCCCCCCCCccc--cCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 46899999999999975432 23444577887664 45557889999999999999999999999999999999875
Q ss_pred c
Q 024796 79 L 79 (262)
Q Consensus 79 ~ 79 (262)
.
T Consensus 134 ~ 134 (266)
T TIGR03101 134 V 134 (266)
T ss_pred c
Confidence 4
No 64
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.49 E-value=1.4e-13 Score=111.71 Aligned_cols=76 Identities=22% Similarity=0.310 Sum_probs=61.5
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh---CCCceEEEEeChhHHHHHHHHHh--CccchheeeEec
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRG 76 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l---~i~~~~l~GhS~GG~va~~~a~~--~p~rv~~lVl~~ 76 (262)
+.+|+++|+||||.|.-.. ..+.+.++++.|+-.+++.+ ..++++|+||||||.||...|.. -|. +.+||+++
T Consensus 102 ~~r~~a~DlRgHGeTk~~~-e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viD 179 (343)
T KOG2564|consen 102 RCRCLALDLRGHGETKVEN-EDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVID 179 (343)
T ss_pred ceeEEEeeccccCccccCC-hhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEE
Confidence 5789999999999986322 23567778999999999886 24689999999999999887764 366 88999998
Q ss_pred ccc
Q 024796 77 IFL 79 (262)
Q Consensus 77 ~~~ 79 (262)
...
T Consensus 180 VVE 182 (343)
T KOG2564|consen 180 VVE 182 (343)
T ss_pred Eec
Confidence 754
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.49 E-value=2.6e-13 Score=102.89 Aligned_cols=119 Identities=20% Similarity=0.290 Sum_probs=86.7
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
+..|+.+|+||+|.+... .....+.+++. .+..+.+++.|+|||+||.+++.++.+. .+|+++|++++.+.
T Consensus 26 G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~- 96 (145)
T PF12695_consen 26 GYAVVAFDYPGHGDSDGA-----DAVERVLADIR--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD- 96 (145)
T ss_dssp TEEEEEESCTTSTTSHHS-----HHHHHHHHHHH--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG-
T ss_pred CCEEEEEecCCCCccchh-----HHHHHHHHHHH--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc-
Confidence 467999999999998321 11122333332 1223678999999999999999999999 89999999876210
Q ss_pred hhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccccCCCCc
Q 024796 82 KKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGED 161 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (262)
.
T Consensus 97 ---------------------------~---------------------------------------------------- 97 (145)
T PF12695_consen 97 ---------------------------S---------------------------------------------------- 97 (145)
T ss_dssp ---------------------------C----------------------------------------------------
T ss_pred ---------------------------h----------------------------------------------------
Confidence 0
Q ss_pred hHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCC-CCeEEEeCCCCCC
Q 024796 162 DIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHS 237 (262)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~aGH~ 237 (262)
+.+.+. ++|+++++|++|..++.+..+++.+.++ +.++++++|++|+
T Consensus 98 ----------------------------~~~~~~-~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 ----------------------------EDLAKI-RIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------------------HHHTTT-TSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------------------hhhhcc-CCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 001122 4799999999999999888888877777 5789999999995
No 66
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.36 E-value=4e-11 Score=101.17 Aligned_cols=77 Identities=18% Similarity=0.239 Sum_probs=56.2
Q ss_pred ceeEEeecC--CCCCCCCCCC-----------------C-CCCCChHH-HHHHHHHHHHH---hCCCceEEEEeChhHHH
Q 024796 2 EVQEEALHQ--RGAGKSTPHA-----------------C-LDQNTTWD-LIDDIEKLRQH---LEIPEWQVFGGSWGSTL 57 (262)
Q Consensus 2 ~~~~~~~D~--rG~G~S~~~~-----------------~-~~~~~~~~-~~~dl~~l~~~---l~i~~~~l~GhS~GG~v 57 (262)
++.||++|. ||+|.|.... + ...+...+ +++++..++++ ++.+++.|+||||||.+
T Consensus 72 g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~ 151 (275)
T TIGR02821 72 GLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHG 151 (275)
T ss_pred CcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHH
Confidence 478999998 6666443100 0 00122233 57888888877 34568999999999999
Q ss_pred HHHHHHhCccchheeeEeccc
Q 024796 58 ALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 58 a~~~a~~~p~rv~~lVl~~~~ 78 (262)
|+.+++++|+++++++++++.
T Consensus 152 a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 152 ALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHhCcccceEEEEECCc
Confidence 999999999999999987764
No 67
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.36 E-value=4.7e-12 Score=99.31 Aligned_cols=70 Identities=17% Similarity=0.198 Sum_probs=53.7
Q ss_pred eEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCc--eEEEEeChhHHHHHHHHHhCccchheeeEec
Q 024796 4 QEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPE--WQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 76 (262)
Q Consensus 4 ~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~-i~~--~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~ 76 (262)
-++-+|.+|-|.|+....+.-+. ..|+|+..+++++. ..+ .+++|||=||.+++.||+++++ ++-+|-++
T Consensus 64 s~fRfDF~GnGeS~gsf~~Gn~~--~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcs 136 (269)
T KOG4667|consen 64 SAFRFDFSGNGESEGSFYYGNYN--TEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCS 136 (269)
T ss_pred eEEEEEecCCCCcCCccccCccc--chHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcc
Confidence 46789999999998654322222 45899999999984 333 4789999999999999999998 66666543
No 68
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.35 E-value=1.5e-10 Score=98.32 Aligned_cols=77 Identities=23% Similarity=0.241 Sum_probs=59.2
Q ss_pred eeEEeecCCCCC-CCCCCCCC-----------CCCChHHHHHHHHHHHHHhCCCceE-EEEeChhHHHHHHHHHhCccch
Q 024796 3 VQEEALHQRGAG-KSTPHACL-----------DQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKV 69 (262)
Q Consensus 3 ~~~~~~D~rG~G-~S~~~~~~-----------~~~~~~~~~~dl~~l~~~l~i~~~~-l~GhS~GG~va~~~a~~~p~rv 69 (262)
..||..+..|.+ .|+.|.+. +..+..++++--..++++|||+++. +||-||||+.|++.++.|||+|
T Consensus 93 ~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V 172 (368)
T COG2021 93 FFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRV 172 (368)
T ss_pred eEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHH
Confidence 468999999987 45443321 1123334444447789999999976 9999999999999999999999
Q ss_pred heeeEecccc
Q 024796 70 TGLVLRGIFL 79 (262)
Q Consensus 70 ~~lVl~~~~~ 79 (262)
+++|.+++..
T Consensus 173 ~~~i~ia~~~ 182 (368)
T COG2021 173 RRAIPIATAA 182 (368)
T ss_pred hhhheecccc
Confidence 9999887643
No 69
>PLN02442 S-formylglutathione hydrolase
Probab=99.35 E-value=4.9e-11 Score=101.04 Aligned_cols=48 Identities=23% Similarity=0.245 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 31 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 31 ~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
.+.++.+.+.++.++++|+||||||..|+.++.+||+++++++.+++.
T Consensus 130 ~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 130 PKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 333444455568889999999999999999999999999999887764
No 70
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.33 E-value=5.1e-12 Score=111.67 Aligned_cols=76 Identities=12% Similarity=-0.026 Sum_probs=61.9
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------CCCceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
+++||++|.||||+|..+... . ....+++++.++++.| ++++++|+||||||.||..++.++|++|.+++++
T Consensus 73 d~nVI~VDw~g~g~s~y~~a~-~-~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgL 150 (442)
T TIGR03230 73 SANVIVVDWLSRAQQHYPTSA-A-YTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGL 150 (442)
T ss_pred CCEEEEEECCCcCCCCCcccc-c-cHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEE
Confidence 479999999999998754321 2 2235677777777765 4689999999999999999999999999999999
Q ss_pred cccc
Q 024796 76 GIFL 79 (262)
Q Consensus 76 ~~~~ 79 (262)
++..
T Consensus 151 DPAg 154 (442)
T TIGR03230 151 DPAG 154 (442)
T ss_pred cCCC
Confidence 8854
No 71
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.33 E-value=5.2e-11 Score=98.65 Aligned_cols=214 Identities=14% Similarity=0.195 Sum_probs=107.1
Q ss_pred eEEeecCCCCCCCCC--CCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccch
Q 024796 4 QEEALHQRGAGKSTP--HACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 81 (262)
Q Consensus 4 ~~~~~D~rG~G~S~~--~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~ 81 (262)
-|+=+|.|||..-.+ +.++...++++++++|.++++++|++.++-+|--.|++|-..||++||+||.+|||+++....
T Consensus 57 ~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~ 136 (283)
T PF03096_consen 57 CIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA 136 (283)
T ss_dssp EEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-
T ss_pred EEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC
Confidence 466789999986432 333223366779999999999999999999999999999999999999999999999987665
Q ss_pred hhhhhHHHhcccc-ccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHH-HHHHHHHHHHHHHhhhcCCCCccccCCC
Q 024796 82 KKEIDWFYEGGAA-AIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKET-QYAAARAWTKWEMMTAHLLPNEENIKRG 159 (262)
Q Consensus 82 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (262)
....+|++.-... .+.. ..+... ..+.+....++..... ..+....+.. .... ..+|.++.
T Consensus 137 ~gw~Ew~~~K~~~~~L~~-------~gmt~~----~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~--~l~~--~~Np~Nl~-- 199 (283)
T PF03096_consen 137 AGWMEWFYQKLSSWLLYS-------YGMTSS----VKDYLLWHYFGKEEEENNSDLVQTYRQ--HLDE--RINPKNLA-- 199 (283)
T ss_dssp --HHHHHHHHHH--------------CTTS-----HHHHHHHHHS-HHHHHCT-HHHHHHHH--HHHT---TTHHHHH--
T ss_pred ccHHHHHHHHHhcccccc-------cccccc----hHHhhhhcccccccccccHHHHHHHHH--HHhc--CCCHHHHH--
Confidence 5555665421110 0000 001000 0011111111110000 0000100000 0000 01111110
Q ss_pred CchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhC--CCCeEEEeCCCCCC
Q 024796 160 EDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHS 237 (262)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~aGH~ 237 (262)
.|-. .+.. | .++....+.+ .||+|++.|+..+. .+...++.+.+ .++++..+++||=.
T Consensus 200 ---~f~~--------sy~~----R--~DL~~~~~~~-~c~vLlvvG~~Sp~--~~~vv~~ns~Ldp~~ttllkv~dcGgl 259 (283)
T PF03096_consen 200 ---LFLN--------SYNS----R--TDLSIERPSL-GCPVLLVVGDNSPH--VDDVVEMNSKLDPTKTTLLKVADCGGL 259 (283)
T ss_dssp ---HHHH--------HHHT-----------SECTTC-CS-EEEEEETTSTT--HHHHHHHHHHS-CCCEEEEEETT-TT-
T ss_pred ---HHHH--------HHhc----c--ccchhhcCCC-CCCeEEEEecCCcc--hhhHHHHHhhcCcccceEEEecccCCc
Confidence 0100 0111 1 2233345555 59999999999875 44456777766 36779999999999
Q ss_pred CCchhHHHHHHHHHHHHH
Q 024796 238 ANEPGIAAELVATNEKLK 255 (262)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~ 255 (262)
++++ .+..++|+..=|.
T Consensus 260 V~eE-qP~klaea~~lFl 276 (283)
T PF03096_consen 260 VLEE-QPGKLAEAFKLFL 276 (283)
T ss_dssp HHHH--HHHHHHHHHHHH
T ss_pred cccc-CcHHHHHHHHHHH
Confidence 9855 5777777666553
No 72
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.29 E-value=2.5e-10 Score=93.73 Aligned_cols=85 Identities=24% Similarity=0.329 Sum_probs=70.1
Q ss_pred EEeecCCCCCCCCC--CCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccccchh
Q 024796 5 EEALHQRGAGKSTP--HACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 82 (262)
Q Consensus 5 ~~~~D~rG~G~S~~--~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~~~~ 82 (262)
++-+|.|||=.-.+ +.++.-.++++++++|..+++++++..++=+|--.|++|-.+||+.||+||-+|||+++.....
T Consensus 81 v~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~ 160 (326)
T KOG2931|consen 81 VYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAK 160 (326)
T ss_pred EEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCc
Confidence 67789999865433 2232233667899999999999999999999999999999999999999999999998876666
Q ss_pred hhhhHHH
Q 024796 83 KEIDWFY 89 (262)
Q Consensus 83 ~~~~~~~ 89 (262)
..++|++
T Consensus 161 gwiew~~ 167 (326)
T KOG2931|consen 161 GWIEWAY 167 (326)
T ss_pred hHHHHHH
Confidence 6667765
No 73
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.28 E-value=5.1e-12 Score=99.22 Aligned_cols=167 Identities=19% Similarity=0.224 Sum_probs=104.2
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------CCCceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
.+.|..++.||+|+|.+.++... +.-|-++++++| .-.+.+|.|.|+||.+|..+|++..+|+.++|+.
T Consensus 106 ~mnv~ivsYRGYG~S~GspsE~G-----L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivE 180 (300)
T KOG4391|consen 106 KMNVLIVSYRGYGKSEGSPSEEG-----LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVE 180 (300)
T ss_pred CceEEEEEeeccccCCCCccccc-----eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeee
Confidence 46799999999999986543222 233344444444 3347899999999999999999999999999999
Q ss_pred ccccchhhhhhHHHhccccccCHHHHHHHHhhCChhhhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 024796 76 GIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEEN 155 (262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (262)
+++....+ .....+.+. .-.+...+.
T Consensus 181 NTF~SIp~----------------~~i~~v~p~--------~~k~i~~lc------------------------------ 206 (300)
T KOG4391|consen 181 NTFLSIPH----------------MAIPLVFPF--------PMKYIPLLC------------------------------ 206 (300)
T ss_pred chhccchh----------------hhhheeccc--------hhhHHHHHH------------------------------
Confidence 88643111 000000000 000000000
Q ss_pred cCCCCchHHHHHHHHHhhhhhcccCCCCCchhhhhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCC--CeEEEeCC
Q 024796 156 IKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE--ADFKVVAD 233 (262)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~ 233 (262)
.+ +.| . -...+.+. .+|.|+|.|..|.++|+.+.+.+...+|. .++..||+
T Consensus 207 -------------~k--n~~-~----------S~~ki~~~-~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~ 259 (300)
T KOG4391|consen 207 -------------YK--NKW-L----------SYRKIGQC-RMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPD 259 (300)
T ss_pred -------------HH--hhh-c----------chhhhccc-cCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCC
Confidence 00 000 0 01123333 58999999999999999887777777764 57999999
Q ss_pred CCCCCCchhHHHHHHHHHHHHHH
Q 024796 234 AGHSANEPGIAAELVATNEKLKN 256 (262)
Q Consensus 234 aGH~~~~~~~~~~~~~~~~~~~~ 256 (262)
+.|.= ....+.+..+.++|.+
T Consensus 260 gtHND--T~i~dGYfq~i~dFla 280 (300)
T KOG4391|consen 260 GTHND--TWICDGYFQAIEDFLA 280 (300)
T ss_pred CccCc--eEEeccHHHHHHHHHH
Confidence 99943 2334445556666643
No 74
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.27 E-value=7.4e-10 Score=91.01 Aligned_cols=76 Identities=24% Similarity=0.228 Sum_probs=66.1
Q ss_pred CceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC-ceEEEEeChhHHHHHHHHHhCccchheeeEecccc
Q 024796 1 MEVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP-EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 1 ~~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~-~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
+++|+|-+..||+|.|+++.+ ..++..+-..-+.+|++.|+++ +.+++|||.|+-.|+.+|..+| +.++||+++..
T Consensus 61 ~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 61 AGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred cCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCc
Confidence 578999999999999987654 3567777888899999999996 6889999999999999999996 67999998764
No 75
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.25 E-value=4.1e-10 Score=90.67 Aligned_cols=76 Identities=18% Similarity=0.175 Sum_probs=54.1
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH-hCCCceEEEEeChhHHHHHHHHHhCc---cchheeeEecc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH-LEIPEWQVFGGSWGSTLALAYSLAHP---DKVTGLVLRGI 77 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~-l~i~~~~l~GhS~GG~va~~~a~~~p---~rv~~lVl~~~ 77 (262)
++.++++.+||+|.=-..+ ...++.++++.|..-+.. +--..+.++||||||+||.+.|.+.- -...++.++++
T Consensus 33 ~iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~ 110 (244)
T COG3208 33 DIELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGC 110 (244)
T ss_pred hhheeeecCCCcccccCCc--ccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecC
Confidence 4678999999999642211 134666788888766663 33347999999999999999998652 23667777776
Q ss_pred cc
Q 024796 78 FL 79 (262)
Q Consensus 78 ~~ 79 (262)
.+
T Consensus 111 ~a 112 (244)
T COG3208 111 RA 112 (244)
T ss_pred CC
Confidence 43
No 76
>PRK11460 putative hydrolase; Provisional
Probab=99.21 E-value=2.4e-10 Score=93.99 Aligned_cols=45 Identities=18% Similarity=0.295 Sum_probs=37.1
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhC----CCCeEEEeCCCCCCCCch
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEP 241 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~aGH~~~~~ 241 (262)
..|++++||++|.++|.+.++.+.+.+ .++++++++++||....+
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~ 196 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPR 196 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHH
Confidence 479999999999999998777766655 356889999999998744
No 77
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.16 E-value=4e-09 Score=92.51 Aligned_cols=73 Identities=16% Similarity=-0.003 Sum_probs=56.7
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhC-----ccchheeeEecc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGI 77 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~-----p~rv~~lVl~~~ 77 (262)
..|+..|-.--+..+... ...+.+++++-|.++++++|-+ ++++|+|+||..++.+++.+ |+++++|+++++
T Consensus 130 ~dVYl~DW~~p~~vp~~~--~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~ 206 (406)
T TIGR01849 130 HDVYITDWVNARMVPLSA--GKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGG 206 (406)
T ss_pred CcEEEEeCCCCCCCchhc--CCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEec
Confidence 467777877666443211 1456778888889999999987 99999999999988887776 778999999876
Q ss_pred c
Q 024796 78 F 78 (262)
Q Consensus 78 ~ 78 (262)
.
T Consensus 207 P 207 (406)
T TIGR01849 207 P 207 (406)
T ss_pred C
Confidence 4
No 78
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.11 E-value=1e-09 Score=89.23 Aligned_cols=47 Identities=23% Similarity=0.282 Sum_probs=36.8
Q ss_pred HHHHHHHHHHh---CC--CceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 31 IDDIEKLRQHL---EI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 31 ~~dl~~l~~~l---~i--~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
++-+.++++.+ ++ ++++|+|.|.||++|+.+++++|+++.++|.+++
T Consensus 87 ~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG 138 (216)
T PF02230_consen 87 AERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSG 138 (216)
T ss_dssp HHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES-
T ss_pred HHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeec
Confidence 34455555532 44 4899999999999999999999999999998876
No 79
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.10 E-value=1.7e-09 Score=97.67 Aligned_cols=72 Identities=14% Similarity=0.083 Sum_probs=55.4
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHH----HHhCCCceEEEEeChhHHHHHH----HHHhCcc-chhee
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLR----QHLEIPEWQVFGGSWGSTLALA----YSLAHPD-KVTGL 72 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~----~~l~i~~~~l~GhS~GG~va~~----~a~~~p~-rv~~l 72 (262)
+.+|+++|-++-+.+.+ +.+.+++++.|.+.+ +.-|.++++++||||||.++.. |+.++++ +|++|
T Consensus 247 G~~VflIsW~nP~~~~r-----~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sl 321 (560)
T TIGR01839 247 QLQVFIISWRNPDKAHR-----EWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSL 321 (560)
T ss_pred CCeEEEEeCCCCChhhc-----CCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeE
Confidence 46899999998776653 234556665554444 4457889999999999999997 8999996 89999
Q ss_pred eEeccc
Q 024796 73 VLRGIF 78 (262)
Q Consensus 73 Vl~~~~ 78 (262)
+++.+.
T Consensus 322 tllatp 327 (560)
T TIGR01839 322 TYLVSL 327 (560)
T ss_pred Eeeecc
Confidence 987653
No 80
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.02 E-value=4.2e-10 Score=94.85 Aligned_cols=76 Identities=12% Similarity=0.018 Sum_probs=56.2
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------CCCceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
+.+||++|.+|++.+..+. .......+++++..+++.| +.++++|+||||||.+|..++.++|++|.++|++
T Consensus 66 ~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~L 143 (275)
T cd00707 66 DYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGL 143 (275)
T ss_pred CCEEEEEECccccccChHH--HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEe
Confidence 4789999999984432211 0122223456666665554 4578999999999999999999999999999999
Q ss_pred cccc
Q 024796 76 GIFL 79 (262)
Q Consensus 76 ~~~~ 79 (262)
++..
T Consensus 144 DPa~ 147 (275)
T cd00707 144 DPAG 147 (275)
T ss_pred cCCc
Confidence 8754
No 81
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.98 E-value=1.3e-08 Score=95.25 Aligned_cols=63 Identities=22% Similarity=0.277 Sum_probs=48.0
Q ss_pred cccccCCceeEEeeCCCCCCCChhHHHHHhhC----CCCeEEEeCCCCCCCCchhHHHHHHHHHHHHH
Q 024796 192 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLK 255 (262)
Q Consensus 192 l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~aGH~~~~~~~~~~~~~~~~~~~ 255 (262)
..++ ++|+|||||+.|..||.+++..+.+.+ ..+++++||+.||..-.++.....++...+|.
T Consensus 547 ~~~i-~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~ 613 (620)
T COG1506 547 ADNI-KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWF 613 (620)
T ss_pred hccc-CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHH
Confidence 4566 489999999999999998887776655 46789999999998866555555565444443
No 82
>PLN00021 chlorophyllase
Probab=98.94 E-value=9.7e-09 Score=88.01 Aligned_cols=74 Identities=14% Similarity=0.057 Sum_probs=47.6
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHH-------hCCCceEEEEeChhHHHHHHHHHhCcc-----c
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQN-TTWDLIDDIEKLRQH-------LEIPEWQVFGGSWGSTLALAYSLAHPD-----K 68 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~-~~~~~~~dl~~l~~~-------l~i~~~~l~GhS~GG~va~~~a~~~p~-----r 68 (262)
+..|+++|++|++.+.... .. +..++.+.+.+.++. .+.+++.|+||||||.+|+.+|.++|+ +
T Consensus 79 G~~VvapD~~g~~~~~~~~---~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~ 155 (313)
T PLN00021 79 GFIVVAPQLYTLAGPDGTD---EIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLK 155 (313)
T ss_pred CCEEEEecCCCcCCCCchh---hHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccc
Confidence 3679999999975432111 11 111122222222222 345789999999999999999999985 5
Q ss_pred hheeeEeccc
Q 024796 69 VTGLVLRGIF 78 (262)
Q Consensus 69 v~~lVl~~~~ 78 (262)
++++|++++.
T Consensus 156 v~ali~ldPv 165 (313)
T PLN00021 156 FSALIGLDPV 165 (313)
T ss_pred eeeEEeeccc
Confidence 7788877663
No 83
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.93 E-value=9.7e-09 Score=88.68 Aligned_cols=76 Identities=17% Similarity=0.130 Sum_probs=57.3
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccc-hheeeEecc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK-VTGLVLRGI 77 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~r-v~~lVl~~~ 77 (262)
+.+|+.+|-++=.++......++|-...+.+-|+.+.+..|+++++++||+.||+++..++..+|.+ |+++++..+
T Consensus 139 g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts 215 (445)
T COG3243 139 GLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTS 215 (445)
T ss_pred CCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeec
Confidence 3567778877765554322222222234566678888999999999999999999999999999988 999998765
No 84
>COG0400 Predicted esterase [General function prediction only]
Probab=98.91 E-value=1.8e-08 Score=80.84 Aligned_cols=48 Identities=27% Similarity=0.360 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhCC--CceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 30 LIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 30 ~~~dl~~l~~~l~i--~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
+++-|+.+.+..|+ ++.+++|+|=|+++++...+++|+.++++|+.++
T Consensus 83 ~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g 132 (207)
T COG0400 83 LAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSG 132 (207)
T ss_pred HHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCC
Confidence 56667777788888 6899999999999999999999999999998876
No 85
>PRK10162 acetyl esterase; Provisional
Probab=98.89 E-value=1.8e-07 Score=80.60 Aligned_cols=75 Identities=17% Similarity=0.058 Sum_probs=50.4
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhC------ccchheee
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAH------PDKVTGLV 73 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~~------p~rv~~lV 73 (262)
++.|+.+|.|.......+.. -.+....++.+.+..+.+|++ +++|+|+|+||.+|+.++++. |.++.++|
T Consensus 112 g~~Vv~vdYrlape~~~p~~--~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~v 189 (318)
T PRK10162 112 GCTVIGIDYTLSPEARFPQA--IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVL 189 (318)
T ss_pred CCEEEEecCCCCCCCCCCCc--HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheE
Confidence 57899999997544322110 011122344444555567774 899999999999999999864 46788999
Q ss_pred Eeccc
Q 024796 74 LRGIF 78 (262)
Q Consensus 74 l~~~~ 78 (262)
++.+.
T Consensus 190 l~~p~ 194 (318)
T PRK10162 190 LWYGL 194 (318)
T ss_pred EECCc
Confidence 88653
No 86
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.89 E-value=3.6e-07 Score=82.45 Aligned_cols=77 Identities=19% Similarity=0.172 Sum_probs=54.6
Q ss_pred eeEEeecCC-CCCCCCCCCCCCCCChHHHHHHHHHHHHH-------hCCCceEEEEeChhHHHHHHHHHhC---------
Q 024796 3 VQEEALHQR-GAGKSTPHACLDQNTTWDLIDDIEKLRQH-------LEIPEWQVFGGSWGSTLALAYSLAH--------- 65 (262)
Q Consensus 3 ~~~~~~D~r-G~G~S~~~~~~~~~~~~~~~~dl~~l~~~-------l~i~~~~l~GhS~GG~va~~~a~~~--------- 65 (262)
+.++.+|+| |+|.|-........+.+++++|+.++++. ++..+++|+||||||.++..+|.+-
T Consensus 122 ~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~ 201 (462)
T PTZ00472 122 AYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDG 201 (462)
T ss_pred cCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCC
Confidence 578999986 99988542221123445789999888874 3457899999999999998887753
Q ss_pred -ccchheeeEecccc
Q 024796 66 -PDKVTGLVLRGIFL 79 (262)
Q Consensus 66 -p~rv~~lVl~~~~~ 79 (262)
+=.++++++-++..
T Consensus 202 ~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 202 LYINLAGLAVGNGLT 216 (462)
T ss_pred ceeeeEEEEEecccc
Confidence 12467777765543
No 87
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.84 E-value=5.4e-09 Score=93.08 Aligned_cols=74 Identities=16% Similarity=0.087 Sum_probs=54.9
Q ss_pred EEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccc----hheeeEeccc
Q 024796 5 EEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK----VTGLVLRGIF 78 (262)
Q Consensus 5 ~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~r----v~~lVl~~~~ 78 (262)
+...|++|+|.+-+.....+.....+.+.|+++.++.+..+++|+||||||.+++.|+..+|+. |+++|.+++.
T Consensus 123 ~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 123 KEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred ccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCC
Confidence 4467999999987642110112234566667777778889999999999999999999999975 6777777653
No 88
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.82 E-value=2.2e-07 Score=78.16 Aligned_cols=67 Identities=15% Similarity=0.210 Sum_probs=47.6
Q ss_pred hhcccccCCceeEEeeCCCCCCCChhHHHHHh-hCCCCeEEEeCCCCCCC--C----ch--hHHHHHHHHHHHHHHH
Q 024796 190 DNIDNIRHINATIVQGRYDVCCPMMSAWDLHK-AWPEADFKVVADAGHSA--N----EP--GIAAELVATNEKLKNL 257 (262)
Q Consensus 190 ~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~-~~p~~~~~~i~~aGH~~--~----~~--~~~~~~~~~~~~~~~~ 257 (262)
..+.+|. +|+|||+..+|++++....-.... ..|+..+.+-+.+||.. . .+ =..+++++-++.|.+.
T Consensus 268 ~~L~~Ir-~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~~ 343 (345)
T COG0429 268 PLLPKIR-KPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLEA 343 (345)
T ss_pred ccccccc-cceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHhh
Confidence 3678885 899999999999988753322222 56899999999999954 2 22 2345666777777654
No 89
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.81 E-value=6.2e-09 Score=96.19 Aligned_cols=74 Identities=15% Similarity=0.048 Sum_probs=60.2
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-----CceEEEEeChhHHHHHHHHHhCccchheeeEec
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 76 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i-----~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~ 76 (262)
+..|+++|+||||.|..... ... ...++|+.++++.+.. .++.++||||||.+++.+|..+|++++++|...
T Consensus 53 Gy~vv~~D~RG~g~S~g~~~--~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~ 129 (550)
T TIGR00976 53 GYAVVIQDTRGRGASEGEFD--LLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQE 129 (550)
T ss_pred CcEEEEEeccccccCCCceE--ecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecC
Confidence 35799999999999986432 122 3568888888887733 489999999999999999999999999999876
Q ss_pred cc
Q 024796 77 IF 78 (262)
Q Consensus 77 ~~ 78 (262)
+.
T Consensus 130 ~~ 131 (550)
T TIGR00976 130 GV 131 (550)
T ss_pred cc
Confidence 54
No 90
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.81 E-value=4.7e-07 Score=86.33 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=57.8
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC--------------------CCceEEEEeChhHHHHHHH
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE--------------------IPEWQVFGGSWGSTLALAY 61 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~--------------------i~~~~l~GhS~GG~va~~~ 61 (262)
+..|+..|.||+|.|.+... .. ...-.+|..++++.+. -.++.++|.||||.+++..
T Consensus 279 GYaVV~~D~RGtg~SeG~~~--~~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~a 355 (767)
T PRK05371 279 GFAVVYVSGIGTRGSDGCPT--TG-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAV 355 (767)
T ss_pred CeEEEEEcCCCCCCCCCcCc--cC-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHH
Confidence 46799999999999986432 11 1234667777777764 2489999999999999999
Q ss_pred HHhCccchheeeEeccc
Q 024796 62 SLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 62 a~~~p~rv~~lVl~~~~ 78 (262)
|...|+.++++|-..+.
T Consensus 356 Aa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 356 ATTGVEGLETIIPEAAI 372 (767)
T ss_pred HhhCCCcceEEEeeCCC
Confidence 99999999999987654
No 91
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.79 E-value=3.6e-07 Score=79.39 Aligned_cols=75 Identities=16% Similarity=0.198 Sum_probs=51.8
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC----CCceEEEEeChhHHHHHHHHHhCcc---chheeeE
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE----IPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVL 74 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~----i~~~~l~GhS~GG~va~~~a~~~p~---rv~~lVl 74 (262)
..||+.+..||+|.|.-..+ .....-..+|+.++++++. -.+...+|.||||++...|.-.-.+ -+.++.+
T Consensus 154 G~r~VVfN~RG~~g~~LtTp--r~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v 231 (409)
T KOG1838|consen 154 GYRVVVFNHRGLGGSKLTTP--RLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAV 231 (409)
T ss_pred CcEEEEECCCCCCCCccCCC--ceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEE
Confidence 46899999999999863221 1111124677777777754 3478999999999999999876543 3455556
Q ss_pred eccc
Q 024796 75 RGIF 78 (262)
Q Consensus 75 ~~~~ 78 (262)
+.++
T Consensus 232 ~~Pw 235 (409)
T KOG1838|consen 232 CNPW 235 (409)
T ss_pred eccc
Confidence 6654
No 92
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.77 E-value=4.1e-08 Score=76.73 Aligned_cols=44 Identities=16% Similarity=0.276 Sum_probs=36.4
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCCch
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP 241 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~~~ 241 (262)
.+|+++|.+++|+.+|.+.++++++.+ ++++++++++||+-.++
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccccc
Confidence 478899999999999999999998877 89999999999998643
No 93
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.74 E-value=5.8e-08 Score=78.72 Aligned_cols=77 Identities=17% Similarity=0.034 Sum_probs=52.2
Q ss_pred ceeEEeecCCCCCCCCCCCCCC--------CCChHHHHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhCccchhe
Q 024796 2 EVQEEALHQRGAGKSTPHACLD--------QNTTWDLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAHPDKVTG 71 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~--------~~~~~~~~~dl~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~~p~rv~~ 71 (262)
...|+++|.||+|.+....... .....++.+-+..+.+..+++ ++.|+||||||.+++.++.++|+++.+
T Consensus 43 g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~ 122 (212)
T TIGR01840 43 GFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAG 122 (212)
T ss_pred CeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheE
Confidence 3679999999998654311100 001112222233444445554 899999999999999999999999999
Q ss_pred eeEeccc
Q 024796 72 LVLRGIF 78 (262)
Q Consensus 72 lVl~~~~ 78 (262)
++.+++.
T Consensus 123 ~~~~~g~ 129 (212)
T TIGR01840 123 GASNAGL 129 (212)
T ss_pred EEeecCC
Confidence 9877653
No 94
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.73 E-value=4.2e-07 Score=71.93 Aligned_cols=48 Identities=21% Similarity=0.169 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 28 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 28 ~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
....+.++++++...-+.+.|+|.||||+.|..+|.+++ +++ ||++|.
T Consensus 43 ~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPa 90 (187)
T PF05728_consen 43 EEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPA 90 (187)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCC
Confidence 346677888888888777999999999999999999985 333 788775
No 95
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.72 E-value=3e-07 Score=74.79 Aligned_cols=44 Identities=25% Similarity=0.297 Sum_probs=29.1
Q ss_pred cccCCceeEEeeCCCCCCCChhHHHHHhhC----CCCeEEEeCCCCCCC
Q 024796 194 NIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSA 238 (262)
Q Consensus 194 ~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~aGH~~ 238 (262)
++ ++|+++++|+.|+.++.+..+.+.+.+ ...++++|||++|--
T Consensus 143 ~~-~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF 190 (218)
T PF01738_consen 143 KI-KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGF 190 (218)
T ss_dssp G---S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTT
T ss_pred cc-CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccc
Confidence 44 589999999999999887555554444 678999999999943
No 96
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.72 E-value=8.5e-07 Score=77.55 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=49.2
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh---CCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l---~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
+.-++++|.||.|.|.... ..+ +.+.+-..|...+... +-.++.++|.|+||++|.++|..++.|++++|..|+.
T Consensus 218 GiA~LtvDmPG~G~s~~~~-l~~-D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 218 GIAMLTVDMPGQGESPKWP-LTQ-DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAP 295 (411)
T ss_dssp T-EEEEE--TTSGGGTTT--S-S--CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES--
T ss_pred CCEEEEEccCCCcccccCC-CCc-CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCch
Confidence 4568999999999986422 111 2223444444444443 2248899999999999999999999999999999874
No 97
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.71 E-value=1.3e-06 Score=75.06 Aligned_cols=58 Identities=17% Similarity=0.214 Sum_probs=38.3
Q ss_pred cccccCCceeEEeeCCCCCCCChhHHHHHhhCC-CCeEEEeCCCCCCCCchhHHHHHHHH
Q 024796 192 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAAELVAT 250 (262)
Q Consensus 192 l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~aGH~~~~~~~~~~~~~~ 250 (262)
.++| ++|+++-+|-.|.+||+.......+.++ ..++.++|..||....+...++.++.
T Consensus 258 A~ri-~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~~~~~~~~~~ 316 (320)
T PF05448_consen 258 ARRI-KCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPEFQEDKQLNF 316 (320)
T ss_dssp GGG---SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHHHHHHHHHHH
T ss_pred HHHc-CCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhhHHHHHHHHH
Confidence 4567 5999999999999999988777778886 45799999999988644333444443
No 98
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.70 E-value=1.3e-06 Score=74.27 Aligned_cols=72 Identities=24% Similarity=0.279 Sum_probs=62.5
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
..||++-+||+|-|+.+.. ......+.|.-+..|+=+||..++.|=|-.||+.|+-.+|..||++|.++=+.
T Consensus 189 FEVI~PSlPGygwSd~~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred EEEeccCCCCcccCcCCcc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 4799999999999986542 34555567888889999999999999999999999999999999999998774
No 99
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.69 E-value=3.8e-07 Score=70.85 Aligned_cols=62 Identities=18% Similarity=0.267 Sum_probs=43.7
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-----CceEEEEeChhHHHHHHHHHhCcc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLAHPD 67 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i-----~~~~l~GhS~GG~va~~~a~~~p~ 67 (262)
+..+.-+|.||-|+|....+ .-..+ .+|..+.++.++- ..+-|.|.|+||+|++++|.+.|+
T Consensus 60 G~atlRfNfRgVG~S~G~fD--~GiGE--~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 60 GFATLRFNFRGVGRSQGEFD--NGIGE--LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred CceEEeecccccccccCccc--CCcch--HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc
Confidence 35678899999999986432 11223 5555555555532 234588999999999999998875
No 100
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.67 E-value=7.5e-08 Score=90.68 Aligned_cols=65 Identities=18% Similarity=0.121 Sum_probs=49.5
Q ss_pred ceeEEeecCCCCCCCCCC----------CCCCCC-----------ChHHHHHHHHHHHHHhC----------------CC
Q 024796 2 EVQEEALHQRGAGKSTPH----------ACLDQN-----------TTWDLIDDIEKLRQHLE----------------IP 44 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~----------~~~~~~-----------~~~~~~~dl~~l~~~l~----------------i~ 44 (262)
..+||++|+||||+|... .....| ...+.+.|+..++.+++ ..
T Consensus 476 Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~ 555 (792)
T TIGR03502 476 GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGS 555 (792)
T ss_pred CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 468999999999999432 110011 33468999999999887 24
Q ss_pred ceEEEEeChhHHHHHHHHHhCc
Q 024796 45 EWQVFGGSWGSTLALAYSLAHP 66 (262)
Q Consensus 45 ~~~l~GhS~GG~va~~~a~~~p 66 (262)
+++++||||||+++..|+....
T Consensus 556 ~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 556 KVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred cEEEEecCHHHHHHHHHHHhcC
Confidence 7999999999999999997543
No 101
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.62 E-value=1.6e-06 Score=72.77 Aligned_cols=77 Identities=17% Similarity=0.109 Sum_probs=55.6
Q ss_pred ceeEEeecCCCCCCCCCCC----CCCCCChHHHHHHHHHHHHHh------CCCceEEEEeChhHHHHHHHHHhCc---cc
Q 024796 2 EVQEEALHQRGAGKSTPHA----CLDQNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHP---DK 68 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~----~~~~~~~~~~~~dl~~l~~~l------~i~~~~l~GhS~GG~va~~~a~~~p---~r 68 (262)
...|.+..+.||-.++... ....++..+.++...++++.+ .-.+++|+|||+|++++++.+.++| .+
T Consensus 32 ~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~ 111 (266)
T PF10230_consen 32 QFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFR 111 (266)
T ss_pred CCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCc
Confidence 4578999999998776431 112345545555444455443 2347999999999999999999999 89
Q ss_pred hheeeEeccc
Q 024796 69 VTGLVLRGIF 78 (262)
Q Consensus 69 v~~lVl~~~~ 78 (262)
|.+++++-|+
T Consensus 112 V~~~~lLfPT 121 (266)
T PF10230_consen 112 VKKVILLFPT 121 (266)
T ss_pred eeEEEEeCCc
Confidence 9999987554
No 102
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.55 E-value=4.8e-07 Score=72.26 Aligned_cols=75 Identities=21% Similarity=0.235 Sum_probs=49.0
Q ss_pred eeEEeecCCCCCCCCCCCC-CCCCChHH-----HHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEec
Q 024796 3 VQEEALHQRGAGKSTPHAC-LDQNTTWD-----LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 76 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~-~~~~~~~~-----~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~ 76 (262)
..|..+|.||.|+|+++.. ..+++..+ +...|+.+.+.+.-..-.+|||||||-+.-.+. ++| ++.+..+.|
T Consensus 58 f~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG 135 (281)
T COG4757 58 FEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFG 135 (281)
T ss_pred ceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEec
Confidence 4689999999999986431 11233333 344455555555556788999999998755443 666 666666666
Q ss_pred ccc
Q 024796 77 IFL 79 (262)
Q Consensus 77 ~~~ 79 (262)
+.+
T Consensus 136 ~ga 138 (281)
T COG4757 136 SGA 138 (281)
T ss_pred ccc
Confidence 654
No 103
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.53 E-value=2e-07 Score=78.24 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHh--------CCCceEEEEeChhHHHHHHHHHhCc-----cchheeeEecccc
Q 024796 28 WDLIDDIEKLRQHL--------EIPEWQVFGGSWGSTLALAYSLAHP-----DKVTGLVLRGIFL 79 (262)
Q Consensus 28 ~~~~~dl~~l~~~l--------~i~~~~l~GhS~GG~va~~~a~~~p-----~rv~~lVl~~~~~ 79 (262)
..-++||.++++.| +.++++|+|||-|.--++.|+.+.. .+|.+.||-++..
T Consensus 84 ~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 84 DRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp HHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred hhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 34466666666544 3568999999999999999998763 6899999987753
No 104
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.43 E-value=2e-07 Score=75.68 Aligned_cols=48 Identities=19% Similarity=0.246 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHh-CC--CceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 30 LIDDIEKLRQHL-EI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 30 ~~~dl~~l~~~l-~i--~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
+.++..+++... .+ +++.|+|.|.||-+|+.+|+.+| .|+.+|.+.+.
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps 55 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPS 55 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCc
Confidence 344444444443 44 48999999999999999999999 99999987653
No 105
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.41 E-value=1.4e-06 Score=71.15 Aligned_cols=73 Identities=16% Similarity=0.211 Sum_probs=55.5
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC-ceEEEEeChhHHHHHHHHHhC---ccchheeeEeccc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP-EWQVFGGSWGSTLALAYSLAH---PDKVTGLVLRGIF 78 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~-~~~l~GhS~GG~va~~~a~~~---p~rv~~lVl~~~~ 78 (262)
+.|+.++.||++...++ ..+..+++++..+-+....-+ ++.|+|||+||.||++.|.+- -.+|..|+++++.
T Consensus 28 ~~v~~i~~~~~~~~~~~----~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 28 IGVYGIEYPGRGDDEPP----PDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp EEEEEECSTTSCTTSHE----ESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred EEEEEEecCCCCCCCCC----CCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 67999999999844322 246667888876555554444 899999999999999999854 4569999999975
Q ss_pred c
Q 024796 79 L 79 (262)
Q Consensus 79 ~ 79 (262)
+
T Consensus 104 ~ 104 (229)
T PF00975_consen 104 P 104 (229)
T ss_dssp S
T ss_pred C
Confidence 4
No 106
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.32 E-value=2.1e-06 Score=87.15 Aligned_cols=74 Identities=12% Similarity=0.065 Sum_probs=61.7
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC-ceEEEEeChhHHHHHHHHHh---CccchheeeEecc
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP-EWQVFGGSWGSTLALAYSLA---HPDKVTGLVLRGI 77 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~-~~~l~GhS~GG~va~~~a~~---~p~rv~~lVl~~~ 77 (262)
..+|+++|+||||.+... .++..++++++.+.++.+..+ +++++||||||.+|+++|.+ +|++|..++++++
T Consensus 1094 ~~~v~~~~~~g~~~~~~~----~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1094 QWSIYGIQSPRPDGPMQT----ATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CCcEEEEECCCCCCCCCC----CCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 368999999999976322 357778999999988887654 79999999999999999996 5889999999987
Q ss_pred cc
Q 024796 78 FL 79 (262)
Q Consensus 78 ~~ 79 (262)
.+
T Consensus 1170 ~~ 1171 (1296)
T PRK10252 1170 WP 1171 (1296)
T ss_pred CC
Confidence 53
No 107
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.30 E-value=1.7e-05 Score=65.06 Aligned_cols=47 Identities=15% Similarity=0.278 Sum_probs=38.1
Q ss_pred cccccCCceeEEeeCCCCCCCChhHHHHHhhCCCC-eEEEeCCCCCCCC
Q 024796 192 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAGHSAN 239 (262)
Q Consensus 192 l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~-~~~~i~~aGH~~~ 239 (262)
..++ ++|+|+..|--|.+||+.....+.+.++.. ++.++|.-+|.-.
T Consensus 255 A~Ri-K~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~ 302 (321)
T COG3458 255 AARI-KVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG 302 (321)
T ss_pred HHhh-ccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC
Confidence 3456 599999999999999998777777777754 5788888889764
No 108
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.27 E-value=7.5e-06 Score=64.14 Aligned_cols=70 Identities=17% Similarity=0.084 Sum_probs=50.6
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH----hCCCceEEEEeChhHHHHHHHHHhCcc----chheee
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH----LEIPEWQVFGGSWGSTLALAYSLAHPD----KVTGLV 73 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~----l~i~~~~l~GhS~GG~va~~~a~~~p~----rv~~lV 73 (262)
.+.|+.+|-+=|=.|.+ +..+.+.|+.+++++ .+.++++|+|+|+|+-|.-...-+-|+ +|+.++
T Consensus 29 G~~VvGvdsl~Yfw~~r-------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~ 101 (192)
T PF06057_consen 29 GVPVVGVDSLRYFWSER-------TPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVV 101 (192)
T ss_pred CCeEEEechHHHHhhhC-------CHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEE
Confidence 46777777666655543 334567777766655 578899999999999877766666664 788888
Q ss_pred Eeccc
Q 024796 74 LRGIF 78 (262)
Q Consensus 74 l~~~~ 78 (262)
|+++.
T Consensus 102 Ll~p~ 106 (192)
T PF06057_consen 102 LLSPS 106 (192)
T ss_pred EeccC
Confidence 88764
No 109
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.24 E-value=8.9e-06 Score=64.87 Aligned_cols=72 Identities=19% Similarity=0.173 Sum_probs=54.0
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHH-HHHHHhCCCceEEEEeChhHHHHHHHHHh---CccchheeeEeccc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIE-KLRQHLEIPEWQVFGGSWGSTLALAYSLA---HPDKVTGLVLRGIF 78 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~-~l~~~l~i~~~~l~GhS~GG~va~~~a~~---~p~rv~~lVl~~~~ 78 (262)
.+|+++|++|+|.+.... .+...++++.. .+.+..+..+++++||||||.++...+.+ .++++.+++++++.
T Consensus 26 ~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 26 RDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred ccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 579999999999775432 24445555543 44455556689999999999999999886 45779999988764
No 110
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.18 E-value=4.8e-05 Score=64.04 Aligned_cols=72 Identities=15% Similarity=0.103 Sum_probs=51.7
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-----CceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i-----~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
.-|+..|.||+|.|..... .....-++|..++++-+.- .++-++|.|++|+.++..|...|.+++++|...+
T Consensus 58 Y~vV~~D~RG~g~S~G~~~---~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~ 134 (272)
T PF02129_consen 58 YAVVVQDVRGTGGSEGEFD---PMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSG 134 (272)
T ss_dssp -EEEEEE-TTSTTS-S-B----TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE
T ss_pred CEEEEECCcccccCCCccc---cCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEeccc
Confidence 4689999999999986432 1133457776666666522 2788999999999999999999999999998654
No 111
>PRK10115 protease 2; Provisional
Probab=98.17 E-value=0.00011 Score=69.67 Aligned_cols=76 Identities=22% Similarity=0.229 Sum_probs=50.0
Q ss_pred ceeEEeecCCCCCCCCC------CCCCCCCChHHHHHHHHHHHHHhCC---CceEEEEeChhHHHHHHHHHhCccchhee
Q 024796 2 EVQEEALHQRGAGKSTP------HACLDQNTTWDLIDDIEKLRQHLEI---PEWQVFGGSWGSTLALAYSLAHPDKVTGL 72 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~------~~~~~~~~~~~~~~dl~~l~~~l~i---~~~~l~GhS~GG~va~~~a~~~p~rv~~l 72 (262)
+.-|.....||-|.=.+ .......+..++++-++.|++. |. ++..+.|.|.||+++...+.++|++++++
T Consensus 474 G~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~ 552 (686)
T PRK10115 474 GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGV 552 (686)
T ss_pred CcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhheeEE
Confidence 34578888898543221 0111123333444444444444 53 47999999999999999999999999999
Q ss_pred eEeccc
Q 024796 73 VLRGIF 78 (262)
Q Consensus 73 Vl~~~~ 78 (262)
|...+.
T Consensus 553 v~~vp~ 558 (686)
T PRK10115 553 IAQVPF 558 (686)
T ss_pred EecCCc
Confidence 886553
No 112
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.13 E-value=9.7e-06 Score=66.29 Aligned_cols=75 Identities=13% Similarity=0.007 Sum_probs=47.6
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-----CCCceEEEEeChhHHHHHHHHHhCc---cchheeeE
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-----EIPEWQVFGGSWGSTLALAYSLAHP---DKVTGLVL 74 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-----~i~~~~l~GhS~GG~va~~~a~~~p---~rv~~lVl 74 (262)
..++++|.......-...... .....+.+.+..+++.+ +-++++|+||||||.+|..++...+ +.|+.+|.
T Consensus 40 ~d~ft~df~~~~s~~~g~~l~-~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iit 118 (225)
T PF07819_consen 40 FDFFTVDFNEELSAFHGRTLQ-RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIIT 118 (225)
T ss_pred eeEEEeccCccccccccccHH-HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEE
Confidence 456777766643211100000 01112445566666666 5578999999999999998887654 57999998
Q ss_pred eccc
Q 024796 75 RGIF 78 (262)
Q Consensus 75 ~~~~ 78 (262)
++++
T Consensus 119 l~tP 122 (225)
T PF07819_consen 119 LGTP 122 (225)
T ss_pred EcCC
Confidence 8764
No 113
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.06 E-value=1.2e-05 Score=57.48 Aligned_cols=43 Identities=21% Similarity=0.280 Sum_probs=40.7
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCC
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 239 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~ 239 (262)
..|+|+|.|+.|+++|.+.++.+++.+++++++.+++.||...
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVY 76 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCccee
Confidence 3799999999999999999999999999999999999999765
No 114
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.03 E-value=6.5e-05 Score=57.83 Aligned_cols=50 Identities=18% Similarity=0.076 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 28 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 28 ~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
++.++.+++-+... -...+||+||+|+.++..|+.+....|+|..|++++
T Consensus 44 ~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVApp 93 (181)
T COG3545 44 DDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPP 93 (181)
T ss_pred HHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCC
Confidence 34555555555554 234999999999999999999888899999999874
No 115
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.98 E-value=2.3e-05 Score=63.08 Aligned_cols=68 Identities=19% Similarity=0.292 Sum_probs=45.1
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHH----HHHH-----hCCCceEEEEeChhHHHHHHHHHhCccc----
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEK----LRQH-----LEIPEWQVFGGSWGSTLALAYSLAHPDK---- 68 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~----l~~~-----l~i~~~~l~GhS~GG~va~~~a~~~p~r---- 68 (262)
++.|+.+|.|= ++ +....+..+|+.+ +++. .+.++++|+|+|-||.+|+.++....++
T Consensus 29 g~~v~~~~Yrl---~p------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~ 99 (211)
T PF07859_consen 29 GFVVVSIDYRL---AP------EAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPK 99 (211)
T ss_dssp TSEEEEEE------TT------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCH
T ss_pred cEEEEEeeccc---cc------cccccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccc
Confidence 45788888882 21 1222345555544 4444 3346899999999999999999876554
Q ss_pred hheeeEeccc
Q 024796 69 VTGLVLRGIF 78 (262)
Q Consensus 69 v~~lVl~~~~ 78 (262)
+++++++.+.
T Consensus 100 ~~~~~~~~p~ 109 (211)
T PF07859_consen 100 PKGIILISPW 109 (211)
T ss_dssp ESEEEEESCH
T ss_pred hhhhhccccc
Confidence 8889988774
No 116
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.94 E-value=7.6e-05 Score=61.49 Aligned_cols=72 Identities=22% Similarity=0.134 Sum_probs=48.1
Q ss_pred eeEEeecCCC-CCCCCCCCCCC----C-----CChHHHHHHHHHHHHHhC------CCceEEEEeChhHHHHHHHHHhCc
Q 024796 3 VQEEALHQRG-AGKSTPHACLD----Q-----NTTWDLIDDIEKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHP 66 (262)
Q Consensus 3 ~~~~~~D~rG-~G~S~~~~~~~----~-----~~~~~~~~dl~~l~~~l~------i~~~~l~GhS~GG~va~~~a~~~p 66 (262)
.-|+++|+-+ .|.+....... . .+......|+.+.++.|. -.++.++|+||||.+++.++.+.|
T Consensus 55 y~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~ 134 (236)
T COG0412 55 YVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP 134 (236)
T ss_pred cEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC
Confidence 3578888876 44443221100 0 112357788888777773 346999999999999999998888
Q ss_pred cchheeeEe
Q 024796 67 DKVTGLVLR 75 (262)
Q Consensus 67 ~rv~~lVl~ 75 (262)
+|++.|..
T Consensus 135 -~v~a~v~f 142 (236)
T COG0412 135 -EVKAAVAF 142 (236)
T ss_pred -CccEEEEe
Confidence 67666654
No 117
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.92 E-value=3.1e-05 Score=65.49 Aligned_cols=73 Identities=23% Similarity=0.207 Sum_probs=54.9
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHH-HHHHhCC--CceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEK-LRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~-l~~~l~i--~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
..|..+.+||++.|.+.+ .+.++. ..++-+.+ .++.||. +.++|.|||.||+-+...|+.||+ |+++||-.++
T Consensus 269 YsvLGwNhPGFagSTG~P-~p~n~~-nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 269 YSVLGWNHPGFAGSTGLP-YPVNTL-NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred ceeeccCCCCccccCCCC-Ccccch-HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 457889999999998643 223332 33444444 4667776 579999999999999999999995 8899997665
No 118
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.88 E-value=2.4e-05 Score=64.95 Aligned_cols=45 Identities=18% Similarity=0.173 Sum_probs=34.9
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCcc-----chheeeEeccc
Q 024796 34 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIF 78 (262)
Q Consensus 34 l~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~-----rv~~lVl~~~~ 78 (262)
+..|.++.+++++.+|||||||..+..|+..+.. +|+++|.+++.
T Consensus 93 l~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~p 142 (255)
T PF06028_consen 93 LKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGP 142 (255)
T ss_dssp HHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--
T ss_pred HHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccc
Confidence 4555666799999999999999999999998743 78999998764
No 119
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.88 E-value=0.0008 Score=51.12 Aligned_cols=48 Identities=27% Similarity=0.269 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEec
Q 024796 29 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 76 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~ 76 (262)
.+...+.++...+.-.+.++-||||||.++-..|-.--..|.+||+.+
T Consensus 74 ~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clg 121 (213)
T COG3571 74 EYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLG 121 (213)
T ss_pred HHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEec
Confidence 578888889998877789999999999999999887666699999886
No 120
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.86 E-value=0.00053 Score=58.80 Aligned_cols=53 Identities=17% Similarity=0.417 Sum_probs=42.4
Q ss_pred ceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCC----CchhHHHHHHHHHH
Q 024796 199 NATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA----NEPGIAAELVATNE 252 (262)
Q Consensus 199 P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~----~~~~~~~~~~~~~~ 252 (262)
.+.++.+++|..+|......+.+..|++++..+++ ||.. +.....++++++++
T Consensus 291 ~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 291 AIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 56788999999888877778999999999999987 9964 45555666666654
No 121
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.85 E-value=0.00028 Score=67.53 Aligned_cols=77 Identities=21% Similarity=0.197 Sum_probs=51.7
Q ss_pred ceeEEeecCCCCCCCCCC------CCCCCCChHHHHHHHHHHHHHhCC--CceEEEEeChhHHHHHHHHHhCccchhee-
Q 024796 2 EVQEEALHQRGAGKSTPH------ACLDQNTTWDLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGL- 72 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~------~~~~~~~~~~~~~dl~~l~~~l~i--~~~~l~GhS~GG~va~~~a~~~p~rv~~l- 72 (262)
++-|..+|-||-|..... .........+...-+..+++..-+ +++.|.|||.||++++..+...|+++-++
T Consensus 558 g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcg 637 (755)
T KOG2100|consen 558 GFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCG 637 (755)
T ss_pred CeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEE
Confidence 456788999997755321 111122333344444555555444 47999999999999999999999888887
Q ss_pred eEeccc
Q 024796 73 VLRGIF 78 (262)
Q Consensus 73 Vl~~~~ 78 (262)
|.+.+.
T Consensus 638 vavaPV 643 (755)
T KOG2100|consen 638 VAVAPV 643 (755)
T ss_pred EEecce
Confidence 666654
No 122
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.82 E-value=2.7e-05 Score=52.63 Aligned_cols=37 Identities=24% Similarity=0.282 Sum_probs=27.7
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ 39 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~ 39 (262)
...|+++|+||||+|++.... -.+..++++|+..+++
T Consensus 43 G~~V~~~D~rGhG~S~g~rg~-~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 43 GYAVFAYDHRGHGRSEGKRGH-IDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCEEEEECCCcCCCCCCcccc-cCCHHHHHHHHHHHhC
Confidence 457999999999999864331 2344579999988864
No 123
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.80 E-value=0.00063 Score=57.87 Aligned_cols=43 Identities=19% Similarity=0.221 Sum_probs=33.5
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhh----C-CCCeEEEeCCCCCCCC
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKA----W-PEADFKVVADAGHSAN 239 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~----~-p~~~~~~i~~aGH~~~ 239 (262)
++|++|.+|..|.++|......+.+. - .+.++..+++.+|...
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 58999999999999998766555443 2 3567888899999763
No 124
>PRK04940 hypothetical protein; Provisional
Probab=97.79 E-value=0.0024 Score=50.00 Aligned_cols=49 Identities=10% Similarity=0.034 Sum_probs=34.4
Q ss_pred eeEEeeCCCCCCCChhHHHHHhhCCCC-eEEEeCCCCCCC-CchhHHHHHHHHHHHHH
Q 024796 200 ATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAGHSA-NEPGIAAELVATNEKLK 255 (262)
Q Consensus 200 ~Lvi~G~~D~~~~~~~~~~~~~~~p~~-~~~~i~~aGH~~-~~~~~~~~~~~~~~~~~ 255 (262)
.+++..+.|.+.+.+.+. +...++ +.++.+|+.|-. .-+ +.+..+-+|.
T Consensus 127 ~~vllq~gDEvLDyr~a~---~~y~~~y~~~v~~GGdH~f~~fe----~~l~~I~~F~ 177 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTA---EELHPYYEIVWDEEQTHKFKNIS----PHLQRIKAFK 177 (180)
T ss_pred EEEEEeCCCcccCHHHHH---HHhccCceEEEECCCCCCCCCHH----HHHHHHHHHH
Confidence 489999999998876543 445666 899999999954 433 3455555554
No 125
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.79 E-value=5.7e-05 Score=59.54 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=40.0
Q ss_pred hcccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCC
Q 024796 191 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA 238 (262)
Q Consensus 191 ~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~ 238 (262)
.+..+ ++|+||+.|++|...-.++.+.+++....+++..|+|.+|+-
T Consensus 202 ~~~~v-~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~ 248 (270)
T KOG4627|consen 202 EYTDV-TVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYD 248 (270)
T ss_pred HhcCc-eeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhh
Confidence 34566 599999999999866667788899999999999999999974
No 126
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.79 E-value=9.7e-05 Score=61.27 Aligned_cols=74 Identities=16% Similarity=0.133 Sum_probs=55.0
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHH-HHHHhCCCceEEEEeChhHHHHHHHHHh---CccchheeeEeccc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEK-LRQHLEIPEWQVFGGSWGSTLALAYSLA---HPDKVTGLVLRGIF 78 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~-l~~~l~i~~~~l~GhS~GG~va~~~a~~---~p~rv~~lVl~~~~ 78 (262)
.+|+.++-||.|.-... ..+.+++++...+ +++.-.--+++|+|||+||.||++.|.+ .-+.|..|+++++.
T Consensus 27 ~~v~~l~a~g~~~~~~~----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~ 102 (257)
T COG3319 27 LPVYGLQAPGYGAGEQP----FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAV 102 (257)
T ss_pred ceeeccccCcccccccc----cCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccC
Confidence 57899999999864332 2355666666544 4444445589999999999999999985 35689999999987
Q ss_pred cc
Q 024796 79 LL 80 (262)
Q Consensus 79 ~~ 80 (262)
..
T Consensus 103 ~~ 104 (257)
T COG3319 103 PP 104 (257)
T ss_pred CC
Confidence 54
No 127
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.75 E-value=0.0043 Score=55.77 Aligned_cols=37 Identities=32% Similarity=0.404 Sum_probs=33.5
Q ss_pred CCceEEEEeChhHHHHHHHHHhCccchheeeEecccc
Q 024796 43 IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 43 i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
..+.+|+|+.-||.-++.||..+|+.+.-+|+.|+..
T Consensus 139 ~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 139 APKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred CCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 3489999999999999999999999999999987653
No 128
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.68 E-value=6.7e-05 Score=62.15 Aligned_cols=49 Identities=20% Similarity=0.212 Sum_probs=40.1
Q ss_pred HHHHHHHHHHH-hCCC--ceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 30 LIDDIEKLRQH-LEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 30 ~~~dl~~l~~~-l~i~--~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
+.++|...+++ +++. +..|+|+||||+.|+.++++||+.+.+++.+++.
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 56677655544 5553 2699999999999999999999999999998864
No 129
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.65 E-value=0.00024 Score=63.97 Aligned_cols=77 Identities=29% Similarity=0.371 Sum_probs=54.3
Q ss_pred ceeEEeecCCCCCCCCCCCC-----CCCCChHHHHHHHHHHHHHhC--C-----CceEEEEeChhHHHHHHHHHhCccch
Q 024796 2 EVQEEALHQRGAGKSTPHAC-----LDQNTTWDLIDDIEKLRQHLE--I-----PEWQVFGGSWGSTLALAYSLAHPDKV 69 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~-----~~~~~~~~~~~dl~~l~~~l~--i-----~~~~l~GhS~GG~va~~~a~~~p~rv 69 (262)
++-||++.+|-+|+|.|-.. ..-.+.++..+|+..|++++. . .+|+++|-|+||++|..+-++||+.|
T Consensus 59 ~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~ 138 (434)
T PF05577_consen 59 GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLF 138 (434)
T ss_dssp TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-
T ss_pred CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCee
Confidence 35689999999999975321 222466678889888887753 1 27999999999999999999999999
Q ss_pred heeeEeccc
Q 024796 70 TGLVLRGIF 78 (262)
Q Consensus 70 ~~lVl~~~~ 78 (262)
.+.+.++++
T Consensus 139 ~ga~ASSap 147 (434)
T PF05577_consen 139 DGAWASSAP 147 (434)
T ss_dssp SEEEEET--
T ss_pred EEEEeccce
Confidence 999887654
No 130
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.59 E-value=0.00022 Score=60.71 Aligned_cols=59 Identities=19% Similarity=0.192 Sum_probs=43.9
Q ss_pred ceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-----CC--CceEEEEeChhHHHHHHHHHhC
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-----EI--PEWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-----~i--~~~~l~GhS~GG~va~~~a~~~ 65 (262)
++.|+.+..||.|.|.+.. +..+++.|-.+.++.| |+ +.+.+.|||+||.|+.+.+.++
T Consensus 171 ~aNvl~fNYpGVg~S~G~~-----s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 171 GANVLVFNYPGVGSSTGPP-----SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCcEEEECCCccccCCCCC-----CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 4689999999999997643 2356777755555544 33 5799999999999988755444
No 131
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.54 E-value=0.0057 Score=49.85 Aligned_cols=70 Identities=11% Similarity=0.041 Sum_probs=38.5
Q ss_pred ceeEEeecCCCC-CCCCCCCCCCCCChHHHHHHHHHHHHHh---CCCceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 2 EVQEEALHQRGA-GKSTPHACLDQNTTWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 2 ~~~~~~~D~rG~-G~S~~~~~~~~~~~~~~~~dl~~l~~~l---~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
+.+||-||.--| |.|++. ..++++....+|+..+++.| |++++-|+.-|+-|.||+..|.+- .+.-||.+
T Consensus 57 GFhViRyDsl~HvGlSsG~--I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLita 130 (294)
T PF02273_consen 57 GFHVIRYDSLNHVGLSSGD--INEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITA 130 (294)
T ss_dssp T--EEEE---B---------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEE
T ss_pred CeEEEeccccccccCCCCC--hhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEE
Confidence 457899998875 678753 34677767788877766654 889999999999999999999743 47777764
No 132
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.47 E-value=0.00063 Score=60.69 Aligned_cols=48 Identities=17% Similarity=0.201 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHh-CC----CceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 30 LIDDIEKLRQHL-EI----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 30 ~~~dl~~l~~~l-~i----~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
++++|.-.+++. .+ ++..|.|+||||+.|+..+++||+++.+++..++
T Consensus 269 l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sg 321 (411)
T PRK10439 269 VQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSG 321 (411)
T ss_pred HHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEecc
Confidence 667776666653 33 4678999999999999999999999999987765
No 133
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.34 E-value=0.0018 Score=52.49 Aligned_cols=44 Identities=23% Similarity=0.217 Sum_probs=30.9
Q ss_pred cccCCceeEEeeCCCCCCCChhHHHHHhhCCC-CeEEEeCCCCCCCC
Q 024796 194 NIRHINATIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSAN 239 (262)
Q Consensus 194 ~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~aGH~~~ 239 (262)
.| ++|||-|+|++|.+.+.+.++.+.+.+.+ .+++..+ +||.+.
T Consensus 159 ~i-~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP 203 (212)
T PF03959_consen 159 KI-SIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVP 203 (212)
T ss_dssp T----EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS--
T ss_pred cC-CCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCc
Confidence 44 58999999999999998778888888766 7777777 588653
No 134
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.29 E-value=0.013 Score=51.32 Aligned_cols=65 Identities=23% Similarity=0.235 Sum_probs=52.6
Q ss_pred cccccCCceeEEeeCCCCCCCChhHHHHHhhCCCC-eEEEeCCCCCCCCchhHHHHHHHHHHHHHHHHhcC
Q 024796 192 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 261 (262)
Q Consensus 192 l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~-~~~~i~~aGH~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (262)
..++ ++|-+||.|..|....++.+..+-+.+|+- .+..+||++|..-. ..+++.+..|.+.+.+|
T Consensus 258 ~~rL-~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~----~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 258 RDRL-TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG----SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred HHhc-CccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch----HHHHHHHHHHHHHHHcC
Confidence 3556 699999999999987777777788888865 58889999998753 55678888998888776
No 135
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.28 E-value=0.00058 Score=59.32 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=45.9
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCc--cchheeeEeccc
Q 024796 26 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP--DKVTGLVLRGIF 78 (262)
Q Consensus 26 ~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p--~rv~~lVl~~~~ 78 (262)
....+..-|.+++...+.+++.|+||||||.++..|+..++ .+|++++.++++
T Consensus 109 ~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 109 RGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred cHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 33456777888888889999999999999999999999988 899999988764
No 136
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.27 E-value=0.00068 Score=51.83 Aligned_cols=49 Identities=20% Similarity=0.081 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHh----CCCceEEEEeChhHHHHHHHHHhCcc----chheeeEeccc
Q 024796 30 LIDDIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIF 78 (262)
Q Consensus 30 ~~~dl~~l~~~l----~i~~~~l~GhS~GG~va~~~a~~~p~----rv~~lVl~~~~ 78 (262)
+.+.+...++.. .-.+++++||||||.+|..++...+. ++..++-.|++
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 445554444443 56789999999999999999998865 45556655553
No 137
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.19 E-value=0.00093 Score=50.07 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCc
Q 024796 30 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP 66 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p 66 (262)
+.+++.++++...-.++++.|||+||.+|..++....
T Consensus 50 ~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 50 ILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 5566777777777668999999999999999988654
No 138
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.13 E-value=0.0012 Score=53.74 Aligned_cols=48 Identities=19% Similarity=0.160 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 30 LIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
++.-|+.+.++.+|+ ++.+.|+|.||+.+..++..|||++.++.+.+.
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG 130 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSG 130 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecc
Confidence 334455666777776 899999999999999999999999999887654
No 139
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.04 E-value=0.054 Score=46.41 Aligned_cols=41 Identities=17% Similarity=0.024 Sum_probs=31.7
Q ss_pred CceeEEeeCCCCCCCCh--hHHHHHhhCCCCeEEEeCCCCCCC
Q 024796 198 INATIVQGRYDVCCPMM--SAWDLHKAWPEADFKVVADAGHSA 238 (262)
Q Consensus 198 ~P~Lvi~G~~D~~~~~~--~~~~~~~~~p~~~~~~i~~aGH~~ 238 (262)
-|++|++|+.|.+.+.. .++.+.+.-..+++..+++..|..
T Consensus 246 PP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~g~~H~f 288 (312)
T COG0657 246 PPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGMIHGF 288 (312)
T ss_pred CCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeCCcceec
Confidence 49999999999998842 345555555667899999999944
No 140
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.01 E-value=0.0012 Score=53.50 Aligned_cols=43 Identities=21% Similarity=0.187 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheee
Q 024796 29 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV 73 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lV 73 (262)
++.+-|++++++-|- ++.||||||||.++..|..-. .-+.+.+
T Consensus 61 ~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~-~~~d~~~ 103 (219)
T PF01674_consen 61 QLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG-GGADKVV 103 (219)
T ss_dssp HHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC-TGGGTEE
T ss_pred HHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc-CCCCccc
Confidence 355556677777899 999999999999999887644 3334333
No 141
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.01 E-value=0.012 Score=46.81 Aligned_cols=54 Identities=17% Similarity=0.124 Sum_probs=38.7
Q ss_pred CceeEEeeCCCCCCCChhHH----HHHhhCCCCeEEEeCCCCCCCCchhHHHHHHHHHHHHHH
Q 024796 198 INATIVQGRYDVCCPMMSAW----DLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 256 (262)
Q Consensus 198 ~P~Lvi~G~~D~~~~~~~~~----~~~~~~p~~~~~~i~~aGH~~~~~~~~~~~~~~~~~~~~ 256 (262)
.|.+..||+.|+++|.+..+ .++.....+++..|+|-+|..-.++ ++.+..|..
T Consensus 145 ~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e-----~~~~~~~~~ 202 (206)
T KOG2112|consen 145 TPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQE-----LDDLKSWIK 202 (206)
T ss_pred chhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHHH-----HHHHHHHHH
Confidence 69999999999999987543 3334445589999999999874222 555555544
No 142
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.95 E-value=0.002 Score=50.44 Aligned_cols=50 Identities=22% Similarity=0.195 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhCC-----CceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 29 DLIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i-----~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
.-+.+|..|++.|.- .+..++|||+|+.++-..+...+-++..+|++|+.
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 456677777777643 36799999999999988777768899999999874
No 143
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.92 E-value=0.0018 Score=57.47 Aligned_cols=49 Identities=12% Similarity=0.131 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHh---CCCceEEEEeChhHHHHHHHHHhCcc------chheeeEeccc
Q 024796 30 LIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPD------KVTGLVLRGIF 78 (262)
Q Consensus 30 ~~~dl~~l~~~l---~i~~~~l~GhS~GG~va~~~a~~~p~------rv~~lVl~~~~ 78 (262)
+...+..+++.. .-.+++|+||||||.+++.+....+. .|+++|.+++.
T Consensus 102 ~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 102 YFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 344455555443 34689999999999999999988854 59999988764
No 144
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.91 E-value=0.0022 Score=52.80 Aligned_cols=75 Identities=9% Similarity=0.014 Sum_probs=46.2
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH----hCCCceEEEEeChhHHHHHHHHHh----Cc-----cch
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH----LEIPEWQVFGGSWGSTLALAYSLA----HP-----DKV 69 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~----l~i~~~~l~GhS~GG~va~~~a~~----~p-----~rv 69 (262)
..+|.+.-|..|.-.. -..+..+...-..++.++++. .+..+++|++||||+.+.+..... .+ .++
T Consensus 49 ~~~i~FsWPS~g~~~~-Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~ 127 (233)
T PF05990_consen 49 GVVILFSWPSDGSLLG-YFYDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARF 127 (233)
T ss_pred ceEEEEEcCCCCChhh-hhhhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhh
Confidence 3688899998876321 000111111234444444444 467899999999999999987543 22 367
Q ss_pred heeeEeccc
Q 024796 70 TGLVLRGIF 78 (262)
Q Consensus 70 ~~lVl~~~~ 78 (262)
..+||+++-
T Consensus 128 ~~viL~ApD 136 (233)
T PF05990_consen 128 DNVILAAPD 136 (233)
T ss_pred heEEEECCC
Confidence 788887653
No 145
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=96.75 E-value=0.0076 Score=52.49 Aligned_cols=74 Identities=19% Similarity=0.059 Sum_probs=43.2
Q ss_pred eeEEeecCCCCCCCCCCCCCCC---CChHHH---------------HHHHHHHHHHhCC------CceEEEEeChhHHHH
Q 024796 3 VQEEALHQRGAGKSTPHACLDQ---NTTWDL---------------IDDIEKLRQHLEI------PEWQVFGGSWGSTLA 58 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~---~~~~~~---------------~~dl~~l~~~l~i------~~~~l~GhS~GG~va 58 (262)
.-|+++|.+|+|.......... ++...+ +-|....+|.|.- +++.++|+||||..+
T Consensus 161 YVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a 240 (390)
T PF12715_consen 161 YVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRA 240 (390)
T ss_dssp SEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHH
T ss_pred CEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHH
Confidence 4589999999997654332111 111111 2233345565522 478999999999999
Q ss_pred HHHHHhCccchheeeEecc
Q 024796 59 LAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 59 ~~~a~~~p~rv~~lVl~~~ 77 (262)
+.+|..- +||+..|.++.
T Consensus 241 ~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 241 WWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHHH--TT--EEEEES-
T ss_pred HHHHHcc-hhhHhHhhhhh
Confidence 9998664 79988887654
No 146
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.72 E-value=0.0066 Score=48.69 Aligned_cols=61 Identities=13% Similarity=0.174 Sum_probs=44.8
Q ss_pred ccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCC-CchhHHHHHHHHHHHHH
Q 024796 193 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA-NEPGIAAELVATNEKLK 255 (262)
Q Consensus 193 ~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~-~~~~~~~~~~~~~~~~~ 255 (262)
+.| .+|+|-|.|+.|.++|...+..+.+.++++.+..-| +||++ +.....+.+++....|.
T Consensus 160 ~~i-~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 160 RPL-STPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFL 221 (230)
T ss_pred cCC-CCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHH
Confidence 455 599999999999999999899999999999666556 69986 33333334444444443
No 147
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.68 E-value=0.18 Score=43.75 Aligned_cols=57 Identities=25% Similarity=0.131 Sum_probs=39.0
Q ss_pred ceeEEeeCCCCCCCCh--hHHHHHhhCCCCeEEEeCCCCCCC--Cch--hHHHHHHHHHHHHH
Q 024796 199 NATIVQGRYDVCCPMM--SAWDLHKAWPEADFKVVADAGHSA--NEP--GIAAELVATNEKLK 255 (262)
Q Consensus 199 P~Lvi~G~~D~~~~~~--~~~~~~~~~p~~~~~~i~~aGH~~--~~~--~~~~~~~~~~~~~~ 255 (262)
|+||+..+.|...... .++++++.--.+++..++++.|.. ..+ ..+.+.++.+.+|.
T Consensus 270 ~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi 332 (336)
T KOG1515|consen 270 PTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFI 332 (336)
T ss_pred ceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHH
Confidence 6999999999987543 356676666667788899999964 233 24555555555553
No 148
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.65 E-value=0.0048 Score=51.17 Aligned_cols=37 Identities=22% Similarity=0.349 Sum_probs=33.3
Q ss_pred CCCceEEEEeChhHHHHHHHHHhC-----ccchheeeEeccc
Q 024796 42 EIPEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGIF 78 (262)
Q Consensus 42 ~i~~~~l~GhS~GG~va~~~a~~~-----p~rv~~lVl~~~~ 78 (262)
++++..|.|||=||-+|...++.+ +.+++++|++++.
T Consensus 89 D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred cccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 456889999999999999999998 6799999999985
No 149
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.57 E-value=0.0055 Score=50.02 Aligned_cols=43 Identities=19% Similarity=0.135 Sum_probs=31.9
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhC----ccchheeeEecc
Q 024796 34 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH----PDKVTGLVLRGI 77 (262)
Q Consensus 34 l~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~----p~rv~~lVl~~~ 77 (262)
+..+++..+- ++.+.|||.||.+|+..|+.. .+||.+++..++
T Consensus 75 l~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 75 LKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 4444555443 599999999999999998874 357778776655
No 150
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=96.56 E-value=0.00095 Score=58.91 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=26.2
Q ss_pred CCceEEEEeChhHHHHHHHHHhCccchheeeEecccc
Q 024796 43 IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 43 i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
.+++.++|||+||..++..+.+- .+++..|+++++.
T Consensus 227 ~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWM 262 (379)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH--TT--EEEEES---
T ss_pred hhheeeeecCchHHHHHHHHhhc-cCcceEEEeCCcc
Confidence 45789999999999999877555 8999999998853
No 151
>COG0627 Predicted esterase [General function prediction only]
Probab=96.55 E-value=0.0045 Score=53.12 Aligned_cols=53 Identities=21% Similarity=0.185 Sum_probs=39.7
Q ss_pred CChHH-HHHHHHHH-HHHhCCC----ceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 25 NTTWD-LIDDIEKL-RQHLEIP----EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 25 ~~~~~-~~~dl~~l-~~~l~i~----~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
+..++ +.+++-.+ .+++... +-.|+||||||.=|+.+|++||++++.+.-.++
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg 185 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSG 185 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccc
Confidence 44444 67777644 4455532 577889999999999999999999999886544
No 152
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.54 E-value=0.0066 Score=52.60 Aligned_cols=47 Identities=13% Similarity=0.017 Sum_probs=34.1
Q ss_pred HHHHHHHhCC--CceEEEEeChhHHHHHHHHHhCcc--chheeeEeccccc
Q 024796 34 IEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPD--KVTGLVLRGIFLL 80 (262)
Q Consensus 34 l~~l~~~l~i--~~~~l~GhS~GG~va~~~a~~~p~--rv~~lVl~~~~~~ 80 (262)
|..|.+..|+ ++++|||||+||-||-..+..... +|.+++-++|..+
T Consensus 138 l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 138 LSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 3444444444 689999999999999999988877 9999998887653
No 153
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.54 E-value=0.0041 Score=51.41 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=39.0
Q ss_pred HHHHHHHHHHH-hCC--CceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 30 LIDDIEKLRQH-LEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 30 ~~~dl~~l~~~-l~i--~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
+.+++.-+++. +.+ ++-.|+|||+||.+++...+.+|+.+...+++++.
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 44445556665 333 46789999999999999999999999999998874
No 154
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.53 E-value=0.0032 Score=51.41 Aligned_cols=45 Identities=24% Similarity=0.327 Sum_probs=37.8
Q ss_pred HHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCcc-----chheeeEecc
Q 024796 33 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGI 77 (262)
Q Consensus 33 dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~-----rv~~lVl~~~ 77 (262)
-+..|-++.+++++.++||||||.-...|+..|-. .++++|.+++
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~g 174 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAG 174 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecc
Confidence 34567788899999999999999999999998743 6888888765
No 155
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.40 E-value=0.0055 Score=56.23 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=51.0
Q ss_pred eeEEeecCCCCCCCCCCC------CCCCCChHHHHHHHHHHHHHhC---CCceEEEEeChhHHHHHHHHHhCccchheee
Q 024796 3 VQEEALHQRGAGKSTPHA------CLDQNTTWDLIDDIEKLRQHLE---IPEWQVFGGSWGSTLALAYSLAHPDKVTGLV 73 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~------~~~~~~~~~~~~dl~~l~~~l~---i~~~~l~GhS~GG~va~~~a~~~p~rv~~lV 73 (262)
.-|+.+|-||..+-.... ...+-..++.++-+.-|.++.| .+++.|-|||+||++++....+||+-.+-.|
T Consensus 677 y~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAI 756 (867)
T KOG2281|consen 677 YVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAI 756 (867)
T ss_pred eEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEe
Confidence 458999999976532111 0012233456666777788875 4799999999999999999999998775444
Q ss_pred E
Q 024796 74 L 74 (262)
Q Consensus 74 l 74 (262)
-
T Consensus 757 A 757 (867)
T KOG2281|consen 757 A 757 (867)
T ss_pred c
Confidence 3
No 156
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.40 E-value=0.0055 Score=50.13 Aligned_cols=25 Identities=28% Similarity=0.145 Sum_probs=20.7
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCc
Q 024796 42 EIPEWQVFGGSWGSTLALAYSLAHP 66 (262)
Q Consensus 42 ~i~~~~l~GhS~GG~va~~~a~~~p 66 (262)
.-.++.+.||||||.+|..+++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHH
Confidence 3457899999999999999888643
No 157
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.35 E-value=0.0037 Score=50.83 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhCC--CceEEEEeChhHHHHHHHHH
Q 024796 30 LIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSL 63 (262)
Q Consensus 30 ~~~dl~~l~~~l~i--~~~~l~GhS~GG~va~~~a~ 63 (262)
++++|.+.++.... .++.+|||||||.|+..+..
T Consensus 62 L~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 62 LAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 55556666655554 37999999999999974433
No 158
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.29 E-value=0.0097 Score=51.99 Aligned_cols=74 Identities=26% Similarity=0.292 Sum_probs=53.0
Q ss_pred eeEEeecCCCCCCCCCCCCC--------CCCChHHHHHHHHHHHHHhCC------CceEEEEeChhHHHHHHHHHhCccc
Q 024796 3 VQEEALHQRGAGKSTPHACL--------DQNTTWDLIDDIEKLRQHLEI------PEWQVFGGSWGSTLALAYSLAHPDK 68 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~--------~~~~~~~~~~dl~~l~~~l~i------~~~~l~GhS~GG~va~~~a~~~p~r 68 (262)
+=+|..++|=+|+|-|-... .-.+..+.-.|-..++.+|.- .+++.+|-|+||++|..+=++||.-
T Consensus 112 AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi 191 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI 191 (492)
T ss_pred ceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhh
Confidence 45899999999999652211 012334445565566666532 3689999999999999999999999
Q ss_pred hheeeEec
Q 024796 69 VTGLVLRG 76 (262)
Q Consensus 69 v~~lVl~~ 76 (262)
|.|..-.+
T Consensus 192 v~GAlAaS 199 (492)
T KOG2183|consen 192 VLGALAAS 199 (492)
T ss_pred hhhhhhcc
Confidence 88876543
No 159
>COG4099 Predicted peptidase [General function prediction only]
Probab=96.26 E-value=0.0078 Score=50.42 Aligned_cols=42 Identities=24% Similarity=0.114 Sum_probs=37.7
Q ss_pred HHHHHhCCC--ceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 36 KLRQHLEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 36 ~l~~~l~i~--~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
.+.++.+|+ ++.++|.|+||+-++.++.++|+.+.+.++++.
T Consensus 259 vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 259 VLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred HHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 466777886 799999999999999999999999999999865
No 160
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.22 E-value=0.0027 Score=59.44 Aligned_cols=28 Identities=29% Similarity=0.283 Sum_probs=20.4
Q ss_pred ceEEEEeChhHHHHHHHHHhCccchheee
Q 024796 45 EWQVFGGSWGSTLALAYSLAHPDKVTGLV 73 (262)
Q Consensus 45 ~~~l~GhS~GG~va~~~a~~~p~rv~~lV 73 (262)
.++|+||||||+||+..+ .+|..+.+.|
T Consensus 183 sVILVGHSMGGiVAra~~-tlkn~~~~sV 210 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATL-TLKNEVQGSV 210 (973)
T ss_pred eEEEEeccchhHHHHHHH-hhhhhccchh
Confidence 389999999999999776 4444444433
No 161
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.19 E-value=0.22 Score=41.32 Aligned_cols=54 Identities=20% Similarity=0.440 Sum_probs=41.0
Q ss_pred eeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCC----CchhHHHHHHHHHHHH
Q 024796 200 ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA----NEPGIAAELVATNEKL 254 (262)
Q Consensus 200 ~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~----~~~~~~~~~~~~~~~~ 254 (262)
+.++..++|.-+|-.....+.+..|++++..++ +||.. +.+....+++|-++..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhh
Confidence 356688999988887778888999999999998 89965 3455566666665544
No 162
>COG3150 Predicted esterase [General function prediction only]
Probab=96.10 E-value=0.012 Score=45.12 Aligned_cols=66 Identities=23% Similarity=0.203 Sum_probs=51.3
Q ss_pred eEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeE
Q 024796 4 QEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 74 (262)
Q Consensus 4 ~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl 74 (262)
|.+..|.|-++.|.+.. ..++...++.|+.++..++-++..|+|-|+||+.|-.++-++ .++++++
T Consensus 22 q~~~~~~~~i~y~~p~l---~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~--Girav~~ 87 (191)
T COG3150 22 QFIDEDVRDIEYSTPHL---PHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLC--GIRAVVF 87 (191)
T ss_pred HHHhccccceeeecCCC---CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHh--CChhhhc
Confidence 44566777788876543 346667899999999999988899999999999999999886 3444433
No 163
>PLN00413 triacylglycerol lipase
Probab=96.01 E-value=0.02 Score=51.34 Aligned_cols=35 Identities=14% Similarity=0.368 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHH
Q 024796 29 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 63 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~ 63 (262)
++.+.+.++++...-.++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45667777887776678999999999999998875
No 164
>PLN02162 triacylglycerol lipase
Probab=96.01 E-value=0.017 Score=51.64 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHH
Q 024796 30 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 63 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~ 63 (262)
+.+++..+++...-.++++.|||+||.+|..+|.
T Consensus 264 I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3445555565555558999999999999998764
No 165
>PLN02571 triacylglycerol lipase
Probab=95.97 E-value=0.012 Score=51.99 Aligned_cols=36 Identities=17% Similarity=0.348 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHh
Q 024796 29 DLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLA 64 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~ 64 (262)
++.++|..+++...-+ ++++.||||||.+|...|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4667777777776433 58999999999999998875
No 166
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=95.90 E-value=0.12 Score=45.78 Aligned_cols=49 Identities=14% Similarity=0.145 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCcc---chheeeEecccc
Q 024796 31 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFL 79 (262)
Q Consensus 31 ~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~---rv~~lVl~~~~~ 79 (262)
-.-|+-+++.-|.++.+.+|||-|+.+....++..|+ +|+..++++|..
T Consensus 148 PA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 148 PAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 3334555555688899999999999999999998876 899999888754
No 167
>PLN02454 triacylglycerol lipase
Probab=95.86 E-value=0.016 Score=51.12 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhCCCc--eEEEEeChhHHHHHHHHHh
Q 024796 30 LIDDIEKLRQHLEIPE--WQVFGGSWGSTLALAYSLA 64 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~~--~~l~GhS~GG~va~~~a~~ 64 (262)
+...|.++++...-++ +++.||||||.+|...|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444555555554443 8999999999999999864
No 168
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.73 E-value=0.029 Score=49.96 Aligned_cols=79 Identities=14% Similarity=0.087 Sum_probs=50.6
Q ss_pred ceeEEeecCC-CCCCCCCCCCC-CCCChHHHHHHHHHHHHHh-------CCCceEEEEeChhHHHHHHHHHh----C---
Q 024796 2 EVQEEALHQR-GAGKSTPHACL-DQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLA----H--- 65 (262)
Q Consensus 2 ~~~~~~~D~r-G~G~S~~~~~~-~~~~~~~~~~dl~~l~~~l-------~i~~~~l~GhS~GG~va~~~a~~----~--- 65 (262)
.+.++.+|+| |.|.|-..... ...+..+.++|+.++++.+ .-.+++|.|-|+||..+-.+|.+ .
T Consensus 85 ~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~ 164 (415)
T PF00450_consen 85 FANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKG 164 (415)
T ss_dssp TSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC-
T ss_pred ccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccc
Confidence 4679999977 99999543221 1224556888887777664 33479999999999877666553 2
Q ss_pred ---ccchheeeEeccccc
Q 024796 66 ---PDKVTGLVLRGIFLL 80 (262)
Q Consensus 66 ---p~rv~~lVl~~~~~~ 80 (262)
+=.+++++|-++...
T Consensus 165 ~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 165 DQPKINLKGIAIGNGWID 182 (415)
T ss_dssp -STTSEEEEEEEESE-SB
T ss_pred cccccccccceecCcccc
Confidence 335778888766543
No 169
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=95.72 E-value=0.051 Score=43.81 Aligned_cols=49 Identities=18% Similarity=0.209 Sum_probs=36.0
Q ss_pred hhhcccccCCceeEEeeCCCCCCCChhH---HHHHhhCCC--CeEEEeCCCCC-CC
Q 024796 189 LDNIDNIRHINATIVQGRYDVCCPMMSA---WDLHKAWPE--ADFKVVADAGH-SA 238 (262)
Q Consensus 189 ~~~l~~i~~~P~Lvi~G~~D~~~~~~~~---~~~~~~~p~--~~~~~i~~aGH-~~ 238 (262)
.+.+.++ ++|+|++.|+.|..+|+..- ++..+..|. +++.+|+|.|| |+
T Consensus 157 ~~D~~~v-k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 157 SADIANV-KAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred hhHHhcC-CCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 3456777 48999999999999998643 333333443 46999999999 55
No 170
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.66 E-value=0.038 Score=49.49 Aligned_cols=77 Identities=21% Similarity=0.350 Sum_probs=61.1
Q ss_pred ceeEEeecCCCCCCCCCCCCCCC-----CChHHHHHHHHHHHHHhCC-----C--ceEEEEeChhHHHHHHHHHhCccch
Q 024796 2 EVQEEALHQRGAGKSTPHACLDQ-----NTTWDLIDDIEKLRQHLEI-----P--EWQVFGGSWGSTLALAYSLAHPDKV 69 (262)
Q Consensus 2 ~~~~~~~D~rG~G~S~~~~~~~~-----~~~~~~~~dl~~l~~~l~i-----~--~~~l~GhS~GG~va~~~a~~~p~rv 69 (262)
.+-|+..++|=+|+|.+..+... .+..+...||..++++++. + +|+.+|-|+-|.++..+=.+|||.|
T Consensus 118 gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~ 197 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELT 197 (514)
T ss_pred CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhh
Confidence 35789999999999976433211 2445678899999988754 2 8999999999999999999999999
Q ss_pred heeeEeccc
Q 024796 70 TGLVLRGIF 78 (262)
Q Consensus 70 ~~lVl~~~~ 78 (262)
.+-|-++++
T Consensus 198 ~GsvASSap 206 (514)
T KOG2182|consen 198 VGSVASSAP 206 (514)
T ss_pred eeecccccc
Confidence 998876543
No 171
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.57 E-value=0.035 Score=46.34 Aligned_cols=68 Identities=22% Similarity=0.283 Sum_probs=48.4
Q ss_pred hhhcccccCCceeEEeeCCCCCCCChhHHHHHhhCCC--CeEEEeCCCCCCCCc--hhHHHHHHHHHHHHHH
Q 024796 189 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE--ADFKVVADAGHSANE--PGIAAELVATNEKLKN 256 (262)
Q Consensus 189 ~~~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~aGH~~~~--~~~~~~~~~~~~~~~~ 256 (262)
...+.++..+|+|+++|+.|..+|...+..+.+..++ .+..++++++|.... .....+.++.+.+|..
T Consensus 224 ~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~ 295 (299)
T COG1073 224 FDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLE 295 (299)
T ss_pred hhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHH
Confidence 3445566337999999999999998887777776655 578888999997642 3333456666666654
No 172
>PLN02408 phospholipase A1
Probab=95.49 E-value=0.026 Score=49.24 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhCc
Q 024796 30 LIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAHP 66 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~~p 66 (262)
+.++|.++++...-+ ++++.|||+||.+|...|....
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 455566677666543 4899999999999999887543
No 173
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.47 E-value=0.055 Score=46.69 Aligned_cols=76 Identities=18% Similarity=0.182 Sum_probs=47.5
Q ss_pred eeEEeecCC-CCCCCCCCCCCCCCChHHHHHHHHHHHHHh-------CCCceEEEEeChhHHHHHHHHHhC---------
Q 024796 3 VQEEALHQR-GAGKSTPHACLDQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLAH--------- 65 (262)
Q Consensus 3 ~~~~~~D~r-G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-------~i~~~~l~GhS~GG~va~~~a~~~--------- 65 (262)
+.++.+|+| |.|.|-...+....+....++|+..+++.+ .-.+++|.|-|.||..+-.+|..-
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 578999999 999985322111112223457776655542 234799999999998777666532
Q ss_pred -ccchheeeEeccc
Q 024796 66 -PDKVTGLVLRGIF 78 (262)
Q Consensus 66 -p~rv~~lVl~~~~ 78 (262)
+=.++|+++-++.
T Consensus 82 ~~inLkGi~IGNg~ 95 (319)
T PLN02213 82 PPINLQGYMLGNPV 95 (319)
T ss_pred CceeeeEEEeCCCC
Confidence 1156677765553
No 174
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.43 E-value=0.06 Score=45.24 Aligned_cols=48 Identities=23% Similarity=0.135 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 30 LIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
+.+-+..+....+|+ ++.+.|.|-||..+..+++.+|+...++.++..
T Consensus 128 lr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg 177 (312)
T COG3509 128 LRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAG 177 (312)
T ss_pred HHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeec
Confidence 445556677777887 899999999999999999999999999988754
No 175
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.39 E-value=0.57 Score=37.85 Aligned_cols=34 Identities=18% Similarity=0.084 Sum_probs=24.0
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCccchheee-Eecc
Q 024796 42 EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV-LRGI 77 (262)
Q Consensus 42 ~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lV-l~~~ 77 (262)
+-+.++||+||||=.+|-.+....| +++-| +.|+
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT 89 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGT 89 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECC
Confidence 4568999999999999988765443 44444 4444
No 176
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=95.28 E-value=0.026 Score=46.61 Aligned_cols=38 Identities=21% Similarity=0.208 Sum_probs=31.0
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCc--cchheeeEecccc
Q 024796 42 EIPEWQVFGGSWGSTLALAYSLAHP--DKVTGLVLRGIFL 79 (262)
Q Consensus 42 ~i~~~~l~GhS~GG~va~~~a~~~p--~rv~~lVl~~~~~ 79 (262)
++++..++|||+||-.|..+|+.|. -.+++||-+++..
T Consensus 118 nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 118 NLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred ccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 4568999999999999999999884 3677777777654
No 177
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.12 E-value=0.055 Score=42.58 Aligned_cols=48 Identities=19% Similarity=0.110 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHh------CccchheeeEeccc
Q 024796 31 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA------HPDKVTGLVLRGIF 78 (262)
Q Consensus 31 ~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~------~p~rv~~lVl~~~~ 78 (262)
.+.|.+....---.+++|+|+|.|+.|+...+.. ..++|.++||+|-.
T Consensus 68 ~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 68 VRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp HHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred HHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 3334444444444589999999999999999877 45788899998753
No 178
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.04 E-value=0.051 Score=46.90 Aligned_cols=48 Identities=17% Similarity=0.173 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHh--------CccchheeeEecc
Q 024796 30 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA--------HPDKVTGLVLRGI 77 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~--------~p~rv~~lVl~~~ 77 (262)
+..-|..|.+....++++|++||||..+.++...+ -+.+++-+||..+
T Consensus 177 Le~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaP 232 (377)
T COG4782 177 LERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAP 232 (377)
T ss_pred HHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCC
Confidence 33444445555567899999999999999877543 3456777777654
No 179
>PLN02934 triacylglycerol lipase
Probab=95.04 E-value=0.04 Score=49.78 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHH
Q 024796 29 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 63 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~ 63 (262)
.+...+..+++...-.++++.|||+||.+|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 35666777888776678999999999999999874
No 180
>PLN02310 triacylglycerol lipase
Probab=94.99 E-value=0.04 Score=48.63 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhC---C-CceEEEEeChhHHHHHHHHHh
Q 024796 29 DLIDDIEKLRQHLE---I-PEWQVFGGSWGSTLALAYSLA 64 (262)
Q Consensus 29 ~~~~dl~~l~~~l~---i-~~~~l~GhS~GG~va~~~a~~ 64 (262)
++.+.|.++++.+. - -++++.|||+||.+|...|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 35566777777653 2 268999999999999988854
No 181
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.76 E-value=0.049 Score=47.22 Aligned_cols=39 Identities=21% Similarity=0.224 Sum_probs=31.9
Q ss_pred hCCCceEEEEeChhHHHHHHHHHhCccc-----hheeeEecccc
Q 024796 41 LEIPEWQVFGGSWGSTLALAYSLAHPDK-----VTGLVLRGIFL 79 (262)
Q Consensus 41 l~i~~~~l~GhS~GG~va~~~a~~~p~r-----v~~lVl~~~~~ 79 (262)
+|-.+++|+|||+|+.+...+...-+++ |..++|+|.+.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 4777899999999999999887766655 88888988643
No 182
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.71 E-value=0.12 Score=47.44 Aligned_cols=70 Identities=16% Similarity=0.265 Sum_probs=54.2
Q ss_pred hcccccCCceeEEeeCCCCCCCChhHHHHHhhC-CCCeEEEeCCCCCCCC------------chhHHHHHHHHHHHHHHH
Q 024796 191 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADAGHSAN------------EPGIAAELVATNEKLKNL 257 (262)
Q Consensus 191 ~l~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~aGH~~~------------~~~~~~~~~~~~~~~~~~ 257 (262)
.+-++ ..|+|++.|..|..|+...-+.++..+ ...+++++.+++|..- +.+....+++++.+|.++
T Consensus 299 ~Lldm-k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~ 377 (784)
T KOG3253|consen 299 ALLDM-KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTI 377 (784)
T ss_pred hhHhc-CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHH
Confidence 45566 489999999999999987767776665 5678999999999752 224556677888999988
Q ss_pred HhcC
Q 024796 258 IKNG 261 (262)
Q Consensus 258 ~~~~ 261 (262)
.+|-
T Consensus 378 ~l~c 381 (784)
T KOG3253|consen 378 ALNC 381 (784)
T ss_pred hhcC
Confidence 8764
No 183
>PLN02753 triacylglycerol lipase
Probab=94.68 E-value=0.055 Score=49.13 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhCC-----CceEEEEeChhHHHHHHHHHh
Q 024796 30 LIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLA 64 (262)
Q Consensus 30 ~~~dl~~l~~~l~i-----~~~~l~GhS~GG~va~~~a~~ 64 (262)
+.+.|..+++.... -++++.|||+||.+|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 45556667766543 379999999999999998863
No 184
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=94.68 E-value=0.076 Score=48.79 Aligned_cols=75 Identities=13% Similarity=-0.022 Sum_probs=52.1
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC--CceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i--~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
.-||..|.||.|.|.+........-.+-.-|+.+.+.+.-- .++..+|-|++|+..+..|...|.-++.++-..+
T Consensus 81 YavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~ 157 (563)
T COG2936 81 YAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEG 157 (563)
T ss_pred eEEEEecccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccc
Confidence 45889999999999865321111111223445555444321 3789999999999999999999999988886544
No 185
>PLN02324 triacylglycerol lipase
Probab=94.66 E-value=0.06 Score=47.62 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHh
Q 024796 30 LIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLA 64 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~ 64 (262)
+.++|.++++...-+ ++++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 555667777765432 58999999999999998864
No 186
>PLN02802 triacylglycerol lipase
Probab=94.66 E-value=0.056 Score=48.86 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhC
Q 024796 30 LIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~~ 65 (262)
+.++|..+++...-+ +++|.|||+||.+|...|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 455566666665322 689999999999999888753
No 187
>KOG3101 consensus Esterase D [General function prediction only]
Probab=94.62 E-value=0.0045 Score=49.26 Aligned_cols=53 Identities=23% Similarity=0.336 Sum_probs=38.5
Q ss_pred CChHH-HHHHHHHHHHH----hCCCceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 25 NTTWD-LIDDIEKLRQH----LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 25 ~~~~~-~~~dl~~l~~~----l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
|.+.+ +++.+-++++. +...+..|.||||||.=|+..+++.|.+.+++-...+
T Consensus 117 yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 117 YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred hhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 44444 45666666663 2334789999999999999999999998888665433
No 188
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.44 E-value=0.065 Score=48.60 Aligned_cols=35 Identities=20% Similarity=0.397 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhC---C-CceEEEEeChhHHHHHHHHHh
Q 024796 30 LIDDIEKLRQHLE---I-PEWQVFGGSWGSTLALAYSLA 64 (262)
Q Consensus 30 ~~~dl~~l~~~l~---i-~~~~l~GhS~GG~va~~~a~~ 64 (262)
+.++|.++++.+. - -+++|.|||+||.+|...|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 5566777777653 2 268999999999999988864
No 189
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=94.41 E-value=0.044 Score=45.14 Aligned_cols=58 Identities=9% Similarity=-0.008 Sum_probs=46.3
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhC----CCCeEEEeCCCCCCCCchhHHHHHHHHHHHH
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKL 254 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~aGH~~~~~~~~~~~~~~~~~~ 254 (262)
.+|-|.++++.|.+++.+..++..+.. -+++...+++++|..|.-..++++.+++.+|
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~f 239 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEF 239 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhh
Confidence 479999999999999987544444332 3478899999999998777788899988877
No 190
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.36 E-value=0.062 Score=47.93 Aligned_cols=38 Identities=13% Similarity=0.017 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccc
Q 024796 31 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK 68 (262)
Q Consensus 31 ~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~r 68 (262)
..-|+...+.-|-.+++|++|||||.+.+.+...+++.
T Consensus 169 K~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~ 206 (473)
T KOG2369|consen 169 KKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAE 206 (473)
T ss_pred HHHHHHHHHHcCCCceEEEecCCccHHHHHHHhccccc
Confidence 33344444444668999999999999999999998873
No 191
>PLN02719 triacylglycerol lipase
Probab=94.33 E-value=0.073 Score=48.19 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCC-----CceEEEEeChhHHHHHHHHHh
Q 024796 30 LIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLA 64 (262)
Q Consensus 30 ~~~dl~~l~~~l~i-----~~~~l~GhS~GG~va~~~a~~ 64 (262)
+...|..+++...- -++++.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44555666665532 268999999999999998864
No 192
>PLN02761 lipase class 3 family protein
Probab=94.31 E-value=0.074 Score=48.26 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhC-----C-CceEEEEeChhHHHHHHHHH
Q 024796 29 DLIDDIEKLRQHLE-----I-PEWQVFGGSWGSTLALAYSL 63 (262)
Q Consensus 29 ~~~~dl~~l~~~l~-----i-~~~~l~GhS~GG~va~~~a~ 63 (262)
++.+.|..+++..+ - -++++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 35666777777662 1 26999999999999998885
No 193
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.02 E-value=0.036 Score=46.62 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=27.6
Q ss_pred ceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 45 EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 45 ~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
.-+|.|.|+||.+++..+++||+++-.++.-++
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sp 210 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSG 210 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCC
Confidence 348999999999999999999999966555443
No 194
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=93.57 E-value=0.07 Score=46.27 Aligned_cols=52 Identities=17% Similarity=0.135 Sum_probs=39.1
Q ss_pred hcccccCCceeEEeeCCCCCCCCh-hHHHHHhhCCCC--eEEEeCCCCCCC-CchhH
Q 024796 191 NIDNIRHINATIVQGRYDVCCPMM-SAWDLHKAWPEA--DFKVVADAGHSA-NEPGI 243 (262)
Q Consensus 191 ~l~~i~~~P~Lvi~G~~D~~~~~~-~~~~~~~~~p~~--~~~~i~~aGH~~-~~~~~ 243 (262)
.+.++ ++|++++.|..|...|.. ........+|+. .+.++|++.|+. .+.+.
T Consensus 246 gl~~v-~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~ 301 (365)
T COG4188 246 GLVKV-TDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCK 301 (365)
T ss_pred cceee-ecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCc
Confidence 56777 599999999999977764 234455667877 689999999986 44443
No 195
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=93.56 E-value=0.11 Score=47.99 Aligned_cols=48 Identities=10% Similarity=0.013 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHh----CCCceEEEEeChhHHHHHHHHHhCc---------------cchheeeEecc
Q 024796 30 LIDDIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHP---------------DKVTGLVLRGI 77 (262)
Q Consensus 30 ~~~dl~~l~~~l----~i~~~~l~GhS~GG~va~~~a~~~p---------------~rv~~lVl~~~ 77 (262)
+-..+..+++.. +-.+++|+||||||.+++.+...-. ..|++.|.+++
T Consensus 195 YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iag 261 (642)
T PLN02517 195 TLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGG 261 (642)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccc
Confidence 334444444432 3468999999999999999876321 25677777654
No 196
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=93.44 E-value=0.21 Score=42.93 Aligned_cols=43 Identities=21% Similarity=0.227 Sum_probs=35.3
Q ss_pred HHHHhCCCceEEEEeChhHHHHHHHHHhCc-cchheeeEecccc
Q 024796 37 LRQHLEIPEWQVFGGSWGSTLALAYSLAHP-DKVTGLVLRGIFL 79 (262)
Q Consensus 37 l~~~l~i~~~~l~GhS~GG~va~~~a~~~p-~rv~~lVl~~~~~ 79 (262)
+.+..+..+.+|+||+.|+..+..|....+ ..+.+||++++..
T Consensus 186 ~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 186 FAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 334446566999999999999999999886 4699999999854
No 197
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=93.39 E-value=0.085 Score=42.55 Aligned_cols=51 Identities=20% Similarity=0.313 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhCC-C---ceEEEEeChhHHHHHHHHH--hCccchheeeEeccc
Q 024796 28 WDLIDDIEKLRQHLEI-P---EWQVFGGSWGSTLALAYSL--AHPDKVTGLVLRGIF 78 (262)
Q Consensus 28 ~~~~~dl~~l~~~l~i-~---~~~l~GhS~GG~va~~~a~--~~p~rv~~lVl~~~~ 78 (262)
.+-++|+..+++|++. + +++|+|||-|.-=.+.|.. ..|..|+..|+-.+.
T Consensus 87 k~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 87 KDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred cccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 3458999999999864 2 7999999999998888873 346677777776554
No 198
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=93.35 E-value=0.24 Score=45.27 Aligned_cols=74 Identities=15% Similarity=0.027 Sum_probs=45.2
Q ss_pred eeEEeecCC----CCCCCCCCCCCCCC-ChHHHHHH---HHHHHHHhCCC--ceEEEEeChhHHHHHHHHHh--Cccchh
Q 024796 3 VQEEALHQR----GAGKSTPHACLDQN-TTWDLIDD---IEKLRQHLEIP--EWQVFGGSWGSTLALAYSLA--HPDKVT 70 (262)
Q Consensus 3 ~~~~~~D~r----G~G~S~~~~~~~~~-~~~~~~~d---l~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~--~p~rv~ 70 (262)
+-|+.++.| |++.+.... ...+ -..+...- |.+-++.+|.+ +++|+|+|.||..+..++.. .+..++
T Consensus 126 ~~vv~~~yRlg~~g~~~~~~~~-~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~ 204 (493)
T cd00312 126 VIVVSINYRLGVLGFLSTGDIE-LPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFH 204 (493)
T ss_pred EEEEEecccccccccccCCCCC-CCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHH
Confidence 678888888 343332111 1111 12222222 33334556654 89999999999999888775 345788
Q ss_pred eeeEecc
Q 024796 71 GLVLRGI 77 (262)
Q Consensus 71 ~lVl~~~ 77 (262)
++|+.++
T Consensus 205 ~~i~~sg 211 (493)
T cd00312 205 RAISQSG 211 (493)
T ss_pred HHhhhcC
Confidence 8888654
No 199
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.95 E-value=0.17 Score=43.97 Aligned_cols=36 Identities=25% Similarity=0.192 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHh
Q 024796 29 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 64 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~ 64 (262)
.+.+++..+++...--++.+-|||+||.+|...|..
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 477888888888886689999999999999988763
No 200
>PLN02847 triacylglycerol lipase
Probab=92.52 E-value=0.2 Score=46.27 Aligned_cols=21 Identities=19% Similarity=0.197 Sum_probs=18.4
Q ss_pred CceEEEEeChhHHHHHHHHHh
Q 024796 44 PEWQVFGGSWGSTLALAYSLA 64 (262)
Q Consensus 44 ~~~~l~GhS~GG~va~~~a~~ 64 (262)
-+++|+|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 478999999999999988774
No 201
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=92.36 E-value=0.23 Score=43.58 Aligned_cols=59 Identities=15% Similarity=0.048 Sum_probs=41.1
Q ss_pred CceeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH----hCCCceEEEEeChhHHHHHHHHHhCc
Q 024796 1 MEVQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH----LEIPEWQVFGGSWGSTLALAYSLAHP 66 (262)
Q Consensus 1 ~~~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~----l~i~~~~l~GhS~GG~va~~~a~~~p 66 (262)
+.|+||-+|-.=|=-|.+ +...+++|+.+++++ .|..++.|+|+|+|+-|--..--+-|
T Consensus 286 ~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 286 QGVPVVGVDSLRYFWSER-------TPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred CCCceeeeehhhhhhccC-------CHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 467788888655545543 445788898888766 57789999999999987543333333
No 202
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=91.97 E-value=5.3 Score=31.76 Aligned_cols=48 Identities=23% Similarity=0.254 Sum_probs=35.5
Q ss_pred hcccccCCceeEEeeCCCCCCCChh---HHHHHhhCCC--CeEEEeCCCCCCC
Q 024796 191 NIDNIRHINATIVQGRYDVCCPMMS---AWDLHKAWPE--ADFKVVADAGHSA 238 (262)
Q Consensus 191 ~l~~i~~~P~Lvi~G~~D~~~~~~~---~~~~~~~~p~--~~~~~i~~aGH~~ 238 (262)
+...|++++.|-|-|+.|.++...+ +..+...+|. ..-++.|||||+-
T Consensus 128 dp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYG 180 (202)
T PF06850_consen 128 DPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYG 180 (202)
T ss_pred chHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeee
Confidence 3455656788889999999998754 4556566664 3577789999985
No 203
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=91.56 E-value=0.074 Score=45.07 Aligned_cols=46 Identities=24% Similarity=0.434 Sum_probs=34.0
Q ss_pred HHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEecccc
Q 024796 33 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 33 dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
|++.+-+.|.-.++.++|||+||..+......+ .+.+.-|+.+.+.
T Consensus 230 ~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~WM 275 (399)
T KOG3847|consen 230 DLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDAWM 275 (399)
T ss_pred cHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeeeee
Confidence 455666667777899999999999998766554 5677777777653
No 204
>PLN02633 palmitoyl protein thioesterase family protein
Probab=91.49 E-value=0.47 Score=40.42 Aligned_cols=34 Identities=15% Similarity=0.046 Sum_probs=30.6
Q ss_pred ceEEEEeChhHHHHHHHHHhCcc--chheeeEeccc
Q 024796 45 EWQVFGGSWGSTLALAYSLAHPD--KVTGLVLRGIF 78 (262)
Q Consensus 45 ~~~l~GhS~GG~va~~~a~~~p~--rv~~lVl~~~~ 78 (262)
-++++|+|-||.++..++.+.|+ .|+.+|-+|+.
T Consensus 95 G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 58999999999999999999998 59999987653
No 205
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=91.44 E-value=0.4 Score=43.34 Aligned_cols=74 Identities=12% Similarity=0.079 Sum_probs=47.8
Q ss_pred eeEEeec-CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-------C--CCceEEEEeChhHHHHHHHHHhCcc---ch
Q 024796 3 VQEEALH-QRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-------E--IPEWQVFGGSWGSTLALAYSLAHPD---KV 69 (262)
Q Consensus 3 ~~~~~~D-~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-------~--i~~~~l~GhS~GG~va~~~a~~~p~---rv 69 (262)
..+|.+| .-|.|.|-...+....+.+.+.+|+..+.+.+ . ..+++|+|-|+||.-+-.+|-.--+ -.
T Consensus 147 adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~ 226 (498)
T COG2939 147 ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIAL 226 (498)
T ss_pred CceEEEecCcccCcccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcccc
Confidence 3579999 55899886422212234445666665554432 1 2479999999999998888875444 36
Q ss_pred heeeEec
Q 024796 70 TGLVLRG 76 (262)
Q Consensus 70 ~~lVl~~ 76 (262)
+++|+..
T Consensus 227 ~~~~nls 233 (498)
T COG2939 227 NGNVNLS 233 (498)
T ss_pred CCceEee
Confidence 6666643
No 206
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=91.19 E-value=0.46 Score=41.95 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=29.3
Q ss_pred ceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 45 EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 45 ~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
+.+++|+|.||++|...|.--|-.|.+++=-+++
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 7899999999999999999999999887655443
No 207
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=91.04 E-value=0.62 Score=37.44 Aligned_cols=32 Identities=16% Similarity=0.082 Sum_probs=25.5
Q ss_pred HHHHHHHhCC-CceEEEEeChhHHHHHHHHHhC
Q 024796 34 IEKLRQHLEI-PEWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 34 l~~l~~~l~i-~~~~l~GhS~GG~va~~~a~~~ 65 (262)
.+.++++.+- ..++|+|||-|+.+.+++...+
T Consensus 84 F~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 84 FDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3455666655 4799999999999999998875
No 208
>PLN02606 palmitoyl-protein thioesterase
Probab=90.80 E-value=0.57 Score=39.83 Aligned_cols=34 Identities=18% Similarity=0.085 Sum_probs=30.7
Q ss_pred ceEEEEeChhHHHHHHHHHhCcc--chheeeEeccc
Q 024796 45 EWQVFGGSWGSTLALAYSLAHPD--KVTGLVLRGIF 78 (262)
Q Consensus 45 ~~~l~GhS~GG~va~~~a~~~p~--rv~~lVl~~~~ 78 (262)
-++++|+|-||.++..|+.+.|+ .|+.+|-+|+.
T Consensus 96 G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 58999999999999999999998 59999987763
No 209
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=90.79 E-value=0.77 Score=39.62 Aligned_cols=57 Identities=16% Similarity=0.270 Sum_probs=39.5
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhC------------------------CC-CeEEEeCCCCCCCCchhHHHHHHHHH
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAW------------------------PE-ADFKVVADAGHSANEPGIAAELVATN 251 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~------------------------p~-~~~~~i~~aGH~~~~~~~~~~~~~~~ 251 (262)
.+++||..|+.|.+|+.-..+...+.+ .+ .+++.+-+|||++. . .+.+.++-+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~-qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y-RPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-c-CHHHHHHHH
Confidence 479999999999999875433332222 12 56777779999984 2 577777766
Q ss_pred HHHH
Q 024796 252 EKLK 255 (262)
Q Consensus 252 ~~~~ 255 (262)
+.|.
T Consensus 311 ~~fi 314 (319)
T PLN02213 311 QRWI 314 (319)
T ss_pred HHHH
Confidence 6664
No 210
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=90.73 E-value=0.65 Score=41.86 Aligned_cols=77 Identities=17% Similarity=0.154 Sum_probs=46.1
Q ss_pred ceeEEeec-CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-------CCCceEEEEeChhHHHHHHHHHhC--------
Q 024796 2 EVQEEALH-QRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLAH-------- 65 (262)
Q Consensus 2 ~~~~~~~D-~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-------~i~~~~l~GhS~GG~va~~~a~~~-------- 65 (262)
.+.++.+| .-|.|.|-...+.........++|+..++..+ .-.+++|.|.|+||..+-.+|..-
T Consensus 115 ~anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~ 194 (433)
T PLN03016 115 MANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICC 194 (433)
T ss_pred cCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhccccc
Confidence 36789999 55899985322111111123346665554442 224799999999998666665531
Q ss_pred --ccchheeeEeccc
Q 024796 66 --PDKVTGLVLRGIF 78 (262)
Q Consensus 66 --p~rv~~lVl~~~~ 78 (262)
+=.++|+++-++.
T Consensus 195 ~~~inLkGi~iGNg~ 209 (433)
T PLN03016 195 EPPINLQGYMLGNPV 209 (433)
T ss_pred CCcccceeeEecCCC
Confidence 1256677776654
No 211
>PLN02209 serine carboxypeptidase
Probab=89.15 E-value=1.1 Score=40.53 Aligned_cols=78 Identities=17% Similarity=0.170 Sum_probs=46.7
Q ss_pred ceeEEeec-CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-------CCCceEEEEeChhHHHHHHHHHhC---c----
Q 024796 2 EVQEEALH-QRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLAH---P---- 66 (262)
Q Consensus 2 ~~~~~~~D-~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-------~i~~~~l~GhS~GG~va~~~a~~~---p---- 66 (262)
.+.++.+| .-|.|.|-...+....+....++|+.++++.+ .-.+++|.|.|+||..+-.+|..- .
T Consensus 117 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~ 196 (437)
T PLN02209 117 TANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICC 196 (437)
T ss_pred cCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhccccc
Confidence 35789999 55789884322111112223457766655552 224799999999998666665421 1
Q ss_pred ---cchheeeEecccc
Q 024796 67 ---DKVTGLVLRGIFL 79 (262)
Q Consensus 67 ---~rv~~lVl~~~~~ 79 (262)
=.++++++.++..
T Consensus 197 ~~~inl~Gi~igng~t 212 (437)
T PLN02209 197 NPPINLQGYVLGNPIT 212 (437)
T ss_pred CCceeeeeEEecCccc
Confidence 2456777766543
No 212
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=88.64 E-value=1.5 Score=38.52 Aligned_cols=51 Identities=20% Similarity=0.275 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHh--Ccc---chheeeEecccc
Q 024796 29 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA--HPD---KVTGLVLRGIFL 79 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~--~p~---rv~~lVl~~~~~ 79 (262)
+.++--..|++..|-.+++|+|-|.||.+++.+... ++. .=+++||++|+-
T Consensus 180 qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 180 QLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred HHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 345555667777788999999999999999998763 211 246888888753
No 213
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=87.36 E-value=0.72 Score=41.01 Aligned_cols=58 Identities=17% Similarity=0.250 Sum_probs=35.6
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhC--------------------------CCCeEEEeCCCCCCCCchhHHHHHHHH
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAW--------------------------PEADFKVVADAGHSANEPGIAAELVAT 250 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~--------------------------p~~~~~~i~~aGH~~~~~~~~~~~~~~ 250 (262)
++++||..|+.|.+|+....+...+.+ .+.+++.+.+|||++..+ ++++.++-
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~d-qP~~a~~m 408 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQD-QPEAALQM 408 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHH-SHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhh-CHHHHHHH
Confidence 489999999999999976544443322 244688999999998644 35555555
Q ss_pred HHHHH
Q 024796 251 NEKLK 255 (262)
Q Consensus 251 ~~~~~ 255 (262)
+++|.
T Consensus 409 ~~~fl 413 (415)
T PF00450_consen 409 FRRFL 413 (415)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55553
No 214
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=86.99 E-value=1.3 Score=37.34 Aligned_cols=35 Identities=26% Similarity=0.215 Sum_probs=27.6
Q ss_pred CceEEEEeChhHHHHHHHHHhCcc-chheeeEeccc
Q 024796 44 PEWQVFGGSWGSTLALAYSLAHPD-KVTGLVLRGIF 78 (262)
Q Consensus 44 ~~~~l~GhS~GG~va~~~a~~~p~-rv~~lVl~~~~ 78 (262)
+-++++|+|-||.++..++.++|+ .|+.+|-+|+.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 359999999999999999999975 79999987763
No 215
>PLN02209 serine carboxypeptidase
Probab=86.91 E-value=2 Score=38.87 Aligned_cols=57 Identities=19% Similarity=0.300 Sum_probs=39.6
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhh------------------------CCC-CeEEEeCCCCCCCCchhHHHHHHHHH
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKA------------------------WPE-ADFKVVADAGHSANEPGIAAELVATN 251 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~------------------------~p~-~~~~~i~~aGH~~~~~~~~~~~~~~~ 251 (262)
.+++||..|+.|.+|+....+...+. ..+ .+++.+-+|||++. . ++++.++-+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~-qP~~al~m~ 428 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-Y-LPEESSIMF 428 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-c-CHHHHHHHH
Confidence 47999999999999987543333222 133 67788889999984 2 566666666
Q ss_pred HHHH
Q 024796 252 EKLK 255 (262)
Q Consensus 252 ~~~~ 255 (262)
++|.
T Consensus 429 ~~fi 432 (437)
T PLN02209 429 QRWI 432 (437)
T ss_pred HHHH
Confidence 6654
No 216
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.84 E-value=0.84 Score=36.72 Aligned_cols=38 Identities=21% Similarity=0.262 Sum_probs=32.3
Q ss_pred hCCCceEEEEeChhHHHHHHHHHhCc--cchheeeEeccc
Q 024796 41 LEIPEWQVFGGSWGSTLALAYSLAHP--DKVTGLVLRGIF 78 (262)
Q Consensus 41 l~i~~~~l~GhS~GG~va~~~a~~~p--~rv~~lVl~~~~ 78 (262)
..-+.+.++.||.||...+.+..++| ++|.++.|.++.
T Consensus 187 a~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 187 AKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred cCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 34567899999999999999999998 488888887764
No 217
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=86.45 E-value=0.3 Score=43.05 Aligned_cols=72 Identities=31% Similarity=0.427 Sum_probs=59.6
Q ss_pred eeEEeecCCCCCCCCCC-CCCCCCChHHHHHHHHHHHHHhC-C--CceEEEEeChhHHHHHHHHHhCccchheeeE
Q 024796 3 VQEEALHQRGAGKSTPH-ACLDQNTTWDLIDDIEKLRQHLE-I--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 74 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~-~~~~~~~~~~~~~dl~~l~~~l~-i--~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl 74 (262)
.+-+.+.+|=+|.|.+. .+....++++.+.|..++.++|. | .+|+=-|-|=||+.++.|=.-||+-|.+.|-
T Consensus 89 ~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVa 164 (448)
T PF05576_consen 89 GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVA 164 (448)
T ss_pred cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeee
Confidence 34578899999999753 34445588889999999888874 2 5899999999999999998889999999885
No 218
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=86.37 E-value=20 Score=30.60 Aligned_cols=55 Identities=16% Similarity=0.111 Sum_probs=42.9
Q ss_pred CCChHHHHHHHHHHHHHhCCCceEEEEeChh-----HHHHHHHHHhCccchheeeEecccc
Q 024796 24 QNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG-----STLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 24 ~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~G-----G~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
..+.+++++-+.++++++|-+ .++++-.-= +.+++.-+...|..-++++|+|+..
T Consensus 150 ~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 150 HFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred CccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcc
Confidence 456778999999999999975 777776543 5566666777898999999998754
No 219
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=86.31 E-value=2.3 Score=38.38 Aligned_cols=57 Identities=16% Similarity=0.270 Sum_probs=39.8
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhC------------------------CC-CeEEEeCCCCCCCCchhHHHHHHHHH
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAW------------------------PE-ADFKVVADAGHSANEPGIAAELVATN 251 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~------------------------p~-~~~~~i~~aGH~~~~~~~~~~~~~~~ 251 (262)
.+++||..|+.|.+|+.-..+...+.+ .+ .+++.+-+|||++. . ++++..+-+
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~-qP~~al~m~ 424 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y-RPNETFIMF 424 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-C-CHHHHHHHH
Confidence 479999999999999876443332221 22 56778889999994 2 566666666
Q ss_pred HHHH
Q 024796 252 EKLK 255 (262)
Q Consensus 252 ~~~~ 255 (262)
+.|.
T Consensus 425 ~~Fi 428 (433)
T PLN03016 425 QRWI 428 (433)
T ss_pred HHHH
Confidence 6664
No 220
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=84.68 E-value=2.5 Score=38.31 Aligned_cols=62 Identities=18% Similarity=0.108 Sum_probs=39.3
Q ss_pred ceeEEeecCC-CCCCCC-CCCCCCCCChHHHHHHHHHHHHHh-------CCCceEEEEeChhHHHHHHHHH
Q 024796 2 EVQEEALHQR-GAGKST-PHACLDQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSL 63 (262)
Q Consensus 2 ~~~~~~~D~r-G~G~S~-~~~~~~~~~~~~~~~dl~~l~~~l-------~i~~~~l~GhS~GG~va~~~a~ 63 (262)
++.++.+|+| |.|.|= .............|+|+..++..+ .-.++.|.|-|++|...-++|.
T Consensus 117 ~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 117 EANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred cccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 4678999998 688772 211111122234788876655442 2257999999999966655554
No 221
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.84 E-value=4.6 Score=33.46 Aligned_cols=41 Identities=20% Similarity=0.080 Sum_probs=32.7
Q ss_pred CceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEe-CCCCCCC
Q 024796 198 INATIVQGRYDVCCPMMSAWDLHKAWPEADFKVV-ADAGHSA 238 (262)
Q Consensus 198 ~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i-~~aGH~~ 238 (262)
+-+-+.+|..|..||......+++..|..++.+- +++-|.-
T Consensus 243 d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAF 284 (301)
T KOG3975|consen 243 DSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAF 284 (301)
T ss_pred cEEEEEccCCCCCcchHHHHHHhhhcchhceeeccccCCcce
Confidence 4566899999999999999999999986654433 7788853
No 222
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=81.23 E-value=2.1 Score=36.29 Aligned_cols=28 Identities=21% Similarity=0.185 Sum_probs=23.5
Q ss_pred HHHHHHhCCCceEEEEeChhHHHHHHHH
Q 024796 35 EKLRQHLEIPEWQVFGGSWGSTLALAYS 62 (262)
Q Consensus 35 ~~l~~~l~i~~~~l~GhS~GG~va~~~a 62 (262)
.++++.+|+..-.++|||+|-+.|+..+
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHh
Confidence 4566788999889999999999987665
No 223
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=79.63 E-value=1.5 Score=37.70 Aligned_cols=29 Identities=28% Similarity=0.287 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHH
Q 024796 34 IEKLRQHLEIPEWQVFGGSWGSTLALAYS 62 (262)
Q Consensus 34 l~~l~~~l~i~~~~l~GhS~GG~va~~~a 62 (262)
+.++++..|+.+-.++|||+|=+.|+..|
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 35677888999999999999988887554
No 224
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=79.49 E-value=3.1 Score=34.36 Aligned_cols=33 Identities=21% Similarity=0.140 Sum_probs=26.8
Q ss_pred ceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 45 EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 45 ~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
+..=+|||||+.+-+...+.++..-++-|+++-
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 345689999999999999888766678888764
No 225
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.46 E-value=0.85 Score=35.41 Aligned_cols=33 Identities=24% Similarity=0.227 Sum_probs=29.1
Q ss_pred ceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 45 EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 45 ~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
+..+-|-||||+-|.++..+||+...++|-.+.
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSG 134 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSG 134 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeecc
Confidence 467789999999999999999999999996544
No 226
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.58 E-value=3.3 Score=38.41 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=22.8
Q ss_pred ceEEEEeChhHHHHHHHHHhC-----cc------chheeeEecc
Q 024796 45 EWQVFGGSWGSTLALAYSLAH-----PD------KVTGLVLRGI 77 (262)
Q Consensus 45 ~~~l~GhS~GG~va~~~a~~~-----p~------rv~~lVl~~~ 77 (262)
.++.+||||||.++-.+.+.- |+ ..+|+|+.+.
T Consensus 527 PivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~ 570 (697)
T KOG2029|consen 527 PIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSV 570 (697)
T ss_pred ceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEec
Confidence 578999999998887765532 32 4556666654
No 227
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=78.18 E-value=3 Score=35.33 Aligned_cols=30 Identities=20% Similarity=-0.115 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHH
Q 024796 34 IEKLRQHLEIPEWQVFGGSWGSTLALAYSL 63 (262)
Q Consensus 34 l~~l~~~l~i~~~~l~GhS~GG~va~~~a~ 63 (262)
+.++++.+|+..-.++|||+|=+.|...+-
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 345677789988899999999988887663
No 228
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=77.92 E-value=2.9 Score=35.20 Aligned_cols=29 Identities=17% Similarity=-0.082 Sum_probs=23.1
Q ss_pred HHHHHHhC-CCceEEEEeChhHHHHHHHHH
Q 024796 35 EKLRQHLE-IPEWQVFGGSWGSTLALAYSL 63 (262)
Q Consensus 35 ~~l~~~l~-i~~~~l~GhS~GG~va~~~a~ 63 (262)
.++++..| +..-.++|||+|=+.|+..+-
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 34556677 988999999999998887763
No 229
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=76.25 E-value=1.1 Score=39.48 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHH
Q 024796 29 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLAL 59 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~ 59 (262)
-+++++.+.+....++++.++|||+||.++.
T Consensus 135 Rla~~~~e~~~~~si~kISfvghSLGGLvar 165 (405)
T KOG4372|consen 135 RLAEEVKETLYDYSIEKISFVGHSLGGLVAR 165 (405)
T ss_pred ccHHHHhhhhhccccceeeeeeeecCCeeee
Confidence 4677777776677789999999999998865
No 230
>PRK10279 hypothetical protein; Provisional
Probab=74.77 E-value=3.2 Score=35.52 Aligned_cols=36 Identities=22% Similarity=0.174 Sum_probs=27.7
Q ss_pred HHHHHhCCCceEEEEeChhHHHHHHHHHhCccchhe
Q 024796 36 KLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTG 71 (262)
Q Consensus 36 ~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~ 71 (262)
+.++..|++--.+.|-|+|+.++..||....+.+..
T Consensus 25 ~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~~l~~ 60 (300)
T PRK10279 25 NALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALED 60 (300)
T ss_pred HHHHHcCCCcCEEEEEcHHHHHHHHHHcCChHHHHH
Confidence 334446898778999999999999999876554443
No 231
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=74.68 E-value=2.2 Score=34.16 Aligned_cols=26 Identities=19% Similarity=0.107 Sum_probs=20.9
Q ss_pred CceeEEeeCCCCCCCChhHHHHHhhC
Q 024796 198 INATIVQGRYDVCCPMMSAWDLHKAW 223 (262)
Q Consensus 198 ~P~Lvi~G~~D~~~~~~~~~~~~~~~ 223 (262)
.|++|+||++|.++|...++.+.+.+
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l 194 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAM 194 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHH
Confidence 45789999999999998777766554
No 232
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=74.00 E-value=5.1 Score=34.37 Aligned_cols=32 Identities=25% Similarity=0.179 Sum_probs=25.3
Q ss_pred HHHHHHhCCCceEEEEeChhHHHHHHHHHhCc
Q 024796 35 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP 66 (262)
Q Consensus 35 ~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p 66 (262)
...++..|+.--.++|-|+|+.++..||..++
T Consensus 34 L~aLee~gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 34 IKALEEAGIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 34444558876678999999999999998753
No 233
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=73.22 E-value=7.3 Score=36.69 Aligned_cols=55 Identities=27% Similarity=0.315 Sum_probs=41.9
Q ss_pred CCChHHHHHHHHHHHHH-hCC-CceEEEEeChhHHHHHHHHHhCccchheeeEeccc
Q 024796 24 QNTTWDLIDDIEKLRQH-LEI-PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 78 (262)
Q Consensus 24 ~~~~~~~~~dl~~l~~~-l~i-~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~ 78 (262)
.++..++++-.+.|++. .+- +++.++|-|.||++.-..+-..|+..+++|+--|+
T Consensus 505 ~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPF 561 (682)
T COG1770 505 KNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPF 561 (682)
T ss_pred cccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCc
Confidence 45555666666666655 222 47899999999999999999999999999986553
No 234
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=72.68 E-value=6.1 Score=33.41 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=22.3
Q ss_pred HHHHhCCCceEEEEeChhHHHHHHHHHhC
Q 024796 37 LRQHLEIPEWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 37 l~~~l~i~~~~l~GhS~GG~va~~~a~~~ 65 (262)
+++-..-.++.|-|||+||.+|-.+-+++
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 269 VRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhcccc
Confidence 34444445788999999999998887776
No 235
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=72.68 E-value=6.1 Score=33.41 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=22.3
Q ss_pred HHHHhCCCceEEEEeChhHHHHHHHHHhC
Q 024796 37 LRQHLEIPEWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 37 l~~~l~i~~~~l~GhS~GG~va~~~a~~~ 65 (262)
+++-..-.++.|-|||+||.+|-.+-+++
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 269 VRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhcccc
Confidence 34444445788999999999998887776
No 236
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=71.46 E-value=8 Score=34.47 Aligned_cols=55 Identities=18% Similarity=0.128 Sum_probs=36.3
Q ss_pred CceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCC----chhHHHHHHHHHHHH
Q 024796 198 INATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN----EPGIAAELVATNEKL 254 (262)
Q Consensus 198 ~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~----~~~~~~~~~~~~~~~ 254 (262)
--+|+|+|+.|+..-. +..+.+.-.++.+.+.||+.|... .+..-.++.+.+.++
T Consensus 352 ~rmlFVYG~nDPW~A~--~f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~W 410 (448)
T PF05576_consen 352 PRMLFVYGENDPWSAE--PFRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRW 410 (448)
T ss_pred CeEEEEeCCCCCcccC--ccccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHH
Confidence 3689999999997543 233434446888899999999763 233444445555544
No 237
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=71.33 E-value=6.7 Score=33.02 Aligned_cols=30 Identities=23% Similarity=0.165 Sum_probs=24.6
Q ss_pred HHHHHhCCCceEEEEeChhHHHHHHHHHhC
Q 024796 36 KLRQHLEIPEWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 36 ~l~~~l~i~~~~l~GhS~GG~va~~~a~~~ 65 (262)
+.++..||.-=.+.|-|+|+.++..||..+
T Consensus 30 ~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 30 QALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 334556887667999999999999999875
No 238
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=70.09 E-value=11 Score=30.83 Aligned_cols=22 Identities=27% Similarity=0.122 Sum_probs=18.9
Q ss_pred CceEEEEeChhHHHHHHHHHhC
Q 024796 44 PEWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 44 ~~~~l~GhS~GG~va~~~a~~~ 65 (262)
++++++|+|.|+.++-..+.+.
T Consensus 48 ~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 48 GPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CCEEEEEECHHHHHHHHHHHHH
Confidence 5799999999999998877654
No 239
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=69.92 E-value=4.1 Score=36.96 Aligned_cols=36 Identities=25% Similarity=0.213 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhC
Q 024796 30 LIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~~ 65 (262)
+.+-|..-++.||.+ +.+|-|-|||.+=|+.|+++.
T Consensus 341 I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 341 IINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 677778889999986 689999999999999999876
No 240
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=69.72 E-value=3.4 Score=36.09 Aligned_cols=27 Identities=30% Similarity=0.347 Sum_probs=22.1
Q ss_pred hCCCceEEEEeChhHHHHHHHHHhCcc
Q 024796 41 LEIPEWQVFGGSWGSTLALAYSLAHPD 67 (262)
Q Consensus 41 l~i~~~~l~GhS~GG~va~~~a~~~p~ 67 (262)
++..++.++|||+||+.+++.+-.+.+
T Consensus 156 ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 156 LDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cCccceEEEecccccHHHHHhcccccc
Confidence 455689999999999999998866544
No 241
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=69.50 E-value=7.5 Score=30.06 Aligned_cols=32 Identities=19% Similarity=0.064 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCc
Q 024796 34 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP 66 (262)
Q Consensus 34 l~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p 66 (262)
+.+|.+ .|+..-.+.|-|+|+.+|..|++..+
T Consensus 17 l~aL~e-~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 17 AKALRE-RGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHH-cCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344444 48877789999999999999998764
No 242
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=68.10 E-value=11 Score=34.23 Aligned_cols=42 Identities=24% Similarity=0.369 Sum_probs=29.6
Q ss_pred CceeEEeeCCCCCCCChhHHHHHhh-------------------------CCCCeEEEeCCCCCCCC
Q 024796 198 INATIVQGRYDVCCPMMSAWDLHKA-------------------------WPEADFKVVADAGHSAN 239 (262)
Q Consensus 198 ~P~Lvi~G~~D~~~~~~~~~~~~~~-------------------------~p~~~~~~i~~aGH~~~ 239 (262)
+++||..|+.|.+||....+...+. ..+..++.+.||||++.
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP 430 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVP 430 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCC
Confidence 7999999999999998644332111 11234577889999874
No 243
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=67.94 E-value=7.8 Score=33.15 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=27.9
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCcc
Q 024796 34 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD 67 (262)
Q Consensus 34 l~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~ 67 (262)
+.+.++..|++.-.|.|-|+|+.++..||..+.+
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~~ 62 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMDE 62 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCCh
Confidence 3455566789888999999999999999987654
No 244
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=67.62 E-value=6.9 Score=36.37 Aligned_cols=31 Identities=19% Similarity=0.026 Sum_probs=24.8
Q ss_pred HHHH-HHhCCCceEEEEeChhHHHHHHHHHhC
Q 024796 35 EKLR-QHLEIPEWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 35 ~~l~-~~l~i~~~~l~GhS~GG~va~~~a~~~ 65 (262)
.+++ +.+|+.+-.++|||+|=+.|+..|=-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 4555 689999999999999999988776433
No 245
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=66.51 E-value=14 Score=33.80 Aligned_cols=44 Identities=16% Similarity=0.114 Sum_probs=35.6
Q ss_pred HHHHHh-C--CCceEEEEeChhHHHHHHHHHhCccchheeeEecccc
Q 024796 36 KLRQHL-E--IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 79 (262)
Q Consensus 36 ~l~~~l-~--i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~~~ 79 (262)
++++++ | .+.-.+.|-|-||.-++..|.+||+-..++|.-.|..
T Consensus 104 ~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 104 ALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 444443 4 3467899999999999999999999999999876654
No 246
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=66.21 E-value=9 Score=30.07 Aligned_cols=33 Identities=24% Similarity=0.222 Sum_probs=24.7
Q ss_pred HHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCc
Q 024796 33 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP 66 (262)
Q Consensus 33 dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p 66 (262)
-+.+|. ..++..=.+.|-|.||.+|..+++.++
T Consensus 17 vl~~L~-e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 17 ALKALE-EAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHH-HcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 344443 447766789999999999999998653
No 247
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=65.17 E-value=15 Score=31.76 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=45.1
Q ss_pred eEEeecCC-CCCCCCCCC-CCCCCChHHHHHHHHHHHHHh-------CCCceEEEEeChhHHHHHHHHHhCccchh
Q 024796 4 QEEALHQR-GAGKSTPHA-CLDQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLAHPDKVT 70 (262)
Q Consensus 4 ~~~~~D~r-G~G~S~~~~-~~~~~~~~~~~~dl~~l~~~l-------~i~~~~l~GhS~GG~va~~~a~~~p~rv~ 70 (262)
.+..+|-| |.|.|=-.. +.......+++.|+.++++.+ .-.+++|+--|+||-.|..+++.--+-|+
T Consensus 73 dllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk 148 (414)
T KOG1283|consen 73 DLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIK 148 (414)
T ss_pred cEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHh
Confidence 45667766 778773211 111223446999999998875 23478999999999999888775544333
No 248
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=64.80 E-value=12 Score=30.40 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCc
Q 024796 34 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP 66 (262)
Q Consensus 34 l~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p 66 (262)
+.+|.+ .|++.-.+.|-|.|+.+|..||..++
T Consensus 19 L~aL~e-~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 19 LAALLE-MGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHH-cCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 344433 47776789999999999999997653
No 249
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=63.19 E-value=11 Score=32.50 Aligned_cols=35 Identities=29% Similarity=0.319 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhCCC---ce-EEEEeChhHHHHHHHHHhC
Q 024796 31 IDDIEKLRQHLEIP---EW-QVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 31 ~~dl~~l~~~l~i~---~~-~l~GhS~GG~va~~~a~~~ 65 (262)
+.-+.++-+.+|+. .+ .+.|-|+||.||..|+..+
T Consensus 15 i~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 15 IQMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 33445555556763 23 5889999999999999755
No 250
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=60.89 E-value=25 Score=29.57 Aligned_cols=48 Identities=17% Similarity=0.209 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhCC-----CceEEEEeChhHHHHHHHHHhCcc-chheeeEecc
Q 024796 30 LIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLAHPD-KVTGLVLRGI 77 (262)
Q Consensus 30 ~~~dl~~l~~~l~i-----~~~~l~GhS~GG~va~~~a~~~p~-rv~~lVl~~~ 77 (262)
+-+++..+.++++. +-++++|.|-||.++..++..-|+ .|..+|-+++
T Consensus 73 l~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 73 LWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred HHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccC
Confidence 45555666666544 248999999999999999988764 7888886654
No 251
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=58.49 E-value=13 Score=34.13 Aligned_cols=40 Identities=15% Similarity=0.071 Sum_probs=29.4
Q ss_pred HHHhCC--CceEEEEeChhHHHHHHHHHhC--ccchheeeEecc
Q 024796 38 RQHLEI--PEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGI 77 (262)
Q Consensus 38 ~~~l~i--~~~~l~GhS~GG~va~~~a~~~--p~rv~~lVl~~~ 77 (262)
+.++|= ++++|+|||-||..+..+...- ...+++.|+.++
T Consensus 200 I~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 200 IAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 444554 4799999999999888777652 257999998765
No 252
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=57.32 E-value=10 Score=34.09 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=30.5
Q ss_pred HHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheee
Q 024796 32 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV 73 (262)
Q Consensus 32 ~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lV 73 (262)
--+.+|.++ |+..=++.|-|.|+.+|..|+..-++++..+.
T Consensus 90 GVLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~eel~~~l 130 (421)
T cd07230 90 GVLKALFEA-NLLPRIISGSSAGSIVAAILCTHTDEEIPELL 130 (421)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 334444444 67666899999999999999998788766544
No 253
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=56.80 E-value=16 Score=33.60 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=30.6
Q ss_pred hCCCceEEEEeChhHHHHHHHHHh-----CccchheeeEecccc
Q 024796 41 LEIPEWQVFGGSWGSTLALAYSLA-----HPDKVTGLVLRGIFL 79 (262)
Q Consensus 41 l~i~~~~l~GhS~GG~va~~~a~~-----~p~rv~~lVl~~~~~ 79 (262)
+|..++.|+|+|+|+.+-..+.+. --.-|..++|.|++.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 588899999999999998876652 234677888888754
No 254
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.78 E-value=19 Score=29.06 Aligned_cols=30 Identities=17% Similarity=0.086 Sum_probs=24.1
Q ss_pred HHHhCCCceEEEEeChhHHHHHHHHHhCcc
Q 024796 38 RQHLEIPEWQVFGGSWGSTLALAYSLAHPD 67 (262)
Q Consensus 38 ~~~l~i~~~~l~GhS~GG~va~~~a~~~p~ 67 (262)
++..|+.-=.+.|-|.|+.+|..||+..+.
T Consensus 20 L~e~g~~~d~i~GtS~GAl~aa~~a~~~~~ 49 (215)
T cd07209 20 LAEAGIEPDIISGTSIGAINGALIAGGDPE 49 (215)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCCcH
Confidence 344577656799999999999999998753
No 255
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=56.44 E-value=42 Score=34.57 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=28.5
Q ss_pred CCceEEEEeChhHHHHHHHHHhC--ccchheeeEecccc
Q 024796 43 IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFL 79 (262)
Q Consensus 43 i~~~~l~GhS~GG~va~~~a~~~--p~rv~~lVl~~~~~ 79 (262)
..++.|+|+|+|+.++.++|..- .+....||+.+..+
T Consensus 2181 ~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2181 EGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred CCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 45799999999999999998754 34455688887654
No 256
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=56.14 E-value=21 Score=31.45 Aligned_cols=63 Identities=16% Similarity=0.056 Sum_probs=44.7
Q ss_pred ccccCCceeEEeeCCCCCCCChhHHHHHhhCCCCe-EEEeCCCCCCCCchhHHHHHHHHHHHHHHHHhc
Q 024796 193 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEAD-FKVVADAGHSANEPGIAAELVATNEKLKNLIKN 260 (262)
Q Consensus 193 ~~i~~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~-~~~i~~aGH~~~~~~~~~~~~~~~~~~~~~~~~ 260 (262)
.++ .+|-.|+-|.-|...+++.+.-..+.+|+.+ +..+|+..|..- ...+.|-++.|.+....
T Consensus 326 ~RL-alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~----n~~i~esl~~flnrfq~ 389 (507)
T COG4287 326 LRL-ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI----NQFIKESLEPFLNRFQM 389 (507)
T ss_pred hhc-cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh----HHHHHHHHHHHHHHHhc
Confidence 355 5899999999888767777777778899876 888899999863 22234566666655443
No 257
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=55.40 E-value=20 Score=27.71 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCcc
Q 024796 34 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD 67 (262)
Q Consensus 34 l~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~ 67 (262)
+..+ +..++.-=.+.|-|.|+.+|..++..++.
T Consensus 19 l~~L-~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 19 LRAL-EEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHH-HHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 4444 34477655789999999999999987654
No 258
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=55.00 E-value=30 Score=24.34 Aligned_cols=44 Identities=14% Similarity=0.295 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHH--HHHHHHHhCccchheeeE
Q 024796 31 IDDIEKLRQHLEIPEWQVFGGSWGST--LALAYSLAHPDKVTGLVL 74 (262)
Q Consensus 31 ~~dl~~l~~~l~i~~~~l~GhS~GG~--va~~~a~~~p~rv~~lVl 74 (262)
..-|+.+++.+--.+++|+|=|--.- +-.+.|.+||++|.++.+
T Consensus 52 ~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 52 RDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 45578888888888999999885543 333467899999988754
No 259
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=54.64 E-value=15 Score=31.69 Aligned_cols=42 Identities=14% Similarity=0.270 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheee
Q 024796 31 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV 73 (262)
Q Consensus 31 ~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lV 73 (262)
+--+.++.++ |+..-++.|-|.|+.+|..++...++.+..+.
T Consensus 84 ~GVlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~t~~El~~~~ 125 (323)
T cd07231 84 VGVVRTLVEH-QLLPRVIAGSSVGSIVCAIIATRTDEELQSFF 125 (323)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3444555554 77767899999999999999987777766554
No 260
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=53.77 E-value=13 Score=33.27 Aligned_cols=43 Identities=16% Similarity=0.192 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeE
Q 024796 31 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 74 (262)
Q Consensus 31 ~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl 74 (262)
+--+.+|.++ |+..=++.|-|.|+.+|..|+.+-++++..++.
T Consensus 83 ~GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~~el~~~~~ 125 (407)
T cd07232 83 FGVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTDEELKQLLV 125 (407)
T ss_pred HHHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHHHh
Confidence 3445555555 676667999999999999999988888876644
No 261
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=53.10 E-value=26 Score=33.13 Aligned_cols=70 Identities=26% Similarity=0.272 Sum_probs=46.7
Q ss_pred EEeecCCCCCCCCC--CC----CCCCCChHHHHHHHHHHHHHhCC---CceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 5 EEALHQRGAGKSTP--HA----CLDQNTTWDLIDDIEKLRQHLEI---PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 5 ~~~~D~rG~G~S~~--~~----~~~~~~~~~~~~dl~~l~~~l~i---~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
+-.-|.||=|.=.. +. ...++...+++.-.+.|++. |. ++..+-|.|-||.++-.+.=.+|+.+..+|+=
T Consensus 502 la~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~-gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~ 580 (712)
T KOG2237|consen 502 LAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVEN-GYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAK 580 (712)
T ss_pred EEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHc-CCCCccceeEecccCccchhHHHhccCchHhhhhhhc
Confidence 34457888664321 11 11245555555555555554 33 57899999999999999998999999887764
No 262
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=52.89 E-value=13 Score=30.26 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=21.4
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhC
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAW 223 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~ 223 (262)
..|++|+||+.|..+.+..+.++.+..
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 479999999999988877666665543
No 263
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=52.65 E-value=15 Score=34.51 Aligned_cols=69 Identities=23% Similarity=0.325 Sum_probs=45.1
Q ss_pred cccCCceeEEeeCCCCCCCChh-HH---HHHhhC----CCCeEEEeCCCCCCC---CchhH-------HHHHHHHHHHHH
Q 024796 194 NIRHINATIVQGRYDVCCPMMS-AW---DLHKAW----PEADFKVVADAGHSA---NEPGI-------AAELVATNEKLK 255 (262)
Q Consensus 194 ~i~~~P~Lvi~G~~D~~~~~~~-~~---~~~~~~----p~~~~~~i~~aGH~~---~~~~~-------~~~~~~~~~~~~ 255 (262)
+|+..|++|+||+.|.++|..+ ++ .+-+.. ...+++.++++-|+= ..+.. -.=+..+++.|.
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~ 631 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMW 631 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHH
Confidence 4434699999999999998753 22 222211 346788999999963 11211 122457888888
Q ss_pred HHHhcCC
Q 024796 256 NLIKNGH 262 (262)
Q Consensus 256 ~~~~~~~ 262 (262)
+.+++|.
T Consensus 632 a~L~~G~ 638 (690)
T PF10605_consen 632 AHLKSGA 638 (690)
T ss_pred HHhhcCC
Confidence 8888874
No 264
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=51.52 E-value=5.4 Score=32.47 Aligned_cols=47 Identities=21% Similarity=0.291 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHh---C-CCceEEEEeChhHHHHHHHHHhCccchheeeEecc
Q 024796 30 LIDDIEKLRQHL---E-IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 30 ~~~dl~~l~~~l---~-i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
.-.|+..+++.| | ..++-++|..|||.++..+....| .+.+.|..-+
T Consensus 102 ~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hp 152 (242)
T KOG3043|consen 102 IWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHP 152 (242)
T ss_pred chhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecC
Confidence 345565555555 4 346789999999999999999988 7777776543
No 265
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=51.21 E-value=21 Score=32.74 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=30.1
Q ss_pred CceeEEeeCCCCCCCChhH----HHHHhhCC--------CCeEEEeCCCCCCC
Q 024796 198 INATIVQGRYDVCCPMMSA----WDLHKAWP--------EADFKVVADAGHSA 238 (262)
Q Consensus 198 ~P~Lvi~G~~D~~~~~~~~----~~~~~~~p--------~~~~~~i~~aGH~~ 238 (262)
-..++.||-.|.++|+... +++.+... -.|+..+||.+|+.
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~ 406 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCG 406 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccC
Confidence 3688999999999887644 23333343 24899999999986
No 266
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=50.45 E-value=16 Score=32.43 Aligned_cols=37 Identities=8% Similarity=0.024 Sum_probs=29.6
Q ss_pred HHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeE
Q 024796 38 RQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 74 (262)
Q Consensus 38 ~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl 74 (262)
+...|+..=+|.|-|.|+.+|..+|..-++.+..+..
T Consensus 105 L~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l~ 141 (391)
T cd07229 105 LWLRGLLPRIITGTATGALIAALVGVHTDEELLRFLD 141 (391)
T ss_pred HHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHHh
Confidence 3444777678999999999999999977777777654
No 267
>PF02972 Phycoerythr_ab: Phycoerythrin, alpha/beta chain; InterPro: IPR004228 Cryptophytes are unicellular photosynthetic algae that use a lumenally located light-harvesting system, which is distinct from the phycobilisome structure found in cyanobacteria and red algae. One of the key components of this system is water-soluble phycoerythrin (PE) 545 whose expression is enhanced by low light levels []. Phycoerythrin (PE) 545 is a heterodimeric of alpha(1)alpha(2)betabeta subunits. Each alpha subunit carries a covalently linked 15,16-dihydrobiliverdin chromophore that probably acts as the final energy acceptor. The architecture of the heterodimer suggests that PE 545 may dock to an acceptor protein via a deep cleft and that energy may be transferred via this intermediary protein to the reaction centre [].; GO: 0030089 phycobilisome; PDB: 1XG0_B 1QGW_B 1XF6_B.
Probab=49.66 E-value=13 Score=22.81 Aligned_cols=14 Identities=14% Similarity=0.342 Sum_probs=7.8
Q ss_pred eEEeecCCCCCCCC
Q 024796 4 QEEALHQRGAGKST 17 (262)
Q Consensus 4 ~~~~~D~rG~G~S~ 17 (262)
.|..+|+|||.+..
T Consensus 4 vItiFDhRGC~r~~ 17 (57)
T PF02972_consen 4 VITIFDHRGCDRAP 17 (57)
T ss_dssp EEEEEE-TT-SS--
T ss_pred EEEEecccccCCCc
Confidence 46789999997653
No 268
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=49.29 E-value=34 Score=27.30 Aligned_cols=41 Identities=5% Similarity=-0.040 Sum_probs=31.4
Q ss_pred CCChHHHHHHHHHHHHHhCCCceEEEEeCh----hHHHHHHHHHhC
Q 024796 24 QNTTWDLIDDIEKLRQHLEIPEWQVFGGSW----GSTLALAYSLAH 65 (262)
Q Consensus 24 ~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~----GG~va~~~a~~~ 65 (262)
.++.+.+++-+.++++..+ ...+|+|||- |..++-..|.+.
T Consensus 90 ~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 90 GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 3445567888888888877 5788999888 778888887654
No 269
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=49.28 E-value=29 Score=28.82 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=26.0
Q ss_pred HHHHHHHhCCC-ceEEEEeChhHHHHHHHHHhCccchh
Q 024796 34 IEKLRQHLEIP-EWQVFGGSWGSTLALAYSLAHPDKVT 70 (262)
Q Consensus 34 l~~l~~~l~i~-~~~l~GhS~GG~va~~~a~~~p~rv~ 70 (262)
+.+|.++ ++. -=.+.|-|.|+.+|..|++..+.+..
T Consensus 17 l~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g~~~~~~ 53 (266)
T cd07208 17 LDAFLEA-GIRPFDLVIGVSAGALNAASYLSGQRGRAL 53 (266)
T ss_pred HHHHHHc-CCCCCCEEEEECHHHHhHHHHHhCCcchHH
Confidence 3444443 565 33789999999999999998766543
No 270
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=49.00 E-value=33 Score=26.41 Aligned_cols=27 Identities=26% Similarity=0.244 Sum_probs=21.6
Q ss_pred HHhCCCceEEEEeChhHHHHHHHHHhC
Q 024796 39 QHLEIPEWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 39 ~~l~i~~~~l~GhS~GG~va~~~a~~~ 65 (262)
+..++.-=.+.|-|.|+.+|..++...
T Consensus 23 ~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 23 EEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 344666557999999999999999765
No 271
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=48.61 E-value=22 Score=29.38 Aligned_cols=39 Identities=23% Similarity=0.286 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhCCC---ce-EEEEeChhHHHHHHHHHhCccchhe
Q 024796 31 IDDIEKLRQHLEIP---EW-QVFGGSWGSTLALAYSLAHPDKVTG 71 (262)
Q Consensus 31 ~~dl~~l~~~l~i~---~~-~l~GhS~GG~va~~~a~~~p~rv~~ 71 (262)
+--+..|.++ |+. ++ .+.|-|+|+.+|..|+. .|+++..
T Consensus 15 iGVl~~L~e~-g~~l~~~~~~i~GtSaGAl~aa~~a~-~~~~~~~ 57 (246)
T cd07222 15 LGAAKALLRH-GKKLLKRVKRFAGASAGSLVAAVLLT-APEKIEE 57 (246)
T ss_pred HHHHHHHHHc-CchhhccCCEEEEECHHHHHHHHHhc-ChHHHHH
Confidence 3334445553 553 34 78999999999999994 4655544
No 272
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=47.46 E-value=16 Score=30.31 Aligned_cols=16 Identities=31% Similarity=0.493 Sum_probs=12.9
Q ss_pred CCCceEEEEeChhHHH
Q 024796 42 EIPEWQVFGGSWGSTL 57 (262)
Q Consensus 42 ~i~~~~l~GhS~GG~v 57 (262)
+++.++++|||+|..=
T Consensus 233 ~i~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVD 248 (270)
T ss_pred CCCEEEEEeCCCchhh
Confidence 4578999999998753
No 273
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=44.86 E-value=34 Score=27.99 Aligned_cols=37 Identities=16% Similarity=0.081 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhCccc
Q 024796 31 IDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAHPDK 68 (262)
Q Consensus 31 ~~dl~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~~p~r 68 (262)
+--+..|.+ .|+. .-.+.|-|.|+.+|..|+...+.+
T Consensus 15 ~GVl~~L~e-~gi~~~~~~i~G~SAGAl~aa~~asg~~~~ 53 (233)
T cd07224 15 LGVLSLLIE-AGVINETTPLAGASAGSLAAACSASGLSPE 53 (233)
T ss_pred HHHHHHHHH-cCCCCCCCEEEEEcHHHHHHHHHHcCCCHH
Confidence 334455554 4665 347999999999999999976543
No 274
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=43.51 E-value=30 Score=31.57 Aligned_cols=44 Identities=11% Similarity=0.030 Sum_probs=31.7
Q ss_pred HHHHHHHhCCC--ceEEEEeChhHHHHHHHHHh--CccchheeeEecc
Q 024796 34 IEKLRQHLEIP--EWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGI 77 (262)
Q Consensus 34 l~~l~~~l~i~--~~~l~GhS~GG~va~~~a~~--~p~rv~~lVl~~~ 77 (262)
|.+-++++|=+ ++.|+|+|-||+.++.+..- ....++++|+.++
T Consensus 168 V~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg 215 (491)
T COG2272 168 VRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSG 215 (491)
T ss_pred HHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCC
Confidence 34557788765 79999999999998877642 2346777776554
No 275
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=42.36 E-value=35 Score=30.69 Aligned_cols=50 Identities=18% Similarity=0.198 Sum_probs=26.7
Q ss_pred ceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCC----CchhHHHHHHHHH
Q 024796 199 NATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA----NEPGIAAELVATN 251 (262)
Q Consensus 199 P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~----~~~~~~~~~~~~~ 251 (262)
-++++.|+.|+........ +.-+....++|||++|+. ..+.-+.++.++-
T Consensus 378 nviFtNG~~DPW~~lgv~~---~~~~~~~~~~I~g~~Hc~Dl~~~~~~D~~~l~~aR 431 (434)
T PF05577_consen 378 NVIFTNGELDPWRALGVTS---DSSDSVPAIVIPGGAHCSDLYPPNPNDPPELKAAR 431 (434)
T ss_dssp SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGGS---TT--HHHHHHH
T ss_pred eEEeeCCCCCCcccccCCC---CCCCCcccEEECCCeeeccccCCCCCCCHHHHHHH
Confidence 6789999999986654222 222445567899999986 1233445555443
No 276
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=41.80 E-value=40 Score=28.81 Aligned_cols=38 Identities=13% Similarity=0.235 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccch
Q 024796 31 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKV 69 (262)
Q Consensus 31 ~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv 69 (262)
+--+.+|.++ |+..-++.|-|.|+.+|..|+....+++
T Consensus 85 ~Gvl~aL~e~-~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 85 LGVVKALWEQ-DLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHHHHHc-CCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 4445555543 6666679999999999999998766665
No 277
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=39.83 E-value=8.4 Score=36.01 Aligned_cols=38 Identities=21% Similarity=0.173 Sum_probs=28.5
Q ss_pred HHhCCCceEEEEeChhHHHHHHHHH-hCccchheeeEec
Q 024796 39 QHLEIPEWQVFGGSWGSTLALAYSL-AHPDKVTGLVLRG 76 (262)
Q Consensus 39 ~~l~i~~~~l~GhS~GG~va~~~a~-~~p~rv~~lVl~~ 76 (262)
-++....++|+|.|||+.|+...+. .+...|+++|.+|
T Consensus 245 gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCig 283 (784)
T KOG3253|consen 245 GEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIG 283 (784)
T ss_pred ccCCCCceEEEecccCceeeEEeccccCCceEEEEEEec
Confidence 3445568999999999988887765 3445688888875
No 278
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=39.58 E-value=94 Score=26.21 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=26.4
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCC-CCCC
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADA-GHSA 238 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~a-GH~~ 238 (262)
.||+.++.|++- ...+.++.+|+.+++.++.+ |+..
T Consensus 147 gVPV~lVsGDd~------~~~ea~~~~P~~~tv~vK~~~gr~a 183 (270)
T cd08769 147 GVPVVLVAGDSE------LEKEVKEETPWAVFVPTKESLSRYS 183 (270)
T ss_pred CCCEEEEecCHH------HHHHHHHhCCCceEEEEeeecCCCc
Confidence 699999999872 23456666799999988654 6543
No 279
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=39.06 E-value=39 Score=28.37 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeEe
Q 024796 31 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 75 (262)
Q Consensus 31 ~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl~ 75 (262)
|--+++|++.-.+.=--++|-|+|+.-...|.++.+.|-++.++-
T Consensus 27 AGVLD~fl~a~~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~~ 71 (292)
T COG4667 27 AGVLDEFLRANFNPFDLVVGVSAGALNLVAYLSKQRGRARRVIVE 71 (292)
T ss_pred HHHHHHHHHhccCCcCeeeeecHhHHhHHHHhhcCCchHHHHHHH
Confidence 555677776655442347899999999999999999999988863
No 280
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=37.19 E-value=39 Score=28.07 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhCCC----ceEEEEeChhHHHHHHHHHhCc-cchheee
Q 024796 31 IDDIEKLRQHLEIP----EWQVFGGSWGSTLALAYSLAHP-DKVTGLV 73 (262)
Q Consensus 31 ~~dl~~l~~~l~i~----~~~l~GhS~GG~va~~~a~~~p-~rv~~lV 73 (262)
+--+..|.++ +++ --.+.|-|.|+.++..|++..+ +++...+
T Consensus 16 ~GVl~aL~e~-~~~l~~~~~~i~GtSAGAl~aa~~asg~~~~~~~~~~ 62 (252)
T cd07221 16 VGVTRCLSER-APHLLRDARMFFGASAGALHCVTFLSGLPLDQILQIL 62 (252)
T ss_pred HHHHHHHHHh-CcchhccCCEEEEEcHHHHHHHHHHhCCCHHHHHHHH
Confidence 3345555555 443 3469999999999999998776 5555543
No 281
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=35.97 E-value=62 Score=26.68 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=25.9
Q ss_pred HHHHHHHHhCCC--c--eEEEEeChhHHHHHHHHHhCc-cchh
Q 024796 33 DIEKLRQHLEIP--E--WQVFGGSWGSTLALAYSLAHP-DKVT 70 (262)
Q Consensus 33 dl~~l~~~l~i~--~--~~l~GhS~GG~va~~~a~~~p-~rv~ 70 (262)
-+..|.++ |+. . -.+.|-|.|+.+|..||...+ +++.
T Consensus 17 Vl~~L~e~-g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~~~ 58 (243)
T cd07204 17 VASALREH-APRLLQNARRIAGASAGAIVAAVVLCGVSMEEAC 58 (243)
T ss_pred HHHHHHHc-CcccccCCCEEEEEcHHHHHHHHHHhCCCHHHHH
Confidence 34444444 543 2 389999999999999999775 5543
No 282
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=35.14 E-value=41 Score=29.20 Aligned_cols=27 Identities=19% Similarity=0.061 Sum_probs=19.0
Q ss_pred HHHHHhCCCc------eEEEEeChhHHHHHHHH
Q 024796 36 KLRQHLEIPE------WQVFGGSWGSTLALAYS 62 (262)
Q Consensus 36 ~l~~~l~i~~------~~l~GhS~GG~va~~~a 62 (262)
+++...|+.. -.++|||+|=+.|+..|
T Consensus 110 ~~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~A 142 (343)
T PLN02752 110 EKLRARDGGQAVIDSVDVCAGLSLGEYTALVFA 142 (343)
T ss_pred HHHHhcCCCcccccCCCeeeeccHHHHHHHHHh
Confidence 4455666432 25789999999888776
No 283
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=34.64 E-value=91 Score=23.84 Aligned_cols=41 Identities=24% Similarity=0.255 Sum_probs=24.1
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEeChh
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG 54 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~G 54 (262)
..||+.|.+|=- .+...+|+.+..+.+. |-+=..++|-|.|
T Consensus 68 ~~vi~Ld~~Gk~----------~sSe~fA~~l~~~~~~-G~~i~f~IGG~~G 108 (155)
T COG1576 68 SYVVLLDIRGKA----------LSSEEFADFLERLRDD-GRDISFLIGGADG 108 (155)
T ss_pred CeEEEEecCCCc----------CChHHHHHHHHHHHhc-CCeEEEEEeCccc
Confidence 367888888732 2334667766665544 4222456777776
No 284
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=34.09 E-value=42 Score=37.56 Aligned_cols=28 Identities=25% Similarity=0.152 Sum_probs=23.4
Q ss_pred HHHHHHhCCCceEEEEeChhHHHHHHHH
Q 024796 35 EKLRQHLEIPEWQVFGGSWGSTLALAYS 62 (262)
Q Consensus 35 ~~l~~~l~i~~~~l~GhS~GG~va~~~a 62 (262)
.++++.+|+..-.++|||+|=+.|+..|
T Consensus 665 ~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 665 YKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 4567888998888999999998887665
No 285
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=33.62 E-value=71 Score=26.40 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=26.9
Q ss_pred HHHHHHHHHHh-CCCceEEEEeChhHHHHHHHHHhCc-cchhe
Q 024796 31 IDDIEKLRQHL-EIPEWQVFGGSWGSTLALAYSLAHP-DKVTG 71 (262)
Q Consensus 31 ~~dl~~l~~~l-~i~~~~l~GhS~GG~va~~~a~~~p-~rv~~ 71 (262)
+--+..|.++- .+..-.+.|-|.|+.+|..||+..+ +++..
T Consensus 16 ~GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~~~~~~~ 58 (245)
T cd07218 16 VGVAVCLKKYAPHLLLNKISGASAGALAACCLLCDLPLGEMTS 58 (245)
T ss_pred HHHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCcHHHHHH
Confidence 34455555552 1222239999999999999999765 55543
No 286
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=33.42 E-value=1.1e+02 Score=28.34 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=25.9
Q ss_pred HHHhC--CCceEEEEeChhHHHHHHHHHh--CccchheeeEec
Q 024796 38 RQHLE--IPEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRG 76 (262)
Q Consensus 38 ~~~l~--i~~~~l~GhS~GG~va~~~a~~--~p~rv~~lVl~~ 76 (262)
+..+| -++++|+|||-||..+-.+.+. .....++.|..+
T Consensus 187 I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~S 229 (545)
T KOG1516|consen 187 IPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMS 229 (545)
T ss_pred HHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhc
Confidence 44454 3579999999999998776652 124555556543
No 287
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=32.99 E-value=50 Score=28.42 Aligned_cols=22 Identities=32% Similarity=0.113 Sum_probs=18.4
Q ss_pred CCCceEEEEeChhHHHHHHHHH
Q 024796 42 EIPEWQVFGGSWGSTLALAYSL 63 (262)
Q Consensus 42 ~i~~~~l~GhS~GG~va~~~a~ 63 (262)
+..+..+.|||+|=+-|+..+-
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4777799999999999887764
No 288
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=32.05 E-value=33 Score=26.30 Aligned_cols=47 Identities=19% Similarity=0.307 Sum_probs=22.7
Q ss_pred CCCCCCCCCC-CCCCCCChHHHHHHH----HHHHHHhCC----CceEEEEeChhHH
Q 024796 10 QRGAGKSTPH-ACLDQNTTWDLIDDI----EKLRQHLEI----PEWQVFGGSWGST 56 (262)
Q Consensus 10 ~rG~G~S~~~-~~~~~~~~~~~~~dl----~~l~~~l~i----~~~~l~GhS~GG~ 56 (262)
+-|||..... .....++...++.-+ ..|.+.+++ +++.|+|=||+..
T Consensus 61 lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 4589987321 123345666788888 455555544 2445555554443
No 289
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=31.56 E-value=41 Score=29.40 Aligned_cols=19 Identities=37% Similarity=0.284 Sum_probs=16.6
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 024796 47 QVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 47 ~l~GhS~GG~va~~~a~~~ 65 (262)
.+.|-|.||.||..++..+
T Consensus 44 lIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 44 FVGGTSTGSIIAACIALGM 62 (344)
T ss_pred EEEEecHHHHHHHHHHcCC
Confidence 5889999999999998643
No 290
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=31.35 E-value=58 Score=27.80 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhCCC---ce-EEEEeChhHHHHHHHHH
Q 024796 31 IDDIEKLRQHLEIP---EW-QVFGGSWGSTLALAYSL 63 (262)
Q Consensus 31 ~~dl~~l~~~l~i~---~~-~l~GhS~GG~va~~~a~ 63 (262)
+.-+.++-+.++.. .+ .+.|-|.||.||..++.
T Consensus 24 ~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 24 LEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred HHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 44455555655543 23 48899999999999986
No 291
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=30.40 E-value=76 Score=27.01 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=23.0
Q ss_pred eEEeecCCCCCCCCCCC-CCCCCCh----HHHHHHHHHHHHHhCCC
Q 024796 4 QEEALHQRGAGKSTPHA-CLDQNTT----WDLIDDIEKLRQHLEIP 44 (262)
Q Consensus 4 ~~~~~D~rG~G~S~~~~-~~~~~~~----~~~~~dl~~l~~~l~i~ 44 (262)
.+|++| ||||..++-. +.....- .+++.-+.+.++.-|++
T Consensus 57 ~~IvID-pGHGG~DpGAvg~~G~~EKdi~L~IA~~l~~~L~~~G~~ 101 (287)
T PRK10319 57 RVVMLD-PGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGID 101 (287)
T ss_pred eEEEEE-CCCCCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHHCCCE
Confidence 588999 7999876311 1111121 23566666777666663
No 292
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=29.86 E-value=98 Score=23.36 Aligned_cols=28 Identities=18% Similarity=0.112 Sum_probs=20.4
Q ss_pred HHHHHHHhCC--CceEEEEeChhHHHHHHHH
Q 024796 34 IEKLRQHLEI--PEWQVFGGSWGSTLALAYS 62 (262)
Q Consensus 34 l~~l~~~l~i--~~~~l~GhS~GG~va~~~a 62 (262)
+..+.++ ++ .--.+.|-|.|+.++..|+
T Consensus 17 l~~l~~~-~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 17 LSALAER-GLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHh-CCccCCCEEEEEcHHHHHHHHHh
Confidence 4444443 44 4446889999999999999
No 293
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=29.84 E-value=71 Score=31.11 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=23.8
Q ss_pred HHHHHHHHH---HhCCCceEEEEeChhHHHHHHHHH
Q 024796 31 IDDIEKLRQ---HLEIPEWQVFGGSWGSTLALAYSL 63 (262)
Q Consensus 31 ~~dl~~l~~---~l~i~~~~l~GhS~GG~va~~~a~ 63 (262)
-.++.+.++ .+++.--+|.|-|+||+++..||.
T Consensus 50 Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 50 YGALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 334444444 345666689999999999999997
No 294
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.42 E-value=94 Score=26.65 Aligned_cols=34 Identities=21% Similarity=0.046 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhCCC----ceEEEEeC--hhHHHHHHHHHh
Q 024796 31 IDDIEKLRQHLEIP----EWQVFGGS--WGSTLALAYSLA 64 (262)
Q Consensus 31 ~~dl~~l~~~l~i~----~~~l~GhS--~GG~va~~~a~~ 64 (262)
+.-+.+++++.+++ ++.++|.| ||-.+|..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 45578889998774 68999997 999999988754
No 295
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=28.70 E-value=52 Score=17.37 Aligned_cols=17 Identities=24% Similarity=0.661 Sum_probs=10.6
Q ss_pred hhHHHHH------HHHHhCccch
Q 024796 53 WGSTLAL------AYSLAHPDKV 69 (262)
Q Consensus 53 ~GG~va~------~~a~~~p~rv 69 (262)
.||.++. -||+.+|||.
T Consensus 7 l~~~va~~L~vYL~~ALlrPErF 29 (29)
T PRK14759 7 LAGAVSLGLLIYLTYALLRPERF 29 (29)
T ss_pred HHHHHHHHHHHHHHHHHhCcccC
Confidence 4555554 4577888874
No 296
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=27.90 E-value=97 Score=25.71 Aligned_cols=36 Identities=19% Similarity=0.109 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhCCC----ceEEEEeChhHHHHHHHHHhCcc
Q 024796 31 IDDIEKLRQHLEIP----EWQVFGGSWGSTLALAYSLAHPD 67 (262)
Q Consensus 31 ~~dl~~l~~~l~i~----~~~l~GhS~GG~va~~~a~~~p~ 67 (262)
+--+..|.++ ++. --.+.|-|.|+.+|..|+...+-
T Consensus 20 ~GVl~~L~e~-g~~l~~~~~~i~G~SAGAl~aa~~a~g~~~ 59 (249)
T cd07220 20 VGVASCLLEH-APFLVANARKIYGASAGALTATALVTGVCL 59 (249)
T ss_pred HHHHHHHHhc-CCcccccCCeEEEEcHHHHHHHHHHcCCCH
Confidence 4445556665 443 34588999999999999987753
No 297
>COG0218 Predicted GTPase [General function prediction only]
Probab=27.47 E-value=42 Score=26.87 Aligned_cols=14 Identities=14% Similarity=0.107 Sum_probs=11.9
Q ss_pred EEeecCCCCCCCCC
Q 024796 5 EEALHQRGAGKSTP 18 (262)
Q Consensus 5 ~~~~D~rG~G~S~~ 18 (262)
....|+||||....
T Consensus 72 ~~lVDlPGYGyAkv 85 (200)
T COG0218 72 LRLVDLPGYGYAKV 85 (200)
T ss_pred EEEEeCCCcccccC
Confidence 67899999998764
No 298
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=27.25 E-value=72 Score=23.05 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHH
Q 024796 29 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLAL 59 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~ 59 (262)
.....++-....|+++.+.++|||--|.+..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 4567788888999999999999988776655
No 299
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.59 E-value=56 Score=27.63 Aligned_cols=19 Identities=37% Similarity=0.368 Sum_probs=17.1
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 024796 47 QVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 47 ~l~GhS~GG~va~~~a~~~ 65 (262)
.+.|-|.||.+|..++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6899999999999999765
No 300
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=25.83 E-value=85 Score=26.66 Aligned_cols=35 Identities=26% Similarity=0.245 Sum_probs=26.6
Q ss_pred CceEEEEeChhHHHHHHHHH---hCccchheeeEeccc
Q 024796 44 PEWQVFGGSWGSTLALAYSL---AHPDKVTGLVLRGIF 78 (262)
Q Consensus 44 ~~~~l~GhS~GG~va~~~a~---~~p~rv~~lVl~~~~ 78 (262)
.|.+|.|.|+|++=+...-. ..-+++.+.++.|+.
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP 146 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPP 146 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCC
Confidence 47999999999987765432 234689999999874
No 301
>PLN00179 acyl- [acyl-carrier protein] desaturase
Probab=25.66 E-value=83 Score=27.82 Aligned_cols=64 Identities=20% Similarity=0.128 Sum_probs=46.7
Q ss_pred ecCCCCCCCCCCCC------------CCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheee
Q 024796 8 LHQRGAGKSTPHAC------------LDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV 73 (262)
Q Consensus 8 ~D~rG~G~S~~~~~------------~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lV 73 (262)
+.+|||+-.++..+ ..-|+..++++=++.+++..++.+. -|.|==|-=|+.|.+.+|.|+++|-
T Consensus 288 i~MPa~~m~dg~d~~lF~~fsavaqr~GVYt~~dy~dIl~~lv~~W~v~~l--~gLs~eg~kArd~l~~l~~rirr~~ 363 (390)
T PLN00179 288 ITMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEHLVRRWKVEEL--TGLSGEGRRAQDYVCGLPPRIRRLE 363 (390)
T ss_pred CCCCcccCCCCCcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCcCcc--cCCCHHHHHHHHHHHHhHHHHHHHH
Confidence 56888887652211 0125555677555678888888765 5999999999999999999998853
No 302
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=25.16 E-value=64 Score=25.49 Aligned_cols=24 Identities=25% Similarity=0.102 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhCCCceEEEEeCh
Q 024796 30 LIDDIEKLRQHLEIPEWQVFGGSW 53 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~~~~l~GhS~ 53 (262)
++.-+..|++++++....|+|||-
T Consensus 135 L~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 135 LAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHcCCCHHhEEehhh
Confidence 556667788888987788999985
No 303
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=24.94 E-value=1.8e+02 Score=22.83 Aligned_cols=39 Identities=13% Similarity=0.021 Sum_probs=21.5
Q ss_pred EEeecCCCCCCCCCCC-CCCCCChH----HHHHHHHHHHHHhCCC
Q 024796 5 EEALHQRGAGKSTPHA-CLDQNTTW----DLIDDIEKLRQHLEIP 44 (262)
Q Consensus 5 ~~~~D~rG~G~S~~~~-~~~~~~~~----~~~~dl~~l~~~l~i~ 44 (262)
+|++| ||||.+++-. ......-. +++.-+...+++.|.+
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~~ 45 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGAL 45 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCE
Confidence 56777 8999876422 11111111 3455566677777764
No 304
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=24.86 E-value=64 Score=24.44 Aligned_cols=21 Identities=24% Similarity=0.012 Sum_probs=16.9
Q ss_pred ceEEEEeChhHHHHHHHHHhC
Q 024796 45 EWQVFGGSWGSTLALAYSLAH 65 (262)
Q Consensus 45 ~~~l~GhS~GG~va~~~a~~~ 65 (262)
--.+.|-|.||.+|..+++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 347999999999999888764
No 305
>PF15566 Imm18: Immunity protein 18
Probab=24.34 E-value=71 Score=19.48 Aligned_cols=28 Identities=21% Similarity=0.422 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHH
Q 024796 29 DLIDDIEKLRQHLEIPEWQVFGGSWGST 56 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~~~~l~GhS~GG~ 56 (262)
-++++|..+.....-+..+++--||||.
T Consensus 6 ~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 6 LLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHhccCCCCceecccccccc
Confidence 4678888888887777899999999985
No 306
>PF03405 FA_desaturase_2: Fatty acid desaturase; InterPro: IPR005067 Fatty acid desaturases are enzymes that catalyze the insertion of a double bond at the delta position of fatty acids. There seem to be two distinct families of fatty acid desaturases which do not seem to be evolutionary related. Family 1 is composed of: - Stearoyl-CoA desaturase (SCD) (1.14.19.1 from EC) []. Family 2 is composed of: - Bacterial fatty acid desaturases. - Plant stearoyl-acyl-carrier-protein desaturase (1.14.19.1 from EC) [], this enzyme catalyzes the introduction of a double bond at the delta(9) position of steraoyl-ACP to produce oleoyl-ACP. This enzyme is responsible for the conversion of saturated fatty acids to unsaturated fatty acids in the synthesis of vegetable oils. - Cyanobacterial DesA [], an enzyme that can introduce a second cis double bond at the delta(12) position of fatty acid bound to membranes glycerolipids. DesA is involved in chilling tolerance; the phase transition temperature of lipids of cellular membranes being dependent on the degree of unsaturation of fatty acids of the membrane lipids. This entry contains fatty acid desaturases belonging to Family 2. ; GO: 0045300 acyl-[acyl-carrier-protein] desaturase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 1OQ7_B 1AFR_A 2XZ0_B 1OQB_A 2J2F_E 1OQ4_B 1OQ9_A 2XZ1_A 1ZA0_A.
Probab=23.69 E-value=66 Score=27.95 Aligned_cols=63 Identities=21% Similarity=0.139 Sum_probs=38.6
Q ss_pred ecCCCCCCCCCCCC------------CCCCChHHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchhee
Q 024796 8 LHQRGAGKSTPHAC------------LDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGL 72 (262)
Q Consensus 8 ~D~rG~G~S~~~~~------------~~~~~~~~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~l 72 (262)
+.+|||+-.++..+ ..-|+..++.+=+..+++.++|.+.. |.|=.|-=|+.|.+..|.|++++
T Consensus 231 f~MPg~~m~dg~d~~lF~~~~a~~a~~GvY~~~dy~dI~~~l~~~W~i~~~~--gL~~eg~~Ard~l~~l~~r~~r~ 305 (330)
T PF03405_consen 231 FRMPGHLMPDGRDPDLFERFSAVAARAGVYTPRDYADILEPLLRRWKIESRT--GLSGEGEKARDYLCALPARLRRF 305 (330)
T ss_dssp ---TTTT---SS-TTHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHTTGGG----S--HHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcchhcccCcchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCccc--CCChHHHHHHHHHHhhHHHHHHH
Confidence 67888876542111 01245556776556789999998776 99999999999999999999875
No 307
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=23.14 E-value=2.7e+02 Score=26.67 Aligned_cols=58 Identities=19% Similarity=0.174 Sum_probs=33.8
Q ss_pred ceeEEeeCCCC-CCCChhHHHHHh---hC-------CCCeEEEeCCCCCCCCchhHHHHHHHHHHHHHHH
Q 024796 199 NATIVQGRYDV-CCPMMSAWDLHK---AW-------PEADFKVVADAGHSANEPGIAAELVATNEKLKNL 257 (262)
Q Consensus 199 P~Lvi~G~~D~-~~~~~~~~~~~~---~~-------p~~~~~~i~~aGH~~~~~~~~~~~~~~~~~~~~~ 257 (262)
-+||+.+++|. +.+...+..+++ .. +..=+.+-.+|||..-.+ ..+++-|+-..|.-+
T Consensus 634 S~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~-~~k~~~E~a~~yaFl 702 (712)
T KOG2237|consen 634 SMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKP-RFKQIEEAAFRYAFL 702 (712)
T ss_pred ceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCc-hHHHHHHHHHHHHHH
Confidence 35788999855 666555544443 22 223467779999998644 344444544444333
No 308
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=23.13 E-value=1.3e+02 Score=28.44 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=24.8
Q ss_pred CCceEEEEe------ChhHHHHHHHHHhCccchheeeEecc
Q 024796 43 IPEWQVFGG------SWGSTLALAYSLAHPDKVTGLVLRGI 77 (262)
Q Consensus 43 i~~~~l~Gh------S~GG~va~~~a~~~p~rv~~lVl~~~ 77 (262)
.+++.++|| +.|+.+++..-+.--.+ .+-++.++
T Consensus 337 ~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 337 SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 789999999 78999999876555555 44445443
No 309
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.07 E-value=1.1e+02 Score=22.76 Aligned_cols=31 Identities=19% Similarity=0.036 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHH
Q 024796 29 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLAL 59 (262)
Q Consensus 29 ~~~~dl~~l~~~l~i~~~~l~GhS~GG~va~ 59 (262)
+....++-....||.+.+.++||+-=|.+..
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~a 71 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLTF 71 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceEe
Confidence 3566677778899999999999986555543
No 310
>COG4099 Predicted peptidase [General function prediction only]
Probab=22.86 E-value=50 Score=28.37 Aligned_cols=26 Identities=8% Similarity=0.180 Sum_probs=21.2
Q ss_pred hcccccCCceeEEeeCCCCCCCChhH
Q 024796 191 NIDNIRHINATIVQGRYDVCCPMMSA 216 (262)
Q Consensus 191 ~l~~i~~~P~Lvi~G~~D~~~~~~~~ 216 (262)
.++.+++.|..|+|+++|.++|.+.+
T Consensus 309 lv~~lk~~piWvfhs~dDkv~Pv~nS 334 (387)
T COG4099 309 LVRTLKKAPIWVFHSSDDKVIPVSNS 334 (387)
T ss_pred hhhhhccCceEEEEecCCCccccCcc
Confidence 34555578999999999999998765
No 311
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=22.65 E-value=2.6e+02 Score=22.59 Aligned_cols=48 Identities=13% Similarity=0.158 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCC---ceEEEEeChhHHHHHHHHHh---------Cc-cchheeeEecc
Q 024796 30 LIDDIEKLRQHLEIP---EWQVFGGSWGSTLALAYSLA---------HP-DKVTGLVLRGI 77 (262)
Q Consensus 30 ~~~dl~~l~~~l~i~---~~~l~GhS~GG~va~~~a~~---------~p-~rv~~lVl~~~ 77 (262)
.++.+...+....-+ ++.+-..|.||...+..... .+ .+++++|+-++
T Consensus 50 ~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~ 110 (240)
T PF05705_consen 50 AADKLLELLSDSQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSC 110 (240)
T ss_pred HHHHHHHHhhhhccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCC
Confidence 455555555444333 78999999988887776551 11 24888887554
No 312
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=22.35 E-value=2.2e+02 Score=22.83 Aligned_cols=42 Identities=17% Similarity=0.044 Sum_probs=31.9
Q ss_pred CCceeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCC-CCCC
Q 024796 197 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADA-GHSA 238 (262)
Q Consensus 197 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~a-GH~~ 238 (262)
..|.+.+.|..+.....+....+.+-+.+.-+.+++.+ ++..
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~~~~~~ 95 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDRDCGSA 95 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECCCcccc
Confidence 57999999999986555666777777888888888877 4433
No 313
>PRK06100 DNA polymerase III subunit psi; Provisional
Probab=22.28 E-value=1e+02 Score=22.89 Aligned_cols=22 Identities=27% Similarity=0.857 Sum_probs=18.0
Q ss_pred HHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchhe
Q 024796 35 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTG 71 (262)
Q Consensus 35 ~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~ 71 (262)
+.+++++||.+|.+ ++|++.+|
T Consensus 6 d~~LqqMGItqW~L---------------r~P~~L~g 27 (132)
T PRK06100 6 KQYLQEMGISQWEL---------------IHPERLAG 27 (132)
T ss_pred HHHHHHcCCceEEe---------------cCCccccC
Confidence 35789999999987 78887776
No 314
>PRK14567 triosephosphate isomerase; Provisional
Probab=21.89 E-value=63 Score=26.94 Aligned_cols=47 Identities=21% Similarity=0.240 Sum_probs=28.2
Q ss_pred eeEEeeCCCCCCCChhHHHHHhhCCCCeEEEeCCCCCCCCchhHHHHHHHHHHH
Q 024796 200 ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEK 253 (262)
Q Consensus 200 ~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~aGH~~~~~~~~~~~~~~~~~ 253 (262)
+-|++|.. +.++.+.++.+ .++..-.++-++.+ +++.+.+++++.++
T Consensus 203 v~IlYGGS---V~~~N~~~l~~-~~diDG~LVGgasL---~~~~F~~Ii~~~~~ 249 (253)
T PRK14567 203 IKIVYGGS---LKAENAKDILS-LPDVDGGLIGGASL---KAAEFNEIINQANK 249 (253)
T ss_pred ceEEEcCc---CCHHHHHHHHc-CCCCCEEEeehhhh---cHHHHHHHHHHHHh
Confidence 44667753 23444555543 58888888877776 44456666665554
No 315
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=21.14 E-value=69 Score=25.76 Aligned_cols=16 Identities=6% Similarity=0.129 Sum_probs=12.6
Q ss_pred HHHHHhCCCceEEEEeC
Q 024796 36 KLRQHLEIPEWQVFGGS 52 (262)
Q Consensus 36 ~l~~~l~i~~~~l~GhS 52 (262)
..++.+|+ +++|+|||
T Consensus 75 ~mLkd~G~-~~viiGHS 90 (205)
T TIGR00419 75 EMLKDIGA-KGTLINHS 90 (205)
T ss_pred HHHHHcCC-CEEEECcc
Confidence 34677788 59999999
No 316
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=21.12 E-value=57 Score=29.99 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCccchheeeE
Q 024796 31 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 74 (262)
Q Consensus 31 ~~dl~~l~~~l~i~~~~l~GhS~GG~va~~~a~~~p~rv~~lVl 74 (262)
.--+..|.++ ++=+=+|.|-|+||.||-.++.+.-|.+++|.-
T Consensus 190 ~GVlrtL~e~-dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll~ 232 (543)
T KOG2214|consen 190 IGVLRTLLEQ-DLLPNIISGSSAGAIVASLVGVRSNEELKQLLT 232 (543)
T ss_pred HHHHHHHHHc-cccchhhcCCchhHHHHHHHhhcchHHHHHHhc
Confidence 4445556655 333457889999999999999999999888653
No 317
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=20.90 E-value=1.7e+02 Score=22.27 Aligned_cols=9 Identities=0% Similarity=0.095 Sum_probs=4.5
Q ss_pred HHHHHHHhC
Q 024796 34 IEKLRQHLE 42 (262)
Q Consensus 34 l~~l~~~l~ 42 (262)
-..++..+.
T Consensus 56 ~~~il~~~~ 64 (153)
T TIGR00246 56 GDRILAAIG 64 (153)
T ss_pred HHHHHHhCC
Confidence 344555554
No 318
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=20.87 E-value=2e+02 Score=24.13 Aligned_cols=43 Identities=16% Similarity=0.186 Sum_probs=27.5
Q ss_pred CCceeEEeeCCCC---------CCCCh-hHHHHHhhCC-CCeEEEeCCCCCCCC
Q 024796 197 HINATIVQGRYDV---------CCPMM-SAWDLHKAWP-EADFKVVADAGHSAN 239 (262)
Q Consensus 197 ~~P~Lvi~G~~D~---------~~~~~-~~~~~~~~~p-~~~~~~i~~aGH~~~ 239 (262)
++|+|||-...+. ..|.. ..+++.+.++ -+-..+.++.||+=+
T Consensus 154 ~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~ 207 (259)
T PF12740_consen 154 SMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDF 207 (259)
T ss_pred CCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHh
Confidence 4899999666663 33433 3355655554 455666799999754
No 319
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=20.71 E-value=71 Score=25.68 Aligned_cols=16 Identities=31% Similarity=0.613 Sum_probs=12.4
Q ss_pred HHHHhCCCceEEEEeCh
Q 024796 37 LRQHLEIPEWQVFGGSW 53 (262)
Q Consensus 37 l~~~l~i~~~~l~GhS~ 53 (262)
.+..+|+ .|+|+|||=
T Consensus 81 mlkd~G~-~wVIlGHSE 96 (247)
T KOG1643|consen 81 MLKDLGA-EWVILGHSE 96 (247)
T ss_pred HHHhCCC-CEEEecchh
Confidence 4566787 499999994
No 320
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=20.27 E-value=1.5e+02 Score=22.62 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=24.7
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-CceEEEEeChh
Q 024796 3 VQEEALHQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGSWG 54 (262)
Q Consensus 3 ~~~~~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~i-~~~~l~GhS~G 54 (262)
..+|++|-+|- ..+..++++-|....+. |. +=+.++|-|.|
T Consensus 68 ~~~i~Ld~~Gk----------~~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 68 DYVILLDERGK----------QLSSEEFAKKLERWMNQ-GKSDIVFIIGGADG 109 (155)
T ss_dssp SEEEEE-TTSE----------E--HHHHHHHHHHHHHT-TS-EEEEEE-BTTB
T ss_pred CEEEEEcCCCc----------cCChHHHHHHHHHHHhc-CCceEEEEEecCCC
Confidence 45777787773 23445677777777666 44 33568898888
Done!