Query 024797
Match_columns 262
No_of_seqs 233 out of 2732
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 14:35:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024797.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024797hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ri5_A MRNA capping enzyme; me 99.9 1.6E-22 5.6E-27 169.7 20.4 178 62-259 42-219 (298)
2 3bgv_A MRNA CAP guanine-N7 met 99.9 6.9E-22 2.4E-26 167.5 17.6 188 61-256 4-199 (313)
3 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.9E-21 6.6E-26 160.4 15.8 141 40-206 35-178 (261)
4 1pjz_A Thiopurine S-methyltran 99.8 1.4E-20 4.8E-25 149.7 11.5 127 71-205 9-139 (203)
5 2vdw_A Vaccinia virus capping 99.8 2.1E-20 7.2E-25 157.4 13.0 144 66-214 23-177 (302)
6 4hg2_A Methyltransferase type 99.8 1.4E-20 4.8E-25 154.8 10.2 128 38-207 9-136 (257)
7 3h2b_A SAM-dependent methyltra 99.8 3.4E-20 1.2E-24 147.1 8.4 141 35-209 4-144 (203)
8 4htf_A S-adenosylmethionine-de 99.8 2.8E-19 9.6E-24 149.3 14.1 152 36-211 26-178 (285)
9 1xtp_A LMAJ004091AAA; SGPP, st 99.8 6E-19 2.1E-23 144.6 15.5 122 68-207 77-198 (254)
10 3dtn_A Putative methyltransfer 99.8 2.2E-19 7.7E-24 145.5 12.7 140 38-207 8-149 (234)
11 3hnr_A Probable methyltransfer 99.8 3.8E-19 1.3E-23 142.8 12.6 142 37-208 6-147 (220)
12 3l8d_A Methyltransferase; stru 99.8 2.8E-19 9.6E-24 145.5 11.8 141 35-208 15-155 (242)
13 1y8c_A S-adenosylmethionine-de 99.8 2.2E-18 7.7E-23 140.3 16.4 147 39-213 2-149 (246)
14 2yqz_A Hypothetical protein TT 99.8 1.4E-18 4.7E-23 143.1 14.8 139 38-207 3-142 (263)
15 3dlc_A Putative S-adenosyl-L-m 99.8 4E-19 1.4E-23 142.1 11.3 118 72-207 32-149 (219)
16 2p7i_A Hypothetical protein; p 99.8 5.2E-19 1.8E-23 144.2 12.1 106 83-212 41-147 (250)
17 3thr_A Glycine N-methyltransfe 99.8 1.7E-18 5.7E-23 145.1 14.8 135 67-215 43-184 (293)
18 2gs9_A Hypothetical protein TT 99.8 2.4E-19 8.2E-24 143.1 9.1 110 74-210 27-136 (211)
19 3bus_A REBM, methyltransferase 99.8 6.7E-19 2.3E-23 146.0 12.2 119 72-207 49-167 (273)
20 3e23_A Uncharacterized protein 99.8 9.8E-19 3.4E-23 139.5 12.7 132 34-207 11-142 (211)
21 2gb4_A Thiopurine S-methyltran 99.8 1.2E-18 4.2E-23 142.9 13.3 116 83-205 67-190 (252)
22 3g5l_A Putative S-adenosylmeth 99.8 6.7E-19 2.3E-23 144.4 11.7 109 82-211 42-150 (253)
23 1vl5_A Unknown conserved prote 99.8 7.9E-19 2.7E-23 144.6 12.1 112 76-206 29-140 (260)
24 2ex4_A Adrenal gland protein A 99.8 5.2E-18 1.8E-22 138.2 16.0 108 84-207 79-186 (241)
25 3bkw_A MLL3908 protein, S-aden 99.8 8.8E-19 3E-23 142.6 11.3 109 81-210 40-148 (243)
26 3jwh_A HEN1; methyltransferase 99.8 5.1E-18 1.8E-22 136.0 15.1 122 76-209 21-143 (217)
27 3kkz_A Uncharacterized protein 99.8 2.7E-18 9.3E-23 142.0 13.9 108 82-207 44-151 (267)
28 3ou2_A SAM-dependent methyltra 99.8 2.8E-18 9.7E-23 137.2 13.5 106 82-209 44-149 (218)
29 3ege_A Putative methyltransfer 99.8 6.8E-19 2.3E-23 145.2 9.7 129 39-208 4-132 (261)
30 1wzn_A SAM-dependent methyltra 99.8 2.2E-18 7.5E-23 141.2 12.7 123 68-209 25-148 (252)
31 1nkv_A Hypothetical protein YJ 99.8 1.4E-18 4.6E-23 142.7 11.4 117 73-207 25-141 (256)
32 3d2l_A SAM-dependent methyltra 99.8 3.1E-18 1.1E-22 139.3 13.5 141 39-213 3-144 (243)
33 3jwg_A HEN1, methyltransferase 99.8 5.8E-18 2E-22 135.8 14.7 117 80-208 25-142 (219)
34 3ujc_A Phosphoethanolamine N-m 99.8 1.6E-18 5.5E-23 142.9 11.7 117 73-207 44-160 (266)
35 3ofk_A Nodulation protein S; N 99.8 4.6E-18 1.6E-22 136.1 13.9 111 81-210 48-158 (216)
36 2avn_A Ubiquinone/menaquinone 99.8 1.1E-17 3.9E-22 137.8 16.4 142 35-211 16-157 (260)
37 2a14_A Indolethylamine N-methy 99.8 2.7E-18 9.2E-23 141.9 12.4 136 69-206 37-197 (263)
38 2o57_A Putative sarcosine dime 99.8 2.2E-18 7.4E-23 144.7 11.9 118 73-207 67-188 (297)
39 3iv6_A Putative Zn-dependent a 99.8 1.3E-18 4.4E-23 142.8 10.2 141 36-208 10-150 (261)
40 3f4k_A Putative methyltransfer 99.8 3.8E-18 1.3E-22 140.1 12.7 108 82-207 44-151 (257)
41 2p8j_A S-adenosylmethionine-de 99.8 9.2E-18 3.2E-22 133.5 13.3 111 82-209 21-131 (209)
42 2pxx_A Uncharacterized protein 99.8 1.4E-17 4.6E-22 132.9 14.0 120 83-218 41-171 (215)
43 3dh0_A SAM dependent methyltra 99.8 4.7E-18 1.6E-22 136.2 11.3 115 75-207 28-144 (219)
44 3hem_A Cyclopropane-fatty-acyl 99.8 8E-18 2.7E-22 141.7 13.1 120 72-207 60-184 (302)
45 1xxl_A YCGJ protein; structura 99.8 6.7E-18 2.3E-22 137.4 11.8 113 76-207 13-125 (239)
46 3e8s_A Putative SAM dependent 99.8 4.5E-18 1.5E-22 136.7 10.6 146 34-210 11-156 (227)
47 2g72_A Phenylethanolamine N-me 99.7 2.3E-17 7.9E-22 138.0 15.1 122 84-205 71-214 (289)
48 3pfg_A N-methyltransferase; N, 99.7 1E-17 3.4E-22 138.2 12.0 103 83-207 49-152 (263)
49 3dli_A Methyltransferase; PSI- 99.7 7.7E-18 2.6E-22 137.1 11.2 104 83-211 40-145 (240)
50 3g2m_A PCZA361.24; SAM-depende 99.7 2.9E-17 1E-21 138.0 14.2 125 72-212 71-196 (299)
51 3bxo_A N,N-dimethyltransferase 99.7 1.5E-17 5E-22 135.0 11.8 105 83-209 39-144 (239)
52 3vc1_A Geranyl diphosphate 2-C 99.7 1.6E-17 5.3E-22 140.6 12.3 108 82-207 115-222 (312)
53 1kpg_A CFA synthase;, cyclopro 99.7 1.8E-17 6.2E-22 138.4 12.4 118 73-208 53-170 (287)
54 3ccf_A Cyclopropane-fatty-acyl 99.7 1.2E-17 4.1E-22 139.0 11.1 109 76-209 49-157 (279)
55 4fsd_A Arsenic methyltransfera 99.7 8.3E-18 2.8E-22 146.2 10.2 115 82-206 81-203 (383)
56 3p9n_A Possible methyltransfer 99.7 7.2E-17 2.5E-21 126.6 14.1 112 83-209 43-156 (189)
57 1ve3_A Hypothetical protein PH 99.7 6.1E-17 2.1E-21 130.3 14.0 111 83-211 37-147 (227)
58 1zx0_A Guanidinoacetate N-meth 99.7 2E-17 6.7E-22 134.4 11.1 110 82-206 58-170 (236)
59 3orh_A Guanidinoacetate N-meth 99.7 7.6E-18 2.6E-22 136.9 8.4 108 82-206 58-170 (236)
60 3lcc_A Putative methyl chlorid 99.7 1.5E-17 5.2E-22 134.8 10.2 117 73-207 56-172 (235)
61 3mti_A RRNA methylase; SAM-dep 99.7 5.6E-17 1.9E-21 126.7 13.0 126 67-207 6-136 (185)
62 2p35_A Trans-aconitate 2-methy 99.7 2.1E-17 7E-22 135.8 10.9 111 74-208 23-134 (259)
63 1vlm_A SAM-dependent methyltra 99.7 4.2E-17 1.4E-21 130.9 12.4 132 35-210 12-143 (219)
64 3mgg_A Methyltransferase; NYSG 99.7 2.1E-17 7.3E-22 137.1 11.0 109 82-208 35-144 (276)
65 2xvm_A Tellurite resistance pr 99.7 3.7E-17 1.3E-21 128.8 11.7 108 81-206 29-136 (199)
66 3g5t_A Trans-aconitate 3-methy 99.7 3.5E-17 1.2E-21 137.6 12.2 112 81-204 33-147 (299)
67 3gu3_A Methyltransferase; alph 99.7 4.1E-17 1.4E-21 136.2 12.4 107 82-208 20-128 (284)
68 3ggd_A SAM-dependent methyltra 99.7 1.9E-17 6.4E-22 135.1 9.8 112 82-208 54-165 (245)
69 3fpf_A Mtnas, putative unchara 99.7 1.4E-16 4.9E-21 132.0 14.9 114 72-208 110-224 (298)
70 3ocj_A Putative exported prote 99.7 6.3E-17 2.2E-21 136.4 13.0 113 80-207 114-228 (305)
71 2fk8_A Methoxy mycolic acid sy 99.7 5.8E-17 2E-21 137.4 12.3 118 73-208 79-196 (318)
72 3i9f_A Putative type 11 methyl 99.7 1.9E-17 6.5E-22 127.5 8.5 102 80-208 13-114 (170)
73 3sm3_A SAM-dependent methyltra 99.7 1.2E-16 4.1E-21 129.1 13.5 116 82-208 28-143 (235)
74 3htx_A HEN1; HEN1, small RNA m 99.7 1.7E-16 5.8E-21 146.0 16.0 134 66-210 703-838 (950)
75 3m70_A Tellurite resistance pr 99.7 7.4E-17 2.5E-21 134.6 12.4 106 82-206 118-223 (286)
76 2i62_A Nicotinamide N-methyltr 99.7 9.6E-17 3.3E-21 132.1 12.9 123 83-206 55-198 (265)
77 3g07_A 7SK snRNA methylphospha 99.7 7.4E-17 2.5E-21 135.2 12.3 127 84-210 46-224 (292)
78 3cgg_A SAM-dependent methyltra 99.7 2.3E-16 8E-21 123.6 14.2 106 82-209 44-150 (195)
79 3eey_A Putative rRNA methylase 99.7 1.8E-16 6.2E-21 125.0 13.5 127 68-207 7-140 (197)
80 2aot_A HMT, histamine N-methyl 99.7 6.3E-17 2.2E-21 135.6 10.9 115 83-209 51-175 (292)
81 3njr_A Precorrin-6Y methylase; 99.7 7.8E-16 2.7E-20 122.3 16.5 114 76-212 47-160 (204)
82 2kw5_A SLR1183 protein; struct 99.7 1.9E-16 6.6E-21 125.3 12.2 107 83-210 29-135 (202)
83 1dus_A MJ0882; hypothetical pr 99.7 5.4E-16 1.8E-20 121.4 14.4 122 71-210 39-161 (194)
84 3hm2_A Precorrin-6Y C5,15-meth 99.7 5.1E-16 1.8E-20 120.1 13.7 119 72-211 13-132 (178)
85 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.8E-16 6.1E-21 127.2 11.1 117 82-212 32-156 (218)
86 2fca_A TRNA (guanine-N(7)-)-me 99.7 4.9E-16 1.7E-20 124.3 12.9 118 82-211 36-158 (213)
87 2fyt_A Protein arginine N-meth 99.7 4.5E-16 1.6E-20 133.1 13.1 119 70-203 50-168 (340)
88 2qe6_A Uncharacterized protein 99.7 9.1E-16 3.1E-20 127.3 14.6 125 70-208 62-198 (274)
89 3lbf_A Protein-L-isoaspartate 99.7 5.6E-16 1.9E-20 123.4 12.4 111 73-208 66-176 (210)
90 3e05_A Precorrin-6Y C5,15-meth 99.7 1.3E-15 4.4E-20 120.8 14.4 114 76-210 32-146 (204)
91 3bkx_A SAM-dependent methyltra 99.7 4.9E-16 1.7E-20 128.8 12.0 119 72-207 31-160 (275)
92 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1.3E-15 4.6E-20 121.7 14.1 116 82-211 39-161 (214)
93 2ift_A Putative methylase HI07 99.7 3.7E-16 1.3E-20 123.9 10.5 111 84-210 53-167 (201)
94 4df3_A Fibrillarin-like rRNA/T 99.7 4.5E-16 1.5E-20 125.2 11.0 109 79-206 72-182 (233)
95 2y1w_A Histone-arginine methyl 99.7 6.3E-16 2.2E-20 132.6 12.4 121 69-206 35-155 (348)
96 4e2x_A TCAB9; kijanose, tetron 99.7 1E-16 3.5E-21 140.8 7.3 124 70-214 93-216 (416)
97 3q7e_A Protein arginine N-meth 99.7 4.5E-16 1.5E-20 133.6 11.0 117 73-204 55-171 (349)
98 2esr_A Methyltransferase; stru 99.7 6.4E-16 2.2E-20 119.7 10.8 110 83-210 30-142 (177)
99 3cc8_A Putative methyltransfer 99.7 2.9E-16 1E-20 126.3 9.1 102 83-210 31-134 (230)
100 3uwp_A Histone-lysine N-methyl 99.6 9.2E-16 3.2E-20 131.9 11.8 129 68-205 157-287 (438)
101 3r0q_C Probable protein argini 99.6 6.6E-16 2.2E-20 133.8 10.7 121 69-205 48-168 (376)
102 1af7_A Chemotaxis receptor met 99.6 9E-16 3.1E-20 126.9 10.7 116 84-205 105-251 (274)
103 3evz_A Methyltransferase; NYSG 99.6 2.7E-15 9.1E-20 121.1 13.2 116 80-209 51-182 (230)
104 1l3i_A Precorrin-6Y methyltran 99.6 4.3E-15 1.5E-19 116.0 13.7 116 76-212 25-140 (192)
105 1g6q_1 HnRNP arginine N-methyl 99.6 1.9E-15 6.5E-20 128.6 12.3 119 70-203 24-142 (328)
106 3grz_A L11 mtase, ribosomal pr 99.6 1.3E-15 4.4E-20 120.9 10.5 103 82-207 58-160 (205)
107 3ckk_A TRNA (guanine-N(7)-)-me 99.6 2.8E-15 9.5E-20 121.6 12.5 123 82-212 44-174 (235)
108 2fpo_A Methylase YHHF; structu 99.6 1.6E-15 5.6E-20 120.2 10.9 107 84-209 54-163 (202)
109 3dp7_A SAM-dependent methyltra 99.6 6.1E-15 2.1E-19 127.2 15.2 109 81-206 176-287 (363)
110 1nt2_A Fibrillarin-like PRE-rR 99.6 2.1E-15 7.3E-20 120.3 11.1 107 82-207 55-162 (210)
111 2fhp_A Methylase, putative; al 99.6 1.2E-15 4E-20 119.0 9.2 114 83-210 43-158 (187)
112 1vbf_A 231AA long hypothetical 99.6 4.8E-15 1.6E-19 119.7 13.1 110 73-209 59-168 (231)
113 3fzg_A 16S rRNA methylase; met 99.6 8.5E-16 2.9E-20 118.6 8.0 102 83-204 48-150 (200)
114 2yxd_A Probable cobalt-precorr 99.6 6.7E-15 2.3E-19 114.1 13.3 111 76-212 27-137 (183)
115 3dmg_A Probable ribosomal RNA 99.6 7.3E-15 2.5E-19 127.2 14.8 111 83-209 232-343 (381)
116 3lpm_A Putative methyltransfer 99.6 3.5E-15 1.2E-19 122.8 12.2 114 84-208 49-178 (259)
117 2r3s_A Uncharacterized protein 99.6 6.6E-15 2.2E-19 125.5 14.1 116 75-207 154-272 (335)
118 1p91_A Ribosomal RNA large sub 99.6 5.2E-15 1.8E-19 122.2 12.9 100 83-212 84-184 (269)
119 3gdh_A Trimethylguanosine synt 99.6 1E-16 3.5E-21 130.5 2.4 104 83-205 77-180 (241)
120 1xdz_A Methyltransferase GIDB; 99.6 2.2E-15 7.6E-20 122.6 10.1 105 83-206 69-174 (240)
121 3mcz_A O-methyltransferase; ad 99.6 7.8E-15 2.7E-19 125.9 13.2 116 76-206 170-287 (352)
122 2yxe_A Protein-L-isoaspartate 99.6 6.4E-15 2.2E-19 117.6 11.6 112 74-209 67-180 (215)
123 1jsx_A Glucose-inhibited divis 99.6 3.2E-14 1.1E-18 112.8 15.1 101 84-207 65-166 (207)
124 1qzz_A RDMB, aclacinomycin-10- 99.6 9.2E-15 3.1E-19 126.5 12.7 114 76-207 174-288 (374)
125 3gwz_A MMCR; methyltransferase 99.6 2.2E-14 7.4E-19 124.0 15.0 107 82-206 200-307 (369)
126 4dcm_A Ribosomal RNA large sub 99.6 4.8E-15 1.6E-19 128.2 10.8 124 74-209 212-337 (375)
127 3i53_A O-methyltransferase; CO 99.6 7.3E-15 2.5E-19 125.2 11.6 106 84-207 169-275 (332)
128 3b3j_A Histone-arginine methyl 99.6 4.1E-15 1.4E-19 132.4 10.2 116 73-205 147-262 (480)
129 3m33_A Uncharacterized protein 99.6 1.3E-15 4.5E-20 122.8 6.4 107 82-218 46-156 (226)
130 1x19_A CRTF-related protein; m 99.6 2.5E-14 8.7E-19 123.1 14.8 113 76-206 182-295 (359)
131 3g89_A Ribosomal RNA small sub 99.6 1.9E-14 6.4E-19 117.7 13.3 106 83-207 79-185 (249)
132 3u81_A Catechol O-methyltransf 99.6 1.5E-14 5.3E-19 116.1 12.3 123 83-218 57-185 (221)
133 1dl5_A Protein-L-isoaspartate 99.6 1.5E-14 5.1E-19 122.5 12.7 113 73-209 64-178 (317)
134 1fbn_A MJ fibrillarin homologu 99.6 7.7E-15 2.6E-19 118.6 10.4 103 81-206 71-178 (230)
135 3sso_A Methyltransferase; macr 99.6 8E-15 2.7E-19 125.7 10.8 136 36-206 180-324 (419)
136 2pjd_A Ribosomal RNA small sub 99.6 5.5E-15 1.9E-19 126.5 9.8 121 72-209 184-306 (343)
137 3mq2_A 16S rRNA methyltransfer 99.6 7.2E-15 2.5E-19 117.6 9.8 116 76-206 19-140 (218)
138 4hc4_A Protein arginine N-meth 99.6 8.2E-15 2.8E-19 126.0 10.8 119 70-204 69-187 (376)
139 3tma_A Methyltransferase; thum 99.6 4.4E-14 1.5E-18 121.5 15.4 124 75-212 194-323 (354)
140 1u2z_A Histone-lysine N-methyl 99.6 1.8E-14 6E-19 126.0 12.9 121 70-205 228-358 (433)
141 3ntv_A MW1564 protein; rossman 99.6 1.8E-14 6.2E-19 116.6 11.9 105 82-205 69-175 (232)
142 1tw3_A COMT, carminomycin 4-O- 99.6 2.3E-14 7.8E-19 123.4 12.9 115 76-208 175-290 (360)
143 2zfu_A Nucleomethylin, cerebra 99.6 4.4E-15 1.5E-19 118.6 7.9 88 83-208 66-153 (215)
144 3p2e_A 16S rRNA methylase; met 99.6 8.5E-15 2.9E-19 118.0 9.3 111 81-204 21-137 (225)
145 1yb2_A Hypothetical protein TA 99.6 1.2E-14 4.2E-19 120.6 10.4 112 76-211 102-216 (275)
146 3id6_C Fibrillarin-like rRNA/T 99.6 1.6E-14 5.4E-19 116.4 10.7 109 80-207 72-182 (232)
147 2ip2_A Probable phenazine-spec 99.6 3E-14 1E-18 121.4 12.8 103 86-206 169-272 (334)
148 3mb5_A SAM-dependent methyltra 99.6 2.8E-14 9.7E-19 116.9 12.2 115 75-212 84-200 (255)
149 4dzr_A Protein-(glutamine-N5) 99.6 1.6E-15 5.5E-20 120.7 4.5 124 73-207 18-166 (215)
150 1ne2_A Hypothetical protein TA 99.6 1.4E-13 4.7E-18 108.7 15.6 102 82-209 49-150 (200)
151 1ws6_A Methyltransferase; stru 99.6 1.2E-14 4.2E-19 111.5 9.3 109 84-210 41-151 (171)
152 2frn_A Hypothetical protein PH 99.6 3E-14 1E-18 118.5 12.3 105 82-208 123-227 (278)
153 3dr5_A Putative O-methyltransf 99.6 1.4E-14 4.6E-19 116.5 9.8 103 85-205 57-162 (221)
154 1jg1_A PIMT;, protein-L-isoasp 99.6 2.6E-14 8.9E-19 115.8 11.6 113 73-209 80-192 (235)
155 2pwy_A TRNA (adenine-N(1)-)-me 99.6 3.2E-14 1.1E-18 116.7 12.1 117 75-213 87-205 (258)
156 1i9g_A Hypothetical protein RV 99.6 1.8E-14 6.1E-19 119.7 10.7 118 75-213 90-210 (280)
157 3tfw_A Putative O-methyltransf 99.6 4.3E-14 1.5E-18 115.6 12.6 108 82-207 61-171 (248)
158 1o9g_A RRNA methyltransferase; 99.6 2.5E-14 8.5E-19 117.0 11.1 133 73-205 40-213 (250)
159 2ipx_A RRNA 2'-O-methyltransfe 99.5 2.5E-14 8.6E-19 115.7 11.0 109 81-208 74-184 (233)
160 2yvl_A TRMI protein, hypotheti 99.5 8.3E-14 2.8E-18 113.5 13.4 116 76-214 83-198 (248)
161 2vdv_E TRNA (guanine-N(7)-)-me 99.5 6.3E-14 2.1E-18 114.4 12.6 122 83-210 48-177 (246)
162 2pbf_A Protein-L-isoaspartate 99.5 2.5E-14 8.6E-19 115.2 10.0 108 82-208 78-195 (227)
163 1i1n_A Protein-L-isoaspartate 99.5 4.2E-14 1.4E-18 113.8 11.2 109 82-209 75-185 (226)
164 3adn_A Spermidine synthase; am 99.5 9.6E-14 3.3E-18 116.1 13.6 115 82-206 81-198 (294)
165 2b3t_A Protein methyltransfera 99.5 6.5E-14 2.2E-18 116.2 12.4 111 83-208 108-240 (276)
166 2b25_A Hypothetical protein; s 99.5 8.8E-14 3E-18 118.7 13.1 125 76-214 97-227 (336)
167 2ozv_A Hypothetical protein AT 99.5 4.7E-14 1.6E-18 116.1 11.0 123 82-209 34-173 (260)
168 3giw_A Protein of unknown func 99.5 8.5E-14 2.9E-18 114.1 12.3 127 68-206 61-200 (277)
169 2gpy_A O-methyltransferase; st 99.5 4.7E-14 1.6E-18 114.1 10.6 107 82-206 52-160 (233)
170 3duw_A OMT, O-methyltransferas 99.5 6.9E-14 2.4E-18 112.3 10.9 111 82-207 56-168 (223)
171 3bwc_A Spermidine synthase; SA 99.5 9E-14 3.1E-18 117.0 12.1 116 83-208 94-212 (304)
172 2nxc_A L11 mtase, ribosomal pr 99.5 5.9E-14 2E-18 115.1 10.6 102 82-207 118-219 (254)
173 3q87_B N6 adenine specific DNA 99.5 2.7E-14 9.3E-19 110.0 8.0 99 83-208 22-125 (170)
174 3hp7_A Hemolysin, putative; st 99.5 3.5E-14 1.2E-18 117.8 9.1 109 74-205 74-184 (291)
175 1r18_A Protein-L-isoaspartate( 99.5 4.1E-14 1.4E-18 114.0 9.4 117 73-208 71-196 (227)
176 2igt_A SAM dependent methyltra 99.5 9.1E-14 3.1E-18 118.2 11.8 115 83-207 152-273 (332)
177 3tr6_A O-methyltransferase; ce 99.5 6.2E-14 2.1E-18 112.6 10.2 110 83-207 63-175 (225)
178 1g8a_A Fibrillarin-like PRE-rR 99.5 8.8E-14 3E-18 112.0 11.1 106 82-206 71-178 (227)
179 1ej0_A FTSJ; methyltransferase 99.5 3.8E-14 1.3E-18 109.0 8.1 103 82-209 20-139 (180)
180 1wy7_A Hypothetical protein PH 99.5 7.1E-13 2.4E-17 105.0 15.6 106 82-209 47-152 (207)
181 3lec_A NADB-rossmann superfami 99.5 2.7E-13 9.3E-18 108.6 13.2 121 82-221 19-140 (230)
182 3lst_A CALO1 methyltransferase 99.5 1.1E-13 3.7E-18 118.7 11.3 109 77-206 177-286 (348)
183 3bzb_A Uncharacterized protein 99.5 1.9E-13 6.5E-18 113.8 12.5 117 82-206 77-205 (281)
184 3r3h_A O-methyltransferase, SA 99.5 2.3E-14 7.9E-19 116.7 6.6 108 83-206 59-170 (242)
185 1ixk_A Methyltransferase; open 99.5 1.4E-13 4.8E-18 116.4 11.7 114 80-207 114-247 (315)
186 1nv8_A HEMK protein; class I a 99.5 1.2E-13 4E-18 115.2 10.8 122 73-209 112-252 (284)
187 2bm8_A Cephalosporin hydroxyla 99.5 5E-14 1.7E-18 114.3 8.1 99 83-206 80-187 (236)
188 1o54_A SAM-dependent O-methylt 99.5 1.4E-13 4.7E-18 114.3 10.9 113 76-211 104-218 (277)
189 3gnl_A Uncharacterized protein 99.5 4.4E-13 1.5E-17 108.3 13.4 121 82-221 19-140 (244)
190 2plw_A Ribosomal RNA methyltra 99.5 1.5E-13 5E-18 108.5 10.4 107 82-208 20-156 (201)
191 3kr9_A SAM-dependent methyltra 99.5 4E-13 1.4E-17 107.5 12.7 121 82-221 13-134 (225)
192 3p9c_A Caffeic acid O-methyltr 99.5 1.7E-13 5.8E-18 118.2 11.3 99 82-206 199-298 (364)
193 3reo_A (ISO)eugenol O-methyltr 99.5 1.3E-13 4.4E-18 119.2 10.5 98 83-206 202-300 (368)
194 3ajd_A Putative methyltransfer 99.5 9.4E-14 3.2E-18 115.2 9.2 117 81-207 80-212 (274)
195 2b78_A Hypothetical protein SM 99.5 1.8E-13 6.2E-18 118.8 11.1 118 83-209 211-334 (385)
196 4azs_A Methyltransferase WBDD; 99.5 7.8E-14 2.7E-18 127.0 8.8 105 83-204 65-171 (569)
197 3c3p_A Methyltransferase; NP_9 99.5 2E-13 6.8E-18 108.6 10.1 103 83-206 55-160 (210)
198 1fp1_D Isoliquiritigenin 2'-O- 99.5 1.4E-13 4.7E-18 119.1 9.9 97 83-205 208-305 (372)
199 3gjy_A Spermidine synthase; AP 99.5 2.1E-13 7.3E-18 114.4 10.5 110 86-207 91-201 (317)
200 1mjf_A Spermidine synthase; sp 99.5 1.4E-13 4.8E-18 114.5 9.4 118 82-207 73-194 (281)
201 2hnk_A SAM-dependent O-methylt 99.5 2.1E-13 7.3E-18 110.7 10.2 110 82-206 58-181 (239)
202 3tm4_A TRNA (guanine N2-)-meth 99.5 6.9E-13 2.4E-17 114.7 13.8 121 82-217 215-340 (373)
203 3a27_A TYW2, uncharacterized p 99.5 2E-13 6.7E-18 113.1 9.8 103 82-207 117-220 (272)
204 1sui_A Caffeoyl-COA O-methyltr 99.5 2.2E-13 7.4E-18 111.3 9.5 109 83-206 78-190 (247)
205 2oxt_A Nucleoside-2'-O-methylt 99.4 5.1E-14 1.7E-18 116.0 5.3 114 76-208 66-187 (265)
206 1iy9_A Spermidine synthase; ro 99.4 2.8E-13 9.6E-18 112.3 9.8 117 83-208 74-191 (275)
207 2wa2_A Non-structural protein 99.4 5E-14 1.7E-18 116.7 5.2 109 82-208 80-195 (276)
208 2i7c_A Spermidine synthase; tr 99.4 3.4E-13 1.2E-17 112.3 10.2 116 82-208 76-194 (283)
209 1fp2_A Isoflavone O-methyltran 99.4 3.2E-13 1.1E-17 115.9 10.3 99 82-206 186-288 (352)
210 4a6d_A Hydroxyindole O-methylt 99.4 1.3E-12 4.3E-17 112.3 14.0 106 82-206 177-283 (353)
211 3v97_A Ribosomal RNA large sub 99.4 7.3E-13 2.5E-17 123.0 13.2 113 83-208 538-659 (703)
212 1xj5_A Spermidine synthase 1; 99.4 4E-13 1.4E-17 114.2 10.6 115 83-206 119-235 (334)
213 2o07_A Spermidine synthase; st 99.4 4.1E-13 1.4E-17 112.9 10.3 115 82-207 93-210 (304)
214 2b2c_A Spermidine synthase; be 99.4 5.3E-13 1.8E-17 112.5 11.0 115 82-208 106-224 (314)
215 1uir_A Polyamine aminopropyltr 99.4 3.5E-13 1.2E-17 113.8 9.6 114 82-206 75-195 (314)
216 3k6r_A Putative transferase PH 99.4 9.3E-13 3.2E-17 108.8 11.8 102 82-205 123-224 (278)
217 2pt6_A Spermidine synthase; tr 99.4 5.6E-13 1.9E-17 112.8 10.6 115 82-208 114-232 (321)
218 2f8l_A Hypothetical protein LM 99.4 8.2E-13 2.8E-17 113.1 11.5 129 64-209 109-259 (344)
219 3cbg_A O-methyltransferase; cy 99.4 7.6E-13 2.6E-17 107.0 10.7 108 83-206 71-182 (232)
220 1inl_A Spermidine synthase; be 99.4 5E-13 1.7E-17 112.0 9.5 114 83-208 89-207 (296)
221 2h00_A Methyltransferase 10 do 99.4 7.8E-14 2.7E-18 114.3 4.4 108 84-204 65-190 (254)
222 3dou_A Ribosomal RNA large sub 99.4 9.6E-13 3.3E-17 103.2 10.4 107 82-209 23-142 (191)
223 3c3y_A Pfomt, O-methyltransfer 99.4 7.3E-13 2.5E-17 107.5 10.0 109 83-206 69-181 (237)
224 2avd_A Catechol-O-methyltransf 99.4 8.5E-13 2.9E-17 106.2 10.1 109 82-206 67-179 (229)
225 3c0k_A UPF0064 protein YCCW; P 99.4 1.5E-12 5.3E-17 113.4 12.3 117 83-208 219-341 (396)
226 2nyu_A Putative ribosomal RNA 99.4 9.8E-13 3.3E-17 103.2 10.0 108 82-209 20-148 (196)
227 2as0_A Hypothetical protein PH 99.4 7.8E-13 2.7E-17 115.3 9.9 118 83-209 216-338 (396)
228 1zq9_A Probable dimethyladenos 99.4 1.1E-12 3.7E-17 109.4 10.2 113 72-203 16-144 (285)
229 2p41_A Type II methyltransfera 99.4 3.4E-13 1.2E-17 113.3 6.8 107 82-209 80-194 (305)
230 3opn_A Putative hemolysin; str 99.4 1.4E-12 4.6E-17 105.5 10.0 111 73-206 25-137 (232)
231 2yxl_A PH0851 protein, 450AA l 99.4 2.7E-12 9.4E-17 113.6 12.2 115 80-207 255-390 (450)
232 2qm3_A Predicted methyltransfe 99.4 3.8E-12 1.3E-16 110.1 12.7 106 84-208 172-280 (373)
233 4dmg_A Putative uncharacterize 99.4 1.7E-12 5.8E-17 112.7 9.7 111 83-208 213-328 (393)
234 1zg3_A Isoflavanone 4'-O-methy 99.4 1.7E-12 5.7E-17 111.7 9.2 98 83-206 192-293 (358)
235 1wxx_A TT1595, hypothetical pr 99.3 1E-12 3.4E-17 114.1 7.1 114 84-208 209-327 (382)
236 2frx_A Hypothetical protein YE 99.3 6.9E-12 2.4E-16 111.5 12.5 111 84-207 117-247 (479)
237 3lcv_B Sisomicin-gentamicin re 99.3 2.3E-12 8E-17 104.0 8.5 103 83-204 131-234 (281)
238 3frh_A 16S rRNA methylase; met 99.3 3.1E-12 1.1E-16 102.2 8.9 103 83-207 104-206 (253)
239 1sqg_A SUN protein, FMU protei 99.3 6.2E-12 2.1E-16 110.7 11.3 115 80-207 242-375 (429)
240 2ld4_A Anamorsin; methyltransf 99.3 1.2E-12 4.2E-17 101.0 5.9 93 82-207 10-102 (176)
241 3m4x_A NOL1/NOP2/SUN family pr 99.3 3.2E-12 1.1E-16 112.6 9.1 115 80-207 101-235 (456)
242 2h1r_A Dimethyladenosine trans 99.3 1.2E-11 4.2E-16 103.6 12.0 110 72-201 30-154 (299)
243 3m6w_A RRNA methylase; rRNA me 99.3 5.1E-12 1.7E-16 111.5 9.9 114 80-207 97-230 (464)
244 2cmg_A Spermidine synthase; tr 99.3 2.6E-12 8.7E-17 105.7 7.6 103 83-208 71-173 (262)
245 3ldg_A Putative uncharacterize 99.3 6.5E-11 2.2E-15 102.4 14.6 122 76-211 186-348 (384)
246 2yx1_A Hypothetical protein MJ 99.3 2.7E-11 9.1E-16 103.3 11.5 99 83-207 194-292 (336)
247 3ldu_A Putative methylase; str 99.3 2.2E-11 7.5E-16 105.5 10.8 122 76-211 187-349 (385)
248 1uwv_A 23S rRNA (uracil-5-)-me 99.3 7.9E-11 2.7E-15 103.7 14.5 124 72-215 274-397 (433)
249 3gru_A Dimethyladenosine trans 99.3 5.4E-11 1.8E-15 99.2 12.6 89 71-176 37-125 (295)
250 3k0b_A Predicted N6-adenine-sp 99.2 4.4E-11 1.5E-15 103.8 11.8 122 76-211 193-355 (393)
251 2okc_A Type I restriction enzy 99.2 1.7E-11 5.9E-16 108.4 9.0 131 62-209 152-310 (445)
252 2jjq_A Uncharacterized RNA met 99.2 1.6E-10 5.3E-15 101.4 14.8 111 82-218 288-398 (425)
253 2ih2_A Modification methylase 99.2 2E-11 7E-16 107.0 9.0 120 63-209 21-167 (421)
254 1yub_A Ermam, rRNA methyltrans 99.2 1.4E-12 4.6E-17 106.4 1.2 113 73-206 18-145 (245)
255 1qam_A ERMC' methyltransferase 99.2 3.7E-11 1.3E-15 97.8 9.6 87 72-175 18-104 (244)
256 3tqs_A Ribosomal RNA small sub 99.2 3.4E-10 1.1E-14 92.6 14.8 91 71-175 16-106 (255)
257 3fut_A Dimethyladenosine trans 99.2 1.4E-10 4.7E-15 95.6 12.3 101 70-191 33-133 (271)
258 2xyq_A Putative 2'-O-methyl tr 99.2 1.1E-10 3.9E-15 96.9 9.7 97 81-207 60-172 (290)
259 2b9e_A NOL1/NOP2/SUN domain fa 99.2 6.9E-10 2.4E-14 93.2 14.2 116 80-207 98-235 (309)
260 2qfm_A Spermine synthase; sper 99.2 7.6E-10 2.6E-14 94.0 14.5 123 84-208 188-316 (364)
261 3bt7_A TRNA (uracil-5-)-methyl 99.1 5.7E-10 1.9E-14 96.2 13.4 113 84-218 213-338 (369)
262 2dul_A N(2),N(2)-dimethylguano 99.1 4.3E-10 1.5E-14 97.1 11.4 114 84-210 47-168 (378)
263 3axs_A Probable N(2),N(2)-dime 99.1 3.3E-10 1.1E-14 97.9 9.8 108 83-210 51-162 (392)
264 3ftd_A Dimethyladenosine trans 99.1 5.8E-10 2E-14 90.9 10.4 74 71-157 18-91 (249)
265 2ar0_A M.ecoki, type I restric 99.0 7.1E-10 2.4E-14 100.1 9.5 138 61-209 149-315 (541)
266 3v97_A Ribosomal RNA large sub 99.0 3.6E-09 1.2E-13 98.3 13.8 127 75-212 181-353 (703)
267 1m6y_A S-adenosyl-methyltransf 99.0 8.4E-10 2.9E-14 92.2 8.6 90 75-174 17-107 (301)
268 3khk_A Type I restriction-modi 99.0 1.4E-09 4.8E-14 98.1 10.3 133 61-209 225-398 (544)
269 3o4f_A Spermidine synthase; am 99.0 3.2E-09 1.1E-13 87.8 11.6 117 82-206 81-198 (294)
270 3uzu_A Ribosomal RNA small sub 99.0 5.7E-09 1.9E-13 86.4 12.3 76 71-159 29-107 (279)
271 3lkd_A Type I restriction-modi 99.0 7.5E-09 2.6E-13 93.2 13.6 143 59-210 195-362 (542)
272 3evf_A RNA-directed RNA polyme 99.0 1.3E-09 4.3E-14 88.6 7.4 117 75-208 65-186 (277)
273 2r6z_A UPF0341 protein in RSP 98.9 1.6E-09 5.5E-14 88.7 7.9 82 82-177 81-173 (258)
274 1qyr_A KSGA, high level kasuga 98.9 1.8E-09 6.1E-14 88.1 7.6 91 71-175 8-100 (252)
275 3s1s_A Restriction endonucleas 98.9 4.6E-08 1.6E-12 90.4 15.4 142 60-210 294-469 (878)
276 3cvo_A Methyltransferase-like 98.9 2.1E-08 7.3E-13 78.5 11.1 104 83-205 29-153 (202)
277 4gqb_A Protein arginine N-meth 98.9 5.4E-09 1.8E-13 95.1 8.3 102 85-203 358-464 (637)
278 3gcz_A Polyprotein; flavivirus 98.8 4.5E-09 1.5E-13 85.5 5.9 117 75-208 81-203 (282)
279 3ua3_A Protein arginine N-meth 98.8 7E-09 2.4E-13 94.4 7.8 108 85-203 410-531 (745)
280 3b5i_A S-adenosyl-L-methionine 98.8 4.3E-08 1.5E-12 84.1 10.7 136 70-207 33-226 (374)
281 1wg8_A Predicted S-adenosylmet 98.7 5.5E-08 1.9E-12 79.5 9.1 86 73-172 11-96 (285)
282 3ll7_A Putative methyltransfer 98.7 1.3E-08 4.6E-13 88.1 5.4 78 84-173 93-171 (410)
283 4fzv_A Putative methyltransfer 98.7 1.6E-07 5.6E-12 80.1 11.2 121 80-207 144-285 (359)
284 3c6k_A Spermine synthase; sper 98.7 2.8E-07 9.6E-12 78.6 12.4 121 83-205 204-330 (381)
285 2efj_A 3,7-dimethylxanthine me 98.6 5.8E-07 2E-11 77.2 12.1 110 85-207 53-226 (384)
286 3ufb_A Type I restriction-modi 98.5 4.3E-07 1.5E-11 81.7 10.9 137 60-209 196-365 (530)
287 3eld_A Methyltransferase; flav 98.5 3.3E-07 1.1E-11 75.0 8.4 110 82-208 79-193 (300)
288 2oyr_A UPF0341 protein YHIQ; a 98.5 1.2E-07 3.9E-12 77.5 5.2 92 80-177 82-176 (258)
289 2px2_A Genome polyprotein [con 98.5 6.1E-07 2.1E-11 71.9 9.1 108 81-209 70-186 (269)
290 3lkz_A Non-structural protein 98.4 1.8E-06 6.1E-11 70.4 10.7 126 74-217 84-217 (321)
291 4auk_A Ribosomal RNA large sub 98.4 1.7E-06 5.8E-11 73.5 10.7 73 82-176 209-281 (375)
292 1m6e_X S-adenosyl-L-methionnin 98.4 1.3E-06 4.5E-11 74.3 9.6 113 85-207 52-210 (359)
293 2wk1_A NOVP; transferase, O-me 98.3 6.4E-06 2.2E-10 67.9 12.2 109 83-208 105-246 (282)
294 3p8z_A Mtase, non-structural p 98.3 5.1E-06 1.7E-10 65.6 10.3 113 75-208 69-188 (267)
295 2qy6_A UPF0209 protein YFCK; s 98.3 1.1E-06 3.9E-11 71.6 6.6 121 83-206 59-213 (257)
296 2k4m_A TR8_protein, UPF0146 pr 98.3 1.8E-06 6.2E-11 63.3 6.4 87 83-206 34-121 (153)
297 3r24_A NSP16, 2'-O-methyl tran 98.0 1.4E-05 5E-10 65.1 8.1 100 81-208 106-219 (344)
298 3tka_A Ribosomal RNA small sub 98.0 1.4E-05 4.7E-10 66.9 8.0 88 73-173 46-136 (347)
299 2zig_A TTHA0409, putative modi 98.0 1.4E-05 4.8E-10 66.6 7.2 54 73-128 225-278 (297)
300 2uyo_A Hypothetical protein ML 97.6 0.0023 7.7E-08 53.5 14.3 114 85-208 103-220 (310)
301 2oo3_A Protein involved in cat 97.5 9.7E-05 3.3E-09 60.4 5.5 107 84-207 91-199 (283)
302 1rjd_A PPM1P, carboxy methyl t 97.5 0.0027 9.4E-08 53.5 14.0 120 83-206 96-233 (334)
303 2vz8_A Fatty acid synthase; tr 97.5 3.9E-05 1.3E-09 80.3 3.1 103 83-206 1239-1348(2512)
304 1g60_A Adenine-specific methyl 97.5 0.00024 8.2E-09 57.9 7.2 54 73-128 202-255 (260)
305 1i4w_A Mitochondrial replicati 97.5 0.0004 1.4E-08 59.0 8.4 60 84-155 58-118 (353)
306 3g7u_A Cytosine-specific methy 97.1 0.0038 1.3E-07 53.5 10.9 108 86-207 3-121 (376)
307 3tos_A CALS11; methyltransfera 97.0 0.041 1.4E-06 44.4 15.3 164 34-207 17-218 (257)
308 1g55_A DNA cytosine methyltran 96.8 0.0013 4.4E-08 55.8 5.4 76 85-176 2-79 (343)
309 3ubt_Y Modification methylase 96.7 0.011 3.7E-07 49.6 9.9 69 86-173 1-69 (331)
310 1boo_A Protein (N-4 cytosine-s 96.6 0.0044 1.5E-07 52.0 6.9 55 73-129 242-296 (323)
311 2c7p_A Modification methylase 96.6 0.0066 2.3E-07 51.0 8.0 71 85-175 11-81 (327)
312 1f8f_A Benzyl alcohol dehydrog 96.4 0.0075 2.6E-07 51.5 7.4 99 80-205 186-288 (371)
313 1eg2_A Modification methylase 96.3 0.0076 2.6E-07 50.5 6.8 56 72-129 231-289 (319)
314 3s2e_A Zinc-containing alcohol 96.1 0.015 5.2E-07 48.9 7.7 101 79-205 161-262 (340)
315 3two_A Mannitol dehydrogenase; 96.1 0.018 6.2E-07 48.6 8.0 93 79-205 171-264 (348)
316 2qrv_A DNA (cytosine-5)-methyl 96.0 0.015 5.2E-07 48.0 7.0 75 84-173 15-91 (295)
317 1pl8_A Human sorbitol dehydrog 96.0 0.021 7.3E-07 48.4 7.8 100 79-205 166-272 (356)
318 4ej6_A Putative zinc-binding d 96.0 0.037 1.3E-06 47.2 9.4 102 78-205 176-283 (370)
319 3fwz_A Inner membrane protein 95.9 0.055 1.9E-06 39.1 8.8 103 85-211 7-110 (140)
320 2zig_A TTHA0409, putative modi 95.8 0.018 6.2E-07 47.6 6.6 62 143-208 21-99 (297)
321 3qv2_A 5-cytosine DNA methyltr 95.8 0.013 4.4E-07 49.3 5.5 76 84-176 9-87 (327)
322 4h0n_A DNMT2; SAH binding, tra 95.7 0.013 4.5E-07 49.3 5.5 74 86-175 4-79 (333)
323 1uuf_A YAHK, zinc-type alcohol 95.7 0.044 1.5E-06 46.7 8.8 97 80-205 190-287 (369)
324 3fpc_A NADP-dependent alcohol 95.6 0.028 9.4E-07 47.6 7.1 102 78-205 160-265 (352)
325 1e3j_A NADP(H)-dependent ketos 95.4 0.067 2.3E-06 45.1 8.8 101 79-205 163-270 (352)
326 3m6i_A L-arabinitol 4-dehydrog 95.3 0.08 2.7E-06 44.8 9.1 104 78-205 173-282 (363)
327 2dph_A Formaldehyde dismutase; 95.2 0.037 1.3E-06 47.7 6.5 110 79-205 180-298 (398)
328 1pqw_A Polyketide synthase; ro 95.1 0.022 7.5E-07 43.8 4.5 96 81-205 35-136 (198)
329 1kol_A Formaldehyde dehydrogen 95.0 0.018 6.2E-07 49.6 4.1 105 80-205 181-299 (398)
330 3uko_A Alcohol dehydrogenase c 94.9 0.053 1.8E-06 46.3 6.8 99 80-205 189-294 (378)
331 3ip1_A Alcohol dehydrogenase, 94.9 0.12 4.1E-06 44.5 9.0 103 82-205 211-317 (404)
332 3jv7_A ADH-A; dehydrogenase, n 94.9 0.046 1.6E-06 46.0 6.2 98 81-205 168-269 (345)
333 3uog_A Alcohol dehydrogenase; 94.8 0.046 1.6E-06 46.4 6.2 98 81-205 186-286 (363)
334 1boo_A Protein (N-4 cytosine-s 94.8 0.2 6.8E-06 41.8 9.9 63 143-209 14-87 (323)
335 2jhf_A Alcohol dehydrogenase E 94.7 0.1 3.4E-06 44.4 8.0 98 81-205 188-292 (374)
336 1cdo_A Alcohol dehydrogenase; 94.7 0.082 2.8E-06 45.0 7.5 98 81-205 189-293 (374)
337 2h6e_A ADH-4, D-arabinose 1-de 94.7 0.055 1.9E-06 45.5 6.2 97 81-205 168-268 (344)
338 1p0f_A NADP-dependent alcohol 94.7 0.085 2.9E-06 44.9 7.4 98 81-205 188-292 (373)
339 2fzw_A Alcohol dehydrogenase c 94.7 0.096 3.3E-06 44.5 7.7 98 81-205 187-291 (373)
340 3vyw_A MNMC2; tRNA wobble urid 94.6 0.17 5.7E-06 41.9 8.7 113 83-204 95-224 (308)
341 1rjw_A ADH-HT, alcohol dehydro 94.6 0.12 3.9E-06 43.4 7.9 99 80-205 160-260 (339)
342 3gms_A Putative NADPH:quinone 94.5 0.04 1.4E-06 46.3 5.0 99 80-205 140-242 (340)
343 1piw_A Hypothetical zinc-type 94.5 0.063 2.2E-06 45.5 6.2 99 80-205 175-275 (360)
344 1vj0_A Alcohol dehydrogenase, 94.5 0.098 3.4E-06 44.7 7.3 98 82-205 193-297 (380)
345 4a2c_A Galactitol-1-phosphate 94.4 0.2 6.8E-06 41.9 9.1 102 79-205 155-259 (346)
346 4b7c_A Probable oxidoreductase 94.4 0.049 1.7E-06 45.6 5.3 99 80-205 145-247 (336)
347 1e3i_A Alcohol dehydrogenase, 94.4 0.1 3.5E-06 44.4 7.2 98 81-205 192-296 (376)
348 1jvb_A NAD(H)-dependent alcoho 94.3 0.13 4.4E-06 43.3 7.6 100 80-205 166-270 (347)
349 4dvj_A Putative zinc-dependent 94.2 0.15 5E-06 43.3 7.9 94 84-205 171-269 (363)
350 3jyn_A Quinone oxidoreductase; 94.2 0.088 3E-06 43.9 6.3 98 81-205 137-238 (325)
351 3me5_A Cytosine-specific methy 94.2 0.089 3E-06 46.5 6.6 81 86-177 89-181 (482)
352 2b5w_A Glucose dehydrogenase; 94.2 0.2 6.9E-06 42.2 8.6 98 80-205 162-272 (357)
353 1v3u_A Leukotriene B4 12- hydr 94.1 0.06 2E-06 45.0 5.2 95 81-205 142-243 (333)
354 2hcy_A Alcohol dehydrogenase 1 94.1 0.08 2.7E-06 44.5 6.0 96 81-205 166-268 (347)
355 4eye_A Probable oxidoreductase 94.1 0.079 2.7E-06 44.5 5.9 97 81-205 156-256 (342)
356 2py6_A Methyltransferase FKBM; 94.1 0.07 2.4E-06 46.2 5.6 47 83-129 225-274 (409)
357 3c85_A Putative glutathione-re 94.1 0.49 1.7E-05 35.6 9.8 103 85-211 39-144 (183)
358 3l9w_A Glutathione-regulated p 94.0 0.28 9.4E-06 42.5 9.2 102 85-210 4-106 (413)
359 3llv_A Exopolyphosphatase-rela 94.0 0.49 1.7E-05 33.8 9.3 101 85-210 6-107 (141)
360 3qwb_A Probable quinone oxidor 94.0 0.11 3.8E-06 43.4 6.6 98 81-205 145-246 (334)
361 2d8a_A PH0655, probable L-thre 93.8 0.14 4.7E-06 43.1 6.8 98 81-205 165-266 (348)
362 1lss_A TRK system potassium up 93.8 0.66 2.3E-05 32.7 9.7 102 85-210 4-106 (140)
363 2c0c_A Zinc binding alcohol de 93.7 0.18 6E-06 42.7 7.3 97 81-205 160-260 (362)
364 4dup_A Quinone oxidoreductase; 93.4 0.12 4.1E-06 43.6 5.8 97 81-205 164-264 (353)
365 1yqd_A Sinapyl alcohol dehydro 93.4 0.22 7.4E-06 42.3 7.4 97 80-205 182-281 (366)
366 2j3h_A NADP-dependent oxidored 93.4 0.1 3.5E-06 43.8 5.3 99 81-205 152-254 (345)
367 2cf5_A Atccad5, CAD, cinnamyl 93.3 0.16 5.5E-06 42.9 6.4 97 80-205 175-274 (357)
368 2eih_A Alcohol dehydrogenase; 93.3 0.24 8.3E-06 41.5 7.5 96 81-205 163-264 (343)
369 2g1u_A Hypothetical protein TM 93.3 0.24 8.1E-06 36.3 6.6 105 83-210 17-122 (155)
370 3goh_A Alcohol dehydrogenase, 93.2 0.09 3.1E-06 43.6 4.6 91 80-206 138-229 (315)
371 3fbg_A Putative arginate lyase 92.8 0.27 9.1E-06 41.3 7.1 94 84-205 150-247 (346)
372 4eez_A Alcohol dehydrogenase 1 92.8 0.53 1.8E-05 39.4 8.9 103 79-205 158-262 (348)
373 1zkd_A DUF185; NESG, RPR58, st 92.8 0.23 8E-06 42.5 6.7 62 67-128 63-132 (387)
374 3tqh_A Quinone oxidoreductase; 92.6 0.43 1.5E-05 39.5 8.0 96 78-205 146-244 (321)
375 2j8z_A Quinone oxidoreductase; 92.5 0.24 8.4E-06 41.7 6.4 96 81-205 159-260 (354)
376 2dq4_A L-threonine 3-dehydroge 92.3 0.092 3.1E-06 44.1 3.5 96 81-205 162-261 (343)
377 1iz0_A Quinone oxidoreductase; 92.2 0.14 4.8E-06 42.1 4.5 92 82-205 123-217 (302)
378 3pvc_A TRNA 5-methylaminomethy 92.2 0.29 9.8E-06 45.3 6.9 119 84-204 58-209 (689)
379 3l4b_C TRKA K+ channel protien 92.1 0.55 1.9E-05 36.4 7.7 98 87-209 2-102 (218)
380 1qor_A Quinone oxidoreductase; 91.9 0.24 8.2E-06 41.2 5.6 96 81-205 137-238 (327)
381 3nx4_A Putative oxidoreductase 91.9 0.22 7.7E-06 41.2 5.4 90 87-205 149-240 (324)
382 1wly_A CAAR, 2-haloacrylate re 91.8 0.44 1.5E-05 39.7 7.1 96 81-205 142-243 (333)
383 1id1_A Putative potassium chan 91.5 1.6 5.6E-05 31.5 9.3 104 85-211 3-110 (153)
384 3ps9_A TRNA 5-methylaminomethy 91.4 0.44 1.5E-05 43.9 7.3 119 84-205 66-218 (676)
385 4g65_A TRK system potassium up 91.3 0.6 2E-05 41.0 7.7 102 85-211 3-107 (461)
386 1yb5_A Quinone oxidoreductase; 91.3 0.22 7.5E-06 42.0 4.8 96 81-205 167-268 (351)
387 3krt_A Crotonyl COA reductase; 91.2 0.6 2E-05 40.8 7.7 46 81-126 225-272 (456)
388 1xa0_A Putative NADPH dependen 91.1 0.37 1.3E-05 40.0 6.0 97 82-205 146-245 (328)
389 3swr_A DNA (cytosine-5)-methyl 91.0 0.43 1.5E-05 45.9 6.9 45 84-128 539-584 (1002)
390 3iei_A Leucine carboxyl methyl 90.8 6.3 0.00022 32.9 14.1 121 84-207 90-231 (334)
391 4f3n_A Uncharacterized ACR, CO 90.8 0.62 2.1E-05 40.4 7.2 58 68-128 124-187 (432)
392 2vn8_A Reticulon-4-interacting 90.7 0.38 1.3E-05 40.8 5.8 98 82-206 181-280 (375)
393 2zb4_A Prostaglandin reductase 90.5 0.69 2.4E-05 38.8 7.2 97 80-205 154-259 (357)
394 1g60_A Adenine-specific methyl 90.3 0.35 1.2E-05 38.9 4.9 62 144-208 5-76 (260)
395 1tt7_A YHFP; alcohol dehydroge 90.2 0.48 1.6E-05 39.4 5.8 96 82-205 147-246 (330)
396 2cdc_A Glucose dehydrogenase g 90.1 0.75 2.6E-05 38.8 7.1 91 85-205 181-277 (366)
397 4eso_A Putative oxidoreductase 89.6 2.8 9.7E-05 33.2 9.9 108 84-205 7-137 (255)
398 3ggo_A Prephenate dehydrogenas 89.6 1.4 4.9E-05 36.4 8.2 90 85-203 33-125 (314)
399 3gaz_A Alcohol dehydrogenase s 89.3 0.48 1.6E-05 39.7 5.2 95 81-205 147-245 (343)
400 2aef_A Calcium-gated potassium 88.6 1.5 5.2E-05 34.3 7.4 99 84-210 8-109 (234)
401 3gqv_A Enoyl reductase; medium 88.2 1.5 5.1E-05 37.1 7.6 95 83-205 163-262 (371)
402 1eg2_A Modification methylase 88.2 1.3 4.6E-05 36.7 7.1 62 144-208 39-108 (319)
403 3pxx_A Carveol dehydrogenase; 88.2 2.5 8.6E-05 33.9 8.7 111 84-205 9-152 (287)
404 3oig_A Enoyl-[acyl-carrier-pro 88.1 3.8 0.00013 32.5 9.7 113 84-206 6-147 (266)
405 4a0s_A Octenoyl-COA reductase/ 87.8 1.1 3.8E-05 38.9 6.7 45 81-125 217-263 (447)
406 2eez_A Alanine dehydrogenase; 87.3 0.39 1.3E-05 40.8 3.4 100 84-205 165-265 (369)
407 3ijr_A Oxidoreductase, short c 87.2 4.3 0.00015 32.8 9.6 112 84-206 46-182 (291)
408 1lnq_A MTHK channels, potassiu 87.1 2.8 9.7E-05 34.7 8.6 98 85-210 115-215 (336)
409 2vhw_A Alanine dehydrogenase; 86.3 0.25 8.4E-06 42.2 1.6 44 84-127 167-211 (377)
410 2hmt_A YUAA protein; RCK, KTN, 86.2 2.5 8.6E-05 29.7 6.9 101 85-211 6-109 (144)
411 4fgs_A Probable dehydrogenase 86.0 2.5 8.6E-05 34.2 7.4 108 84-205 28-158 (273)
412 3o26_A Salutaridine reductase; 85.6 12 0.00042 30.0 11.7 83 84-176 11-102 (311)
413 3ce6_A Adenosylhomocysteinase; 85.6 1.2 4.2E-05 39.4 5.7 89 82-205 271-360 (494)
414 4ft4_B DNA (cytosine-5)-methyl 85.1 0.66 2.3E-05 43.6 4.0 45 84-128 211-261 (784)
415 3grk_A Enoyl-(acyl-carrier-pro 85.0 6 0.00021 32.0 9.4 112 84-206 30-169 (293)
416 3av4_A DNA (cytosine-5)-methyl 84.9 1.9 6.4E-05 42.8 7.1 45 84-128 850-895 (1330)
417 3o38_A Short chain dehydrogena 84.5 4.2 0.00014 32.2 8.1 82 84-175 21-111 (266)
418 2f1k_A Prephenate dehydrogenas 84.5 6.2 0.00021 31.5 9.2 87 87-206 2-90 (279)
419 2g5c_A Prephenate dehydrogenas 84.5 6.8 0.00023 31.3 9.4 88 87-204 3-94 (281)
420 3r3s_A Oxidoreductase; structu 84.4 5.2 0.00018 32.4 8.7 111 84-205 48-184 (294)
421 1pjc_A Protein (L-alanine dehy 84.3 0.41 1.4E-05 40.5 2.0 44 84-127 166-210 (361)
422 3k31_A Enoyl-(acyl-carrier-pro 84.0 3.6 0.00012 33.4 7.6 111 84-205 29-167 (296)
423 3ek2_A Enoyl-(acyl-carrier-pro 83.9 7.9 0.00027 30.5 9.5 112 83-205 12-152 (271)
424 3is3_A 17BETA-hydroxysteroid d 83.6 5.9 0.0002 31.5 8.7 112 84-206 17-152 (270)
425 3pi7_A NADH oxidoreductase; gr 83.6 1.8 6.1E-05 36.2 5.7 96 83-205 162-262 (349)
426 3dmg_A Probable ribosomal RNA 82.8 21 0.00071 30.2 12.2 100 83-210 44-143 (381)
427 3oj0_A Glutr, glutamyl-tRNA re 82.6 2 7E-05 30.7 5.0 42 84-127 20-64 (144)
428 1wma_A Carbonyl reductase [NAD 82.6 5 0.00017 31.6 7.8 112 84-206 3-138 (276)
429 3l77_A Short-chain alcohol deh 82.2 6.2 0.00021 30.5 8.1 82 85-176 2-91 (235)
430 3gvc_A Oxidoreductase, probabl 82.2 9.1 0.00031 30.7 9.3 79 84-176 28-114 (277)
431 2ew2_A 2-dehydropantoate 2-red 81.2 17 0.00057 29.3 10.8 102 86-204 4-106 (316)
432 1l7d_A Nicotinamide nucleotide 81.2 0.59 2E-05 39.9 1.8 42 84-125 171-213 (384)
433 1g0o_A Trihydroxynaphthalene r 81.1 11 0.00037 30.1 9.4 111 84-205 28-162 (283)
434 3edm_A Short chain dehydrogena 81.1 5.3 0.00018 31.6 7.4 111 84-205 7-142 (259)
435 4a27_A Synaptic vesicle membra 81.1 1.5 5.3E-05 36.6 4.4 94 81-205 139-237 (349)
436 3p2y_A Alanine dehydrogenase/p 80.9 0.44 1.5E-05 40.6 0.9 42 84-125 183-225 (381)
437 4e12_A Diketoreductase; oxidor 80.9 8.2 0.00028 31.1 8.6 104 86-203 5-118 (283)
438 3ius_A Uncharacterized conserv 80.6 19 0.00066 28.4 11.1 82 86-194 6-90 (286)
439 3sx2_A Putative 3-ketoacyl-(ac 80.6 4.9 0.00017 32.1 7.1 84 84-178 12-115 (278)
440 3rkr_A Short chain oxidoreduct 80.5 4.7 0.00016 31.9 6.9 81 84-175 28-116 (262)
441 4e6p_A Probable sorbitol dehyd 80.4 7.5 0.00026 30.7 8.1 78 84-175 7-92 (259)
442 2hwk_A Helicase NSP2; rossman 80.4 1.5 5E-05 35.7 3.6 45 164-208 205-256 (320)
443 4hp8_A 2-deoxy-D-gluconate 3-d 80.1 11 0.00037 29.9 8.8 80 83-175 7-89 (247)
444 3ado_A Lambda-crystallin; L-gu 80.0 1.7 5.7E-05 36.2 4.1 109 84-207 5-124 (319)
445 3ic5_A Putative saccharopine d 79.8 5.5 0.00019 26.7 6.3 69 85-174 5-78 (118)
446 3d1l_A Putative NADP oxidoredu 79.5 14 0.00047 29.2 9.4 90 85-206 10-101 (266)
447 2zwa_A Leucine carboxyl methyl 79.1 12 0.00042 34.4 10.1 131 69-204 92-252 (695)
448 3ioy_A Short-chain dehydrogena 78.9 8.7 0.0003 31.5 8.3 83 84-175 7-97 (319)
449 4g81_D Putative hexonate dehyd 78.4 3.3 0.00011 33.1 5.3 83 83-176 7-97 (255)
450 4dio_A NAD(P) transhydrogenase 78.1 0.71 2.4E-05 39.7 1.3 42 84-125 189-231 (405)
451 3v2g_A 3-oxoacyl-[acyl-carrier 77.9 14 0.00046 29.5 8.9 111 84-205 30-164 (271)
452 3uve_A Carveol dehydrogenase ( 77.6 10 0.00034 30.4 8.1 81 84-175 10-114 (286)
453 4dcm_A Ribosomal RNA large sub 77.3 22 0.00075 30.0 10.4 102 84-209 38-139 (375)
454 3qiv_A Short-chain dehydrogena 77.3 5.5 0.00019 31.2 6.4 81 84-175 8-96 (253)
455 3t7c_A Carveol dehydrogenase; 77.1 8.6 0.00029 31.1 7.7 81 84-175 27-127 (299)
456 2gdz_A NAD+-dependent 15-hydro 77.0 9.1 0.00031 30.3 7.6 84 84-176 6-97 (267)
457 1xq1_A Putative tropinone redu 76.7 12 0.00039 29.5 8.2 81 84-175 13-102 (266)
458 3c24_A Putative oxidoreductase 76.7 12 0.0004 30.1 8.3 88 86-208 12-102 (286)
459 1qsg_A Enoyl-[acyl-carrier-pro 76.6 25 0.00087 27.5 10.9 82 84-176 8-98 (265)
460 4gx0_A TRKA domain protein; me 76.3 9.1 0.00031 34.2 8.2 98 85-209 127-227 (565)
461 3gvp_A Adenosylhomocysteinase 75.9 5.2 0.00018 34.6 6.1 41 84-124 219-260 (435)
462 2h7i_A Enoyl-[acyl-carrier-pro 75.9 11 0.00039 29.8 8.0 109 84-205 6-147 (269)
463 3lyl_A 3-oxoacyl-(acyl-carrier 75.6 16 0.00053 28.4 8.6 81 84-175 4-92 (247)
464 4da9_A Short-chain dehydrogena 75.2 9.3 0.00032 30.6 7.3 81 84-175 28-117 (280)
465 3b1f_A Putative prephenate deh 75.1 13 0.00046 29.7 8.3 88 86-203 7-98 (290)
466 3ksu_A 3-oxoacyl-acyl carrier 74.7 13 0.00043 29.5 7.9 112 84-206 10-147 (262)
467 1xg5_A ARPG836; short chain de 74.5 28 0.00097 27.5 10.1 83 84-175 31-121 (279)
468 3ctm_A Carbonyl reductase; alc 74.5 7.3 0.00025 31.0 6.5 81 84-175 33-121 (279)
469 2rir_A Dipicolinate synthase, 74.3 14 0.00047 30.0 8.2 88 84-205 156-245 (300)
470 3u5t_A 3-oxoacyl-[acyl-carrier 74.2 8 0.00027 30.8 6.6 111 84-206 26-161 (267)
471 1ja9_A 4HNR, 1,3,6,8-tetrahydr 73.8 8.5 0.00029 30.4 6.7 81 84-175 20-109 (274)
472 3pgx_A Carveol dehydrogenase; 73.7 15 0.0005 29.3 8.1 82 84-176 14-116 (280)
473 2cvz_A Dehydrogenase, 3-hydrox 73.5 17 0.00059 28.9 8.6 85 87-204 3-88 (289)
474 3tsc_A Putative oxidoreductase 73.5 13 0.00043 29.7 7.7 82 84-176 10-112 (277)
475 4fn4_A Short chain dehydrogena 73.0 10 0.00036 30.1 6.9 81 84-175 6-94 (254)
476 3d4o_A Dipicolinate synthase s 72.6 8.6 0.00029 31.2 6.5 41 84-124 154-195 (293)
477 4ibo_A Gluconate dehydrogenase 72.4 9.9 0.00034 30.3 6.7 82 84-176 25-114 (271)
478 1zcj_A Peroxisomal bifunctiona 71.8 24 0.00082 30.7 9.5 104 86-206 38-150 (463)
479 1yb1_A 17-beta-hydroxysteroid 71.5 15 0.00052 29.1 7.7 82 84-176 30-119 (272)
480 3cxt_A Dehydrogenase with diff 71.3 14 0.00048 29.7 7.5 81 84-175 33-121 (291)
481 1spx_A Short-chain reductase f 71.3 19 0.00066 28.5 8.3 85 84-176 5-97 (278)
482 2pd4_A Enoyl-[acyl-carrier-pro 71.3 21 0.00072 28.2 8.5 111 84-205 5-143 (275)
483 3f9i_A 3-oxoacyl-[acyl-carrier 71.2 12 0.0004 29.2 6.9 80 83-176 12-95 (249)
484 3g0o_A 3-hydroxyisobutyrate de 70.8 19 0.00065 29.1 8.3 90 85-205 7-101 (303)
485 2p91_A Enoyl-[acyl-carrier-pro 70.5 38 0.0013 26.9 9.9 82 84-176 20-110 (285)
486 1ae1_A Tropinone reductase-I; 70.3 7.4 0.00025 31.0 5.5 81 84-175 20-109 (273)
487 1h2b_A Alcohol dehydrogenase; 70.2 4.7 0.00016 33.7 4.5 46 80-125 182-229 (359)
488 3tri_A Pyrroline-5-carboxylate 70.1 11 0.00037 30.4 6.5 89 86-206 4-97 (280)
489 2ae2_A Protein (tropinone redu 70.0 6.7 0.00023 30.9 5.2 81 84-175 8-97 (260)
490 4dkj_A Cytosine-specific methy 69.7 3.5 0.00012 35.4 3.5 43 86-128 11-59 (403)
491 1zsy_A Mitochondrial 2-enoyl t 69.7 13 0.00044 31.0 7.1 37 81-117 164-203 (357)
492 3qha_A Putative oxidoreductase 69.4 22 0.00075 28.7 8.3 88 86-205 16-104 (296)
493 3iht_A S-adenosyl-L-methionine 69.4 12 0.0004 27.6 5.7 105 84-205 40-146 (174)
494 1bg6_A N-(1-D-carboxylethyl)-L 69.2 15 0.00052 30.3 7.5 103 86-208 5-110 (359)
495 3n58_A Adenosylhomocysteinase; 69.0 7.8 0.00027 33.7 5.6 41 83-123 245-286 (464)
496 3rih_A Short chain dehydrogena 68.7 14 0.00046 29.9 6.9 82 84-175 40-129 (293)
497 1jw9_B Molybdopterin biosynthe 68.4 11 0.00038 29.7 6.1 33 85-117 31-65 (249)
498 2dpo_A L-gulonate 3-dehydrogen 68.2 28 0.00095 28.6 8.7 103 86-203 7-120 (319)
499 2ehd_A Oxidoreductase, oxidore 67.8 31 0.0011 26.3 8.6 76 85-175 5-88 (234)
500 3gt0_A Pyrroline-5-carboxylate 67.6 5.2 0.00018 31.5 4.0 87 86-203 3-94 (247)
No 1
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.90 E-value=1.6e-22 Score=169.68 Aligned_cols=178 Identities=40% Similarity=0.671 Sum_probs=139.4
Q ss_pred ccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCC
Q 024797 62 PIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS 141 (262)
Q Consensus 62 ~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 141 (262)
.....+.+..|+...+......++.+|||+|||+|.++..++..+...|+|+|+|+.+++.|+++.... +..
T Consensus 42 ~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~ 113 (298)
T 1ri5_A 42 KTINIRNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNM--------KRR 113 (298)
T ss_dssp CSHHHHHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTS--------CCS
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc--------CCC
Confidence 334466788888888776667788999999999999999887766668999999999999999987632 222
Q ss_pred CCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHHHHhhhcC
Q 024797 142 FPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEG 221 (262)
Q Consensus 142 ~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~~~~~~~~ 221 (262)
.++.++++|+.+.++. ++++||+|++..+++|.+...++...+++++.++|+|||.+++.+++...+...+..
T Consensus 114 ~~v~~~~~d~~~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~--- 186 (298)
T 1ri5_A 114 FKVFFRAQDSYGRHMD----LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQ--- 186 (298)
T ss_dssp SEEEEEESCTTTSCCC----CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHH---
T ss_pred ccEEEEECCccccccC----CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHcc---
Confidence 4589999999887651 367899999999998855577899999999999999999999999999877766553
Q ss_pred CccccceEEEEcCchhhhccCCCCCCcceeEEEEecCC
Q 024797 222 LAIGNSVYWIRLDEEFADKKFKSSRPFGIQYKFHLEVP 259 (262)
Q Consensus 222 ~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~y~f~l~~~ 259 (262)
..+++..|+..|.... .++ ..+|..|.|.+...
T Consensus 187 ~~~~~~~~~~~~~~~~---~~~--~~~g~~~~~~l~~~ 219 (298)
T 1ri5_A 187 GRMSNDFYKIELEKME---DVP--MESVREYRFTLLDS 219 (298)
T ss_dssp TCCBCSSEEEECCCCS---SCC--TTTCCEEEEEETTS
T ss_pred CccCCeeEEEEeCccc---ccc--ccccceEEEEEchh
Confidence 2466777888776532 111 22678888877543
No 2
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.89 E-value=6.9e-22 Score=167.46 Aligned_cols=188 Identities=39% Similarity=0.718 Sum_probs=139.0
Q ss_pred CccccchhHHHHHHHHHHHHh-----c--cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccc
Q 024797 61 SPIIHLKKLNNWIKSVLVQLY-----A--RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADH 133 (262)
Q Consensus 61 ~~~~~~~~~~~~~~~~l~~~~-----~--~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~ 133 (262)
++++.++.++.|++..+.... . .++.+|||+|||+|.++..+++.....++|+|+|+.|++.|+++....+..
T Consensus 4 s~i~~lr~~~~~~k~~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~ 83 (313)
T 3bgv_A 4 SRIFYLRNFNNWMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNR 83 (313)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSS
T ss_pred CcchhhhhccHHHHHHHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhc
Confidence 344556677777665543321 1 267899999999999999888766668999999999999999887521100
Q ss_pred cccccCCCCCeEEEeCcccccccccccC-CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHH
Q 024797 134 HQRRKKFSFPARLICGDCYEVHLDKVLA-DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 134 ~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
. ......++.++++|+..++...... ++++||+|++.+++||++.+.++...++.++.++|+|||.+++++++.+.+
T Consensus 84 ~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l 161 (313)
T 3bgv_A 84 R--DSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFEL 161 (313)
T ss_dssp S--CC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHH
T ss_pred c--cccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHH
Confidence 0 0001235899999998875211111 245899999999999876788889999999999999999999999999888
Q ss_pred HHHHhhhcCCccccceEEEEcCchhhhccCCCCCCcceeEEEEe
Q 024797 213 IKKLREVEGLAIGNSVYWIRLDEEFADKKFKSSRPFGIQYKFHL 256 (262)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~y~f~l 256 (262)
...+.......+++..|.+.|.... .-..++.+|.|.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~f~~~~------~~~~~~~~~~f~l 199 (313)
T 3bgv_A 162 IRRLEASETESFGNEIYTVKFQKKG------DYPLFGCKYDFNL 199 (313)
T ss_dssp HHHHTTSSSSEEECSSEEEEESCSS------CCCSSCCEEEEEE
T ss_pred HHHHHhhccCccCCeeEEEEeCCCC------CCCCccceEEEEE
Confidence 8887776666778888888777542 1245889999988
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.87 E-value=1.9e-21 Score=160.37 Aligned_cols=141 Identities=18% Similarity=0.357 Sum_probs=107.7
Q ss_pred HHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc---CCCeEEEEeCC
Q 024797 40 ARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA---KIGYYVGIDIA 116 (262)
Q Consensus 40 ~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s 116 (262)
.+.+++.|++...++... ...+.+.+..++ .....++.+|||+|||+|..+..+++. ...+|+|+|+|
T Consensus 35 ~~~va~~fdd~i~rsvP~--------Y~~~~~~i~~l~-~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s 105 (261)
T 4gek_A 35 DERVAEVFPDMIQRSVPG--------YSNIISMIGMLA-ERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNS 105 (261)
T ss_dssp CHHHHHHHHHHHHHHSTT--------HHHHHHHHHHHH-HHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESC
T ss_pred CcchhhhhhhhHhhcCCC--------HHHHHHHHHHHH-HHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECC
Confidence 356778887654443221 122333333332 334678999999999999999888763 23479999999
Q ss_pred hhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhcc
Q 024797 117 EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALL 196 (262)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L 196 (262)
+.|++.|++++... +...+++++++|+.++++ +.||+|+++++++|+ +.+++..++++++++|
T Consensus 106 ~~ml~~A~~~~~~~--------~~~~~v~~~~~D~~~~~~-------~~~d~v~~~~~l~~~--~~~~~~~~l~~i~~~L 168 (261)
T 4gek_A 106 PAMIERCRRHIDAY--------KAPTPVDVIEGDIRDIAI-------ENASMVVLNFTLQFL--EPSERQALLDKIYQGL 168 (261)
T ss_dssp HHHHHHHHHHHHTS--------CCSSCEEEEESCTTTCCC-------CSEEEEEEESCGGGS--CHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHhh--------ccCceEEEeecccccccc-------cccccceeeeeeeec--CchhHhHHHHHHHHHc
Confidence 99999999988732 334579999999988764 569999999999998 7778889999999999
Q ss_pred CCCcEEEEEe
Q 024797 197 RPGGTFIGTM 206 (262)
Q Consensus 197 ~~gG~li~~~ 206 (262)
+|||.|++..
T Consensus 169 kpGG~lii~e 178 (261)
T 4gek_A 169 NPGGALVLSE 178 (261)
T ss_dssp EEEEEEEEEE
T ss_pred CCCcEEEEEe
Confidence 9999999874
No 4
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.84 E-value=1.4e-20 Score=149.69 Aligned_cols=127 Identities=17% Similarity=0.165 Sum_probs=95.3
Q ss_pred HHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccc---cCCCCCeEEE
Q 024797 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRR---KKFSFPARLI 147 (262)
Q Consensus 71 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~---~~~~~~v~~~ 147 (262)
..+...+..+...++.+|||+|||+|..+..+++.+. .|+|+|+|+.|++.|+++........... .....+++++
T Consensus 9 ~~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~ 87 (203)
T 1pjz_A 9 KDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW 87 (203)
T ss_dssp HHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEE
T ss_pred HHHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEE
Confidence 3444455555556788999999999999999887644 89999999999999998754200000000 0012468999
Q ss_pred eCcccccccccccCCC-CCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 148 CGDCYEVHLDKVLADD-APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 148 ~~d~~~~~~~~~~~~~-~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
++|+.+++. ++ ++||+|++..+++|+ +.++...++++++++|||||++++.
T Consensus 88 ~~d~~~l~~-----~~~~~fD~v~~~~~l~~l--~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 88 CGDFFALTA-----RDIGHCAAFYDRAAMIAL--PADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp EECCSSSTH-----HHHHSEEEEEEESCGGGS--CHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred ECccccCCc-----ccCCCEEEEEECcchhhC--CHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 999998875 33 789999999999988 6677888999999999999984433
No 5
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.84 E-value=2.1e-20 Score=157.35 Aligned_cols=144 Identities=26% Similarity=0.367 Sum_probs=102.8
Q ss_pred chhHHHHHHHHHHHHhcc-------CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCcccccccc
Q 024797 66 LKKLNNWIKSVLVQLYAR-------RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRK 138 (262)
Q Consensus 66 ~~~~~~~~~~~l~~~~~~-------~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~ 138 (262)
++.++.|++..+...... ++.+|||+|||+|..+..++..+...|+|+|+|+.|++.|+++..+.+....
T Consensus 23 ~~~~nn~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~--- 99 (302)
T 2vdw_A 23 LGILSNYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIK--- 99 (302)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhcccccc---
Confidence 345667777666543322 4689999999999888877666666899999999999999998763211000
Q ss_pred CCCCCeEEEeCcccccc----cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHH
Q 024797 139 KFSFPARLICGDCYEVH----LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIK 214 (262)
Q Consensus 139 ~~~~~v~~~~~d~~~~~----~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~ 214 (262)
.-..++.+.+.|+.... +... .++++||+|+|.+++||++++. +...++++++++|||||++++++++.+.+..
T Consensus 100 ~~~~~~~f~~~d~~~d~~~~~l~~~-~~~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~ 177 (302)
T 2vdw_A 100 TKYYKFDYIQETIRSDTFVSSVREV-FYFGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLITTMDGDKLSK 177 (302)
T ss_dssp -CCCEEEEEECCTTSSSHHHHHHTT-CCSSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEEEEECHHHHTT
T ss_pred ccccccchhhhhcccchhhhhhhcc-ccCCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEEEeCCHHHHHH
Confidence 00012567788773211 1000 1467999999999999876554 4579999999999999999999999877653
No 6
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.83 E-value=1.4e-20 Score=154.78 Aligned_cols=128 Identities=22% Similarity=0.276 Sum_probs=89.4
Q ss_pred HHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCCh
Q 024797 38 VFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAE 117 (262)
Q Consensus 38 ~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~ 117 (262)
++|+.+++.|++.. .. ....+.+|+... ...+.+|||||||+|..+..++.. ..+|+|+|+|+
T Consensus 9 d~F~~~a~~Y~~~R-p~----------yp~~l~~~l~~~-----~~~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~ 71 (257)
T 4hg2_A 9 DHFTPVADAYRAFR-PR----------YPRALFRWLGEV-----APARGDALDCGCGSGQASLGLAEF-FERVHAVDPGE 71 (257)
T ss_dssp -----------CCC-CC----------CCHHHHHHHHHH-----SSCSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCH
T ss_pred HHHHHHHHHHHHHC-CC----------cHHHHHHHHHHh-----cCCCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcH
Confidence 47888899997421 10 123333333322 245679999999999999888754 45899999999
Q ss_pred hHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccC
Q 024797 118 GSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLR 197 (262)
Q Consensus 118 ~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~ 197 (262)
.|++.|++. .++.++++|+.++++ ++++||+|++..++||+ + ..+++.+++|+||
T Consensus 72 ~ml~~a~~~---------------~~v~~~~~~~e~~~~-----~~~sfD~v~~~~~~h~~--~---~~~~~~e~~rvLk 126 (257)
T 4hg2_A 72 AQIRQALRH---------------PRVTYAVAPAEDTGL-----PPASVDVAIAAQAMHWF--D---LDRFWAELRRVAR 126 (257)
T ss_dssp HHHHTCCCC---------------TTEEEEECCTTCCCC-----CSSCEEEEEECSCCTTC--C---HHHHHHHHHHHEE
T ss_pred Hhhhhhhhc---------------CCceeehhhhhhhcc-----cCCcccEEEEeeehhHh--h---HHHHHHHHHHHcC
Confidence 999887542 249999999999887 78999999999999886 3 4579999999999
Q ss_pred CCcEEEEEeC
Q 024797 198 PGGTFIGTMP 207 (262)
Q Consensus 198 ~gG~li~~~~ 207 (262)
|||.|++...
T Consensus 127 pgG~l~~~~~ 136 (257)
T 4hg2_A 127 PGAVFAAVTY 136 (257)
T ss_dssp EEEEEEEEEE
T ss_pred CCCEEEEEEC
Confidence 9999987653
No 7
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.81 E-value=3.4e-20 Score=147.11 Aligned_cols=141 Identities=11% Similarity=0.038 Sum_probs=106.9
Q ss_pred chhHHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEe
Q 024797 35 STKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGID 114 (262)
Q Consensus 35 ~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD 114 (262)
....+|+.++..|++....... .......++..++ ...+.+|||+|||+|.++..++... .+++|+|
T Consensus 4 ~~~~~y~~~a~~y~~~~~~~~~--------~~~~~~~~l~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD 70 (203)
T 3h2b_A 4 DVSKAYSSPTFDAEALLGTVIS--------AEDPDRVLIEPWA----TGVDGVILDVGSGTGRWTGHLASLG-HQIEGLE 70 (203)
T ss_dssp HHHHHHHCTTTCHHHHTCSSCC--------TTCTTHHHHHHHH----HHCCSCEEEETCTTCHHHHHHHHTT-CCEEEEC
T ss_pred HHHHHHhhHHHHHHHHhhhhcc--------ccHHHHHHHHHHh----ccCCCeEEEecCCCCHHHHHHHhcC-CeEEEEe
Confidence 3556788887777644322110 0112222333332 2347899999999999999887663 3899999
Q ss_pred CChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHh
Q 024797 115 IAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSA 194 (262)
Q Consensus 115 ~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~ 194 (262)
+|+.|++.++++.. ++.++++|+.++++ ++++||+|++..+++|+ +.+++..+++++.+
T Consensus 71 ~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~ 129 (203)
T 3h2b_A 71 PATRLVELARQTHP--------------SVTFHHGTITDLSD-----SPKRWAGLLAWYSLIHM--GPGELPDALVALRM 129 (203)
T ss_dssp CCHHHHHHHHHHCT--------------TSEEECCCGGGGGG-----SCCCEEEEEEESSSTTC--CTTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCC--------------CCeEEeCccccccc-----CCCCeEEEEehhhHhcC--CHHHHHHHHHHHHH
Confidence 99999999998754 48999999998876 67899999999999998 55578999999999
Q ss_pred ccCCCcEEEEEeCCh
Q 024797 195 LLRPGGTFIGTMPDA 209 (262)
Q Consensus 195 ~L~~gG~li~~~~~~ 209 (262)
+|+|||.+++.+++.
T Consensus 130 ~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 130 AVEDGGGLLMSFFSG 144 (203)
T ss_dssp TEEEEEEEEEEEECC
T ss_pred HcCCCcEEEEEEccC
Confidence 999999999987543
No 8
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.81 E-value=2.8e-19 Score=149.30 Aligned_cols=152 Identities=20% Similarity=0.210 Sum_probs=109.5
Q ss_pred hhHHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeC
Q 024797 36 TKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDI 115 (262)
Q Consensus 36 ~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~ 115 (262)
....|+.++..|+............ .......+..++..+. .++.+|||+|||+|.++..++.. ...|+|+|+
T Consensus 26 ~~~~fd~~a~~y~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~ 98 (285)
T 4htf_A 26 QDRNFDDIAEKFSRNIYGTTKGQLR-----QAILWQDLDRVLAEMG-PQKLRVLDAGGGEGQTAIKMAER-GHQVILCDL 98 (285)
T ss_dssp ------CHHHHHHSCTTSCHHHHHH-----HHHHHHHHHHHHHHTC-SSCCEEEEETCTTCHHHHHHHHT-TCEEEEEES
T ss_pred cccchhhHHHHHHHHhccCCcchHH-----HHHHHHHHHHHHHhcC-CCCCEEEEeCCcchHHHHHHHHC-CCEEEEEEC
Confidence 4468888999997544333221110 1112222334444443 34679999999999999988766 448999999
Q ss_pred ChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc-cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHh
Q 024797 116 AEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSA 194 (262)
Q Consensus 116 s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~ 194 (262)
|+.+++.|++++... +...++.++++|+.+++ + ++++||+|++..+++|+ +++..+++++.+
T Consensus 99 s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~ 161 (285)
T 4htf_A 99 SAQMIDRAKQAAEAK--------GVSDNMQFIHCAAQDVASH-----LETPVDLILFHAVLEWV----ADPRSVLQTLWS 161 (285)
T ss_dssp CHHHHHHHHHHHHC---------CCGGGEEEEESCGGGTGGG-----CSSCEEEEEEESCGGGC----SCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc--------CCCcceEEEEcCHHHhhhh-----cCCCceEEEECchhhcc----cCHHHHHHHHHH
Confidence 999999999988632 22356999999998876 3 57899999999999998 566889999999
Q ss_pred ccCCCcEEEEEeCChHH
Q 024797 195 LLRPGGTFIGTMPDANV 211 (262)
Q Consensus 195 ~L~~gG~li~~~~~~~~ 211 (262)
+|+|||.+++.+++...
T Consensus 162 ~LkpgG~l~~~~~~~~~ 178 (285)
T 4htf_A 162 VLRPGGVLSLMFYNAHG 178 (285)
T ss_dssp TEEEEEEEEEEEEBHHH
T ss_pred HcCCCeEEEEEEeCCch
Confidence 99999999999887654
No 9
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.81 E-value=6e-19 Score=144.60 Aligned_cols=122 Identities=14% Similarity=0.113 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEE
Q 024797 68 KLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI 147 (262)
Q Consensus 68 ~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~ 147 (262)
....|...++..+...++.+|||+|||+|.++..++......|+|+|+|+.+++.|+++... ..++.++
T Consensus 77 ~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----------~~~~~~~ 145 (254)
T 1xtp_A 77 VDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG-----------MPVGKFI 145 (254)
T ss_dssp HHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT-----------SSEEEEE
T ss_pred HHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc-----------CCceEEE
Confidence 34456666766665567889999999999999888765566799999999999999998752 1458999
Q ss_pred eCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 148 CGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 148 ~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++|+..+++ ++++||+|++..+++|+ +.+++..+++++.++|+|||.+++..+
T Consensus 146 ~~d~~~~~~-----~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 146 LASMETATL-----PPNTYDLIVIQWTAIYL--TDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp ESCGGGCCC-----CSSCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EccHHHCCC-----CCCCeEEEEEcchhhhC--CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 999988775 57899999999999998 667889999999999999999999874
No 10
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.81 E-value=2.2e-19 Score=145.50 Aligned_cols=140 Identities=14% Similarity=0.250 Sum_probs=106.7
Q ss_pred HHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHh-ccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeC
Q 024797 38 VFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLY-ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDI 115 (262)
Q Consensus 38 ~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~ 115 (262)
++|+.++..|+...... ......+...++..+. ..++.+|||+|||+|.++..+++.. ..+++|+|+
T Consensus 8 ~~f~~~a~~y~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~ 76 (234)
T 3dtn_A 8 RKFDAVSGKYDEQRRKF-----------IPCFDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDM 76 (234)
T ss_dssp CCCCHHHHHHHHHHHHH-----------CTTHHHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHHHHhHHHh-----------CcCHHHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEEC
Confidence 46777888887533221 1112222333333332 3567899999999999999887753 558999999
Q ss_pred ChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhc
Q 024797 116 AEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSAL 195 (262)
Q Consensus 116 s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~ 195 (262)
|+.+++.|+++.... .++.++++|+.+++. + ++||+|++..+++|+ +......+++++.++
T Consensus 77 s~~~~~~a~~~~~~~-----------~~~~~~~~d~~~~~~-----~-~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~ 137 (234)
T 3dtn_A 77 SEKMLEIAKNRFRGN-----------LKVKYIEADYSKYDF-----E-EKYDMVVSALSIHHL--EDEDKKELYKRSYSI 137 (234)
T ss_dssp CHHHHHHHHHHTCSC-----------TTEEEEESCTTTCCC-----C-SCEEEEEEESCGGGS--CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhccC-----------CCEEEEeCchhccCC-----C-CCceEEEEeCccccC--CHHHHHHHHHHHHHh
Confidence 999999999987631 269999999998875 3 899999999999998 666667899999999
Q ss_pred cCCCcEEEEEeC
Q 024797 196 LRPGGTFIGTMP 207 (262)
Q Consensus 196 L~~gG~li~~~~ 207 (262)
|+|||.+++..+
T Consensus 138 LkpgG~l~~~~~ 149 (234)
T 3dtn_A 138 LKESGIFINADL 149 (234)
T ss_dssp EEEEEEEEEEEE
T ss_pred cCCCcEEEEEEe
Confidence 999999998764
No 11
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.80 E-value=3.8e-19 Score=142.77 Aligned_cols=142 Identities=18% Similarity=0.149 Sum_probs=95.8
Q ss_pred hHHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCC
Q 024797 37 KVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIA 116 (262)
Q Consensus 37 ~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s 116 (262)
.+.|+.+++.|+......... .+........++..+...++.+|||+|||+|.++..++.. ..+++|+|+|
T Consensus 6 ~~~f~~~a~~y~~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s 76 (220)
T 3hnr_A 6 NGLFDEWAHTYDSFVQGEDIQ--------YKEVFAHYEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPS 76 (220)
T ss_dssp ------------------CCT--------TTTTTTTHHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSC
T ss_pred HHHHHHHHHHHHHHhhcchHh--------HHHHHHHHHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCC
Confidence 357888888887543111100 1111112233444455568889999999999999988765 4589999999
Q ss_pred hhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhcc
Q 024797 117 EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALL 196 (262)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L 196 (262)
+.+++.++++.. .++.++++|+.+++. + ++||+|++..+++|+ +......+++++.++|
T Consensus 77 ~~~~~~a~~~~~-------------~~~~~~~~d~~~~~~-----~-~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~L 135 (220)
T 3hnr_A 77 REMRMIAKEKLP-------------KEFSITEGDFLSFEV-----P-TSIDTIVSTYAFHHL--TDDEKNVAIAKYSQLL 135 (220)
T ss_dssp HHHHHHHHHHSC-------------TTCCEESCCSSSCCC-----C-SCCSEEEEESCGGGS--CHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCC-------------CceEEEeCChhhcCC-----C-CCeEEEEECcchhcC--ChHHHHHHHHHHHHhc
Confidence 999999998754 248899999998875 4 899999999999998 5555556999999999
Q ss_pred CCCcEEEEEeCC
Q 024797 197 RPGGTFIGTMPD 208 (262)
Q Consensus 197 ~~gG~li~~~~~ 208 (262)
+|||.+++..++
T Consensus 136 kpgG~l~i~~~~ 147 (220)
T 3hnr_A 136 NKGGKIVFADTI 147 (220)
T ss_dssp CTTCEEEEEEEC
T ss_pred CCCCEEEEEecc
Confidence 999999998654
No 12
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.80 E-value=2.8e-19 Score=145.52 Aligned_cols=141 Identities=18% Similarity=0.281 Sum_probs=95.6
Q ss_pred chhHHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEe
Q 024797 35 STKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGID 114 (262)
Q Consensus 35 ~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD 114 (262)
..+.+|+..++.|+........ .. ....+..++... ..++.+|||+|||+|.++..++.. ..+|+|+|
T Consensus 15 ~~~~~~~~~a~~~~~~~~~~~~--~~----~~~~~~~~l~~~-----~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD 82 (242)
T 3l8d_A 15 SAEKKWDSSAEFWNQNSQEMWD--SG----SRSTIIPFFEQY-----VKKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVD 82 (242)
T ss_dssp -----------------CHHHH--TS----TTTTHHHHHHHH-----SCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHhHHHHhhhhhhhccC--cc----cHHHHHHHHHHH-----cCCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEE
Confidence 3556888888888643322111 10 012222222222 357889999999999999988766 34899999
Q ss_pred CChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHh
Q 024797 115 IAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSA 194 (262)
Q Consensus 115 ~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~ 194 (262)
+|+.+++.++++.. ..++.++++|+.++++ ++++||+|++..+++|+ .++..+++++.+
T Consensus 83 ~s~~~~~~a~~~~~------------~~~~~~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~ 141 (242)
T 3l8d_A 83 ISEVMIQKGKERGE------------GPDLSFIKGDLSSLPF-----ENEQFEAIMAINSLEWT----EEPLRALNEIKR 141 (242)
T ss_dssp SCHHHHHHHHTTTC------------BTTEEEEECBTTBCSS-----CTTCEEEEEEESCTTSS----SCHHHHHHHHHH
T ss_pred CCHHHHHHHHhhcc------------cCCceEEEcchhcCCC-----CCCCccEEEEcChHhhc----cCHHHHHHHHHH
Confidence 99999999998753 4468999999998876 67899999999999998 567799999999
Q ss_pred ccCCCcEEEEEeCC
Q 024797 195 LLRPGGTFIGTMPD 208 (262)
Q Consensus 195 ~L~~gG~li~~~~~ 208 (262)
+|+|||.+++.+++
T Consensus 142 ~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 142 VLKSDGYACIAILG 155 (242)
T ss_dssp HEEEEEEEEEEEEC
T ss_pred HhCCCeEEEEEEcC
Confidence 99999999998753
No 13
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.80 E-value=2.2e-18 Score=140.27 Aligned_cols=147 Identities=21% Similarity=0.349 Sum_probs=111.0
Q ss_pred HHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChh
Q 024797 39 FARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEG 118 (262)
Q Consensus 39 ~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~ 118 (262)
.|+.+++.|+....... ....+..++...+... ..++.+|||+|||+|.++..+++.. .+++|+|+|+.
T Consensus 2 ~y~~~a~~yd~~~~~~~---------~~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~s~~ 70 (246)
T 1y8c_A 2 CYNKFAHIYDKLIRADV---------DYKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPKF-KNTWAVDLSQE 70 (246)
T ss_dssp CHHHHHHHHHHHTTCSC---------CHHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGGS-SEEEEECSCHH
T ss_pred hHHHHHHHHHHHccccc---------cHHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHHHHCC-CcEEEEECCHH
Confidence 47788888875332110 0223333344343322 2367899999999999999887653 47999999999
Q ss_pred HHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcc-cccccCCCHHHHHHHHHHHHhccC
Q 024797 119 SIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQF-AMHYSWSTEARARRALANVSALLR 197 (262)
Q Consensus 119 ~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~L~ 197 (262)
|++.|+++.... ..++.++++|+.+++. + ++||+|++.. +++|+ .+.++...+++++.++|+
T Consensus 71 ~~~~a~~~~~~~----------~~~~~~~~~d~~~~~~-----~-~~fD~v~~~~~~l~~~-~~~~~~~~~l~~~~~~L~ 133 (246)
T 1y8c_A 71 MLSEAENKFRSQ----------GLKPRLACQDISNLNI-----N-RKFDLITCCLDSTNYI-IDSDDLKKYFKAVSNHLK 133 (246)
T ss_dssp HHHHHHHHHHHT----------TCCCEEECCCGGGCCC-----S-CCEEEEEECTTGGGGC-CSHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHhhc----------CCCeEEEecccccCCc-----c-CCceEEEEcCcccccc-CCHHHHHHHHHHHHHhcC
Confidence 999999987631 2258999999988765 3 7899999998 99987 455788999999999999
Q ss_pred CCcEEEEEeCChHHHH
Q 024797 198 PGGTFIGTMPDANVII 213 (262)
Q Consensus 198 ~gG~li~~~~~~~~~~ 213 (262)
|||.+++++++...+.
T Consensus 134 pgG~l~~~~~~~~~~~ 149 (246)
T 1y8c_A 134 EGGVFIFDINSYYKLS 149 (246)
T ss_dssp EEEEEEEEEECHHHHH
T ss_pred CCcEEEEEecCHHHHH
Confidence 9999999999886543
No 14
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.79 E-value=1.4e-18 Score=143.10 Aligned_cols=139 Identities=16% Similarity=0.172 Sum_probs=105.6
Q ss_pred HHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHH-HHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCC
Q 024797 38 VFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLV-QLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIA 116 (262)
Q Consensus 38 ~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s 116 (262)
..|+..++.|+...... ......++..+.. .....++.+|||+|||+|.++..+++. ..+|+|+|+|
T Consensus 3 ~~~~~~a~~y~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s 70 (263)
T 2yqz_A 3 SALLRAAYAYDRLRAHP-----------PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDAD 70 (263)
T ss_dssp HHHHHHHHHHHHHHCCC-----------HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESC
T ss_pred CchHHHHHHHhhhcccC-----------hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECC
Confidence 57888999997543221 1112222222221 113457889999999999999988765 4589999999
Q ss_pred hhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhcc
Q 024797 117 EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALL 196 (262)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L 196 (262)
+.|++.++++.. ....++.+.++|+.++++ ++++||+|++..+++|+ .+...+++++.++|
T Consensus 71 ~~~~~~a~~~~~----------~~~~~~~~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L 131 (263)
T 2yqz_A 71 AAMLEVFRQKIA----------GVDRKVQVVQADARAIPL-----PDESVHGVIVVHLWHLV----PDWPKVLAEAIRVL 131 (263)
T ss_dssp HHHHHHHHHHTT----------TSCTTEEEEESCTTSCCS-----CTTCEEEEEEESCGGGC----TTHHHHHHHHHHHE
T ss_pred HHHHHHHHHHhh----------ccCCceEEEEcccccCCC-----CCCCeeEEEECCchhhc----CCHHHHHHHHHHHC
Confidence 999999999862 113469999999988775 67899999999999998 56789999999999
Q ss_pred CCCcEEEEEeC
Q 024797 197 RPGGTFIGTMP 207 (262)
Q Consensus 197 ~~gG~li~~~~ 207 (262)
+|||.+++..+
T Consensus 132 ~pgG~l~~~~~ 142 (263)
T 2yqz_A 132 KPGGALLEGWD 142 (263)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCcEEEEEec
Confidence 99999988744
No 15
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.79 E-value=4e-19 Score=142.12 Aligned_cols=118 Identities=14% Similarity=0.171 Sum_probs=97.0
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (262)
+...++..+...++ +|||+|||+|.++..+++....+++|+|+|+.+++.|++++... +...++.++++|+
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~--------~~~~~~~~~~~d~ 102 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADA--------NLNDRIQIVQGDV 102 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEECBT
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhc--------cccCceEEEEcCH
Confidence 34444544444444 99999999999999887764558999999999999999987632 2344699999999
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.++++ ++++||+|++..+++|+ +++..+++++.++|+|||.+++..+
T Consensus 103 ~~~~~-----~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 103 HNIPI-----EDNYADLIVSRGSVFFW----EDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp TBCSS-----CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHCCC-----CcccccEEEECchHhhc----cCHHHHHHHHHHhCCCCCEEEEEec
Confidence 98876 67899999999999998 6678899999999999999999754
No 16
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.79 E-value=5.2e-19 Score=144.21 Aligned_cols=106 Identities=16% Similarity=0.181 Sum_probs=91.6
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..+++.. ..|+|+|+|+.+++.|+++.. . ++.++++|+.++. +
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~------------~-~v~~~~~d~~~~~------~ 100 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF-NDITCVEASEEAISHAQGRLK------------D-GITYIHSRFEDAQ------L 100 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC-SCEEEEESCHHHHHHHHHHSC------------S-CEEEEESCGGGCC------C
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHHhhh------------C-CeEEEEccHHHcC------c
Confidence 467799999999999998887644 379999999999999999875 2 5899999998763 5
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHH-hccCCCcEEEEEeCChHHH
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVS-ALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~-~~L~~gG~li~~~~~~~~~ 212 (262)
+++||+|++..+++|+ +++..+++++. ++|+|||.+++.+++....
T Consensus 101 ~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~ 147 (250)
T 2p7i_A 101 PRRYDNIVLTHVLEHI----DDPVALLKRINDDWLAEGGRLFLVCPNANAV 147 (250)
T ss_dssp SSCEEEEEEESCGGGC----SSHHHHHHHHHHTTEEEEEEEEEEEECTTCH
T ss_pred CCcccEEEEhhHHHhh----cCHHHHHHHHHHHhcCCCCEEEEEcCChHHH
Confidence 7899999999999998 56689999999 9999999999999876543
No 17
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.79 E-value=1.7e-18 Score=145.06 Aligned_cols=135 Identities=18% Similarity=0.254 Sum_probs=103.4
Q ss_pred hhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEE
Q 024797 67 KKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARL 146 (262)
Q Consensus 67 ~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~ 146 (262)
..+..++... +...++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++....... ....++.+
T Consensus 43 ~~~~~~l~~~---l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~-----~~~~~~~~ 113 (293)
T 3thr_A 43 AEYKAWLLGL---LRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKE-----PAFDKWVI 113 (293)
T ss_dssp HHHHHHHHHH---HHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTS-----HHHHTCEE
T ss_pred HHHHHHHHHH---hcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccc-----cccceeeE
Confidence 3444444433 3345778999999999999998877644 8999999999999998875321110 01235788
Q ss_pred EeCcccccc---cccccCCCCCeeEEEEc-ccccccCC---CHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHHH
Q 024797 147 ICGDCYEVH---LDKVLADDAPFDICSCQ-FAMHYSWS---TEARARRALANVSALLRPGGTFIGTMPDANVIIKK 215 (262)
Q Consensus 147 ~~~d~~~~~---~~~~~~~~~~fD~V~~~-~~l~~~~~---~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~~ 215 (262)
.++|+..++ + ++++||+|++. .+++|+.+ +.+++..++++++++|+|||++++++++.+.+...
T Consensus 114 ~~~d~~~~~~~~~-----~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 184 (293)
T 3thr_A 114 EEANWLTLDKDVP-----AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILST 184 (293)
T ss_dssp EECCGGGHHHHSC-----CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHH
T ss_pred eecChhhCccccc-----cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHHhhc
Confidence 999988876 4 57899999998 89998832 13568999999999999999999999998877654
No 18
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.79 E-value=2.4e-19 Score=143.08 Aligned_cols=110 Identities=21% Similarity=0.297 Sum_probs=91.9
Q ss_pred HHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc
Q 024797 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (262)
Q Consensus 74 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (262)
..++.... .++.+|||+|||+|.++..+ +..+++|+|+|+.+++.++++.. ++.++++|+.+
T Consensus 27 ~~~l~~~~-~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~~--------------~~~~~~~d~~~ 88 (211)
T 2gs9_A 27 ERALKGLL-PPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRAP--------------EATWVRAWGEA 88 (211)
T ss_dssp HHHHHTTC-CCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHCT--------------TSEEECCCTTS
T ss_pred HHHHHHhc-CCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhCC--------------CcEEEEccccc
Confidence 33444433 37889999999999888766 33489999999999999998753 38899999988
Q ss_pred cccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 154 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
+++ ++++||+|++..+++|+ +++..+++++.++|+|||.+++.+++..
T Consensus 89 ~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 89 LPF-----PGESFDVVLLFTTLEFV----EDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp CCS-----CSSCEEEEEEESCTTTC----SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCC-----CCCcEEEEEEcChhhhc----CCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 776 67899999999999998 4678999999999999999999988764
No 19
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.79 E-value=6.7e-19 Score=145.97 Aligned_cols=119 Identities=25% Similarity=0.388 Sum_probs=99.2
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (262)
....++..+...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++.... +...++.++++|+
T Consensus 49 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~~~~~~~d~ 120 (273)
T 3bus_A 49 LTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAA--------GLANRVTFSYADA 120 (273)
T ss_dssp HHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEECCT
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhc--------CCCcceEEEECcc
Confidence 34455555556688999999999999999887754568999999999999999987632 2344699999999
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.++++ ++++||+|++..+++|+ .+...+++++.++|+|||.+++..+
T Consensus 121 ~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 121 MDLPF-----EDASFDAVWALESLHHM----PDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp TSCCS-----CTTCEEEEEEESCTTTS----SCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ccCCC-----CCCCccEEEEechhhhC----CCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 88876 67899999999999998 5568999999999999999998764
No 20
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.79 E-value=9.8e-19 Score=139.55 Aligned_cols=132 Identities=17% Similarity=0.169 Sum_probs=105.8
Q ss_pred cchhHHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEE
Q 024797 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGI 113 (262)
Q Consensus 34 ~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gv 113 (262)
.....+|+..+..|+..... ..++..++.. ..++.+|||+|||+|.++..+++. ...|+|+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~~----------------~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~v 71 (211)
T 3e23_A 11 DDTLRFYRGNATAYAERQPR----------------SATLTKFLGE--LPAGAKILELGCGAGYQAEAMLAA-GFDVDAT 71 (211)
T ss_dssp HHHHHHHHHSHHHHTTCCCC----------------CHHHHHHHTT--SCTTCEEEESSCTTSHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHHHhhccch----------------hHHHHHHHHh--cCCCCcEEEECCCCCHHHHHHHHc-CCeEEEE
Confidence 45667888888888643221 2223333332 246789999999999999988765 3489999
Q ss_pred eCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHH
Q 024797 114 DIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVS 193 (262)
Q Consensus 114 D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~ 193 (262)
|+|+.+++.++++.. +.+.++|+..++ ++++||+|++..+++|+ +.+++..+++++.
T Consensus 72 D~s~~~~~~a~~~~~---------------~~~~~~d~~~~~------~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~ 128 (211)
T 3e23_A 72 DGSPELAAEASRRLG---------------RPVRTMLFHQLD------AIDAYDAVWAHACLLHV--PRDELADVLKLIW 128 (211)
T ss_dssp ESCHHHHHHHHHHHT---------------SCCEECCGGGCC------CCSCEEEEEECSCGGGS--CHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcC---------------CceEEeeeccCC------CCCcEEEEEecCchhhc--CHHHHHHHHHHHH
Confidence 999999999998864 778899988776 47899999999999998 6678999999999
Q ss_pred hccCCCcEEEEEeC
Q 024797 194 ALLRPGGTFIGTMP 207 (262)
Q Consensus 194 ~~L~~gG~li~~~~ 207 (262)
++|+|||.+++.++
T Consensus 129 ~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 129 RALKPGGLFYASYK 142 (211)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEEc
Confidence 99999999999865
No 21
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.79 E-value=1.2e-18 Score=142.88 Aligned_cols=116 Identities=18% Similarity=0.146 Sum_probs=89.0
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCcccc--cccc------CCCCCeEEEeCccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHH--QRRK------KFSFPARLICGDCYEV 154 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~--~~~~------~~~~~v~~~~~d~~~~ 154 (262)
.++.+|||+|||+|..+..+++.+. .|+|+|+|+.|++.|+++........ .... ....+++++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4778999999999999998877654 89999999999999987653100000 0000 0135699999999988
Q ss_pred ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
+.. ..++||+|++..+++++ +.+++..+++++.++|+|||++++.
T Consensus 146 ~~~----~~~~FD~V~~~~~l~~l--~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 146 PRA----NIGKFDRIWDRGALVAI--NPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGG----CCCCEEEEEESSSTTTS--CGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred Ccc----cCCCEEEEEEhhhhhhC--CHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 751 13799999999999988 5567788999999999999998643
No 22
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.79 E-value=6.7e-19 Score=144.40 Aligned_cols=109 Identities=20% Similarity=0.285 Sum_probs=95.8
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++.. ..++.++++|+.++++
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------------~~~~~~~~~d~~~~~~----- 104 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT------------SPVVCYEQKAIEDIAI----- 104 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC------------CTTEEEEECCGGGCCC-----
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc------------cCCeEEEEcchhhCCC-----
Confidence 34788999999999999998887665589999999999999999865 3469999999988876
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
++++||+|++..+++|+ +++..+++++.++|+|||.++++++++..
T Consensus 105 ~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 150 (253)
T 3g5l_A 105 EPDAYNVVLSSLALHYI----ASFDDICKKVYINLKSSGSFIFSVEHPVF 150 (253)
T ss_dssp CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CCCCeEEEEEchhhhhh----hhHHHHHHHHHHHcCCCcEEEEEeCCCcc
Confidence 67899999999999998 66789999999999999999999888643
No 23
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.79 E-value=7.9e-19 Score=144.62 Aligned_cols=112 Identities=20% Similarity=0.310 Sum_probs=93.5
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
++..+...++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++....+ ..++.+.++|+.+++
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~---------~~~v~~~~~d~~~l~ 98 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNG---------HQQVEYVQGDAEQMP 98 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTT---------CCSEEEEECCC-CCC
T ss_pred HHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcC---------CCceEEEEecHHhCC
Confidence 4444556688999999999999888887654 489999999999999999876322 135899999999887
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+ ++++||+|++..+++|+ .++..++.++.++|+|||.+++..
T Consensus 99 ~-----~~~~fD~V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 99 F-----TDERFHIVTCRIAAHHF----PNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp S-----CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-----CCCCEEEEEEhhhhHhc----CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 6 67899999999999998 567899999999999999999864
No 24
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.78 E-value=5.2e-18 Score=138.20 Aligned_cols=108 Identities=16% Similarity=0.166 Sum_probs=91.5
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
++.+|||+|||+|.++..+++.....|+|+|+|+.+++.|+++....+ ..++.++++|+..++. ++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---------~~~~~~~~~d~~~~~~-----~~ 144 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG---------KRVRNYFCCGLQDFTP-----EP 144 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG---------GGEEEEEECCGGGCCC-----CS
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC---------CceEEEEEcChhhcCC-----CC
Confidence 578999999999999988876555689999999999999999876321 2348899999988775 56
Q ss_pred CCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++||+|++..+++|+ +.+....+++++.++|+|||.+++..+
T Consensus 145 ~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 145 DSYDVIWIQWVIGHL--TDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp SCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEEEEEEcchhhhC--CHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 789999999999998 555577999999999999999998654
No 25
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.78 E-value=8.8e-19 Score=142.61 Aligned_cols=109 Identities=24% Similarity=0.345 Sum_probs=94.3
Q ss_pred hccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
...++.+|||+|||+|.++..+++.+..+++|+|+|+.+++.|+++.. ..++.+.++|+..+++
T Consensus 40 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------------~~~~~~~~~d~~~~~~---- 103 (243)
T 3bkw_A 40 PEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP------------DTGITYERADLDKLHL---- 103 (243)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC------------SSSEEEEECCGGGCCC----
T ss_pred cccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc------------cCCceEEEcChhhccC----
Confidence 345788999999999999988877655589999999999999998765 2358999999988765
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
++++||+|++..+++|+ ++...+++++.++|+|||.+++.+++..
T Consensus 104 -~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 148 (243)
T 3bkw_A 104 -PQDSFDLAYSSLALHYV----EDVARLFRTVHQALSPGGHFVFSTEHPI 148 (243)
T ss_dssp -CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred -CCCCceEEEEecccccc----chHHHHHHHHHHhcCcCcEEEEEeCCcc
Confidence 57899999999999998 4678999999999999999999998764
No 26
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.78 E-value=5.1e-18 Score=136.00 Aligned_cols=122 Identities=19% Similarity=0.149 Sum_probs=94.2
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (262)
++..+...++.+|||+|||+|.++..+++. +...++|+|+|+.+++.|++++...+... ....++.++++|+...
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPR----NQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCH----HHHTTEEEEECCTTSC
T ss_pred HHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCc----ccCcceEEEeCCcccc
Confidence 333344467889999999999999988774 33589999999999999999876322110 0012699999998766
Q ss_pred ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
+. +.++||+|++..+++|+ +.++...+++++.++|+|||.++++ ++.
T Consensus 97 ~~-----~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~li~~-~~~ 143 (217)
T 3jwh_A 97 DK-----RFHGYDAATVIEVIEHL--DLSRLGAFERVLFEFAQPKIVIVTT-PNI 143 (217)
T ss_dssp CG-----GGCSCSEEEEESCGGGC--CHHHHHHHHHHHHTTTCCSEEEEEE-EBH
T ss_pred cc-----cCCCcCEEeeHHHHHcC--CHHHHHHHHHHHHHHcCCCEEEEEc-cCc
Confidence 54 45789999999999998 6667799999999999999955554 443
No 27
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.78 E-value=2.7e-18 Score=141.96 Aligned_cols=108 Identities=18% Similarity=0.254 Sum_probs=93.2
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.|+++.... +...+++++++|+.++++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~----- 110 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQS--------GLQNRVTGIVGSMDDLPF----- 110 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEECCTTSCCC-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHc--------CCCcCcEEEEcChhhCCC-----
Confidence 4678899999999999999988775668999999999999999987632 334569999999988876
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++++||+|++..+++|+ + +..+++++.++|+|||.+++..+
T Consensus 111 ~~~~fD~i~~~~~~~~~--~---~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 111 RNEELDLIWSEGAIYNI--G---FERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp CTTCEEEEEESSCGGGT--C---HHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CCCCEEEEEEcCCceec--C---HHHHHHHHHHHcCCCCEEEEEEe
Confidence 67899999999999987 3 57899999999999999998764
No 28
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.78 E-value=2.8e-18 Score=137.22 Aligned_cols=106 Identities=15% Similarity=0.092 Sum_probs=90.5
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..++.. ..+++|+|+|+.+++.+++. . ..++.++++|+.++ .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~-~------------~~~~~~~~~d~~~~-~----- 103 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGRH-G------------LDNVEFRQQDLFDW-T----- 103 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGGG-C------------CTTEEEEECCTTSC-C-----
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhc-C------------CCCeEEEecccccC-C-----
Confidence 456779999999999999888776 44899999999999999872 1 24599999999877 3
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
++++||+|++..+++|+ +.+....+++++.++|+|||.+++..++.
T Consensus 104 ~~~~~D~v~~~~~l~~~--~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 104 PDRQWDAVFFAHWLAHV--PDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp CSSCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCCceeEEEEechhhcC--CHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 67899999999999998 55567999999999999999999987654
No 29
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=6.8e-19 Score=145.22 Aligned_cols=129 Identities=15% Similarity=0.223 Sum_probs=95.6
Q ss_pred HHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChh
Q 024797 39 FARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEG 118 (262)
Q Consensus 39 ~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~ 118 (262)
+|+.++..|+..... ...+...++..+...++.+|||+|||+|.++..+++ ...+|+|+|+|+.
T Consensus 4 ~y~~~a~~y~~~~~~---------------~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~ 67 (261)
T 3ege_A 4 IYNSIGKQYSQTRVP---------------DIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIV 67 (261)
T ss_dssp ---------CCSBCC---------------CHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHH
T ss_pred HHHHHHHHHhhcccc---------------cHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHH
Confidence 678888888643221 112344455555556889999999999999998876 4458999999999
Q ss_pred HHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCC
Q 024797 119 SIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRP 198 (262)
Q Consensus 119 ~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~ 198 (262)
|++.++++. ++.++++|+.++++ ++++||+|++..+++|+ .++..+++++.++|+
T Consensus 68 ~~~~a~~~~---------------~~~~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~Lk- 122 (261)
T 3ege_A 68 MRQQAVVHP---------------QVEWFTGYAENLAL-----PDKSVDGVISILAIHHF----SHLEKSFQEMQRIIR- 122 (261)
T ss_dssp HHHSSCCCT---------------TEEEECCCTTSCCS-----CTTCBSEEEEESCGGGC----SSHHHHHHHHHHHBC-
T ss_pred HHHHHHhcc---------------CCEEEECchhhCCC-----CCCCEeEEEEcchHhhc----cCHHHHHHHHHHHhC-
Confidence 998876543 49999999988876 67899999999999998 678899999999999
Q ss_pred CcEEEEEeCC
Q 024797 199 GGTFIGTMPD 208 (262)
Q Consensus 199 gG~li~~~~~ 208 (262)
||.+++..++
T Consensus 123 gG~~~~~~~~ 132 (261)
T 3ege_A 123 DGTIVLLTFD 132 (261)
T ss_dssp SSCEEEEEEC
T ss_pred CcEEEEEEcC
Confidence 9988777654
No 30
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.77 E-value=2.2e-18 Score=141.19 Aligned_cols=123 Identities=25% Similarity=0.438 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEE
Q 024797 68 KLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI 147 (262)
Q Consensus 68 ~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~ 147 (262)
....++..++......++.+|||+|||+|.++..+++.+ ..|+|+|+|+.|++.|+++.... ..++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~----------~~~v~~~ 93 (252)
T 1wzn_A 25 AEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERG-YEVVGLDLHEEMLRVARRKAKER----------NLKIEFL 93 (252)
T ss_dssp HHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHT----------TCCCEEE
T ss_pred HHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhc----------CCceEEE
Confidence 334556666665555677899999999999999887654 48999999999999999987632 2358999
Q ss_pred eCcccccccccccCCCCCeeEEEEcc-cccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 148 CGDCYEVHLDKVLADDAPFDICSCQF-AMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 148 ~~d~~~~~~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
++|+.+++. .++||+|++.+ .++|+ +.++...+++++.++|+|||.+++.+++.
T Consensus 94 ~~d~~~~~~------~~~fD~v~~~~~~~~~~--~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 148 (252)
T 1wzn_A 94 QGDVLEIAF------KNEFDAVTMFFSTIMYF--DEEDLRKLFSKVAEALKPGGVFITDFPCW 148 (252)
T ss_dssp ESCGGGCCC------CSCEEEEEECSSGGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEEC-
T ss_pred ECChhhccc------CCCccEEEEcCCchhcC--CHHHHHHHHHHHHHHcCCCeEEEEeccch
Confidence 999988764 46899999875 44554 66788999999999999999999988763
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.77 E-value=1.4e-18 Score=142.72 Aligned_cols=117 Identities=21% Similarity=0.251 Sum_probs=97.0
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
+..++..+...++.+|||+|||+|..+..+++.....++|+|+|+.+++.|+++.... +...++.+.++|+.
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~--------~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEEL--------GVSERVHFIHNDAA 96 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEESCCT
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc--------CCCcceEEEECChH
Confidence 4445555566788999999999999998887654458999999999999999987632 22346999999998
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
+++. +++||+|++..+++|+ .++..+++++.++|+|||.+++..+
T Consensus 97 ~~~~------~~~fD~V~~~~~~~~~----~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 97 GYVA------NEKCDVAACVGATWIA----GGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp TCCC------SSCEEEEEEESCGGGT----SSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred hCCc------CCCCCEEEECCChHhc----CCHHHHHHHHHHHcCCCeEEEEecC
Confidence 8753 5789999999999988 4678999999999999999999764
No 32
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.77 E-value=3.1e-18 Score=139.33 Aligned_cols=141 Identities=20% Similarity=0.319 Sum_probs=106.7
Q ss_pred HHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChh
Q 024797 39 FARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEG 118 (262)
Q Consensus 39 ~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~ 118 (262)
.|+.+++.|+..... .....|...++..+ .++.+|||+|||+|.++..+++. .+++|+|+|+.
T Consensus 3 ~y~~~a~~yd~~~~~-------------~~~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~ 65 (243)
T 3d2l_A 3 AYEQFAYVYDELMQD-------------VPYPEWVAWVLEQV--EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEE 65 (243)
T ss_dssp ---CTTHHHHHHTTT-------------CCHHHHHHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHH
T ss_pred hHHHHHHHHHHhhhc-------------ccHHHHHHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHH
Confidence 466777788643211 12234444444433 46789999999999998888655 68999999999
Q ss_pred HHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcc-cccccCCCHHHHHHHHHHHHhccC
Q 024797 119 SIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQF-AMHYSWSTEARARRALANVSALLR 197 (262)
Q Consensus 119 ~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~L~ 197 (262)
+++.|+++.... ..++.++++|+.+++. .++||+|++.. +++|+ .+.++...+++++.++|+
T Consensus 66 ~~~~a~~~~~~~----------~~~~~~~~~d~~~~~~------~~~fD~v~~~~~~~~~~-~~~~~~~~~l~~~~~~L~ 128 (243)
T 3d2l_A 66 MLEIAQEKAMET----------NRHVDFWVQDMRELEL------PEPVDAITILCDSLNYL-QTEADVKQTFDSAARLLT 128 (243)
T ss_dssp HHHHHHHHHHHT----------TCCCEEEECCGGGCCC------SSCEEEEEECTTGGGGC-CSHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHhhhhc----------CCceEEEEcChhhcCC------CCCcCEEEEeCCchhhc-CCHHHHHHHHHHHHHhcC
Confidence 999999987521 2458999999988764 37899999987 88876 456788999999999999
Q ss_pred CCcEEEEEeCChHHHH
Q 024797 198 PGGTFIGTMPDANVII 213 (262)
Q Consensus 198 ~gG~li~~~~~~~~~~ 213 (262)
|||.+++++++...+.
T Consensus 129 pgG~l~~~~~~~~~~~ 144 (243)
T 3d2l_A 129 DGGKLLFDVHSPYKME 144 (243)
T ss_dssp EEEEEEEEEECHHHHH
T ss_pred CCeEEEEEcCCHHHHH
Confidence 9999999999886643
No 33
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.77 E-value=5.8e-18 Score=135.81 Aligned_cols=117 Identities=19% Similarity=0.204 Sum_probs=91.5
Q ss_pred HhccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
+...++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.|++++...+... ....+++++++|+...+.
T Consensus 25 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~~~~~v~~~~~d~~~~~~-- 98 (219)
T 3jwg_A 25 LKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPE----MQRKRISLFQSSLVYRDK-- 98 (219)
T ss_dssp HHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCH----HHHTTEEEEECCSSSCCG--
T ss_pred HhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhcccc----ccCcceEEEeCccccccc--
Confidence 334578899999999999999887643 3589999999999999999876321110 001269999999976665
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+.++||+|++..+++|+ +.++...+++++.++|+|||.++ .+++
T Consensus 99 ---~~~~fD~V~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~~i-~~~~ 142 (219)
T 3jwg_A 99 ---RFSGYDAATVIEVIEHL--DENRLQAFEKVLFEFTRPQTVIV-STPN 142 (219)
T ss_dssp ---GGTTCSEEEEESCGGGC--CHHHHHHHHHHHHTTTCCSEEEE-EEEB
T ss_pred ---ccCCCCEEEEHHHHHhC--CHHHHHHHHHHHHHhhCCCEEEE-Eccc
Confidence 46899999999999998 66677899999999999999555 4444
No 34
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.77 E-value=1.6e-18 Score=142.86 Aligned_cols=117 Identities=20% Similarity=0.248 Sum_probs=99.9
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
...++..+...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++... ..++.++++|+.
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----------~~~~~~~~~d~~ 112 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG-----------NNKIIFEANDIL 112 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS-----------CTTEEEEECCTT
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc-----------CCCeEEEECccc
Confidence 444555555668889999999999999988775345899999999999999998752 156999999999
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++++ ++++||+|++..+++|+ +..++..+++++.++|+|||.+++..+
T Consensus 113 ~~~~-----~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 113 TKEF-----PENNFDLIYSRDAILAL--SLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp TCCC-----CTTCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCC-----CCCcEEEEeHHHHHHhc--ChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8876 67899999999999998 778999999999999999999998864
No 35
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=4.6e-18 Score=136.08 Aligned_cols=111 Identities=17% Similarity=0.180 Sum_probs=93.7
Q ss_pred hccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
...++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++... ..++.++++|+.+++
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~-----------~~~~~~~~~d~~~~~----- 110 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKR-----------WSHISWAATDILQFS----- 110 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTT-----------CSSEEEEECCTTTCC-----
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhccc-----------CCCeEEEEcchhhCC-----
Confidence 34567899999999999999887654 4899999999999999998763 226999999998876
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
++++||+|++..+++|+ .+.+....+++++.++|+|||.++++++...
T Consensus 111 -~~~~fD~v~~~~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 158 (216)
T 3ofk_A 111 -TAELFDLIVVAEVLYYL-EDMTQMRTAIDNMVKMLAPGGHLVFGSARDA 158 (216)
T ss_dssp -CSCCEEEEEEESCGGGS-SSHHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred -CCCCccEEEEccHHHhC-CCHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 36899999999999997 3456678899999999999999999876554
No 36
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.77 E-value=1.1e-17 Score=137.78 Aligned_cols=142 Identities=18% Similarity=0.175 Sum_probs=106.8
Q ss_pred chhHHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEe
Q 024797 35 STKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGID 114 (262)
Q Consensus 35 ~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD 114 (262)
.....++.+++.|+... .... .......+..++.... .++.+|||+|||+|.++..+++. ...++|+|
T Consensus 16 ~~~~~~~~~a~~Yd~~~-~~~~---------~~~~~~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD 83 (260)
T 2avn_A 16 RSWEFYDRIARAYDSMY-ETPK---------WKLYHRLIGSFLEEYL-KNPCRVLDLGGGTGKWSLFLQER-GFEVVLVD 83 (260)
T ss_dssp CHHHHHHHHHHHHGGGG-CSHH---------HHHHHHHHHHHHHHHC-CSCCEEEEETCTTCHHHHHHHTT-TCEEEEEE
T ss_pred hhcchhhHHHHHHHHhc-cccc---------hhHHHHHHHHHHHHhc-CCCCeEEEeCCCcCHHHHHHHHc-CCeEEEEe
Confidence 45678999999997544 1111 1122223344444433 37789999999999999988765 34899999
Q ss_pred CChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHh
Q 024797 115 IAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSA 194 (262)
Q Consensus 115 ~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~ 194 (262)
+|+.|++.|+++.. ..++++|+.++++ ++++||+|++..++.|+.. ++..+++++.+
T Consensus 84 ~s~~~l~~a~~~~~---------------~~~~~~d~~~~~~-----~~~~fD~v~~~~~~~~~~~---~~~~~l~~~~~ 140 (260)
T 2avn_A 84 PSKEMLEVAREKGV---------------KNVVEAKAEDLPF-----PSGAFEAVLALGDVLSYVE---NKDKAFSEIRR 140 (260)
T ss_dssp SCHHHHHHHHHHTC---------------SCEEECCTTSCCS-----CTTCEEEEEECSSHHHHCS---CHHHHHHHHHH
T ss_pred CCHHHHHHHHhhcC---------------CCEEECcHHHCCC-----CCCCEEEEEEcchhhhccc---cHHHHHHHHHH
Confidence 99999999998754 1278999988775 6789999999887766532 27889999999
Q ss_pred ccCCCcEEEEEeCChHH
Q 024797 195 LLRPGGTFIGTMPDANV 211 (262)
Q Consensus 195 ~L~~gG~li~~~~~~~~ 211 (262)
+|+|||.+++.+++...
T Consensus 141 ~LkpgG~l~~~~~~~~~ 157 (260)
T 2avn_A 141 VLVPDGLLIATVDNFYT 157 (260)
T ss_dssp HEEEEEEEEEEEEBHHH
T ss_pred HcCCCeEEEEEeCChHH
Confidence 99999999999988753
No 37
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.77 E-value=2.7e-18 Score=141.85 Aligned_cols=136 Identities=17% Similarity=0.200 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHh---ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccc----------
Q 024797 69 LNNWIKSVLVQLY---ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQ---------- 135 (262)
Q Consensus 69 ~~~~~~~~l~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~---------- 135 (262)
..+|....+..+. ..++.+|||||||+|.++..++..+..+|+|+|+|+.|++.|++++........
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~ 116 (263)
T 2a14_A 37 MLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACE 116 (263)
T ss_dssp HHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHh
Confidence 5667766665543 346789999999999877766555555799999999999999987653210000
Q ss_pred ----------cccCCCCCeE-EEeCccccc-ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEE
Q 024797 136 ----------RRKKFSFPAR-LICGDCYEV-HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (262)
Q Consensus 136 ----------~~~~~~~~v~-~~~~d~~~~-~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li 203 (262)
.......++. ++++|+.+. ++... ..++||+|++++++||+..+.++...++++++++|||||.|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~--~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li 194 (263)
T 2a14_A 117 LEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPA--VLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLV 194 (263)
T ss_dssp HTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTC--CCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCCcchhhHHHHHHhhhheEEeccccCCCCCCcc--ccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 0000011243 889998773 22100 256899999999999976667888999999999999999999
Q ss_pred EEe
Q 024797 204 GTM 206 (262)
Q Consensus 204 ~~~ 206 (262)
++.
T Consensus 195 ~~~ 197 (263)
T 2a14_A 195 TTV 197 (263)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 38
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.77 E-value=2.2e-18 Score=144.72 Aligned_cols=118 Identities=19% Similarity=0.152 Sum_probs=98.0
Q ss_pred HHHHHHHH----hccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEe
Q 024797 73 IKSVLVQL----YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC 148 (262)
Q Consensus 73 ~~~~l~~~----~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~ 148 (262)
...++..+ ...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++.... +...++.+++
T Consensus 67 ~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~~~~~~ 138 (297)
T 2o57_A 67 DEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQA--------GLADNITVKY 138 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHH--------TCTTTEEEEE
T ss_pred HHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc--------CCCcceEEEE
Confidence 34455555 45678899999999999999887653348999999999999999987532 2345699999
Q ss_pred CcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 149 GDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 149 ~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
+|+.++++ ++++||+|++..+++|+ .++..+++++.++|+|||.+++..+
T Consensus 139 ~d~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 139 GSFLEIPC-----EDNSYDFIWSQDAFLHS----PDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp CCTTSCSS-----CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCcccCCC-----CCCCEeEEEecchhhhc----CCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 99998876 67899999999999998 4478999999999999999998864
No 39
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.77 E-value=1.3e-18 Score=142.77 Aligned_cols=141 Identities=11% Similarity=0.010 Sum_probs=101.5
Q ss_pred hhHHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeC
Q 024797 36 TKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDI 115 (262)
Q Consensus 36 ~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~ 115 (262)
..+.|+.++..|.+..... ....|+..++..+...++.+|||+|||+|.++..+++.. ..|+|+|+
T Consensus 10 ~a~~wd~~a~~f~~~~~~~-------------~~~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g-~~V~gvD~ 75 (261)
T 3iv6_A 10 KAEAWELIGNQFWTIGRVA-------------ARPSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERG-ASVTVFDF 75 (261)
T ss_dssp THHHHHTTTTHHHHTSCGG-------------GSCCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTT-CEEEEEES
T ss_pred hhhHHHHHHHHHHHHhhcc-------------ccHHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcC-CEEEEEEC
Confidence 4467777777776432211 012345556666667788999999999999999887654 48999999
Q ss_pred ChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhc
Q 024797 116 AEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSAL 195 (262)
Q Consensus 116 s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~ 195 (262)
|+.|++.|+++.... +++.++.+.+.......+++||+|+++.+++|+ ..++...++.++.++
T Consensus 76 S~~ml~~Ar~~~~~~---------------~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~--~~~~~~~~l~~l~~l 138 (261)
T 3iv6_A 76 SQRMCDDLAEALADR---------------CVTIDLLDITAEIPKELAGHFDFVLNDRLINRF--TTEEARRACLGMLSL 138 (261)
T ss_dssp CHHHHHHHHHHTSSS---------------CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGS--CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc---------------cceeeeeecccccccccCCCccEEEEhhhhHhC--CHHHHHHHHHHHHHh
Confidence 999999999987621 223333332210000025789999999999998 677888999999999
Q ss_pred cCCCcEEEEEeCC
Q 024797 196 LRPGGTFIGTMPD 208 (262)
Q Consensus 196 L~~gG~li~~~~~ 208 (262)
| |||.++++++.
T Consensus 139 L-PGG~l~lS~~~ 150 (261)
T 3iv6_A 139 V-GSGTVRASVKL 150 (261)
T ss_dssp H-TTSEEEEEEEB
T ss_pred C-cCcEEEEEecc
Confidence 9 99999998753
No 40
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.77 E-value=3.8e-18 Score=140.07 Aligned_cols=108 Identities=19% Similarity=0.223 Sum_probs=92.7
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|..+..+++....+|+|+|+|+.+++.|+++.... +...++.++++|+.++++
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~~~~d~~~~~~----- 110 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKA--------NCADRVKGITGSMDNLPF----- 110 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEECCTTSCSS-----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHc--------CCCCceEEEECChhhCCC-----
Confidence 4577899999999999999988765559999999999999999987742 234469999999988876
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++++||+|++..+++|+ + ...+++++.++|+|||.+++..+
T Consensus 111 ~~~~fD~v~~~~~l~~~--~---~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 111 QNEELDLIWSEGAIYNI--G---FERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp CTTCEEEEEEESCSCCC--C---HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCCEEEEEecChHhhc--C---HHHHHHHHHHHcCCCcEEEEEEe
Confidence 67899999999999987 2 57899999999999999999864
No 41
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.76 E-value=9.2e-18 Score=133.49 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=93.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|..+..++.....+++|+|+|+.|++.|+++.... ..++.+.++|+.++++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------~~~~~~~~~d~~~~~~----- 85 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN----------NFKLNISKGDIRKLPF----- 85 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH----------TCCCCEEECCTTSCCS-----
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc----------CCceEEEECchhhCCC-----
Confidence 3567899999999999865554444558999999999999999887521 2358899999988775
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
++++||+|++..+++|+ +.+++..+++++.++|+|||.+++.+++.
T Consensus 86 ~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 86 KDESMSFVYSYGTIFHM--RKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp CTTCEEEEEECSCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred CCCceeEEEEcChHHhC--CHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 67899999999999988 67889999999999999999999987654
No 42
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.75 E-value=1.4e-17 Score=132.88 Aligned_cols=120 Identities=19% Similarity=0.217 Sum_probs=99.2
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..+++....+++|+|+|+.+++.++++... ..++.++++|+.++++ +
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~-----------~~~i~~~~~d~~~~~~-----~ 104 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH-----------VPQLRWETMDVRKLDF-----P 104 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT-----------CTTCEEEECCTTSCCS-----C
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc-----------CCCcEEEEcchhcCCC-----C
Confidence 67889999999999999988776555899999999999999998752 2358999999988765 5
Q ss_pred CCCeeEEEEcccccccC-----------CCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHHHHhh
Q 024797 163 DAPFDICSCQFAMHYSW-----------STEARARRALANVSALLRPGGTFIGTMPDANVIIKKLRE 218 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~-----------~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~~~~~ 218 (262)
+++||+|++..+++++. ....+...+++++.++|+|||.+++.+++...+...+..
T Consensus 105 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 171 (215)
T 2pxx_A 105 SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHFRTRHYA 171 (215)
T ss_dssp SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHHHHHHHC
T ss_pred CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHHHHHHHh
Confidence 78999999998887662 114678999999999999999999999887665555443
No 43
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.75 E-value=4.7e-18 Score=136.24 Aligned_cols=115 Identities=19% Similarity=0.183 Sum_probs=96.3
Q ss_pred HHHHHHhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 75 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
.++..+...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++....+ ..++.++++|+.
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---------~~~~~~~~~d~~ 98 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG---------LKNVEVLKSEEN 98 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT---------CTTEEEEECBTT
T ss_pred HHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC---------CCcEEEEecccc
Confidence 3455555678889999999999999988774 34589999999999999999876321 125999999998
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++++ ++++||+|++..+++|+ .++..+++++.++|+|||.+++..+
T Consensus 99 ~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~i~~~ 144 (219)
T 3dh0_A 99 KIPL-----PDNTVDFIFMAFTFHEL----SEPLKFLEELKRVAKPFAYLAIIDW 144 (219)
T ss_dssp BCSS-----CSSCEEEEEEESCGGGC----SSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCC-----CCCCeeEEEeehhhhhc----CCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 8776 67899999999999998 5678999999999999999998753
No 44
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.75 E-value=8e-18 Score=141.68 Aligned_cols=120 Identities=16% Similarity=0.100 Sum_probs=97.6
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (262)
.+..++..+...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++.... +...++.+.++|+
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~ 131 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEV--------DSPRRKEVRIQGW 131 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHS--------CCSSCEEEEECCG
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--------CCCCceEEEECCH
Confidence 34455555556788899999999999999888762368999999999999999988732 3345699999998
Q ss_pred cccccccccCCCCCeeEEEEcccccccCC-----CHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWS-----TEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~-----~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.++ +++||+|++..+++|+.+ +.++...+++++.++|+|||.+++...
T Consensus 132 ~~~--------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 132 EEF--------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp GGC--------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred HHc--------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 764 478999999999999843 225678999999999999999998764
No 45
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.75 E-value=6.7e-18 Score=137.43 Aligned_cols=113 Identities=21% Similarity=0.356 Sum_probs=94.8
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
.+..+...++.+|||+|||+|.++..++... ..|+|+|+|+.+++.++++....+ ..++.+.++|+..++
T Consensus 13 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~---------~~~v~~~~~d~~~~~ 82 (239)
T 1xxl_A 13 MIKTAECRAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKG---------VENVRFQQGTAESLP 82 (239)
T ss_dssp HHHHHTCCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHT---------CCSEEEEECBTTBCC
T ss_pred HHHHhCcCCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcC---------CCCeEEEecccccCC
Confidence 4455567788999999999999988887654 489999999999999998875321 135899999998877
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
+ ++++||+|++..+++|+ .++..++.++.++|+|||.+++..+
T Consensus 83 ~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 83 F-----PDDSFDIITCRYAAHHF----SDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp S-----CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-----CCCcEEEEEECCchhhc----cCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 6 67899999999999998 5678999999999999999998753
No 46
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.75 E-value=4.5e-18 Score=136.74 Aligned_cols=146 Identities=17% Similarity=0.193 Sum_probs=104.9
Q ss_pred cchhHHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEE
Q 024797 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGI 113 (262)
Q Consensus 34 ~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gv 113 (262)
.....+|+..++.|++....... ......+...++..+...++.+|||+|||+|.++..++.. ..+|+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~v 80 (227)
T 3e8s_A 11 DALLDSWHQNAQAWIDAVRHGAI---------ESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALADR-GIEAVGV 80 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC---------HHHHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEE
T ss_pred HHHHHHHHhhHHHHHHHhccccc---------ccccccccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEE
Confidence 34567888888888753221100 0111112334455555567799999999999999888766 4489999
Q ss_pred eCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHH
Q 024797 114 DIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVS 193 (262)
Q Consensus 114 D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~ 193 (262)
|+|+.+++.|+++. ++.+.++|+.++.... ..+..+||+|++..+++ . .++..+++++.
T Consensus 81 D~s~~~~~~a~~~~---------------~~~~~~~~~~~~~~~~-~~~~~~fD~v~~~~~l~-~----~~~~~~l~~~~ 139 (227)
T 3e8s_A 81 DGDRTLVDAARAAG---------------AGEVHLASYAQLAEAK-VPVGKDYDLICANFALL-H----QDIIELLSAMR 139 (227)
T ss_dssp ESCHHHHHHHHHTC---------------SSCEEECCHHHHHTTC-SCCCCCEEEEEEESCCC-S----SCCHHHHHHHH
T ss_pred cCCHHHHHHHHHhc---------------ccccchhhHHhhcccc-cccCCCccEEEECchhh-h----hhHHHHHHHHH
Confidence 99999999999862 2678888887762110 01345699999999998 4 45678999999
Q ss_pred hccCCCcEEEEEeCChH
Q 024797 194 ALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 194 ~~L~~gG~li~~~~~~~ 210 (262)
++|+|||.+++.+++..
T Consensus 140 ~~L~pgG~l~~~~~~~~ 156 (227)
T 3e8s_A 140 TLLVPGGALVIQTLHPW 156 (227)
T ss_dssp HTEEEEEEEEEEECCTT
T ss_pred HHhCCCeEEEEEecCcc
Confidence 99999999999988653
No 47
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.75 E-value=2.3e-17 Score=138.01 Aligned_cols=122 Identities=18% Similarity=0.176 Sum_probs=85.7
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccc--------ccc-ccCC------------CC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADH--------HQR-RKKF------------SF 142 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--------~~~-~~~~------------~~ 142 (262)
++.+|||+|||+|.....++......|+|+|+|+.|++.|++++...... +-. .... ..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 67899999999998444333334558999999999999999876421000 000 0000 00
Q ss_pred CeEEEeCcccc-cccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 143 PARLICGDCYE-VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 143 ~v~~~~~d~~~-~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.+.++++|+.+ +++.....++++||+|+++++++|+..+.+++..+++++.++|||||.|++.
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 14577789877 5542211245779999999999996444578999999999999999999886
No 48
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.74 E-value=1e-17 Score=138.21 Aligned_cols=103 Identities=24% Similarity=0.372 Sum_probs=88.4
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++.. ++.++++|+.+++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~------ 107 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF-GTVEGLELSADMLAIARRRNP--------------DAVLHHGDMRDFSL------ 107 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS-SEEEEEESCHHHHHHHHHHCT--------------TSEEEECCTTTCCC------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCC--------------CCEEEECChHHCCc------
Confidence 466899999999999999887653 489999999999999998754 48999999988764
Q ss_pred CCCeeEEEEcc-cccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 163 DAPFDICSCQF-AMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 163 ~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
+++||+|++.. +++|+ .+.++...+++++.++|+|||.+++...
T Consensus 108 ~~~fD~v~~~~~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 108 GRRFSAVTCMFSSIGHL-AGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp SCCEEEEEECTTGGGGS-CHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred cCCcCEEEEcCchhhhc-CCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 68899999998 99987 3446788999999999999999999743
No 49
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.74 E-value=7.7e-18 Score=137.09 Aligned_cols=104 Identities=21% Similarity=0.274 Sum_probs=88.7
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc--cccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV--HLDKVL 160 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~ 160 (262)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++ +.++++|+.+. ++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~-----------------~~~~~~d~~~~~~~~---- 97 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK-----------------FNVVKSDAIEYLKSL---- 97 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT-----------------SEEECSCHHHHHHTS----
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh-----------------cceeeccHHHHhhhc----
Confidence 5678999999999999988876543 799999999999999864 56788888765 44
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
++++||+|++..+++|+ +.++...+++++.++|+|||.+++.+++...
T Consensus 98 -~~~~fD~i~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 145 (240)
T 3dli_A 98 -PDKYLDGVMISHFVEHL--DPERLFELLSLCYSKMKYSSYIVIESPNPTS 145 (240)
T ss_dssp -CTTCBSEEEEESCGGGS--CGGGHHHHHHHHHHHBCTTCCEEEEEECTTS
T ss_pred -CCCCeeEEEECCchhhC--CcHHHHHHHHHHHHHcCCCcEEEEEeCCcch
Confidence 57899999999999998 5556799999999999999999999887653
No 50
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.74 E-value=2.9e-17 Score=138.03 Aligned_cols=125 Identities=19% Similarity=0.218 Sum_probs=98.1
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (262)
+...++..+. .++.+|||+|||+|.++..+++.. ..|+|+|+|+.+++.|+++....+.. ...++.++++|+
T Consensus 71 ~~~~~~~~~~-~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~------~~~~v~~~~~d~ 142 (299)
T 3g2m_A 71 EAREFATRTG-PVSGPVLELAAGMGRLTFPFLDLG-WEVTALELSTSVLAAFRKRLAEAPAD------VRDRCTLVQGDM 142 (299)
T ss_dssp HHHHHHHHHC-CCCSCEEEETCTTTTTHHHHHTTT-CCEEEEESCHHHHHHHHHHHHTSCHH------HHTTEEEEECBT
T ss_pred HHHHHHHhhC-CCCCcEEEEeccCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHhhcccc------cccceEEEeCch
Confidence 3444444443 344599999999999999887663 47999999999999999988732110 014699999999
Q ss_pred cccccccccCCCCCeeEEEEc-ccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHH
Q 024797 152 YEVHLDKVLADDAPFDICSCQ-FAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~-~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
.+++. +++||+|++. .+++|+ +.++...+++++.++|+|||.|++.+++....
T Consensus 143 ~~~~~------~~~fD~v~~~~~~~~~~--~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 143 SAFAL------DKRFGTVVISSGSINEL--DEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp TBCCC------SCCEEEEEECHHHHTTS--CHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred hcCCc------CCCcCEEEECCcccccC--CHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 98764 6889999876 556665 66788999999999999999999999887664
No 51
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.74 E-value=1.5e-17 Score=134.98 Aligned_cols=105 Identities=26% Similarity=0.372 Sum_probs=88.5
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..+++... +++|+|+|+.|++.|+++.. ++.++++|+.+++.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~------ 97 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP--------------DATLHQGDMRDFRL------ 97 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT--------------TCEEEECCTTTCCC------
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC--------------CCEEEECCHHHccc------
Confidence 5778999999999999998876543 89999999999999998754 38899999988753
Q ss_pred CCCeeEEEEcc-cccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 163 DAPFDICSCQF-AMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 163 ~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
+++||+|+|.. +++|+ .+.++...+++++.++|+|||.++++.++.
T Consensus 98 ~~~~D~v~~~~~~~~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 98 GRKFSAVVSMFSSVGYL-KTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp SSCEEEEEECTTGGGGC-CSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CCCCcEEEEcCchHhhc-CCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 57899999655 78776 455788999999999999999999987554
No 52
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.74 E-value=1.6e-17 Score=140.57 Aligned_cols=108 Identities=15% Similarity=0.239 Sum_probs=92.9
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++.... ++..++.++++|+.++++
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~----- 181 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRAREL--------RIDDHVRSRVCNMLDTPF----- 181 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEECCTTSCCC-----
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--------CCCCceEEEECChhcCCC-----
Confidence 4578899999999999999887753458999999999999999987742 234569999999998876
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++++||+|++..+++|+ + +..+++++.++|+|||.+++.++
T Consensus 182 ~~~~fD~V~~~~~l~~~--~---~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYV--D---LHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp CTTCEEEEEEESCGGGS--C---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEeEEEECCchhhC--C---HHHHHHHHHHHcCCCcEEEEEEc
Confidence 67899999999999987 3 78999999999999999998764
No 53
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.73 E-value=1.8e-17 Score=138.38 Aligned_cols=118 Identities=17% Similarity=0.181 Sum_probs=95.5
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
+..++..+...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++.... +...++.+.++|+.
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~--------~~~~~~~~~~~d~~ 124 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANS--------ENLRSKRVLLAGWE 124 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTC--------CCCSCEEEEESCGG
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--------CCCCCeEEEECChh
Confidence 3444545556678899999999999999887533348999999999999999987632 22346899999986
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++ + ++||+|++..+++|+ +.+++..+++++.++|+|||.+++..+.
T Consensus 125 ~~-------~-~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 125 QF-------D-EPVDRIVSIGAFEHF--GHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp GC-------C-CCCSEEEEESCGGGT--CTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred hC-------C-CCeeEEEEeCchhhc--ChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 54 3 789999999999998 4466889999999999999999987653
No 54
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.73 E-value=1.2e-17 Score=138.97 Aligned_cols=109 Identities=26% Similarity=0.434 Sum_probs=92.7
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
++..+...++.+|||+|||+|.++..++. ....|+|+|+|+.|++.++++.. ++.+.++|+..++
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~ 113 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNYP--------------HLHFDVADARNFR 113 (279)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHCT--------------TSCEEECCTTTCC
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhCC--------------CCEEEECChhhCC
Confidence 34444456788999999999999998877 55689999999999999998753 4889999998876
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
+ +++||+|++..+++|+ .++..+++++.++|+|||.+++.+++.
T Consensus 114 ~------~~~fD~v~~~~~l~~~----~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 114 V------DKPLDAVFSNAMLHWV----KEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp C------SSCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred c------CCCcCEEEEcchhhhC----cCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 4 5789999999999998 567899999999999999999988754
No 55
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.73 E-value=8.3e-18 Score=146.22 Aligned_cols=115 Identities=23% Similarity=0.330 Sum_probs=91.2
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-----
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV----- 154 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~----- 154 (262)
..++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.|++++........ ......++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-g~~~~~~v~~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFF-GSPSRSNVRFLKGFIENLATAEP 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHH-SSTTCCCEEEEESCTTCGGGCBS
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcc-cccCCCceEEEEccHHHhhhccc
Confidence 457889999999999998888764 456899999999999999987642100000 000124699999999886
Q ss_pred -ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 155 -HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 155 -~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
++ ++++||+|+++.+++|+ .++..+++++.++|||||+|++..
T Consensus 160 ~~~-----~~~~fD~V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 160 EGV-----PDSSVDIVISNCVCNLS----TNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCC-----CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCC-----CCCCEEEEEEccchhcC----CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 44 67899999999999998 557899999999999999999875
No 56
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.73 E-value=7.2e-17 Score=126.60 Aligned_cols=112 Identities=17% Similarity=0.105 Sum_probs=91.4
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|++++... +. .+++++++|+.++... .+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~-~~v~~~~~d~~~~~~~---~~ 110 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEAL--------GL-SGATLRRGAVAAVVAA---GT 110 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHH--------TC-SCEEEEESCHHHHHHH---CC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHc--------CC-CceEEEEccHHHHHhh---cc
Confidence 578899999999999998777766668999999999999999987632 22 4699999999876421 03
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHh--ccCCCcEEEEEeCCh
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSA--LLRPGGTFIGTMPDA 209 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~--~L~~gG~li~~~~~~ 209 (262)
+++||+|+++..+++ ..++...++..+.+ +|+|||.+++..+..
T Consensus 111 ~~~fD~i~~~~p~~~---~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 111 TSPVDLVLADPPYNV---DSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp SSCCSEEEECCCTTS---CHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCccEEEECCCCCc---chhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 678999999887765 24678899999999 999999999987654
No 57
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.73 E-value=6.1e-17 Score=130.31 Aligned_cols=111 Identities=26% Similarity=0.398 Sum_probs=93.1
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..++.... +++|+|+|+.+++.|+++.... ..+++++++|+.++++ +
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~----------~~~~~~~~~d~~~~~~-----~ 100 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSR----------ESNVEFIVGDARKLSF-----E 100 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT----------TCCCEEEECCTTSCCS-----C
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc----------CCCceEEECchhcCCC-----C
Confidence 4578999999999999988876544 8999999999999999987521 2468999999988765 5
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
+++||+|++..++++. ...+...+++++.++|+|||.+++..++...
T Consensus 101 ~~~~D~v~~~~~~~~~--~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 147 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVHF--EPLELNQVFKEVRRVLKPSGKFIMYFTDLRE 147 (227)
T ss_dssp TTCEEEEEEESCGGGC--CHHHHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CCcEEEEEEcCchHhC--CHHHHHHHHHHHHHHcCCCcEEEEEecChHH
Confidence 6899999999985544 4578899999999999999999999887644
No 58
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=2e-17 Score=134.41 Aligned_cols=110 Identities=19% Similarity=0.170 Sum_probs=87.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc--ccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV--HLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~ 159 (262)
..++.+|||+|||+|.++..++.....+|+|+|+|+.|++.|+++.... ..++.++++|+.++ ++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~----------~~~v~~~~~d~~~~~~~~--- 124 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ----------THKVIPLKGLWEDVAPTL--- 124 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGC----------SSEEEEEESCHHHHGGGS---
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhc----------CCCeEEEecCHHHhhccc---
Confidence 4578899999999999998886655558999999999999999987621 34689999999887 55
Q ss_pred cCCCCCeeEEEE-cccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 160 LADDAPFDICSC-QFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 160 ~~~~~~fD~V~~-~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
++++||+|++ .+.+........+...++++++++|||||++++..
T Consensus 125 --~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 125 --PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp --CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred --CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 6789999999 55432111123566788999999999999998754
No 59
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.72 E-value=7.6e-18 Score=136.93 Aligned_cols=108 Identities=19% Similarity=0.138 Sum_probs=86.1
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||||||+|..+..+++....+++|||+|+.+++.|+++.... ..++.++.+|+...... .
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~----------~~~~~~~~~~a~~~~~~---~ 124 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ----------THKVIPLKGLWEDVAPT---L 124 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGC----------SSEEEEEESCHHHHGGG---S
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhC----------CCceEEEeehHHhhccc---c
Confidence 4678899999999998888887655568999999999999999987632 44578889988654321 1
Q ss_pred CCCCeeEEEEc-----ccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 162 DDAPFDICSCQ-----FAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 162 ~~~~fD~V~~~-----~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
++++||.|+.. ..++|. .+...++++++|+|||||+|++..
T Consensus 125 ~~~~FD~i~~D~~~~~~~~~~~----~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 125 PDGHFDGILYDTYPLSEETWHT----HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CTTCEEEEEECCCCCBGGGTTT----HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccCCceEEEeeeecccchhhh----cchhhhhhhhhheeCCCCEEEEEe
Confidence 67889999853 344555 788999999999999999998753
No 60
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.72 E-value=1.5e-17 Score=134.84 Aligned_cols=117 Identities=18% Similarity=0.215 Sum_probs=93.4
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
+..++..... ++.+|||+|||+|.++..++. ....|+|+|+|+.+++.|+++.... ....++.++++|+.
T Consensus 56 l~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~ 125 (235)
T 3lcc_A 56 IVHLVDTSSL-PLGRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSS--------PKAEYFSFVKEDVF 125 (235)
T ss_dssp HHHHHHTTCS-CCEEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTS--------GGGGGEEEECCCTT
T ss_pred HHHHHHhcCC-CCCCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhcc--------CCCcceEEEECchh
Confidence 3334433332 445999999999999988865 4447999999999999999988632 12346999999998
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
+++ ++++||+|++..+++|+ +.++...+++++.++|+|||.+++...
T Consensus 126 ~~~------~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 126 TWR------PTELFDLIFDYVFFCAI--EPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp TCC------CSSCEEEEEEESSTTTS--CGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCC------CCCCeeEEEEChhhhcC--CHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 865 35699999999999998 556889999999999999999988654
No 61
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.72 E-value=5.6e-17 Score=126.66 Aligned_cols=126 Identities=13% Similarity=0.129 Sum_probs=92.4
Q ss_pred hhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEE
Q 024797 67 KKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARL 146 (262)
Q Consensus 67 ~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~ 146 (262)
.....+.+.++.. ...++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++.... +. .++++
T Consensus 6 ~~~~~~~~~~l~~-~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~--------~~-~~v~~ 74 (185)
T 3mti_A 6 KRPIHMSHDFLAE-VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDL--------GI-ENTEL 74 (185)
T ss_dssp CCHHHHHHHHHHT-TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHH--------TC-CCEEE
T ss_pred HhHHHHHHHHHHH-hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHc--------CC-CcEEE
Confidence 3444555555543 3467899999999999999988766 668999999999999999988632 22 46899
Q ss_pred EeCcccccccccccCCCCCeeEEEEccc-ccc----cCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 147 ICGDCYEVHLDKVLADDAPFDICSCQFA-MHY----SWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 147 ~~~d~~~~~~~~~~~~~~~fD~V~~~~~-l~~----~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++.++..++.. .+++||+|+++.. +++ +.........+++++.++|+|||.+++.+.
T Consensus 75 ~~~~~~~l~~~----~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 75 ILDGHENLDHY----VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EESCGGGGGGT----CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EeCcHHHHHhh----ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 99887765421 4678999988732 221 011346677889999999999999988765
No 62
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=2.1e-17 Score=135.79 Aligned_cols=111 Identities=20% Similarity=0.263 Sum_probs=93.6
Q ss_pred HHHHHHHhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 74 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
..++..+...++.+|||+|||+|.++..++.. +..+++|+|+|+.|++.++++.. ++.++++|+.
T Consensus 23 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~--------------~~~~~~~d~~ 88 (259)
T 2p35_A 23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLP--------------NTNFGKADLA 88 (259)
T ss_dssp HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHST--------------TSEEEECCTT
T ss_pred HHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCC--------------CcEEEECChh
Confidence 34555555567889999999999999888764 35589999999999999998733 4889999998
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+++ ++++||+|++..+++|+ +++..+++++.++|+|||.+++.+++
T Consensus 89 ~~~------~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 89 TWK------PAQKADLLYANAVFQWV----PDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp TCC------CSSCEEEEEEESCGGGS----TTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hcC------ccCCcCEEEEeCchhhC----CCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 765 36789999999999998 56889999999999999999998864
No 63
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.72 E-value=4.2e-17 Score=130.91 Aligned_cols=132 Identities=17% Similarity=0.228 Sum_probs=100.3
Q ss_pred chhHHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEe
Q 024797 35 STKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGID 114 (262)
Q Consensus 35 ~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD 114 (262)
.+..+|+..++.|+....... ......+. .+... .++.+|||+|||+|.++..++.. +|+|
T Consensus 12 ~~~~~~~~~~~~y~~~~~~~~-----------~~~~~~~~-~l~~~--~~~~~vLDiG~G~G~~~~~l~~~-----~~vD 72 (219)
T 1vlm_A 12 HMWHIFERFVNEYERWFLVHR-----------FAYLSELQ-AVKCL--LPEGRGVEIGVGTGRFAVPLKIK-----IGVE 72 (219)
T ss_dssp CTTHHHHHTHHHHHHHHHHTH-----------HHHHHHHH-HHHHH--CCSSCEEEETCTTSTTHHHHTCC-----EEEE
T ss_pred hheeecchhHHHHHHHHHhcc-----------hhHHHHHH-HHHHh--CCCCcEEEeCCCCCHHHHHHHHH-----hccC
Confidence 455688888888875432211 11111122 22222 24789999999999998887543 9999
Q ss_pred CChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHh
Q 024797 115 IAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSA 194 (262)
Q Consensus 115 ~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~ 194 (262)
+|+.+++.++++ . +.++++|+..+++ ++++||+|++..+++|+ +++..+++++.+
T Consensus 73 ~s~~~~~~a~~~-~---------------~~~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~ 127 (219)
T 1vlm_A 73 PSERMAEIARKR-G---------------VFVLKGTAENLPL-----KDESFDFALMVTTICFV----DDPERALKEAYR 127 (219)
T ss_dssp SCHHHHHHHHHT-T---------------CEEEECBTTBCCS-----CTTCEEEEEEESCGGGS----SCHHHHHHHHHH
T ss_pred CCHHHHHHHHhc-C---------------CEEEEcccccCCC-----CCCCeeEEEEcchHhhc----cCHHHHHHHHHH
Confidence 999999999875 2 7889999988775 57899999999999998 557899999999
Q ss_pred ccCCCcEEEEEeCChH
Q 024797 195 LLRPGGTFIGTMPDAN 210 (262)
Q Consensus 195 ~L~~gG~li~~~~~~~ 210 (262)
+|+|||.+++.+++..
T Consensus 128 ~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 128 ILKKGGYLIVGIVDRE 143 (219)
T ss_dssp HEEEEEEEEEEEECSS
T ss_pred HcCCCcEEEEEEeCCc
Confidence 9999999999887653
No 64
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.72 E-value=2.1e-17 Score=137.13 Aligned_cols=109 Identities=23% Similarity=0.378 Sum_probs=93.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.|+++....+ ..++.++++|+..+++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---------~~~~~~~~~d~~~~~~---- 101 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG---------IKNVKFLQANIFSLPF---- 101 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---------CCSEEEEECCGGGCCS----
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---------CCCcEEEEcccccCCC----
Confidence 3578899999999999998887753 5689999999999999999876322 2359999999998876
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++++||+|++..+++|+ .++..+++++.++|+|||.+++..++
T Consensus 102 -~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 102 -EDSSFDHIFVCFVLEHL----QSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp -CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CCCCeeEEEEechhhhc----CCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 67899999999999998 45678999999999999999997643
No 65
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.72 E-value=3.7e-17 Score=128.84 Aligned_cols=108 Identities=16% Similarity=0.137 Sum_probs=89.7
Q ss_pred hccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
...++.+|||+|||+|.++..++.. ..+++|+|+|+.+++.++++....+ ..++.+.++|+.+++.
T Consensus 29 ~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---------~~~~~~~~~d~~~~~~---- 94 (199)
T 2xvm_A 29 KVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIEN---------LDNLHTRVVDLNNLTF---- 94 (199)
T ss_dssp TTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHT---------CTTEEEEECCGGGCCC----
T ss_pred hccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCC---------CCCcEEEEcchhhCCC----
Confidence 3456789999999999999888766 3489999999999999998875311 1258999999988653
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+++||+|++..+++|+ +.++...+++++.++|+|||.+++..
T Consensus 95 --~~~~D~v~~~~~l~~~--~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 95 --DRQYDFILSTVVLMFL--EAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp --CCCEEEEEEESCGGGS--CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --CCCceEEEEcchhhhC--CHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 5789999999999998 55578999999999999999977653
No 66
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.72 E-value=3.5e-17 Score=137.56 Aligned_cols=112 Identities=14% Similarity=0.186 Sum_probs=90.6
Q ss_pred hccCCCeEEEecCCCCcchHHHHh--cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 81 YARRGDVVLDLACGKGGDLIKWDK--AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~G~~~~~l~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
...++.+|||+|||+|..+..++. ....+|+|+|+|+.+++.|+++.... .+...++.++++|+.++++..
T Consensus 33 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~~~~~v~~~~~d~~~~~~~~ 105 (299)
T 3g5t_A 33 HDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS-------PDTYKNVSFKISSSDDFKFLG 105 (299)
T ss_dssp CCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC-------C-CCTTEEEEECCTTCCGGGC
T ss_pred hcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc-------cCCCCceEEEEcCHHhCCccc
Confidence 345788999999999999999886 45678999999999999999987631 012457999999999887621
Q ss_pred -ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024797 159 -VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 159 -~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
.....++||+|++..+++|+ ++..+++++.++|+|||.+++
T Consensus 106 ~~~~~~~~fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 106 ADSVDKQKIDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTTTSSCEEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccCCCeeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEE
Confidence 00012799999999999986 467899999999999999987
No 67
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.72 E-value=4.1e-17 Score=136.17 Aligned_cols=107 Identities=21% Similarity=0.331 Sum_probs=92.2
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-C-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (262)
..++.+|||+|||+|..+..++.. + ..+|+|+|+|+.+++.|+++.... +.++.+.++|+.++++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------~~~v~~~~~d~~~~~~--- 86 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL----------PYDSEFLEGDATEIEL--- 86 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS----------SSEEEEEESCTTTCCC---
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc----------CCceEEEEcchhhcCc---
Confidence 357889999999999999888764 2 358999999999999999987632 3369999999998764
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+++||+|++..+++|+ .+...+++++.++|+|||.+++..++
T Consensus 87 ---~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 ---NDKYDIAICHAFLLHM----TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ---SSCEEEEEEESCGGGC----SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ---CCCeeEEEECChhhcC----CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 4689999999999998 56689999999999999999998887
No 68
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=1.9e-17 Score=135.10 Aligned_cols=112 Identities=12% Similarity=0.052 Sum_probs=90.7
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..+++... +|+|+|+|+.|++.|+++.. ..++.++++|+.+++......
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~------------~~~~~~~~~d~~~~~~~~~~~ 120 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT------------AANISYRLLDGLVPEQAAQIH 120 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC------------CTTEEEEECCTTCHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc------------ccCceEEECcccccccccccc
Confidence 35778999999999999999877555 89999999999999999875 336999999998865421110
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
....||+|++..+++|+ +.++...+++++.++|+|||.+++....
T Consensus 121 ~~~~~d~v~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 121 SEIGDANIYMRTGFHHI--PVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHCSCEEEEESSSTTS--CGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cccCccEEEEcchhhcC--CHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 11348999999999998 5557899999999999999997776543
No 69
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.72 E-value=1.4e-16 Score=132.01 Aligned_cols=114 Identities=16% Similarity=0.035 Sum_probs=89.4
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHH-hcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWD-KAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (262)
.++.-+......++.+|||||||+|.++..++ +....+|+|+|+|++|++.|++++... +. .+++++++|
T Consensus 110 l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~--------gl-~~v~~v~gD 180 (298)
T 3fpf_A 110 LLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL--------GV-DGVNVITGD 180 (298)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH--------TC-CSEEEEESC
T ss_pred HHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc--------CC-CCeEEEECc
Confidence 33333444556789999999999998765443 335568999999999999999987632 23 569999999
Q ss_pred ccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+.+++ +++||+|++.... ++..++++++.++|||||++++...+
T Consensus 181 a~~l~-------d~~FDvV~~~a~~-------~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 181 ETVID-------GLEFDVLMVAALA-------EPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp GGGGG-------GCCCSEEEECTTC-------SCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred hhhCC-------CCCcCEEEECCCc-------cCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 98753 5789999986542 45788999999999999999987754
No 70
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.71 E-value=6.3e-17 Score=136.40 Aligned_cols=113 Identities=20% Similarity=0.303 Sum_probs=93.7
Q ss_pred HhccCCCeEEEecCCCCcchHHHH--hcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWD--KAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (262)
....++.+|||+|||+|..+..++ ..+..+|+|+|+|+.+++.|+++.... +...+++++++|+.++++
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~- 184 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH--------ALAGQITLHRQDAWKLDT- 184 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS--------TTGGGEEEEECCGGGCCC-
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc--------CCCCceEEEECchhcCCc-
Confidence 345688999999999999988874 344568999999999999999998743 223459999999998875
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
+ ++||+|++..+++|+ ++......+++++.++|+|||.+++...
T Consensus 185 ----~-~~fD~v~~~~~~~~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 185 ----R-EGYDLLTSNGLNIYE-PDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp ----C-SCEEEEECCSSGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred ----c-CCeEEEEECChhhhc-CCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4 899999999999886 4555566799999999999999999873
No 71
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.71 E-value=5.8e-17 Score=137.35 Aligned_cols=118 Identities=12% Similarity=0.130 Sum_probs=95.9
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
+..++..+...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++.... +...++.+.++|+.
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~ 150 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASI--------DTNRSRQVLLQGWE 150 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTS--------CCSSCEEEEESCGG
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--------CCCCceEEEECChH
Confidence 3444444555678899999999999998887652348999999999999999987632 22346899999986
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+++ ++||+|++..+++|+ +.+++..+++++.++|+|||.+++.++.
T Consensus 151 ~~~--------~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 151 DFA--------EPVDRIVSIEAFEHF--GHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp GCC--------CCCSEEEEESCGGGT--CGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred HCC--------CCcCEEEEeChHHhc--CHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 642 689999999999998 5567899999999999999999988753
No 72
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.71 E-value=1.9e-17 Score=127.50 Aligned_cols=102 Identities=15% Similarity=0.233 Sum_probs=86.9
Q ss_pred HhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (262)
+...++.+|||+|||+|.++..+++... +++|+|+|+.+++.++++.. ++.+.++| .++
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~--------------~v~~~~~d---~~~--- 71 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKFD--------------SVITLSDP---KEI--- 71 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHCT--------------TSEEESSG---GGS---
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhCC--------------CcEEEeCC---CCC---
Confidence 3456788999999999999998876543 89999999999999998732 48899998 444
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++++||+|++..+++|+ +++..+++++.++|+|||.+++..+.
T Consensus 72 --~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 72 --PDNSVDFILFANSFHDM----DDKQHVISEVKRILKDDGRVIIIDWR 114 (170)
T ss_dssp --CTTCEEEEEEESCSTTC----SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --CCCceEEEEEccchhcc----cCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 57899999999999998 56789999999999999999988643
No 73
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.71 E-value=1.2e-16 Score=129.12 Aligned_cols=116 Identities=20% Similarity=0.242 Sum_probs=94.8
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.++++....+... ....++.+.++|+..+++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~d~~~~~~----- 97 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQ----KTGGKAEFKVENASSLSF----- 97 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCS----SSSCEEEEEECCTTSCCS-----
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCcc----ccCcceEEEEecccccCC-----
Confidence 357889999999999999988776 4489999999999999999887433211 112358999999988876
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++++||+|++..+++|+ .+......+++++.++|+|||.+++..+.
T Consensus 98 ~~~~~D~v~~~~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 98 HDSSFDFAVMQAFLTSV-PDPKERSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp CTTCEEEEEEESCGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCCceeEEEEcchhhcC-CCHHHHHHHHHHHHHHcCCCeEEEEEECC
Confidence 67899999999999987 34555669999999999999999998653
No 74
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.71 E-value=1.7e-16 Score=145.96 Aligned_cols=134 Identities=17% Similarity=0.204 Sum_probs=104.8
Q ss_pred chhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcC--CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCC
Q 024797 66 LKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFP 143 (262)
Q Consensus 66 ~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 143 (262)
......++..++..+...++.+|||+|||+|.++..+++.. ...|+|+|+|+.|++.|++++...... . .....+
T Consensus 703 PPL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnA--k-r~gl~n 779 (950)
T 3htx_A 703 PPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNK--E-ACNVKS 779 (950)
T ss_dssp SCHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTT--T-CSSCSE
T ss_pred chHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccch--h-hcCCCc
Confidence 34444556666666666688999999999999999887654 258999999999999999865421000 0 011246
Q ss_pred eEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 144 ARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 144 v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
++++++|+.+++. ++++||+|++..+++|+ +......+++++.++|+|| .+++++|+.+
T Consensus 780 VefiqGDa~dLp~-----~d~sFDlVV~~eVLeHL--~dp~l~~~L~eI~RvLKPG-~LIISTPN~e 838 (950)
T 3htx_A 780 ATLYDGSILEFDS-----RLHDVDIGTCLEVIEHM--EEDQACEFGEKVLSLFHPK-LLIVSTPNYE 838 (950)
T ss_dssp EEEEESCTTSCCT-----TSCSCCEEEEESCGGGS--CHHHHHHHHHHHHHTTCCS-EEEEEECBGG
T ss_pred eEEEECchHhCCc-----ccCCeeEEEEeCchhhC--ChHHHHHHHHHHHHHcCCC-EEEEEecCch
Confidence 9999999999876 67899999999999999 6666678999999999999 9999998864
No 75
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.71 E-value=7.4e-17 Score=134.64 Aligned_cols=106 Identities=16% Similarity=0.171 Sum_probs=90.6
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..+++.+. .|+|+|+|+.+++.|+++.... +.++.++++|+.+.+.
T Consensus 118 ~~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~----------~~~~~~~~~d~~~~~~----- 181 (286)
T 3m70_A 118 IISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKE----------NLNISTALYDINAANI----- 181 (286)
T ss_dssp HSCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCGGGCCC-----
T ss_pred ccCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHc----------CCceEEEEeccccccc-----
Confidence 34788999999999999998877644 8999999999999999987632 2269999999988763
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+++||+|++..+++|+ +.+....+++++.++|+|||.+++..
T Consensus 182 -~~~fD~i~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 182 -QENYDFIVSTVVFMFL--NRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp -CSCEEEEEECSSGGGS--CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -cCCccEEEEccchhhC--CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6889999999999998 66678899999999999999977654
No 76
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.71 E-value=9.6e-17 Score=132.15 Aligned_cols=123 Identities=14% Similarity=0.169 Sum_probs=90.1
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCcccc-----------cc---------ccCCCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHH-----------QR---------RKKFSF 142 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-----------~~---------~~~~~~ 142 (262)
.++.+|||+|||+|.++..++......|+|+|+|+.|++.|++++...+... .. ...+..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 4567999999999999888766554589999999999999998876321000 00 000001
Q ss_pred Ce-EEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 143 PA-RLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 143 ~v-~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
++ .+.++|+.+...... ...++||+|++..+++++....+++..+++++.++|+|||.+++..
T Consensus 135 ~v~~~~~~d~~~~~~~~~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGG-VSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HEEEEEECCTTSSSTTTT-CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCc-cccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 26 899999887542100 0227899999999999665555789999999999999999999875
No 77
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.71 E-value=7.4e-17 Score=135.20 Aligned_cols=127 Identities=21% Similarity=0.273 Sum_probs=92.7
Q ss_pred CCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccc-----------------------------
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADH----------------------------- 133 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~----------------------------- 133 (262)
++.+|||||||+|.++..++.. +..+|+|+|+|+.|++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 6789999999999999988875 4568999999999999999987643211
Q ss_pred --------------------cccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccC--CCHHHHHHHHHH
Q 024797 134 --------------------HQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSW--STEARARRALAN 191 (262)
Q Consensus 134 --------------------~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--~~~~~~~~~l~~ 191 (262)
+......+.++.|.++|+............++||+|+|..+++|+. .+.+.+..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0011123357999999987644110111468999999999997651 023478899999
Q ss_pred HHhccCCCcEEEEEeCChH
Q 024797 192 VSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 192 ~~~~L~~gG~li~~~~~~~ 210 (262)
++++|+|||+|++......
T Consensus 206 ~~~~LkpGG~lil~~~~~~ 224 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWS 224 (292)
T ss_dssp HHHHEEEEEEEEEECCCHH
T ss_pred HHHHhCCCcEEEEecCCch
Confidence 9999999999999876543
No 78
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=2.3e-16 Score=123.58 Aligned_cols=106 Identities=25% Similarity=0.314 Sum_probs=91.3
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..++.. ..+++|+|+|+.+++.++++.. ++.++++|+.++++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~--------------~~~~~~~d~~~~~~----- 103 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDFP--------------EARWVVGDLSVDQI----- 103 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCT--------------TSEEEECCTTTSCC-----
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhCC--------------CCcEEEcccccCCC-----
Confidence 467889999999999999888766 4489999999999999998764 38899999988765
Q ss_pred CCCCeeEEEEc-ccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 162 DDAPFDICSCQ-FAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 162 ~~~~fD~V~~~-~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
++++||+|++. .+++|+ +.++...++.++.++|+|||.+++.+++.
T Consensus 104 ~~~~~D~i~~~~~~~~~~--~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 104 SETDFDLIVSAGNVMGFL--AEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp CCCCEEEEEECCCCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred CCCceeEEEECCcHHhhc--ChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 56889999998 678776 67778999999999999999999987653
No 79
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.70 E-value=1.8e-16 Score=124.96 Aligned_cols=127 Identities=19% Similarity=0.271 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeE
Q 024797 68 KLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPAR 145 (262)
Q Consensus 68 ~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~ 145 (262)
....+...++ .....++.+|||+|||+|.++..+++. +.++|+|+|+|+.+++.|++++...+ ...++.
T Consensus 7 ~~~~~~~~~~-~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--------~~~~v~ 77 (197)
T 3eey_A 7 NSLGQSHDYI-KMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN--------LIDRVT 77 (197)
T ss_dssp CHHHHHHHHH-HHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT--------CGGGEE
T ss_pred hHHHHHHHHH-HhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--------CCCCeE
Confidence 3333344333 334577889999999999999988775 45689999999999999999887422 234699
Q ss_pred EEeCcccccccccccCCCCCeeEEEEcccc-----cccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 146 LICGDCYEVHLDKVLADDAPFDICSCQFAM-----HYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 146 ~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l-----~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++++|+.+++.. .+++||+|+++..+ +.......+...+++++.++|+|||.+++...
T Consensus 78 ~~~~d~~~~~~~----~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 78 LIKDGHQNMDKY----IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EECSCGGGGGGT----CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEECCHHHHhhh----ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 999998877521 45889999988755 11223456777899999999999999998864
No 80
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.70 E-value=6.3e-17 Score=135.59 Aligned_cols=115 Identities=9% Similarity=-0.030 Sum_probs=81.5
Q ss_pred cCCCeEEEecCCCCcchHHHH----hc-CCCe--EEEEeCChhHHHHHHHHhccCccccccccCCCCCe--EEEeCcccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWD----KA-KIGY--YVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPA--RLICGDCYE 153 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~----~~-~~~~--v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v--~~~~~d~~~ 153 (262)
.++.+|||||||+|.++..++ .. +... ++|+|+|++|++.|+++.... ....++ .+.++++.+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~--------~~~~~v~~~~~~~~~~~ 122 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT--------SNLENVKFAWHKETSSE 122 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC--------SSCTTEEEEEECSCHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc--------cCCCcceEEEEecchhh
Confidence 456799999999997654332 22 3333 499999999999999987521 011234 345666554
Q ss_pred ccccc-ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 154 VHLDK-VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 154 ~~~~~-~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
++... ..+++++||+|++..+++|+ +++..++++++++|||||.+++...+.
T Consensus 123 ~~~~~~~~~~~~~fD~V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 123 YQSRMLEKKELQKWDFIHMIQMLYYV----KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp HHHHHHTTTCCCCEEEEEEESCGGGC----SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred hhhhhccccCCCceeEEEEeeeeeec----CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 33100 00146889999999999998 678899999999999999999876543
No 81
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.70 E-value=7.8e-16 Score=122.28 Aligned_cols=114 Identities=18% Similarity=0.197 Sum_probs=90.9
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
++..+...++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++.... +...++.++++|+.+..
T Consensus 47 ~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~--------g~~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 47 TLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTY--------GLSPRMRAVQGTAPAAL 117 (204)
T ss_dssp HHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEESCTTGGG
T ss_pred HHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--------CCCCCEEEEeCchhhhc
Confidence 444555678899999999999999988876 668999999999999999987632 22336999999998732
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHH
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
. ..+.||+|++..++. .. +++++.++|+|||.+++.....+.+
T Consensus 118 ~-----~~~~~D~v~~~~~~~--------~~-~l~~~~~~LkpgG~lv~~~~~~~~~ 160 (204)
T 3njr_A 118 A-----DLPLPEAVFIGGGGS--------QA-LYDRLWEWLAPGTRIVANAVTLESE 160 (204)
T ss_dssp T-----TSCCCSEEEECSCCC--------HH-HHHHHHHHSCTTCEEEEEECSHHHH
T ss_pred c-----cCCCCCEEEECCccc--------HH-HHHHHHHhcCCCcEEEEEecCcccH
Confidence 2 345799999877441 34 8999999999999999998876544
No 82
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.69 E-value=1.9e-16 Score=125.25 Aligned_cols=107 Identities=14% Similarity=0.140 Sum_probs=88.5
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++ +|||+|||+|.++..+++.. .+++|+|+|+.+++.|+++.... ..++.+.++|+.++++ +
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~----------~~~~~~~~~d~~~~~~-----~ 91 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLG-YEVTAVDQSSVGLAKAKQLAQEK----------GVKITTVQSNLADFDI-----V 91 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTT-CEEEEECSSHHHHHHHHHHHHHH----------TCCEEEECCBTTTBSC-----C
T ss_pred CCC-CEEEECCCCCHhHHHHHhCC-CeEEEEECCHHHHHHHHHHHHhc----------CCceEEEEcChhhcCC-----C
Confidence 456 99999999999998887653 48999999999999999987521 2258999999988775 5
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
+++||+|++.. .|+ ..++...+++++.++|+|||.+++.+++..
T Consensus 92 ~~~fD~v~~~~--~~~--~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 92 ADAWEGIVSIF--CHL--PSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp TTTCSEEEEEC--CCC--CHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred cCCccEEEEEh--hcC--CHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 78999999853 344 667899999999999999999999986543
No 83
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.69 E-value=5.4e-16 Score=121.38 Aligned_cols=122 Identities=17% Similarity=0.217 Sum_probs=97.3
Q ss_pred HHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCC-CeEEEeC
Q 024797 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF-PARLICG 149 (262)
Q Consensus 71 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~v~~~~~ 149 (262)
.....++..+...++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.++++....+ ... ++.++++
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~--------~~~~~~~~~~~ 109 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNN--------LDNYDIRVVHS 109 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTT--------CTTSCEEEEEC
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcC--------CCccceEEEEC
Confidence 34444555555567889999999999999988776 5689999999999999999876321 111 3899999
Q ss_pred cccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 150 d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
|+.+.. ++++||+|+++..+++ .......+++++.++|+|||.+++.+++..
T Consensus 110 d~~~~~------~~~~~D~v~~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 110 DLYENV------KDRKYNKIITNPPIRA---GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp STTTTC------TTSCEEEEEECCCSTT---CHHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred chhccc------ccCCceEEEECCCccc---chhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 987742 4678999999888775 346788999999999999999999988754
No 84
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.69 E-value=5.1e-16 Score=120.14 Aligned_cols=119 Identities=14% Similarity=0.090 Sum_probs=91.1
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (262)
+...++..+...++.+|||+|||+|.++..++.. +..+++|+|+|+.+++.|++++... +...++ ++++|
T Consensus 13 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~~-~~~~d 83 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL--------GVSDRI-AVQQG 83 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--------TCTTSE-EEECC
T ss_pred HHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--------CCCCCE-EEecc
Confidence 3445555666678889999999999999988765 3557999999999999999987642 223357 88888
Q ss_pred ccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
+.+ .+.. ..++||+|++..++++ ..+++++.++|+|||.+++.....+.
T Consensus 84 ~~~-~~~~---~~~~~D~i~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~~ 132 (178)
T 3hm2_A 84 APR-AFDD---VPDNPDVIFIGGGLTA--------PGVFAAAWKRLPVGGRLVANAVTVES 132 (178)
T ss_dssp TTG-GGGG---CCSCCSEEEECC-TTC--------TTHHHHHHHTCCTTCEEEEEECSHHH
T ss_pred hHh-hhhc---cCCCCCEEEECCcccH--------HHHHHHHHHhcCCCCEEEEEeecccc
Confidence 754 2210 2378999999998875 56889999999999999998876543
No 85
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.68 E-value=1.8e-16 Score=127.23 Aligned_cols=117 Identities=20% Similarity=0.309 Sum_probs=89.6
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-ccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 159 (262)
..++.+|||||||+|.++..+++. +...|+|+|+|+.+++.|+++....+ ..++.++++|+.++ +. .
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~---------l~nv~~~~~Da~~~l~~--~ 100 (218)
T 3dxy_A 32 GREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG---------LSNLRVMCHDAVEVLHK--M 100 (218)
T ss_dssp SSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT---------CSSEEEECSCHHHHHHH--H
T ss_pred CCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC---------CCcEEEEECCHHHHHHH--H
Confidence 457789999999999999998864 45579999999999999999876432 23599999998774 20 0
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHH------HHHHHHHHhccCCCcEEEEEeCChHHH
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARA------RRALANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~------~~~l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
.++++||.|++.+...+. ..... ..++.++.++|+|||.+++.+.+....
T Consensus 101 -~~~~~~d~v~~~~~~p~~--~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~ 156 (218)
T 3dxy_A 101 -IPDNSLRMVQLFFPDPWH--KARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYA 156 (218)
T ss_dssp -SCTTCEEEEEEESCCCCC--SGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHH
T ss_pred -cCCCChheEEEeCCCCcc--chhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHH
Confidence 167899999988654432 11111 259999999999999999998876543
No 86
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.68 E-value=4.9e-16 Score=124.27 Aligned_cols=118 Identities=13% Similarity=0.161 Sum_probs=89.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|.++..+++. +...++|+|+|+.+++.|+++....+ ..++.++++|+.+++. .
T Consensus 36 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~---------~~nv~~~~~d~~~l~~--~- 103 (213)
T 2fca_A 36 GNDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE---------AQNVKLLNIDADTLTD--V- 103 (213)
T ss_dssp TSCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC---------CSSEEEECCCGGGHHH--H-
T ss_pred CCCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC---------CCCEEEEeCCHHHHHh--h-
Confidence 356789999999999999998774 45689999999999999999876322 2359999999987541 0
Q ss_pred CCCCCeeEEEEcccccccCCC----HHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 161 ADDAPFDICSCQFAMHYSWST----EARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~----~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
.+++.||.|++.+...+.... .-....+++++.++|+|||.+++.+.+...
T Consensus 104 ~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~ 158 (213)
T 2fca_A 104 FEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGL 158 (213)
T ss_dssp CCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHH
T ss_pred cCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 157889999887654322000 001367899999999999999999877643
No 87
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.67 E-value=4.5e-16 Score=133.06 Aligned_cols=119 Identities=22% Similarity=0.225 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeC
Q 024797 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (262)
Q Consensus 70 ~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (262)
..|.+.+.......++.+|||+|||+|.++..+++.+..+|+|+|+|+ |++.|+++.... +...+++++++
T Consensus 50 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~--------~~~~~i~~~~~ 120 (340)
T 2fyt_A 50 ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLN--------KLEDTITLIKG 120 (340)
T ss_dssp HHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHT--------TCTTTEEEEES
T ss_pred HHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHc--------CCCCcEEEEEe
Confidence 344455555555678889999999999999888876666899999997 999999887632 33457999999
Q ss_pred cccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEE
Q 024797 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (262)
Q Consensus 150 d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li 203 (262)
|+.++++ ++++||+|++......+ ........++.++.++|+|||.++
T Consensus 121 d~~~~~~-----~~~~~D~Ivs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 121 KIEEVHL-----PVEKVDVIISEWMGYFL-LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CTTTSCC-----SCSCEEEEEECCCBTTB-TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred eHHHhcC-----CCCcEEEEEEcCchhhc-cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 9998876 56899999987632111 123567889999999999999987
No 88
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.67 E-value=9.1e-16 Score=127.32 Aligned_cols=125 Identities=14% Similarity=0.038 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHh-ccCCCeEEEecCCC---CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCe
Q 024797 70 NNWIKSVLVQLY-ARRGDVVLDLACGK---GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPA 144 (262)
Q Consensus 70 ~~~~~~~l~~~~-~~~~~~vLDiGcG~---G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v 144 (262)
+.|+..++..+. .....+|||||||+ |.++..+.+. +..+|+++|+|+.|++.|++++.. ..++
T Consensus 62 ~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-----------~~~v 130 (274)
T 2qe6_A 62 RKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-----------DPNT 130 (274)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-----------CTTE
T ss_pred hHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-----------CCCe
Confidence 445555555544 23447999999999 9766555442 456899999999999999998752 2469
Q ss_pred EEEeCcccccccc-------cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 145 RLICGDCYEVHLD-------KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 145 ~~~~~d~~~~~~~-------~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
.++++|+.+.... .. .+..+||+|++..++||+ +.+++..++++++++|+|||+|+++...
T Consensus 131 ~~~~~D~~~~~~~~~~~~~~~~-~d~~~~d~v~~~~vlh~~--~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 131 AVFTADVRDPEYILNHPDVRRM-IDFSRPAAIMLVGMLHYL--SPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp EEEECCTTCHHHHHHSHHHHHH-CCTTSCCEEEETTTGGGS--CTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred EEEEeeCCCchhhhccchhhcc-CCCCCCEEEEEechhhhC--CcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 9999999764210 01 133589999999999998 3335889999999999999999988654
No 89
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.67 E-value=5.6e-16 Score=123.37 Aligned_cols=111 Identities=16% Similarity=0.142 Sum_probs=90.6
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
...++..+...++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++...+ ..++++.++|+.
T Consensus 66 ~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~---------~~~v~~~~~d~~ 135 (210)
T 3lbf_A 66 VARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLD---------LHNVSTRHGDGW 135 (210)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTT---------CCSEEEEESCGG
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcC---------CCceEEEECCcc
Confidence 344455556678899999999999999888776 5689999999999999999886322 125999999997
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+... +.++||+|++..+++|+. ..+.++|+|||++++.+++
T Consensus 136 ~~~~-----~~~~~D~i~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 136 QGWQ-----ARAPFDAIIVTAAPPEIP----------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCG-----GGCCEEEEEESSBCSSCC----------THHHHTEEEEEEEEEEECS
T ss_pred cCCc-----cCCCccEEEEccchhhhh----------HHHHHhcccCcEEEEEEcC
Confidence 7544 467899999999999872 2588999999999999887
No 90
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.67 E-value=1.3e-15 Score=120.81 Aligned_cols=114 Identities=13% Similarity=-0.006 Sum_probs=91.7
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (262)
++..+...++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.|+++.... +. .+++++++|+.+.
T Consensus 32 ~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~-~~v~~~~~d~~~~ 102 (204)
T 3e05_A 32 TLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF--------VA-RNVTLVEAFAPEG 102 (204)
T ss_dssp HHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH--------TC-TTEEEEECCTTTT
T ss_pred HHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh--------CC-CcEEEEeCChhhh
Confidence 4455566788999999999999999887753 568999999999999999987632 11 4589999998654
Q ss_pred ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
.. ..+.||+|++..+++ +...+++++.++|+|||.+++..+..+
T Consensus 103 ~~-----~~~~~D~i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 146 (204)
T 3e05_A 103 LD-----DLPDPDRVFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVTLD 146 (204)
T ss_dssp CT-----TSCCCSEEEESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECBHH
T ss_pred hh-----cCCCCCEEEECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecccc
Confidence 32 347799999988764 357899999999999999999887654
No 91
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.66 E-value=4.9e-16 Score=128.78 Aligned_cols=119 Identities=14% Similarity=0.113 Sum_probs=91.8
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChh------HHHHHHHHhccCccccccccCCCCC
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEG------SIEDCRTRYNGDADHHQRRKKFSFP 143 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~------~~~~a~~~~~~~~~~~~~~~~~~~~ 143 (262)
+...++..+...++.+|||+|||+|.++..+++. +..+|+|+|+|+. +++.|++++... +...+
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~--------~~~~~ 102 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG--------PLGDR 102 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS--------TTGGG
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc--------CCCCc
Confidence 3445566666678899999999999999988764 3368999999997 999999987632 22346
Q ss_pred eEEEeCc---ccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 144 ARLICGD---CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 144 v~~~~~d---~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++++++| ...+++ ++++||+|++..+++|+ .+...+++.+.++++|||.+++...
T Consensus 103 v~~~~~d~~~~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 103 LTVHFNTNLSDDLGPI-----ADQHFDRVVLAHSLWYF----ASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp EEEECSCCTTTCCGGG-----TTCCCSEEEEESCGGGS----SCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred eEEEECChhhhccCCC-----CCCCEEEEEEccchhhC----CCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 9999998 334444 57899999999999998 3344577777777788999998753
No 92
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.66 E-value=1.3e-15 Score=121.70 Aligned_cols=116 Identities=15% Similarity=0.182 Sum_probs=89.5
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--ccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LDK 158 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~ 158 (262)
..++.+|||+|||+|.++..+++. +...++|+|+|+.+++.|+++.... +. .++.++++|+.+++ +
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~--------~~-~~v~~~~~d~~~~~~~~-- 107 (214)
T 1yzh_A 39 GNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV--------GV-PNIKLLWVDGSDLTDYF-- 107 (214)
T ss_dssp TSCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--------CC-SSEEEEECCSSCGGGTS--
T ss_pred CCCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc--------CC-CCEEEEeCCHHHHHhhc--
Confidence 356789999999999999988774 3558999999999999999987632 11 46999999998765 3
Q ss_pred ccCCCCCeeEEEEcccccccCCCHH----HHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEA----RARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~----~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
++++||+|++++...+...... ....++.++.++|+|||.+++.+.+...
T Consensus 108 ---~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 161 (214)
T 1yzh_A 108 ---EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGL 161 (214)
T ss_dssp ---CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHH
T ss_pred ---CCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHH
Confidence 5678999999876543200000 1357999999999999999999876543
No 93
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.66 E-value=3.7e-16 Score=123.87 Aligned_cols=111 Identities=14% Similarity=0.124 Sum_probs=86.5
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCC-CCeEEEeCcccccccccccCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS-FPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~ 162 (262)
++.+|||+|||+|.++..++......|+|+|+|+.|++.|++++...+ .. .+++++++|+.++... .+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--------~~~~~v~~~~~d~~~~~~~---~~ 121 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLK--------CSSEQAEVINQSSLDFLKQ---PQ 121 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTT--------CCTTTEEEECSCHHHHTTS---CC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhC--------CCccceEEEECCHHHHHHh---hc
Confidence 678999999999999988766666689999999999999999886322 11 4699999998765320 02
Q ss_pred CCC-eeEEEEcccccccCCCHHHHHHHHHHH--HhccCCCcEEEEEeCChH
Q 024797 163 DAP-FDICSCQFAMHYSWSTEARARRALANV--SALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 163 ~~~-fD~V~~~~~l~~~~~~~~~~~~~l~~~--~~~L~~gG~li~~~~~~~ 210 (262)
+++ ||+|+++..++ . .....++..+ .++|+|||.+++++....
T Consensus 122 ~~~~fD~I~~~~~~~-~----~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 122 NQPHFDVVFLDPPFH-F----NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SSCCEEEEEECCCSS-S----CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred cCCCCCEEEECCCCC-C----ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 568 99999988754 2 4567788888 678999999999876543
No 94
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.66 E-value=4.5e-16 Score=125.24 Aligned_cols=109 Identities=20% Similarity=0.160 Sum_probs=87.2
Q ss_pred HHhccCCCeEEEecCCCCcchHHHHh--cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc
Q 024797 79 QLYARRGDVVLDLACGKGGDLIKWDK--AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL 156 (262)
Q Consensus 79 ~~~~~~~~~vLDiGcG~G~~~~~l~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 156 (262)
.+.++||.+|||+|||+|.++..+++ .+.++|+|+|+|++|++.++++... ..++..+.+|......
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-----------~~ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-----------RRNIFPILGDARFPEK 140 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-----------CTTEEEEESCTTCGGG
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-----------hcCeeEEEEeccCccc
Confidence 45578999999999999999999887 4678999999999999999988763 2468888888765432
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
. ....+.+|+|++....+ .+...++.++.+.|||||.+++.+
T Consensus 141 ~--~~~~~~vDvVf~d~~~~------~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 141 Y--RHLVEGVDGLYADVAQP------EQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp G--TTTCCCEEEEEECCCCT------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c--ccccceEEEEEEeccCC------hhHHHHHHHHHHhccCCCEEEEEE
Confidence 1 11467899998754332 567889999999999999999875
No 95
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.66 E-value=6.3e-16 Score=132.63 Aligned_cols=121 Identities=17% Similarity=0.211 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEe
Q 024797 69 LNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC 148 (262)
Q Consensus 69 ~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~ 148 (262)
...+.+.++..+...++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|+++.... ++..++++++
T Consensus 35 ~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~--------~l~~~v~~~~ 105 (348)
T 2y1w_A 35 TGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN--------NLTDRIVVIP 105 (348)
T ss_dssp HHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHT--------TCTTTEEEEE
T ss_pred HHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHc--------CCCCcEEEEE
Confidence 3345556666666668899999999999999988777667899999996 889998887632 3345799999
Q ss_pred CcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 149 GDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 149 ~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+|+.+++. +++||+|++...++|+ ..+.....+.++.++|+|||.+++..
T Consensus 106 ~d~~~~~~------~~~~D~Ivs~~~~~~~--~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 106 GKVEEVSL------PEQVDIIISEPMGYML--FNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp SCTTTCCC------SSCEEEEEECCCBTTB--TTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred cchhhCCC------CCceeEEEEeCchhcC--ChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 99988764 3689999999887776 33445677888999999999998653
No 96
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.66 E-value=1e-16 Score=140.79 Aligned_cols=124 Identities=16% Similarity=0.215 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeC
Q 024797 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (262)
Q Consensus 70 ~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (262)
..+...++..+...++.+|||+|||+|.++..+++... +|+|+|+|+.|++.|+++... .....+...
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~-----------~~~~~~~~~ 160 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIR-----------VRTDFFEKA 160 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCC-----------EECSCCSHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCC-----------cceeeechh
Confidence 33445555555556788999999999999998876544 899999999999999876210 000112234
Q ss_pred cccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHH
Q 024797 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIK 214 (262)
Q Consensus 150 d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~ 214 (262)
+...+++ ++++||+|++.++++|+ +++..++++++++|+|||++++.+++...+..
T Consensus 161 ~~~~l~~-----~~~~fD~I~~~~vl~h~----~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~ 216 (416)
T 4e2x_A 161 TADDVRR-----TEGPANVIYAANTLCHI----PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVA 216 (416)
T ss_dssp HHHHHHH-----HHCCEEEEEEESCGGGC----TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHH
T ss_pred hHhhccc-----CCCCEEEEEECChHHhc----CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhh
Confidence 4444444 46899999999999999 57899999999999999999999998765443
No 97
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.65 E-value=4.5e-16 Score=133.60 Aligned_cols=117 Identities=21% Similarity=0.175 Sum_probs=91.2
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
.+.++......++.+|||+|||+|.++..+++.+..+|+|+|+|+ |++.|+++.... +...+++++++|+.
T Consensus 55 ~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~--------~~~~~v~~~~~d~~ 125 (349)
T 3q7e_A 55 RNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKAN--------KLDHVVTIIKGKVE 125 (349)
T ss_dssp HHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHT--------TCTTTEEEEESCTT
T ss_pred HHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHc--------CCCCcEEEEECcHH
Confidence 333433334467899999999999999988877667899999995 999999987632 33456999999999
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
++++ ++++||+|++....+++ ........++.++.++|+|||.++.
T Consensus 126 ~~~~-----~~~~fD~Iis~~~~~~l-~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 126 EVEL-----PVEKVDIIISEWMGYCL-FYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TCCC-----SSSCEEEEEECCCBBTB-TBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred HccC-----CCCceEEEEEccccccc-cCchhHHHHHHHHHHhCCCCCEEcc
Confidence 9876 67899999997643332 1235578899999999999999874
No 98
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.65 E-value=6.4e-16 Score=119.72 Aligned_cols=110 Identities=15% Similarity=0.049 Sum_probs=86.5
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-ccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~ 161 (262)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|++++... +...++.++++|+.+. +.
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~~~~~~~d~~~~~~~----- 96 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMT--------KAENRFTLLKMEAERAIDC----- 96 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTT--------TCGGGEEEECSCHHHHHHH-----
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCceEEEECcHHHhHHh-----
Confidence 467899999999999999887765568999999999999999988632 2234589999998773 22
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHH--hccCCCcEEEEEeCChH
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVS--ALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~--~~L~~gG~li~~~~~~~ 210 (262)
.++.||+|+++..++. .....++..+. ++|+|||.+++.++...
T Consensus 97 ~~~~fD~i~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 97 LTGRFDLVFLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp BCSCEEEEEECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred hcCCCCEEEECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 2467999999876532 34566777776 99999999999887653
No 99
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.65 E-value=2.9e-16 Score=126.31 Aligned_cols=102 Identities=15% Similarity=0.279 Sum_probs=86.8
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc--ccccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE--VHLDKVL 160 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~ 160 (262)
.++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.++++. ..+.++|+.+ .++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~----------------~~~~~~d~~~~~~~~---- 89 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL----------------DHVVLGDIETMDMPY---- 89 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS----------------SEEEESCTTTCCCCS----
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC----------------CcEEEcchhhcCCCC----
Confidence 57789999999999999988776 468999999999999998754 3578888876 333
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
++++||+|++..+++|+ .++..++.++.++|+|||.+++++++..
T Consensus 90 -~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 90 -EEEQFDCVIFGDVLEHL----FDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp -CTTCEEEEEEESCGGGS----SCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred -CCCccCEEEECChhhhc----CCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 56899999999999998 4567999999999999999999998754
No 100
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.64 E-value=9.2e-16 Score=131.86 Aligned_cols=129 Identities=12% Similarity=0.092 Sum_probs=94.4
Q ss_pred hHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHh-cCCCeEEEEeCChhHHHHHHHHhccCccccccccCC-CCCeE
Q 024797 68 KLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDK-AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPAR 145 (262)
Q Consensus 68 ~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~ 145 (262)
.....+..++..+...++.+|||+|||+|..+..++. .+..+++|||+|+.+++.|++...... .+....+. ..+++
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~fr-kr~~~~Gl~~~rVe 235 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFR-KWMKWYGKKHAEYT 235 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHH-HHHHHHTBCCCEEE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHH-HHHHHhCCCCCCeE
Confidence 3344566677777778999999999999999988875 355569999999999999987542100 00000111 24699
Q ss_pred EEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 146 LICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 146 ~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
++++|+.++++... -..||+|+++..++ . ++....|.++.++|||||+|++.
T Consensus 236 fi~GD~~~lp~~d~---~~~aDVVf~Nn~~F-~----pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 236 LERGDFLSEEWRER---IANTSVIFVNNFAF-G----PEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp EEECCTTSHHHHHH---HHTCSEEEECCTTC-C----HHHHHHHHHHHTTSCTTCEEEES
T ss_pred EEECcccCCccccc---cCCccEEEEccccc-C----chHHHHHHHHHHcCCCCcEEEEe
Confidence 99999998876211 14799999987653 2 67788889999999999999975
No 101
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.64 E-value=6.6e-16 Score=133.83 Aligned_cols=121 Identities=15% Similarity=0.226 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEe
Q 024797 69 LNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC 148 (262)
Q Consensus 69 ~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~ 148 (262)
...|...++......++.+|||+|||+|.++..+++.+..+|+|+|+| .|++.|+++.... +...++++++
T Consensus 48 ~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~--------~~~~~v~~~~ 118 (376)
T 3r0q_C 48 MDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKAN--------NLDHIVEVIE 118 (376)
T ss_dssp HHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHT--------TCTTTEEEEE
T ss_pred HHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHc--------CCCCeEEEEE
Confidence 334444454444556789999999999999998887766689999999 9999999987632 3345699999
Q ss_pred CcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 149 GDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 149 ~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
+|+.++++ + ++||+|++....+++ .....+..++.++.++|+|||.+++.
T Consensus 119 ~d~~~~~~-----~-~~~D~Iv~~~~~~~l-~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 119 GSVEDISL-----P-EKVDVIISEWMGYFL-LRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp SCGGGCCC-----S-SCEEEEEECCCBTTB-TTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred CchhhcCc-----C-CcceEEEEcChhhcc-cchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 99998875 3 889999996644433 33345788999999999999999764
No 102
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.64 E-value=9e-16 Score=126.88 Aligned_cols=116 Identities=19% Similarity=0.205 Sum_probs=84.8
Q ss_pred CCCeEEEecCCCCc----chHHHHhc-C----CCeEEEEeCChhHHHHHHHHhccCcc----c------cc---c-----
Q 024797 84 RGDVVLDLACGKGG----DLIKWDKA-K----IGYYVGIDIAEGSIEDCRTRYNGDAD----H------HQ---R----- 136 (262)
Q Consensus 84 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~~v~gvD~s~~~~~~a~~~~~~~~~----~------~~---~----- 136 (262)
++.+|||+|||+|. ++..+++. + ..+|+|+|+|+.|++.|++..-.... . .. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 33334332 2 23799999999999999987521000 0 00 0
Q ss_pred ----ccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 137 ----RKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 137 ----~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
...+..+|.|.++|+.+.++. ..++||+|+|.++++|+ +.+...+++.+++++|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~----~~~~fDlI~crnvliyf--~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN----VPGPFDAIFCRNVMIYF--DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC----CCCCEEEEEECSSGGGS--CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCC----cCCCeeEEEECCchHhC--CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 000113699999999875441 25789999999999998 7778899999999999999999984
No 103
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.64 E-value=2.7e-15 Score=121.12 Aligned_cols=116 Identities=18% Similarity=0.174 Sum_probs=88.2
Q ss_pred HhccCCCeEEEecCC-CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 80 LYARRGDVVLDLACG-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
....++.+|||+||| +|.++..+++....+|+|+|+|+.+++.|++++... +.+++++++|+..+..
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~----------~~~v~~~~~d~~~~~~-- 118 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERN----------NSNVRLVKSNGGIIKG-- 118 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHT----------TCCCEEEECSSCSSTT--
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHh----------CCCcEEEeCCchhhhh--
Confidence 345688999999999 999999887653568999999999999999987632 2268999999754321
Q ss_pred ccCCCCCeeEEEEcccccccCC---------------CHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 159 VLADDAPFDICSCQFAMHYSWS---------------TEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~---------------~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
.++++||+|+++..+++... .......+++++.++|+|||.+++.++..
T Consensus 119 --~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 182 (230)
T 3evz_A 119 --VVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK 182 (230)
T ss_dssp --TCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC
T ss_pred --cccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 14588999999866554310 11234789999999999999999987754
No 104
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.63 E-value=4.3e-15 Score=116.01 Aligned_cols=116 Identities=21% Similarity=0.230 Sum_probs=91.4
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
++..+...++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.+++++... +...++.+.++|+.+ .
T Consensus 25 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~--------~~~~~~~~~~~d~~~-~ 94 (192)
T 1l3i_A 25 IMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRH--------GLGDNVTLMEGDAPE-A 94 (192)
T ss_dssp HHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHT--------TCCTTEEEEESCHHH-H
T ss_pred HHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHc--------CCCcceEEEecCHHH-h
Confidence 3444456788899999999999998887655 78999999999999999987632 222468999999876 2
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHH
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
+. ..+.||+|++..++++ ...+++++.++|+|||.+++..++....
T Consensus 95 ~~----~~~~~D~v~~~~~~~~-------~~~~l~~~~~~l~~gG~l~~~~~~~~~~ 140 (192)
T 1l3i_A 95 LC----KIPDIDIAVVGGSGGE-------LQEILRIIKDKLKPGGRIIVTAILLETK 140 (192)
T ss_dssp HT----TSCCEEEEEESCCTTC-------HHHHHHHHHHTEEEEEEEEEEECBHHHH
T ss_pred cc----cCCCCCEEEECCchHH-------HHHHHHHHHHhcCCCcEEEEEecCcchH
Confidence 31 2268999999887754 3778999999999999999998876543
No 105
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.63 E-value=1.9e-15 Score=128.63 Aligned_cols=119 Identities=21% Similarity=0.245 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeC
Q 024797 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (262)
Q Consensus 70 ~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (262)
..|.+.++......++.+|||+|||+|.++..+++.+..+|+|+|+| .|++.|+++.... +...+++++++
T Consensus 24 ~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~--------~~~~~i~~~~~ 94 (328)
T 1g6q_1 24 LSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELN--------GFSDKITLLRG 94 (328)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHT--------TCTTTEEEEES
T ss_pred HHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHc--------CCCCCEEEEEC
Confidence 34444454455556788999999999999988877666689999999 5999999887632 33456999999
Q ss_pred cccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEE
Q 024797 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (262)
Q Consensus 150 d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li 203 (262)
|+.++++ ++++||+|++....+++ .....+..++.++.++|+|||.++
T Consensus 95 d~~~~~~-----~~~~~D~Ivs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 95 KLEDVHL-----PFPKVDIIISEWMGYFL-LYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CTTTSCC-----SSSCEEEEEECCCBTTB-STTCCHHHHHHHHHHHEEEEEEEE
T ss_pred chhhccC-----CCCcccEEEEeCchhhc-ccHHHHHHHHHHHHhhcCCCeEEE
Confidence 9988775 56889999987543332 123456789999999999999987
No 106
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.63 E-value=1.3e-15 Score=120.87 Aligned_cols=103 Identities=16% Similarity=0.101 Sum_probs=85.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..+++.+..+++|+|+|+.+++.|+++....+. .++.+.++|+.+.
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---------~~v~~~~~d~~~~------- 121 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGI---------YDIALQKTSLLAD------- 121 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC---------CCCEEEESSTTTT-------
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC---------CceEEEecccccc-------
Confidence 457889999999999999988776666899999999999999998763221 2389999998764
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.+++||+|+++..+++ ...+++++.++|+|||.+++...
T Consensus 122 ~~~~fD~i~~~~~~~~-------~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 122 VDGKFDLIVANILAEI-------LLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp CCSCEEEEEEESCHHH-------HHHHGGGSGGGEEEEEEEEEEEE
T ss_pred CCCCceEEEECCcHHH-------HHHHHHHHHHhcCCCCEEEEEec
Confidence 3578999999876653 47889999999999999998743
No 107
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.63 E-value=2.8e-15 Score=121.63 Aligned_cols=123 Identities=15% Similarity=0.115 Sum_probs=86.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc-cc--cc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VH--LD 157 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~--~~ 157 (262)
..++.+|||||||+|.++..+++. +...|+|+|+|+.|++.|++++...... ......++.++++|+.. ++ +
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~---~~~~~~nv~~~~~d~~~~l~~~~- 119 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAA---PAGGFQNIACLRSNAMKHLPNFF- 119 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHS---TTCCCTTEEEEECCTTTCHHHHC-
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHH---HhcCCCeEEEEECcHHHhhhhhC-
Confidence 356779999999999999998764 4557999999999999998775421000 00113469999999976 44 3
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHH----HHHHHHHHHhccCCCcEEEEEeCChHHH
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEAR----ARRALANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~----~~~~l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
++++||.|++.+...+....... ...+++++.++|+|||.|++.+.+....
T Consensus 120 ----~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~ 174 (235)
T 3ckk_A 120 ----YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELH 174 (235)
T ss_dssp ----CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHH
T ss_pred ----CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHH
Confidence 57899999876544332000000 1479999999999999999998876543
No 108
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.63 E-value=1.6e-15 Score=120.19 Aligned_cols=107 Identities=9% Similarity=-0.008 Sum_probs=83.9
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-ccccccCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKVLAD 162 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~ 162 (262)
++.+|||+|||+|.++..++.....+|+|+|+|+.|++.|++++...+ . .+++++++|+.+. +. .
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~--------~-~~v~~~~~D~~~~~~~-----~ 119 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLK--------A-GNARVVNSNAMSFLAQ-----K 119 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTT--------C-CSEEEECSCHHHHHSS-----C
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcC--------C-CcEEEEECCHHHHHhh-----c
Confidence 678999999999999988766665689999999999999999886321 1 4699999998763 32 4
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHh--ccCCCcEEEEEeCCh
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSA--LLRPGGTFIGTMPDA 209 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~--~L~~gG~li~~~~~~ 209 (262)
.++||+|++...++ . .....+++.+.+ +|+|||.+++++...
T Consensus 120 ~~~fD~V~~~~p~~-~----~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 120 GTPHNIVFVDPPFR-R----GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp CCCEEEEEECCSSS-T----TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CCCCCEEEECCCCC-C----CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 57899999987744 2 334567777755 599999999987654
No 109
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.63 E-value=6.1e-15 Score=127.22 Aligned_cols=109 Identities=13% Similarity=0.031 Sum_probs=90.8
Q ss_pred hccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc--ccc
Q 024797 81 YARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV--HLD 157 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~ 157 (262)
......+|||||||+|.++..+++. +..+++++|+ +.+++.|++++... +...+++++.+|+.+. ++
T Consensus 176 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~~~- 245 (363)
T 3dp7_A 176 FSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL--------SGSERIHGHGANLLDRDVPF- 245 (363)
T ss_dssp GGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC--------TTGGGEEEEECCCCSSSCCC-
T ss_pred cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc--------CcccceEEEEccccccCCCC-
Confidence 3356789999999999999988764 4558999999 99999999987632 2235699999999875 34
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+ +.||+|++..++|++ +.++...++++++++|+|||.+++..
T Consensus 246 ----p-~~~D~v~~~~vlh~~--~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 246 ----P-TGFDAVWMSQFLDCF--SEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp ----C-CCCSEEEEESCSTTS--CHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ----C-CCcCEEEEechhhhC--CHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 3 689999999999988 67778899999999999999998864
No 110
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.62 E-value=2.1e-15 Score=120.26 Aligned_cols=107 Identities=13% Similarity=0.057 Sum_probs=78.5
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|..+..+++. +.+.|+|+|+|+.|++.+.+.... ..++.++++|+........
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-----------~~~v~~~~~d~~~~~~~~~- 122 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-----------RNNIIPLLFDASKPWKYSG- 122 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-----------CSSEEEECSCTTCGGGTTT-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-----------CCCeEEEEcCCCCchhhcc-
Confidence 467889999999999988887763 346899999999988766554432 1258888899876411000
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
..++||+|+++.. + ......++++++++|||||.+++.++
T Consensus 123 -~~~~fD~V~~~~~-~-----~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 123 -IVEKVDLIYQDIA-Q-----KNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp -TCCCEEEEEECCC-S-----TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -cccceeEEEEecc-C-----hhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 2378999998732 1 13455679999999999999999863
No 111
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.62 E-value=1.2e-15 Score=119.03 Aligned_cols=114 Identities=14% Similarity=0.089 Sum_probs=85.2
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|++++... +...+++++++|+.+.... ...+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~~~~~~~d~~~~~~~-~~~~ 113 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAIT--------KEPEKFEVRKMDANRALEQ-FYEE 113 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH--------TCGGGEEEEESCHHHHHHH-HHHT
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHh--------CCCcceEEEECcHHHHHHH-HHhc
Confidence 467899999999999999887766668999999999999999987632 2234689999998764210 0002
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHH--HhccCCCcEEEEEeCChH
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANV--SALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~--~~~L~~gG~li~~~~~~~ 210 (262)
+++||+|+++..++.. . ....+..+ .++|+|||.+++.++...
T Consensus 114 ~~~fD~i~~~~~~~~~--~---~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 114 KLQFDLVLLDPPYAKQ--E---IVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp TCCEEEEEECCCGGGC--C---HHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCCCEEEECCCCCch--h---HHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 5789999998775422 2 34455555 889999999999887653
No 112
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.62 E-value=4.8e-15 Score=119.68 Aligned_cols=110 Identities=18% Similarity=0.128 Sum_probs=88.9
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
...++..+...++.+|||+|||+|.++..++... .+|+|+|+|+.+++.++++.... . ++.++++|+.
T Consensus 59 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~----------~-~v~~~~~d~~ 126 (231)
T 1vbf_A 59 GIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYY----------N-NIKLILGDGT 126 (231)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTC----------S-SEEEEESCGG
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhc----------C-CeEEEECCcc
Confidence 3445555556788899999999999999887655 68999999999999999987631 2 6899999987
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
.... .+++||+|++..+++|+ . .++.++|+|||.+++.+++.
T Consensus 127 ~~~~-----~~~~fD~v~~~~~~~~~--~--------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 127 LGYE-----EEKPYDRVVVWATAPTL--L--------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GCCG-----GGCCEEEEEESSBBSSC--C--------HHHHHTEEEEEEEEEEECSS
T ss_pred cccc-----cCCCccEEEECCcHHHH--H--------HHHHHHcCCCcEEEEEEcCC
Confidence 6321 35789999999999987 2 35889999999999988754
No 113
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.62 E-value=8.5e-16 Score=118.58 Aligned_cols=102 Identities=12% Similarity=0.061 Sum_probs=81.6
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|.++..++.. +..+|+++|+|+.|++.+++++...+. ..++.+ +|.....
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~--------~~~v~~--~d~~~~~------ 111 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT--------TIKYRF--LNKESDV------ 111 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC--------SSEEEE--ECCHHHH------
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC--------CccEEE--ecccccC------
Confidence 56789999999999998888653 344899999999999999999874332 223444 5554432
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
+.++||+|++..++|++ ++.+..+.++.+.|+|||.+|-
T Consensus 112 ~~~~~DvVLa~k~LHlL----~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 112 YKGTYDVVFLLKMLPVL----KQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp TTSEEEEEEEETCHHHH----HHTTCCHHHHHHTCEEEEEEEE
T ss_pred CCCCcChhhHhhHHHhh----hhhHHHHHHHHHHhCCCCEEEE
Confidence 57889999999999998 7788888899999999997664
No 114
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.62 E-value=6.7e-15 Score=114.11 Aligned_cols=111 Identities=18% Similarity=0.250 Sum_probs=88.9
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
++..+...++.+|||+|||+|.++..++. ...+++|+|+|+.+++.++++....+ ..++.++++|+.+ +
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~---------~~~~~~~~~d~~~-~ 95 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFN---------IKNCQIIKGRAED-V 95 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTT---------CCSEEEEESCHHH-H
T ss_pred HHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcC---------CCcEEEEECCccc-c
Confidence 44444556788999999999999998877 66689999999999999999876322 1358999999877 4
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHH
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
+ ++++||+|++..+ + +...+++++.++ |||.+++..++.+.+
T Consensus 96 ~-----~~~~~D~i~~~~~-~-------~~~~~l~~~~~~--~gG~l~~~~~~~~~~ 137 (183)
T 2yxd_A 96 L-----DKLEFNKAFIGGT-K-------NIEKIIEILDKK--KINHIVANTIVLENA 137 (183)
T ss_dssp G-----GGCCCSEEEECSC-S-------CHHHHHHHHHHT--TCCEEEEEESCHHHH
T ss_pred c-----cCCCCcEEEECCc-c-------cHHHHHHHHhhC--CCCEEEEEecccccH
Confidence 4 4578999999887 2 246788888888 999999999887654
No 115
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.62 E-value=7.3e-15 Score=127.16 Aligned_cols=111 Identities=24% Similarity=0.293 Sum_probs=91.2
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|++++... ...++++++|+.+... +
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g-~~V~gvDis~~al~~A~~n~~~~----------~~~v~~~~~D~~~~~~-----~ 295 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMG-AEVVGVEDDLASVLSLQKGLEAN----------ALKAQALHSDVDEALT-----E 295 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTT-CEEEEEESBHHHHHHHHHHHHHT----------TCCCEEEECSTTTTSC-----T
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHc----------CCCeEEEEcchhhccc-----c
Confidence 367899999999999999988764 48999999999999999987632 2248899999988764 4
Q ss_pred CCCeeEEEEcccccccC-CCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 163 DAPFDICSCQFAMHYSW-STEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~-~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
+++||+|+++..+++.. ........++.++.++|+|||.+++.+...
T Consensus 296 ~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 296 EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 58999999998888621 023778899999999999999999987543
No 116
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.62 E-value=3.5e-15 Score=122.78 Aligned_cols=114 Identities=16% Similarity=0.157 Sum_probs=87.6
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
++.+|||+|||+|.++..++......|+|+|+++.+++.|++++.. .++..++.++++|+.++... .+.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~--------~~~~~~v~~~~~D~~~~~~~---~~~ 117 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAY--------NQLEDQIEIIEYDLKKITDL---IPK 117 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHH--------TTCTTTEEEECSCGGGGGGT---SCT
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHH--------CCCcccEEEEECcHHHhhhh---hcc
Confidence 6889999999999999988776555899999999999999998873 23345699999999876521 146
Q ss_pred CCeeEEEEccccccc----C------------CCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 164 APFDICSCQFAMHYS----W------------STEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~----~------------~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++||+|+++..+... . ........++..+.++|+|||.+++..+.
T Consensus 118 ~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 118 ERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp TCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 899999997544221 0 01245678999999999999999987753
No 117
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.62 E-value=6.6e-15 Score=125.48 Aligned_cols=116 Identities=17% Similarity=0.122 Sum_probs=93.4
Q ss_pred HHHHHHhc--cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc
Q 024797 75 SVLVQLYA--RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 75 ~~l~~~~~--~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (262)
.++..+.. .++.+|||+|||+|..+..+++. +..+++++|+| .+++.|+++.... +...++++.++|+
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~--------~~~~~v~~~~~d~ 224 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ--------GVASRYHTIAGSA 224 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH--------TCGGGEEEEESCT
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc--------CCCcceEEEeccc
Confidence 34444444 67789999999999999888764 34589999999 9999999987532 2234699999999
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.+.++ + ..||+|++.++++|+ +.++...+++++.++|+|||++++..+
T Consensus 225 ~~~~~-----~-~~~D~v~~~~~l~~~--~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 225 FEVDY-----G-NDYDLVLLPNFLHHF--DVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp TTSCC-----C-SCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCC-----C-CCCcEEEEcchhccC--CHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 87654 3 349999999999998 777789999999999999999887653
No 118
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.61 E-value=5.2e-15 Score=122.24 Aligned_cols=100 Identities=20% Similarity=0.370 Sum_probs=84.1
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|.++..+++. +...|+|+|+|+.+++.|+++.. ++.+.++|+.++++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~----- 144 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP--------------QVTFCVASSHRLPF----- 144 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT--------------TSEEEECCTTSCSB-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC--------------CcEEEEcchhhCCC-----
Confidence 57889999999999999988775 34589999999999999998753 37899999988776
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHH
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
++++||+|++.++.. ++.++.++|+|||.+++.+++...+
T Consensus 145 ~~~~fD~v~~~~~~~-----------~l~~~~~~L~pgG~l~~~~~~~~~~ 184 (269)
T 1p91_A 145 SDTSMDAIIRIYAPC-----------KAEELARVVKPGGWVITATPGPRHL 184 (269)
T ss_dssp CTTCEEEEEEESCCC-----------CHHHHHHHEEEEEEEEEEEECTTTT
T ss_pred CCCceeEEEEeCChh-----------hHHHHHHhcCCCcEEEEEEcCHHHH
Confidence 678999999876543 4688999999999999999876543
No 119
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.61 E-value=1e-16 Score=130.46 Aligned_cols=104 Identities=22% Similarity=0.247 Sum_probs=85.5
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..++... ..|+|+|+|+.|++.|++++...+ ...++.++++|+.+++ +
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~--------~~~~~~~~~~d~~~~~------~ 141 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYG--------IADKIEFICGDFLLLA------S 141 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT--------CGGGEEEEESCHHHHG------G
T ss_pred cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcC--------CCcCeEEEECChHHhc------c
Confidence 378899999999999999988754 689999999999999999886432 2246999999998875 3
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
+++||+|+++..+++. .+....+.++.++|+|||.+++.
T Consensus 142 ~~~~D~v~~~~~~~~~----~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 142 FLKADVVFLSPPWGGP----DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp GCCCSEEEECCCCSSG----GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred cCCCCEEEECCCcCCc----chhhhHHHHHHhhcCCcceeHHH
Confidence 5789999999988876 44445777899999999997653
No 120
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.61 E-value=2.2e-15 Score=122.59 Aligned_cols=105 Identities=12% Similarity=0.040 Sum_probs=82.9
Q ss_pred cCCCeEEEecCCCCcchHHHHh-cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDK-AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|..+..++. .+..+|+|+|+|+.|++.|+++....+ ..+++++++|+.+++... .
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---------~~~v~~~~~d~~~~~~~~--~ 137 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ---------LENTTFCHDRAETFGQRK--D 137 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT---------CSSEEEEESCHHHHTTCT--T
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---------CCCEEEEeccHHHhcccc--c
Confidence 4678999999999999888875 345689999999999999999876321 125999999998765310 0
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
.+++||+|++..+ .+...+++.+.++|+|||.+++..
T Consensus 138 ~~~~fD~V~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 138 VRESYDIVTARAV--------ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp TTTCEEEEEEECC--------SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ccCCccEEEEecc--------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1578999998762 236789999999999999998865
No 121
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.60 E-value=7.8e-15 Score=125.94 Aligned_cols=116 Identities=17% Similarity=0.210 Sum_probs=93.0
Q ss_pred HHHHHhccC-CCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc
Q 024797 76 VLVQLYARR-GDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (262)
Q Consensus 76 ~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (262)
++..+...+ +.+|||+|||+|.++..+++. +..+++++|+ +.+++.++++.... +...+++++.+|+.+
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~ 240 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--------DLGGRVEFFEKNLLD 240 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--------TCGGGEEEEECCTTC
T ss_pred HHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc--------CCCCceEEEeCCccc
Confidence 444444445 789999999999999988774 4558999999 88999999887632 233469999999987
Q ss_pred cccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 154 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
.+.. .++.||+|++..++||+ +.++...++++++++|+|||++++..
T Consensus 241 ~~~~----~~~~~D~v~~~~vlh~~--~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 241 ARNF----EGGAADVVMLNDCLHYF--DAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp GGGG----TTCCEEEEEEESCGGGS--CHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Cccc----CCCCccEEEEecccccC--CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 6510 24569999999999998 77778999999999999999998864
No 122
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=6.4e-15 Score=117.62 Aligned_cols=112 Identities=18% Similarity=0.069 Sum_probs=87.8
Q ss_pred HHHHHHHhccCCCeEEEecCCCCcchHHHHhcC--CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc
Q 024797 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 74 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (262)
..++..+...++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+++++...+ ..++.+.++|+
T Consensus 67 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---------~~~v~~~~~d~ 137 (215)
T 2yxe_A 67 GMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG---------YDNVIVIVGDG 137 (215)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT---------CTTEEEEESCG
T ss_pred HHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---------CCCeEEEECCc
Confidence 344555556788899999999999998887643 2689999999999999999876321 13488999998
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
..... ..++||+|++..+++|+ . .++.++|+|||.+++.+++.
T Consensus 138 ~~~~~-----~~~~fD~v~~~~~~~~~--~--------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 138 TLGYE-----PLAPYDRIYTTAAGPKI--P--------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp GGCCG-----GGCCEEEEEESSBBSSC--C--------HHHHHTEEEEEEEEEEESSS
T ss_pred ccCCC-----CCCCeeEEEECCchHHH--H--------HHHHHHcCCCcEEEEEECCC
Confidence 54221 25789999999999987 2 37899999999999988765
No 123
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.59 E-value=3.2e-14 Score=112.85 Aligned_cols=101 Identities=14% Similarity=0.079 Sum_probs=82.0
Q ss_pred CCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.++++....+ ..++.+.++|+.+.+ +
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---------~~~v~~~~~d~~~~~------~ 129 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK---------LENIEPVQSRVEEFP------S 129 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---------CSSEEEEECCTTTSC------C
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC---------CCCeEEEecchhhCC------c
Confidence 4789999999999999988764 45689999999999999999876322 123899999998764 3
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.++||+|++... + +...++..+.++|+|||.+++...
T Consensus 130 ~~~~D~i~~~~~-~-------~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 130 EPPFDGVISRAF-A-------SLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CSCEEEEECSCS-S-------SHHHHHHHHTTSEEEEEEEEEEES
T ss_pred cCCcCEEEEecc-C-------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 578999997542 2 256899999999999999998764
No 124
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.59 E-value=9.2e-15 Score=126.50 Aligned_cols=114 Identities=19% Similarity=0.202 Sum_probs=90.9
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (262)
++..+...++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|+++.... +...+++++++|+.+
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~- 243 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA--------GLADRVTVAEGDFFK- 243 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--------TCTTTEEEEECCTTS-
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc--------CCCCceEEEeCCCCC-
Confidence 343334456789999999999999988764 3458999999 99999999987632 234469999999875
Q ss_pred ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++ + ..||+|++.+++||+ +.+....+++++.++|+|||++++...
T Consensus 244 ~~-----~-~~~D~v~~~~vl~~~--~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 244 PL-----P-VTADVVLLSFVLLNW--SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CC-----S-CCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cC-----C-CCCCEEEEeccccCC--CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 33 2 249999999999988 666667999999999999999887654
No 125
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.59 E-value=2.2e-14 Score=124.04 Aligned_cols=107 Identities=14% Similarity=0.181 Sum_probs=89.1
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++... +...++++..+|+. .++
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------~l~~~v~~~~~d~~-~~~---- 265 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR--------GLADRCEILPGDFF-ETI---- 265 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--------TCTTTEEEEECCTT-TCC----
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc--------CcCCceEEeccCCC-CCC----
Confidence 356789999999999999988774 4458999999 99999999987632 33457999999987 343
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+. .||+|++.+++|++ +.+...+++++++++|+|||++++..
T Consensus 266 -p~-~~D~v~~~~vlh~~--~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 266 -PD-GADVYLIKHVLHDW--DDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp -CS-SCSEEEEESCGGGS--CHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred -CC-CceEEEhhhhhccC--CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 33 89999999999988 66677799999999999999998864
No 126
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.59 E-value=4.8e-15 Score=128.18 Aligned_cols=124 Identities=13% Similarity=0.155 Sum_probs=91.4
Q ss_pred HHHHHHHhccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 74 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
+.++..+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++...+... ..++.+.++|+.
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~------~~~v~~~~~D~~ 285 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA------LDRCEFMINNAL 285 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGG------GGGEEEEECSTT
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCc------CceEEEEechhh
Confidence 334555555566899999999999999988753 5689999999999999999886432211 124888999987
Q ss_pred ccccccccCCCCCeeEEEEcccccccCC-CHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWS-TEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~-~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
+. + ++++||+|+++..+++... .......+++++.++|+|||.+++.....
T Consensus 286 ~~-~-----~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 286 SG-V-----EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp TT-C-----CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred cc-C-----CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 73 3 5689999999988875310 11234578999999999999999977543
No 127
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.59 E-value=7.3e-15 Score=125.19 Aligned_cols=106 Identities=18% Similarity=0.149 Sum_probs=88.5
Q ss_pred CCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
+..+|||+|||+|..+..+++. +..+++++|+ +.+++.|++++... +...++++..+|+. .++ +
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~-~~~-----p 233 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT--------GLSGRAQVVVGSFF-DPL-----P 233 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--------TCTTTEEEEECCTT-SCC-----C
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc--------CcCcCeEEecCCCC-CCC-----C
Confidence 4679999999999999888764 4557999999 99999999987632 23457999999987 343 3
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
. .||+|++.+++||+ +.++..+++++++++|+|||++++...
T Consensus 234 ~-~~D~v~~~~vlh~~--~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 234 A-GAGGYVLSAVLHDW--DDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp C-SCSEEEEESCGGGS--CHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred C-CCcEEEEehhhccC--CHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 3 89999999999998 666789999999999999999988653
No 128
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.59 E-value=4.1e-15 Score=132.38 Aligned_cols=116 Identities=17% Similarity=0.202 Sum_probs=90.9
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
...++..+...++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|++++... ++..+++++++|+.
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~--------gl~~~v~~~~~d~~ 217 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN--------NLTDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHT--------TCTTTEEEEESCTT
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHc--------CCCCcEEEEECchh
Confidence 444555554557889999999999999888776666899999998 999999887632 33457999999998
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
++++ +++||+|++...++|. ..+.....+.++.++|+|||.+++.
T Consensus 218 ~~~~------~~~fD~Ivs~~~~~~~--~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 218 EVSL------PEQVDIIISEPMGYML--FNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp TCCC------SSCEEEEECCCCHHHH--TCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hCcc------CCCeEEEEEeCchHhc--CcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8764 3689999998776655 3345666778899999999999854
No 129
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.59 E-value=1.3e-15 Score=122.81 Aligned_cols=107 Identities=17% Similarity=0.268 Sum_probs=82.8
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc-ccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC-YEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~ 160 (262)
..++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.++++.. +++++++|+ ..+++
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~~---- 106 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARANAP--------------HADVYEWNGKGELPA---- 106 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCT--------------TSEEEECCSCSSCCT----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCC--------------CceEEEcchhhccCC----
Confidence 367889999999999999888766 4489999999999999998733 489999999 45554
Q ss_pred CC-CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC--ChHHHHHHHhh
Q 024797 161 AD-DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP--DANVIIKKLRE 218 (262)
Q Consensus 161 ~~-~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~--~~~~~~~~~~~ 218 (262)
+ +++||+|++.. ++..+++++.++|+|||.++.... +...+...+..
T Consensus 107 -~~~~~fD~v~~~~----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~ 156 (226)
T 3m33_A 107 -GLGAPFGLIVSRR----------GPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAA 156 (226)
T ss_dssp -TCCCCEEEEEEES----------CCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHH
T ss_pred -cCCCCEEEEEeCC----------CHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHH
Confidence 5 78999999872 235678899999999999983321 33444444443
No 130
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.58 E-value=2.5e-14 Score=123.14 Aligned_cols=113 Identities=14% Similarity=0.049 Sum_probs=91.5
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (262)
++..+...++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++... +...+++++++|+.+.
T Consensus 182 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~ 252 (359)
T 1x19_A 182 LLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK--------GVADRMRGIAVDIYKE 252 (359)
T ss_dssp HHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--------TCTTTEEEEECCTTTS
T ss_pred HHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc--------CCCCCEEEEeCccccC
Confidence 444444457789999999999999988774 3458999999 99999999987632 2344699999999877
Q ss_pred ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
++ ++ +|+|++..++|++ +.++...+++++.++|+|||.+++..
T Consensus 253 ~~-----~~--~D~v~~~~vlh~~--~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 253 SY-----PE--ADAVLFCRILYSA--NEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp CC-----CC--CSEEEEESCGGGS--CHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CC-----CC--CCEEEEechhccC--CHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 54 32 3999999999988 66678999999999999999997764
No 131
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.58 E-value=1.9e-14 Score=117.74 Aligned_cols=106 Identities=13% Similarity=0.010 Sum_probs=83.2
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.|+++....+. .+++++++|+.+++....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l---------~~v~~~~~d~~~~~~~~~-- 147 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL---------KGARALWGRAEVLAREAG-- 147 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---------SSEEEEECCHHHHTTSTT--
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC---------CceEEEECcHHHhhcccc--
Confidence 35789999999999998888764 566899999999999999998764322 249999999987753100
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
..++||+|++..+. +...++..+.++|+|||++++...
T Consensus 148 ~~~~fD~I~s~a~~--------~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 148 HREAYARAVARAVA--------PLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp TTTCEEEEEEESSC--------CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cCCCceEEEECCcC--------CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 24789999986542 246789999999999999887653
No 132
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.58 E-value=1.5e-14 Score=116.07 Aligned_cols=123 Identities=13% Similarity=0.087 Sum_probs=90.1
Q ss_pred cCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-ccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKV 159 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 159 (262)
.++.+|||+|||+|..+..+++. ...+|+++|+++.+++.|++++... +...+++++++|+.+. +....
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~l~~~~~ 128 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA--------GLQDKVTILNGASQDLIPQLKK 128 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--------TCGGGEEEEESCHHHHGGGTTT
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc--------CCCCceEEEECCHHHHHHHHHH
Confidence 46789999999999999988763 3568999999999999999987632 2334699999998653 22100
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC---ChHHHHHHHhh
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP---DANVIIKKLRE 218 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~---~~~~~~~~~~~ 218 (262)
....++||+|++....++. .....++..+ ++|+|||++++... ....+.+.+..
T Consensus 129 ~~~~~~fD~V~~d~~~~~~----~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 185 (221)
T 3u81_A 129 KYDVDTLDMVFLDHWKDRY----LPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRG 185 (221)
T ss_dssp TSCCCCCSEEEECSCGGGH----HHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHH
T ss_pred hcCCCceEEEEEcCCcccc----hHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhh
Confidence 0012689999998877765 5556677777 99999999998643 33444555544
No 133
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.58 E-value=1.5e-14 Score=122.55 Aligned_cols=113 Identities=16% Similarity=0.197 Sum_probs=89.7
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhc-C-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (262)
...++..+...++.+|||+|||+|.++..+++. . .++|+|+|+|+.+++.|++++...+. .++.+.++|
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~---------~~v~~~~~d 134 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI---------ENVIFVCGD 134 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC---------CSEEEEESC
T ss_pred HHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC---------CCeEEEECC
Confidence 444555556678899999999999998888764 2 35699999999999999998763221 248999999
Q ss_pred ccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
+.+... +.++||+|++..+++|+ . ..+.++|+|||.+++.+...
T Consensus 135 ~~~~~~-----~~~~fD~Iv~~~~~~~~--~--------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 135 GYYGVP-----EFSPYDVIFVTVGVDEV--P--------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp GGGCCG-----GGCCEEEEEECSBBSCC--C--------HHHHHHEEEEEEEEEEBCBG
T ss_pred hhhccc-----cCCCeEEEEEcCCHHHH--H--------HHHHHhcCCCcEEEEEECCC
Confidence 877543 35789999999999987 2 46888999999999987544
No 134
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.58 E-value=7.7e-15 Score=118.61 Aligned_cols=103 Identities=16% Similarity=0.129 Sum_probs=81.6
Q ss_pred hccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc----cc
Q 024797 81 YARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE----VH 155 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~----~~ 155 (262)
...++.+|||+|||+|.++..++.. +.++|+|+|+|+.+++.++++... ..++.++++|+.. .+
T Consensus 71 ~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~-----------~~~v~~~~~d~~~~~~~~~ 139 (230)
T 1fbn_A 71 PIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE-----------RENIIPILGDANKPQEYAN 139 (230)
T ss_dssp CCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT-----------CTTEEEEECCTTCGGGGTT
T ss_pred CCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc-----------CCCeEEEECCCCCcccccc
Confidence 3457889999999999999988765 446899999999999999988652 1468999999877 43
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+ . ++||+|++ ++ ........++.++.++|+|||.+++.+
T Consensus 140 ~-----~-~~~D~v~~-----~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 140 I-----V-EKVDVIYE-----DV-AQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp T-----S-CCEEEEEE-----CC-CSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-----C-ccEEEEEE-----ec-CChhHHHHHHHHHHHhCCCCcEEEEEE
Confidence 3 3 78999983 22 123345778999999999999999863
No 135
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.58 E-value=8e-15 Score=125.73 Aligned_cols=136 Identities=22% Similarity=0.276 Sum_probs=92.6
Q ss_pred hhHHHHHHHHHhhhhccccHhhhhcCccccchhHHHHHHHHHHHHhccCCCeEEEecCC------CCcchHHHHhc--CC
Q 024797 36 TKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACG------KGGDLIKWDKA--KI 107 (262)
Q Consensus 36 ~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG------~G~~~~~l~~~--~~ 107 (262)
....|+.++..|....... ...+......++..+ ..++.+||||||| +|..+..+++. +.
T Consensus 180 ~~~~fd~lA~~Y~tDK~~~-----------~h~y~~~Ye~lL~~l-~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~ 247 (419)
T 3sso_A 180 RKPDLSELSSRYFTPKFGF-----------LHWFTPHYDRHFRDY-RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPR 247 (419)
T ss_dssp CCCCHHHHHHHTTCTTBSS-----------SCBCHHHHHHHHGGG-TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTT
T ss_pred CCccHHHHHHHhCCCcccc-----------cchHHHHHHHHHHhh-cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCC
Confidence 3456777888885322210 112222334444433 2467899999999 66666666653 56
Q ss_pred CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc-cCCCCCeeEEEEcccccccCCCHHHHH
Q 024797 108 GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV-LADDAPFDICSCQFAMHYSWSTEARAR 186 (262)
Q Consensus 108 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~~~fD~V~~~~~l~~~~~~~~~~~ 186 (262)
.+|+|+|+|+.|. .. ..+++++++|+.++++... ...+++||+|++... ++. .+..
T Consensus 248 a~V~GVDiSp~m~------~~------------~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~----~d~~ 304 (419)
T 3sso_A 248 GQIYGLDIMDKSH------VD------------ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HIN----AHVR 304 (419)
T ss_dssp CEEEEEESSCCGG------GC------------BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCH----HHHH
T ss_pred CEEEEEECCHHHh------hc------------CCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccc----hhHH
Confidence 6899999999982 11 3469999999998776210 001588999998754 544 7789
Q ss_pred HHHHHHHhccCCCcEEEEEe
Q 024797 187 RALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 187 ~~l~~~~~~L~~gG~li~~~ 206 (262)
.+|+++.++|||||++++..
T Consensus 305 ~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 305 TSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp HHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEEEe
Confidence 99999999999999999964
No 136
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.58 E-value=5.5e-15 Score=126.54 Aligned_cols=121 Identities=15% Similarity=0.203 Sum_probs=92.8
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (262)
..+.++..+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++.... ...+.++++|
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~----------~~~~~~~~~d 253 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN----------GVEGEVFASN 253 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT----------TCCCEEEECS
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh----------CCCCEEEEcc
Confidence 34445554434567799999999999999887754 348999999999999999987632 2236678888
Q ss_pred ccccccccccCCCCCeeEEEEcccccccCC-CHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWS-TEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~-~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
+... .+++||+|+++..+|+... .......+++++.++|+|||.+++..++.
T Consensus 254 ~~~~-------~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 254 VFSE-------VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp TTTT-------CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred cccc-------ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 7653 3578999999998875210 23567899999999999999999987654
No 137
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.58 E-value=7.2e-15 Score=117.62 Aligned_cols=116 Identities=17% Similarity=0.190 Sum_probs=83.2
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (262)
.+..+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.+.+...+.. ......++.++++|+.++
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~-----~~~~~~~v~~~~~d~~~l 93 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKP-----AKGGLPNLLYLWATAERL 93 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCG-----GGTCCTTEEEEECCSTTC
T ss_pred HHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhh-----hhcCCCceEEEecchhhC
Confidence 4444556788899999999999999888753 5689999999999996543332110 011123699999999998
Q ss_pred ccccccCCCCCeeEEEEccccc-----ccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 155 HLDKVLADDAPFDICSCQFAMH-----YSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~-----~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
++ +++. |.|.+..... |+ .++..+++++.++|||||.+++++
T Consensus 94 ~~-----~~~~-d~v~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 94 PP-----LSGV-GELHVLMPWGSLLRGVL----GSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp CS-----CCCE-EEEEEESCCHHHHHHHH----TSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CC-----CCCC-CEEEEEccchhhhhhhh----ccHHHHHHHHHHHcCCCcEEEEEe
Confidence 76 4555 7776433211 22 234789999999999999999975
No 138
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.58 E-value=8.2e-15 Score=126.01 Aligned_cols=119 Identities=18% Similarity=0.166 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeC
Q 024797 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (262)
Q Consensus 70 ~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (262)
..|.+.+.......++.+|||||||+|.++...++.+..+|+|||.|+ |++.|++.... +++..+|+++++
T Consensus 69 ~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~--------n~~~~~i~~i~~ 139 (376)
T 4hc4_A 69 DAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRF--------NGLEDRVHVLPG 139 (376)
T ss_dssp HHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHH--------TTCTTTEEEEES
T ss_pred HHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHH--------cCCCceEEEEee
Confidence 344444544444457899999999999888877777788999999996 88999887763 345667999999
Q ss_pred cccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024797 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 150 d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
|+.++.+ +++||+|++-..-..+ ........++....++|+|||.++.
T Consensus 140 ~~~~~~l------pe~~DvivsE~~~~~l-~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 140 PVETVEL------PEQVDAIVSEWMGYGL-LHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CTTTCCC------SSCEEEEECCCCBTTB-TTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred eeeeecC------CccccEEEeecccccc-cccchhhhHHHHHHhhCCCCceECC
Confidence 9998875 4789999984422211 1234577888899999999999873
No 139
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.58 E-value=4.4e-14 Score=121.46 Aligned_cols=124 Identities=19% Similarity=0.070 Sum_probs=95.4
Q ss_pred HHHHHHhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 75 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
.++......++.+|||+|||+|.++..++.. +...++|+|+++.+++.|++++... +.. ++++.++|+.
T Consensus 194 ~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~--------g~~-~i~~~~~D~~ 264 (354)
T 3tma_A 194 ALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS--------GLS-WIRFLRADAR 264 (354)
T ss_dssp HHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT--------TCT-TCEEEECCGG
T ss_pred HHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc--------CCC-ceEEEeCChh
Confidence 3444445567889999999999999988763 4568999999999999999998743 223 6999999999
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCC----HHHHHHHHHHHHhccCCCcEEEEEeCChHHH
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWST----EARARRALANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~----~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
+++. +.+.||+|+++..+...... ......+++++.++|+|||.+++.+++.+.+
T Consensus 265 ~~~~-----~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~ 323 (354)
T 3tma_A 265 HLPR-----FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALL 323 (354)
T ss_dssp GGGG-----TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHH
T ss_pred hCcc-----ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHH
Confidence 8875 45679999997654332111 1234789999999999999999999988654
No 140
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.57 E-value=1.8e-14 Score=125.96 Aligned_cols=121 Identities=12% Similarity=0.175 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHH-------HHHhccCccccccccCCC
Q 024797 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDC-------RTRYNGDADHHQRRKKFS 141 (262)
Q Consensus 70 ~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a-------~~~~~~~~~~~~~~~~~~ 141 (262)
..++..++..+...++.+|||+|||+|.++..++.. +...|+|+|+++.+++.| ++++...+.. .
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-------~ 300 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-------L 300 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-------C
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-------C
Confidence 345566666666778899999999999999988773 556899999999999998 7666532210 1
Q ss_pred CCeEEEeCccccc--ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 142 FPARLICGDCYEV--HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 142 ~~v~~~~~d~~~~--~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.+++++++|.... ++.. ..++||+|+++.++ +. ++...++.++.++|+|||.+++.
T Consensus 301 ~nV~~i~gD~~~~~~~~~~---~~~~FDvIvvn~~l-~~----~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 301 NNVEFSLKKSFVDNNRVAE---LIPQCDVILVNNFL-FD----EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CCEEEEESSCSTTCHHHHH---HGGGCSEEEECCTT-CC----HHHHHHHHHHHTTCCTTCEEEES
T ss_pred CceEEEEcCcccccccccc---ccCCCCEEEEeCcc-cc----ccHHHHHHHHHHhCCCCeEEEEe
Confidence 4688988865421 1100 13689999987666 22 56778899999999999999986
No 141
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.57 E-value=1.8e-14 Score=116.58 Aligned_cols=105 Identities=16% Similarity=0.194 Sum_probs=84.2
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc-ccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 159 (262)
..++.+|||+|||+|..+..++.. +..+|+++|+++.+++.|++++... +...++.++++|+.+... .
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~~~-- 138 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY--------HFENQVRIIEGNALEQFENV-- 138 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT--------TCTTTEEEEESCGGGCHHHH--
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCcEEEEECCHHHHHHhh--
Confidence 357889999999999999988763 3568999999999999999988743 223469999999976421 0
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.+++||+|++..... ....+++.+.++|+|||++++.
T Consensus 139 --~~~~fD~V~~~~~~~-------~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 139 --NDKVYDMIFIDAAKA-------QSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp --TTSCEEEEEEETTSS-------SHHHHHHHHGGGEEEEEEEEEE
T ss_pred --ccCCccEEEEcCcHH-------HHHHHHHHHHHhcCCCeEEEEe
Confidence 257899999876543 3567999999999999999985
No 142
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.57 E-value=2.3e-14 Score=123.41 Aligned_cols=115 Identities=21% Similarity=0.255 Sum_probs=91.3
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (262)
++..+...++.+|||+|||+|.++..+++. +...++++|+ +.+++.|++++... +...+++++++|+.+
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~- 244 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE--------GLSDRVDVVEGDFFE- 244 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--------TCTTTEEEEECCTTS-
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--------CCCCceEEEeCCCCC-
Confidence 344444456789999999999999888764 3457999999 99999999987632 233469999999875
Q ss_pred ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++ + ..||+|++..++|++ +.++...+++++.++|+|||.+++..+.
T Consensus 245 ~~-----~-~~~D~v~~~~vl~~~--~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 245 PL-----P-RKADAIILSFVLLNW--PDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp CC-----S-SCEEEEEEESCGGGS--CHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CC-----C-CCccEEEEcccccCC--CHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 33 3 349999999999988 6666789999999999999999887543
No 143
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.57 E-value=4.4e-15 Score=118.57 Aligned_cols=88 Identities=22% Similarity=0.271 Sum_probs=73.7
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..+. ..++|+|+|+. . +.+.++|+.++++ +
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------~---------------~~~~~~d~~~~~~-----~ 112 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------D---------------PRVTVCDMAQVPL-----E 112 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------S---------------TTEEESCTTSCSC-----C
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------C---------------ceEEEeccccCCC-----C
Confidence 467899999999998877662 58999999986 1 6678999988775 6
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+++||+|++..++|+ .+...+++++.++|+|||.+++..+.
T Consensus 113 ~~~fD~v~~~~~l~~-----~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 113 DESVDVAVFCLSLMG-----TNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp TTCEEEEEEESCCCS-----SCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred CCCEeEEEEehhccc-----cCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 789999999999963 45688999999999999999997643
No 144
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.56 E-value=8.5e-15 Score=117.99 Aligned_cols=111 Identities=18% Similarity=0.189 Sum_probs=77.2
Q ss_pred hccCCCeEEEecCCCCcchHHHHh-cCCCeEEEEeCC-hhHHHHH---HHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 81 YARRGDVVLDLACGKGGDLIKWDK-AKIGYYVGIDIA-EGSIEDC---RTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s-~~~~~~a---~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
...++.+|||||||+|.++..+++ .+...|+|+|+| +.|++.| +++....+ ..++.+.++|+..++
T Consensus 21 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~---------~~~v~~~~~d~~~l~ 91 (225)
T 3p2e_A 21 IGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG---------LSNVVFVIAAAESLP 91 (225)
T ss_dssp HTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC---------CSSEEEECCBTTBCC
T ss_pred hCCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC---------CCCeEEEEcCHHHhh
Confidence 346788999999999999998875 345579999999 7777776 55544221 235899999998875
Q ss_pred cccccCCCCCeeEEEEcccccccCC-CHHHHHHHHHHHHhccCCCcEEEE
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWS-TEARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~-~~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
.. ..+.+|.|.+++...+... ...+...++++++++|||||.+++
T Consensus 92 ~~----~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 92 FE----LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp GG----GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred hh----ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 31 1256777766553321000 001124689999999999999988
No 145
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.56 E-value=1.2e-14 Score=120.61 Aligned_cols=112 Identities=13% Similarity=0.183 Sum_probs=87.8
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccC-ccccccccCCCCCeEEEeCccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGD-ADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
++..+...++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|++++... + ..++.+.++|+.
T Consensus 102 ~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---------~~~v~~~~~d~~ 172 (275)
T 1yb2_A 102 IIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---------IGNVRTSRSDIA 172 (275)
T ss_dssp ----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---------CTTEEEECSCTT
T ss_pred HHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---------CCcEEEEECchh
Confidence 333445567889999999999999988764 3568999999999999999987632 1 245899999987
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
+ ++ ++++||+|++. + +++..+++++.++|+|||.+++.+++.+.
T Consensus 173 ~-~~-----~~~~fD~Vi~~-----~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 216 (275)
T 1yb2_A 173 D-FI-----SDQMYDAVIAD-----I----PDPWNHVQKIASMMKPGSVATFYLPNFDQ 216 (275)
T ss_dssp T-CC-----CSCCEEEEEEC-----C----SCGGGSHHHHHHTEEEEEEEEEEESSHHH
T ss_pred c-cC-----cCCCccEEEEc-----C----cCHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 7 33 56789999982 2 23467899999999999999999988744
No 146
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.56 E-value=1.6e-14 Score=116.43 Aligned_cols=109 Identities=15% Similarity=0.099 Sum_probs=78.5
Q ss_pred HhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (262)
+.+.++.+|||+|||+|..+..++.. +.+.|+|+|+|+.|++...+...+ ..++.++++|+......
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-----------r~nv~~i~~Da~~~~~~ 140 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-----------RPNIFPLLADARFPQSY 140 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-----------CTTEEEEECCTTCGGGT
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-----------cCCeEEEEcccccchhh
Confidence 34678999999999999999888763 567999999999987554443321 13599999998764321
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.. ..++||+|++..+.. .....+...+.+.|||||.|++++.
T Consensus 141 ~~--~~~~~D~I~~d~a~~------~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 141 KS--VVENVDVLYVDIAQP------DQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp TT--TCCCEEEEEECCCCT------THHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hc--cccceEEEEecCCCh------hHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 11 246899999886542 2234445566779999999998853
No 147
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.56 E-value=3e-14 Score=121.43 Aligned_cols=103 Identities=20% Similarity=0.134 Sum_probs=86.6
Q ss_pred CeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCC
Q 024797 86 DVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (262)
Q Consensus 86 ~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (262)
.+|||+|||+|..+..+++. +..+++++|+ +.+++.|++++... +...+++++.+|+.+ ++ + +
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~-~~-----~-~ 232 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL--------LAGERVSLVGGDMLQ-EV-----P-S 232 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH--------HHTTSEEEEESCTTT-CC-----C-S
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc--------CCCCcEEEecCCCCC-CC-----C-C
Confidence 89999999999999988764 4458999999 99999999886521 223469999999877 44 3 6
Q ss_pred CeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 165 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
.||+|++..++|++ +.+....++++++++|+|||++++..
T Consensus 233 ~~D~v~~~~vl~~~--~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 233 NGDIYLLSRIIGDL--DEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp SCSEEEEESCGGGC--CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEEchhccCC--CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 79999999999988 66777899999999999999998874
No 148
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.56 E-value=2.8e-14 Score=116.89 Aligned_cols=115 Identities=18% Similarity=0.279 Sum_probs=91.4
Q ss_pred HHHHHHhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 75 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
.++......++.+|||+|||+|.++..++.. +..+++++|+|+.+++.|++++... +...++++.++|+.
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~ 155 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA--------GFDDRVTIKLKDIY 155 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH--------TCTTTEEEECSCGG
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc--------CCCCceEEEECchh
Confidence 3455556678899999999999999988775 3668999999999999999987632 22345999999987
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHH
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
+. + ++++||+|++.. .++..++.++.++|+|||.+++..+..+..
T Consensus 156 ~~-~-----~~~~~D~v~~~~---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 200 (255)
T 3mb5_A 156 EG-I-----EEENVDHVILDL---------PQPERVVEHAAKALKPGGFFVAYTPCSNQV 200 (255)
T ss_dssp GC-C-----CCCSEEEEEECS---------SCGGGGHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred hc-c-----CCCCcCEEEECC---------CCHHHHHHHHHHHcCCCCEEEEEECCHHHH
Confidence 54 3 567899999743 234578999999999999999998876543
No 149
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.56 E-value=1.6e-15 Score=120.70 Aligned_cols=124 Identities=15% Similarity=0.068 Sum_probs=72.3
Q ss_pred HHHHHHHHhc-cCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc
Q 024797 73 IKSVLVQLYA-RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (262)
Q Consensus 73 ~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (262)
+..++..+.. .++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.|++++... ..+++++++|
T Consensus 18 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----------~~~~~~~~~d 87 (215)
T 4dzr_A 18 VEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF----------GAVVDWAAAD 87 (215)
T ss_dssp HHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------------CCHHH
T ss_pred HHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh----------CCceEEEEcc
Confidence 3444444443 578899999999999999888754 448999999999999999887632 1158889999
Q ss_pred ccccccccccCCCCCeeEEEEcccccccCC----CH------------------HHHHHHHHHHHhccCCCcE-EEEEeC
Q 024797 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWS----TE------------------ARARRALANVSALLRPGGT-FIGTMP 207 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~----~~------------------~~~~~~l~~~~~~L~~gG~-li~~~~ 207 (262)
+.+ ++.......++||+|+++..++.... .. +....+++++.++|+|||+ +++.++
T Consensus 88 ~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 88 GIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 877 33110001389999999754432200 00 1127888999999999999 666664
No 150
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.56 E-value=1.4e-13 Score=108.68 Aligned_cols=102 Identities=14% Similarity=0.075 Sum_probs=76.8
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|+++.. +++++++|+.+++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~--------------~~~~~~~d~~~~~------ 108 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG--------------GVNFMVADVSEIS------ 108 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT--------------TSEEEECCGGGCC------
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC--------------CCEEEECcHHHCC------
Confidence 44678999999999999998877655579999999999999998763 4889999988742
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
++||+|+++..+++. .......+++++.+++ |+.+++..+..
T Consensus 109 --~~~D~v~~~~p~~~~--~~~~~~~~l~~~~~~~--g~~~~~~~~~~ 150 (200)
T 1ne2_A 109 --GKYDTWIMNPPFGSV--VKHSDRAFIDKAFETS--MWIYSIGNAKA 150 (200)
T ss_dssp --CCEEEEEECCCC---------CHHHHHHHHHHE--EEEEEEEEGGG
T ss_pred --CCeeEEEECCCchhc--cCchhHHHHHHHHHhc--CcEEEEEcCch
Confidence 689999999998876 2233457889999998 55444444433
No 151
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.56 E-value=1.2e-14 Score=111.47 Aligned_cols=109 Identities=13% Similarity=0.107 Sum_probs=80.5
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
++.+|||+|||+|.++..+++... .++|+|+|+.+++.|+++.... +. +++++++|+.+.... .....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~--------~~--~~~~~~~d~~~~~~~-~~~~~ 108 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRT--------GL--GARVVALPVEVFLPE-AKAQG 108 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHH--------TC--CCEEECSCHHHHHHH-HHHTT
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHc--------CC--ceEEEeccHHHHHHh-hhccC
Confidence 678999999999999998877654 4999999999999999987631 11 689999998763210 00013
Q ss_pred CCeeEEEEcccccccCCCHHHHHHHHHHHH--hccCCCcEEEEEeCChH
Q 024797 164 APFDICSCQFAMHYSWSTEARARRALANVS--ALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~--~~L~~gG~li~~~~~~~ 210 (262)
++||+|+++..++ . . ...+++.+. ++|+|||.++++++...
T Consensus 109 ~~~D~i~~~~~~~-~--~---~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 109 ERFTVAFMAPPYA-M--D---LAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CCEEEEEECCCTT-S--C---TTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred CceEEEEECCCCc-h--h---HHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 4899999987664 1 2 223444444 99999999999887653
No 152
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.56 E-value=3e-14 Score=118.47 Aligned_cols=105 Identities=10% Similarity=0.014 Sum_probs=85.2
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++... +...+++++++|+.++..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n--------~~~~~v~~~~~D~~~~~~----- 189 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLN--------KVEDRMSAYNMDNRDFPG----- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHT--------TCTTTEEEECSCTTTCCC-----
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHc--------CCCceEEEEECCHHHhcc-----
Confidence 3568999999999999999998765557999999999999999987632 233458999999988763
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
.++||+|++..... ...++.++.++|+|||.+++....
T Consensus 190 -~~~fD~Vi~~~p~~--------~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 190 -ENIADRILMGYVVR--------THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp -CSCEEEEEECCCSS--------GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred -cCCccEEEECCchh--------HHHHHHHHHHHCCCCeEEEEEEee
Confidence 67899999865422 256888999999999999886654
No 153
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.56 E-value=1.4e-14 Score=116.48 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=81.9
Q ss_pred CCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCC-CCeEEEeCcccccccccccC
Q 024797 85 GDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS-FPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~ 161 (262)
+.+|||+|||+|..+..+++. ..++|+++|+|+++++.|++++...+ .. .+++++++|+.+.... .
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--------~~~~~i~~~~gda~~~l~~---~ 125 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--------YSPSRVRFLLSRPLDVMSR---L 125 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--------CCGGGEEEECSCHHHHGGG---S
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--------CCcCcEEEEEcCHHHHHHH---h
Confidence 449999999999999988763 35689999999999999999987432 23 4699999998764211 0
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
++++||+|++..... +...+++++.++|+|||.+++.
T Consensus 126 ~~~~fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 126 ANDSYQLVFGQVSPM-------DLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CTTCEEEEEECCCTT-------THHHHHHHHHHHEEEEEEEEET
T ss_pred cCCCcCeEEEcCcHH-------HHHHHHHHHHHHcCCCcEEEEe
Confidence 367899999876543 3466899999999999999985
No 154
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.56 E-value=2.6e-14 Score=115.83 Aligned_cols=113 Identities=15% Similarity=0.148 Sum_probs=87.3
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
...++..+...++.+|||+|||+|.++..+++....+|+++|+++.+++.|++++...+ ..++.+.++|+
T Consensus 80 ~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~---------~~~v~~~~~d~- 149 (235)
T 1jg1_A 80 VAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAG---------VKNVHVILGDG- 149 (235)
T ss_dssp HHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTT---------CCSEEEEESCG-
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcC---------CCCcEEEECCc-
Confidence 34455555667888999999999999988876432689999999999999999876322 12488999997
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
..++. ...+||+|++..+++++ . .++.+.|+|||.+++.+++.
T Consensus 150 ~~~~~----~~~~fD~Ii~~~~~~~~--~--------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 150 SKGFP----PKAPYDVIIVTAGAPKI--P--------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp GGCCG----GGCCEEEEEECSBBSSC--C--------HHHHHTEEEEEEEEEEECSS
T ss_pred ccCCC----CCCCccEEEECCcHHHH--H--------HHHHHhcCCCcEEEEEEecC
Confidence 33331 23469999999999877 2 26889999999999998765
No 155
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.55 E-value=3.2e-14 Score=116.66 Aligned_cols=117 Identities=16% Similarity=0.252 Sum_probs=92.2
Q ss_pred HHHHHHhccCCCeEEEecCCCCcchHHHHhc-C-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 75 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
.++..+...++.+|||+|||+|.++..+++. . ..+++++|+|+.+++.|++++... .+ ..++.+.++|+.
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-------~g-~~~v~~~~~d~~ 158 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAF-------WQ-VENVRFHLGKLE 158 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-------CC-CCCEEEEESCGG
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh-------cC-CCCEEEEECchh
Confidence 3444555678899999999999999988775 3 568999999999999999987521 01 346899999998
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHH
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVII 213 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~ 213 (262)
+.++ ++++||+|++.. .+...++.++.++|+|||.+++.++..+.+.
T Consensus 159 ~~~~-----~~~~~D~v~~~~---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 205 (258)
T 2pwy_A 159 EAEL-----EEAAYDGVALDL---------MEPWKVLEKAALALKPDRFLVAYLPNITQVL 205 (258)
T ss_dssp GCCC-----CTTCEEEEEEES---------SCGGGGHHHHHHHEEEEEEEEEEESCHHHHH
T ss_pred hcCC-----CCCCcCEEEECC---------cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHH
Confidence 7755 567899999732 2345789999999999999999999875443
No 156
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.55 E-value=1.8e-14 Score=119.73 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=92.7
Q ss_pred HHHHHHhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccC-ccccccccCCCCCeEEEeCcc
Q 024797 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGD-ADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 75 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~v~~~~~d~ 151 (262)
.++..+...++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++... + ....++.+.++|+
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g-------~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYG-------QPPDNWRLVVSDL 162 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHT-------SCCTTEEEECSCG
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-------CCCCcEEEEECch
Confidence 3444555678899999999999999988764 3568999999999999999987521 1 1134689999999
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHH
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVII 213 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~ 213 (262)
.+.++ ++++||+|++... ++..++.++.++|+|||.+++.+++.+.+.
T Consensus 163 ~~~~~-----~~~~~D~v~~~~~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 210 (280)
T 1i9g_A 163 ADSEL-----PDGSVDRAVLDML---------APWEVLDAVSRLLVAGGVLMVYVATVTQLS 210 (280)
T ss_dssp GGCCC-----CTTCEEEEEEESS---------CGGGGHHHHHHHEEEEEEEEEEESSHHHHH
T ss_pred HhcCC-----CCCceeEEEECCc---------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHH
Confidence 88765 5678999998331 234789999999999999999999876543
No 157
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=4.3e-14 Score=115.58 Aligned_cols=108 Identities=14% Similarity=0.105 Sum_probs=85.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-C-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-cccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDK 158 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~ 158 (262)
..++.+|||+|||+|..+..+++. + .++|+++|+|+.+++.|++++... +...+++++++|+.+. +..
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------g~~~~v~~~~~d~~~~l~~~- 131 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA--------GVDQRVTLREGPALQSLESL- 131 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT--------TCTTTEEEEESCHHHHHHTC-
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCcEEEEEcCHHHHHHhc-
Confidence 357889999999999999988764 2 568999999999999999988742 3345699999998763 220
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
...++||+|++.... .....+++++.++|+|||++++...
T Consensus 132 --~~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 132 --GECPAFDLIFIDADK-------PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp --CSCCCCSEEEECSCG-------GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred --CCCCCeEEEEECCch-------HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 023589999987643 3456789999999999999998754
No 158
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.55 E-value=2.5e-14 Score=117.02 Aligned_cols=133 Identities=11% Similarity=0.078 Sum_probs=87.3
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhc---CCCeEEEEeCChhHHHHHHHHhccC---cccccc----------
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA---KIGYYVGIDIAEGSIEDCRTRYNGD---ADHHQR---------- 136 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~~~~a~~~~~~~---~~~~~~---------- 136 (262)
+..++..+...++.+|||+|||+|.++..++.. ...+|+|+|+|+.+++.|++++... +..+..
T Consensus 40 ~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (250)
T 1o9g_A 40 FQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERF 119 (250)
T ss_dssp HHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhc
Confidence 333443332235679999999999998888764 2447999999999999999887633 111000
Q ss_pred -------ccCCCCCeE-------------EEeCcccccccccccCCCCCeeEEEEcccccccCC-----CHHHHHHHHHH
Q 024797 137 -------RKKFSFPAR-------------LICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWS-----TEARARRALAN 191 (262)
Q Consensus 137 -------~~~~~~~v~-------------~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~-----~~~~~~~~l~~ 191 (262)
......++. +.++|+.+...........+||+|+++..+.+... ..+....++++
T Consensus 120 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~ 199 (250)
T 1o9g_A 120 GKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRS 199 (250)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHH
Confidence 000000144 89999876421000001348999999876655421 14677899999
Q ss_pred HHhccCCCcEEEEE
Q 024797 192 VSALLRPGGTFIGT 205 (262)
Q Consensus 192 ~~~~L~~gG~li~~ 205 (262)
+.++|+|||++++.
T Consensus 200 ~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 200 LASALPAHAVIAVT 213 (250)
T ss_dssp HHHHSCTTCEEEEE
T ss_pred HHHhcCCCcEEEEe
Confidence 99999999999984
No 159
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.55 E-value=2.5e-14 Score=115.75 Aligned_cols=109 Identities=18% Similarity=0.168 Sum_probs=82.8
Q ss_pred hccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 81 YARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
...++.+|||+|||+|.++..+++. +.++|+|+|+|+.|++.+.+.... ..++.++++|+.+.....
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-----------~~~v~~~~~d~~~~~~~~ 142 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-----------RTNIIPVIEDARHPHKYR 142 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-----------CTTEEEECSCTTCGGGGG
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-----------cCCeEEEEcccCChhhhc
Confidence 3457889999999999999988774 456899999999988877766542 145899999998732100
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
..+++||+|++... .......++.++.++|+|||.+++++..
T Consensus 143 --~~~~~~D~V~~~~~------~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 143 --MLIAMVDVIFADVA------QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp --GGCCCEEEEEECCC------CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred --ccCCcEEEEEEcCC------CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 03578999998654 1234566788999999999999997653
No 160
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.54 E-value=8.3e-14 Score=113.48 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=91.0
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
++......++.+|||+|||+|.++..+++. ..+++++|+++.+++.|+++.... +...++.+.++|+.+..
T Consensus 83 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 83 IALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKF--------NLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHT--------TCCTTEEEECSCTTTSC
T ss_pred HHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHc--------CCCCcEEEEEcChhhcc
Confidence 444445568899999999999999988876 668999999999999999987632 22346899999987754
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHH
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIK 214 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~ 214 (262)
. +++.||+|++.. .++..+++++.++|+|||.+++.+++.+.+.+
T Consensus 154 ~-----~~~~~D~v~~~~---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~ 198 (248)
T 2yvl_A 154 V-----PEGIFHAAFVDV---------REPWHYLEKVHKSLMEGAPVGFLLPTANQVIK 198 (248)
T ss_dssp C-----CTTCBSEEEECS---------SCGGGGHHHHHHHBCTTCEEEEEESSHHHHHH
T ss_pred c-----CCCcccEEEECC---------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHH
Confidence 2 356899999742 23457889999999999999999998755443
No 161
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.54 E-value=6.3e-14 Score=114.40 Aligned_cols=122 Identities=13% Similarity=0.193 Sum_probs=84.5
Q ss_pred cCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc-ccccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VHLDKVL 160 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 160 (262)
.++.+|||+|||+|.++..++... ...|+|+|+|+.+++.|++++......+....+ ..++.++++|+.+ ++. .
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~~nv~~~~~D~~~~l~~---~ 123 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG-FQNINVLRGNAMKFLPN---F 123 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST-TTTEEEEECCTTSCGGG---T
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC-CCcEEEEeccHHHHHHH---h
Confidence 467799999999999999988754 448999999999999998876521000000001 2469999999876 331 1
Q ss_pred CCCCCeeEEEEcccccccCCCHHH------HHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEAR------ARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~------~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
.+.+.+|.|++.+.-.+. .... ...++.++.++|+|||.|++.+....
T Consensus 124 ~~~~~~d~v~~~~p~p~~--k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~ 177 (246)
T 2vdv_E 124 FEKGQLSKMFFCFPDPHF--KQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKD 177 (246)
T ss_dssp SCTTCEEEEEEESCCCC--------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred ccccccCEEEEECCCccc--ccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHH
Confidence 257889999865432211 0000 14799999999999999999876654
No 162
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.54 E-value=2.5e-14 Score=115.16 Aligned_cols=108 Identities=15% Similarity=0.155 Sum_probs=83.9
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcC------CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAK------IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
..++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++...+... ....++.++++|+....
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~~~~~v~~~~~d~~~~~ 153 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPEL----LKIDNFKIIHKNIYQVN 153 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGG----GSSTTEEEEECCGGGCC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccc----cccCCEEEEECChHhcc
Confidence 5678899999999999988887643 3589999999999999999876321000 00235899999987743
Q ss_pred ----cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 156 ----LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 156 ----~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
. ..++||+|++...++++ +.++.++|+|||++++.++.
T Consensus 154 ~~~~~-----~~~~fD~I~~~~~~~~~----------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 154 EEEKK-----ELGLFDAIHVGASASEL----------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHH-----HHCCEEEEEECSBBSSC----------CHHHHHHEEEEEEEEEEEEE
T ss_pred cccCc-----cCCCcCEEEECCchHHH----------HHHHHHhcCCCcEEEEEEcc
Confidence 2 35789999999988765 36789999999999998764
No 163
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.54 E-value=4.2e-14 Score=113.76 Aligned_cols=109 Identities=23% Similarity=0.266 Sum_probs=84.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (262)
..++.+|||+|||+|..+..+++. ...+|+|+|+|+.+++.++++....+... ....++.+.++|+.....
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~----~~~~~v~~~~~d~~~~~~--- 147 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTL----LSSGRVQLVVGDGRMGYA--- 147 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHH----HHTSSEEEEESCGGGCCG---
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccc----cCCCcEEEEECCcccCcc---
Confidence 567889999999999999888764 33589999999999999998876311000 002358999999876543
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
..++||+|++...++++ +.++.++|+|||.++++++..
T Consensus 148 --~~~~fD~i~~~~~~~~~----------~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 148 --EEAPYDAIHVGAAAPVV----------PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp --GGCCEEEEEECSBBSSC----------CHHHHHTEEEEEEEEEEESCT
T ss_pred --cCCCcCEEEECCchHHH----------HHHHHHhcCCCcEEEEEEecC
Confidence 35789999999988765 257889999999999987653
No 164
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.54 E-value=9.6e-14 Score=116.06 Aligned_cols=115 Identities=16% Similarity=0.200 Sum_probs=81.8
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++...+.. .....+++++++|+......
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~----~~~~~rv~~~~~D~~~~l~~--- 153 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAG----SYDDPRFKLVIDDGVNFVNQ--- 153 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSS----CTTCTTCCEECSCSCC---C---
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccc----cccCCceEEEEChHHHHHhh---
Confidence 346789999999999999988875 4568999999999999999987531100 00134699999998765321
Q ss_pred CCCCCeeEEEEcccccccCCCHHHH--HHHHHHHHhccCCCcEEEEEe
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARA--RRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~--~~~l~~~~~~L~~gG~li~~~ 206 (262)
..++||+|++....... ..... ..+++.+.++|+|||++++..
T Consensus 154 -~~~~fDvIi~D~~~p~~--~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 154 -TSQTFDVIISDCTDPIG--PGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -CCCCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred -cCCCccEEEECCCCccC--cchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 35789999997654322 11122 679999999999999999875
No 165
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.53 E-value=6.5e-14 Score=116.24 Aligned_cols=111 Identities=13% Similarity=0.113 Sum_probs=85.5
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.|+++....+ . .++.++++|+.+. .
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~--------~-~~v~~~~~d~~~~-~----- 172 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLA--------I-KNIHILQSDWFSA-L----- 172 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHT--------C-CSEEEECCSTTGG-G-----
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--------C-CceEEEEcchhhh-c-----
Confidence 56789999999999999988753 45689999999999999999876321 1 2599999998764 2
Q ss_pred CCCCeeEEEEccccccc-----------CCC----------HHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 162 DDAPFDICSCQFAMHYS-----------WST----------EARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~-----------~~~----------~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++++||+|+++...+.. +.+ ......++.++.++|+|||.+++..+.
T Consensus 173 ~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~ 240 (276)
T 2b3t_A 173 AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW 240 (276)
T ss_dssp TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS
T ss_pred ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc
Confidence 35789999998433211 001 145688999999999999999998753
No 166
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.53 E-value=8.8e-14 Score=118.71 Aligned_cols=125 Identities=18% Similarity=0.256 Sum_probs=88.5
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccc--cccccCCCCCeEEEeCcc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADH--HQRRKKFSFPARLICGDC 151 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~~~~~~~v~~~~~d~ 151 (262)
++..+...++.+|||+|||+|.++..+++. +.++|+|+|+++.+++.|++++...+.. .........++++.++|+
T Consensus 97 ~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~ 176 (336)
T 2b25_A 97 ILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI 176 (336)
T ss_dssp HHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred HHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence 444556678899999999999999988774 3368999999999999999987631100 000001134699999999
Q ss_pred ccc--ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHH
Q 024797 152 YEV--HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIK 214 (262)
Q Consensus 152 ~~~--~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~ 214 (262)
.+. ++ ++++||+|++..... ..++.++.++|+|||.+++..++.+.+..
T Consensus 177 ~~~~~~~-----~~~~fD~V~~~~~~~---------~~~l~~~~~~LkpgG~lv~~~~~~~~~~~ 227 (336)
T 2b25_A 177 SGATEDI-----KSLTFDAVALDMLNP---------HVTLPVFYPHLKHGGVCAVYVVNITQVIE 227 (336)
T ss_dssp TCCC------------EEEEEECSSST---------TTTHHHHGGGEEEEEEEEEEESSHHHHHH
T ss_pred HHccccc-----CCCCeeEEEECCCCH---------HHHHHHHHHhcCCCcEEEEEeCCHHHHHH
Confidence 875 23 456899999864322 23789999999999999999988765443
No 167
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=4.7e-14 Score=116.13 Aligned_cols=123 Identities=15% Similarity=0.050 Sum_probs=86.8
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc--
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-- 158 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-- 158 (262)
..++.+|||+|||+|.++..++... ...++|+|+++.+++.|++++..... .++..++.++++|+.+.....
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~-----~~l~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDN-----AAFSARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGG-----TTTGGGEEEEECCTTCCHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhh-----CCCcceEEEEeCCHHHHhhhhhh
Confidence 3467799999999999998887653 45899999999999999998763000 122345999999998762100
Q ss_pred ccCCCCCeeEEEEcccccccC--------------CCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 159 VLADDAPFDICSCQFAMHYSW--------------STEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~--------------~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
...++++||+|+++..+.... ........+++.+.++|+|||.+++..+..
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 001467899999984332110 011225788999999999999999887654
No 168
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.53 E-value=8.5e-14 Score=114.10 Aligned_cols=127 Identities=13% Similarity=0.094 Sum_probs=89.9
Q ss_pred hHHHHHHHHHHHHhcc-CCCeEEEecCCC--CcchHHHHh--cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCC
Q 024797 68 KLNNWIKSVLVQLYAR-RGDVVLDLACGK--GGDLIKWDK--AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF 142 (262)
Q Consensus 68 ~~~~~~~~~l~~~~~~-~~~~vLDiGcG~--G~~~~~l~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~ 142 (262)
.-+.|+.+.+..+... ....|||+|||. +..+..+++ .+..+|+++|.|+.|++.|++++... ...
T Consensus 61 ~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~---------~~~ 131 (277)
T 3giw_A 61 ANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST---------PEG 131 (277)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC---------SSS
T ss_pred HHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC---------CCC
Confidence 3345666666655433 346899999997 445555544 35568999999999999999988631 123
Q ss_pred CeEEEeCccccccc--ccccCCCCCee-----EEEEcccccccCCCHH-HHHHHHHHHHhccCCCcEEEEEe
Q 024797 143 PARLICGDCYEVHL--DKVLADDAPFD-----ICSCQFAMHYSWSTEA-RARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 143 ~v~~~~~d~~~~~~--~~~~~~~~~fD-----~V~~~~~l~~~~~~~~-~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
++.++++|+.+... .... ..+.|| .|+++.++||+ +.. ++..+++++.+.|+|||+|+++.
T Consensus 132 ~~~~v~aD~~~~~~~l~~~~-~~~~~D~~~p~av~~~avLH~l--~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 132 RTAYVEADMLDPASILDAPE-LRDTLDLTRPVALTVIAIVHFV--LDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp EEEEEECCTTCHHHHHTCHH-HHTTCCTTSCCEEEEESCGGGS--CGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cEEEEEecccChhhhhcccc-cccccCcCCcchHHhhhhHhcC--CchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 58999999987531 0000 013344 57889999998 333 26889999999999999999985
No 169
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.53 E-value=4.7e-14 Score=114.08 Aligned_cols=107 Identities=20% Similarity=0.233 Sum_probs=84.9
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-ccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 159 (262)
..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++... +...++.++++|+.+. +..
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~~~-- 121 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL--------GLESRIELLFGDALQLGEKL-- 121 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT--------TCTTTEEEECSCGGGSHHHH--
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCcEEEEECCHHHHHHhc--
Confidence 457889999999999999888764 3568999999999999999987632 2234689999998764 220
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
..+++||+|++..... +...+++.+.++|+|||.+++..
T Consensus 122 -~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 122 -ELYPLFDVLFIDAAKG-------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp -TTSCCEEEEEEEGGGS-------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred -ccCCCccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 0147899999877653 35788999999999999999974
No 170
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.52 E-value=6.9e-14 Score=112.28 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=84.3
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcC--CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (262)
..++.+|||+|||+|..+..+++.. .++|+++|+++.+++.|++++... +...+++++++|+.+......
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~~~~ 127 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA--------NLNDRVEVRTGLALDSLQQIE 127 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEESCHHHHHHHHH
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCcEEEEEcCHHHHHHHHH
Confidence 3578899999999999999887642 468999999999999999988642 234469999999865321000
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
....++||+|++..... ....++.++.++|+|||.+++...
T Consensus 128 ~~~~~~fD~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 128 NEKYEPFDFIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp HTTCCCCSEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEESC
T ss_pred hcCCCCcCEEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 00126799999876543 356889999999999999998754
No 171
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.52 E-value=9e-14 Score=116.98 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=84.5
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|..+..+++. +..+|+++|+|+.+++.|++++..... .....+++++++|+..+... .
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~-----~~~~~~v~~~~~D~~~~~~~---~ 165 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR-----SLADPRATVRVGDGLAFVRQ---T 165 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG-----GGGCTTEEEEESCHHHHHHS---S
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc-----ccCCCcEEEEECcHHHHHHh---c
Confidence 56789999999999999988875 356899999999999999998731100 01135699999998776431 0
Q ss_pred CCCCeeEEEEcccccccCCCHHHH--HHHHHHHHhccCCCcEEEEEeCC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARA--RRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~--~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++++||+|++.....+. +.... ..+++++.++|+|||++++...+
T Consensus 166 ~~~~fDvIi~d~~~~~~--~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 166 PDNTYDVVIIDTTDPAG--PASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp CTTCEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCceeEEEECCCCccc--cchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 25789999997665432 11112 68899999999999999998765
No 172
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.52 E-value=5.9e-14 Score=115.13 Aligned_cols=102 Identities=25% Similarity=0.269 Sum_probs=82.1
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++.... +. .+++.++|+.+. +
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~--------~~--~v~~~~~d~~~~-~----- 180 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRN--------GV--RPRFLEGSLEAA-L----- 180 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHT--------TC--CCEEEESCHHHH-G-----
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHc--------CC--cEEEEECChhhc-C-----
Confidence 46788999999999999888876555 9999999999999999987621 11 278899998663 2
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++++||+|+++...+ ....++.++.++|+|||.++++..
T Consensus 181 ~~~~fD~Vv~n~~~~-------~~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 181 PFGPFDLLVANLYAE-------LHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp GGCCEEEEEEECCHH-------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCCCEEEECCcHH-------HHHHHHHHHHHHcCCCCEEEEEee
Confidence 357899999875443 357899999999999999998653
No 173
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.51 E-value=2.7e-14 Score=110.03 Aligned_cols=99 Identities=14% Similarity=0.114 Sum_probs=77.1
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..+++.. +|+|+|+|+.|++. .. +++++++|+.+ ++ +
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~----~~--------------~~~~~~~d~~~-~~-----~ 75 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES----HR--------------GGNLVRADLLC-SI-----N 75 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT----CS--------------SSCEEECSTTT-TB-----C
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc----cc--------------CCeEEECChhh-hc-----c
Confidence 467799999999999999887655 99999999999988 11 37899999977 34 4
Q ss_pred CCCeeEEEEcccccccCCC-----HHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 163 DAPFDICSCQFAMHYSWST-----EARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~-----~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+++||+|+++..+++..+. ..+...++.++.+.| |||.+++..+.
T Consensus 76 ~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 76 QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 5899999998887753111 113356788888888 99999987653
No 174
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.51 E-value=3.5e-14 Score=117.81 Aligned_cols=109 Identities=10% Similarity=0.075 Sum_probs=78.1
Q ss_pred HHHHHHHhcc-CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeE-EEeCcc
Q 024797 74 KSVLVQLYAR-RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPAR-LICGDC 151 (262)
Q Consensus 74 ~~~l~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~-~~~~d~ 151 (262)
..++..+... ++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.+.+... ++. +...++
T Consensus 74 ~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~--------------rv~~~~~~ni 139 (291)
T 3hp7_A 74 EKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDD--------------RVRSMEQYNF 139 (291)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCT--------------TEEEECSCCG
T ss_pred HHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCc--------------ccceecccCc
Confidence 3444444443 567999999999999998887777799999999999998654321 122 223344
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
..+....+ +..+||+|++..+++++ ..+|.+++++|+|||.+++.
T Consensus 140 ~~l~~~~l--~~~~fD~v~~d~sf~sl-------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 140 RYAEPVDF--TEGLPSFASIDVSFISL-------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GGCCGGGC--TTCCCSEEEECCSSSCG-------GGTHHHHHHHSCTTCEEEEE
T ss_pred eecchhhC--CCCCCCEEEEEeeHhhH-------HHHHHHHHHHcCcCCEEEEE
Confidence 33332111 34469999998888754 67999999999999999886
No 175
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.51 E-value=4.1e-14 Score=114.00 Aligned_cols=117 Identities=20% Similarity=0.172 Sum_probs=86.5
Q ss_pred HHHHHHHH--hccCCCeEEEecCCCCcchHHHHhc-C------CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCC
Q 024797 73 IKSVLVQL--YARRGDVVLDLACGKGGDLIKWDKA-K------IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFP 143 (262)
Q Consensus 73 ~~~~l~~~--~~~~~~~vLDiGcG~G~~~~~l~~~-~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 143 (262)
...++..+ ...++.+|||+|||+|.++..+++. + .++|+++|+++.+++.|++++...+... ....+
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~~~~~ 146 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM----LDSGQ 146 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH----HHHTS
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccc----cCCCc
Confidence 33444444 3567889999999999998888763 2 2589999999999999998875321000 00135
Q ss_pred eEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 144 ARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 144 v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+.+.++|+.. .+. ..++||+|++..+++++. .++.+.|+|||++++.+..
T Consensus 147 v~~~~~d~~~-~~~----~~~~fD~I~~~~~~~~~~----------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 147 LLIVEGDGRK-GYP----PNAPYNAIHVGAAAPDTP----------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEESCGGG-CCG----GGCSEEEEEECSCBSSCC----------HHHHHTEEEEEEEEEEESC
T ss_pred eEEEECCccc-CCC----cCCCccEEEECCchHHHH----------HHHHHHhcCCCEEEEEEec
Confidence 8999999876 231 237899999999998761 6789999999999998764
No 176
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.51 E-value=9.1e-14 Score=118.22 Aligned_cols=115 Identities=17% Similarity=0.091 Sum_probs=84.8
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCC-CeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF-PARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|.++..++..+. +|+++|+|+.+++.|++++... ++.. ++.++++|+.++... ...
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~--------gl~~~~v~~i~~D~~~~l~~-~~~ 221 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLA--------GLEQAPIRWICEDAMKFIQR-EER 221 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHH--------TCTTSCEEEECSCHHHHHHH-HHH
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHc--------CCCccceEEEECcHHHHHHH-HHh
Confidence 4678999999999999999887655 8999999999999999987632 2222 489999998775320 000
Q ss_pred CCCCeeEEEEcccccc------cCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 162 DDAPFDICSCQFAMHY------SWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~------~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
..++||+|+++..... .+....+...++..+.++|+|||.+++.+.
T Consensus 222 ~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 222 RGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp HTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred cCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 1468999999543110 011236778999999999999999777653
No 177
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.51 E-value=6.2e-14 Score=112.65 Aligned_cols=110 Identities=17% Similarity=0.090 Sum_probs=83.7
Q ss_pred cCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc-cccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-LDKV 159 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~ 159 (262)
.++.+|||+|||+|..+..++.. ...+|+++|+++.+++.|++++... +...+++++++|+.+.. ....
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~~~~~ 134 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA--------GLSDKIGLRLSPAKDTLAELIH 134 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEESCHHHHHHHHHT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC--------CCCCceEEEeCCHHHHHHHhhh
Confidence 46789999999999999988764 2568999999999999999988643 23346999999986542 1000
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
....++||+|++.... .....++.++.++|+|||++++...
T Consensus 135 ~~~~~~fD~v~~~~~~-------~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 135 AGQAWQYDLIYIDADK-------ANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp TTCTTCEEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccCCCCccEEEECCCH-------HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 0011789999976643 3457799999999999999998753
No 178
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.51 E-value=8.8e-14 Score=111.98 Aligned_cols=106 Identities=17% Similarity=0.141 Sum_probs=81.9
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (262)
..++.+|||+|||+|.++..+++. +.++|+|+|+|+.|++.++++... ..++.++++|+.+......
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-----------~~~v~~~~~d~~~~~~~~~ 139 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-----------RRNIVPILGDATKPEEYRA 139 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-----------CTTEEEEECCTTCGGGGTT
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-----------cCCCEEEEccCCCcchhhc
Confidence 457889999999999999988764 346899999999999999988762 1469999999876421100
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
..++||+|++.... ......++.++.++|+|||.+++.+
T Consensus 140 --~~~~~D~v~~~~~~------~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 140 --LVPKVDVIFEDVAQ------PTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp --TCCCEEEEEECCCS------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --ccCCceEEEECCCC------HhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 24589999976542 1334556999999999999998875
No 179
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.50 E-value=3.8e-14 Score=109.04 Aligned_cols=103 Identities=19% Similarity=0.231 Sum_probs=80.1
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc----
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH---- 155 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---- 155 (262)
..++.+|||+|||+|.++..+++. ...+++|+|+|+ +++. .++.+.++|+.+.+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-------------------~~~~~~~~d~~~~~~~~~ 79 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-------------------VGVDFLQGDFRDELVMKA 79 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------------------TTEEEEESCTTSHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------------------CcEEEEEcccccchhhhh
Confidence 467889999999999999988765 336899999999 6532 24889999998765
Q ss_pred ----cccccCCCCCeeEEEEcccccccCCCHHH-------HHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 156 ----LDKVLADDAPFDICSCQFAMHYSWSTEAR-------ARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 156 ----~~~~~~~~~~fD~V~~~~~l~~~~~~~~~-------~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
+ ++++||+|+++..+++......+ ...+++++.++|+|||.+++.++..
T Consensus 80 ~~~~~-----~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 80 LLERV-----GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHHHH-----TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred hhccC-----CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 3 56789999998887765211111 1688999999999999999987643
No 180
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.50 E-value=7.1e-13 Score=105.03 Aligned_cols=106 Identities=13% Similarity=0.079 Sum_probs=82.1
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..++..+...++|+|+|+.+++.++++.... +.+++++++|+.+++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~----------~~~~~~~~~d~~~~~------ 110 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEF----------KGKFKVFIGDVSEFN------ 110 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG----------TTSEEEEESCGGGCC------
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc----------CCCEEEEECchHHcC------
Confidence 4578899999999999999887765668999999999999999987632 116899999988753
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
++||+|+++..+++. .......+++++.+++ ||.+++.+++.
T Consensus 111 --~~~D~v~~~~p~~~~--~~~~~~~~l~~~~~~l--~~~~~~~~~~~ 152 (207)
T 1wy7_A 111 --SRVDIVIMNPPFGSQ--RKHADRPFLLKAFEIS--DVVYSIHLAKP 152 (207)
T ss_dssp --CCCSEEEECCCCSSS--STTTTHHHHHHHHHHC--SEEEEEEECCH
T ss_pred --CCCCEEEEcCCCccc--cCCchHHHHHHHHHhc--CcEEEEEeCCc
Confidence 479999999877654 2223456788888888 66666654444
No 181
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.50 E-value=2.7e-13 Score=108.62 Aligned_cols=121 Identities=9% Similarity=0.014 Sum_probs=91.9
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.|++++... ++..++++.++|+.+...
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~--------gl~~~I~~~~gD~l~~~~---- 86 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH--------GLTSKIDVRLANGLSAFE---- 86 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT--------TCTTTEEEEECSGGGGCC----
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCcEEEEECchhhccc----
Confidence 4678899999999999999887754 457999999999999999998743 345579999999877643
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHHHHhhhcC
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEG 221 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~~~~~~~~ 221 (262)
+.++||+|++.+..- +....++....+.|+++|.|+++-......+..+....+
T Consensus 87 -~~~~~D~IviaGmGg------~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~~~G 140 (230)
T 3lec_A 87 -EADNIDTITICGMGG------RLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLAAND 140 (230)
T ss_dssp -GGGCCCEEEEEEECH------HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred -cccccCEEEEeCCch------HHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHHHCC
Confidence 334799988655432 457888999999999999999886544433444433333
No 182
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.50 E-value=1.1e-13 Score=118.73 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=82.7
Q ss_pred HHHHhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 77 LVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 77 l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
+......++.+|||||||+|..+..+++. +..+++++|++ .++. +++.. ......+++++++|+. .+
T Consensus 177 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~--------~~~~~~~v~~~~~d~~-~~ 244 (348)
T 3lst_A 177 ARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLD--------APDVAGRWKVVEGDFL-RE 244 (348)
T ss_dssp HHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCC--------CGGGTTSEEEEECCTT-TC
T ss_pred HHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--ccccc--------ccCCCCCeEEEecCCC-CC
Confidence 33333456789999999999999988774 44479999994 4444 22222 1123457999999987 33
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
. + +||+|++..++||+ +.++...++++++++|+|||++++..
T Consensus 245 ~-----p--~~D~v~~~~vlh~~--~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 245 V-----P--HADVHVLKRILHNW--GDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp C-----C--CCSEEEEESCGGGS--CHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred C-----C--CCcEEEEehhccCC--CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3 4 89999999999998 66667899999999999999998865
No 183
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.50 E-value=1.9e-13 Score=113.76 Aligned_cols=117 Identities=14% Similarity=0.073 Sum_probs=83.4
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeC-ChhHHHHHHHHhccCccccccccCCC----CCeEEEeCcccccc-
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDI-AEGSIEDCRTRYNGDADHHQRRKKFS----FPARLICGDCYEVH- 155 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~----~~v~~~~~d~~~~~- 155 (262)
..++.+|||+|||+|.++..+++.+..+|+|+|+ |+.+++.|+++....... ..+.. .++.+...+..+..
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~---~~~~~~~~~~~v~~~~~~~~~~~~ 153 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTAN---SCSSETVKRASPKVVPYRWGDSPD 153 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC-------------CCCEEEECCTTSCTH
T ss_pred hcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhh---hcccccCCCCCeEEEEecCCCccH
Confidence 3567899999999999988887766568999999 899999999987310000 01111 35777766644321
Q ss_pred -cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccC---C--CcEEEEEe
Q 024797 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLR---P--GGTFIGTM 206 (262)
Q Consensus 156 -~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~---~--gG~li~~~ 206 (262)
+.... +.++||+|++..+++|. .+...+++.+.++|+ | ||.+++..
T Consensus 154 ~~~~~~-~~~~fD~Ii~~dvl~~~----~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 154 SLQRCT-GLQRFQVVLLADLLSFH----QAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHHHHH-SCSSBSEEEEESCCSCG----GGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred HHHhhc-cCCCCCEEEEeCcccCh----HHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 10000 25789999998888876 678899999999999 9 99876654
No 184
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.50 E-value=2.3e-14 Score=116.75 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=84.1
Q ss_pred cCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
.++.+|||+|||+|..+..+++. ..++|+++|+++.+++.|++++... +...+++++++|+.+.... ..
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--------g~~~~i~~~~gda~~~l~~-~~ 129 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA--------KQEHKIKLRLGPALDTLHS-LL 129 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT--------TCTTTEEEEESCHHHHHHH-HH
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCcEEEEEcCHHHHHHH-Hh
Confidence 46789999999999999988773 3568999999999999999988743 3345799999998664210 00
Q ss_pred --CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 161 --ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 161 --~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
...++||+|++.... .....+++++.++|+|||++++..
T Consensus 130 ~~~~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 130 NEGGEHQFDFIFIDADK-------TNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp HHHCSSCEEEEEEESCG-------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hccCCCCEeEEEEcCCh-------HHhHHHHHHHHHhcCCCeEEEEEC
Confidence 014789999987653 345678999999999999999863
No 185
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.50 E-value=1.4e-13 Score=116.35 Aligned_cols=114 Identities=19% Similarity=0.254 Sum_probs=85.9
Q ss_pred HhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (262)
+...++.+|||+|||+|..+..++.. ..+.|+|+|+|+.+++.+++++...+. .++.++++|+..++.
T Consensus 114 l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~---------~~v~~~~~D~~~~~~- 183 (315)
T 1ixk_A 114 LDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV---------LNVILFHSSSLHIGE- 183 (315)
T ss_dssp HCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC---------CSEEEESSCGGGGGG-
T ss_pred hCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC---------CeEEEEECChhhccc-
Confidence 34568889999999999999988764 346899999999999999998863221 258999999988754
Q ss_pred cccCCCCCeeEEEEccc------ccccCC-----CH-------HHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 158 KVLADDAPFDICSCQFA------MHYSWS-----TE-------ARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~------l~~~~~-----~~-------~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
..++||+|++... +.+..+ +. ..+..++.++.++|||||.+++++.
T Consensus 184 ----~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 184 ----LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp ----GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ----ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 3568999998532 221100 11 1236899999999999999999764
No 186
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.49 E-value=1.2e-13 Score=115.17 Aligned_cols=122 Identities=12% Similarity=0.075 Sum_probs=87.5
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
+..++..+...++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|+++.... +...+++++++|+.
T Consensus 112 v~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~--------~l~~~v~~~~~D~~ 183 (284)
T 1nv8_A 112 VELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERH--------GVSDRFFVRKGEFL 183 (284)
T ss_dssp HHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHT--------TCTTSEEEEESSTT
T ss_pred HHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCceEEEECcch
Confidence 3344444433467899999999999999887664558999999999999999988632 22335999999987
Q ss_pred ccccccccCCCCCe---eEEEEccccccc---------CCCH------HHHHHHHHHHH-hccCCCcEEEEEeCCh
Q 024797 153 EVHLDKVLADDAPF---DICSCQFAMHYS---------WSTE------ARARRALANVS-ALLRPGGTFIGTMPDA 209 (262)
Q Consensus 153 ~~~~~~~~~~~~~f---D~V~~~~~l~~~---------~~~~------~~~~~~l~~~~-~~L~~gG~li~~~~~~ 209 (262)
+. . .++| |+|+++...... +.+. .+...+++++. +.|+|||.+++.+...
T Consensus 184 ~~-~------~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 184 EP-F------KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp GG-G------GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred hh-c------ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 73 2 2468 999997322100 0111 11236899999 9999999999987654
No 187
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=5e-14 Score=114.30 Aligned_cols=99 Identities=18% Similarity=0.148 Sum_probs=77.6
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-----CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc---
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-----KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV--- 154 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~--- 154 (262)
.++.+|||||||+|..+..+++. +.++|+|+|+|+.|++.|+.. ..+++++++|+.+.
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~--------------~~~v~~~~gD~~~~~~l 145 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD--------------MENITLHQGDCSDLTTF 145 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG--------------CTTEEEEECCSSCSGGG
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc--------------CCceEEEECcchhHHHH
Confidence 35689999999999999988764 356899999999998887621 23599999999874
Q ss_pred ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHh-ccCCCcEEEEEe
Q 024797 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSA-LLRPGGTFIGTM 206 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~-~L~~gG~li~~~ 206 (262)
+.. ...+||+|++... |. +...++.++.+ +|+|||++++..
T Consensus 146 ~~~----~~~~fD~I~~d~~--~~-----~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 146 EHL----REMAHPLIFIDNA--HA-----NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp GGG----SSSCSSEEEEESS--CS-----SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred Hhh----ccCCCCEEEECCc--hH-----hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 321 2347999998765 22 35678999997 999999999964
No 188
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.49 E-value=1.4e-13 Score=114.33 Aligned_cols=113 Identities=17% Similarity=0.191 Sum_probs=89.6
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhc-C-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (262)
++..+...++.+|||+|||+|.++..+++. . ..+++++|+|+.+++.|++++...+ ...++.+.++|+.+
T Consensus 104 i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--------~~~~v~~~~~d~~~ 175 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG--------LIERVTIKVRDISE 175 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT--------CGGGEEEECCCGGG
T ss_pred HHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC--------CCCCEEEEECCHHH
Confidence 444455678889999999999999988775 3 5689999999999999999876322 22468999999877
Q ss_pred cccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 154 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
. + ++++||+|++.. .++..++.++.++|+|||.+++.++..+.
T Consensus 176 ~-~-----~~~~~D~V~~~~---------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 218 (277)
T 1o54_A 176 G-F-----DEKDVDALFLDV---------PDPWNYIDKCWEALKGGGRFATVCPTTNQ 218 (277)
T ss_dssp C-C-----SCCSEEEEEECC---------SCGGGTHHHHHHHEEEEEEEEEEESSHHH
T ss_pred c-c-----cCCccCEEEECC---------cCHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 5 3 467899999843 23457889999999999999999987643
No 189
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.49 E-value=4.4e-13 Score=108.25 Aligned_cols=121 Identities=11% Similarity=0.045 Sum_probs=91.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.|++++... ++..++++.++|+.+...
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--------gl~~~I~v~~gD~l~~~~---- 86 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS--------GLTEQIDVRKGNGLAVIE---- 86 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--------TCTTTEEEEECSGGGGCC----
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCceEEEEecchhhccC----
Confidence 4678899999999999999887754 457999999999999999998743 334569999999877542
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHHHHhhhcC
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEG 221 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~~~~~~~~ 221 (262)
+..+||+|++.+..- +....++....+.|+++|+||+.-.........+....+
T Consensus 87 -~~~~~D~IviagmGg------~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~~G 140 (244)
T 3gnl_A 87 -KKDAIDTIVIAGMGG------TLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNN 140 (244)
T ss_dssp -GGGCCCEEEEEEECH------HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHHT
T ss_pred -ccccccEEEEeCCch------HHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHHHCC
Confidence 233699998755332 457889999999999999999886544333333333334
No 190
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.49 E-value=1.5e-13 Score=108.49 Aligned_cols=107 Identities=18% Similarity=0.174 Sum_probs=76.1
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-C--CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-K--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
..++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+ . ..++.++++|+.+.+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~------------~~~v~~~~~d~~~~~~~~ 79 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------P------------IPNVYFIQGEIGKDNMNN 79 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------C------------CTTCEEEECCTTTTSSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------C------------CCCceEEEccccchhhhh
Confidence 357789999999999999988764 3 4689999999831 1 124888999987765000
Q ss_pred ------------------c--cCCCCCeeEEEEcccccccCCCHHH-------HHHHHHHHHhccCCCcEEEEEeCC
Q 024797 159 ------------------V--LADDAPFDICSCQFAMHYSWSTEAR-------ARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 159 ------------------~--~~~~~~fD~V~~~~~l~~~~~~~~~-------~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
. ..++++||+|++..++++.-....+ ...++.++.++|+|||.+++.+..
T Consensus 80 ~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 80 IKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp C-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 0 0145789999998877653100112 234889999999999999987754
No 191
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.48 E-value=4e-13 Score=107.46 Aligned_cols=121 Identities=10% Similarity=0.043 Sum_probs=89.5
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|.++..++... ..+|+++|+++.+++.|++++... ++..++++.++|..+.-.
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--------gl~~~i~~~~~d~l~~l~---- 80 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH--------GLKEKIQVRLANGLAAFE---- 80 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--------TCTTTEEEEECSGGGGCC----
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCceEEEEECchhhhcc----
Confidence 4578899999999999999888754 557999999999999999998743 334569999999854211
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHHHHhhhcC
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEG 221 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~~~~~~~~ 221 (262)
+..+||+|++.+.-- +....++....+.|+++|++++.-.........+....+
T Consensus 81 -~~~~~D~IviaG~Gg------~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~~G 134 (225)
T 3kr9_A 81 -ETDQVSVITIAGMGG------RLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHG 134 (225)
T ss_dssp -GGGCCCEEEEEEECH------HHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred -cCcCCCEEEEcCCCh------HHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHHCC
Confidence 123699998755332 447889999999999999999876544333333333333
No 192
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.48 E-value=1.7e-13 Score=118.19 Aligned_cols=99 Identities=14% Similarity=0.154 Sum_probs=82.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..+..+|||||||+|..+..+++. +..+++++|+ +.+++.|++. .+++++.+|+.+ ++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------------~~v~~~~~D~~~-~~---- 257 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF---------------PGVTHVGGDMFK-EV---- 257 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---------------TTEEEEECCTTT-CC----
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc---------------CCeEEEeCCcCC-CC----
Confidence 345689999999999999988764 4557999999 8787766532 359999999987 55
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+.+ |+|++..++|++ +.++..++|++++++|+|||++++..
T Consensus 258 -p~~--D~v~~~~vlh~~--~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 258 -PSG--DTILMKWILHDW--SDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp -CCC--SEEEEESCGGGS--CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred -CCC--CEEEehHHhccC--CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 443 999999999988 77788999999999999999998864
No 193
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.48 E-value=1.3e-13 Score=119.15 Aligned_cols=98 Identities=16% Similarity=0.160 Sum_probs=81.2
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.+..+|||||||+|..+..+++. +..+++++|+ +.+++.+++. .+++++.+|+.+ ++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------------~~v~~~~~d~~~-~~----- 259 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF---------------SGVEHLGGDMFD-GV----- 259 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---------------TTEEEEECCTTT-CC-----
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc---------------CCCEEEecCCCC-CC-----
Confidence 45679999999999999988774 4557999999 8888766532 359999999986 54
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+.+ |+|++..++|++ +.++..++|++++++|+|||++++..
T Consensus 260 p~~--D~v~~~~vlh~~--~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 260 PKG--DAIFIKWICHDW--SDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp CCC--SEEEEESCGGGB--CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCC--CEEEEechhhcC--CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 433 999999999988 77778899999999999999998864
No 194
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.48 E-value=9.4e-14 Score=115.21 Aligned_cols=117 Identities=16% Similarity=0.203 Sum_probs=85.6
Q ss_pred hccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 81 YARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
...++.+|||+|||+|..+..++.. +.+.|+|+|+|+.+++.+++++...+. .++.++++|+..++...
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~---------~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV---------LNTIIINADMRKYKDYL 150 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC---------CSEEEEESCHHHHHHHH
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC---------CcEEEEeCChHhcchhh
Confidence 4567889999999999999988763 346899999999999999998864322 25999999987764310
Q ss_pred ccCCCCCeeEEEEccccccc--CC-----CH-------HHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 159 VLADDAPFDICSCQFAMHYS--WS-----TE-------ARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~--~~-----~~-------~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
. ...++||+|++....... +. +. ..+..++.++.++|+|||.+++++.
T Consensus 151 ~-~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 151 L-KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp H-HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred h-hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 0 015689999987322110 00 00 2347889999999999999999764
No 195
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.48 E-value=1.8e-13 Score=118.80 Aligned_cols=118 Identities=14% Similarity=0.144 Sum_probs=88.7
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCC-CeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF-PARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|++++... +... +++++++|+.+... ....
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n--------~~~~~~v~~~~~D~~~~l~-~~~~ 281 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEAN--------HLDMANHQLVVMDVFDYFK-YARR 281 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHT--------TCCCTTEEEEESCHHHHHH-HHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCccceEEEECCHHHHHH-HHHH
Confidence 467899999999999999988766668999999999999999988632 2233 69999999876321 0000
Q ss_pred CCCCeeEEEEcccc-----cccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 162 DDAPFDICSCQFAM-----HYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 162 ~~~~fD~V~~~~~l-----~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
...+||+|++.... .+..........++..+.++|+|||.+++++...
T Consensus 282 ~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 282 HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 24589999986433 2232334667788999999999999999987543
No 196
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.47 E-value=7.8e-14 Score=127.01 Aligned_cols=105 Identities=22% Similarity=0.261 Sum_probs=81.0
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
..+.+|||||||+|.++..+++.+. .|+|||+|+.+++.|+.++.+.+ ..++++.++++.++... .+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~---------~~~~~~~~~~~~~~~~~---~~ 131 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENP---------DFAAEFRVGRIEEVIAA---LE 131 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTST---------TSEEEEEECCHHHHHHH---CC
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcC---------CCceEEEECCHHHHhhh---cc
Confidence 4678999999999999998887655 89999999999999999876432 23589999999887320 14
Q ss_pred CCCeeEEEEcccccccCCCHHHHH--HHHHHHHhccCCCcEEEE
Q 024797 163 DAPFDICSCQFAMHYSWSTEARAR--RALANVSALLRPGGTFIG 204 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~--~~l~~~~~~L~~gG~li~ 204 (262)
+++||+|+|..+++|+ .++. ..+..+.+.|+++|..++
T Consensus 132 ~~~fD~v~~~e~~ehv----~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 132 EGEFDLAIGLSVFHHI----VHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp TTSCSEEEEESCHHHH----HHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred CCCccEEEECcchhcC----CCHHHHHHHHHHHHHhccccceee
Confidence 6789999999999998 3333 334567777877776443
No 197
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.47 E-value=2e-13 Score=108.65 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=81.3
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-C-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-ccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKV 159 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 159 (262)
.++.+|||+|||+|..+..+++. + ..+|+++|+|+.+++.|++++... +...+++++++|+.+. +.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~~--- 123 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN--------GLIDRVELQVGDPLGIAAG--- 123 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--------SGGGGEEEEESCHHHHHTT---
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--------CCCceEEEEEecHHHHhcc---
Confidence 46789999999999999888764 2 568999999999999999987632 2234589999998664 32
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
.++ ||+|++.... .+...+++++.++|+|||.+++..
T Consensus 124 --~~~-fD~v~~~~~~-------~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 124 --QRD-IDILFMDCDV-------FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp --CCS-EEEEEEETTT-------SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred --CCC-CCEEEEcCCh-------hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 245 9999987532 345788999999999999999854
No 198
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.47 E-value=1.4e-13 Score=119.15 Aligned_cols=97 Identities=18% Similarity=0.189 Sum_probs=80.4
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++. .+++++++|+.+ ++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---------------~~v~~~~~d~~~-~~----- 265 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL---------------SGIEHVGGDMFA-SV----- 265 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---------------TTEEEEECCTTT-CC-----
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc---------------CCCEEEeCCccc-CC-----
Confidence 45689999999999999988774 3457999999 8888776541 248999999977 54
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
+. ||+|++..++||+ +.+....++++++++|+|||++++.
T Consensus 266 ~~--~D~v~~~~~lh~~--~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 266 PQ--GDAMILKAVCHNW--SDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp CC--EEEEEEESSGGGS--CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC--CCEEEEecccccC--CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 33 9999999999998 5566679999999999999999886
No 199
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.47 E-value=2.1e-13 Score=114.36 Aligned_cols=110 Identities=10% Similarity=0.009 Sum_probs=82.8
Q ss_pred CeEEEecCCCCcchHHHHh-cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCC
Q 024797 86 DVVLDLACGKGGDLIKWDK-AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (262)
Q Consensus 86 ~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (262)
.+|||||||+|.++..+++ .+..++++||+++.+++.|++++.. ....+++++++|+..+... .+++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~---------~~~~rv~v~~~Da~~~l~~---~~~~ 158 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI---------PRAPRVKIRVDDARMVAES---FTPA 158 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC---------CCTTTEEEEESCHHHHHHT---CCTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc---------cCCCceEEEECcHHHHHhh---ccCC
Confidence 4999999999999999887 4555899999999999999998762 1245799999998765210 0357
Q ss_pred CeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 165 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
+||+|++....+......-....+++.++++|+|||++++...
T Consensus 159 ~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 159 SRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 8999998754332100000126799999999999999998775
No 200
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.47 E-value=1.4e-13 Score=114.54 Aligned_cols=118 Identities=15% Similarity=0.128 Sum_probs=84.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccC--ccccccccCCCCCeEEEeCcccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGD--ADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (262)
..++.+|||+|||+|..+..+++.+..+++++|+++.+++.|++++ .. +...........+++++++|+.+...
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~--- 148 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK--- 148 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH---
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc---
Confidence 3467899999999999999887765568999999999999999987 32 10000000013569999999866421
Q ss_pred cCCCCCeeEEEEcccccccCCCHHH--HHHHHHHHHhccCCCcEEEEEeC
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEAR--ARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~--~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.+++||+|++....+.. .... ...+++.+.++|+|||.+++...
T Consensus 149 --~~~~fD~Ii~d~~~~~~--~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 149 --NNRGFDVIIADSTDPVG--PAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp --HCCCEEEEEEECCCCC-------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --ccCCeeEEEECCCCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 14689999987654321 1122 26789999999999999998754
No 201
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.47 E-value=2.1e-13 Score=110.69 Aligned_cols=110 Identities=15% Similarity=0.147 Sum_probs=83.7
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcC--CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-c-cc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-H-LD 157 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~-~~ 157 (262)
..++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.|++++...+ ...++.+.++|+.+. + +.
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--------~~~~v~~~~~d~~~~~~~~~ 129 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG--------LENKIFLKLGSALETLQVLI 129 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--------CGGGEEEEESCHHHHHHHHH
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--------CCCCEEEEECCHHHHHHHHH
Confidence 4578899999999999999887752 5689999999999999999876322 223589999998652 1 10
Q ss_pred --------cccCCC--CCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 158 --------KVLADD--APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 158 --------~~~~~~--~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
...+++ ++||+|++..... ....++.++.++|+|||++++..
T Consensus 130 ~~~~~~~~~~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 130 DSKSAPSWASDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HCSSCCGGGTTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hhcccccccccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 000122 7899999886543 34678999999999999999975
No 202
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.46 E-value=6.9e-13 Score=114.69 Aligned_cols=121 Identities=15% Similarity=0.159 Sum_probs=91.1
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCC-CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|.++..++.... +.++|+|+|+.|++.|++++... ++..++++.++|+.+++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~--------gl~~~i~~~~~D~~~~~~---- 282 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA--------GVLDKIKFIQGDATQLSQ---- 282 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--------TCGGGCEEEECCGGGGGG----
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--------CCCCceEEEECChhhCCc----
Confidence 56788999999999999998876443 48999999999999999998743 223469999999999876
Q ss_pred CCCCCeeEEEEcccccccCC---CHH-HHHHHHHHHHhccCCCcEEEEEeCChHHHHHHHh
Q 024797 161 ADDAPFDICSCQFAMHYSWS---TEA-RARRALANVSALLRPGGTFIGTMPDANVIIKKLR 217 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~---~~~-~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~~~~ 217 (262)
++++||+|+++..+...+. ... ....+++++.++| ||.+++.+++...+.+.+.
T Consensus 283 -~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~~~~~~~ 340 (373)
T 3tm4_A 283 -YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKAIEEAIA 340 (373)
T ss_dssp -TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHHHHHHHH
T ss_pred -ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHH
Confidence 5689999999765432211 112 2377889999999 6777777788776655443
No 203
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=2e-13 Score=113.14 Aligned_cols=103 Identities=16% Similarity=0.077 Sum_probs=84.1
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...+ ..++.++++|+.+.+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~---------l~~~~~~~~d~~~~~----- 182 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK---------LNNVIPILADNRDVE----- 182 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT---------CSSEEEEESCGGGCC-----
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---------CCCEEEEECChHHcC-----
Confidence 467889999999999999998875 45689999999999999999886322 235889999998763
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
..++||+|++.... ....++.++.+.|+|||.+++++.
T Consensus 183 -~~~~~D~Vi~d~p~--------~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 183 -LKDVADRVIMGYVH--------KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp -CTTCEEEEEECCCS--------SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -ccCCceEEEECCcc--------cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 25689999987654 245688999999999999998764
No 204
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.46 E-value=2.2e-13 Score=111.28 Aligned_cols=109 Identities=12% Similarity=0.039 Sum_probs=83.3
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-C-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-ccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKV 159 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 159 (262)
.++.+|||+|||+|..+..+++. + .++++++|+|+.+++.|++++... +...+++++++|+.+. +....
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--------g~~~~i~~~~gda~~~l~~l~~ 149 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA--------GVDHKIDFREGPALPVLDEMIK 149 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT--------TCGGGEEEEESCHHHHHHHHHH
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCCeEEEECCHHHHHHHHHh
Confidence 46789999999999999888764 2 568999999999999999988743 2234699999998654 21000
Q ss_pred c-CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 160 L-ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 160 ~-~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
. .+.++||+|++.... .+...+++++.++|+|||++++..
T Consensus 150 ~~~~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 150 DEKNHGSYDFIFVDADK-------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SGGGTTCBSEEEECSCS-------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred ccCCCCCEEEEEEcCch-------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 0 014789999987643 345788999999999999999864
No 205
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.45 E-value=5.1e-14 Score=116.02 Aligned_cols=114 Identities=12% Similarity=0.063 Sum_probs=78.0
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEE--eCcccc
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI--CGDCYE 153 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~--~~d~~~ 153 (262)
++......++.+|||+|||+|.++..+++. ++|+|+|+++ |+..+++... . ......++.++ ++|+..
T Consensus 66 i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~----~---~~~~~~~v~~~~~~~D~~~ 135 (265)
T 2oxt_A 66 MEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPR----I---TESYGWNIVKFKSRVDIHT 135 (265)
T ss_dssp HHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCC----C---CCBTTGGGEEEECSCCTTT
T ss_pred HHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhh----h---hhccCCCeEEEecccCHhH
Confidence 333333467889999999999999888765 6899999998 5332221100 0 01112368889 999987
Q ss_pred cccccccCCCCCeeEEEEcccccccCCCH-HH-H--HHHHHHHHhccCCCc--EEEEEeCC
Q 024797 154 VHLDKVLADDAPFDICSCQFAMHYSWSTE-AR-A--RRALANVSALLRPGG--TFIGTMPD 208 (262)
Q Consensus 154 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~-~~-~--~~~l~~~~~~L~~gG--~li~~~~~ 208 (262)
++ +++||+|+|..+ ++. ... .+ . ..++..+.++|+||| .+++.+..
T Consensus 136 l~-------~~~fD~V~sd~~-~~~-~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 136 LP-------VERTDVIMCDVG-ESS-PKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp SC-------CCCCSEEEECCC-CCC-SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CC-------CCCCcEEEEeCc-ccC-CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 53 578999999877 432 111 11 1 138899999999999 99987743
No 206
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.45 E-value=2.8e-13 Score=112.32 Aligned_cols=117 Identities=15% Similarity=0.135 Sum_probs=85.2
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..+.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++...+. .....+++++++|+...-..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~-----~~~~~rv~v~~~D~~~~l~~---- 144 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAG-----KLDDPRVDVQVDDGFMHIAK---- 144 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHT-----TTTSTTEEEEESCSHHHHHT----
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcc-----ccCCCceEEEECcHHHHHhh----
Confidence 45789999999999999988775 456899999999999999998742100 00135799999998764211
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
.+++||+|++....+......-....+++.+.++|+|||.+++...+
T Consensus 145 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 145 SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 35789999997644321000001257899999999999999998754
No 207
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.45 E-value=5e-14 Score=116.69 Aligned_cols=109 Identities=13% Similarity=0.091 Sum_probs=75.8
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEE--eCcccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI--CGDCYEVHLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~--~~d~~~~~~~~~ 159 (262)
..++.+|||+|||+|.++..+++. ++|+|+|+|+ |+..+++... . ......++.++ ++|+..++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~----~---~~~~~~~v~~~~~~~D~~~l~---- 145 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPR----L---VETFGWNLITFKSKVDVTKME---- 145 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCC----C---CCCTTGGGEEEECSCCGGGCC----
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchh----h---hhhcCCCeEEEeccCcHhhCC----
Confidence 457889999999999999888765 6899999999 6433322110 0 01122368899 99988753
Q ss_pred cCCCCCeeEEEEcccccccCCCH-HHH--HHHHHHHHhccCCCc--EEEEEeCC
Q 024797 160 LADDAPFDICSCQFAMHYSWSTE-ARA--RRALANVSALLRPGG--TFIGTMPD 208 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~-~~~--~~~l~~~~~~L~~gG--~li~~~~~ 208 (262)
+++||+|++..+ ++..... +.. ..++..+.++|+||| .+++.+..
T Consensus 146 ---~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 ---PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp ---CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred ---CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 578999999877 4321111 111 137899999999999 99887643
No 208
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.45 E-value=3.4e-13 Score=112.31 Aligned_cols=116 Identities=13% Similarity=0.117 Sum_probs=86.5
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++...+.. ....+++++++|+.+....
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~-----~~~~~v~~~~~D~~~~l~~--- 147 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCG-----YEDKRVNVFIEDASKFLEN--- 147 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGG-----GGSTTEEEEESCHHHHHHH---
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccc-----cCCCcEEEEECChHHHHHh---
Confidence 346789999999999999988765 3568999999999999999987632100 0135699999998764211
Q ss_pred CCCCCeeEEEEcccccccCCCHHHH--HHHHHHHHhccCCCcEEEEEeCC
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARA--RRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~--~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
..++||+|++....++. ..... ..+++.+.++|+|||.+++...+
T Consensus 148 -~~~~fD~Ii~d~~~~~~--~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 148 -VTNTYDVIIVDSSDPIG--PAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp -CCSCEEEEEEECCCTTT--GGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred -CCCCceEEEEcCCCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 35789999996644322 11222 68999999999999999998654
No 209
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.45 E-value=3.2e-13 Score=115.94 Aligned_cols=99 Identities=13% Similarity=0.109 Sum_probs=81.5
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++. .+++++++|+.+ ++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------------~~v~~~~~d~~~-~~---- 244 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS---------------NNLTYVGGDMFT-SI---- 244 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB---------------TTEEEEECCTTT-CC----
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC---------------CCcEEEeccccC-CC----
Confidence 346689999999999999988764 4458999999 9898877541 138999999876 44
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCC---CcEEEEEe
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRP---GGTFIGTM 206 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~---gG~li~~~ 206 (262)
+ .||+|++.+++||+ +.+....++++++++|+| ||++++..
T Consensus 245 -p--~~D~v~~~~~lh~~--~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 245 -P--NADAVLLKYILHNW--TDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp -C--CCSEEEEESCGGGS--CHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred -C--CccEEEeehhhccC--CHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 3 39999999999998 556667999999999999 99998864
No 210
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.45 E-value=1.3e-12 Score=112.28 Aligned_cols=106 Identities=14% Similarity=0.112 Sum_probs=87.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..+..+|||||||+|.++..+++. +..+++..|+ +.+++.|++.... ....+|+++.+|+...+.
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~---------~~~~rv~~~~gD~~~~~~---- 242 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSF---------QEEEQIDFQEGDFFKDPL---- 242 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----------CCSEEEEESCTTTSCC----
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhh---------cccCceeeecCccccCCC----
Confidence 345679999999999999998874 4557889997 7899999988752 224679999999876543
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
..+|+|++..++|++ +.++..++|+++++.|+|||.+++..
T Consensus 243 ---~~~D~~~~~~vlh~~--~d~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 243 ---PEADLYILARVLHDW--ADGKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp ---CCCSEEEEESSGGGS--CHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ---CCceEEEeeeecccC--CHHHHHHHHHHHHhhCCCCCEEEEEE
Confidence 357999999999988 77788999999999999999988764
No 211
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.44 E-value=7.3e-13 Score=123.01 Aligned_cols=113 Identities=17% Similarity=0.224 Sum_probs=89.6
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCC-CCeEEEeCccccc-cccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS-FPARLICGDCYEV-HLDKVL 160 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~~~-~~~~~~ 160 (262)
.++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++... ++. .+++++++|+.+. +.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~n--------gl~~~~v~~i~~D~~~~l~~---- 605 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN--------GLTGRAHRLIQADCLAWLRE---- 605 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT--------TCCSTTEEEEESCHHHHHHH----
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc--------CCCccceEEEecCHHHHHHh----
Confidence 468899999999999999888777778999999999999999998732 223 4699999999874 22
Q ss_pred CCCCCeeEEEEccccc-------ccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 161 ADDAPFDICSCQFAMH-------YSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~-------~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
..++||+|++..... ..+....+...++..+.++|+|||.|++++..
T Consensus 606 -~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 606 -ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp -CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 357899999865321 11223467888999999999999999998765
No 212
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.44 E-value=4e-13 Score=114.21 Aligned_cols=115 Identities=18% Similarity=0.204 Sum_probs=83.6
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCC-CCCeEEEeCccccccccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~ 160 (262)
.++.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++...+ .++ ..+++++++|+.+....
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~------~gl~~~rv~~~~~D~~~~l~~--- 189 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVA------IGYEDPRVNLVIGDGVAFLKN--- 189 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH------GGGGSTTEEEEESCHHHHHHT---
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc------cccCCCcEEEEECCHHHHHHh---
Confidence 46789999999999999988775 34689999999999999999875210 011 34699999998764210
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
.++++||+|++................+++.+.++|+|||.+++..
T Consensus 190 ~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 190 AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 0357899999876422110010113689999999999999999974
No 213
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.44 E-value=4.1e-13 Score=112.87 Aligned_cols=115 Identities=19% Similarity=0.169 Sum_probs=82.8
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCC-CCCeEEEeCccccc-cccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEV-HLDK 158 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~-~~~~ 158 (262)
..++.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++.... ..+ ..+++++++|+.+. +.
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~------~~~~~~rv~v~~~Da~~~l~~-- 164 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMA------IGYSSSKLTLHVGDGFEFMKQ-- 164 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH------GGGGCTTEEEEESCHHHHHHT--
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhh------cccCCCcEEEEECcHHHHHhh--
Confidence 346789999999999999998775 35689999999999999999875210 011 35699999998763 22
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.+++||+|++....+...........+++++.++|+|||.+++...
T Consensus 165 ---~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 165 ---NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp ---CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 3578999998765432100001235789999999999999998763
No 214
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.44 E-value=5.3e-13 Score=112.54 Aligned_cols=115 Identities=18% Similarity=0.184 Sum_probs=82.4
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCC-CCCeEEEeCcccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~ 159 (262)
..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...+ .++ ..+++++++|+......
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~------~~~~~~rv~~~~~D~~~~l~~-- 177 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMS------CGFSHPKLDLFCGDGFEFLKN-- 177 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTS------GGGGCTTEEEECSCHHHHHHH--
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhc------cccCCCCEEEEEChHHHHHHh--
Confidence 345689999999999999988775 35689999999999999999876321 011 35699999998764211
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHH--HHHHHHHHhccCCCcEEEEEeCC
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARA--RRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~--~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
.+++||+|++....+ . .+.... ..+++.+.++|+|||.+++...+
T Consensus 178 --~~~~fD~Ii~d~~~~-~-~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~ 224 (314)
T 2b2c_A 178 --HKNEFDVIITDSSDP-V-GPAESLFGQSYYELLRDALKEDGILSSQGES 224 (314)
T ss_dssp --CTTCEEEEEECCC---------------HHHHHHHHEEEEEEEEEECCC
T ss_pred --cCCCceEEEEcCCCC-C-CcchhhhHHHHHHHHHhhcCCCeEEEEECCC
Confidence 357899999866432 2 111111 68999999999999999998643
No 215
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.43 E-value=3.5e-13 Score=113.82 Aligned_cols=114 Identities=18% Similarity=0.143 Sum_probs=85.3
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccC-C-CCCeEEEeCccccc-ccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKK-F-SFPARLICGDCYEV-HLD 157 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~-~-~~~v~~~~~d~~~~-~~~ 157 (262)
..++.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++...+ .+ . ..+++++++|+.+. +.
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~------~~~~~~~~v~~~~~D~~~~l~~- 147 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWH------QGAFDDPRAVLVIDDARAYLER- 147 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHH------TTGGGCTTEEEEESCHHHHHHH-
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhc------cccccCCceEEEEchHHHHHHh-
Confidence 356689999999999999988775 35689999999999999999875210 00 1 34699999998764 22
Q ss_pred cccCCCCCeeEEEEcccccccC-CCHHH--HHHHHHHHHhccCCCcEEEEEe
Q 024797 158 KVLADDAPFDICSCQFAMHYSW-STEAR--ARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~-~~~~~--~~~~l~~~~~~L~~gG~li~~~ 206 (262)
.+++||+|++....+... .+... ...+++.+.++|+|||.+++..
T Consensus 148 ----~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 148 ----TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp ----CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ----cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 367899999987654300 01111 3688999999999999999875
No 216
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.43 E-value=9.3e-13 Score=108.79 Aligned_cols=102 Identities=10% Similarity=0.041 Sum_probs=83.5
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++.. +++..+++++++|+.++.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~--------N~v~~~v~~~~~D~~~~~------ 188 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHL--------NKVEDRMSAYNMDNRDFP------ 188 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHH--------TTCTTTEEEECSCTTTCC------
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHH--------cCCCCcEEEEeCcHHHhc------
Confidence 368999999999999999998877767899999999999999999873 344567999999998875
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
..+.||.|+++.... ...++..+.+.|++||++.+.
T Consensus 189 ~~~~~D~Vi~~~p~~--------~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 189 GENIADRILMGYVVR--------THEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp CCSCEEEEEECCCSS--------GGGGHHHHHHHEEEEEEEEEE
T ss_pred cccCCCEEEECCCCc--------HHHHHHHHHHHcCCCCEEEEE
Confidence 467899998764221 235677888999999998653
No 217
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.43 E-value=5.6e-13 Score=112.85 Aligned_cols=115 Identities=13% Similarity=0.152 Sum_probs=85.3
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCC-CCCeEEEeCcccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~ 159 (262)
..++.+|||+|||+|..+..+++. +..+++++|+|+.+++.|++++.... ... ..+++++++|+.+....
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~------~~~~~~~v~~~~~D~~~~l~~-- 185 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS------CGYEDKRVNVFIEDASKFLEN-- 185 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS------GGGGSTTEEEEESCHHHHHHH--
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc------cccCCCcEEEEEccHHHHHhh--
Confidence 346689999999999999988775 45689999999999999999876310 011 34699999998764211
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHH--HHHHHHHHhccCCCcEEEEEeCC
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARA--RRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~--~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
.+++||+|++...-... ..... ..+++++.++|+|||.+++...+
T Consensus 186 --~~~~fDvIi~d~~~p~~--~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 186 --VTNTYDVIIVDSSDPIG--PAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp --CCSCEEEEEEECCCSSS--GGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred --cCCCceEEEECCcCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 35789999987532211 11111 68999999999999999997654
No 218
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.43 E-value=8.2e-13 Score=113.06 Aligned_cols=129 Identities=16% Similarity=0.173 Sum_probs=92.7
Q ss_pred ccchhHHHHHHHHHHHH-hccCCCeEEEecCCCCcchHHHHhcCC------CeEEEEeCChhHHHHHHHHhccCcccccc
Q 024797 64 IHLKKLNNWIKSVLVQL-YARRGDVVLDLACGKGGDLIKWDKAKI------GYYVGIDIAEGSIEDCRTRYNGDADHHQR 136 (262)
Q Consensus 64 ~~~~~~~~~~~~~l~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~ 136 (262)
+..+.+...+..++..+ ...++.+|||+|||+|.++..+++... ..++|+|+++.+++.|+.++...
T Consensus 109 ~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~------ 182 (344)
T 2f8l_A 109 MTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ------ 182 (344)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH------
T ss_pred CChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC------
Confidence 34455555545555443 233567999999999999888765321 57999999999999999987521
Q ss_pred ccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHH---------------HHHHHHHHHhccCCCcE
Q 024797 137 RKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEAR---------------ARRALANVSALLRPGGT 201 (262)
Q Consensus 137 ~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~---------------~~~~l~~~~~~L~~gG~ 201 (262)
+.++.+.++|..... ..++||+|+++..+.++ ...+. ...++.++.+.|+|||+
T Consensus 183 ----g~~~~i~~~D~l~~~------~~~~fD~Ii~NPPfg~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~ 251 (344)
T 2f8l_A 183 ----RQKMTLLHQDGLANL------LVDPVDVVISDLPVGYY-PDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGY 251 (344)
T ss_dssp ----TCCCEEEESCTTSCC------CCCCEEEEEEECCCSEE-SCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEE
T ss_pred ----CCCceEEECCCCCcc------ccCCccEEEECCCCCCc-CchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCE
Confidence 124789999976632 35789999999877654 22211 13689999999999999
Q ss_pred EEEEeCCh
Q 024797 202 FIGTMPDA 209 (262)
Q Consensus 202 li~~~~~~ 209 (262)
+++.+|+.
T Consensus 252 ~~~v~p~~ 259 (344)
T 2f8l_A 252 LFFLVPDA 259 (344)
T ss_dssp EEEEEEGG
T ss_pred EEEEECch
Confidence 99988643
No 219
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.43 E-value=7.6e-13 Score=107.00 Aligned_cols=108 Identities=14% Similarity=0.101 Sum_probs=82.3
Q ss_pred cCCCeEEEecCCCCcchHHHHhcC--CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
.++.+|||+|||+|..+..++... .++++++|+++.+++.|++++... +...+++++++|+.+... ...
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--------g~~~~i~~~~~d~~~~l~-~l~ 141 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA--------GVAEKISLRLGPALATLE-QLT 141 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--------TCGGGEEEEESCHHHHHH-HHH
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCcEEEEEcCHHHHHH-HHH
Confidence 467899999999999998887642 458999999999999999987632 223458999999754211 010
Q ss_pred CCC--CCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 161 ADD--APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 161 ~~~--~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
..+ ++||+|++.... .+...++.++.++|+|||.+++..
T Consensus 142 ~~~~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 142 QGKPLPEFDLIFIDADK-------RNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp TSSSCCCEEEEEECSCG-------GGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred hcCCCCCcCEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEeC
Confidence 022 789999987653 345778999999999999999864
No 220
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.42 E-value=5e-13 Score=111.99 Aligned_cols=114 Identities=17% Similarity=0.140 Sum_probs=82.9
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCC-CCCeEEEeCccccc-ccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEV-HLDKV 159 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~-~~~~~ 159 (262)
..+.+|||+|||+|..+..+++. +..+|+++|+|+.+++.|++++...+ ... ..+++++++|+... +.
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~------~~~~~~~v~~~~~D~~~~l~~--- 159 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTS------CGFDDPRAEIVIANGAEYVRK--- 159 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHH------GGGGCTTEEEEESCHHHHGGG---
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhc------cccCCCceEEEECcHHHHHhh---
Confidence 45689999999999999998875 45689999999999999999874210 011 34699999998764 22
Q ss_pred cCCCCCeeEEEEcccccccCCCHH--HHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEA--RARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~--~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
.+++||+|++.....+. .... ....+++.+.++|+|||.+++.+.+
T Consensus 160 --~~~~fD~Ii~d~~~~~~-~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 160 --FKNEFDVIIIDSTDPTA-GQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp --CSSCEEEEEEEC-----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred --CCCCceEEEEcCCCccc-CchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 35789999986432211 0111 1268899999999999999998655
No 221
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.42 E-value=7.8e-14 Score=114.25 Aligned_cols=108 Identities=9% Similarity=0.150 Sum_probs=72.3
Q ss_pred CCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc---ccccc
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV---HLDKV 159 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~ 159 (262)
++.+|||+|||+|.++..++.. +..+|+|+|+|+.|++.|++++... +...+++++++|+.+. ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~~~~--- 133 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN--------NLSDLIKVVKVPQKTLLMDAL--- 133 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEECCTTCSSTTTS---
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc--------CCCccEEEEEcchhhhhhhhh---
Confidence 5679999999999988887764 3468999999999999999988632 2234599999997652 22
Q ss_pred cCC---CCCeeEEEEcccccccCCC-----------HHHHHHHHHHHHhccCCCcEEEE
Q 024797 160 LAD---DAPFDICSCQFAMHYSWST-----------EARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 160 ~~~---~~~fD~V~~~~~l~~~~~~-----------~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
+ +++||+|+++..+++.... .+....++.++.++|+|||.+.+
T Consensus 134 --~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 134 --KEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp --TTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred --hcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 2 2689999998655433100 01123456677777888777654
No 222
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.42 E-value=9.6e-13 Score=103.24 Aligned_cols=107 Identities=18% Similarity=0.187 Sum_probs=75.9
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc-
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL- 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~- 160 (262)
..++.+|||+|||+|.++..+++. .+.|+|+|+++.. . ..++.++++|+.+.+.....
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~--------~------------~~~v~~~~~D~~~~~~~~~~~ 81 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME--------E------------IAGVRFIRCDIFKETIFDDID 81 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC--------C------------CTTCEEEECCTTSSSHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc--------c------------CCCeEEEEccccCHHHHHHHH
Confidence 357889999999999999988766 6689999999841 1 23589999999875421100
Q ss_pred --CC---CCCeeEEEEcccccccC-------CCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 161 --AD---DAPFDICSCQFAMHYSW-------STEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 161 --~~---~~~fD~V~~~~~l~~~~-------~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
.. .++||+|+++....... ........++..+.++|+|||.|++.+...
T Consensus 82 ~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 82 RALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 01 14899999976432110 011234678899999999999999877543
No 223
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.42 E-value=7.3e-13 Score=107.48 Aligned_cols=109 Identities=11% Similarity=0.050 Sum_probs=83.5
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-C-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
.++.+|||+|||+|..+..+++. + .++++++|+++.+++.|++++... +...+++++++|+.+.......
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--------g~~~~i~~~~gda~~~l~~l~~ 140 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA--------GVEHKINFIESDAMLALDNLLQ 140 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--------TCGGGEEEEESCHHHHHHHHHH
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCCcEEEEEcCHHHHHHHHHh
Confidence 46789999999999999988774 2 568999999999999999988743 2234699999998654110000
Q ss_pred --CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 161 --ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 161 --~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
.+.++||+|++.... .....+++.+.++|+|||++++..
T Consensus 141 ~~~~~~~fD~I~~d~~~-------~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 141 GQESEGSYDFGFVDADK-------PNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp STTCTTCEEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCCCcCEEEECCch-------HHHHHHHHHHHHhcCCCeEEEEec
Confidence 014789999987532 346788999999999999999864
No 224
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.41 E-value=8.5e-13 Score=106.23 Aligned_cols=109 Identities=19% Similarity=0.163 Sum_probs=83.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-C-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (262)
..++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++... +...+++++++|+.+... ..
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------g~~~~i~~~~~d~~~~~~-~~ 137 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA--------EAEHKIDLRLKPALETLD-EL 137 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT--------TCTTTEEEEESCHHHHHH-HH
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--------CCCCeEEEEEcCHHHHHH-HH
Confidence 356789999999999999888764 2 568999999999999999987632 223569999999865411 00
Q ss_pred cCC--CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 160 LAD--DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 160 ~~~--~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
... .++||+|++.... .....+++++.++|+|||.+++..
T Consensus 138 ~~~~~~~~~D~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 138 LAAGEAGTFDVAVVDADK-------ENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp HHTTCTTCEEEEEECSCS-------TTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhcCCCCCccEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEEC
Confidence 001 1689999987643 335678999999999999999864
No 225
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.41 E-value=1.5e-12 Score=113.45 Aligned_cols=117 Identities=14% Similarity=0.098 Sum_probs=87.9
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCC-CCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|++++... +. ..+++++++|+.+.... ...
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~n--------gl~~~~v~~~~~D~~~~~~~-~~~ 289 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELN--------KLDLSKAEFVRDDVFKLLRT-YRD 289 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT--------TCCGGGEEEEESCHHHHHHH-HHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--------CCCccceEEEECCHHHHHHH-HHh
Confidence 578899999999999999998766668999999999999999988632 22 22689999998775320 000
Q ss_pred CCCCeeEEEEccccc-----ccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 162 DDAPFDICSCQFAMH-----YSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~-----~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
...+||+|++..... ++.........++.++.+.|+|||.+++++..
T Consensus 290 ~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 290 RGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp TTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 146899999874221 11112256788999999999999999988754
No 226
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.41 E-value=9.8e-13 Score=103.22 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=75.6
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CC---------CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEE-eCc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KI---------GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI-CGD 150 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~---------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~-~~d 150 (262)
..++.+|||+|||+|.++..+++. +. .+|+|+|+|+.+ . ..++.++ ++|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~------------~~~~~~~~~~d 79 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------P------------LEGATFLCPAD 79 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------C------------CTTCEEECSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------c------------CCCCeEEEecc
Confidence 357889999999999999988775 32 689999999832 0 1247788 888
Q ss_pred ccccccccc---cCCCCCeeEEEEcccccccCCCHHHH-------HHHHHHHHhccCCCcEEEEEeCCh
Q 024797 151 CYEVHLDKV---LADDAPFDICSCQFAMHYSWSTEARA-------RRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 151 ~~~~~~~~~---~~~~~~fD~V~~~~~l~~~~~~~~~~-------~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
+...+.... ..++++||+|++...++.......+. ..++.++.++|+|||.+++.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 80 VTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp TTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred CCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 766432100 01346899999976554321111222 578999999999999999987643
No 227
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.40 E-value=7.8e-13 Score=115.33 Aligned_cols=118 Identities=19% Similarity=0.169 Sum_probs=88.1
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|++++... +...+++++++|+.+.... ....
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n--------~~~~~v~~~~~d~~~~~~~-~~~~ 286 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLN--------GVEDRMKFIVGSAFEEMEK-LQKK 286 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT--------TCGGGEEEEESCHHHHHHH-HHHT
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc--------CCCccceEEECCHHHHHHH-HHhh
Confidence 378899999999999999998766668999999999999999988632 2223699999998765320 0002
Q ss_pred CCCeeEEEEcccccc-----cCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 163 DAPFDICSCQFAMHY-----SWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~-----~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
.++||+|++...... +.........++.++.++|+|||.+++++.+.
T Consensus 287 ~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 287 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 568999998643211 00112567889999999999999998887643
No 228
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.40 E-value=1.1e-12 Score=109.39 Aligned_cols=113 Identities=20% Similarity=0.337 Sum_probs=82.9
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (262)
.+..++..+...++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.++++....+ ...+++++++|+
T Consensus 16 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~v~~vD~~~~~~~~a~~~~~~~~--------~~~~v~~~~~D~ 86 (285)
T 1zq9_A 16 IINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVAELHKRVQGTP--------VASKLQVLVGDV 86 (285)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTST--------TGGGEEEEESCT
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC-CEEEEEECCHHHHHHHHHHHHhcC--------CCCceEEEEcce
Confidence 34556666666788899999999999999988754 489999999999999999875321 124699999999
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHH--------------HH--HhccCCCcEEE
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALA--------------NV--SALLRPGGTFI 203 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~--------------~~--~~~L~~gG~li 203 (262)
...++ ..||+|+++..++.. .+....++. ++ +++|+|||.++
T Consensus 87 ~~~~~-------~~fD~vv~nlpy~~~---~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 87 LKTDL-------PFFDTCVANLPYQIS---SPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp TTSCC-------CCCSEEEEECCGGGH---HHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred ecccc-------hhhcEEEEecCcccc---hHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 88764 379999997766542 222223332 22 36899999874
No 229
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.39 E-value=3.4e-13 Score=113.28 Aligned_cols=107 Identities=21% Similarity=0.181 Sum_probs=74.2
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeC----ChhHHHHHHHHhccCccccccccCCCCCeEEEeC-ccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDI----AEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG-DCYEVHL 156 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~----s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~ 156 (262)
..++.+|||+|||+|.++..+++. +.|+|+|+ ++.+++.+. ... ....++.++++ |+..++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~---------~~~~~v~~~~~~D~~~l~- 145 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MST---------YGWNLVRLQSGVDVFFIP- 145 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCS---------TTGGGEEEECSCCTTTSC-
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhh---------cCCCCeEEEeccccccCC-
Confidence 457789999999999999988765 58999999 554432110 010 00135889998 887653
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHH---HHHHHHHHhccCCCcEEEEEeCCh
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARA---RRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~---~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
.++||+|+|..+.+ ......+. ..+|..+.++|+|||.|++.+...
T Consensus 146 ------~~~fD~V~sd~~~~-~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 ------PERCDTLLCDIGES-SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp ------CCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ------cCCCCEEEECCccc-cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 46899999987653 10001121 257899999999999999987654
No 230
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.39 E-value=1.4e-12 Score=105.48 Aligned_cols=111 Identities=11% Similarity=0.100 Sum_probs=72.9
Q ss_pred HHHHHHHHhcc-CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEE-eCc
Q 024797 73 IKSVLVQLYAR-RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI-CGD 150 (262)
Q Consensus 73 ~~~~l~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~-~~d 150 (262)
+...+..+... ++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.|+++... +... ..+
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~--------------~~~~~~~~ 90 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDER--------------VVVMEQFN 90 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTT--------------EEEECSCC
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcc--------------ccccccce
Confidence 33445444433 4669999999999999988877656899999999999998775431 1111 111
Q ss_pred ccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+........ +...||.+.+..++.++ ..++.+++++|+|||.+++.+
T Consensus 91 ~~~~~~~~~--~~~~~d~~~~D~v~~~l-------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 91 FRNAVLADF--EQGRPSFTSIDVSFISL-------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp GGGCCGGGC--CSCCCSEEEECCSSSCG-------GGTHHHHHHHSCTTCEEEEEE
T ss_pred EEEeCHhHc--CcCCCCEEEEEEEhhhH-------HHHHHHHHHhccCCCEEEEEE
Confidence 111110000 12235666665555443 678999999999999998864
No 231
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.38 E-value=2.7e-12 Score=113.61 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=85.3
Q ss_pred HhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (262)
+...++.+|||+|||+|..+..++.. ..+.++++|+|+.+++.+++++...+. .++.++++|+..++..
T Consensus 255 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~---------~~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 255 LDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI---------KIVKPLVKDARKAPEI 325 (450)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC---------CSEEEECSCTTCCSSS
T ss_pred cCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC---------CcEEEEEcChhhcchh
Confidence 34568889999999999999988763 236899999999999999998864322 2589999998876510
Q ss_pred cccCCCCCeeEEEEc------ccccccCCCH-------------HHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 158 KVLADDAPFDICSCQ------FAMHYSWSTE-------------ARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~------~~l~~~~~~~-------------~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.++++||+|++. +++.+. +.. ..+..++.++.++|+|||.+++++.
T Consensus 326 ---~~~~~fD~Vl~D~Pcsg~g~~~~~-pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 326 ---IGEEVADKVLLDAPCTSSGTIGKN-PELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp ---SCSSCEEEEEEECCCCCGGGTTTS-TTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred ---hccCCCCEEEEcCCCCCCeeeccC-hhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 134789999973 222221 110 1126789999999999999998764
No 232
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.38 E-value=3.8e-12 Score=110.09 Aligned_cols=106 Identities=11% Similarity=-0.047 Sum_probs=83.2
Q ss_pred CCCeEEEecCCCCcchHHHHhcCC-CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc-cccccccC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VHLDKVLA 161 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~ 161 (262)
++.+|||+| |+|.++..++.... .+|+|+|+|+.|++.|++++... +.. +++++++|+.+ ++..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~--------g~~-~v~~~~~D~~~~l~~~---- 237 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI--------GYE-DIEIFTFDLRKPLPDY---- 237 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH--------TCC-CEEEECCCTTSCCCTT----
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------CCC-CEEEEEChhhhhchhh----
Confidence 578999999 99999998876543 68999999999999999987632 222 69999999987 4420
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCc-EEEEEeCC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGG-TFIGTMPD 208 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG-~li~~~~~ 208 (262)
.+++||+|+++..++.. ....++.++.++|+||| .+++++..
T Consensus 238 ~~~~fD~Vi~~~p~~~~-----~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 238 ALHKFDTFITDPPETLE-----AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp TSSCBSEEEECCCSSHH-----HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred ccCCccEEEECCCCchH-----HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 24689999998766532 35889999999999999 44666544
No 233
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.37 E-value=1.7e-12 Score=112.68 Aligned_cols=111 Identities=13% Similarity=0.038 Sum_probs=81.5
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++..++..+.. |+++|+|+.+++.|++++... +. ...+.++|+.+.... .
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~n--------g~--~~~~~~~D~~~~l~~----~ 277 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRL--------GL--RVDIRHGEALPTLRG----L 277 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHH--------TC--CCEEEESCHHHHHHT----C
T ss_pred cCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHh--------CC--CCcEEEccHHHHHHH----h
Confidence 46899999999999999999876554 999999999999999987632 11 235668998765311 1
Q ss_pred CCCeeEEEEcccccc-----cCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 163 DAPFDICSCQFAMHY-----SWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~-----~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
.+.||+|+++..... ......+...++..+.++|+|||.|++.+.+
T Consensus 278 ~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 278 EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 344999998753311 0011245678999999999999999866543
No 234
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.36 E-value=1.7e-12 Score=111.72 Aligned_cols=98 Identities=13% Similarity=0.150 Sum_probs=80.0
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++. .+++++.+|+.+ ++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------------~~v~~~~~d~~~-~~----- 249 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN---------------ENLNFVGGDMFK-SI----- 249 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC---------------SSEEEEECCTTT-CC-----
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC---------------CCcEEEeCccCC-CC-----
Confidence 46689999999999999988874 4457999999 6787665431 238999999877 54
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCC---CcEEEEEe
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRP---GGTFIGTM 206 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~---gG~li~~~ 206 (262)
+ .||+|++..++|++ +.+....++++++++|+| ||++++..
T Consensus 250 ~--~~D~v~~~~vlh~~--~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 250 P--SADAVLLKWVLHDW--NDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp C--CCSEEEEESCGGGS--CHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred C--CceEEEEcccccCC--CHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 3 49999999999988 556667999999999999 99988854
No 235
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.35 E-value=1e-12 Score=114.07 Aligned_cols=114 Identities=13% Similarity=0.152 Sum_probs=85.6
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++...+ ..++.++++|+.+.... .....
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~---------~~~~~~~~~d~~~~~~~-~~~~~ 277 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNG---------LGNVRVLEANAFDLLRR-LEKEG 277 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTT---------CTTEEEEESCHHHHHHH-HHHTT
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcC---------CCCceEEECCHHHHHHH-HHhcC
Confidence 6789999999999999998876 5689999999999999999886322 22389999998765320 00025
Q ss_pred CCeeEEEEcccccc-----cCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 164 APFDICSCQFAMHY-----SWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 164 ~~fD~V~~~~~l~~-----~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
.+||+|++...... ..........++..+.++|+|||.+++++..
T Consensus 278 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 278 ERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 68999998643211 0011256778999999999999999998754
No 236
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.35 E-value=6.9e-12 Score=111.49 Aligned_cols=111 Identities=15% Similarity=0.116 Sum_probs=84.0
Q ss_pred CCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
++.+|||+|||+|..+..++.. ..+.|+++|+|+.+++.+++++...+. .++.++++|+..++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~---------~nv~~~~~D~~~~~~~---- 183 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI---------SNVALTHFDGRVFGAA---- 183 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC---------CSEEEECCCSTTHHHH----
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---------CcEEEEeCCHHHhhhh----
Confidence 7899999999999999988774 346899999999999999998864322 2589999999876521
Q ss_pred CCCCeeEEEEcc------cccccCC-----CH-------HHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 162 DDAPFDICSCQF------AMHYSWS-----TE-------ARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 162 ~~~~fD~V~~~~------~l~~~~~-----~~-------~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.++.||+|++.. ++.+..+ +. ..+..++.++.++|||||+|++++.
T Consensus 184 ~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 184 VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 246899999842 2211100 11 2246789999999999999998865
No 237
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.35 E-value=2.3e-12 Score=103.95 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=81.9
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||+|-++..++.. +...|+++|+++.|++.+++++... +....+.+.|...-+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~----------g~~~~~~v~D~~~~~------ 194 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL----------NVPHRTNVADLLEDR------ 194 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT----------TCCEEEEECCTTTSC------
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc----------CCCceEEEeeecccC------
Confidence 45779999999999998888764 5668999999999999999998732 334778888876654
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
+.++||+|+++-+++|+ ........+ ++.+.|+++|.+|-
T Consensus 195 p~~~~DvaL~lkti~~L--e~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 195 LDEPADVTLLLKTLPCL--ETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp CCSCCSEEEETTCHHHH--HHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred CCCCcchHHHHHHHHHh--hhhhhHHHH-HHHHHhCCCCEEEe
Confidence 47889999999999988 222223455 89999999997663
No 238
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.34 E-value=3.1e-12 Score=102.24 Aligned_cols=103 Identities=17% Similarity=0.111 Sum_probs=80.8
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||.|-++..+. +...|+|+|+++.|++.+++.+... +.+..+.++|....+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~----------g~~~~~~v~D~~~~~~------ 165 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREK----------DWDFTFALQDVLCAPP------ 165 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHT----------TCEEEEEECCTTTSCC------
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhc----------CCCceEEEeecccCCC------
Confidence 467899999999998888875 6668999999999999999987632 3457899999877664
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.++||+|++.-++||+ ........+ ++.+.|+++|.+| +.|
T Consensus 166 ~~~~DvvLllk~lh~L--E~q~~~~~~-~ll~aL~~~~vvV-sfP 206 (253)
T 3frh_A 166 AEAGDLALIFKLLPLL--EREQAGSAM-ALLQSLNTPRMAV-SFP 206 (253)
T ss_dssp CCBCSEEEEESCHHHH--HHHSTTHHH-HHHHHCBCSEEEE-EEE
T ss_pred CCCcchHHHHHHHHHh--hhhchhhHH-HHHHHhcCCCEEE-EcC
Confidence 5699999999999987 222333344 8888999987554 444
No 239
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.33 E-value=6.2e-12 Score=110.70 Aligned_cols=115 Identities=18% Similarity=0.194 Sum_probs=85.2
Q ss_pred HhccCCCeEEEecCCCCcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
+...++.+|||+|||+|..+..++... .+.|+++|+++.+++.+++++... +.++.++++|+...+..
T Consensus 242 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~----------g~~~~~~~~D~~~~~~~- 310 (429)
T 1sqg_A 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL----------GMKATVKQGDGRYPSQW- 310 (429)
T ss_dssp HCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT----------TCCCEEEECCTTCTHHH-
T ss_pred cCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc----------CCCeEEEeCchhhchhh-
Confidence 345688899999999999999887743 368999999999999999987632 22478899998876510
Q ss_pred ccCCCCCeeEEEEcc------cccccCC-----CH-------HHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 159 VLADDAPFDICSCQF------AMHYSWS-----TE-------ARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~------~l~~~~~-----~~-------~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.+.++||+|++.. ++.+..+ +. ..+..++.++.+.|+|||.+++++.
T Consensus 311 --~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 311 --CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp --HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred --cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 0457899999742 2222100 00 1236889999999999999998764
No 240
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.33 E-value=1.2e-12 Score=101.04 Aligned_cols=93 Identities=16% Similarity=0.247 Sum_probs=75.0
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||. +++|+|+.|++.|+++... ++.+.++|+.+++... .
T Consensus 10 ~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~-------------~~~~~~~d~~~~~~~~--~ 59 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN-------------EGRVSVENIKQLLQSA--H 59 (176)
T ss_dssp CCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT-------------TSEEEEEEGGGGGGGC--C
T ss_pred CCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc-------------CcEEEEechhcCcccc--C
Confidence 46889999999986 2399999999999988641 3889999998876410 1
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++++||+|++..+++|+.. +...++++++++|||||++++..+
T Consensus 60 ~~~~fD~V~~~~~l~~~~~---~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 60 KESSFDIILSGLVPGSTTL---HSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp CSSCEEEEEECCSTTCCCC---CCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEeEEEECChhhhccc---CHHHHHHHHHHHCCCCEEEEEEcc
Confidence 4688999999999998722 347899999999999999999654
No 241
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.33 E-value=3.2e-12 Score=112.61 Aligned_cols=115 Identities=17% Similarity=0.098 Sum_probs=85.5
Q ss_pred HhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (262)
+.+.++.+|||+|||+|..+..++.. ..+.|+++|+|+.+++.+++++...+. .++.++++|+..+...
T Consensus 101 L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~---------~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 101 AAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV---------SNAIVTNHAPAELVPH 171 (456)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC---------SSEEEECCCHHHHHHH
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---------CceEEEeCCHHHhhhh
Confidence 34568899999999999999988763 446899999999999999998874332 3588999998776421
Q ss_pred cccCCCCCeeEEEEcccc---cccCCCH---------------HHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 158 KVLADDAPFDICSCQFAM---HYSWSTE---------------ARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l---~~~~~~~---------------~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.++.||+|++.... ..+-..+ ..+..++.++.++|+|||.|+.++.
T Consensus 172 ----~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 172 ----FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp ----HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred ----ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 25789999985421 0000011 2234789999999999999998765
No 242
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.32 E-value=1.2e-11 Score=103.64 Aligned_cols=110 Identities=18% Similarity=0.312 Sum_probs=76.7
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (262)
++..++..+...++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.++++....+ ..+++++++|+
T Consensus 30 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~---------~~~v~~~~~D~ 99 (299)
T 2h1r_A 30 ILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEG---------YNNLEVYEGDA 99 (299)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTT---------CCCEEC----C
T ss_pred HHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcC---------CCceEEEECch
Confidence 4555666666678889999999999999988765 4589999999999999999875211 14689999999
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHHHHHHHH---------------HHHHhccCCCcE
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRAL---------------ANVSALLRPGGT 201 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l---------------~~~~~~L~~gG~ 201 (262)
..++. ++||+|+++...+.. .+....++ ..+.++++++|.
T Consensus 100 ~~~~~-------~~~D~Vv~n~py~~~---~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~ 154 (299)
T 2h1r_A 100 IKTVF-------PKFDVCTANIPYKIS---SPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGD 154 (299)
T ss_dssp CSSCC-------CCCSEEEEECCGGGH---HHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTS
T ss_pred hhCCc-------ccCCEEEEcCCcccc---cHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCC
Confidence 87754 479999997765532 22333444 335677777764
No 243
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.32 E-value=5.1e-12 Score=111.48 Aligned_cols=114 Identities=17% Similarity=0.155 Sum_probs=84.7
Q ss_pred HhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (262)
+...++.+|||+|||+|..+..++.. ..+.|+++|+|+.+++.+++++... +.. +.++++|+..++..
T Consensus 97 L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~--------G~~--v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 97 LDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW--------GAP--LAVTQAPPRALAEA 166 (464)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH--------CCC--CEEECSCHHHHHHH
T ss_pred cCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------CCe--EEEEECCHHHhhhh
Confidence 34568899999999999999988763 3468999999999999999988632 222 88999998776510
Q ss_pred cccCCCCCeeEEEEccc------ccccCC-----C-------HHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 158 KVLADDAPFDICSCQFA------MHYSWS-----T-------EARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~------l~~~~~-----~-------~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
..++||+|+++.. +....+ + ...+..++.++.++|||||+|+.++.
T Consensus 167 ----~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 167 ----FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp ----HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred ----ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2578999996321 111100 0 12347899999999999999998764
No 244
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.32 E-value=2.6e-12 Score=105.69 Aligned_cols=103 Identities=11% Similarity=-0.041 Sum_probs=79.2
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
..+.+|||+|||+|..+..+++.+ .+++++|+++.+++.|++++..... .....+++++.+|+....
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~-----~~~~~rv~~~~~D~~~~~------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHE-----VKNNKNFTHAKQLLDLDI------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHH-----HHTCTTEEEESSGGGSCC-------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhcc-----ccCCCeEEEEechHHHHH-------
Confidence 456799999999999998887775 7899999999999999987642100 001346899999987642
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++||+|++... + +..+++.+.++|+|||.+++...+
T Consensus 138 -~~fD~Ii~d~~------d---p~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 138 -KKYDLIFCLQE------P---DIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp -CCEEEEEESSC------C---CHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -hhCCEEEECCC------C---hHHHHHHHHHhcCCCcEEEEEcCC
Confidence 67999998731 1 224899999999999999987544
No 245
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.28 E-value=6.5e-11 Score=102.36 Aligned_cols=122 Identities=10% Similarity=0.008 Sum_probs=92.5
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcCC---------------------------------------CeEEEEeCC
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKI---------------------------------------GYYVGIDIA 116 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~---------------------------------------~~v~gvD~s 116 (262)
++......++..|||++||+|.++...+.... ..++|+|++
T Consensus 186 ll~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid 265 (384)
T 3ldg_A 186 IILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFD 265 (384)
T ss_dssp HHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESC
T ss_pred HHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECC
Confidence 44444456788999999999999887764211 359999999
Q ss_pred hhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhcc
Q 024797 117 EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALL 196 (262)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L 196 (262)
+.|++.|++++... ++...+++.++|+.+++. ..+||+|+++--+..-....++...+.+.+.+.|
T Consensus 266 ~~al~~Ar~Na~~~--------gl~~~I~~~~~D~~~l~~------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~l 331 (384)
T 3ldg_A 266 GRMVEIARKNAREV--------GLEDVVKLKQMRLQDFKT------NKINGVLISNPPYGERLLDDKAVDILYNEMGETF 331 (384)
T ss_dssp HHHHHHHHHHHHHT--------TCTTTEEEEECCGGGCCC------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--------CCCCceEEEECChHHCCc------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHH
Confidence 99999999998743 334469999999998764 4589999998654433345567777888888888
Q ss_pred CC--CcEEEEEeCChHH
Q 024797 197 RP--GGTFIGTMPDANV 211 (262)
Q Consensus 197 ~~--gG~li~~~~~~~~ 211 (262)
++ ||.+++.+++.+.
T Consensus 332 k~~~g~~~~iit~~~~l 348 (384)
T 3ldg_A 332 APLKTWSQFILTNDTDF 348 (384)
T ss_dssp TTCTTSEEEEEESCTTH
T ss_pred hhCCCcEEEEEECCHHH
Confidence 76 9999888887764
No 246
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.27 E-value=2.7e-11 Score=103.28 Aligned_cols=99 Identities=21% Similarity=0.174 Sum_probs=80.0
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+|||+|||+|.++.. ++ +..+|+|+|+|+.+++.|++++... +...++.++++|+.+..
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n--------~l~~~v~~~~~D~~~~~------- 256 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLN--------KLEHKIIPILSDVREVD------- 256 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHT--------TCTTTEEEEESCGGGCC-------
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHc--------CCCCcEEEEECChHHhc-------
Confidence 5788999999999999998 76 5668999999999999999988732 23346999999987752
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
++||+|+++.... ...++..+.++|+|||.+++...
T Consensus 257 -~~fD~Vi~dpP~~--------~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 257 -VKGNRVIMNLPKF--------AHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp -CCEEEEEECCTTT--------GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCcEEEECCcHh--------HHHHHHHHHHHcCCCCEEEEEEe
Confidence 6799999864221 23688999999999999887643
No 247
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.27 E-value=2.2e-11 Score=105.54 Aligned_cols=122 Identities=16% Similarity=0.137 Sum_probs=89.7
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcC---------------------------------------CCeEEEEeCC
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAK---------------------------------------IGYYVGIDIA 116 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---------------------------------------~~~v~gvD~s 116 (262)
++......++.+|||+|||+|.++..++... ...|+|+|++
T Consensus 187 ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 266 (385)
T 3ldu_A 187 LIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDID 266 (385)
T ss_dssp HHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESC
T ss_pred HHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECC
Confidence 3333444577899999999999988775421 1369999999
Q ss_pred hhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhcc
Q 024797 117 EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALL 196 (262)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L 196 (262)
+.|++.|++++... +...++++.++|+.+++. +.+||+|+++-.+..-....++...+.+.+.++|
T Consensus 267 ~~ai~~Ar~Na~~~--------gl~~~i~~~~~D~~~l~~------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~l 332 (385)
T 3ldu_A 267 EESIDIARENAEIA--------GVDEYIEFNVGDATQFKS------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAF 332 (385)
T ss_dssp HHHHHHHHHHHHHH--------TCGGGEEEEECCGGGCCC------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--------CCCCceEEEECChhhcCc------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHH
Confidence 99999999988632 233469999999988764 4689999998765422223355667777777777
Q ss_pred CC--CcEEEEEeCChHH
Q 024797 197 RP--GGTFIGTMPDANV 211 (262)
Q Consensus 197 ~~--gG~li~~~~~~~~ 211 (262)
++ ||.+++.+++...
T Consensus 333 k~~~g~~~~iit~~~~l 349 (385)
T 3ldu_A 333 RKLKNWSYYLITSYEDF 349 (385)
T ss_dssp HTSBSCEEEEEESCTTH
T ss_pred hhCCCCEEEEEECCHHH
Confidence 76 8888888877654
No 248
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.27 E-value=7.9e-11 Score=103.72 Aligned_cols=124 Identities=17% Similarity=0.125 Sum_probs=84.8
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (262)
.+..++..+...++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++...+ ..++.|+++|+
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~---------~~~v~f~~~d~ 343 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNG---------LQNVTFYHENL 343 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTT---------CCSEEEEECCT
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcC---------CCceEEEECCH
Confidence 3444444455567789999999999999998765 5689999999999999999876322 23699999999
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHHH
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKK 215 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~~ 215 (262)
.+... ....++++||+|+++-...-. . .+++.+.+ ++|++.+++++ ++..+.+.
T Consensus 344 ~~~l~-~~~~~~~~fD~Vv~dPPr~g~----~---~~~~~l~~-~~p~~ivyvsc-~p~tlard 397 (433)
T 1uwv_A 344 EEDVT-KQPWAKNGFDKVLLDPARAGA----A---GVMQQIIK-LEPIRIVYVSC-NPATLARD 397 (433)
T ss_dssp TSCCS-SSGGGTTCCSEEEECCCTTCC----H---HHHHHHHH-HCCSEEEEEES-CHHHHHHH
T ss_pred HHHhh-hhhhhcCCCCEEEECCCCccH----H---HHHHHHHh-cCCCeEEEEEC-ChHHHHhh
Confidence 77311 000135689999987644322 2 34444443 78888877764 55544433
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.26 E-value=5.4e-11 Score=99.16 Aligned_cols=89 Identities=19% Similarity=0.214 Sum_probs=73.3
Q ss_pred HHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc
Q 024797 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (262)
Q Consensus 71 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (262)
.+++.++..+...++.+|||||||+|.++..+++. ..+|+|+|+++.+++.+++++.. ..+++++++|
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~-----------~~~v~vi~gD 104 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKEL-----------YNNIEIIWGD 104 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHH-----------CSSEEEEESC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhcc-----------CCCeEEEECc
Confidence 45666777777778899999999999999998876 45899999999999999998751 3469999999
Q ss_pred ccccccccccCCCCCeeEEEEccccc
Q 024797 151 CYEVHLDKVLADDAPFDICSCQFAMH 176 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~fD~V~~~~~l~ 176 (262)
+..+++ ++..||+|+++...+
T Consensus 105 ~l~~~~-----~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 105 ALKVDL-----NKLDFNKVVANLPYQ 125 (295)
T ss_dssp TTTSCG-----GGSCCSEEEEECCGG
T ss_pred hhhCCc-----ccCCccEEEEeCccc
Confidence 998876 456799999886654
No 250
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.25 E-value=4.4e-11 Score=103.82 Aligned_cols=122 Identities=10% Similarity=0.014 Sum_probs=87.7
Q ss_pred HHHHHhccCCCeEEEecCCCCcchHHHHhcCC---------------------------------------CeEEEEeCC
Q 024797 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKI---------------------------------------GYYVGIDIA 116 (262)
Q Consensus 76 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~---------------------------------------~~v~gvD~s 116 (262)
++......++..|||++||+|.++..++.... ..|+|+|++
T Consensus 193 ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 272 (393)
T 3k0b_A 193 LVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDID 272 (393)
T ss_dssp HHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESC
T ss_pred HHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECC
Confidence 34444445778999999999999887764211 359999999
Q ss_pred hhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhcc
Q 024797 117 EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALL 196 (262)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L 196 (262)
+.|++.|++++... ++..++++.++|+.+++. ..+||+|+++--+..-....+....+.+.+.++|
T Consensus 273 ~~al~~Ar~Na~~~--------gl~~~I~~~~~D~~~~~~------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~l 338 (393)
T 3k0b_A 273 ARLIEIAKQNAVEA--------GLGDLITFRQLQVADFQT------EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVY 338 (393)
T ss_dssp HHHHHHHHHHHHHT--------TCTTCSEEEECCGGGCCC------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--------CCCCceEEEECChHhCCC------CCCCCEEEECCCCccccCCchhHHHHHHHHHHHH
Confidence 99999999998743 334468999999988764 4689999998544321112244556666666666
Q ss_pred CC--CcEEEEEeCChHH
Q 024797 197 RP--GGTFIGTMPDANV 211 (262)
Q Consensus 197 ~~--gG~li~~~~~~~~ 211 (262)
++ ||.+++.+++.+.
T Consensus 339 k~~~g~~~~iit~~~~l 355 (393)
T 3k0b_A 339 KRMPTWSVYVLTSYELF 355 (393)
T ss_dssp HTCTTCEEEEEECCTTH
T ss_pred hcCCCCEEEEEECCHHH
Confidence 66 8998888887654
No 251
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.24 E-value=1.7e-11 Score=108.39 Aligned_cols=131 Identities=17% Similarity=0.198 Sum_probs=92.2
Q ss_pred ccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc--------------CCCeEEEEeCChhHHHHHHHHh
Q 024797 62 PIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--------------KIGYYVGIDIAEGSIEDCRTRY 127 (262)
Q Consensus 62 ~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--------------~~~~v~gvD~s~~~~~~a~~~~ 127 (262)
..+.++.+... ++..+.+.++.+|||+|||+|.++..+++. ....++|+|+++.+++.|+.++
T Consensus 152 ~fyTP~~v~~~---mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl 228 (445)
T 2okc_A 152 QYFTPRPLIQA---MVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNL 228 (445)
T ss_dssp GGCCCHHHHHH---HHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cccCcHHHHHH---HHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHH
Confidence 34445555443 333444567789999999999998877652 2346999999999999999887
Q ss_pred ccCccccccccCCC-CCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCC-------------HHHHHHHHHHHH
Q 024797 128 NGDADHHQRRKKFS-FPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWST-------------EARARRALANVS 193 (262)
Q Consensus 128 ~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-------------~~~~~~~l~~~~ 193 (262)
...+ .. .++.+.++|....+. ..+||+|+++..+...... ......++.++.
T Consensus 229 ~l~g--------~~~~~~~i~~gD~l~~~~------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 294 (445)
T 2okc_A 229 YLHG--------IGTDRSPIVCEDSLEKEP------STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMM 294 (445)
T ss_dssp HHTT--------CCSSCCSEEECCTTTSCC------SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHH
T ss_pred HHhC--------CCcCCCCEeeCCCCCCcc------cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHH
Confidence 5322 11 147789999877653 3589999998765543111 011247899999
Q ss_pred hccCCCcEEEEEeCCh
Q 024797 194 ALLRPGGTFIGTMPDA 209 (262)
Q Consensus 194 ~~L~~gG~li~~~~~~ 209 (262)
++|+|||++++.+|+.
T Consensus 295 ~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 295 LMLKTGGRAAVVLPDN 310 (445)
T ss_dssp HHEEEEEEEEEEEEHH
T ss_pred HHhccCCEEEEEECCc
Confidence 9999999999888753
No 252
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.24 E-value=1.6e-10 Score=101.38 Aligned_cols=111 Identities=19% Similarity=0.135 Sum_probs=81.5
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|++++.. .+. . ++++++|+.++..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~--------ngl-~-v~~~~~d~~~~~~----- 351 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEI--------NNV-D-AEFEVASDREVSV----- 351 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH--------HTC-C-EEEEECCTTTCCC-----
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHH--------cCC-c-EEEEECChHHcCc-----
Confidence 467889999999999999988764 45899999999999999998762 122 2 8999999988642
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHHHHhh
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLRE 218 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~~~~~ 218 (262)
. +||+|+++...... ...+++.+. .|+|+|.+++++ ++..+.+.+..
T Consensus 352 -~-~fD~Vv~dPPr~g~------~~~~~~~l~-~l~p~givyvsc-~p~tlarDl~~ 398 (425)
T 2jjq_A 352 -K-GFDTVIVDPPRAGL------HPRLVKRLN-REKPGVIVYVSC-NPETFARDVKM 398 (425)
T ss_dssp -T-TCSEEEECCCTTCS------CHHHHHHHH-HHCCSEEEEEES-CHHHHHHHHHH
T ss_pred -c-CCCEEEEcCCccch------HHHHHHHHH-hcCCCcEEEEEC-ChHHHHhHHhh
Confidence 2 89999987653322 123444444 489999988875 55555555443
No 253
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.23 E-value=2e-11 Score=107.02 Aligned_cols=120 Identities=22% Similarity=0.244 Sum_probs=84.4
Q ss_pred cccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCC
Q 024797 63 IIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF 140 (262)
Q Consensus 63 ~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 140 (262)
.+..+.+.+++. ..+...++.+|||+|||+|.++..+++. ....++|+|+++.+++.| .
T Consensus 21 ~~TP~~l~~~~~---~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~------------ 81 (421)
T 2ih2_A 21 VETPPEVVDFMV---SLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----P------------ 81 (421)
T ss_dssp CCCCHHHHHHHH---HHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----T------------
T ss_pred EeCCHHHHHHHH---HhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----C------------
Confidence 333455544433 3333345679999999999999988764 456899999999998766 1
Q ss_pred CCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCC--------CHHH-----------------HHHHHHHHHhc
Q 024797 141 SFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWS--------TEAR-----------------ARRALANVSAL 195 (262)
Q Consensus 141 ~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~--------~~~~-----------------~~~~l~~~~~~ 195 (262)
++.++++|+.... +.++||+|+++-.+..... ..+. ...++..+.++
T Consensus 82 --~~~~~~~D~~~~~------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 153 (421)
T 2ih2_A 82 --WAEGILADFLLWE------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRL 153 (421)
T ss_dssp --TEEEEESCGGGCC------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHH
T ss_pred --CCcEEeCChhhcC------ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHH
Confidence 3889999988764 3578999999643221100 1111 22678999999
Q ss_pred cCCCcEEEEEeCCh
Q 024797 196 LRPGGTFIGTMPDA 209 (262)
Q Consensus 196 L~~gG~li~~~~~~ 209 (262)
|+|||.+++.+|+.
T Consensus 154 Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 154 LKPGGVLVFVVPAT 167 (421)
T ss_dssp EEEEEEEEEEEEGG
T ss_pred hCCCCEEEEEEChH
Confidence 99999999988763
No 254
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.23 E-value=1.4e-12 Score=106.42 Aligned_cols=113 Identities=14% Similarity=0.160 Sum_probs=80.1
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
...++..+...++.+|||+|||+|.++..++... .+|+|+|+|+.+++.++++... ..+++++++|+.
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~-----------~~~v~~~~~D~~ 85 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL-----------NTRVTLIHQDIL 85 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT-----------CSEEEECCSCCT
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc-----------CCceEEEECChh
Confidence 3445555555678899999999999999988765 6899999999999988776531 345899999998
Q ss_pred ccccccccCC-CCCeeEEEEcccccccCCCHHHHHHHH--------------HHHHhccCCCcEEEEEe
Q 024797 153 EVHLDKVLAD-DAPFDICSCQFAMHYSWSTEARARRAL--------------ANVSALLRPGGTFIGTM 206 (262)
Q Consensus 153 ~~~~~~~~~~-~~~fD~V~~~~~l~~~~~~~~~~~~~l--------------~~~~~~L~~gG~li~~~ 206 (262)
++++ + +++| .|+++..... +......++ +.+.++|+|||.+++.+
T Consensus 86 ~~~~-----~~~~~f-~vv~n~Py~~---~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 86 QFQF-----PNKQRY-KIVGNIPYHL---STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TTTC-----CCSSEE-EEEEECCSSS---CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred hcCc-----ccCCCc-EEEEeCCccc---cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 8775 3 3678 6666543321 122222222 55888999998876543
No 255
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.23 E-value=3.7e-11 Score=97.78 Aligned_cols=87 Identities=9% Similarity=0.179 Sum_probs=65.4
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (262)
++..++..+...++.+|||+|||+|.++..++... .+|+|+|+|+.+++.++++... ..+++++++|+
T Consensus 18 ~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~-----------~~~v~~~~~D~ 85 (244)
T 1qam_A 18 NIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD-----------HDNFQVLNKDI 85 (244)
T ss_dssp HHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT-----------CCSEEEECCCG
T ss_pred HHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc-----------CCCeEEEEChH
Confidence 44555555555678899999999999999988765 6899999999999999998752 24699999999
Q ss_pred cccccccccCCCCCeeEEEEcccc
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAM 175 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l 175 (262)
.++++. ....| .|+++...
T Consensus 86 ~~~~~~----~~~~~-~vv~nlPy 104 (244)
T 1qam_A 86 LQFKFP----KNQSY-KIFGNIPY 104 (244)
T ss_dssp GGCCCC----SSCCC-EEEEECCG
T ss_pred HhCCcc----cCCCe-EEEEeCCc
Confidence 888762 12455 45555443
No 256
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=3.4e-10 Score=92.55 Aligned_cols=91 Identities=11% Similarity=0.183 Sum_probs=70.5
Q ss_pred HHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc
Q 024797 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (262)
Q Consensus 71 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (262)
.++..++..+...++.+|||+|||+|.++..+++.. .+|+|+|++++|++.+++++.. ..+++++++|
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~-----------~~~v~~i~~D 83 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ-----------QKNITIYQND 83 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT-----------CTTEEEEESC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh-----------CCCcEEEEcc
Confidence 345667777777788999999999999999987654 6899999999999999998752 3469999999
Q ss_pred ccccccccccCCCCCeeEEEEcccc
Q 024797 151 CYEVHLDKVLADDAPFDICSCQFAM 175 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~fD~V~~~~~l 175 (262)
+..+++.... +.++|| |+++...
T Consensus 84 ~~~~~~~~~~-~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 84 ALQFDFSSVK-TDKPLR-VVGNLPY 106 (255)
T ss_dssp TTTCCGGGSC-CSSCEE-EEEECCH
T ss_pred hHhCCHHHhc-cCCCeE-EEecCCc
Confidence 9988764322 245788 5555433
No 257
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.21 E-value=1.4e-10 Score=95.58 Aligned_cols=101 Identities=13% Similarity=0.119 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeC
Q 024797 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (262)
Q Consensus 70 ~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (262)
..+++.++..+...++ +|||+|||+|.++..+++.. .+|+|+|++++|++.+++++. ..+++++++
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~------------~~~v~vi~~ 98 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLS------------GLPVRLVFQ 98 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTT------------TSSEEEEES
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcC------------CCCEEEEEC
Confidence 3456777777777788 99999999999999988764 589999999999999999875 346999999
Q ss_pred cccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHH
Q 024797 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALAN 191 (262)
Q Consensus 150 d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~ 191 (262)
|+..+++.. ...+|.|+++...+. +.+-..+++..
T Consensus 99 D~l~~~~~~----~~~~~~iv~NlPy~i---ss~il~~ll~~ 133 (271)
T 3fut_A 99 DALLYPWEE----VPQGSLLVANLPYHI---ATPLVTRLLKT 133 (271)
T ss_dssp CGGGSCGGG----SCTTEEEEEEECSSC---CHHHHHHHHHH
T ss_pred ChhhCChhh----ccCccEEEecCcccc---cHHHHHHHhcC
Confidence 999887631 136788888765542 33334444443
No 258
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.16 E-value=1.1e-10 Score=96.86 Aligned_cols=97 Identities=18% Similarity=0.162 Sum_probs=69.4
Q ss_pred hccCCCeEEEecCCC------CcchHHHHh-cC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEE-EeCcc
Q 024797 81 YARRGDVVLDLACGK------GGDLIKWDK-AK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARL-ICGDC 151 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~------G~~~~~l~~-~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~-~~~d~ 151 (262)
...++.+|||+|||+ |. ..+++ .+ .+.|+|+|+|+. .. ++++ +++|+
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v~--------------~v~~~i~gD~ 115 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------VS--------------DADSTLIGDC 115 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------BC--------------SSSEEEESCG
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------CC--------------CCEEEEECcc
Confidence 346788999999955 54 33333 23 468999999997 11 3788 99999
Q ss_pred cccccccccCCCCCeeEEEEccccccc-------CCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYS-------WSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~-------~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.+++. .++||+|+++...+.. .........+++++.++|+|||.|++.+.
T Consensus 116 ~~~~~------~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 116 ATVHT------ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp GGCCC------SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCc------cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 88764 3789999997543210 00123456899999999999999999764
No 259
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.15 E-value=6.9e-10 Score=93.23 Aligned_cols=116 Identities=12% Similarity=0.022 Sum_probs=81.0
Q ss_pred HhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (262)
+.+.++.+|||+|||+|..+..++.. ..+.|+++|+++.+++.+++++...+. .++.++++|+.++...
T Consensus 98 l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~---------~~v~~~~~D~~~~~~~ 168 (309)
T 2b9e_A 98 LDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV---------SCCELAEEDFLAVSPS 168 (309)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC---------CSEEEEECCGGGSCTT
T ss_pred hCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---------CeEEEEeCChHhcCcc
Confidence 34578899999999999999988763 457899999999999999999874332 3589999998876431
Q ss_pred cccCCCCCeeEEEEcc------cccccCC----------CH----HHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 158 KVLADDAPFDICSCQF------AMHYSWS----------TE----ARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~------~l~~~~~----------~~----~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.. ...+||.|++.. ++....+ .. ..+.++|..+.++|+ ||+|+.++.
T Consensus 169 ~~--~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 169 DP--RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp CG--GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred cc--ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 00 015799999742 1211000 10 123457888888886 999888764
No 260
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.15 E-value=7.6e-10 Score=93.96 Aligned_cols=123 Identities=20% Similarity=0.169 Sum_probs=82.2
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
.+.+||++|||+|..+..+++.+..+|++||+++.+++.|++.+...+..... ..-..+++++.+|+..+... ...+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~-dp~~~rv~vi~~Da~~~L~~-~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLD-NLKGDCYQVLIEDCIPVLKR-YAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCS-SSEETTEEEEESCHHHHHHH-HHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhcccccc-ccCCCcEEEEECcHHHHHHh-hhccC
Confidence 56799999999999999888776678999999999999999987632110000 00012699999998775321 00025
Q ss_pred CCeeEEEEcccc-ccc-----CCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 164 APFDICSCQFAM-HYS-----WSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 164 ~~fD~V~~~~~l-~~~-----~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++||+|++...- ..- +.+.+-...+++.+.++|+|||++++...+
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 789999987643 110 012233344444459999999999887543
No 261
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.14 E-value=5.7e-10 Score=96.25 Aligned_cols=113 Identities=11% Similarity=0.101 Sum_probs=81.3
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC-
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD- 162 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~- 162 (262)
.+.+|||+|||+|.++..+++ ...+|+|+|+|+.+++.|++++...+ . .+++++++|+.++... .. .
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng--------~-~~v~~~~~d~~~~~~~-~~-~~ 280 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANH--------I-DNVQIIRMAAEEFTQA-MN-GV 280 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTT--------C-CSEEEECCCSHHHHHH-HS-SC
T ss_pred CCCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcC--------C-CceEEEECCHHHHHHH-Hh-hc
Confidence 367899999999999998865 45689999999999999999876322 2 3699999998765210 00 1
Q ss_pred ------------CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHHHHHHHhh
Q 024797 163 ------------DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLRE 218 (262)
Q Consensus 163 ------------~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~~~~~~~~ 218 (262)
..+||+|++.-...- +..++.+.|+++|.++....++..+.+.+..
T Consensus 281 ~~~~~l~~~~~~~~~fD~Vv~dPPr~g----------~~~~~~~~l~~~g~ivyvsc~p~t~ard~~~ 338 (369)
T 3bt7_A 281 REFNRLQGIDLKSYQCETIFVDPPRSG----------LDSETEKMVQAYPRILYISCNPETLCKNLET 338 (369)
T ss_dssp CCCTTGGGSCGGGCCEEEEEECCCTTC----------CCHHHHHHHTTSSEEEEEESCHHHHHHHHHH
T ss_pred cccccccccccccCCCCEEEECcCccc----------cHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence 137999997643221 2244666677899998888888766655443
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.12 E-value=4.3e-10 Score=97.08 Aligned_cols=114 Identities=15% Similarity=0.040 Sum_probs=81.7
Q ss_pred CCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccc--ccc-----ccCCCCCeEEEeCcccccc
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADH--HQR-----RKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~-----~~~~~~~v~~~~~d~~~~~ 155 (262)
++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++++...... ..+ ..+. .+++++++|+..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl-~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE-KTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS-SEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC-CceEEEcCcHHHHH
Confidence 6889999999999999998875 5557999999999999999988632000 000 0011 23889999987753
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
.. ..+.||+|++.- .. ....++..+.+.|++||.++++..+..
T Consensus 126 ~~----~~~~fD~I~lDP-~~-------~~~~~l~~a~~~lk~gG~l~vt~td~~ 168 (378)
T 2dul_A 126 AE----RHRYFHFIDLDP-FG-------SPMEFLDTALRSAKRRGILGVTATDGA 168 (378)
T ss_dssp HH----STTCEEEEEECC-SS-------CCHHHHHHHHHHEEEEEEEEEEECCHH
T ss_pred Hh----ccCCCCEEEeCC-CC-------CHHHHHHHHHHhcCCCCEEEEEeecch
Confidence 21 135799999654 21 124678889999999999988865443
No 263
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.09 E-value=3.3e-10 Score=97.94 Aligned_cols=108 Identities=16% Similarity=0.082 Sum_probs=83.2
Q ss_pred cCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCC-eEEEeCccccccc-cc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFP-ARLICGDCYEVHL-DK 158 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-v~~~~~d~~~~~~-~~ 158 (262)
.++.+|||++||+|.++..++.. +.+.|+++|+++.+++.+++++... ++..+ ++++++|+.++.. .
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N--------gl~~~~v~v~~~Da~~~l~~~- 121 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN--------NIPEDRYEIHGMEANFFLRKE- 121 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT--------TCCGGGEEEECSCHHHHHHSC-
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh--------CCCCceEEEEeCCHHHHHHHh-
Confidence 46789999999999999988774 3357999999999999999998732 23334 8999999876521 1
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
..+.||+|++.- .. . ...++..+.+.|++||+++++..+..
T Consensus 122 ---~~~~fD~V~lDP-~g----~---~~~~l~~a~~~Lk~gGll~~t~t~~~ 162 (392)
T 3axs_A 122 ---WGFGFDYVDLDP-FG----T---PVPFIESVALSMKRGGILSLTATDTA 162 (392)
T ss_dssp ---CSSCEEEEEECC-SS----C---CHHHHHHHHHHEEEEEEEEEEECCHH
T ss_pred ---hCCCCcEEEECC-Cc----C---HHHHHHHHHHHhCCCCEEEEEecchh
Confidence 145799999876 21 1 23578889999999999999876654
No 264
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.09 E-value=5.8e-10 Score=90.89 Aligned_cols=74 Identities=14% Similarity=0.172 Sum_probs=61.5
Q ss_pred HHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc
Q 024797 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (262)
Q Consensus 71 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (262)
.+++.++..+...++.+|||+|||+|.++..+++.+..+|+|+|+++.|++.++++ . ..+++++++|
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~------------~~~v~~i~~D 84 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G------------DERLEVINED 84 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C------------CTTEEEECSC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c------------CCCeEEEEcc
Confidence 45666777666778899999999999999999776556899999999999999876 3 3468999999
Q ss_pred ccccccc
Q 024797 151 CYEVHLD 157 (262)
Q Consensus 151 ~~~~~~~ 157 (262)
+..+++.
T Consensus 85 ~~~~~~~ 91 (249)
T 3ftd_A 85 ASKFPFC 91 (249)
T ss_dssp TTTCCGG
T ss_pred hhhCChh
Confidence 9988764
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.03 E-value=7.1e-10 Score=100.10 Aligned_cols=138 Identities=16% Similarity=0.182 Sum_probs=91.9
Q ss_pred CccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc----C---------------CCeEEEEeCChhHHH
Q 024797 61 SPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA----K---------------IGYYVGIDIAEGSIE 121 (262)
Q Consensus 61 ~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~----~---------------~~~v~gvD~s~~~~~ 121 (262)
+..+.++.+... ++..+.+.++.+|||+|||+|.++..+++. . ...++|+|+++.++.
T Consensus 149 G~fyTP~~iv~~---mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~ 225 (541)
T 2ar0_A 149 GQYFTPRPLIKT---IIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRR 225 (541)
T ss_dssp -CCCCCHHHHHH---HHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHH
T ss_pred CeeeCCHHHHHH---HHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHH
Confidence 445555555444 333344567789999999999998876542 1 136999999999999
Q ss_pred HHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCC----------HHHHHHHHHH
Q 024797 122 DCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWST----------EARARRALAN 191 (262)
Q Consensus 122 ~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~----------~~~~~~~l~~ 191 (262)
.|+.++.-.+..+. ....+.+.++|....+.. +.++||+|+++-.+...... ......++..
T Consensus 226 lA~~nl~l~gi~~~----~~~~~~I~~gDtL~~~~~----~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~ 297 (541)
T 2ar0_A 226 LALMNCLLHDIEGN----LDHGGAIRLGNTLGSDGE----NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQH 297 (541)
T ss_dssp HHHHHHHTTTCCCB----GGGTBSEEESCTTSHHHH----TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHH
T ss_pred HHHHHHHHhCCCcc----ccccCCeEeCCCcccccc----cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHH
Confidence 99988753221100 001267889997654321 35789999998655432110 1123478999
Q ss_pred HHhccCCCcEEEEEeCCh
Q 024797 192 VSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 192 ~~~~L~~gG~li~~~~~~ 209 (262)
+.+.|+|||++++.+|+.
T Consensus 298 ~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 298 IIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp HHHHEEEEEEEEEEEEHH
T ss_pred HHHHhCCCCEEEEEecCc
Confidence 999999999999888754
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.01 E-value=3.6e-09 Score=98.27 Aligned_cols=127 Identities=14% Similarity=0.110 Sum_probs=86.7
Q ss_pred HHHHHHhccCCCeEEEecCCCCcchHHHHhc-------------------------------------------CCCeEE
Q 024797 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDKA-------------------------------------------KIGYYV 111 (262)
Q Consensus 75 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-------------------------------------------~~~~v~ 111 (262)
.++......++.+|||++||+|.++...+.. ....++
T Consensus 181 ~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~ 260 (703)
T 3v97_A 181 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFY 260 (703)
T ss_dssp HHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred HHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEE
Confidence 3444444457789999999999998876542 113699
Q ss_pred EEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHH---
Q 024797 112 GIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRA--- 188 (262)
Q Consensus 112 gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~--- 188 (262)
|+|+++.|++.|++++...+ +...+++.++|+.++... ...++||+|+++--...-+...+....+
T Consensus 261 G~Did~~av~~A~~N~~~ag--------v~~~i~~~~~D~~~~~~~---~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~ 329 (703)
T 3v97_A 261 GSDSDARVIQRARTNARLAG--------IGELITFEVKDVAQLTNP---LPKGPYGTVLSNPPYGERLDSEPALIALHSL 329 (703)
T ss_dssp EEESCHHHHHHHHHHHHHTT--------CGGGEEEEECCGGGCCCS---CTTCCCCEEEECCCCCC---CCHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHcC--------CCCceEEEECChhhCccc---cccCCCCEEEeCCCccccccchhHHHHHHHH
Confidence 99999999999999987433 344589999999886421 0233899999985443211222344444
Q ss_pred HHHHHhccCCCcEEEEEeCChHHH
Q 024797 189 LANVSALLRPGGTFIGTMPDANVI 212 (262)
Q Consensus 189 l~~~~~~L~~gG~li~~~~~~~~~ 212 (262)
+.++.+.+.|||.+++.+++.+..
T Consensus 330 l~~~lk~~~~g~~~~ilt~~~~l~ 353 (703)
T 3v97_A 330 LGRIMKNQFGGWNLSLFSASPDLL 353 (703)
T ss_dssp HHHHHHHHCTTCEEEEEESCHHHH
T ss_pred HHHHHHhhCCCCeEEEEeCCHHHH
Confidence 444555556899999999988653
No 267
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.01 E-value=8.4e-10 Score=92.24 Aligned_cols=90 Identities=16% Similarity=0.085 Sum_probs=67.3
Q ss_pred HHHHHHhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc
Q 024797 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (262)
Q Consensus 75 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (262)
.++..+...++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|++++... +.++.++++|+.+
T Consensus 17 e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~----------g~~v~~v~~d~~~ 86 (301)
T 1m6y_A 17 EVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF----------SDRVSLFKVSYRE 86 (301)
T ss_dssp HHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG----------TTTEEEEECCGGG
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEECCHHH
Confidence 3445555678899999999999999998875 3568999999999999999987631 2469999999887
Q ss_pred cccccccCCCCCeeEEEEccc
Q 024797 154 VHLDKVLADDAPFDICSCQFA 174 (262)
Q Consensus 154 ~~~~~~~~~~~~fD~V~~~~~ 174 (262)
++........++||.|++...
T Consensus 87 l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 87 ADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp HHHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHhcCCCCCCEEEEcCc
Confidence 652000001257999998653
No 268
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.00 E-value=1.4e-09 Score=98.07 Aligned_cols=133 Identities=16% Similarity=0.089 Sum_probs=88.3
Q ss_pred CccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc--------C--------CCeEEEEeCChhHHHHHH
Q 024797 61 SPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--------K--------IGYYVGIDIAEGSIEDCR 124 (262)
Q Consensus 61 ~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--------~--------~~~v~gvD~s~~~~~~a~ 124 (262)
+..+.++.+...+..+ +.+.++ +|||.+||+|.++..++.. . ...++|+|+++.++..|+
T Consensus 225 G~fyTP~~Vv~lmv~l---l~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~ 300 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEM---LEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAA 300 (544)
T ss_dssp TTTCCCHHHHHHHHHH---HCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHH
T ss_pred CeEeCCHHHHHHHHHH---HhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHH
Confidence 4455566665544443 333333 9999999999988776431 0 346999999999999999
Q ss_pred HHhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccc-------------------------cC
Q 024797 125 TRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHY-------------------------SW 179 (262)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~-------------------------~~ 179 (262)
.++.-. +...++.+.++|....+. .+..+||+|+++--+.. +.
T Consensus 301 ~Nl~l~--------gi~~~i~i~~gDtL~~~~----~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~ 368 (544)
T 3khk_A 301 MNMVIR--------GIDFNFGKKNADSFLDDQ----HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTP 368 (544)
T ss_dssp HHHHHT--------TCCCBCCSSSCCTTTSCS----CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCC
T ss_pred HHHHHh--------CCCcccceeccchhcCcc----cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccC
Confidence 887632 222334447788655432 14578999999754432 10
Q ss_pred CCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 180 STEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 180 ~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
+.....-.++..+.+.|+|||++.+.+|+.
T Consensus 369 ~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 369 PTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp CTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred CCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 001111368999999999999999988865
No 269
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.00 E-value=3.2e-09 Score=87.79 Aligned_cols=117 Identities=15% Similarity=0.179 Sum_probs=84.8
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
...+.+||-||.|.|..+..+++. +..+++.+|+++.+++.|++.+...+.. ..-..+++++.+|+..+-..
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~----~~~dpRv~v~~~Dg~~~l~~--- 153 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAG----SYDDPRFKLVIDDGVNFVNQ--- 153 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTT----GGGCTTEEEEESCTTTTTSC---
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCcccccc----ccCCCcEEEEechHHHHHhh---
Confidence 456789999999999999998875 4568999999999999999987532111 01146799999999876432
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
..++||+|++...-.......-.-..+++.+++.|+|||+++.-.
T Consensus 154 -~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 154 -TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -SSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred -ccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 467899999865321110000012468899999999999999854
No 270
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.98 E-value=5.7e-09 Score=86.35 Aligned_cols=76 Identities=13% Similarity=0.205 Sum_probs=61.2
Q ss_pred HHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCC---CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEE
Q 024797 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKI---GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI 147 (262)
Q Consensus 71 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~ 147 (262)
.+++.++..+...++.+|||||||+|.++..+++... ++|+|+|+++.|++.++++. ..+++++
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-------------~~~v~~i 95 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-------------GELLELH 95 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-------------GGGEEEE
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-------------CCCcEEE
Confidence 4566677777777889999999999999999887433 23999999999999999873 1248999
Q ss_pred eCcccccccccc
Q 024797 148 CGDCYEVHLDKV 159 (262)
Q Consensus 148 ~~d~~~~~~~~~ 159 (262)
++|+..+++...
T Consensus 96 ~~D~~~~~~~~~ 107 (279)
T 3uzu_A 96 AGDALTFDFGSI 107 (279)
T ss_dssp ESCGGGCCGGGG
T ss_pred ECChhcCChhHh
Confidence 999999887543
No 271
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.97 E-value=7.5e-09 Score=93.20 Aligned_cols=143 Identities=13% Similarity=0.121 Sum_probs=96.5
Q ss_pred hcCccccchhHHHHHHHHHHHHh-ccCCCeEEEecCCCCcchHHHHhc----CCCeEEEEeCChhHHHHHHHHhccCccc
Q 024797 59 EASPIIHLKKLNNWIKSVLVQLY-ARRGDVVLDLACGKGGDLIKWDKA----KIGYYVGIDIAEGSIEDCRTRYNGDADH 133 (262)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~----~~~~v~gvD~s~~~~~~a~~~~~~~~~~ 133 (262)
..+..+.++.+...+..++.... +.++.+|||.+||+|.++..+++. ....++|+|+++.++..|+.++.-.+..
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP 274 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC
Confidence 34566667777666555543211 346789999999999998887653 2457999999999999999886532221
Q ss_pred cccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCC-------------------HHHHHHHHHHHHh
Q 024797 134 HQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWST-------------------EARARRALANVSA 194 (262)
Q Consensus 134 ~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-------------------~~~~~~~l~~~~~ 194 (262)
..++.+.++|.....++. .+..+||+|+++--+..-+.. ...--.++..+.+
T Consensus 275 -------~~~~~I~~gDtL~~d~p~--~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~ 345 (542)
T 3lkd_A 275 -------IENQFLHNADTLDEDWPT--QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYY 345 (542)
T ss_dssp -------GGGEEEEESCTTTSCSCC--SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHH
T ss_pred -------cCccceEecceecccccc--cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHH
Confidence 134788999987652210 145789999987433211100 0001258999999
Q ss_pred ccC-CCcEEEEEeCChH
Q 024797 195 LLR-PGGTFIGTMPDAN 210 (262)
Q Consensus 195 ~L~-~gG~li~~~~~~~ 210 (262)
.|+ +||++.+.+|+.-
T Consensus 346 ~Lk~~gGr~a~VlP~g~ 362 (542)
T 3lkd_A 346 HLKQDNGVMAIVLPHGV 362 (542)
T ss_dssp TBCTTTCEEEEEEETHH
T ss_pred HhCCCceeEEEEecchH
Confidence 999 9999999888753
No 272
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.96 E-value=1.3e-09 Score=88.59 Aligned_cols=117 Identities=18% Similarity=0.196 Sum_probs=75.2
Q ss_pred HHHHHHhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc
Q 024797 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (262)
Q Consensus 75 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (262)
.+.......++.+|||+|||+|.++..++.. +...++|+|++.++....... .....++..++.++..
T Consensus 65 ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-----------~~~g~~ii~~~~~~dv 133 (277)
T 3evf_A 65 WFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-----------QSLGWNIITFKDKTDI 133 (277)
T ss_dssp HHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-----------CBTTGGGEEEECSCCT
T ss_pred HHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-----------CcCCCCeEEEecccee
Confidence 3444444567889999999999999977654 455688898885431000000 0112245556666544
Q ss_pred cccccccCCCCCeeEEEEcccccccCCCHHH---HHHHHHHHHhccCCC-cEEEEEeCC
Q 024797 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEAR---ARRALANVSALLRPG-GTFIGTMPD 208 (262)
Q Consensus 154 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~---~~~~l~~~~~~L~~g-G~li~~~~~ 208 (262)
..+ +.++||+|++..+.+ .-....| ...+++.+.++|+|| |.+++.+..
T Consensus 134 ~~l-----~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 134 HRL-----EPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TTS-----CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred hhc-----CCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 444 567899999988665 2001112 123578899999999 999999876
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.95 E-value=1.6e-09 Score=88.71 Aligned_cols=82 Identities=15% Similarity=0.012 Sum_probs=61.4
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCCh-------hHHHHHHHHhccCccccccccCCCCCeEEEeCccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAE-------GSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~-------~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (262)
..++.+|||+|||+|.++..++.. ..+|+|+|+|+ .+++.|+++.... +...+++++++|+.++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~--------~~~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQ--------DTAARINLHFGNAAEQ 151 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHH--------HHHTTEEEEESCHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhh--------CCccCeEEEECCHHHH
Confidence 346789999999999999988775 45899999999 9999998765421 1123499999998774
Q ss_pred -c-cccccCCC--CCeeEEEEcccccc
Q 024797 155 -H-LDKVLADD--APFDICSCQFAMHY 177 (262)
Q Consensus 155 -~-~~~~~~~~--~~fD~V~~~~~l~~ 177 (262)
+ + ++ ++||+|+++..+.+
T Consensus 152 l~~~-----~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 152 MPAL-----VKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHH-----HHHHCCCSEEEECCCC--
T ss_pred HHhh-----hccCCCccEEEECCCCCC
Confidence 2 2 23 68999999876654
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.93 E-value=1.8e-09 Score=88.11 Aligned_cols=91 Identities=8% Similarity=-0.005 Sum_probs=65.2
Q ss_pred HHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCe--EEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEe
Q 024797 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGY--YVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC 148 (262)
Q Consensus 71 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~--v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~ 148 (262)
.++..++..+...++.+|||+|||+|.++. +.. . .+ |+|+|+++.|++.++++... ..++++++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~-----------~~~v~~i~ 73 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFL-----------GPKLTIYQ 73 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTT-----------GGGEEEEC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhcc-----------CCceEEEE
Confidence 345566666666788899999999999999 643 2 46 99999999999999987652 13599999
Q ss_pred CcccccccccccCCCCCeeEEEEcccc
Q 024797 149 GDCYEVHLDKVLADDAPFDICSCQFAM 175 (262)
Q Consensus 149 ~d~~~~~~~~~~~~~~~fD~V~~~~~l 175 (262)
+|+..+++.......+..+.|+++...
T Consensus 74 ~D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 74 QDAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp SCGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred CchhhCCHHHhhcccCCceEEEECCCC
Confidence 999887753211001234677666544
No 275
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.88 E-value=4.6e-08 Score=90.43 Aligned_cols=142 Identities=15% Similarity=0.061 Sum_probs=88.4
Q ss_pred cCccccchhHHHHHHHHHHHHhc---cCCCeEEEecCCCCcchHHHHhcC----CCeEEEEeCChhHHHHH--HHHhccC
Q 024797 60 ASPIIHLKKLNNWIKSVLVQLYA---RRGDVVLDLACGKGGDLIKWDKAK----IGYYVGIDIAEGSIEDC--RTRYNGD 130 (262)
Q Consensus 60 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~----~~~v~gvD~s~~~~~~a--~~~~~~~ 130 (262)
.+..+..+.+...+..+...... .++.+|||+|||+|.++..++... ...++|+|+++.+++.| +..+...
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 34455566666665555222222 257799999999999998876532 24699999999999999 4433210
Q ss_pred ccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHH-------------------------HH
Q 024797 131 ADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEA-------------------------RA 185 (262)
Q Consensus 131 ~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~-------------------------~~ 185 (262)
... .+ .....+...|+...... ..++||+|+++--+........ ..
T Consensus 374 ~Ll----hG-i~~~~I~~dD~L~~~~~----~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy 444 (878)
T 3s1s_A 374 QLV----SS-NNAPTITGEDVCSLNPE----DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVE 444 (878)
T ss_dssp TTC----BT-TBCCEEECCCGGGCCGG----GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHH
T ss_pred hhh----cC-CCcceEEecchhccccc----ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchH
Confidence 000 00 11134455555543211 3578999999865521111111 13
Q ss_pred HHHHHHHHhccCCCcEEEEEeCChH
Q 024797 186 RRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 186 ~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
..++..+.+.|++||++.+.+|+.-
T Consensus 445 ~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 445 ALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp HHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred HHHHHHHHHhcCCCcEEEEEEChHH
Confidence 3478889999999999999998763
No 276
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.86 E-value=2.1e-08 Score=78.54 Aligned_cols=104 Identities=8% Similarity=-0.000 Sum_probs=73.0
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCC--CCCeEEEeCcccccc-----
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF--SFPARLICGDCYEVH----- 155 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~~~~----- 155 (262)
.+..+|||+||| .-+..+++...++|+.+|.+++..+.|++.+... ++ ..+++++.+|+.+..
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~--------g~~~~~~I~~~~gda~~~~~wg~p 98 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAAN--------PPAEGTEVNIVWTDIGPTGDWGHP 98 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHS--------CCCTTCEEEEEECCCSSBCGGGCB
T ss_pred hCCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHc--------CCCCCCceEEEEeCchhhhccccc
Confidence 457799999995 4455555433579999999999999999988743 23 446899999975420
Q ss_pred --------ccc----c--cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 --------LDK----V--LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 --------~~~----~--~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
+.. . ....++||+|++.+.. ....+..+.+.|+|||++++.
T Consensus 99 ~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 99 VSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp SSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEET
T ss_pred ccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEEe
Confidence 100 0 0023789999988742 124556677999999999874
No 277
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.85 E-value=5.4e-09 Score=95.11 Aligned_cols=102 Identities=12% Similarity=0.084 Sum_probs=73.0
Q ss_pred CCeEEEecCCCCcchHHHHh---cCCC--eEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc
Q 024797 85 GDVVLDLACGKGGDLIKWDK---AKIG--YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~---~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (262)
...|||+|||+|-+....++ .... +|++||-|+ +...|++... .+++...|+++++|++++.+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~--------~N~~~dkVtVI~gd~eev~L--- 425 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQ--------FEEWGSQVTVVSSDMREWVA--- 425 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHH--------HHTTGGGEEEEESCTTTCCC---
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHH--------hccCCCeEEEEeCcceeccC---
Confidence 35799999999988555444 2222 689999997 6667777655 24567789999999999875
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEE
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li 203 (262)
++++|+||+=.. .+++.. +....++....+.|||||.++
T Consensus 426 ---PEKVDIIVSEwM-G~fLl~-E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 426 ---PEKADIIVSELL-GSFADN-ELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ---SSCEEEEECCCC-BTTBGG-GCHHHHHHHHGGGEEEEEEEE
T ss_pred ---CcccCEEEEEcC-cccccc-cCCHHHHHHHHHhcCCCcEEc
Confidence 578999997431 111111 223467888999999999976
No 278
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.82 E-value=4.5e-09 Score=85.46 Aligned_cols=117 Identities=19% Similarity=0.205 Sum_probs=74.5
Q ss_pred HHHHHHhccCCCeEEEecCCCCcchHHHHh-cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc
Q 024797 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDK-AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (262)
Q Consensus 75 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (262)
.+.......++.+|||+|||+|.++..++. .+...++|+|++..+...+... .....++.....++..
T Consensus 81 ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-----------~~~g~~ii~~~~~~dv 149 (282)
T 3gcz_A 81 WMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-----------TTLGWNLIRFKDKTDV 149 (282)
T ss_dssp HHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-----------CBTTGGGEEEECSCCG
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-----------ccCCCceEEeeCCcch
Confidence 344444567888999999999999998764 4555799999987642211100 0112233334433322
Q ss_pred cccccccCCCCCeeEEEEcccccccCC---CHHHHHHHHHHHHhccCCC--cEEEEEeCC
Q 024797 154 VHLDKVLADDAPFDICSCQFAMHYSWS---TEARARRALANVSALLRPG--GTFIGTMPD 208 (262)
Q Consensus 154 ~~~~~~~~~~~~fD~V~~~~~l~~~~~---~~~~~~~~l~~~~~~L~~g--G~li~~~~~ 208 (262)
..+ +..++|+|+|..+.+ .-. +......++.-+.++|+|| |.|++.+..
T Consensus 150 ~~l-----~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 150 FNM-----EVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp GGS-----CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred hhc-----CCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 223 568899999998776 211 1111224577788999999 999999876
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.81 E-value=7e-09 Score=94.43 Aligned_cols=108 Identities=15% Similarity=0.011 Sum_probs=72.8
Q ss_pred CCeEEEecCCCCcchHHHHhc--------------CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc
Q 024797 85 GDVVLDLACGKGGDLIKWDKA--------------KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~~--------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (262)
+..|||+|||+|-++...+.. ...+|++||.|+.++...+.+.. .++...|+++.+|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~---------Ng~~d~VtVI~gd 480 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV---------RTWKRRVTIIESD 480 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH---------HTTTTCSEEEESC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh---------cCCCCeEEEEeCc
Confidence 458999999999886543221 12389999999977765554433 2456679999999
Q ss_pred ccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEE
Q 024797 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (262)
Q Consensus 151 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li 203 (262)
++++.++......+++|+|++=.. -++. ..+.....|..+.+.|+|||.++
T Consensus 481 ~eev~lp~~~~~~ekVDIIVSElm-Gsfl-~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 481 MRSLPGIAKDRGFEQPDIIVSELL-GSFG-DNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp GGGHHHHHHHTTCCCCSEEEECCC-BTTB-GGGSHHHHHHTTGGGSCTTCEEE
T ss_pred hhhcccccccCCCCcccEEEEecc-cccc-chhccHHHHHHHHHhCCCCcEEE
Confidence 998865100001578999997542 1211 11334567788889999999876
No 280
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.76 E-value=4.3e-08 Score=84.09 Aligned_cols=136 Identities=12% Similarity=0.066 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHhccC-----CCeEEEecCCCCcchHHHHhc----------------CCCeEEEEeCChhHHHHHHHHhc
Q 024797 70 NNWIKSVLVQLYARR-----GDVVLDLACGKGGDLIKWDKA----------------KIGYYVGIDIAEGSIEDCRTRYN 128 (262)
Q Consensus 70 ~~~~~~~l~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~----------------~~~~v~gvD~s~~~~~~a~~~~~ 128 (262)
..++...+..+.... ..+|+|+|||+|..+..++.. +.-+|+.-|+........-+.+.
T Consensus 33 ~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 33 LHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp HHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred HHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 344454555444332 468999999999988776220 22257788887777665555444
Q ss_pred cCcccc---ccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCH-----------------------
Q 024797 129 GDADHH---QRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTE----------------------- 182 (262)
Q Consensus 129 ~~~~~~---~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~----------------------- 182 (262)
...... ........+--|..+....+- ..++|+++||+|+++.++||+-..+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy--~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~ 190 (374)
T 3b5i_A 113 PLVSNTCMEECLAADGNRSYFVAGVPGSFY--RRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGE 190 (374)
T ss_dssp CBCCCC--CCC---CCCBCSEEEEEESCTT--SCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCH
T ss_pred hhhhhcchhhhccccCCCceEEEecChhhh--cccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCH
Confidence 210000 000000001123333222211 1123789999999999999973211
Q ss_pred -----------HHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 183 -----------ARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 183 -----------~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.|...+|+..++.|+|||.+++++.
T Consensus 191 ~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 191 KTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 2677789999999999999999874
No 281
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.71 E-value=5.5e-08 Score=79.51 Aligned_cols=86 Identities=15% Similarity=0.134 Sum_probs=66.8
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (262)
++.++..+.+.++..+||++||.|.++..+++. .++|+|+|.++.+++.|++ +. ..++.++++++.
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~------------~~rv~lv~~~f~ 76 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LH------------LPGLTVVQGNFR 76 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TC------------CTTEEEEESCGG
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hc------------cCCEEEEECCcc
Confidence 445666666778899999999999999999876 6699999999999999998 75 146999999998
Q ss_pred ccccccccCCCCCeeEEEEc
Q 024797 153 EVHLDKVLADDAPFDICSCQ 172 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~ 172 (262)
+++..-.....+++|.|++.
T Consensus 77 ~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 77 HLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp GHHHHHHHTTCSCEEEEEEE
T ss_pred hHHHHHHHcCCCCcCEEEeC
Confidence 76421000023579999974
No 282
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.69 E-value=1.3e-08 Score=88.15 Aligned_cols=78 Identities=19% Similarity=0.095 Sum_probs=59.9
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-ccccccCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKVLAD 162 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~ 162 (262)
++.+|||+|||+|..+..+++. ..+|+|+|+|+.|++.|++++.... .+. .+++++++|+.+. +.. +
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~------~gl-~~i~~i~~Da~~~L~~~----~ 160 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLL------NEG-KDVNILTGDFKEYLPLI----K 160 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHS------CTT-CEEEEEESCGGGSHHHH----H
T ss_pred CCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhc------cCC-CcEEEEECcHHHhhhhc----c
Confidence 4889999999999998887654 4589999999999999999886320 011 4599999999874 210 1
Q ss_pred CCCeeEEEEcc
Q 024797 163 DAPFDICSCQF 173 (262)
Q Consensus 163 ~~~fD~V~~~~ 173 (262)
+++||+|+++-
T Consensus 161 ~~~fDvV~lDP 171 (410)
T 3ll7_A 161 TFHPDYIYVDP 171 (410)
T ss_dssp HHCCSEEEECC
T ss_pred CCCceEEEECC
Confidence 35799999863
No 283
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.66 E-value=1.6e-07 Score=80.07 Aligned_cols=121 Identities=17% Similarity=0.131 Sum_probs=85.9
Q ss_pred HhccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 80 LYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
+.+.++.+|||++||+|.-+..++.. ..+.++++|+++.-+...++++...+..+ .....++.+.+.|...++..
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~---~~~~~~v~v~~~D~~~~~~~- 219 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEE---IRDGNQVRVTSWDGRKWGEL- 219 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTT---TTTSSSEEEECCCGGGHHHH-
T ss_pred hCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhh---hccCCceEEEeCchhhcchh-
Confidence 45678999999999999988888764 33469999999999999888776433221 11234688889998776431
Q ss_pred ccCCCCCeeEEEEcccccc----c--------C-CCH-------HHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 159 VLADDAPFDICSCQFAMHY----S--------W-STE-------ARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~----~--------~-~~~-------~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
..+.||.|++..-..- . + ... ..+.++|..+.+.|||||+|+-++.
T Consensus 220 ---~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 220 ---EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp ---STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred ---ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 4578999997432110 0 0 011 2346788999999999999988875
No 284
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.66 E-value=2.8e-07 Score=78.58 Aligned_cols=121 Identities=20% Similarity=0.176 Sum_probs=82.3
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.++.+||-+|.|.|..+.++++.+..+++.||+++.+++.|++.+......... ..-..+++++.+|+..+-. .....
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d-~pr~~rv~vii~Da~~fl~-~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLD-NLKGDCYQVLIEDCIPVLK-RYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCS-SSEETTEEEEESCHHHHHH-HHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhc-cccccceeeehHHHHHHHH-hhhhc
Confidence 356799999999999999998877778999999999999999987632111000 0012458899999865421 00002
Q ss_pred CCCeeEEEEccccccc------CCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 163 DAPFDICSCQFAMHYS------WSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~------~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.++||+|++...-... ......-..+++.++++|+|||+++.-
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 4689999987422110 001223467899999999999999863
No 285
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.58 E-value=5.8e-07 Score=77.17 Aligned_cols=110 Identities=14% Similarity=0.023 Sum_probs=70.5
Q ss_pred CCeEEEecCCCCcchHHHHhc------------------CCCeEEEEeCC-----------hhHHHHHHHHhccCccccc
Q 024797 85 GDVVLDLACGKGGDLIKWDKA------------------KIGYYVGIDIA-----------EGSIEDCRTRYNGDADHHQ 135 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~~------------------~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~~ 135 (262)
..+|+|+|||+|..+..++.. +.-.|+..|+. +.+.+.+++...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g------- 125 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG------- 125 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC-------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc-------
Confidence 468999999999988866542 11247788877 333333322211
Q ss_pred cccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCH---------------------------------
Q 024797 136 RRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTE--------------------------------- 182 (262)
Q Consensus 136 ~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~--------------------------------- 182 (262)
...+.-|+.+....+ -..++|++++|+|+++.++||+-..+
T Consensus 126 ----~~~~~~f~~gvpgSF--y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Q 199 (384)
T 2efj_A 126 ----RKIGSCLIGAMPGSF--YSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQ 199 (384)
T ss_dssp ----CCTTSEEEEECCSCT--TSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHH
T ss_pred ----CCCCceEEEecchhh--hhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHH
Confidence 011234555544432 12234899999999999999873211
Q ss_pred --HHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 183 --ARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 183 --~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.|...+|+..++.|+|||++++++.
T Consensus 200 f~~D~~~FL~~Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 200 FTKDFTTFLRIHSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhccCCeEEEEEe
Confidence 1334458888999999999999874
No 286
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.54 E-value=4.3e-07 Score=81.74 Aligned_cols=137 Identities=16% Similarity=0.123 Sum_probs=90.0
Q ss_pred cCccccchhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc---C-----------CCeEEEEeCChhHHHHHHH
Q 024797 60 ASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA---K-----------IGYYVGIDIAEGSIEDCRT 125 (262)
Q Consensus 60 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~-----------~~~v~gvD~s~~~~~~a~~ 125 (262)
.+..+.++.+...+ +..+.+.++.+|+|.+||+|.++...... . ...++|+|+++.+...|+.
T Consensus 196 ~GqfyTP~~Vv~lm---v~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~m 272 (530)
T 3ufb_A 196 SGEFYTPRPVVRFM---VEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQM 272 (530)
T ss_dssp CCCCCCCHHHHHHH---HHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHH
T ss_pred CceECCcHHHHHHH---HHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHH
Confidence 46677777775554 44455677889999999999998765431 1 2359999999999999988
Q ss_pred HhccCccccccccCCCCCeEEEeCcccccccccccCCCCCeeEEEEcccccccC------------CCHHHHHHHHHHHH
Q 024797 126 RYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSW------------STEARARRALANVS 193 (262)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~------------~~~~~~~~~l~~~~ 193 (262)
++--.+. ....+.++|....+..... +..+||+|+++--+.--+ ...+....++..+.
T Consensus 273 Nl~lhg~---------~~~~I~~~dtL~~~~~~~~-~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l 342 (530)
T 3ufb_A 273 NLLLHGL---------EYPRIDPENSLRFPLREMG-DKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIM 342 (530)
T ss_dssp HHHHHTC---------SCCEEECSCTTCSCGGGCC-GGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHH
T ss_pred HHHhcCC---------ccccccccccccCchhhhc-ccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHH
Confidence 7652211 1245667776554432111 345799999986442110 11112245677788
Q ss_pred hccC-------CCcEEEEEeCCh
Q 024797 194 ALLR-------PGGTFIGTMPDA 209 (262)
Q Consensus 194 ~~L~-------~gG~li~~~~~~ 209 (262)
+.|+ +||++.+.+|+.
T Consensus 343 ~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 343 RKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp HHBCCTTSSSSSCCEEEEEEEHH
T ss_pred HHhhhhhhccCCCceEEEEecch
Confidence 8776 799999988864
No 287
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.51 E-value=3.3e-07 Score=75.00 Aligned_cols=110 Identities=17% Similarity=0.184 Sum_probs=68.7
Q ss_pred ccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|||+||++|.++..+++. +...|+|+|+...+...... . .....++.....++....+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~----------~~~~~~iv~~~~~~di~~l---- 143 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-M----------QTLGWNIVKFKDKSNVFTM---- 143 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-C----------CBTTGGGEEEECSCCTTTS----
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-c----------cccCCceEEeecCceeeec----
Confidence 457889999999999999998763 45568999997643110000 0 0001122222322222222
Q ss_pred CCCCCeeEEEEcccccccCC---CHHHHHHHHHHHHhccCCC-cEEEEEeCC
Q 024797 161 ADDAPFDICSCQFAMHYSWS---TEARARRALANVSALLRPG-GTFIGTMPD 208 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~---~~~~~~~~l~~~~~~L~~g-G~li~~~~~ 208 (262)
+.+++|+|++..+.+ .-. +......++.-+.++|+|| |.|++.+..
T Consensus 144 -~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 144 -PTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp -CCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred -CCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 467899999988766 210 1111234577788999999 999999876
No 288
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.49 E-value=1.2e-07 Score=77.45 Aligned_cols=92 Identities=9% Similarity=-0.058 Sum_probs=62.0
Q ss_pred HhccCC--CeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccC-CCCCeEEEeCccccccc
Q 024797 80 LYARRG--DVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKK-FSFPARLICGDCYEVHL 156 (262)
Q Consensus 80 ~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~ 156 (262)
+...++ .+|||+|||+|..+..++..+. +|+++|+++.+++.+++.+..... +....+ ...+++++++|+.++..
T Consensus 82 l~l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~-~~~~~~~l~~~i~~~~~D~~~~L~ 159 (258)
T 2oyr_A 82 VGIKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYA-DAEIGGWLQERLQLIHASSLTALT 159 (258)
T ss_dssp TTCBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHH-CTTTHHHHHHHEEEEESCHHHHST
T ss_pred hcccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHh-hHhhhhhhhcCEEEEECCHHHHHH
Confidence 334566 8999999999999999887644 799999999887776665431100 000001 12358999999876421
Q ss_pred ccccCCCCCeeEEEEcccccc
Q 024797 157 DKVLADDAPFDICSCQFAMHY 177 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~ 177 (262)
. ...+||+|++.-.+.+
T Consensus 160 ~----~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 160 D----ITPRPQVVYLDPMFPH 176 (258)
T ss_dssp T----CSSCCSEEEECCCCCC
T ss_pred h----CcccCCEEEEcCCCCC
Confidence 0 1246999999877754
No 289
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.48 E-value=6.1e-07 Score=71.87 Aligned_cols=108 Identities=21% Similarity=0.203 Sum_probs=65.7
Q ss_pred hccCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCe---EEEeC-cccccc
Q 024797 81 YARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPA---RLICG-DCYEVH 155 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v---~~~~~-d~~~~~ 155 (262)
...++.+|||+||++|..+...+.. ..+.|.|.++..+. . ... .......+ .+.++ |+.++
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-----~~P-------~~~~~~Gv~~i~~~~G~Df~~~- 135 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-----EEP-------MLMQSYGWNIVTMKSGVDVFYK- 135 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-----CCC-------CCCCSTTGGGEEEECSCCGGGS-
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-----cCC-------CcccCCCceEEEeeccCCccCC-
Confidence 4678999999999999999987653 13333444443321 0 000 00000223 45557 98774
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHH---HHHHHHHhccCCCc-EEEEEeCCh
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARAR---RALANVSALLRPGG-TFIGTMPDA 209 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~---~~l~~~~~~L~~gG-~li~~~~~~ 209 (262)
+..++|+|+|..+-. .-...-|.. .+|.-+.++|+||| .+++.+-..
T Consensus 136 ------~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 136 ------PSEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp ------CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred ------CCCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 356899999988654 211111221 25777889999999 899888654
No 290
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.43 E-value=1.8e-06 Score=70.43 Aligned_cols=126 Identities=19% Similarity=0.209 Sum_probs=78.5
Q ss_pred HHHHHHHhccCCCeEEEecCCCCcchHHHHh-cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeC-cc
Q 024797 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDK-AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG-DC 151 (262)
Q Consensus 74 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~-d~ 151 (262)
..+.......++.+|||+||++|.++...+. .+...|+|+|+-..-.+.- .....+ . ...|.++.+ |+
T Consensus 84 ~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql--------~-w~lV~~~~~~Dv 153 (321)
T 3lkz_A 84 RWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSY--------G-WNIVTMKSGVDV 153 (321)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBT--------T-GGGEEEECSCCT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhc--------C-CcceEEEeccCH
Confidence 3344444557888999999999999997665 3455799999976311000 000000 0 112778877 87
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHHHH---HHHHHHHHhccCCC-cEEEEEeCCh--HHHHHHHh
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARA---RRALANVSALLRPG-GTFIGTMPDA--NVIIKKLR 217 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~---~~~l~~~~~~L~~g-G~li~~~~~~--~~~~~~~~ 217 (262)
..++ ..++|+|+|..+ .......-+. ..+|.-+-++|++| |-+++.+-.+ ..+++.+.
T Consensus 154 ~~l~-------~~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~ 217 (321)
T 3lkz_A 154 FYRP-------SECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKME 217 (321)
T ss_dssp TSSC-------CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHH
T ss_pred hhCC-------CCCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHH
Confidence 6664 366999999887 4321111122 23677778999998 8999888655 54444443
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.41 E-value=1.7e-06 Score=73.50 Aligned_cols=73 Identities=12% Similarity=0.136 Sum_probs=56.8
Q ss_pred ccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 82 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..+|.+|||+||++|.++..+++.+ +.|++||+.+ |-..... ..+|+++++|+..+..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg-~~V~aVD~~~-l~~~l~~---------------~~~V~~~~~d~~~~~~----- 266 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRN-MWVYSVDNGP-MAQSLMD---------------TGQVTWLREDGFKFRP----- 266 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTT-CEEEEECSSC-CCHHHHT---------------TTCEEEECSCTTTCCC-----
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCC-CEEEEEEhhh-cChhhcc---------------CCCeEEEeCccccccC-----
Confidence 4689999999999999999987654 5899999875 3222211 3459999999988764
Q ss_pred CCCCeeEEEEccccc
Q 024797 162 DDAPFDICSCQFAMH 176 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~ 176 (262)
+.++||+|+|..+..
T Consensus 267 ~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 267 TRSNISWMVCDMVEK 281 (375)
T ss_dssp CSSCEEEEEECCSSC
T ss_pred CCCCcCEEEEcCCCC
Confidence 467899999998774
No 292
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.39 E-value=1.3e-06 Score=74.34 Aligned_cols=113 Identities=12% Similarity=0.053 Sum_probs=78.9
Q ss_pred CCeEEEecCCCCcchHHHHhc---------------CC--CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEE
Q 024797 85 GDVVLDLACGKGGDLIKWDKA---------------KI--GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI 147 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~~---------------~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~ 147 (262)
.-+|+|+||++|..+..++.. .. -.|+..|+........-+.+.... . ..+.-|+
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-~-------~~~~~f~ 123 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-D-------VDGVCFI 123 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-S-------CTTCEEE
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-c-------cCCCEEE
Confidence 357999999999987765432 11 248899999999888877765311 0 0023444
Q ss_pred eCcccccccccccCCCCCeeEEEEcccccccCCC-----------------------------HHHHHHHHHHHHhccCC
Q 024797 148 CGDCYEVHLDKVLADDAPFDICSCQFAMHYSWST-----------------------------EARARRALANVSALLRP 198 (262)
Q Consensus 148 ~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-----------------------------~~~~~~~l~~~~~~L~~ 198 (262)
.+....+ -..++|++++|+|+++.++||+-.. ..|...+|+..++.|+|
T Consensus 124 ~gvpgSF--y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~p 201 (359)
T 1m6e_X 124 NGVPGSF--YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVP 201 (359)
T ss_dssp EEEESCS--SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCT
T ss_pred Eecchhh--hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5443332 1222388999999999999987321 24667789999999999
Q ss_pred CcEEEEEeC
Q 024797 199 GGTFIGTMP 207 (262)
Q Consensus 199 gG~li~~~~ 207 (262)
||++++++.
T Consensus 202 GG~mvl~~~ 210 (359)
T 1m6e_X 202 GGRMVLTIL 210 (359)
T ss_dssp TCEEEEEEE
T ss_pred CceEEEEEe
Confidence 999999873
No 293
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.34 E-value=6.4e-06 Score=67.87 Aligned_cols=109 Identities=15% Similarity=0.086 Sum_probs=78.0
Q ss_pred cCCCeEEEecCCCCcchHHHHhc------CCCeEEEEeCChh--------------------------HHHHHHHHhccC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA------KIGYYVGIDIAEG--------------------------SIEDCRTRYNGD 130 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~------~~~~v~gvD~s~~--------------------------~~~~a~~~~~~~ 130 (262)
..+..|||+|+..|..+..++.. ..++++++|..+. .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 34679999999999877766542 2567999996432 456677776632
Q ss_pred ccccccccCC-CCCeEEEeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 131 ADHHQRRKKF-SFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 131 ~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
++ ..+++++.+|+.+.- .. .+.++||+|++..... +.....+..+...|+|||++++....
T Consensus 185 --------gl~~~~I~li~Gda~etL-~~--~~~~~~d~vfIDaD~y------~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 185 --------DLLDEQVRFLPGWFKDTL-PT--APIDTLAVLRMDGDLY------ESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp --------TCCSTTEEEEESCHHHHS-TT--CCCCCEEEEEECCCSH------HHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred --------CCCcCceEEEEeCHHHHH-hh--CCCCCEEEEEEcCCcc------ccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 33 267999999986531 11 1357899999887542 44567899999999999999996653
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.31 E-value=5.1e-06 Score=65.64 Aligned_cols=113 Identities=18% Similarity=0.227 Sum_probs=73.6
Q ss_pred HHHHHHhccCCCeEEEecCCCCcchHHHHh-cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCC-CCeEEEeC-cc
Q 024797 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDK-AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS-FPARLICG-DC 151 (262)
Q Consensus 75 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~v~~~~~-d~ 151 (262)
.+.......++.+|||+||++|.++...+. .+...|+|+|+-..-.+. + .. ...++ ..++|.++ |+
T Consensus 69 ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-----P----~~--~~s~gwn~v~fk~gvDv 137 (267)
T 3p8z_A 69 WFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-----P----VP--MSTYGWNIVKLMSGKDV 137 (267)
T ss_dssp HHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-----C----CC--CCCTTTTSEEEECSCCG
T ss_pred HHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-----c----ch--hhhcCcCceEEEeccce
Confidence 344444557888999999999999997765 345579999997632100 0 00 00111 34889999 98
Q ss_pred cccccccccCCCCCeeEEEEcccccccCCCHH-HH---HHHHHHHHhccCCCcEEEEEeCC
Q 024797 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEA-RA---RRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 152 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~-~~---~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
..++ ..++|+|+|..+=.. .++. +. ..+|+-+-++|++ |-+++.+-.
T Consensus 138 ~~~~-------~~~~DtllcDIgeSs--~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 138 FYLP-------PEKCDTLLCDIGESS--PSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp GGCC-------CCCCSEEEECCCCCC--SCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred eecC-------CccccEEEEecCCCC--CChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 6654 467999999876532 1211 22 3367777899998 788888743
No 295
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.29 E-value=1.1e-06 Score=71.58 Aligned_cols=121 Identities=12% Similarity=0.010 Sum_probs=69.9
Q ss_pred cCCCeEEEecCCCCcchHHHHh--------cC-----CCeEEEEeCCh---hHHH-----------HHHHHhccCcccc-
Q 024797 83 RRGDVVLDLACGKGGDLIKWDK--------AK-----IGYYVGIDIAE---GSIE-----------DCRTRYNGDADHH- 134 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~--------~~-----~~~v~gvD~s~---~~~~-----------~a~~~~~~~~~~~- 134 (262)
.++.+|||+|+|+|..+..+++ .+ ...++++|..+ +++. .|++.+.......
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 3557999999999987776543 22 13799999876 4444 3444332110000
Q ss_pred ----ccccCCCCCeEEEeCccccc-ccccccCCCCCeeEEEEcccccccCCCHH-HHHHHHHHHHhccCCCcEEEEEe
Q 024797 135 ----QRRKKFSFPARLICGDCYEV-HLDKVLADDAPFDICSCQFAMHYSWSTEA-RARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 135 ----~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~~~fD~V~~~~~l~~~~~~~~-~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
..-.....+++++.+|+.+. +.... .....||+|+....-.-. .++ -...++..+.+.|+|||+|+..+
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~-~~~~~~D~iflD~fsp~~--~p~lw~~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDD-SLNQKVDAWFLDGFAPAK--NPDMWTQNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCG-GGTTCEEEEEECSSCTTT--CGGGCCHHHHHHHHHHEEEEEEEEESC
T ss_pred chhheeccCCceEEEEEECcHHHHHhhccc-ccCCeEEEEEECCCCccc--ChhhcCHHHHHHHHHHcCCCcEEEEEe
Confidence 00001124578999998763 32100 001379999986421100 111 03578999999999999988533
No 296
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.26 E-value=1.8e-06 Score=63.25 Aligned_cols=87 Identities=15% Similarity=0.022 Sum_probs=56.5
Q ss_pred cCCCeEEEecCCCC-cchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGKG-GDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~G-~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|||+|||.| +.+..+++...-.|+++|+++.+++ +++.|+++....
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~------------------------~v~dDiF~P~~~---- 85 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG------------------------IVRDDITSPRME---- 85 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT------------------------EECCCSSSCCHH----
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc------------------------eEEccCCCCccc----
Confidence 35679999999999 5777776534447999999985533 578888774320
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
.-..||+|+....- .+....+.++.+.+ |.-++|..
T Consensus 86 ~Y~~~DLIYsirPP-------~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 86 IYRGAALIYSIRPP-------AEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp HHTTEEEEEEESCC-------TTTHHHHHHHHHHH--TCEEEEEC
T ss_pred ccCCcCEEEEcCCC-------HHHHHHHHHHHHHc--CCCEEEEc
Confidence 01489999875532 33444444554433 45666653
No 297
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.04 E-value=1.4e-05 Score=65.06 Aligned_cols=100 Identities=14% Similarity=0.161 Sum_probs=66.6
Q ss_pred hccCCCeEEEecC------CCCcchHHHHhcCC-CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc
Q 024797 81 YARRGDVVLDLAC------GKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (262)
Q Consensus 81 ~~~~~~~vLDiGc------G~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (262)
..+.+.+|||+|+ .+|.....-. .+. +.++++|+.+-. . .. -.++++|+..
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~VLr~~-~p~g~~VVavDL~~~~--------s------------da-~~~IqGD~~~ 163 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTAVLRQW-LPTGTLLVDSDLNDFV--------S------------DA-DSTLIGDCAT 163 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHHHHHHH-SCTTCEEEEEESSCCB--------C------------SS-SEEEESCGGG
T ss_pred eecCCCEEEeCCCCCCCCCCCcHHHHHHh-CCCCcEEEEeeCcccc--------c------------CC-CeEEEccccc
Confidence 3457899999997 5566322211 333 489999998721 0 11 2459999876
Q ss_pred cccccccCCCCCeeEEEEccccccc--CC-----CHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 154 VHLDKVLADDAPFDICSCQFAMHYS--WS-----TEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 154 ~~~~~~~~~~~~fD~V~~~~~l~~~--~~-----~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
.. ..++||+|++.++-.-. .+ ...-.+.++.-+.++|+|||.|++.+-.
T Consensus 164 ~~------~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQ 219 (344)
T 3r24_A 164 VH------TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 219 (344)
T ss_dssp EE------ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cc------cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEec
Confidence 54 35889999987632211 00 1224678888899999999999998753
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.03 E-value=1.4e-05 Score=66.91 Aligned_cols=88 Identities=15% Similarity=0.087 Sum_probs=65.1
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (262)
++.++..+.+.++..++|..||.|.++..+++. +.++|+|+|.++.+++.|+ ++. ..++++++++
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~------------~~Rv~lv~~n 112 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID------------DPRFSIIHGP 112 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC------------CTTEEEEESC
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc------------CCcEEEEeCC
Confidence 344666666788999999999999999998874 5678999999999999984 442 3568999999
Q ss_pred cccccccc-ccCCCCCeeEEEEcc
Q 024797 151 CYEVHLDK-VLADDAPFDICSCQF 173 (262)
Q Consensus 151 ~~~~~~~~-~~~~~~~fD~V~~~~ 173 (262)
+.++...- ...-.+++|.|+...
T Consensus 113 F~~l~~~L~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 113 FSALGEYVAERDLIGKIDGILLDL 136 (347)
T ss_dssp GGGHHHHHHHTTCTTCEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCcccEEEECC
Confidence 87764210 000113699999754
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.97 E-value=1.4e-05 Score=66.58 Aligned_cols=54 Identities=22% Similarity=0.332 Sum_probs=43.6
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYN 128 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~ 128 (262)
+..++... ..+++.|||++||+|..+..++..+ .+++|+|+++.+++.|++++.
T Consensus 225 ~~~~i~~~-~~~~~~vlD~f~GsGt~~~~a~~~g-~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 225 AERLVRMF-SFVGDVVLDPFAGTGTTLIAAARWG-RRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp HHHHHHHH-CCTTCEEEETTCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHH
Confidence 44444443 3688999999999999888776544 489999999999999999876
No 300
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.57 E-value=0.0023 Score=53.46 Aligned_cols=114 Identities=12% Similarity=0.000 Sum_probs=80.3
Q ss_pred CCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc----
Q 024797 85 GDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL---- 160 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~---- 160 (262)
...|+++|||-=.....+.......++-+| -+..++..++.+.+.+.. ...+..++.+|+.+ .+...+
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~------~~~~~~~v~~Dl~d-~~~~~l~~~g 174 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVT------PTADRREVPIDLRQ-DWPPALRSAG 174 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCC------CSSEEEEEECCTTS-CHHHHHHHTT
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCC------CCCCeEEEecchHh-hHHHHHHhcc
Confidence 457999999975443333211234789999 488999888888632211 24457889999876 432111
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+....--++++-++++|+ +.+....+++.+...+.||+.++++...
T Consensus 175 ~d~~~Pt~~i~Egvl~Yl--~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 175 FDPSARTAWLAEGLLMYL--PATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp CCTTSCEEEEECSCGGGS--CHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCCCCCEEEEEechHhhC--CHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 123445788888999998 7788999999999999999999998754
No 301
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.55 E-value=9.7e-05 Score=60.41 Aligned_cols=107 Identities=7% Similarity=-0.133 Sum_probs=78.1
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
.+..+||+-+|+|.++.+++. +..+++.+|.++..++..++++.. ..++++++.|....- .....+.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~-----------~~~~~V~~~D~~~~L-~~l~~~~ 157 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF-----------NKKVYVNHTDGVSKL-NALLPPP 157 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT-----------TSCEEEECSCHHHHH-HHHCSCT
T ss_pred cCCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc-----------CCcEEEEeCcHHHHH-HHhcCCC
Confidence 456799999999999999876 447899999999999999888752 356899999975421 1111144
Q ss_pred CCeeEEEEcccccccCCCHHHHHHHHHHHHh--ccCCCcEEEEEeC
Q 024797 164 APFDICSCQFAMHYSWSTEARARRALANVSA--LLRPGGTFIGTMP 207 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~--~L~~gG~li~~~~ 207 (262)
.+||+|++.-....- .+..+++..+.+ .+.++|.+++=-|
T Consensus 158 ~~fdLVfiDPPYe~k----~~~~~vl~~L~~~~~r~~~Gi~v~WYP 199 (283)
T 2oo3_A 158 EKRGLIFIDPSYERK----EEYKEIPYAIKNAYSKFSTGLYCVWYP 199 (283)
T ss_dssp TSCEEEEECCCCCST----THHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCccEEEECCCCCCC----cHHHHHHHHHHHhCccCCCeEEEEEEe
Confidence 579999998766521 356666666655 4578999877544
No 302
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.50 E-value=0.0027 Score=53.52 Aligned_cols=120 Identities=14% Similarity=0.103 Sum_probs=81.3
Q ss_pred cCCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCcccc-------cc-----ccCCCCCeEEEeC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHH-------QR-----RKKFSFPARLICG 149 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-------~~-----~~~~~~~v~~~~~ 149 (262)
.+...|+.+|||.......+... +...++-||. +++++.-++.+.+.+... .. ......+..++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 35678999999999887777553 4446888888 778777777765431100 00 0001356889999
Q ss_pred cccccccc----cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEE-EEe
Q 024797 150 DCYEVHLD----KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI-GTM 206 (262)
Q Consensus 150 d~~~~~~~----~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li-~~~ 206 (262)
|+.+.... ..........++++-+++.|+ +++...++++.+.+.. |+|.++ +..
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL--~~~~~~~ll~~ia~~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYM--HNNESQLLINTIMSKF-SHGLWISYDP 233 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGS--CHHHHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCC--CHHHHHHHHHHHHhhC-CCcEEEEEec
Confidence 99875431 111123567899999999999 8899999999999987 666654 443
No 303
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.50 E-value=3.9e-05 Score=80.30 Aligned_cols=103 Identities=16% Similarity=0.113 Sum_probs=53.4
Q ss_pred cCCCeEEEecCCCCcchHHHHhcC------CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-c
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAK------IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-H 155 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~ 155 (262)
.+..+|||+|.|+|..+..++..- ...++.+|+|+...+.|++++.. ..+.....|..+. +
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~------------~di~~~~~d~~~~~~ 1306 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ------------LHVTQGQWDPANPAP 1306 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH------------HTEEEECCCSSCCCC
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh------------ccccccccccccccc
Confidence 356799999999998776654421 23689999999888888877651 1122222232221 1
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
+ ....||+|++.+++|-. .+....+.++++.|+|||++++..
T Consensus 1307 ~-----~~~~ydlvia~~vl~~t----~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1307 G-----SLGKADLLVCNCALATL----GDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp ----------CCEEEEECC------------------------CCEEEEEE
T ss_pred C-----CCCceeEEEEccccccc----ccHHHHHHHHHHhcCCCcEEEEEe
Confidence 1 24579999999999743 677889999999999999988754
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.49 E-value=0.00024 Score=57.87 Aligned_cols=54 Identities=22% Similarity=0.311 Sum_probs=43.0
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYN 128 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~ 128 (262)
++.++.. ...+++.|||..||+|..+....+. ..+++|+|+++.+++.|++++.
T Consensus 202 ~~~~i~~-~~~~~~~vlD~f~GsGtt~~~a~~~-gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 202 IERIIRA-SSNPNDLVLDCFMGSGTTAIVAKKL-GRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp HHHHHHH-HCCTTCEEEESSCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHH-hCCCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHH
Confidence 3444433 3478899999999999888776544 4589999999999999999986
No 305
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.46 E-value=0.0004 Score=58.98 Aligned_cols=60 Identities=17% Similarity=0.141 Sum_probs=49.8
Q ss_pred CCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
++..|||||.|.|.++..++.. ...+|+++|+++.++...++... ..+++++.+|+..+.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~------------~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE------------GSPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT------------TSSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc------------CCCEEEEECCccchh
Confidence 3589999999999999999874 45689999999999998887652 346899999997654
No 306
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.13 E-value=0.0038 Score=53.51 Aligned_cols=108 Identities=16% Similarity=0.153 Sum_probs=70.8
Q ss_pred CeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc---cCC
Q 024797 86 DVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV---LAD 162 (262)
Q Consensus 86 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~---~~~ 162 (262)
.++||+.||.|.++..+...+...+.++|+++.+++..+.++. ...++++|+.++..... ...
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~--------------~~~~~~~DI~~~~~~~~~~~~~~ 68 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP--------------RSLHVQEDVSLLNAEIIKGFFKN 68 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT--------------TSEEECCCGGGCCHHHHHHHHCS
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC--------------CCceEecChhhcCHHHHHhhccc
Confidence 4799999999999998877777678899999999998888765 26678899887643211 012
Q ss_pred CCCeeEEEEcccccccCC----CH-HHHHHHHH---HHHhccCCCcEEEEEeC
Q 024797 163 DAPFDICSCQFAMHYSWS----TE-ARARRALA---NVSALLRPGGTFIGTMP 207 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~----~~-~~~~~~l~---~~~~~L~~gG~li~~~~ 207 (262)
...+|+|+...-.+-+-. .. +....++. ++.+.++|.-+++=.++
T Consensus 69 ~~~~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~ 121 (376)
T 3g7u_A 69 DMPIDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVP 121 (376)
T ss_dssp CCCCCEEEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECT
T ss_pred CCCeeEEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecch
Confidence 467999998765443300 00 11223333 34455678655554444
No 307
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.01 E-value=0.041 Score=44.42 Aligned_cols=164 Identities=12% Similarity=0.150 Sum_probs=90.8
Q ss_pred cchhHHHHHHHHHhhhhccccHhhhhcCccccch-hHHHHHH--HHHHHHhccCCCeEEEecCCCCcchHHHHh------
Q 024797 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHLK-KLNNWIK--SVLVQLYARRGDVVLDLACGKGGDLIKWDK------ 104 (262)
Q Consensus 34 ~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~------ 104 (262)
.......+++.+.+.............-+.+..+ .+..++. .+...+ ..-+..|+|+||-.|..+..++.
T Consensus 17 ~~~~~~~~~l~~~~~~~~~~~~e~l~~~~~~~~~~~l~~~l~~~~l~~~i-~~vpG~ivE~GV~rG~S~~~~a~~~~~l~ 95 (257)
T 3tos_A 17 PEETETTQRLTKLLTNSPIPTEELVNNLPLFLRRHQMTDLLSMDALYRQV-LDVPGVIMEFGVRFGRHLGTFAALRGVYE 95 (257)
T ss_dssp HHHHHHHHHHHHHHHTCCSCGGGGGGCGGGGCCHHHHHHHHHHHHHHHHT-TTSCSEEEEECCTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcCCCChHHHHHhHHhhhhHHHHHHHHHHHHHHHHh-hCCCCeEEEEecccCHHHHHHHHHHHHhc
Confidence 3445566777777766555444433333332221 2222222 112222 23456899999999987776543
Q ss_pred --cCCCeEEEEeCChhHHH------------------------HHHHHhccCccccccccCC-CCCeEEEeCcccccccc
Q 024797 105 --AKIGYYVGIDIAEGSIE------------------------DCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLD 157 (262)
Q Consensus 105 --~~~~~v~gvD~s~~~~~------------------------~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~ 157 (262)
....+++|+|.=+.+-+ ..++.+.. ..+.+..+. ..+++++.+++.+.- +
T Consensus 96 ~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~--~~~~~~~g~~~~~i~li~G~~~dTL-~ 172 (257)
T 3tos_A 96 PYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDA--HECSDFFGHVTQRSVLVEGDVRETV-P 172 (257)
T ss_dssp TTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHH--HHTTSTTTTSCCSEEEEESCHHHHH-H
T ss_pred ccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHH--HhhhhhcCCCCCcEEEEEecHHHHH-H
Confidence 13467999992221111 01110000 000001122 367999999986531 1
Q ss_pred cc--cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 158 KV--LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 158 ~~--~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.. ..+..+||+|.+..-. | +.....+..+...|+|||++++...
T Consensus 173 ~~l~~~~~~~~dlv~ID~D~-Y-----~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 173 RYLAENPQTVIALAYFDLDL-Y-----EPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp HHHHHCTTCCEEEEEECCCC-H-----HHHHHHHHHHGGGEEEEEEEEESST
T ss_pred HHHHhCCCCceEEEEEcCcc-c-----chHHHHHHHHHHHhCCCcEEEEcCC
Confidence 11 0145679999988853 2 4556788999999999999999765
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.84 E-value=0.0013 Score=55.81 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=56.0
Q ss_pred CCeEEEecCCCCcchHHHHhcC--CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 85 GDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
..+|||+.||.|.+...+...+ ...+.++|+++.+++..+.++.. ..++++|+.++..... +
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~--------------~~~~~~Di~~~~~~~~--~ 65 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH--------------TQLLAKTIEGITLEEF--D 65 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT--------------SCEECSCGGGCCHHHH--H
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc--------------cccccCCHHHccHhHc--C
Confidence 3579999999999999887666 44799999999999999988752 4467889877642111 1
Q ss_pred CCCeeEEEEccccc
Q 024797 163 DAPFDICSCQFAMH 176 (262)
Q Consensus 163 ~~~fD~V~~~~~l~ 176 (262)
...+|+|+...-.+
T Consensus 66 ~~~~D~l~~gpPCq 79 (343)
T 1g55_A 66 RLSFDMILMSPPCQ 79 (343)
T ss_dssp HHCCSEEEECCC--
T ss_pred cCCcCEEEEcCCCc
Confidence 12689999876543
No 309
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.67 E-value=0.011 Score=49.62 Aligned_cols=69 Identities=19% Similarity=0.168 Sum_probs=54.6
Q ss_pred CeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCC
Q 024797 86 DVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAP 165 (262)
Q Consensus 86 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 165 (262)
.+|||+-||.|.+...+.+.+...+.++|+++.+++.-+.+.. ..++++|+.++... .-..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~---------------~~~~~~DI~~i~~~----~~~~ 61 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS---------------AKLIKGDISKISSD----EFPK 61 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC---------------SEEEESCGGGCCGG----GSCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC---------------CCcccCChhhCCHh----hCCc
Confidence 3799999999999888876777678899999999999888765 45678998877543 1246
Q ss_pred eeEEEEcc
Q 024797 166 FDICSCQF 173 (262)
Q Consensus 166 fD~V~~~~ 173 (262)
+|+++...
T Consensus 62 ~D~l~ggp 69 (331)
T 3ubt_Y 62 CDGIIGGP 69 (331)
T ss_dssp CSEEECCC
T ss_pred ccEEEecC
Confidence 89998655
No 310
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.61 E-value=0.0044 Score=52.03 Aligned_cols=55 Identities=9% Similarity=0.192 Sum_probs=43.2
Q ss_pred HHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhcc
Q 024797 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNG 129 (262)
Q Consensus 73 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~ 129 (262)
++.++. ....+++.|||..||+|..+...... ..+++|+|+++..++.+++++..
T Consensus 242 ~~~~i~-~~~~~~~~VlDpF~GsGtt~~aa~~~-gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 242 PEFFIR-MLTEPDDLVVDIFGGSNTTGLVAERE-SRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp HHHHHH-HHCCTTCEEEETTCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHGGGSC
T ss_pred HHHHHH-HhCCCCCEEEECCCCCCHHHHHHHHc-CCCEEEEeCCHHHHHHHHHHHHh
Confidence 444443 33578999999999999877765443 45899999999999999999873
No 311
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.60 E-value=0.0066 Score=51.02 Aligned_cols=71 Identities=18% Similarity=0.171 Sum_probs=54.3
Q ss_pred CCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCC
Q 024797 85 GDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (262)
+.++||+.||.|.+...+...+...+.++|+++.+++..+.++.. . .++|+.++.... -.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~--------------~--~~~Di~~~~~~~----~~ 70 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGE--------------K--PEGDITQVNEKT----IP 70 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSC--------------C--CBSCGGGSCGGG----SC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCC--------------C--CcCCHHHcCHhh----CC
Confidence 468999999999999988777777799999999999999888752 1 167877664321 13
Q ss_pred CeeEEEEcccc
Q 024797 165 PFDICSCQFAM 175 (262)
Q Consensus 165 ~fD~V~~~~~l 175 (262)
.+|+|+...-.
T Consensus 71 ~~D~l~~gpPC 81 (327)
T 2c7p_A 71 DHDILCAGFPC 81 (327)
T ss_dssp CCSEEEEECCC
T ss_pred CCCEEEECCCC
Confidence 58999976533
No 312
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.42 E-value=0.0075 Score=51.49 Aligned_cols=99 Identities=13% Similarity=0.113 Sum_probs=62.6
Q ss_pred HhccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--
Q 024797 80 LYARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-- 155 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-- 155 (262)
....++++||-+|||. |..+..+++. +...|+++|.+++.++.+++.-. -.++..+-.++.
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~~~~ 250 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA---------------THVINSKTQDPVAA 250 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC---------------SEEEETTTSCHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC---------------CEEecCCccCHHHH
Confidence 3456889999999876 6666666663 44479999999999998876432 111211111110
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ..+.+|+|+-.... ...+..+.+.|+++|++++.
T Consensus 251 ~~~~--~~gg~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 251 IKEI--TDGGVNFALESTGS----------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp HHHH--TTSCEEEEEECSCC----------HHHHHHHHHTEEEEEEEEEC
T ss_pred HHHh--cCCCCcEEEECCCC----------HHHHHHHHHHHhcCCEEEEe
Confidence 0011 12379999854432 23567788999999998764
No 313
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.34 E-value=0.0076 Score=50.48 Aligned_cols=56 Identities=18% Similarity=0.109 Sum_probs=42.7
Q ss_pred HHHHHHHHHhccCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCCh---hHHHHHHHHhcc
Q 024797 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAE---GSIEDCRTRYNG 129 (262)
Q Consensus 72 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~---~~~~~a~~~~~~ 129 (262)
.++.++.. ...+++.|||..||+|..+......+ .+++|+|+++ ..++.+++++..
T Consensus 231 l~~~~i~~-~~~~~~~vlDpF~GsGtt~~aa~~~~-r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 231 VIERLVRA-LSHPGSTVLDFFAGSGVTARVAIQEG-RNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp HHHHHHHH-HSCTTCEEEETTCTTCHHHHHHHHHT-CEEEEEESSTHHHHHHHHHHHHC--
T ss_pred HHHHHHHH-hCCCCCEEEecCCCCCHHHHHHHHcC-CcEEEEECCccHHHHHHHHHHHHHH
Confidence 34444433 35789999999999998777665444 4899999999 999999999863
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.13 E-value=0.015 Score=48.86 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=62.9
Q ss_pred HHhccCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc
Q 024797 79 QLYARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (262)
Q Consensus 79 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (262)
.....++++||-.|+|. |..+..+++....+|+++|.+++.++.+++.-. -..+...-.+...
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~~i~~~~~~~~~- 224 (340)
T 3s2e_A 161 VTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGA---------------EVAVNARDTDPAA- 224 (340)
T ss_dssp TTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC---------------SEEEETTTSCHHH-
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCC---------------CEEEeCCCcCHHH-
Confidence 33457899999999875 666666766544489999999999988876422 1111111111100
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
......+.+|+|+....- ...+..+.+.|+++|.+++.
T Consensus 225 ~~~~~~g~~d~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 225 WLQKEIGGAHGVLVTAVS----------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp HHHHHHSSEEEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHhCCCCCEEEEeCCC----------HHHHHHHHHHhccCCEEEEe
Confidence 000012378998754321 23567788999999998764
No 315
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.09 E-value=0.018 Score=48.62 Aligned_cols=93 Identities=16% Similarity=0.066 Sum_probs=62.4
Q ss_pred HHhccCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc
Q 024797 79 QLYARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (262)
Q Consensus 79 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (262)
.....++++||-+|+|. |..+..+++....+|+++|.+++.++.+++.-. -.++ .+... +
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~v~-~~~~~--~- 231 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGV---------------KHFY-TDPKQ--C- 231 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTC---------------SEEE-SSGGG--C-
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCC---------------Ceec-CCHHH--H-
Confidence 34567899999999875 666666666444489999999999988876322 1122 33221 1
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
...+|+|+-...-. ..+....+.|+++|.+++.
T Consensus 232 -----~~~~D~vid~~g~~----------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 232 -----KEELDFIISTIPTH----------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp -----CSCEEEEEECCCSC----------CCHHHHHTTEEEEEEEEEC
T ss_pred -----hcCCCEEEECCCcH----------HHHHHHHHHHhcCCEEEEE
Confidence 12799998644332 1346688899999998764
No 316
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.04 E-value=0.015 Score=48.02 Aligned_cols=75 Identities=23% Similarity=0.255 Sum_probs=55.3
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCe--EEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGY--YVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~--v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
...+++|+.||.|.+...+...+... +.++|+++.+++..+.+.. ...++.+|+.++......
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~--------------~~~~~~~DI~~i~~~~i~- 79 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ--------------GKIMYVGDVRSVTQKHIQ- 79 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT--------------TCEEEECCGGGCCHHHHH-
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC--------------CCceeCCChHHccHHHhc-
Confidence 45689999999999988887666655 7999999999888777654 145678898876532211
Q ss_pred CCCCeeEEEEcc
Q 024797 162 DDAPFDICSCQF 173 (262)
Q Consensus 162 ~~~~fD~V~~~~ 173 (262)
..+.+|+++...
T Consensus 80 ~~~~~Dll~ggp 91 (295)
T 2qrv_A 80 EWGPFDLVIGGS 91 (295)
T ss_dssp HTCCCSEEEECC
T ss_pred ccCCcCEEEecC
Confidence 124689999765
No 317
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.96 E-value=0.021 Score=48.35 Aligned_cols=100 Identities=15% Similarity=0.075 Sum_probs=61.9
Q ss_pred HHhccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc---ccc
Q 024797 79 QLYARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD---CYE 153 (262)
Q Consensus 79 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d---~~~ 153 (262)
.....++++||-+|+|. |..+..+++. +..+|+++|.+++.++.+++.-. -.++..+ ..+
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~~~ 230 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA---------------DLVLQISKESPQE 230 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---------------SEEEECSSCCHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC---------------CEEEcCcccccch
Confidence 34567899999999875 6666666664 34489999999998888875322 1112111 011
Q ss_pred c--ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 154 V--HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 154 ~--~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
. ...... . ..+|+|+-...- ...+....+.|+++|+++..
T Consensus 231 ~~~~i~~~~-~-~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 231 IARKVEGQL-G-CKPEVTIECTGA----------EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHHHHHHH-T-SCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHHh-C-CCCCEEEECCCC----------hHHHHHHHHHhcCCCEEEEE
Confidence 0 000011 2 569999854432 13457788999999998764
No 318
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.96 E-value=0.037 Score=47.16 Aligned_cols=102 Identities=13% Similarity=0.019 Sum_probs=63.5
Q ss_pred HHHhccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEe---Cccc
Q 024797 78 VQLYARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC---GDCY 152 (262)
Q Consensus 78 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~---~d~~ 152 (262)
......++++||-.|+|. |..+..+++. +...|+++|.+++.++.+++.-. ...+. .|..
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~~ 240 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA---------------TATVDPSAGDVV 240 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC---------------SEEECTTSSCHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC---------------CEEECCCCcCHH
Confidence 444567899999999865 5556666654 44489999999999988877432 11111 1111
Q ss_pred ccccccc-cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 153 EVHLDKV-LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 153 ~~~~~~~-~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
+. .... ....+.+|+|+-.... ...+..+.+.|++||.+++.
T Consensus 241 ~~-i~~~~~~~~gg~Dvvid~~G~----------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 241 EA-IAGPVGLVPGGVDVVIECAGV----------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp HH-HHSTTSSSTTCEEEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HH-HHhhhhccCCCCCEEEECCCC----------HHHHHHHHHHhccCCEEEEE
Confidence 00 0000 0023479999854322 23567788999999998764
No 319
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.88 E-value=0.055 Score=39.12 Aligned_cols=103 Identities=13% Similarity=0.048 Sum_probs=63.2
Q ss_pred CCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 85 GDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 85 ~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
..+|+=+|||. |..+...+......|+++|.+++.++.+++. . +.++.+|..+....... .-
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-g---------------~~~i~gd~~~~~~l~~a-~i 69 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-G---------------VRAVLGNAANEEIMQLA-HL 69 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-T---------------CEEEESCTTSHHHHHHT-TG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-C---------------CCEEECCCCCHHHHHhc-Cc
Confidence 35799999975 4444433333444799999999988877652 2 66788887654321110 12
Q ss_pred CCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
...|+|++...- ... ...+-...+.+.|+..++....+...
T Consensus 70 ~~ad~vi~~~~~------~~~-n~~~~~~a~~~~~~~~iiar~~~~~~ 110 (140)
T 3fwz_A 70 ECAKWLILTIPN------GYE-AGEIVASARAKNPDIEIIARAHYDDE 110 (140)
T ss_dssp GGCSEEEECCSC------HHH-HHHHHHHHHHHCSSSEEEEEESSHHH
T ss_pred ccCCEEEEECCC------hHH-HHHHHHHHHHHCCCCeEEEEECCHHH
Confidence 467888764322 122 22233456667788888887777654
No 320
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.82 E-value=0.018 Score=47.59 Aligned_cols=62 Identities=24% Similarity=0.230 Sum_probs=42.6
Q ss_pred CeEEEeCccccc-ccccccCCCCCeeEEEEcccccccCC--C--------------HHHHHHHHHHHHhccCCCcEEEEE
Q 024797 143 PARLICGDCYEV-HLDKVLADDAPFDICSCQFAMHYSWS--T--------------EARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 143 ~v~~~~~d~~~~-~~~~~~~~~~~fD~V~~~~~l~~~~~--~--------------~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
++.++++|+.+. .. .++++||+|+++--...... . ......++.++.++|+|||.+++.
T Consensus 21 ~~~i~~gD~~~~l~~----l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 21 VHRLHVGDAREVLAS----FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CEEEEESCHHHHHTT----SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECcHHHHHhh----CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 478999998763 21 15689999999764421100 0 012356788999999999999988
Q ss_pred eCC
Q 024797 206 MPD 208 (262)
Q Consensus 206 ~~~ 208 (262)
+.+
T Consensus 97 ~~d 99 (297)
T 2zig_A 97 VGD 99 (297)
T ss_dssp ECC
T ss_pred ECC
Confidence 764
No 321
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.76 E-value=0.013 Score=49.25 Aligned_cols=76 Identities=11% Similarity=0.173 Sum_probs=55.7
Q ss_pred CCCeEEEecCCCCcchHHHHhcCC--CeE-EEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKI--GYY-VGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v-~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
...+++|+.||.|.+...+...+. ..+ .++|+++.+++..+.++.. .++++|+.++.....
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~---------------~~~~~DI~~~~~~~i- 72 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE---------------EVQVKNLDSISIKQI- 72 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC---------------CCBCCCTTTCCHHHH-
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC---------------CcccCChhhcCHHHh-
Confidence 356899999999999988866653 457 7999999999999888762 156788877653221
Q ss_pred CCCCCeeEEEEccccc
Q 024797 161 ADDAPFDICSCQFAMH 176 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~ 176 (262)
+...+|+++...-.+
T Consensus 73 -~~~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 73 -ESLNCNTWFMSPPCQ 87 (327)
T ss_dssp -HHTCCCEEEECCCCT
T ss_pred -ccCCCCEEEecCCcc
Confidence 123689999766444
No 322
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.74 E-value=0.013 Score=49.28 Aligned_cols=74 Identities=14% Similarity=0.216 Sum_probs=54.3
Q ss_pred CeEEEecCCCCcchHHHHhcCC--CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 86 DVVLDLACGKGGDLIKWDKAKI--GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 86 ~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
.+++|+.||.|.+...+...+. ..+.++|+++.+++..+.++.. ..++++|+.++..... +.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~--------------~~~~~~DI~~~~~~~~--~~ 67 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE--------------TNLLNRNIQQLTPQVI--KK 67 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT--------------SCEECCCGGGCCHHHH--HH
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC--------------CceeccccccCCHHHh--cc
Confidence 4799999999999888866554 4588999999999998887752 3467788877653211 12
Q ss_pred CCeeEEEEcccc
Q 024797 164 APFDICSCQFAM 175 (262)
Q Consensus 164 ~~fD~V~~~~~l 175 (262)
..+|+++...-.
T Consensus 68 ~~~D~l~ggpPC 79 (333)
T 4h0n_A 68 WNVDTILMSPPC 79 (333)
T ss_dssp TTCCEEEECCCC
T ss_pred CCCCEEEecCCC
Confidence 368999976533
No 323
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.69 E-value=0.044 Score=46.67 Aligned_cols=97 Identities=20% Similarity=0.151 Sum_probs=60.8
Q ss_pred HhccCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 80 LYARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
....++++||-+|+|. |..+..+++....+|+++|.+++.++.+++.-. ..++...-.+. ...
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~-~~~ 253 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA---------------DEVVNSRNADE-MAA 253 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---------------SEEEETTCHHH-HHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---------------cEEeccccHHH-HHH
Confidence 3467899999999875 656666666444479999999999998876322 11111110110 000
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
-.+.+|+|+-...-. ..+....+.|+++|.++..
T Consensus 254 ---~~~g~Dvvid~~g~~----------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 254 ---HLKSFDFILNTVAAP----------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp ---TTTCEEEEEECCSSC----------CCHHHHHTTEEEEEEEEEC
T ss_pred ---hhcCCCEEEECCCCH----------HHHHHHHHHhccCCEEEEe
Confidence 115799998654332 1245678899999998764
No 324
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.60 E-value=0.028 Score=47.55 Aligned_cols=102 Identities=13% Similarity=0.070 Sum_probs=63.3
Q ss_pred HHHhccCCCeEEEecCCC-CcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc
Q 024797 78 VQLYARRGDVVLDLACGK-GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (262)
Q Consensus 78 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (262)
......++++||-+|+|. |..+..+++.. ..+|+++|.+++.++.+++.-. ..++..+-.++.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~ 224 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA---------------TDIINYKNGDIV 224 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC---------------CEEECGGGSCHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC---------------ceEEcCCCcCHH
Confidence 444567899999999875 65666666643 3479999999998888877532 111111111110
Q ss_pred --cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 --LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 --~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... .....+|+|+-...-. ..+..+.+.|+++|+++..
T Consensus 225 ~~v~~~-t~g~g~D~v~d~~g~~----------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 225 EQILKA-TDGKGVDKVVIAGGDV----------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HHHHHH-TTTCCEEEEEECSSCT----------THHHHHHHHEEEEEEEEEC
T ss_pred HHHHHH-cCCCCCCEEEECCCCh----------HHHHHHHHHHhcCCEEEEe
Confidence 0001 0234699998543321 2467788999999998754
No 325
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.41 E-value=0.067 Score=45.15 Aligned_cols=101 Identities=15% Similarity=0.073 Sum_probs=61.3
Q ss_pred HHhccCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc-ccccc-
Q 024797 79 QLYARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD-CYEVH- 155 (262)
Q Consensus 79 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d-~~~~~- 155 (262)
.....++++||-+|+|. |..+..+++....+|+++|.+++.++.+++.-. . ..+..+ ..+..
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa--------------~-~~~~~~~~~~~~~ 227 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGA--------------D-VTLVVDPAKEEES 227 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC--------------S-EEEECCTTTSCHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCC--------------C-EEEcCcccccHHH
Confidence 34567899999999865 556666666444469999999998888875322 0 111111 01110
Q ss_pred -cccccCC---CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 -LDKVLAD---DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 -~~~~~~~---~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
..... . ...+|+|+-.... ...+....+.|+++|.++..
T Consensus 228 ~i~~~~-~~~~g~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 228 SIIERI-RSAIGDLPNVTIDCSGN----------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHHHH-HHHSSSCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHh-ccccCCCCCEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 00000 1 2469999854432 12467788899999998764
No 326
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.35 E-value=0.08 Score=44.84 Aligned_cols=104 Identities=17% Similarity=0.036 Sum_probs=64.1
Q ss_pred HHHhccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc--cc
Q 024797 78 VQLYARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC--YE 153 (262)
Q Consensus 78 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~--~~ 153 (262)
......++++||-+|+|. |..+..+++. +...|+++|.+++-++.+++. .. .-+.+...+. .+
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~------------~~~~~~~~~~~~~~ 239 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP------------EVVTHKVERLSAEE 239 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT------------TCEEEECCSCCHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch------------hcccccccccchHH
Confidence 344567899999999865 6666666664 443599999999999999876 31 1112211110 11
Q ss_pred cc--cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 154 VH--LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 154 ~~--~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
+. .... .....+|+|+-...- ...+..+.+.|++||++++.
T Consensus 240 ~~~~v~~~-t~g~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 240 SAKKIVES-FGGIEPAVALECTGV----------ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HHHHHHHH-TSSCCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHH-hCCCCCCEEEECCCC----------hHHHHHHHHHhcCCCEEEEE
Confidence 10 0001 123579999864432 13567788999999998864
No 327
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.17 E-value=0.037 Score=47.66 Aligned_cols=110 Identities=13% Similarity=0.037 Sum_probs=64.1
Q ss_pred HHhccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-c
Q 024797 79 QLYARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-H 155 (262)
Q Consensus 79 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~ 155 (262)
.....++++||-+|||. |..+..+++. +..+|+++|.+++.++.+++. . ...+...-.+. .
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-G---------------a~~i~~~~~~~~~ 243 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-G---------------FETIDLRNSAPLR 243 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-T---------------CEEEETTSSSCHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-C---------------CcEEcCCCcchHH
Confidence 34567899999999876 6666677664 444899999999988888643 1 12221111111 0
Q ss_pred --cccccCCCCCeeEEEEcccccccCC-C---HHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 --LDKVLADDAPFDICSCQFAMHYSWS-T---EARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 --~~~~~~~~~~fD~V~~~~~l~~~~~-~---~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
..... ....+|+|+-...-..... . .......+..+.+.|++||++++.
T Consensus 244 ~~~~~~~-~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 244 DQIDQIL-GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HHHHHHH-SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred HHHHHHh-CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 00000 2236999986543321000 0 000123577888999999998753
No 328
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.12 E-value=0.022 Score=43.78 Aligned_cols=96 Identities=20% Similarity=0.168 Sum_probs=57.0
Q ss_pred hccCCCeEEEecCCC--CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc--
Q 024797 81 YARRGDVVLDLACGK--GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-- 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~--G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 156 (262)
...++.+||..|++. |..+..+++....+|+++|.+++.++.+++. . ... . .|..+...
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~-g-------------~~~-~--~d~~~~~~~~ 97 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL-G-------------VEY-V--GDSRSVDFAD 97 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT-C-------------CSE-E--EETTCSTHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-C-------------CCE-E--eeCCcHHHHH
Confidence 346788999999533 5555555543334899999998877766542 1 001 1 12211111
Q ss_pred --ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 --DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 --~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+.+..- ..+..+.+.|+++|+++..
T Consensus 98 ~~~~~~-~~~~~D~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 98 EILELT-DGYGVDVVLNSLAG-----------EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp HHHHHT-TTCCEEEEEECCCT-----------HHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHh-CCCCCeEEEECCch-----------HHHHHHHHHhccCCEEEEE
Confidence 0001 23469999865421 2467788999999998764
No 329
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.00 E-value=0.018 Score=49.57 Aligned_cols=105 Identities=10% Similarity=0.052 Sum_probs=63.9
Q ss_pred HhccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc-c--
Q 024797 80 LYARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-V-- 154 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~-- 154 (262)
....++++||-+|||. |..+..+++. +...|+++|.+++.++.+++.- ++.+...-.+ +
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG----------------a~~i~~~~~~~~~~ 244 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG----------------FEIADLSLDTPLHE 244 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT----------------CEEEETTSSSCHHH
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC----------------CcEEccCCcchHHH
Confidence 4457889999999876 6666667664 4447999999999998887532 1222111001 0
Q ss_pred ccccccCCCCCeeEEEEccccc---------ccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 155 HLDKVLADDAPFDICSCQFAMH---------YSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~---------~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
...... ....+|+|+-...-. |. .+....+....+.|++||.+++.
T Consensus 245 ~v~~~t-~g~g~Dvvid~~G~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 245 QIAALL-GEPEVDCAVDAVGFEARGHGHEGAKH----EAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp HHHHHH-SSSCEEEEEECCCTTCBCSSTTGGGS----BCTTHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHh-CCCCCCEEEECCCCcccccccccccc----cchHHHHHHHHHHHhcCCEEEEe
Confidence 000000 224699998654321 11 11234677888999999998764
No 330
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.94 E-value=0.053 Score=46.30 Aligned_cols=99 Identities=15% Similarity=0.114 Sum_probs=61.2
Q ss_pred HhccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc--ccccc
Q 024797 80 LYARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD--CYEVH 155 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d--~~~~~ 155 (262)
....++++||-+|+|. |..+..+++. +..+|+++|.+++-++.+++.-. -.++... -.++.
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~~~~ 253 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV---------------NEFVNPKDHDKPIQ 253 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC---------------CEEECGGGCSSCHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC---------------cEEEccccCchhHH
Confidence 3456889999999864 6566666653 44579999999999988875322 1111111 00110
Q ss_pred --cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCC-cEEEEE
Q 024797 156 --LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (262)
Q Consensus 156 --~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~g-G~li~~ 205 (262)
.... ..+.+|+|+-...- ...+..+.+.|++| |++++.
T Consensus 254 ~~i~~~--~~gg~D~vid~~g~----------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 254 EVIVDL--TDGGVDYSFECIGN----------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHHHHH--TTSCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHHh--cCCCCCEEEECCCC----------HHHHHHHHHHhhccCCEEEEE
Confidence 0011 23479999854332 23567888999996 998764
No 331
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.90 E-value=0.12 Score=44.52 Aligned_cols=103 Identities=11% Similarity=-0.092 Sum_probs=59.6
Q ss_pred ccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--cc
Q 024797 82 ARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LD 157 (262)
Q Consensus 82 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~ 157 (262)
..++++||-+|+|. |..+..+++. +..+|+++|.+++-++.+++.-. -.++..+-.++. ..
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~i~ 275 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA---------------DHVIDPTKENFVEAVL 275 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC---------------SEEECTTTSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC---------------CEEEcCCCCCHHHHHH
Confidence 46889999999864 5555566654 44489999999999998876532 111211111110 00
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... ....+|+|+-...-. ......+++.+.+.++++|.+++.
T Consensus 276 ~~t-~g~g~D~vid~~g~~-----~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 276 DYT-NGLGAKLFLEATGVP-----QLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp HHT-TTCCCSEEEECSSCH-----HHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred HHh-CCCCCCEEEECCCCc-----HHHHHHHHHHHHhccCCCcEEEEe
Confidence 011 234699998543321 012233444445666999998864
No 332
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.86 E-value=0.046 Score=46.00 Aligned_cols=98 Identities=8% Similarity=0.079 Sum_probs=62.3
Q ss_pred hccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--c
Q 024797 81 YARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (262)
...++++||-+|+|. |..+..+++. +..+|+++|.+++-++.+++.-. ..++..+- +.. .
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa---------------~~~i~~~~-~~~~~v 231 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA---------------DAAVKSGA-GAADAI 231 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC---------------SEEEECST-THHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC---------------CEEEcCCC-cHHHHH
Confidence 457889999999875 6666666654 35689999999999998876422 11121111 110 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+-.-.- ...+..+.+.|+++|.+++.
T Consensus 232 ~~~t-~g~g~d~v~d~~G~----------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 232 RELT-GGQGATAVFDFVGA----------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp HHHH-GGGCEEEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHHh-CCCCCeEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 0000 12379999854322 23567888999999998864
No 333
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.85 E-value=0.046 Score=46.43 Aligned_cols=98 Identities=13% Similarity=-0.053 Sum_probs=61.6
Q ss_pred hccCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--cc
Q 024797 81 YARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LD 157 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~ 157 (262)
...++++||-+|+|. |..+..+++....+|+++|.+++.++.+++.-. -.++..+..++. ..
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~v~ 250 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA---------------DHGINRLEEDWVERVY 250 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC---------------SEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC---------------CEEEcCCcccHHHHHH
Confidence 456889999999775 656666666544489999999998888876422 112221111110 00
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... ....+|+|+-...-. .+..+.+.|+++|.+++.
T Consensus 251 ~~~-~g~g~D~vid~~g~~-----------~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 251 ALT-GDRGADHILEIAGGA-----------GLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp HHH-TTCCEEEEEEETTSS-----------CHHHHHHHEEEEEEEEEE
T ss_pred HHh-CCCCceEEEECCChH-----------HHHHHHHHhhcCCEEEEE
Confidence 000 234799998654421 346678899999998865
No 334
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.80 E-value=0.2 Score=41.80 Aligned_cols=63 Identities=14% Similarity=0.212 Sum_probs=43.9
Q ss_pred CeEEEeCcccc-cccccccCCCCCeeEEEEccccccc----CCC------HHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 143 PARLICGDCYE-VHLDKVLADDAPFDICSCQFAMHYS----WST------EARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 143 ~v~~~~~d~~~-~~~~~~~~~~~~fD~V~~~~~l~~~----~~~------~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
...++++|+.+ +.. .++++||+|++.--.... +.. .......+.++.++|+|||.+++.+.+.
T Consensus 14 ~~~ii~gD~~~~l~~----l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 14 NGSMYIGDSLELLES----FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SEEEEESCHHHHGGG----SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CceEEeCcHHHHHhh----CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 47789999865 321 157899999997533211 000 1346788999999999999999987654
No 335
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.72 E-value=0.1 Score=44.45 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=60.0
Q ss_pred hccCCCeEEEecCCC-CcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc--cccc-
Q 024797 81 YARRGDVVLDLACGK-GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC--YEVH- 155 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~--~~~~- 155 (262)
...++++||-+|+|. |..+..+++.. ..+|+++|.+++.++.+++.-. ..++..+- .++.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~~ 252 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA---------------TECVNPQDYKKPIQE 252 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---------------SEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC---------------ceEecccccchhHHH
Confidence 456889999999865 55566666543 3379999999999988875321 11111110 0010
Q ss_pred -cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCC-cEEEEE
Q 024797 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (262)
Q Consensus 156 -~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~g-G~li~~ 205 (262)
.... ..+.+|+|+-...- ...+....+.|+++ |.+++.
T Consensus 253 ~~~~~--~~~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 253 VLTEM--SNGGVDFSFEVIGR----------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHHHH--TTSCBSEEEECSCC----------HHHHHHHHHHBCTTTCEEEEC
T ss_pred HHHHH--hCCCCcEEEECCCC----------HHHHHHHHHHhhcCCcEEEEe
Confidence 0001 12479999854322 23467788899999 998764
No 336
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.72 E-value=0.082 Score=44.99 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=60.2
Q ss_pred hccCCCeEEEecCCC-CcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc-c-cccc-
Q 024797 81 YARRGDVVLDLACGK-GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD-C-YEVH- 155 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d-~-~~~~- 155 (262)
...++++||-+|+|. |..+..+++.. ..+|+++|.+++.++.+++.-. ..++... . .++.
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~~ 253 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA---------------TDFVNPNDHSEPISQ 253 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---------------CEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCC---------------ceEEeccccchhHHH
Confidence 456889999999865 55566666543 3379999999999988875321 1111111 0 0110
Q ss_pred -cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCC-cEEEEE
Q 024797 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (262)
Q Consensus 156 -~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~g-G~li~~ 205 (262)
.... ..+.+|+|+-.... ...+..+.+.|+++ |.++..
T Consensus 254 ~~~~~--~~~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 254 VLSKM--TNGGVDFSLECVGN----------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHHH--HTSCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHH--hCCCCCEEEECCCC----------HHHHHHHHHHhhcCCcEEEEE
Confidence 0001 12479999854322 23567788999999 998764
No 337
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.67 E-value=0.055 Score=45.53 Aligned_cols=97 Identities=18% Similarity=0.008 Sum_probs=60.0
Q ss_pred hccCCCeEEEecCCC-CcchHHHHhcC--CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc-ccccc
Q 024797 81 YARRGDVVLDLACGK-GGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC-YEVHL 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~-G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~ 156 (262)
.. ++++||-+|+|. |..+..+++.. ..+|+++|.+++.++.+++.-. ..++..+- .+. .
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~-~ 230 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGA---------------DYVSEMKDAESL-I 230 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTC---------------SEEECHHHHHHH-H
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCC---------------CEEeccccchHH-H
Confidence 45 889999999964 55566666543 4479999999999888876422 11111000 000 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+-.... ...+..+.+.|+++|.++..
T Consensus 231 ~~~~-~g~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 231 NKLT-DGLGASIAIDLVGT----------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp HHHH-TTCCEEEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHhh-cCCCccEEEECCCC----------hHHHHHHHHHhhcCCEEEEe
Confidence 0000 22379999865432 13567788999999998764
No 338
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.66 E-value=0.085 Score=44.87 Aligned_cols=98 Identities=11% Similarity=0.010 Sum_probs=60.4
Q ss_pred hccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcc--cccc-
Q 024797 81 YARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC--YEVH- 155 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~--~~~~- 155 (262)
...++++||-+|+|. |..+..+++. +..+|+++|.+++.++.+++.-. -.++..+- .++.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~~~~~ 252 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA---------------TECLNPKDYDKPIYE 252 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC---------------SEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC---------------cEEEecccccchHHH
Confidence 456889999999875 5556666653 44479999999999988875321 11111110 0110
Q ss_pred -cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCC-cEEEEE
Q 024797 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (262)
Q Consensus 156 -~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~g-G~li~~ 205 (262)
.... ..+.+|+|+-...- ...+..+.+.|+++ |.++..
T Consensus 253 ~i~~~--t~gg~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 253 VICEK--TNGGVDYAVECAGR----------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HHHHH--TTSCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHH--hCCCCCEEEECCCC----------HHHHHHHHHHHhcCCCEEEEE
Confidence 0011 12479999854322 23567788999999 998764
No 339
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.65 E-value=0.096 Score=44.50 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=60.5
Q ss_pred hccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeC-cc-cccc-
Q 024797 81 YARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG-DC-YEVH- 155 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~-d~-~~~~- 155 (262)
...++++||-+|+|. |..+..+++. +...|+++|.+++.++.+++.-. ..++.. +. .++.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~~ 251 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA---------------TECINPQDFSKPIQE 251 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC---------------SEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC---------------ceEeccccccccHHH
Confidence 456889999999865 5555566653 44479999999999998875422 111111 10 0110
Q ss_pred -cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCC-cEEEEE
Q 024797 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (262)
Q Consensus 156 -~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~g-G~li~~ 205 (262)
.... ..+.+|+|+-...- ...+..+.+.|+++ |.++..
T Consensus 252 ~v~~~--~~~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 252 VLIEM--TDGGVDYSFECIGN----------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHHHH--TTSCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHH--hCCCCCEEEECCCc----------HHHHHHHHHhhccCCcEEEEE
Confidence 0001 12479999854422 23467788999999 998764
No 340
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.62 E-value=0.17 Score=41.89 Aligned_cols=113 Identities=12% Similarity=0.057 Sum_probs=59.3
Q ss_pred cCCCeEEEecCCCCcchHHHH----h-cCCC--eEEEEeCCh--------h-HHHHHHHHhccCccccccccCCCCCeEE
Q 024797 83 RRGDVVLDLACGKGGDLIKWD----K-AKIG--YYVGIDIAE--------G-SIEDCRTRYNGDADHHQRRKKFSFPARL 146 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~----~-~~~~--~v~gvD~s~--------~-~~~~a~~~~~~~~~~~~~~~~~~~~v~~ 146 (262)
.+.-+|||+|-|+|......+ + .+.. .++.+|..+ . ..+.......... .-........+
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p----~~~~~~v~L~l 170 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVP----EYEGERLSLKV 170 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCS----EEECSSEEEEE
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCc----cccCCcEEEEE
Confidence 344589999999998654322 1 2333 356776421 1 1111111111000 00011223567
Q ss_pred EeCcccccccccccCCCCCeeEEEEcccccccCCCHHH-HHHHHHHHHhccCCCcEEEE
Q 024797 147 ICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEAR-ARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 147 ~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~-~~~~l~~~~~~L~~gG~li~ 204 (262)
..+|+.+.- ..+ +...||+|+..+.-.-. +++- -..+++.+++.++|||.++-
T Consensus 171 ~~GDa~~~l-~~l--~~~~~Da~flDgFsP~k--NPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 171 LLGDARKRI-KEV--ENFKADAVFHDAFSPYK--NPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp EESCHHHHG-GGC--CSCCEEEEEECCSCTTT--SGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred EechHHHHH-hhh--cccceeEEEeCCCCccc--CcccCCHHHHHHHHHHhCCCcEEEE
Confidence 788875531 111 34579999987622110 1111 15799999999999998763
No 341
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.57 E-value=0.12 Score=43.44 Aligned_cols=99 Identities=16% Similarity=0.140 Sum_probs=59.9
Q ss_pred HhccCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 80 LYARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
....++++||-+|+|. |..+..+++....+|+++|.+++.++.+++.-. ..+ .|..+..+..
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~~--~d~~~~~~~~ 222 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA---------------DLV--VNPLKEDAAK 222 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC---------------SEE--ECTTTSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC---------------CEE--ecCCCccHHH
Confidence 3567889999999964 555555555444489999999998888865211 011 1221111100
Q ss_pred cc-CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 159 VL-ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ~~-~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.. ...+.+|+|+..... ...+....+.|+++|.++..
T Consensus 223 ~~~~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 223 FMKEKVGGVHAAVVTAVS----------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp HHHHHHSSEEEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHhCCCCEEEECCCC----------HHHHHHHHHHhhcCCEEEEe
Confidence 00 001469999865432 13567788899999998754
No 342
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.53 E-value=0.04 Score=46.26 Aligned_cols=99 Identities=18% Similarity=0.167 Sum_probs=59.4
Q ss_pred HhccCCCeEEEecCCC--CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--
Q 024797 80 LYARRGDVVLDLACGK--GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-- 155 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~--G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-- 155 (262)
....++.+||-.|+|+ |..+..+++....+|+++|.+++.++.+++.-. -..+...-.++.
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga---------------~~~~~~~~~~~~~~ 204 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA---------------AYVIDTSTAPLYET 204 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---------------SEEEETTTSCHHHH
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC---------------cEEEeCCcccHHHH
Confidence 3456889999999984 555666665433489999999998888876422 111111111110
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... .....+|+|+....-. . +....+.|+++|.++..
T Consensus 205 ~~~~-~~~~g~Dvvid~~g~~-------~----~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 205 VMEL-TNGIGADAAIDSIGGP-------D----GNELAFSLRPNGHFLTI 242 (340)
T ss_dssp HHHH-TTTSCEEEEEESSCHH-------H----HHHHHHTEEEEEEEEEC
T ss_pred HHHH-hCCCCCcEEEECCCCh-------h----HHHHHHHhcCCCEEEEE
Confidence 0001 1234799998654322 1 12344789999998764
No 343
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.52 E-value=0.063 Score=45.46 Aligned_cols=99 Identities=16% Similarity=0.041 Sum_probs=59.6
Q ss_pred HhccCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-ccc
Q 024797 80 LYARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLD 157 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~ 157 (262)
....++++||-+|+|. |..+..+++....+|+++|.+++.++.+++.-. ..++.. .+. .+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~v~~~--~~~~~~~ 237 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA---------------DHYIAT--LEEGDWG 237 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---------------SEEEEG--GGTSCHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC---------------CEEEcC--cCchHHH
Confidence 4457889999999864 555666665433379999999998888876322 111111 111 110
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... . +.+|+|+....-. . ...+..+.+.|+++|.++..
T Consensus 238 ~~~-~-~~~D~vid~~g~~----~----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 238 EKY-F-DTFDLIVVCASSL----T----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp HHS-C-SCEEEEEECCSCS----T----TCCTTTGGGGEEEEEEEEEC
T ss_pred HHh-h-cCCCEEEECCCCC----c----HHHHHHHHHHhcCCCEEEEe
Confidence 011 1 4799998654330 0 01235577899999998753
No 344
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.46 E-value=0.098 Score=44.67 Aligned_cols=98 Identities=16% Similarity=0.045 Sum_probs=59.9
Q ss_pred ccCCCeEEEecCCC-CcchHHHHhcCC-CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc---ccccc-
Q 024797 82 ARRGDVVLDLACGK-GGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD---CYEVH- 155 (262)
Q Consensus 82 ~~~~~~vLDiGcG~-G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d---~~~~~- 155 (262)
..++++||-+|+|. |..+..+++... .+|+++|.+++.++.+++.-. -.++..+ -.++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~~~ 257 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA---------------DLTLNRRETSVEERRK 257 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC---------------SEEEETTTSCHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC---------------cEEEeccccCcchHHH
Confidence 56789999999764 555666666444 589999999998888875321 1112111 00100
Q ss_pred -cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 -~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
..... ....+|+|+-..... ..+....+.|+++|.++..
T Consensus 258 ~v~~~~-~g~g~Dvvid~~g~~----------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 258 AIMDIT-HGRGADFILEATGDS----------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHHHT-TTSCEEEEEECSSCT----------THHHHHHHHEEEEEEEEEC
T ss_pred HHHHHh-CCCCCcEEEECCCCH----------HHHHHHHHHHhcCCEEEEE
Confidence 00010 223699998654321 2456788899999998764
No 345
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.44 E-value=0.2 Score=41.94 Aligned_cols=102 Identities=11% Similarity=0.033 Sum_probs=60.6
Q ss_pred HHhccCCCeEEEecCCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc-
Q 024797 79 QLYARRGDVVLDLACGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH- 155 (262)
Q Consensus 79 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~- 155 (262)
.....++++||-.|+|. |..+..+++. +...++++|.+++-++.+++.-. ...+...-.+..
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa---------------~~~i~~~~~~~~~ 219 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA---------------MQTFNSSEMSAPQ 219 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---------------SEEEETTTSCHHH
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC---------------eEEEeCCCCCHHH
Confidence 34456889999999876 4344445543 45568999999998888876432 112211111110
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
..........+|+|+..... ...+....+.|++||.+++.
T Consensus 220 ~~~~~~~~~g~d~v~d~~G~----------~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 220 MQSVLRELRFNQLILETAGV----------PQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp HHHHHGGGCSSEEEEECSCS----------HHHHHHHHHHCCTTCEEEEC
T ss_pred HHHhhcccCCcccccccccc----------cchhhhhhheecCCeEEEEE
Confidence 00000123557888754322 23567778899999998764
No 346
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.42 E-value=0.049 Score=45.60 Aligned_cols=99 Identities=13% Similarity=0.005 Sum_probs=60.4
Q ss_pred HhccCCCeEEEecCCC--CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--
Q 024797 80 LYARRGDVVLDLACGK--GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-- 155 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~--G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-- 155 (262)
....++++||-.|++. |..+..+++....+|+++|.+++.++.+.+.+. . ...+...-.++.
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g-------------~-~~~~~~~~~~~~~~ 210 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELG-------------F-DGAIDYKNEDLAAG 210 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC-------------C-SEEEETTTSCHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-------------C-CEEEECCCHHHHHH
Confidence 3457899999999843 656666665444489999999988887743332 0 111111111110
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ..+.+|+|+.+..- ..+..+.+.|+++|.+++.
T Consensus 211 ~~~~--~~~~~d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 211 LKRE--CPKGIDVFFDNVGG-----------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHHH--CTTCEEEEEESSCH-----------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHh--cCCCceEEEECCCc-----------chHHHHHHHHhhCCEEEEE
Confidence 0011 13579999864421 2567888999999998764
No 347
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.38 E-value=0.1 Score=44.43 Aligned_cols=98 Identities=13% Similarity=0.057 Sum_probs=59.9
Q ss_pred hccCCCeEEEecCCC-CcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCc-c-cccc-
Q 024797 81 YARRGDVVLDLACGK-GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD-C-YEVH- 155 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d-~-~~~~- 155 (262)
...++++||-+|+|. |..+..+++.. ..+|+++|.+++.++.+++.-. ..++... . .++.
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~~~~~ 256 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA---------------TDCLNPRELDKPVQD 256 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---------------SEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC---------------cEEEccccccchHHH
Confidence 456889999999864 55566666543 3479999999999888875321 1111110 0 0010
Q ss_pred -cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCC-cEEEEE
Q 024797 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (262)
Q Consensus 156 -~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~g-G~li~~ 205 (262)
.... ..+.+|+|+-.-.- ...+..+.+.|+++ |.+++.
T Consensus 257 ~v~~~--~~~g~Dvvid~~G~----------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 257 VITEL--TAGGVDYSLDCAGT----------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHHHH--HTSCBSEEEESSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHH--hCCCccEEEECCCC----------HHHHHHHHHHhhcCCCEEEEE
Confidence 0000 12479999854322 23567788999999 998753
No 348
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.29 E-value=0.13 Score=43.28 Aligned_cols=100 Identities=13% Similarity=0.146 Sum_probs=60.2
Q ss_pred HhccCCCeEEEecCCC--CcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc-
Q 024797 80 LYARRGDVVLDLACGK--GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH- 155 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~--G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~- 155 (262)
....++.+||-.|+|. |..+..+++.. ..+|+++|.+++.++.+++.-. ...+-..+ .+..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~--------------~~~~~~~~-~~~~~ 230 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA--------------DYVINASM-QDPLA 230 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC--------------SEEEETTT-SCHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC--------------CEEecCCC-ccHHH
Confidence 4456889999999984 44455555443 4479999999988888865321 01111111 1100
Q ss_pred -cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 -~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
..... ..+.+|+|+....- ...+..+.+.|+++|.++..
T Consensus 231 ~~~~~~-~~~~~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 231 EIRRIT-ESKGVDAVIDLNNS----------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp HHHHHT-TTSCEEEEEESCCC----------HHHHTTGGGGEEEEEEEEEC
T ss_pred HHHHHh-cCCCceEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 00111 11579999865432 13567788999999998763
No 349
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.24 E-value=0.15 Score=43.29 Aligned_cols=94 Identities=11% Similarity=0.071 Sum_probs=59.7
Q ss_pred CCCeEEEec-CCC-CcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--ccc
Q 024797 84 RGDVVLDLA-CGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LDK 158 (262)
Q Consensus 84 ~~~~vLDiG-cG~-G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~ 158 (262)
++.+||-.| +|. |..+..+++. ...+|+++|.+++-++.+++.-. -.++... .++. ...
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa---------------d~vi~~~-~~~~~~v~~ 234 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA---------------HHVIDHS-KPLAAEVAA 234 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC---------------SEEECTT-SCHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC---------------CEEEeCC-CCHHHHHHH
Confidence 678999998 554 7677777765 56689999999988888876321 1111111 0110 110
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
. ..+.+|+|+-...- ...+..+.+.|+++|.+++.
T Consensus 235 ~--~~~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 235 L--GLGAPAFVFSTTHT----------DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp T--CSCCEEEEEECSCH----------HHHHHHHHHHSCTTCEEEEC
T ss_pred h--cCCCceEEEECCCc----------hhhHHHHHHHhcCCCEEEEE
Confidence 1 23579999853321 23567788999999998864
No 350
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.20 E-value=0.088 Score=43.87 Aligned_cols=98 Identities=14% Similarity=0.134 Sum_probs=59.9
Q ss_pred hccCCCeEEEecC-C-CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--c
Q 024797 81 YARRGDVVLDLAC-G-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (262)
Q Consensus 81 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (262)
...++++||-.|+ | .|..+..+++....+|+++|.+++.++.+++.-. ...+..+-.++. .
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---------------~~~~~~~~~~~~~~~ 201 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA---------------WETIDYSHEDVAKRV 201 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---------------SEEEETTTSCHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---------------CEEEeCCCccHHHHH
Confidence 3467899999983 4 3656666665433489999999998888876422 111111111110 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... .....+|+|+....-. .+..+.+.|+++|.+++.
T Consensus 202 ~~~-~~~~g~Dvvid~~g~~-----------~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 202 LEL-TDGKKCPVVYDGVGQD-----------TWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp HHH-TTTCCEEEEEESSCGG-----------GHHHHHTTEEEEEEEEEC
T ss_pred HHH-hCCCCceEEEECCChH-----------HHHHHHHHhcCCCEEEEE
Confidence 001 1234799998654332 356778899999998875
No 351
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.20 E-value=0.089 Score=46.48 Aligned_cols=81 Identities=11% Similarity=0.069 Sum_probs=55.7
Q ss_pred CeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc------
Q 024797 86 DVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV------ 159 (262)
Q Consensus 86 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~------ 159 (262)
.+++|+.||.|.+...+...+...+.++|+++.+++.-+.++.. .....++++|+.++.....
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~-----------~p~~~~~~~DI~~i~~~~~~~~~~~ 157 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYC-----------DPATHHFNEDIRDITLSHQEGVSDE 157 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCC-----------CTTTCEEESCTHHHHCTTCTTSCHH
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhccc-----------CCCcceeccchhhhhhccccccchh
Confidence 58999999999999888666665689999999998888877631 1124567788876542100
Q ss_pred ------cCCCCCeeEEEEcccccc
Q 024797 160 ------LADDAPFDICSCQFAMHY 177 (262)
Q Consensus 160 ------~~~~~~fD~V~~~~~l~~ 177 (262)
......+|+|+...-.+-
T Consensus 158 ~~~~~i~~~~~~~Dvl~gGpPCQ~ 181 (482)
T 3me5_A 158 AAAEHIRQHIPEHDVLLAGFPCQP 181 (482)
T ss_dssp HHHHHHHHHSCCCSEEEEECCCCC
T ss_pred hHHhhhhhcCCCCCEEEecCCCcc
Confidence 001246899997664443
No 352
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.17 E-value=0.2 Score=42.23 Aligned_cols=98 Identities=13% Similarity=0.069 Sum_probs=59.2
Q ss_pred HhccCC------CeEEEecCCC-Ccch-HHHH-hc-CCCeEEEEeCChh---HHHHHHHHhccCccccccccCCCCCeEE
Q 024797 80 LYARRG------DVVLDLACGK-GGDL-IKWD-KA-KIGYYVGIDIAEG---SIEDCRTRYNGDADHHQRRKKFSFPARL 146 (262)
Q Consensus 80 ~~~~~~------~~vLDiGcG~-G~~~-~~l~-~~-~~~~v~gvD~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~v~~ 146 (262)
....++ ++||-+|+|. |..+ ..++ +. +..+|+++|.+++ -++.+++.-. +.
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa----------------~~ 225 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDA----------------TY 225 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTC----------------EE
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCC----------------cc
Confidence 345678 9999999864 6566 6666 54 3334999999988 7888765321 11
Q ss_pred EeCcccccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 147 ICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 147 ~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
+ |..+..+.......+.+|+|+-...- ...+..+.+.|+++|.++..
T Consensus 226 v--~~~~~~~~~i~~~~gg~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 226 V--DSRQTPVEDVPDVYEQMDFIYEATGF----------PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp E--ETTTSCGGGHHHHSCCEEEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred c--CCCccCHHHHHHhCCCCCEEEECCCC----------hHHHHHHHHHHhcCCEEEEE
Confidence 1 22111110000002379999854322 12467788999999998764
No 353
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.15 E-value=0.06 Score=45.02 Aligned_cols=95 Identities=17% Similarity=0.060 Sum_probs=58.4
Q ss_pred hccCCCeEEEecCC--CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc-ccc-
Q 024797 81 YARRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VHL- 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~- 156 (262)
...++.+||-.||+ .|..+..+++....+|+++|.+++.++.+++ +. .. ...|..+ ...
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g---------------~~-~~~d~~~~~~~~ 204 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IG---------------FD-AAFNYKTVNSLE 204 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT---------------CS-EEEETTSCSCHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC---------------Cc-EEEecCCHHHHH
Confidence 35678999999983 3555555555444489999999988887743 22 10 1112221 111
Q ss_pred ---ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 ---DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ---~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... ..+.+|+|+.+..- ..+....+.|++||++++.
T Consensus 205 ~~~~~~--~~~~~d~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 205 EALKKA--SPDGYDCYFDNVGG-----------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHHHHH--CTTCEEEEEESSCH-----------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHH--hCCCCeEEEECCCh-----------HHHHHHHHHHhcCCEEEEE
Confidence 111 12579999865532 1367788999999998764
No 354
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.14 E-value=0.08 Score=44.55 Aligned_cols=96 Identities=21% Similarity=0.116 Sum_probs=59.5
Q ss_pred hccCCCeEEEecCC--CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccc---ccc
Q 024797 81 YARRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY---EVH 155 (262)
Q Consensus 81 ~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~---~~~ 155 (262)
...++++||-.|++ .|..+..+++....+|+++|.+++.++.+++.-. ...+ |.. ++.
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~---------------~~~~--d~~~~~~~~ 228 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGG---------------EVFI--DFTKEKDIV 228 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTC---------------CEEE--ETTTCSCHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCC---------------ceEE--ecCccHhHH
Confidence 45688999999984 4555555655444489999999888877765211 0111 221 110
Q ss_pred --cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 --LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 --~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
..... . +.+|+|+..... ...+..+.+.|+++|+++..
T Consensus 229 ~~~~~~~-~-~~~D~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 229 GAVLKAT-D-GGAHGVINVSVS----------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HHHHHHH-T-SCEEEEEECSSC----------HHHHHHHTTSEEEEEEEEEC
T ss_pred HHHHHHh-C-CCCCEEEECCCc----------HHHHHHHHHHHhcCCEEEEE
Confidence 00011 1 279999865532 13567888999999998764
No 355
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.11 E-value=0.079 Score=44.52 Aligned_cols=97 Identities=14% Similarity=0.092 Sum_probs=60.5
Q ss_pred hccCCCeEEEecCC--CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--c
Q 024797 81 YARRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (262)
...++++||-.|++ .|..+..+++....+|++++.+++.++.+++.-. ..++..+ .++. .
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---------------~~v~~~~-~~~~~~v 219 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA---------------DIVLPLE-EGWAKAV 219 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---------------SEEEESS-TTHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---------------cEEecCc-hhHHHHH
Confidence 34678999999983 3666666666544489999999998888876422 1122222 1111 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+....-. .+..+.+.|+++|.+++.
T Consensus 220 ~~~~-~~~g~Dvvid~~g~~-----------~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 220 REAT-GGAGVDMVVDPIGGP-----------AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp HHHT-TTSCEEEEEESCC-------------CHHHHHHTEEEEEEEEEC
T ss_pred HHHh-CCCCceEEEECCchh-----------HHHHHHHhhcCCCEEEEE
Confidence 0011 234699998654322 356788899999998764
No 356
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.09 E-value=0.07 Score=46.20 Aligned_cols=47 Identities=9% Similarity=0.021 Sum_probs=39.7
Q ss_pred cCCCeEEEecCCCCcchHHHH-hc-C-CCeEEEEeCChhHHHHHHHHhcc
Q 024797 83 RRGDVVLDLACGKGGDLIKWD-KA-K-IGYYVGIDIAEGSIEDCRTRYNG 129 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~-~~-~-~~~v~gvD~s~~~~~~a~~~~~~ 129 (262)
.++..|+|+||+.|.++..++ +. + .++|+++|+++...+..+++...
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 578899999999999988876 32 3 36899999999999999988763
No 357
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.06 E-value=0.49 Score=35.56 Aligned_cols=103 Identities=16% Similarity=0.200 Sum_probs=59.0
Q ss_pred CCeEEEecCCC-CcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc-ccccC
Q 024797 85 GDVVLDLACGK-GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKVLA 161 (262)
Q Consensus 85 ~~~vLDiGcG~-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~ 161 (262)
+.+|+=+|||. |......+... ...|+++|.+++.++.+++. . +..+.+|..+... ... .
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~-g---------------~~~~~gd~~~~~~l~~~-~ 101 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE-G---------------RNVISGDATDPDFWERI-L 101 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT-T---------------CCEEECCTTCHHHHHTB-C
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC-C---------------CCEEEcCCCCHHHHHhc-c
Confidence 56899999874 43333333333 34799999999887776542 1 4556777654321 111 0
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
.-..+|+|++... +..... .+-...+.+.|++.++....+...
T Consensus 102 ~~~~ad~vi~~~~------~~~~~~-~~~~~~~~~~~~~~ii~~~~~~~~ 144 (183)
T 3c85_A 102 DTGHVKLVLLAMP------HHQGNQ-TALEQLQRRNYKGQIAAIAEYPDQ 144 (183)
T ss_dssp SCCCCCEEEECCS------SHHHHH-HHHHHHHHTTCCSEEEEEESSHHH
T ss_pred CCCCCCEEEEeCC------ChHHHH-HHHHHHHHHCCCCEEEEEECCHHH
Confidence 1245898886432 112222 233455566778888887766544
No 358
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.00 E-value=0.28 Score=42.49 Aligned_cols=102 Identities=17% Similarity=0.114 Sum_probs=66.0
Q ss_pred CCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 85 GDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 85 ~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
..+|+=+|+|. |..+...+......|+++|.+++.++.+++. . +.++.+|+.+....... .-
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~-g---------------~~vi~GDat~~~~L~~a-gi 66 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF-G---------------MKVFYGDATRMDLLESA-GA 66 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT-T---------------CCCEESCTTCHHHHHHT-TT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC-C---------------CeEEEcCCCCHHHHHhc-CC
Confidence 45789999865 4433433334444799999999999888742 2 56789998775432111 23
Q ss_pred CCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
...|+|++... + ......+....+.+.|...+++-..+..
T Consensus 67 ~~A~~viv~~~------~-~~~n~~i~~~ar~~~p~~~Iiara~~~~ 106 (413)
T 3l9w_A 67 AKAEVLINAID------D-PQTNLQLTEMVKEHFPHLQIIARARDVD 106 (413)
T ss_dssp TTCSEEEECCS------S-HHHHHHHHHHHHHHCTTCEEEEEESSHH
T ss_pred CccCEEEECCC------C-hHHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 56788876442 1 3344455666777888888888776654
No 359
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.99 E-value=0.49 Score=33.82 Aligned_cols=101 Identities=10% Similarity=-0.036 Sum_probs=58.2
Q ss_pred CCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 85 GDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 85 ~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
..+|+=+|||. |..+...+......|+++|.+++.++.+++. .+.++.+|..+....... .-
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~----------------~~~~~~gd~~~~~~l~~~-~~ 68 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE----------------GFDAVIADPTDESFYRSL-DL 68 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----------------TCEEEECCTTCHHHHHHS-CC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC----------------CCcEEECCCCCHHHHHhC-Cc
Confidence 45799999864 3322222223344799999999887776642 156788887664321111 23
Q ss_pred CCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
..+|+|++...- ......+....+.+. ...++....+..
T Consensus 69 ~~~d~vi~~~~~-------~~~n~~~~~~a~~~~-~~~iia~~~~~~ 107 (141)
T 3llv_A 69 EGVSAVLITGSD-------DEFNLKILKALRSVS-DVYAIVRVSSPK 107 (141)
T ss_dssp TTCSEEEECCSC-------HHHHHHHHHHHHHHC-CCCEEEEESCGG
T ss_pred ccCCEEEEecCC-------HHHHHHHHHHHHHhC-CceEEEEEcChh
Confidence 468988864431 222333344444555 667777666654
No 360
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.97 E-value=0.11 Score=43.38 Aligned_cols=98 Identities=17% Similarity=0.136 Sum_probs=59.6
Q ss_pred hccCCCeEEEecCC--CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--c
Q 024797 81 YARRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (262)
...++++||-.|++ .|..+..+++....+|+++|.+++.++.+++.-. ...+..+-.++. .
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---------------~~~~~~~~~~~~~~~ 209 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA---------------EYLINASKEDILRQV 209 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---------------SEEEETTTSCHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---------------cEEEeCCCchHHHHH
Confidence 34688999999953 3555556665444589999999988887766321 111211111110 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... .....+|+|+....- ..+..+.+.|+++|.++..
T Consensus 210 ~~~-~~~~g~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 210 LKF-TNGKGVDASFDSVGK-----------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp HHH-TTTSCEEEEEECCGG-----------GGHHHHHHHEEEEEEEEEC
T ss_pred HHH-hCCCCceEEEECCCh-----------HHHHHHHHHhccCCEEEEE
Confidence 000 023469999865432 2356778899999998764
No 361
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.79 E-value=0.14 Score=43.13 Aligned_cols=98 Identities=17% Similarity=0.001 Sum_probs=59.4
Q ss_pred hccCCCeEEEecCCC-CcchHHHHhcCCC-eEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--c
Q 024797 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (262)
.. ++++||-+|+|. |..+..+++.... +|+++|.+++.++.+++.-. ..++..+-.++. .
T Consensus 165 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga---------------~~~~~~~~~~~~~~v 228 (348)
T 2d8a_A 165 PI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA---------------DYVINPFEEDVVKEV 228 (348)
T ss_dssp CC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC---------------SEEECTTTSCHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC---------------CEEECCCCcCHHHHH
Confidence 34 788999999964 5555566654333 79999999988888875322 111111111110 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+..... ...+..+.+.|+++|.++..
T Consensus 229 ~~~~-~g~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 229 MDIT-DGNGVDVFLEFSGA----------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp HHHT-TTSCEEEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHHc-CCCCCCEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 0000 22369999865432 23567788899999998764
No 362
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.78 E-value=0.66 Score=32.72 Aligned_cols=102 Identities=17% Similarity=0.123 Sum_probs=54.6
Q ss_pred CCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 85 GDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 85 ~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
+.+|+=+|+|. |......+......|+++|.+++.++..++... +.++.+|..+....... .-
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~---------------~~~~~~d~~~~~~l~~~-~~ 67 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEID---------------ALVINGDCTKIKTLEDA-GI 67 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCS---------------SEEEESCTTSHHHHHHT-TT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcC---------------cEEEEcCCCCHHHHHHc-Cc
Confidence 45788888864 332222222333479999999887766654322 45566775433210000 12
Q ss_pred CCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
..+|+|++.-.. ......+..+.+.+.++ .+++...+..
T Consensus 68 ~~~d~vi~~~~~-------~~~~~~~~~~~~~~~~~-~ii~~~~~~~ 106 (140)
T 1lss_A 68 EDADMYIAVTGK-------EEVNLMSSLLAKSYGIN-KTIARISEIE 106 (140)
T ss_dssp TTCSEEEECCSC-------HHHHHHHHHHHHHTTCC-CEEEECSSTT
T ss_pred ccCCEEEEeeCC-------chHHHHHHHHHHHcCCC-EEEEEecCHh
Confidence 468998865322 22233444555667775 5666555543
No 363
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.68 E-value=0.18 Score=42.75 Aligned_cols=97 Identities=16% Similarity=0.043 Sum_probs=59.7
Q ss_pred hccCCCeEEEecC-C-CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--c
Q 024797 81 YARRGDVVLDLAC-G-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (262)
Q Consensus 81 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (262)
...++++||-.|+ | .|..+..+++....+|+++|.+++.++.+++.-. ..++..+-.++. .
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---------------~~~~~~~~~~~~~~~ 224 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGC---------------DRPINYKTEPVGTVL 224 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---------------SEEEETTTSCHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCC---------------cEEEecCChhHHHHH
Confidence 4568899999993 3 4666666666444489999999988888775311 111111111110 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... ....+|+|+....- ..+..+.+.|+++|.++..
T Consensus 225 ~~~--~~~g~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 225 KQE--YPEGVDVVYESVGG-----------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp HHH--CTTCEEEEEECSCT-----------HHHHHHHHHEEEEEEEEEC
T ss_pred HHh--cCCCCCEEEECCCH-----------HHHHHHHHHHhcCCEEEEE
Confidence 000 12469999865431 2567788999999998764
No 364
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.38 E-value=0.12 Score=43.63 Aligned_cols=97 Identities=16% Similarity=0.044 Sum_probs=59.6
Q ss_pred hccCCCeEEEecC-C-CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--c
Q 024797 81 YARRGDVVLDLAC-G-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (262)
Q Consensus 81 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (262)
...++++||-.|+ | .|..+..+++....+|+++|.+++.++.+++.-. ...+..+-.++. .
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~~~~~~~~~~~~~~ 228 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA---------------KRGINYRSEDFAAVI 228 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---------------SEEEETTTSCHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---------------CEEEeCCchHHHHHH
Confidence 3568899999954 3 3656666666544589999999999888876422 111111111110 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... ....+|+|+....-. .+....+.|+++|.++..
T Consensus 229 ~~~--~~~g~Dvvid~~g~~-----------~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 229 KAE--TGQGVDIILDMIGAA-----------YFERNIASLAKDGCLSII 264 (353)
T ss_dssp HHH--HSSCEEEEEESCCGG-----------GHHHHHHTEEEEEEEEEC
T ss_pred HHH--hCCCceEEEECCCHH-----------HHHHHHHHhccCCEEEEE
Confidence 001 135799998655432 356678899999998764
No 365
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.37 E-value=0.22 Score=42.26 Aligned_cols=97 Identities=14% Similarity=0.112 Sum_probs=57.9
Q ss_pred Hhcc-CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc-c
Q 024797 80 LYAR-RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-L 156 (262)
Q Consensus 80 ~~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~ 156 (262)
.... ++++||-+|+|. |..+..+++....+|+++|.+++.++.+++.+. . ..++ |..+.. .
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG-------------a-~~v~--~~~~~~~~ 245 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG-------------A-DSFL--VSRDQEQM 245 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC-------------C-SEEE--ETTCHHHH
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC-------------C-ceEE--eccCHHHH
Confidence 3455 889999999764 555555555444489999999988887764432 0 1111 111100 1
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.. ..+.+|+|+....... .+....+.|+++|.++..
T Consensus 246 ~~---~~~~~D~vid~~g~~~----------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 246 QA---AAGTLDGIIDTVSAVH----------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp HH---TTTCEEEEEECCSSCC----------CSHHHHHHEEEEEEEEEC
T ss_pred HH---hhCCCCEEEECCCcHH----------HHHHHHHHHhcCCEEEEE
Confidence 11 1246999986554321 124566788999998753
No 366
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.36 E-value=0.1 Score=43.75 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=59.4
Q ss_pred hccCCCeEEEecCC--CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--c
Q 024797 81 YARRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (262)
...++++||-.|++ .|..+..+++....+|+++|.+++.++.+++.+. ....+-..+..++. .
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g-------------~~~~~d~~~~~~~~~~~ 218 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG-------------FDDAFNYKEESDLTAAL 218 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSC-------------CSEEEETTSCSCSHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-------------CceEEecCCHHHHHHHH
Confidence 35678999999983 3655666655444489999999988888764332 00111111100110 1
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... ..+.+|+|+.+... ..+....+.|+++|.+++.
T Consensus 219 ~~~--~~~~~d~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 219 KRC--FPNGIDIYFENVGG-----------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHH--CTTCEEEEEESSCH-----------HHHHHHHTTEEEEEEEEEC
T ss_pred HHH--hCCCCcEEEECCCH-----------HHHHHHHHHHhcCCEEEEE
Confidence 111 12569999865421 2567788999999998764
No 367
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.30 E-value=0.16 Score=42.89 Aligned_cols=97 Identities=20% Similarity=0.107 Sum_probs=57.4
Q ss_pred Hhcc-CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeC-ccccccc
Q 024797 80 LYAR-RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG-DCYEVHL 156 (262)
Q Consensus 80 ~~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~ 156 (262)
.... ++++||-+|+|. |..+..+++....+|+++|.+++.++.+++.+. . -.++.. +...+
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lG---a-----------~~vi~~~~~~~~-- 238 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLG---A-----------DDYVIGSDQAKM-- 238 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSC---C-----------SCEEETTCHHHH--
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcC---C-----------ceeeccccHHHH--
Confidence 3445 889999999764 555555555433489999999988877763332 0 011111 11111
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.. ..+.+|+|+-...-.. .+....+.|+++|.++..
T Consensus 239 ~~---~~~g~D~vid~~g~~~----------~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 239 SE---LADSLDYVIDTVPVHH----------ALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp HH---STTTEEEEEECCCSCC----------CSHHHHTTEEEEEEEEEC
T ss_pred HH---hcCCCCEEEECCCChH----------HHHHHHHHhccCCEEEEe
Confidence 10 1246999986543321 135567899999998764
No 368
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.30 E-value=0.24 Score=41.48 Aligned_cols=96 Identities=15% Similarity=0.064 Sum_probs=59.7
Q ss_pred hccCCCeEEEecC--CCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc--
Q 024797 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-- 156 (262)
Q Consensus 81 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 156 (262)
...++.+||-.|+ |.|..+..+++....+|+++|.+++.++.+++.-. ...+ |..+..+
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga---------------~~~~--d~~~~~~~~ 225 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGA---------------DETV--NYTHPDWPK 225 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---------------SEEE--ETTSTTHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---------------CEEE--cCCcccHHH
Confidence 3457899999998 34656666665444489999999998888865321 0111 2111111
Q ss_pred --ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 --DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 --~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+.... . ..+..+.+.|+++|.++..
T Consensus 226 ~~~~~~-~~~~~d~vi~~~g-~----------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 226 EVRRLT-GGKGADKVVDHTG-A----------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp HHHHHT-TTTCEEEEEESSC-S----------SSHHHHHHHEEEEEEEEES
T ss_pred HHHHHh-CCCCceEEEECCC-H----------HHHHHHHHhhccCCEEEEE
Confidence 0011 2347999987654 2 1346678889999998764
No 369
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.28 E-value=0.24 Score=36.30 Aligned_cols=105 Identities=13% Similarity=0.123 Sum_probs=56.6
Q ss_pred cCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 83 RRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 83 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.++.+|+=+|||. |......+......|+++|.+++.++.++.. ..+.++.+|..+.......
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~---------------~g~~~~~~d~~~~~~l~~~- 80 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSE---------------FSGFTVVGDAAEFETLKEC- 80 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTT---------------CCSEEEESCTTSHHHHHTT-
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhc---------------CCCcEEEecCCCHHHHHHc-
Confidence 4678999999875 4433333333334799999988654433210 1134556665432210000
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
.-..+|+|+....- ......+..+.+.+.+...++....+..
T Consensus 81 ~~~~ad~Vi~~~~~-------~~~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 81 GMEKADMVFAFTND-------DSTNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp TGGGCSEEEECSSC-------HHHHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred CcccCCEEEEEeCC-------cHHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 12457988865422 2233344445555666677777666554
No 370
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.19 E-value=0.09 Score=43.57 Aligned_cols=91 Identities=14% Similarity=-0.014 Sum_probs=57.4
Q ss_pred HhccCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 80 LYARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
....++++||-.|+|. |..+..+++....+|++++ +++-++.+++.-. -.++ .|...+
T Consensus 138 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa---------------~~v~-~d~~~v---- 196 (315)
T 3goh_A 138 IPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGV---------------RHLY-REPSQV---- 196 (315)
T ss_dssp SCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTE---------------EEEE-SSGGGC----
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCC---------------CEEE-cCHHHh----
Confidence 3456889999999964 6666666664333899999 9988888876432 1122 131111
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
...+|+|+-...-. .+..+.+.|+++|+++..-
T Consensus 197 ----~~g~Dvv~d~~g~~-----------~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 197 ----TQKYFAIFDAVNSQ-----------NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ----CSCEEEEECC------------------TTGGGEEEEEEEEEEC
T ss_pred ----CCCccEEEECCCch-----------hHHHHHHHhcCCCEEEEEe
Confidence 46799997432211 1255788999999988763
No 371
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.83 E-value=0.27 Score=41.30 Aligned_cols=94 Identities=15% Similarity=0.134 Sum_probs=58.0
Q ss_pred CCCeEEEec-CCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--cccc
Q 024797 84 RGDVVLDLA-CGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LDKV 159 (262)
Q Consensus 84 ~~~~vLDiG-cG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~ 159 (262)
++.+||-.| +|. |..+..+++....+|+++|.+++-++.+++.-. ..++..+ .++. ....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~-~~~~~~~~~~ 213 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA---------------DIVLNHK-ESLLNQFKTQ 213 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC---------------SEEECTT-SCHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---------------cEEEECC-ccHHHHHHHh
Confidence 788999994 553 555666665444489999999998888887422 1111111 0110 0001
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
....+|+|+-...- ...+..+.+.|+++|.++..
T Consensus 214 --~~~g~Dvv~d~~g~----------~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 214 --GIELVDYVFCTFNT----------DMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp --TCCCEEEEEESSCH----------HHHHHHHHHHEEEEEEEEES
T ss_pred --CCCCccEEEECCCc----------hHHHHHHHHHhccCCEEEEE
Confidence 23579999854321 23567788999999998753
No 372
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.81 E-value=0.53 Score=39.36 Aligned_cols=103 Identities=15% Similarity=0.111 Sum_probs=60.0
Q ss_pred HHhccCCCeEEEecCCCCc-chHHHHh-cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc
Q 024797 79 QLYARRGDVVLDLACGKGG-DLIKWDK-AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL 156 (262)
Q Consensus 79 ~~~~~~~~~vLDiGcG~G~-~~~~l~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 156 (262)
.....++++||-+|+|++. ....+++ ....+|+++|.+++-++.+++.-.. .-+.....|..+. .
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~------------~~i~~~~~~~~~~-v 224 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD------------VTINSGDVNPVDE-I 224 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS------------EEEEC-CCCHHHH-H
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe------------EEEeCCCCCHHHH-h
Confidence 3445789999999998743 3334444 3456899999999988888765431 0011111121110 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|.++....- ...+....+.|+++|.+++.
T Consensus 225 ~~~t-~g~g~d~~~~~~~~----------~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 225 KKIT-GGLGVQSAIVCAVA----------RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp HHHT-TSSCEEEEEECCSC----------HHHHHHHHHTEEEEEEEEEC
T ss_pred hhhc-CCCCceEEEEeccC----------cchhheeheeecCCceEEEE
Confidence 0011 23357777643322 23567788899999998764
No 373
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=92.81 E-value=0.23 Score=42.45 Aligned_cols=62 Identities=15% Similarity=0.071 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc--------CCCeEEEEeCChhHHHHHHHHhc
Q 024797 67 KKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--------KIGYYVGIDIAEGSIEDCRTRYN 128 (262)
Q Consensus 67 ~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--------~~~~v~gvD~s~~~~~~a~~~~~ 128 (262)
+.+..|+...+.......+-.|+|+|.|.|.+...+++. ..-+++.||+|+...+.-++.+.
T Consensus 63 e~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 63 ELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp HHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 344455555555444334457999999999987766541 22379999999998887777665
No 374
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.61 E-value=0.43 Score=39.53 Aligned_cols=96 Identities=18% Similarity=0.071 Sum_probs=57.2
Q ss_pred HHHhccCCCeEEEec-CCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc-c
Q 024797 78 VQLYARRGDVVLDLA-CGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-V 154 (262)
Q Consensus 78 ~~~~~~~~~~vLDiG-cG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~ 154 (262)
......++++||-.| +|. |..+..+++....+|++++ +++.++.+++.-. -.++..+-.+ +
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa---------------~~~i~~~~~~~~ 209 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGA---------------EQCINYHEEDFL 209 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTC---------------SEEEETTTSCHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCC---------------CEEEeCCCcchh
Confidence 344567899999996 554 6666667665444888887 4555666665322 1122111111 1
Q ss_pred ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.. .-..+|+|+-.-.- + .+....+.|+++|.++..
T Consensus 210 ~~-----~~~g~D~v~d~~g~-------~----~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 210 LA-----ISTPVDAVIDLVGG-------D----VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp HH-----CCSCEEEEEESSCH-------H----HHHHHGGGEEEEEEEEEC
T ss_pred hh-----hccCCCEEEECCCc-------H----HHHHHHHhccCCCEEEEe
Confidence 11 12469999853321 1 236788999999998865
No 375
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.47 E-value=0.24 Score=41.69 Aligned_cols=96 Identities=13% Similarity=-0.017 Sum_probs=57.8
Q ss_pred hccCCCeEEEecCC--CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc--
Q 024797 81 YARRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-- 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 156 (262)
...++.+||-.|++ .|..+..+++....+|+++|.+++.++.+++.-. .. .+ |..+...
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~--------------~~-~~--~~~~~~~~~ 221 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA--------------AA-GF--NYKKEDFSE 221 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC--------------SE-EE--ETTTSCHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--------------cE-EE--ecCChHHHH
Confidence 34678999999853 3555555555444489999999988888854321 01 11 1111110
Q ss_pred --ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 --DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 --~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+.+..-. .+....+.|+++|.+++.
T Consensus 222 ~~~~~~-~~~~~d~vi~~~G~~-----------~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 222 ATLKFT-KGAGVNLILDCIGGS-----------YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp HHHHHT-TTSCEEEEEESSCGG-----------GHHHHHHHEEEEEEEEEC
T ss_pred HHHHHh-cCCCceEEEECCCch-----------HHHHHHHhccCCCEEEEE
Confidence 0001 234699998655432 246677889999998764
No 376
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.31 E-value=0.092 Score=44.10 Aligned_cols=96 Identities=17% Similarity=0.017 Sum_probs=57.1
Q ss_pred hccCCCeEEEecCCC-CcchHHHHhcCCC-eEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--c
Q 024797 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (262)
.. ++++||-+|+|. |..+..+++.... +|+++|.+++.++.+++. . ..++..+-.++. .
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a---------------~~v~~~~~~~~~~~~ 224 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A---------------DRLVNPLEEDLLEVV 224 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C---------------SEEECTTTSCHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H---------------HhccCcCccCHHHHH
Confidence 45 789999999854 5555566654433 799999998776666443 2 111111101110 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... ....+|+|+-...- ...+....+.|+++|.++..
T Consensus 225 ~~~--~~~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 225 RRV--TGSGVEVLLEFSGN----------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp HHH--HSSCEEEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHh--cCCCCCEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 000 12469999854432 13467788899999998764
No 377
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.20 E-value=0.14 Score=42.10 Aligned_cols=92 Identities=17% Similarity=0.075 Sum_probs=57.8
Q ss_pred ccCCCeEEEecC-C-CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccc-ccccc
Q 024797 82 ARRGDVVLDLAC-G-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VHLDK 158 (262)
Q Consensus 82 ~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 158 (262)
..++++||-.|+ | .|..+..+++....+|+++|.+++.++.+++.-. ...+ |..+ ..+..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---------------~~~~--~~~~~~~~~~ 185 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA---------------EEAA--TYAEVPERAK 185 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC---------------SEEE--EGGGHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---------------CEEE--ECCcchhHHH
Confidence 568899999998 3 3666666665444489999999988888765211 1111 2111 11110
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
. -..+|+|+. ..-. .+....+.|+++|+++..
T Consensus 186 ~---~~~~d~vid-~g~~-----------~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 186 A---WGGLDLVLE-VRGK-----------EVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp H---TTSEEEEEE-CSCT-----------THHHHHTTEEEEEEEEEC
T ss_pred H---hcCceEEEE-CCHH-----------HHHHHHHhhccCCEEEEE
Confidence 0 156999986 3321 356788999999998753
No 378
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.15 E-value=0.29 Score=45.29 Aligned_cols=119 Identities=13% Similarity=0.160 Sum_probs=65.0
Q ss_pred CCCeEEEecCCCCcchHHHHhc-----------CC--CeEEEEeC---ChhHHHHHHHHhccC-----------ccc--c
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA-----------KI--GYYVGIDI---AEGSIEDCRTRYNGD-----------ADH--H 134 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~-----------~~--~~v~gvD~---s~~~~~~a~~~~~~~-----------~~~--~ 134 (262)
+.-+|+|+|.|+|...+...+. .. -+++.+|. +.+.+..+-..+.+. ... .
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4469999999999876655431 11 25899998 444444433222211 000 0
Q ss_pred ccc---cCCCCCeEEEeCccccccccccc-CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024797 135 QRR---KKFSFPARLICGDCYEVHLDKVL-ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 135 ~~~---~~~~~~v~~~~~d~~~~~~~~~~-~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
... ......+++..+|+.+.- ..+. .....+|.++....--.. .+..=...++..+.+++++||.+.-
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l-~~~~~~~~~~~da~flD~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLL-PTLDDSLNNQVDAWFLDGFAPAK-NPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHG-GGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHH-hhcccccCCceeEEEECCCCCCC-ChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 000 011234667888875532 1110 014789999987632110 0000025688999999999998654
No 379
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.10 E-value=0.55 Score=36.43 Aligned_cols=98 Identities=11% Similarity=0.009 Sum_probs=58.1
Q ss_pred eEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 87 VVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 87 ~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
+|+=+|+| ..+..+++ .....|+++|.+++.++...+... +.++.+|..+....... .-
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~---------------~~~i~gd~~~~~~l~~a-~i 63 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLK---------------ATIIHGDGSHKEILRDA-EV 63 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSS---------------SEEEESCTTSHHHHHHH-TC
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcC---------------CeEEEcCCCCHHHHHhc-Cc
Confidence 46777764 45544433 334479999999988877654433 66789998764321110 12
Q ss_pred CCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
...|+|++...- ......+....+.+.+...++..+.+.
T Consensus 64 ~~ad~vi~~~~~-------d~~n~~~~~~a~~~~~~~~iia~~~~~ 102 (218)
T 3l4b_C 64 SKNDVVVILTPR-------DEVNLFIAQLVMKDFGVKRVVSLVNDP 102 (218)
T ss_dssp CTTCEEEECCSC-------HHHHHHHHHHHHHTSCCCEEEECCCSG
T ss_pred ccCCEEEEecCC-------cHHHHHHHHHHHHHcCCCeEEEEEeCc
Confidence 467888864322 233445555666666777777655443
No 380
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.90 E-value=0.24 Score=41.16 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=58.0
Q ss_pred hccCCCeEEEecCC--CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc--
Q 024797 81 YARRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-- 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 156 (262)
...++.+||-.|++ .|..+..+++....+|+++|.+++.++.+++.-. ...+ |..+...
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~---------------~~~~--~~~~~~~~~ 199 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA---------------WQVI--NYREEDLVE 199 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---------------SEEE--ETTTSCHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---------------CEEE--ECCCccHHH
Confidence 34578999999943 3555555554333489999999988888776321 0111 2111111
Q ss_pred --ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 --DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 --~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+.+..- ..+..+.+.|+++|.++..
T Consensus 200 ~~~~~~-~~~~~D~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 200 RLKEIT-GGKKVRVVYDSVGR-----------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp HHHHHT-TTCCEEEEEECSCG-----------GGHHHHHHTEEEEEEEEEC
T ss_pred HHHHHh-CCCCceEEEECCch-----------HHHHHHHHHhcCCCEEEEE
Confidence 0001 23469999876542 2357788899999998764
No 381
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.88 E-value=0.22 Score=41.24 Aligned_cols=90 Identities=13% Similarity=0.043 Sum_probs=56.3
Q ss_pred eEEEecC-C-CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCC
Q 024797 87 VVLDLAC-G-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (262)
Q Consensus 87 ~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (262)
+||-.|+ | .|..+..+++....+|++++.+++-++.+++.-.. ..+-..+... .... ..+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~--------------~vi~~~~~~~--~~~~--~~~ 210 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGAN--------------RILSRDEFAE--SRPL--EKQ 210 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCS--------------EEEEGGGSSC--CCSS--CCC
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC--------------EEEecCCHHH--HHhh--cCC
Confidence 4999997 3 36666677665444899999999999988764221 1111111111 1000 245
Q ss_pred CeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 165 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.+|+|+-.. .. ..+..+.+.|+++|+++..
T Consensus 211 ~~d~v~d~~-------g~----~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 211 LWAGAIDTV-------GD----KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp CEEEEEESS-------CH----HHHHHHHHTEEEEEEEEEC
T ss_pred CccEEEECC-------Cc----HHHHHHHHHHhcCCEEEEE
Confidence 799887432 11 2678889999999998864
No 382
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.79 E-value=0.44 Score=39.68 Aligned_cols=96 Identities=20% Similarity=0.227 Sum_probs=58.4
Q ss_pred hccCCCeEEEecC--CCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc--
Q 024797 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-- 156 (262)
Q Consensus 81 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 156 (262)
...++.+||-.|+ |.|..+..+++....+|+++|.+++.++.+++.-. .. .+ |..+...
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~--------------~~-~~--d~~~~~~~~ 204 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGC--------------HH-TI--NYSTQDFAE 204 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC--------------SE-EE--ETTTSCHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC--------------CE-EE--ECCCHHHHH
Confidence 3467889999996 34555555555444489999999988887765321 01 11 2111111
Q ss_pred --ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 --DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 --~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+.+..- ..+..+.+.|+++|.++..
T Consensus 205 ~i~~~~-~~~~~d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 205 VVREIT-GGKGVDVVYDSIGK-----------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp HHHHHH-TTCCEEEEEECSCT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred HHHHHh-CCCCCeEEEECCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 0000 13469999865432 2356788899999998764
No 383
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.48 E-value=1.6 Score=31.55 Aligned_cols=104 Identities=12% Similarity=-0.067 Sum_probs=59.9
Q ss_pred CCeEEEecCCCCcchHHHHh---cCCCeEEEEeCC-hhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIA-EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..+|+=+|+| ..+..+++ .....|+.+|.+ ++.++....... ..+.++.+|..+.......
T Consensus 3 ~~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-------------~~~~~i~gd~~~~~~l~~a 67 (153)
T 1id1_A 3 KDHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-------------DNADVIPGDSNDSSVLKKA 67 (153)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-------------TTCEEEESCTTSHHHHHHH
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-------------CCCeEEEcCCCCHHHHHHc
Confidence 3568888875 45444433 333479999997 454444443322 1277889998654321100
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
.-...|+|++...- ......+....+.+.|...++....+...
T Consensus 68 -~i~~ad~vi~~~~~-------d~~n~~~~~~a~~~~~~~~ii~~~~~~~~ 110 (153)
T 1id1_A 68 -GIDRCRAILALSDN-------DADNAFVVLSAKDMSSDVKTVLAVSDSKN 110 (153)
T ss_dssp -TTTTCSEEEECSSC-------HHHHHHHHHHHHHHTSSSCEEEECSSGGG
T ss_pred -ChhhCCEEEEecCC-------hHHHHHHHHHHHHHCCCCEEEEEECCHHH
Confidence 12467888864422 23344555666777777888887766543
No 384
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.39 E-value=0.44 Score=43.93 Aligned_cols=119 Identities=13% Similarity=0.104 Sum_probs=66.1
Q ss_pred CCCeEEEecCCCCcchHHHHhc-----------CC--CeEEEEeC---ChhHHHHHHHHhccC-----------cccccc
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA-----------KI--GYYVGIDI---AEGSIEDCRTRYNGD-----------ADHHQR 136 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~-----------~~--~~v~gvD~---s~~~~~~a~~~~~~~-----------~~~~~~ 136 (262)
+.-+|||+|-|+|......++. .. -++++++. +.+.+..+-..+.+. ......
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 3458999999999876654331 11 24899998 777776554432211 000000
Q ss_pred -----ccCCCCCeEEEeCccccccccccc-CCCCCeeEEEEcccccccCCCHHH-HHHHHHHHHhccCCCcEEEEE
Q 024797 137 -----RKKFSFPARLICGDCYEVHLDKVL-ADDAPFDICSCQFAMHYSWSTEAR-ARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 137 -----~~~~~~~v~~~~~d~~~~~~~~~~-~~~~~fD~V~~~~~l~~~~~~~~~-~~~~l~~~~~~L~~gG~li~~ 205 (262)
-......+++..+|+.+.- ..+. .....||+++....-... +++. -..++..+.+.++|||.+.-.
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l-~~~~~~~~~~~d~~~~D~f~p~~--np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELT-SQLDDSLNQKVDAWFLDGFAPAK--NPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHG-GGBCGGGTTCEEEEEECCSCGGG--CGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEecCCHHHHH-HhcccccCCcccEEEECCCCCcC--ChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 0001133556677765431 1110 014679999986632111 1111 256889999999999987643
No 385
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.32 E-value=0.6 Score=40.98 Aligned_cols=102 Identities=11% Similarity=0.073 Sum_probs=61.2
Q ss_pred CCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..+|+=+|||. .+..+++ .....|+.+|.+++.++.+.+.+. +..++||+.+.....-.
T Consensus 3 ~M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~---------------~~~i~Gd~~~~~~L~~A- 64 (461)
T 4g65_A 3 AMKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKYD---------------LRVVNGHASHPDVLHEA- 64 (461)
T ss_dssp CEEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS---------------CEEEESCTTCHHHHHHH-
T ss_pred cCEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC---------------cEEEEEcCCCHHHHHhc-
Confidence 45788888874 4444443 333369999999999998887765 77899998775532111
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
.-...|++++.-. .+...-+...+.+.+-+.-..+.-+.++++
T Consensus 65 gi~~ad~~ia~t~-------~De~Nl~~~~~Ak~~~~~~~~iar~~~~~~ 107 (461)
T 4g65_A 65 GAQDADMLVAVTN-------TDETNMAACQVAFTLFNTPNRIARIRSPQY 107 (461)
T ss_dssp TTTTCSEEEECCS-------CHHHHHHHHHHHHHHHCCSSEEEECCCHHH
T ss_pred CCCcCCEEEEEcC-------ChHHHHHHHHHHHHhcCCccceeEeccchh
Confidence 2356788875321 122233334455555455555555555443
No 386
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.31 E-value=0.22 Score=41.99 Aligned_cols=96 Identities=20% Similarity=0.137 Sum_probs=57.9
Q ss_pred hccCCCeEEEecCC--CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc--
Q 024797 81 YARRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-- 156 (262)
Q Consensus 81 ~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 156 (262)
...++++||-.|++ .|..+..+++....+|+++|.+++.++.+++.-. ...+ |..+...
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---------------~~~~--d~~~~~~~~ 229 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA---------------HEVF--NHREVNYID 229 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---------------SEEE--ETTSTTHHH
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCC---------------CEEE--eCCCchHHH
Confidence 34678999999973 3555555555444489999999988887654311 0111 1111111
Q ss_pred --ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 --DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 --~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+.+..- ..+....+.|+++|.++..
T Consensus 230 ~~~~~~-~~~~~D~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 230 KIKKYV-GEKGIDIIIEMLAN-----------VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HHHHHH-CTTCEEEEEESCHH-----------HHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHc-CCCCcEEEEECCCh-----------HHHHHHHHhccCCCEEEEE
Confidence 0000 23469999865421 2456778999999998764
No 387
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=91.22 E-value=0.6 Score=40.81 Aligned_cols=46 Identities=22% Similarity=0.214 Sum_probs=34.5
Q ss_pred hccCCCeEEEecC-CC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 024797 81 YARRGDVVLDLAC-GK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTR 126 (262)
Q Consensus 81 ~~~~~~~vLDiGc-G~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~ 126 (262)
...++++||-+|+ |. |..+..+++....++++++.+++-++.+++.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l 272 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM 272 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh
Confidence 3568899999998 43 6566666665555889999999888888764
No 388
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=91.10 E-value=0.37 Score=39.98 Aligned_cols=97 Identities=14% Similarity=0.034 Sum_probs=56.0
Q ss_pred ccCCC-eEEEecC-C-CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 82 ARRGD-VVLDLAC-G-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 82 ~~~~~-~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
..++. +||-.|+ | .|..+..+++....++++++.+++-++.+++.-.. ..+-..+........
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~--------------~~i~~~~~~~~~~~~ 211 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAK--------------EVLAREDVMAERIRP 211 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCS--------------EEEECC---------
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCc--------------EEEecCCcHHHHHHH
Confidence 45664 8999997 3 36666666664444799999998888888653210 001011110000000
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
. ..+.+|+|+-...-. .+....+.|+++|++++.
T Consensus 212 ~--~~~~~d~vid~~g~~-----------~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 212 L--DKQRWAAAVDPVGGR-----------TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp C--CSCCEEEEEECSTTT-----------THHHHHHTEEEEEEEEEC
T ss_pred h--cCCcccEEEECCcHH-----------HHHHHHHhhccCCEEEEE
Confidence 0 234699998543321 356778899999998764
No 389
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=91.01 E-value=0.43 Score=45.88 Aligned_cols=45 Identities=20% Similarity=0.175 Sum_probs=37.2
Q ss_pred CCCeEEEecCCCCcchHHHHhcCC-CeEEEEeCChhHHHHHHHHhc
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYN 128 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~ 128 (262)
...+++|+.||.|.++..+...+. ..+.++|+++.+++.-+.++.
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p 584 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP 584 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC
Confidence 345899999999999988866665 468899999999988887765
No 390
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=90.85 E-value=6.3 Score=32.85 Aligned_cols=121 Identities=8% Similarity=-0.028 Sum_probs=72.6
Q ss_pred CCCeEEEecCCCCcchHHHHhc--CCCeEEEEeCChhHHHHHHHHhccCccc-----------cccc---cCCCCCeEEE
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADH-----------HQRR---KKFSFPARLI 147 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----------~~~~---~~~~~~v~~~ 147 (262)
+...|+-+|||.=.....+... ....++=||.- +.++.=++.+.+.... .... .-...+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P-~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFP-MIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECH-HHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcH-HHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4568999999985544444332 23468888874 4444433333311000 0000 0013567889
Q ss_pred eCcccccccc-c----ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 148 CGDCYEVHLD-K----VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 148 ~~d~~~~~~~-~----~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
.+|+.+.... . .-+....--++++-+++.|+ +++....+++.+.+...+|..++....
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL--~~~~~~~ll~~ia~~f~~~~~i~yE~i 231 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYM--TPEQSANLLKWAANSFERAMFINYEQV 231 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGS--CHHHHHHHHHHHHHHCSSEEEEEEEEC
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCC--CHHHHHHHHHHHHHhCCCceEEEEecc
Confidence 9998764221 1 01134556788888999999 889999999999998766655555543
No 391
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=90.84 E-value=0.62 Score=40.38 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc------CCCeEEEEeCChhHHHHHHHHhc
Q 024797 68 KLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA------KIGYYVGIDIAEGSIEDCRTRYN 128 (262)
Q Consensus 68 ~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~~v~gvD~s~~~~~~a~~~~~ 128 (262)
.+..|+...+.... ...|+|+|.|+|.+...+++. ...+++.||+|+.+.+.-++++.
T Consensus 124 ~la~~~~~~~~~~g---~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 124 TLARPVAQALDASG---TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp HHHHHHHHHHHHHT---CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 34455555555442 469999999999987766541 13379999999999888887765
No 392
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=90.75 E-value=0.38 Score=40.83 Aligned_cols=98 Identities=19% Similarity=0.091 Sum_probs=55.9
Q ss_pred ccCCCeEEEec-CCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc
Q 024797 82 ARRGDVVLDLA-CGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 82 ~~~~~~vLDiG-cG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (262)
..++++||-.| +|. |..+..+++....+|++++ +++-++.+++.-. -.++.. .+..+...
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa---------------~~v~~~--~~~~~~~~ 242 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGA---------------DDVIDY--KSGSVEEQ 242 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTC---------------SEEEET--TSSCHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCC---------------CEEEEC--CchHHHHH
Confidence 46788999999 443 6666666664444799998 6777777654211 111111 11111000
Q ss_pred cCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
......+|+|+-...-. ...+....+.|+++|.++..-
T Consensus 243 ~~~~~g~D~vid~~g~~---------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 243 LKSLKPFDFILDNVGGS---------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp HHTSCCBSEEEESSCTT---------HHHHGGGGBCSSSCCEEEESC
T ss_pred HhhcCCCCEEEECCCCh---------hhhhHHHHHhhcCCcEEEEeC
Confidence 00224699998654321 123466778899999987643
No 393
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.55 E-value=0.69 Score=38.85 Aligned_cols=97 Identities=9% Similarity=-0.090 Sum_probs=58.8
Q ss_pred HhccCC--CeEEEecCCC--CcchHHHHhcCCC-eEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc
Q 024797 80 LYARRG--DVVLDLACGK--GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (262)
Q Consensus 80 ~~~~~~--~~vLDiGcG~--G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (262)
....++ .+||-.|++. |..+..+++.... +|+++|.+++.++.+++.+. ... ..|..+.
T Consensus 154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g---------------~~~-~~d~~~~ 217 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG---------------FDA-AINYKKD 217 (357)
T ss_dssp SCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC---------------CSE-EEETTTS
T ss_pred cCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---------------Cce-EEecCch
Confidence 345678 9999999843 5555555554444 89999999887777765332 110 1122111
Q ss_pred cc----ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 155 HL----DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 155 ~~----~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.. ... ..+.+|+|+.+..- ..+..+.+.|+++|++++.
T Consensus 218 ~~~~~~~~~--~~~~~d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 218 NVAEQLRES--CPAGVDVYFDNVGG-----------NISDTVISQMNENSHIILC 259 (357)
T ss_dssp CHHHHHHHH--CTTCEEEEEESCCH-----------HHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHh--cCCCCCEEEECCCH-----------HHHHHHHHHhccCcEEEEE
Confidence 11 011 12379999865431 3567788999999998763
No 394
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=90.30 E-value=0.35 Score=38.91 Aligned_cols=62 Identities=15% Similarity=0.280 Sum_probs=39.6
Q ss_pred eEEEeCcccccccccccCCCCCeeEEEEccccccc---CC---CH----HHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 144 ARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYS---WS---TE----ARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 144 v~~~~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~---~~---~~----~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
..++++|+.+.- .. .++++||+|++.--...- ++ +. ......+.++.++|+|||.+++...+
T Consensus 5 ~~l~~gD~~~~l-~~--l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d 76 (260)
T 1g60_A 5 NKIHQMNCFDFL-DQ--VENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP 76 (260)
T ss_dssp SSEEECCHHHHH-HH--SCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH
T ss_pred CeEEechHHHHH-Hh--ccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc
Confidence 457788875421 11 146789999987533210 00 11 24567888899999999999988644
No 395
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.15 E-value=0.48 Score=39.36 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=56.3
Q ss_pred ccCCC-eEEEecC-C-CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEe-Ccccccccc
Q 024797 82 ARRGD-VVLDLAC-G-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC-GDCYEVHLD 157 (262)
Q Consensus 82 ~~~~~-~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~-~d~~~~~~~ 157 (262)
..++. +||-.|+ | .|..+..+++....++++++.+++-++.+++.-.. ..+. .+.......
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~---------------~v~~~~~~~~~~~~ 211 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS---------------EVISREDVYDGTLK 211 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCS---------------EEEEHHHHCSSCCC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc---------------EEEECCCchHHHHH
Confidence 45564 8999998 3 35555566554334799999998888888763220 1111 110000000
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.. ....+|+|+-...- ..+....+.|+++|+++..
T Consensus 212 ~~--~~~~~d~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 212 AL--SKQQWQGAVDPVGG-----------KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp SS--CCCCEEEEEESCCT-----------HHHHHHHTTEEEEEEEEEC
T ss_pred Hh--hcCCccEEEECCcH-----------HHHHHHHHhhcCCCEEEEE
Confidence 00 23469998754321 1467788999999998764
No 396
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=90.14 E-value=0.75 Score=38.83 Aligned_cols=91 Identities=14% Similarity=-0.045 Sum_probs=55.2
Q ss_pred CCeEEEecCCC-CcchHHHHhcCCCeEEEEeCCh---hHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 85 GDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAE---GSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 85 ~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~---~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
+.+||-+|+|. |..+..+++....+|+++|.++ +.++.+++.- ...+ | .+ .+....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~g----------------a~~v--~-~~-~~~~~~ 240 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK----------------TNYY--N-SS-NGYDKL 240 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHT----------------CEEE--E-CT-TCSHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhC----------------Ccee--c-hH-HHHHHH
Confidence 89999999843 4444555543333899999998 7777776532 1112 2 22 110000
Q ss_pred -CCCCCeeEEEEcccccccCCCHHHHHHHH-HHHHhccCCCcEEEEE
Q 024797 161 -ADDAPFDICSCQFAMHYSWSTEARARRAL-ANVSALLRPGGTFIGT 205 (262)
Q Consensus 161 -~~~~~fD~V~~~~~l~~~~~~~~~~~~~l-~~~~~~L~~gG~li~~ 205 (262)
...+.+|+|+...... ..+ +.+.+.|+++|.++..
T Consensus 241 ~~~~~~~d~vid~~g~~----------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 241 KDSVGKFDVIIDATGAD----------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp HHHHCCEEEEEECCCCC----------THHHHHHGGGEEEEEEEEEC
T ss_pred HHhCCCCCEEEECCCCh----------HHHHHHHHHHHhcCCEEEEE
Confidence 0015699998655432 134 7788999999998764
No 397
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.60 E-value=2.8 Score=33.18 Aligned_cols=108 Identities=14% Similarity=0.117 Sum_probs=65.3
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc--
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-- 158 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|.+++.++...+.+. .++.++.+|+.+.....
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v~~~ 72 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEFG-------------PRVHALRSDIADLNEIAVL 72 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-------------GGEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-------------CcceEEEccCCCHHHHHHH
Confidence 5678998888765 5554433 233479999999887776665442 24788899987653210
Q ss_pred ---ccCCCCCeeEEEEcccccccCC----CHHHHHH-----------HHHHHHhccCCCcEEEEE
Q 024797 159 ---VLADDAPFDICSCQFAMHYSWS----TEARARR-----------ALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ---~~~~~~~fD~V~~~~~l~~~~~----~~~~~~~-----------~l~~~~~~L~~gG~li~~ 205 (262)
.....+..|+++.+......-+ +.++... +.+.+...++++|.++..
T Consensus 73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 73 GAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp HHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 0001257999998765432211 3333332 345566666778887765
No 398
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.60 E-value=1.4 Score=36.41 Aligned_cols=90 Identities=20% Similarity=0.109 Sum_probs=53.2
Q ss_pred CCeEEEecCCC-Cc-chHHHHhcCC-CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 85 GDVVLDLACGK-GG-DLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 85 ~~~vLDiGcG~-G~-~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..+|.=||+|. |. ++..+.+.+. ..|+++|.+++.++.+.+.-. +.-...|..+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~---------------~~~~~~~~~~~~------ 91 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI---------------IDEGTTSIAKVE------ 91 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS---------------CSEEESCTTGGG------
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC---------------cchhcCCHHHHh------
Confidence 36899999885 32 3333333333 279999999988877764311 111223332200
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEE
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li 203 (262)
-...|+|+..-.. .....++.++...++++..++
T Consensus 92 -~~~aDvVilavp~-------~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 92 -DFSPDFVMLSSPV-------RTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp -GGCCSEEEECSCG-------GGHHHHHHHHHHHSCTTCEEE
T ss_pred -hccCCEEEEeCCH-------HHHHHHHHHHhhccCCCcEEE
Confidence 1346999865433 234667888888898877554
No 399
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=89.33 E-value=0.48 Score=39.69 Aligned_cols=95 Identities=16% Similarity=0.077 Sum_probs=58.1
Q ss_pred hccCCCeEEEecC-C-CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--c
Q 024797 81 YARRGDVVLDLAC-G-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (262)
Q Consensus 81 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (262)
...++++||-+|+ | .|..+..+++....+|+++ .+++.++.+++.-. ..+. +-.++. .
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa----------------~~i~-~~~~~~~~~ 208 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGA----------------TPID-ASREPEDYA 208 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTS----------------EEEE-TTSCHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCC----------------CEec-cCCCHHHHH
Confidence 4568899999995 3 3666666666544489999 88888888766422 1121 111110 0
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ....+|+|+-...- ..+....+.|+++|.++..
T Consensus 209 ~~~~-~~~g~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 209 AEHT-AGQGFDLVYDTLGG-----------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp HHHH-TTSCEEEEEESSCT-----------HHHHHHHHHEEEEEEEEES
T ss_pred HHHh-cCCCceEEEECCCc-----------HHHHHHHHHHhcCCeEEEE
Confidence 0000 23479999854321 2567788899999998864
No 400
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.63 E-value=1.5 Score=34.27 Aligned_cols=99 Identities=8% Similarity=-0.064 Sum_probs=59.2
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
...+|+=+|+| ..+..+++ .... |+++|.+++.++.++ .. +.++.+|+.+.......
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~---------------~~~i~gd~~~~~~l~~a 67 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR--SG---------------ANFVHGDPTRVSDLEKA 67 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TT---------------CEEEESCTTCHHHHHHT
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cC---------------CeEEEcCCCCHHHHHhc
Confidence 34679999985 45555544 2223 899999998777665 22 67889998754321100
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
.-...|+|++... + ......+....+.+.|+..++..+.+..
T Consensus 68 -~i~~ad~vi~~~~------~-d~~n~~~~~~a~~~~~~~~iia~~~~~~ 109 (234)
T 2aef_A 68 -NVRGARAVIVDLE------S-DSETIHCILGIRKIDESVRIIAEAERYE 109 (234)
T ss_dssp -TCTTCSEEEECCS------C-HHHHHHHHHHHHHHCSSSEEEEECSSGG
T ss_pred -CcchhcEEEEcCC------C-cHHHHHHHHHHHHHCCCCeEEEEECCHh
Confidence 1246788886432 1 2233344555666788778887766543
No 401
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.21 E-value=1.5 Score=37.05 Aligned_cols=95 Identities=7% Similarity=0.001 Sum_probs=56.1
Q ss_pred cCCCeEEEecCC--CCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--ccc
Q 024797 83 RRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LDK 158 (262)
Q Consensus 83 ~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~ 158 (262)
.++.+||-.|++ .|.....+++....+|+++. +++-++.+++.-. ..++...-.++. ...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~v~~ 226 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGA---------------EEVFDYRAPNLAQTIRT 226 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTC---------------SEEEETTSTTHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCC---------------cEEEECCCchHHHHHHH
Confidence 678899999984 46666677665444788885 8888887765322 112221111110 001
Q ss_pred ccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhcc-CCCcEEEEE
Q 024797 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALL-RPGGTFIGT 205 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L-~~gG~li~~ 205 (262)
. ..+.+|+|+-.-.- ...+..+.+.| +++|+++..
T Consensus 227 ~--t~g~~d~v~d~~g~----------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 227 Y--TKNNLRYALDCITN----------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp H--TTTCCCEEEESSCS----------HHHHHHHHHHSCTTCEEEEES
T ss_pred H--ccCCccEEEECCCc----------hHHHHHHHHHhhcCCCEEEEE
Confidence 1 23459999854322 13456677788 699998764
No 402
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=88.18 E-value=1.3 Score=36.69 Aligned_cols=62 Identities=19% Similarity=0.279 Sum_probs=41.2
Q ss_pred eEEE-eCcccccccccccCCCCCeeEEEEccccccc---C---CC-HHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 144 ARLI-CGDCYEVHLDKVLADDAPFDICSCQFAMHYS---W---ST-EARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 144 v~~~-~~d~~~~~~~~~~~~~~~fD~V~~~~~l~~~---~---~~-~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
..++ ++|+.+.-- . .++++||+|++.--.... + .. .......+.++.++|+|||.+++.+..
T Consensus 39 ~~l~i~gD~l~~L~--~-l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 39 RHVYDVCDCLDTLA--K-LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp EEEEEECCHHHHHH--T-SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ceEEECCcHHHHHH--h-CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 5667 899865311 1 156789999987533210 0 00 134677888999999999999988754
No 403
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.18 E-value=2.5 Score=33.91 Aligned_cols=111 Identities=14% Similarity=0.060 Sum_probs=64.5
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCC------------hhHHHHHHHHhccCccccccccCCCCCeEEEe
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIA------------EGSIEDCRTRYNGDADHHQRRKKFSFPARLIC 148 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~ 148 (262)
.+.+||-.|++.| ++..+++ ....+|+.+|.+ .+.++.+...... ...++.++.
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 77 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK----------TGRKAYTAE 77 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH----------TTSCEEEEE
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh----------cCCceEEEE
Confidence 4678998888765 5544433 233479999987 5555555444331 134588899
Q ss_pred Ccccccccc-c----ccCCCCCeeEEEEcccccccC--CCHHHHH-----------HHHHHHHhccCCCcEEEEE
Q 024797 149 GDCYEVHLD-K----VLADDAPFDICSCQFAMHYSW--STEARAR-----------RALANVSALLRPGGTFIGT 205 (262)
Q Consensus 149 ~d~~~~~~~-~----~~~~~~~fD~V~~~~~l~~~~--~~~~~~~-----------~~l~~~~~~L~~gG~li~~ 205 (262)
+|+.+.... . ....-+..|+++.+....... .+.++.. .+++.+...++.+|.++..
T Consensus 78 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 78 VDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 998764321 0 000124789999877553210 1223332 2345666777778887764
No 404
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.05 E-value=3.8 Score=32.47 Aligned_cols=113 Identities=5% Similarity=-0.063 Sum_probs=65.8
Q ss_pred CCCeEEEecCC--CCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 84 RGDVVLDLACG--KGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 84 ~~~~vLDiGcG--~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
.+.++|-.|++ .| ++..+++ ....+|+.++.++...+.+.+...+.+ ..++.++.+|+.+.....
T Consensus 6 ~~k~vlVTGasg~~G-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~v~ 75 (266)
T 3oig_A 6 EGRNIVVMGVANKRS-IAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD---------RNDSIILPCDVTNDAEIE 75 (266)
T ss_dssp TTCEEEEECCCSTTS-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS---------SCCCEEEECCCSSSHHHH
T ss_pred CCCEEEEEcCCCCCc-HHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC---------CCCceEEeCCCCCHHHHH
Confidence 46789999876 33 4443332 233479999988776666655544211 225889999987653210
Q ss_pred -c----cCCCCCeeEEEEcccccc-------c-CCCHHHHH-----------HHHHHHHhccCCCcEEEEEe
Q 024797 159 -V----LADDAPFDICSCQFAMHY-------S-WSTEARAR-----------RALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 159 -~----~~~~~~fD~V~~~~~l~~-------~-~~~~~~~~-----------~~l~~~~~~L~~gG~li~~~ 206 (262)
. ....+..|+++.+..+.. + -.+.++.. .+++.+...++++|.++...
T Consensus 76 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 76 TCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 0 001257899998765432 0 01333333 24566777788888877653
No 405
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=87.79 E-value=1.1 Score=38.93 Aligned_cols=45 Identities=24% Similarity=0.296 Sum_probs=33.5
Q ss_pred hccCCCeEEEecC-CC-CcchHHHHhcCCCeEEEEeCChhHHHHHHH
Q 024797 81 YARRGDVVLDLAC-GK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRT 125 (262)
Q Consensus 81 ~~~~~~~vLDiGc-G~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~ 125 (262)
...++++||-.|+ |. |..+..+++....++++++.+++-++.+++
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 3568899999998 32 555666666555588999999988888865
No 406
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.33 E-value=0.39 Score=40.79 Aligned_cols=100 Identities=10% Similarity=0.070 Sum_probs=52.8
Q ss_pred CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
++.+|+-+|+|. |......+.....+|+++|.+++.++.+.+... ..+.....+..++. ..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g-------------~~~~~~~~~~~~l~--~~--- 226 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG-------------GRVITLTATEANIK--KS--- 226 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT-------------TSEEEEECCHHHHH--HH---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC-------------ceEEEecCCHHHHH--HH---
Confidence 468999999863 333333333333389999999988777765432 11211111111111 01
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
-..+|+|+........ ..+..+.++..+.+++||.++..
T Consensus 227 ~~~~DvVi~~~g~~~~----~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 227 VQHADLLIGAVLVPGA----KAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp HHHCSEEEECCC-----------CCSCHHHHTTSCTTCEEEEC
T ss_pred HhCCCEEEECCCCCcc----ccchhHHHHHHHhhcCCCEEEEE
Confidence 1357999865443210 11112245677888999987653
No 407
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.18 E-value=4.3 Score=32.85 Aligned_cols=112 Identities=16% Similarity=0.111 Sum_probs=64.3
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChh-HHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEG-SIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~-~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 158 (262)
.+.+||-.|++.| ++..+++ ....+|+.+|.+.. ..+...+... ....++.++.+|+.+.....
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~~Dv~d~~~v~~ 114 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE----------KEGVKCVLLPGDLSDEQHCKD 114 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH----------TTTCCEEEEESCTTSHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH----------hcCCcEEEEECCCCCHHHHHH
Confidence 5678999998765 5554433 23347889988765 3333333333 12345888999987643210
Q ss_pred ----ccCCCCCeeEEEEcccccccCC-----CHHHHH-----------HHHHHHHhccCCCcEEEEEe
Q 024797 159 ----VLADDAPFDICSCQFAMHYSWS-----TEARAR-----------RALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 159 ----~~~~~~~fD~V~~~~~l~~~~~-----~~~~~~-----------~~l~~~~~~L~~gG~li~~~ 206 (262)
....-+..|+++.+........ +.++.. .+++.+...++.+|.++...
T Consensus 115 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 115 IVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 0001257899998754432111 333332 34556677778888877653
No 408
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=87.12 E-value=2.8 Score=34.72 Aligned_cols=98 Identities=7% Similarity=-0.089 Sum_probs=60.4
Q ss_pred CCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..+|+=+|+| ..+..+++ .... |+.+|.+++.++ +++ . .+.++.+|+.+.......
T Consensus 115 ~~~viI~G~G--~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-~---------------~~~~i~gd~~~~~~L~~a- 173 (336)
T 1lnq_A 115 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKK-VLR-S---------------GANFVHGDPTRVSDLEKA- 173 (336)
T ss_dssp -CEEEEESCC--HHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-T---------------TCEEEESCTTSHHHHHHT-
T ss_pred cCCEEEECCc--HHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-C---------------CcEEEEeCCCCHHHHHhc-
Confidence 4578888875 45555544 2333 999999998887 543 1 277899998765421111
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
.-...|.|++... + +..........+.+.|...++....+.+
T Consensus 174 ~i~~a~~vi~~~~------~-d~~n~~~~~~ar~~~~~~~iiar~~~~~ 215 (336)
T 1lnq_A 174 NVRGARAVIVDLE------S-DSETIHCILGIRKIDESVRIIAEAERYE 215 (336)
T ss_dssp CSTTEEEEEECCS------S-HHHHHHHHHHHHTTCTTSEEEEECSSGG
T ss_pred ChhhccEEEEcCC------c-cHHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 2356888886431 1 2333344556677788878887765543
No 409
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.33 E-value=0.25 Score=42.23 Aligned_cols=44 Identities=11% Similarity=0.142 Sum_probs=30.5
Q ss_pred CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHh
Q 024797 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRY 127 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~ 127 (262)
++.+|+=+|+|. |......++....+|+++|.+++.++.+++.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~ 211 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF 211 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc
Confidence 578999999964 43344444333338999999998887776643
No 410
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=86.19 E-value=2.5 Score=29.67 Aligned_cols=101 Identities=10% Similarity=-0.032 Sum_probs=51.9
Q ss_pred CCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..+|+=+|+|. .+..+++ .....|+++|.+++.++.+++. ...++.+|..+.......
T Consensus 6 ~~~v~I~G~G~--iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~----------------~~~~~~~d~~~~~~l~~~- 66 (144)
T 2hmt_A 6 NKQFAVIGLGR--FGGSIVKELHRMGHEVLAVDINEEKVNAYASY----------------ATHAVIANATEENELLSL- 66 (144)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT----------------CSEEEECCTTCHHHHHTT-
T ss_pred CCcEEEECCCH--HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------------CCEEEEeCCCCHHHHHhc-
Confidence 45799999853 4443332 2334689999987654433211 134566776542210000
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChHH
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~~ 211 (262)
.-..+|+|+...... ......+....+.+.+. .+++...+...
T Consensus 67 ~~~~~d~vi~~~~~~------~~~~~~~~~~~~~~~~~-~ii~~~~~~~~ 109 (144)
T 2hmt_A 67 GIRNFEYVIVAIGAN------IQASTLTTLLLKELDIP-NIWVKAQNYYH 109 (144)
T ss_dssp TGGGCSEEEECCCSC------HHHHHHHHHHHHHTTCS-EEEEECCSHHH
T ss_pred CCCCCCEEEECCCCc------hHHHHHHHHHHHHcCCC-eEEEEeCCHHH
Confidence 124689988654321 11222334444556665 66666665543
No 411
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=85.98 E-value=2.5 Score=34.20 Aligned_cols=108 Identities=14% Similarity=0.024 Sum_probs=67.0
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc--
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-- 158 (262)
+++.+|--|++.| ++..+++ ....+|+.+|.+++.++.+.+.+. .++..+++|+.+.....
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g-------------~~~~~~~~Dv~~~~~v~~~ 93 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG-------------GGAVGIQADSANLAELDRL 93 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-------------TTCEEEECCTTCHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-------------CCeEEEEecCCCHHHHHHH
Confidence 5788898898877 5554433 234489999999988887765543 24677889987643210
Q ss_pred ---ccCCCCCeeEEEEcccccccCC----CHHHHHH-----------HHHHHHhccCCCcEEEEE
Q 024797 159 ---VLADDAPFDICSCQFAMHYSWS----TEARARR-----------ALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ---~~~~~~~fD~V~~~~~l~~~~~----~~~~~~~-----------~l~~~~~~L~~gG~li~~ 205 (262)
....-++.|+++.+.......+ +.++.++ ..+.+...++.+|.++..
T Consensus 94 ~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 94 YEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp HHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 1112378999998765432210 3333322 345566677888887654
No 412
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=85.65 E-value=12 Score=29.96 Aligned_cols=83 Identities=8% Similarity=-0.126 Sum_probs=52.5
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccc-ccc-c
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLD-K 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~-~ 158 (262)
.+.+||-.|++.| ++..+++ ....+|++++.++...+.+.+.+... ...++.++.+|+.+. ... .
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dl~~~~~~v~~ 80 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS---------NHENVVFHQLDVTDPIATMSS 80 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------TCCSEEEEECCTTSCHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------CCCceEEEEccCCCcHHHHHH
Confidence 4678888888765 5554443 23347999999988777766655421 134588999998775 210 0
Q ss_pred ----ccCCCCCeeEEEEccccc
Q 024797 159 ----VLADDAPFDICSCQFAMH 176 (262)
Q Consensus 159 ----~~~~~~~fD~V~~~~~l~ 176 (262)
.....+..|+++.+..+.
T Consensus 81 ~~~~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 81 LADFIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHhCCCCCEEEECCccc
Confidence 000125789999887653
No 413
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=85.56 E-value=1.2 Score=39.35 Aligned_cols=89 Identities=11% Similarity=-0.056 Sum_probs=53.9
Q ss_pred ccCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 82 ARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 82 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
..++.+|+-+|+|. |......++....+|+++|.++..++.+++.- +.. .++.+. .
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G----------------a~~--~~l~e~-l---- 327 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG----------------FDV--VTVEEA-I---- 327 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT----------------CEE--CCHHHH-G----
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC----------------CEE--ecHHHH-H----
Confidence 35788999999975 44444444433348999999998777665421 121 222221 1
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
...|+|+..-.-.+++ . .+..+.+++||+++..
T Consensus 328 ---~~aDvVi~atgt~~~i-~--------~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 328 ---GDADIVVTATGNKDII-M--------LEHIKAMKDHAILGNI 360 (494)
T ss_dssp ---GGCSEEEECSSSSCSB-C--------HHHHHHSCTTCEEEEC
T ss_pred ---hCCCEEEECCCCHHHH-H--------HHHHHhcCCCcEEEEe
Confidence 3579998764333321 1 2455678999988754
No 414
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=85.09 E-value=0.66 Score=43.56 Aligned_cols=45 Identities=18% Similarity=0.138 Sum_probs=36.4
Q ss_pred CCCeEEEecCCCCcchHHHHhcC------CCeEEEEeCChhHHHHHHHHhc
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAK------IGYYVGIDIAEGSIEDCRTRYN 128 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~------~~~v~gvD~s~~~~~~a~~~~~ 128 (262)
+..+|||+-||.|.++.-+...+ ...+.++|+++.+++.-+.++.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 34689999999999988775433 4458899999999999888865
No 415
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=85.04 E-value=6 Score=32.01 Aligned_cols=112 Identities=10% Similarity=-0.067 Sum_probs=63.3
Q ss_pred CCCeEEEecCCCC-cchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-
Q 024797 84 RGDVVLDLACGKG-GDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G-~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 158 (262)
.+.++|-.|++.| .++..+++ ....+|+.++.++...+.+.+.... ..++.++.+|+.+.....
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~Dv~d~~~v~~ 98 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE-----------LGAFVAGHCDVADAASIDA 98 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH-----------HTCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------cCCceEEECCCCCHHHHHH
Confidence 5678999997633 13333322 2334789999887655554443321 123778899987643210
Q ss_pred ----ccCCCCCeeEEEEcccccc-------c-CCCHHHHH-----------HHHHHHHhccCCCcEEEEEe
Q 024797 159 ----VLADDAPFDICSCQFAMHY-------S-WSTEARAR-----------RALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 159 ----~~~~~~~fD~V~~~~~l~~-------~-~~~~~~~~-----------~~l~~~~~~L~~gG~li~~~ 206 (262)
....-+..|+++.+..+.. + -.+.++.. .+++.+...++.+|.++...
T Consensus 99 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 99 VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 0001257899998776532 0 01233332 34556667777788877653
No 416
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=84.86 E-value=1.9 Score=42.84 Aligned_cols=45 Identities=20% Similarity=0.168 Sum_probs=36.9
Q ss_pred CCCeEEEecCCCCcchHHHHhcCC-CeEEEEeCChhHHHHHHHHhc
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYN 128 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~ 128 (262)
...+++|+.||.|.+...+...+. ..+.++|+++.+++.-+.++.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p 895 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP 895 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC
Confidence 345899999999999988866664 458899999999988877764
No 417
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.54 E-value=4.2 Score=32.22 Aligned_cols=82 Identities=16% Similarity=0.084 Sum_probs=51.6
Q ss_pred CCCeEEEecC-CCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-
Q 024797 84 RGDVVLDLAC-GKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK- 158 (262)
Q Consensus 84 ~~~~vLDiGc-G~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 158 (262)
.+.+||-.|+ |.| ++..+++ ....+|+.+|.++..++...+.+.+. ...++.++.+|+.+.....
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dl~~~~~v~~ 90 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADL---------GLGRVEAVVCDVTSTEAVDA 90 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------CSSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc---------CCCceEEEEeCCCCHHHHHH
Confidence 4678998887 555 4443332 23347999999988877776665421 1346889999987643210
Q ss_pred c----cCCCCCeeEEEEcccc
Q 024797 159 V----LADDAPFDICSCQFAM 175 (262)
Q Consensus 159 ~----~~~~~~fD~V~~~~~l 175 (262)
. ....++.|+++.+..+
T Consensus 91 ~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 91 LITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHhCCCcEEEECCCc
Confidence 0 0012578999988764
No 418
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=84.46 E-value=6.2 Score=31.52 Aligned_cols=87 Identities=14% Similarity=0.083 Sum_probs=50.2
Q ss_pred eEEEecCCC-CcchH-HHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCC
Q 024797 87 VVLDLACGK-GGDLI-KWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (262)
Q Consensus 87 ~vLDiGcG~-G~~~~-~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (262)
+|.=||||. |.... .+.+.+. .|+++|.+++.++.+.+. . . . .. ...|..+ . .
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~-g---~--------~--~~-~~~~~~~--------~-~ 56 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVER-Q---L--------V--DE-AGQDLSL--------L-Q 56 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT-T---S--------C--SE-EESCGGG--------G-T
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhC-C---C--------C--cc-ccCCHHH--------h-C
Confidence 577788875 33222 2323333 799999999877766432 1 0 0 01 1222221 1 3
Q ss_pred CeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 165 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
..|+|+..- +......++.++...++++..+ +++
T Consensus 57 ~~D~vi~av-------~~~~~~~~~~~l~~~~~~~~~v-v~~ 90 (279)
T 2f1k_A 57 TAKIIFLCT-------PIQLILPTLEKLIPHLSPTAIV-TDV 90 (279)
T ss_dssp TCSEEEECS-------CHHHHHHHHHHHGGGSCTTCEE-EEC
T ss_pred CCCEEEEEC-------CHHHHHHHHHHHHhhCCCCCEE-EEC
Confidence 579888644 3345677888888888887654 555
No 419
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=84.46 E-value=6.8 Score=31.34 Aligned_cols=88 Identities=20% Similarity=0.154 Sum_probs=50.1
Q ss_pred eEEEecCCC-CcchHH-HHhcCC-CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 87 VVLDLACGK-GGDLIK-WDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 87 ~vLDiGcG~-G~~~~~-l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
+|.=||+|. |..... +...+. ..|+++|.+++.++.+++.-. ......|..+. -
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~---------------~~~~~~~~~~~--------~ 59 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI---------------IDEGTTSIAKV--------E 59 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS---------------CSEEESCGGGG--------G
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCC---------------cccccCCHHHH--------h
Confidence 577888875 333322 322232 269999999988776653210 00012222111 1
Q ss_pred C-CeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024797 164 A-PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 164 ~-~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
. ..|+|+..- +......++.++...++++..++.
T Consensus 60 ~~~aDvVilav-------p~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 60 DFSPDFVMLSS-------PVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp GTCCSEEEECS-------CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cCCCCEEEEcC-------CHHHHHHHHHHHHhhCCCCcEEEE
Confidence 3 579988643 334456778888888988875543
No 420
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.41 E-value=5.2 Score=32.42 Aligned_cols=111 Identities=13% Similarity=0.020 Sum_probs=63.4
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCCh--hHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAE--GSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|.+. ...+...+.... ...++.++.+|+.+.....
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~d~~~v~ 116 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE----------CGRKAVLLPGDLSDESFAR 116 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH----------TTCCEEECCCCTTSHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH----------cCCcEEEEEecCCCHHHHH
Confidence 4678999998765 5554443 2334788888763 334444433331 1345888899987643210
Q ss_pred -----ccCCCCCeeEEEEcccccccCC-----CHHHHH-----------HHHHHHHhccCCCcEEEEE
Q 024797 159 -----VLADDAPFDICSCQFAMHYSWS-----TEARAR-----------RALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 -----~~~~~~~fD~V~~~~~l~~~~~-----~~~~~~-----------~~l~~~~~~L~~gG~li~~ 205 (262)
....-+..|+++.+........ +.++.. .+++.+...++++|.++..
T Consensus 117 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 117 SLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 0001257899998776532111 233332 3455667778888887765
No 421
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=84.27 E-value=0.41 Score=40.53 Aligned_cols=44 Identities=18% Similarity=0.088 Sum_probs=30.3
Q ss_pred CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHh
Q 024797 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRY 127 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~ 127 (262)
++.+||=+|+|. |......++....+|+++|.+++-++.+.+..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~ 210 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF 210 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh
Confidence 357999999964 43344444432238999999998888877654
No 422
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=83.99 E-value=3.6 Score=33.39 Aligned_cols=111 Identities=9% Similarity=-0.032 Sum_probs=62.9
Q ss_pred CCCeEEEecCCC-CcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-
Q 024797 84 RGDVVLDLACGK-GGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 158 (262)
.+.++|-.|++. ..++..+++ ....+|+.+|.++...+.+.+.... ...+.++.+|+.+.....
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES-----------LGVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-----------HTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-----------cCCeEEEEcCCCCHHHHHH
Confidence 467899999864 124443332 2334799999987665555444331 112678899987643210
Q ss_pred c----cCCCCCeeEEEEccccccc--------CCCHHHHH-----------HHHHHHHhccCCCcEEEEE
Q 024797 159 V----LADDAPFDICSCQFAMHYS--------WSTEARAR-----------RALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ~----~~~~~~fD~V~~~~~l~~~--------~~~~~~~~-----------~~l~~~~~~L~~gG~li~~ 205 (262)
. ...-+..|+++.+..+... -.+.++.. .+++.+...++.+|.++..
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~i 167 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTL 167 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 0 0012578999987765321 01333332 2445566677778887765
No 423
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.90 E-value=7.9 Score=30.52 Aligned_cols=112 Identities=7% Similarity=-0.123 Sum_probs=64.4
Q ss_pred cCCCeEEEecCC-CCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 83 RRGDVVLDLACG-KGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 83 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
.++.+||-.|++ +|.++..+++ ....+|+.++.+....+.+++...+ ...+.++.+|+.+.....
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~ 80 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE-----------FGSELVFPCDVADDAQID 80 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-----------TTCCCEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH-----------cCCcEEEECCCCCHHHHH
Confidence 467899999975 2335554443 2334799999887665555544331 123778899987643210
Q ss_pred -----ccCCCCCeeEEEEccccccc-------C--CCHHHHHH-----------HHHHHHhccCCCcEEEEE
Q 024797 159 -----VLADDAPFDICSCQFAMHYS-------W--STEARARR-----------ALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 -----~~~~~~~fD~V~~~~~l~~~-------~--~~~~~~~~-----------~l~~~~~~L~~gG~li~~ 205 (262)
.....+..|+++.+..+... . .+.++... +++.+...++++|.++..
T Consensus 81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 152 (271)
T 3ek2_A 81 ALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTL 152 (271)
T ss_dssp HHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEE
Confidence 00012579999987755321 0 13344332 345566666677877654
No 424
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=83.65 E-value=5.9 Score=31.52 Aligned_cols=112 Identities=18% Similarity=0.035 Sum_probs=63.6
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeC-ChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDI-AEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 158 (262)
.+.++|-.|++.| ++..+++ ....+|+.++. +.+.++...+.+.. ...++.++.+|+.+.....
T Consensus 17 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~ 85 (270)
T 3is3_A 17 DGKVALVTGSGRG-IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA----------LGSDAIAIKADIRQVPEIVK 85 (270)
T ss_dssp TTCEEEESCTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----------TTCCEEEEECCTTSHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh----------cCCcEEEEEcCCCCHHHHHH
Confidence 4678898888765 5544433 23336777765 44445554444431 1345888999987643210
Q ss_pred c----cCCCCCeeEEEEcccccccCC----CHHHHH-----------HHHHHHHhccCCCcEEEEEe
Q 024797 159 V----LADDAPFDICSCQFAMHYSWS----TEARAR-----------RALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 159 ~----~~~~~~fD~V~~~~~l~~~~~----~~~~~~-----------~~l~~~~~~L~~gG~li~~~ 206 (262)
. ...-+..|+++.+......-. +.++.. .+.+.+...++++|.+++..
T Consensus 86 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 86 LFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 0 001257899997765432211 333332 34556777788888877653
No 425
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=83.56 E-value=1.8 Score=36.18 Aligned_cols=96 Identities=9% Similarity=-0.018 Sum_probs=52.5
Q ss_pred cCC-CeEEEe-cCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--cc
Q 024797 83 RRG-DVVLDL-ACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LD 157 (262)
Q Consensus 83 ~~~-~~vLDi-GcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~ 157 (262)
.++ .+||=. |+|. |..+..+++....+|+++|.+++-++.+++.-. ...+..+-.++. ..
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga---------------~~~~~~~~~~~~~~v~ 226 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGA---------------AHVLNEKAPDFEATLR 226 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTC---------------SEEEETTSTTHHHHHH
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---------------CEEEECCcHHHHHHHH
Confidence 345 566654 3332 444555555433489999999998888876422 111211111110 00
Q ss_pred cccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 158 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
... ....+|+|+-...- . .+..+.+.|+++|.+++.
T Consensus 227 ~~~-~~~g~D~vid~~g~-------~----~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 227 EVM-KAEQPRIFLDAVTG-------P----LASAIFNAMPKRARWIIY 262 (349)
T ss_dssp HHH-HHHCCCEEEESSCH-------H----HHHHHHHHSCTTCEEEEC
T ss_pred HHh-cCCCCcEEEECCCC-------h----hHHHHHhhhcCCCEEEEE
Confidence 000 11368999854432 1 236677899999998864
No 426
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=82.83 E-value=21 Score=30.22 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=60.3
Q ss_pred cCCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
..+.+||.++-+-|.++..+ .....++.+.-|.-.....+.+ +..+.. . ..... +
T Consensus 44 ~~~~~~l~~n~~~g~~~~~~--~~~~~~~~~~~~~~~~~~l~~~--------------~~~~~~-~---~~~~~-----~ 98 (381)
T 3dmg_A 44 PFGERALDLNPGVGWGSLPL--EGRMAVERLETSRAAFRCLTAS--------------GLQARL-A---LPWEA-----A 98 (381)
T ss_dssp CCSSEEEESSCTTSTTTGGG--BTTBEEEEEECBHHHHHHHHHT--------------TCCCEE-C---CGGGS-----C
T ss_pred HhCCcEEEecCCCCcccccc--CCCCceEEEeCcHHHHHHHHHc--------------CCCccc-c---CCccC-----C
Confidence 34578999999999877766 2234666665454333332211 111211 1 11111 3
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCChH
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~~ 210 (262)
+..||+|++...-+ ......+..|.++.+.|++||.+++.-.+..
T Consensus 99 ~~~~d~v~~~~Pk~---k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~ 143 (381)
T 3dmg_A 99 AGAYDLVVLALPAG---RGTAYVQASLVAAARALRMGGRLYLAGDKNK 143 (381)
T ss_dssp TTCEEEEEEECCGG---GCHHHHHHHHHHHHHHEEEEEEEEEEEEGGG
T ss_pred cCCCCEEEEECCcc---hhHHHHHHHHHHHHHhCCCCCEEEEEEccHH
Confidence 57899998654321 0223567889999999999999988775544
No 427
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=82.57 E-value=2 Score=30.66 Aligned_cols=42 Identities=10% Similarity=-0.020 Sum_probs=26.7
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHh
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRY 127 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~ 127 (262)
.+.+|+=+|||. .+..++. .....++.+|.+++..+...+.+
T Consensus 20 ~~~~v~iiG~G~--iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~ 64 (144)
T 3oj0_A 20 GGNKILLVGNGM--LASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY 64 (144)
T ss_dssp CCCEEEEECCSH--HHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred cCCEEEEECCCH--HHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence 488999999864 3333332 22224999999987766544433
No 428
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=82.56 E-value=5 Score=31.63 Aligned_cols=112 Identities=12% Similarity=0.082 Sum_probs=62.5
Q ss_pred CCCeEEEecCCCCcchHHHHh---c-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-c
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---A-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (262)
++.+||-.|++. .++..+++ . ....|++++.++..++...+.+... ..++.++.+|+.+.... .
T Consensus 3 ~~k~vlITGasg-gIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~~~~ 71 (276)
T 1wma_A 3 GIHVALVTGGNK-GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE----------GLSPRFHQLDIDDLQSIRA 71 (276)
T ss_dssp CCCEEEESSCSS-HHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT----------TCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc----------CCeeEEEECCCCCHHHHHH
Confidence 456788777654 45555443 2 3447999999887666655544311 23478889998764311 0
Q ss_pred cc----CCCCCeeEEEEcccccccC---CC-HHHHH-----------HHHHHHHhccCCCcEEEEEe
Q 024797 159 VL----ADDAPFDICSCQFAMHYSW---ST-EARAR-----------RALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 159 ~~----~~~~~fD~V~~~~~l~~~~---~~-~~~~~-----------~~l~~~~~~L~~gG~li~~~ 206 (262)
.. ...+.+|+|+.+....... .. .++.. .+++.+...++++|.+++..
T Consensus 72 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 72 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 00 0114789999876543210 01 23222 24455666666677776653
No 429
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=82.22 E-value=6.2 Score=30.47 Aligned_cols=82 Identities=6% Similarity=-0.123 Sum_probs=49.8
Q ss_pred CCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
+.++|=.|++.| ++..+++ ....+|+.++.+++.++.+.+.+.. ....++.++.+|+.+........
T Consensus 2 ~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~~~~D~~~~~~v~~~~ 71 (235)
T 3l77_A 2 MKVAVITGASRG-IGEAIARALARDGYALALGARSVDRLEKIAHELMQ---------EQGVEVFYHHLDVSKAESVEEFS 71 (235)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---------HHCCCEEEEECCTTCHHHHHHHC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---------hcCCeEEEEEeccCCHHHHHHHH
Confidence 457888887665 5554443 2334799999998877666554421 11345888999987653211100
Q ss_pred C-----CCCeeEEEEccccc
Q 024797 162 D-----DAPFDICSCQFAMH 176 (262)
Q Consensus 162 ~-----~~~fD~V~~~~~l~ 176 (262)
. .+..|+++.+..+.
T Consensus 72 ~~~~~~~g~id~li~~Ag~~ 91 (235)
T 3l77_A 72 KKVLERFGDVDVVVANAGLG 91 (235)
T ss_dssp C-HHHHHSSCSEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCccc
Confidence 1 14789999887654
No 430
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=82.18 E-value=9.1 Score=30.66 Aligned_cols=79 Identities=14% Similarity=0.037 Sum_probs=50.1
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc--
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-- 158 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|.+++.++.+.+.+. .++.++.+|+.+.....
T Consensus 28 ~gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~~~v~~~ 93 (277)
T 3gvc_A 28 AGKVAIVTGAGAG-IGLAVARRLADEGCHVLCADIDGDAADAAATKIG-------------CGAAACRVDVSDEQQIIAM 93 (277)
T ss_dssp TTCEEEETTTTST-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC-------------SSCEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-------------CcceEEEecCCCHHHHHHH
Confidence 5678888888766 5444433 233479999999887776655442 24778899987653210
Q ss_pred ---ccCCCCCeeEEEEccccc
Q 024797 159 ---VLADDAPFDICSCQFAMH 176 (262)
Q Consensus 159 ---~~~~~~~fD~V~~~~~l~ 176 (262)
....-+..|+++.+....
T Consensus 94 ~~~~~~~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 94 VDACVAAFGGVDKLVANAGVV 114 (277)
T ss_dssp HHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 000125789999877553
No 431
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.23 E-value=17 Score=29.28 Aligned_cols=102 Identities=9% Similarity=-0.055 Sum_probs=51.6
Q ss_pred CeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCC
Q 024797 86 DVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (262)
Q Consensus 86 ~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (262)
.+|.=+|+|. |......+......|+++|.+++.++..++.... .. .... ......++.... +....-.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~--~~-----~~~~-~~~~~~~~~~~~--~~~~~~~ 73 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLI--AD-----FNGE-EVVANLPIFSPE--EIDHQNE 73 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEE--EE-----ETTE-EEEECCCEECGG--GCCTTSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEE--EE-----eCCC-eeEecceeecch--hhcccCC
Confidence 4788899975 3332222222233799999998877776654210 00 0000 000000000100 0000012
Q ss_pred CeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024797 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 165 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
..|+|+..- +......++..+...++++..++.
T Consensus 74 ~~d~vi~~v-------~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 74 QVDLIIALT-------KAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CCSEEEECS-------CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCCEEEEEe-------ccccHHHHHHHHHHhcCCCCEEEE
Confidence 689988644 234567788888888887765544
No 432
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=81.17 E-value=0.59 Score=39.91 Aligned_cols=42 Identities=19% Similarity=0.146 Sum_probs=30.1
Q ss_pred CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHH
Q 024797 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRT 125 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~ 125 (262)
++.+|+=+|+|. |.....+++.....|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 678999999985 444444444333379999999887777665
No 433
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=81.14 E-value=11 Score=30.12 Aligned_cols=111 Identities=14% Similarity=0.009 Sum_probs=60.9
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhH-HHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-c
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGS-IEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~-~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (262)
.+.++|-.|++.| ++..+++ ....+|++++.+... .+.+.+.+.. ...++.++.+|+.+.... .
T Consensus 28 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~ 96 (283)
T 1g0o_A 28 EGKVALVTGAGRG-IGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK----------NGSDAACVKANVGVVEDIVR 96 (283)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----------TTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHH----------hCCCeEEEEcCCCCHHHHHH
Confidence 4678888887765 5555443 233478888887643 3333333321 133478888998664311 0
Q ss_pred c----cCCCCCeeEEEEcccccccC----CCHHHHHH-----------HHHHHHhccCCCcEEEEE
Q 024797 159 V----LADDAPFDICSCQFAMHYSW----STEARARR-----------ALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ~----~~~~~~fD~V~~~~~l~~~~----~~~~~~~~-----------~l~~~~~~L~~gG~li~~ 205 (262)
. ...-+..|+++.+....... .+.++... +++.+...++.+|.++..
T Consensus 97 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 97 MFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 0 00125789999877543210 02333322 345566666677887764
No 434
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=81.12 E-value=5.3 Score=31.63 Aligned_cols=111 Identities=9% Similarity=-0.094 Sum_probs=62.8
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEE-eCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGI-DIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gv-D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 158 (262)
.+.++|-.|++.| ++..+++ ....+|+.+ +.+++..+.+.+.+.. ...++.++.+|+.+.....
T Consensus 7 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~ 75 (259)
T 3edm_A 7 TNRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK----------LGRSALAIKADLTNAAEVEA 75 (259)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHT----------TTSCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh----------cCCceEEEEcCCCCHHHHHH
Confidence 5678998898776 5444433 233367776 6677666665555442 1345788999987643210
Q ss_pred c----cCCCCCeeEEEEccccccc-----CCCHHHHH-----------HHHHHHHhccCCCcEEEEE
Q 024797 159 V----LADDAPFDICSCQFAMHYS-----WSTEARAR-----------RALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ~----~~~~~~fD~V~~~~~l~~~-----~~~~~~~~-----------~~l~~~~~~L~~gG~li~~ 205 (262)
. ...-+..|+++.+...... -.+.++.. .+.+.+...++++|.++..
T Consensus 76 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 76 AISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp HHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 0 0012578999987643211 01233322 3345566666667877654
No 435
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=81.08 E-value=1.5 Score=36.59 Aligned_cols=94 Identities=18% Similarity=0.138 Sum_probs=50.7
Q ss_pred hccCCCeEEEecCCC--CcchHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccc--
Q 024797 81 YARRGDVVLDLACGK--GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-- 155 (262)
Q Consensus 81 ~~~~~~~vLDiGcG~--G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-- 155 (262)
...++++||-.|++. |..+..+++.. ...|++++ +++-.+.++ .. . ..++..+ .++.
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~g---a-----------~~~~~~~-~~~~~~ 200 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DS---V-----------THLFDRN-ADYVQE 200 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GG---S-----------SEEEETT-SCHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cC---C-----------cEEEcCC-ccHHHH
Confidence 356889999999843 55555565543 45788888 555555554 21 0 1112211 1110
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.... ..+.+|+|+-.-.-. .+....+.|+++|++++.
T Consensus 201 ~~~~--~~~g~Dvv~d~~g~~-----------~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 201 VKRI--SAEGVDIVLDCLCGD-----------NTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp HHHH--CTTCEEEEEEECC------------------CTTEEEEEEEEEE
T ss_pred HHHh--cCCCceEEEECCCch-----------hHHHHHHHhhcCCEEEEE
Confidence 0111 235799998543221 125678999999998764
No 436
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=80.95 E-value=0.44 Score=40.65 Aligned_cols=42 Identities=21% Similarity=0.193 Sum_probs=31.0
Q ss_pred CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHH
Q 024797 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRT 125 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~ 125 (262)
++.+|+=+|+|. |......+.....+|+++|.++..++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 678999999985 544444444333379999999988888766
No 437
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=80.93 E-value=8.2 Score=31.07 Aligned_cols=104 Identities=14% Similarity=0.098 Sum_probs=55.1
Q ss_pred CeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCcccccccc-CCC--------CCeEEEeCcccccc
Q 024797 86 DVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRK-KFS--------FPARLICGDCYEVH 155 (262)
Q Consensus 86 ~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~-~~~--------~~v~~~~~d~~~~~ 155 (262)
.+|.=||+|. |.-+...+....-.|+++|.+++.++.+.+.+........... ... .++.. ..|..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~- 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA- 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH-
Confidence 4688888875 3222222222333799999999998888765321000000000 000 01111 2222111
Q ss_pred cccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEE
Q 024797 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (262)
Q Consensus 156 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li 203 (262)
-...|+|+..-. ++.+....++.++...++++..++
T Consensus 83 -------~~~aDlVi~av~-----~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 -------VKDADLVIEAVP-----ESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp -------TTTCSEEEECCC-----SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred -------hccCCEEEEecc-----CcHHHHHHHHHHHHhhCCCCcEEE
Confidence 135799885432 234567788899999998877654
No 438
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=80.58 E-value=19 Score=28.39 Aligned_cols=82 Identities=11% Similarity=-0.048 Sum_probs=50.8
Q ss_pred CeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 86 DVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 86 ~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.+||=.|| |.++..+++ .....|++++-++........ ..++++.+|+.++.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------------~~~~~~~~D~~d~~------- 60 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----------------SGAEPLLWPGEEPS------- 60 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----------------TTEEEEESSSSCCC-------
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----------------CCCeEEEecccccc-------
Confidence 57999995 666655544 233379999988865544332 13888999988744
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHh
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSA 194 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~ 194 (262)
-..+|+|+........ .......+++.+.+
T Consensus 61 ~~~~d~vi~~a~~~~~--~~~~~~~l~~a~~~ 90 (286)
T 3ius_A 61 LDGVTHLLISTAPDSG--GDPVLAALGDQIAA 90 (286)
T ss_dssp CTTCCEEEECCCCBTT--BCHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCcccc--ccHHHHHHHHHHHh
Confidence 2467999987765432 11223444454444
No 439
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=80.56 E-value=4.9 Score=32.06 Aligned_cols=84 Identities=11% Similarity=0.048 Sum_probs=50.0
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCC------------hhHHHHHHHHhccCccccccccCCCCCeEEEe
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIA------------EGSIEDCRTRYNGDADHHQRRKKFSFPARLIC 148 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~ 148 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|.+ ++.++...+.... ...++.++.
T Consensus 12 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 80 (278)
T 3sx2_A 12 TGKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED----------IGSRIVARQ 80 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH----------HTCCEEEEE
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHh----------cCCeEEEEe
Confidence 5678998887765 5444433 233479999987 4555544443321 134588899
Q ss_pred Cccccccccc-cc----CCCCCeeEEEEccccccc
Q 024797 149 GDCYEVHLDK-VL----ADDAPFDICSCQFAMHYS 178 (262)
Q Consensus 149 ~d~~~~~~~~-~~----~~~~~fD~V~~~~~l~~~ 178 (262)
+|+.+..... .. ..-+..|+++.+..+...
T Consensus 81 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 81 ADVRDRESLSAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 9987643210 00 012578999988766543
No 440
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.48 E-value=4.7 Score=31.94 Aligned_cols=81 Identities=11% Similarity=-0.027 Sum_probs=51.8
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-c
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-V 159 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~ 159 (262)
.+.+||-.|++.| ++..+++ ....+|+.++.+++.++...+.+... ..++.++.+|+.+..... .
T Consensus 28 ~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~ 96 (262)
T 3rkr_A 28 SGQVAVVTGASRG-IGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA----------GGEAESHACDLSHSDAIAAF 96 (262)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh----------CCceeEEEecCCCHHHHHHH
Confidence 5678998887765 5555443 23347999999988877766655421 335788899987643210 0
Q ss_pred ----cCCCCCeeEEEEcccc
Q 024797 160 ----LADDAPFDICSCQFAM 175 (262)
Q Consensus 160 ----~~~~~~fD~V~~~~~l 175 (262)
....+..|+++.+...
T Consensus 97 ~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 97 ATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHhcCCCCEEEECCCc
Confidence 0012578999987765
No 441
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=80.39 E-value=7.5 Score=30.65 Aligned_cols=78 Identities=13% Similarity=0.017 Sum_probs=49.5
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc---
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD--- 157 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 157 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|.+.+.++...+.+. .++.++.+|+.+....
T Consensus 7 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~v~~~ 72 (259)
T 4e6p_A 7 EGKSALITGSARG-IGRAFAEAYVREGATVAIADIDIERARQAAAEIG-------------PAAYAVQMDVTRQDSIDAA 72 (259)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-------------TTEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-------------CCceEEEeeCCCHHHHHHH
Confidence 4678898887765 5554433 233479999999887766655442 2477889998764321
Q ss_pred --cccCCCCCeeEEEEcccc
Q 024797 158 --KVLADDAPFDICSCQFAM 175 (262)
Q Consensus 158 --~~~~~~~~fD~V~~~~~l 175 (262)
.....-+..|+++.+...
T Consensus 73 ~~~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 73 IAATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHHHHHSSSCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCc
Confidence 000012578999988755
No 442
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=80.37 E-value=1.5 Score=35.70 Aligned_cols=45 Identities=18% Similarity=0.285 Sum_probs=30.3
Q ss_pred CCeeEEEEcccccccCCC-H------HHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 164 APFDICSCQFAMHYSWST-E------ARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~~~~-~------~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
+++|+|+++++-.+.--- . .....++..+.++|+|||.+++.+..
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvyg 256 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYG 256 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEec
Confidence 779999998743321001 1 12233567788999999999998854
No 443
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=80.14 E-value=11 Score=29.92 Aligned_cols=80 Identities=16% Similarity=-0.058 Sum_probs=48.4
Q ss_pred cCCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (262)
-.++++|--|.+.| .+...++ ....+|+.+|.+.. +.+.+.+.+ ...++.++++|+.+......
T Consensus 7 L~GKvalVTGas~G-IG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~----------~g~~~~~~~~Dv~d~~~v~~ 73 (247)
T 4hp8_A 7 LEGRKALVTGANTG-LGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAK----------DGGNASALLIDFADPLAAKD 73 (247)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHH----------TTCCEEEEECCTTSTTTTTT
T ss_pred CCCCEEEEeCcCCH-HHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHH----------hCCcEEEEEccCCCHHHHHH
Confidence 36788888888876 5444433 23347888888753 122222221 13457888999876543222
Q ss_pred cCCCCCeeEEEEcccc
Q 024797 160 LADDAPFDICSCQFAM 175 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~l 175 (262)
....+..|+++.+..+
T Consensus 74 ~~~~g~iDiLVNNAGi 89 (247)
T 4hp8_A 74 SFTDAGFDILVNNAGI 89 (247)
T ss_dssp SSTTTCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 2356789999987654
No 444
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=79.99 E-value=1.7 Score=36.17 Aligned_cols=109 Identities=11% Similarity=0.060 Sum_probs=61.2
Q ss_pred CCCeEEEecCCC-Ccc-hHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCC---------CCeEEEeCccc
Q 024797 84 RGDVVLDLACGK-GGD-LIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS---------FPARLICGDCY 152 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~-~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~---------~~v~~~~~d~~ 152 (262)
...+|--||+|+ |.- +..++..+. .|+.+|++++.++.+.+++...-....+..... .++.+ +.|+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~ 82 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchH
Confidence 346899999986 332 223333333 799999999998888766542100000000000 01111 11211
Q ss_pred ccccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeC
Q 024797 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (262)
Q Consensus 153 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~ 207 (262)
+ .-...|+|+ +-+.++.+-.+++++++-++++|+.+|.-++.
T Consensus 83 ~--------a~~~ad~Vi-----Eav~E~l~iK~~lf~~l~~~~~~~aIlaSNTS 124 (319)
T 3ado_A 83 E--------AVEGVVHIQ-----ECVPENLDLKRKIFAQLDSIVDDRVVLSSSSS 124 (319)
T ss_dssp H--------HTTTEEEEE-----ECCCSCHHHHHHHHHHHHTTCCSSSEEEECCS
T ss_pred h--------HhccCcEEe-----eccccHHHHHHHHHHHHHHHhhhcceeehhhh
Confidence 1 013467775 33344668889999999999999887766554
No 445
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=79.81 E-value=5.5 Score=26.70 Aligned_cols=69 Identities=9% Similarity=-0.173 Sum_probs=41.0
Q ss_pred CCeEEEecCCCCcchHHHHh----cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc-ccc
Q 024797 85 GDVVLDLACGKGGDLIKWDK----AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKV 159 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~----~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 159 (262)
..+|+=+|+| ..+..++. .+...|+++|.+++.++.... . .+.+...|+.+... ...
T Consensus 5 ~~~v~I~G~G--~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-~---------------~~~~~~~d~~~~~~~~~~ 66 (118)
T 3ic5_A 5 RWNICVVGAG--KIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-M---------------GVATKQVDAKDEAGLAKA 66 (118)
T ss_dssp CEEEEEECCS--HHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-T---------------TCEEEECCTTCHHHHHHH
T ss_pred cCeEEEECCC--HHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-C---------------CCcEEEecCCCHHHHHHH
Confidence 4589999984 34443322 332479999999877665541 1 25667777654321 111
Q ss_pred cCCCCCeeEEEEccc
Q 024797 160 LADDAPFDICSCQFA 174 (262)
Q Consensus 160 ~~~~~~fD~V~~~~~ 174 (262)
-..+|+|+....
T Consensus 67 ---~~~~d~vi~~~~ 78 (118)
T 3ic5_A 67 ---LGGFDAVISAAP 78 (118)
T ss_dssp ---TTTCSEEEECSC
T ss_pred ---HcCCCEEEECCC
Confidence 136899987653
No 446
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=79.49 E-value=14 Score=29.23 Aligned_cols=90 Identities=11% Similarity=0.077 Sum_probs=52.4
Q ss_pred CCeEEEecCCC-Ccch-HHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 85 GDVVLDLACGK-GGDL-IKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 85 ~~~vLDiGcG~-G~~~-~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
+.+|.=+|||. |... ..+...+...|+++|.+++.++...+... +.. ..+..+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g---------------~~~-~~~~~~~-------- 65 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE---------------AEY-TTDLAEV-------- 65 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT---------------CEE-ESCGGGS--------
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC---------------Cce-eCCHHHH--------
Confidence 35788999974 3322 22333444348899999988777665432 222 2232221
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
-...|+|+..- +......++..+...+++|.. ++++
T Consensus 66 ~~~~Dvvi~av-------~~~~~~~v~~~l~~~~~~~~i-vv~~ 101 (266)
T 3d1l_A 66 NPYAKLYIVSL-------KDSAFAELLQGIVEGKREEAL-MVHT 101 (266)
T ss_dssp CSCCSEEEECC-------CHHHHHHHHHHHHTTCCTTCE-EEEC
T ss_pred hcCCCEEEEec-------CHHHHHHHHHHHHhhcCCCcE-EEEC
Confidence 13579988643 234457777888777777654 4444
No 447
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=79.10 E-value=12 Score=34.35 Aligned_cols=131 Identities=12% Similarity=0.126 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHhccCCCeEEEecCCCCcchHHHHhc-C--------CCeEEEEeCChhHHHHHHHHhccCccccc----
Q 024797 69 LNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA-K--------IGYYVGIDIAEGSIEDCRTRYNGDADHHQ---- 135 (262)
Q Consensus 69 ~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~--------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~---- 135 (262)
+..++..++......+...|+-+|||-=.....+... . ...++=+|..+ .++.=++.+.+......
T Consensus 92 ~d~~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~-v~~~K~~~l~~~~~l~~~~~~ 170 (695)
T 2zwa_A 92 IRSRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSD-LLKIKIELIKTIPELSKIIGL 170 (695)
T ss_dssp HHHHHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHH-HHHHHHHHHHHCHHHHHHTTC
T ss_pred HHHHHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHH-HHHHHHHHHHcChHHHHhhcc
Confidence 3334444443321123568999999985544444332 1 22466677644 33333333331110000
Q ss_pred --cc---------cCCCCCeEEEeCccccccc-cc----ccC-CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCC
Q 024797 136 --RR---------KKFSFPARLICGDCYEVHL-DK----VLA-DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRP 198 (262)
Q Consensus 136 --~~---------~~~~~~v~~~~~d~~~~~~-~~----~~~-~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~ 198 (262)
.. .....+..++.+|+.+... .. ..+ ....--++++-+++.|+ +++...++|+.+.+. +
T Consensus 171 ~~~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl--~~~~~~~ll~~~~~~--~ 246 (695)
T 2zwa_A 171 SEDKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYM--KPERSDSIIEATSKM--E 246 (695)
T ss_dssp CSSCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGS--CHHHHHHHHHHHHTS--S
T ss_pred ccccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEc--CHHHHHHHHHHHhhC--C
Confidence 00 0001367889999987522 11 111 23445677788899999 888999999999864 5
Q ss_pred CcEEEE
Q 024797 199 GGTFIG 204 (262)
Q Consensus 199 gG~li~ 204 (262)
+|.+++
T Consensus 247 ~~~~~~ 252 (695)
T 2zwa_A 247 NSHFII 252 (695)
T ss_dssp SEEEEE
T ss_pred CceEEE
Confidence 665554
No 448
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=78.90 E-value=8.7 Score=31.49 Aligned_cols=83 Identities=14% Similarity=-0.019 Sum_probs=52.5
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-c-
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~- 158 (262)
.+.+||-.|++.| ++..+++ ....+|++++.++..++.+.+.+... ....++.++.+|+.+..-. .
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~--------~~~~~~~~~~~Dl~~~~~v~~~ 77 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE--------GSGPEVMGVQLDVASREGFKMA 77 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------TCGGGEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--------CCCCeEEEEECCCCCHHHHHHH
Confidence 4678999998866 5555443 23347999999998877766655411 1122588899998764311 0
Q ss_pred ---ccCCCCCeeEEEEcccc
Q 024797 159 ---VLADDAPFDICSCQFAM 175 (262)
Q Consensus 159 ---~~~~~~~fD~V~~~~~l 175 (262)
.....+..|+++.+..+
T Consensus 78 ~~~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 78 ADEVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHHHTCCEEEEEECCCC
T ss_pred HHHHHHhCCCCCEEEECCCc
Confidence 00012578999988764
No 449
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=78.43 E-value=3.3 Score=33.12 Aligned_cols=83 Identities=14% Similarity=0.085 Sum_probs=54.9
Q ss_pred cCCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc--
Q 024797 83 RRGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-- 157 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-- 157 (262)
-.++++|--|++.| .+..+++ ....+|+.+|.+++.++.+.+.+... ..++.++++|+.+....
T Consensus 7 L~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~----------g~~~~~~~~Dv~~~~~v~~ 75 (255)
T 4g81_D 7 LTGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK----------GYDAHGVAFDVTDELAIEA 75 (255)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT----------TCCEEECCCCTTCHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEeeCCCHHHHHH
Confidence 36788888888876 5544433 23448999999998888776665521 34578889998764321
Q ss_pred ---cccCCCCCeeEEEEccccc
Q 024797 158 ---KVLADDAPFDICSCQFAMH 176 (262)
Q Consensus 158 ---~~~~~~~~fD~V~~~~~l~ 176 (262)
.....-++.|+++.+..+.
T Consensus 76 ~~~~~~~~~G~iDiLVNNAG~~ 97 (255)
T 4g81_D 76 AFSKLDAEGIHVDILINNAGIQ 97 (255)
T ss_dssp HHHHHHHTTCCCCEEEECCCCC
T ss_pred HHHHHHHHCCCCcEEEECCCCC
Confidence 1111347899999876543
No 450
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=78.10 E-value=0.71 Score=39.69 Aligned_cols=42 Identities=12% Similarity=0.117 Sum_probs=31.6
Q ss_pred CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHH
Q 024797 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRT 125 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~ 125 (262)
++.+|+-+|+|. |.....++......|+++|.++..++.+.+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 578999999985 544555554444489999999988888776
No 451
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=77.88 E-value=14 Score=29.48 Aligned_cols=111 Identities=15% Similarity=0.026 Sum_probs=62.8
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCC-hhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-c
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIA-EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (262)
.+.++|-.|++.| ++..+++ ....+|+.++.. .+..+...+.+.. ...++.++.+|+.+.... .
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~----------~~~~~~~~~~Dv~d~~~v~~ 98 (271)
T 3v2g_A 30 AGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ----------AGGRAVAIRADNRDAEAIEQ 98 (271)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----------TTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh----------cCCcEEEEECCCCCHHHHHH
Confidence 5778999998775 5554433 233368777654 3444444443331 134578899998764321 0
Q ss_pred ----ccCCCCCeeEEEEcccccccC----CCHHHHH-----------HHHHHHHhccCCCcEEEEE
Q 024797 159 ----VLADDAPFDICSCQFAMHYSW----STEARAR-----------RALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ----~~~~~~~fD~V~~~~~l~~~~----~~~~~~~-----------~~l~~~~~~L~~gG~li~~ 205 (262)
.....+..|+++.+....... .+.++.. .+++.+...++++|.++..
T Consensus 99 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 99 AIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 000124789999876543211 1333332 3456667777888887765
No 452
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=77.61 E-value=10 Score=30.40 Aligned_cols=81 Identities=12% Similarity=0.107 Sum_probs=49.1
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCC----------------hhHHHHHHHHhccCccccccccCCCCCe
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIA----------------EGSIEDCRTRYNGDADHHQRRKKFSFPA 144 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s----------------~~~~~~a~~~~~~~~~~~~~~~~~~~~v 144 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|.+ ++.++...+.+.. ...++
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 78 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG----------HNRRI 78 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT----------TTCCE
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh----------cCCce
Confidence 5678999998876 4444433 233479999887 4555554444331 13458
Q ss_pred EEEeCccccccccc-c----cCCCCCeeEEEEcccc
Q 024797 145 RLICGDCYEVHLDK-V----LADDAPFDICSCQFAM 175 (262)
Q Consensus 145 ~~~~~d~~~~~~~~-~----~~~~~~fD~V~~~~~l 175 (262)
.++.+|+.+..... . ...-+..|+++.+..+
T Consensus 79 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 79 VTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 88999987643210 0 0012578999988754
No 453
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=77.31 E-value=22 Score=29.96 Aligned_cols=102 Identities=11% Similarity=-0.044 Sum_probs=62.9
Q ss_pred CCCeEEEecCCCCcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (262)
.+.+||.++.+.|.++..++.. .++.+.-|--.....+.++...+.. ...+.+... ... ..
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~-------~~~~~~~~~-~~~--------~~ 98 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGID-------ESSVKFLDS-TAD--------YP 98 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCC-------GGGSEEEET-TSC--------CC
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCC-------ccceEeccc-ccc--------cc
Confidence 4568999999999998877543 3344432443444444555421111 112444322 111 35
Q ss_pred CCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 164 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
..+|+|+.... .........|..+...|++|+.+++.-.+.
T Consensus 99 ~~~~~v~~~lp-----k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 99 QQPGVVLIKVP-----KTLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp SSCSEEEEECC-----SCHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred cCCCEEEEEcC-----CCHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 67999986443 355778889999999999999998765543
No 454
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=77.29 E-value=5.5 Score=31.19 Aligned_cols=81 Identities=19% Similarity=0.092 Sum_probs=51.7
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-c
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-V 159 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~ 159 (262)
.+.+||-.|++.| ++..+++ ....+|+.+|.+++.++...+.+... ..++.++.+|+.+..... .
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~ 76 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD----------GGTAISVAVDVSDPESAKAM 76 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCEEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHHHHH
Confidence 5678998898765 5544433 23347999999998887776655421 335788899987643210 0
Q ss_pred ----cCCCCCeeEEEEcccc
Q 024797 160 ----LADDAPFDICSCQFAM 175 (262)
Q Consensus 160 ----~~~~~~fD~V~~~~~l 175 (262)
....+..|+++.+..+
T Consensus 77 ~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 77 ADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCc
Confidence 0012478999987754
No 455
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=77.11 E-value=8.6 Score=31.12 Aligned_cols=81 Identities=11% Similarity=0.105 Sum_probs=48.8
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCC------------hhHHHHHHHHhccCccccccccCCCCCeEEEe
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIA------------EGSIEDCRTRYNGDADHHQRRKKFSFPARLIC 148 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~ 148 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|.+ ++.++.+.+.+.. ...++.++.
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 95 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA----------LGRRIIASQ 95 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH----------TTCCEEEEE
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh----------cCCceEEEE
Confidence 5678998898876 5554433 234479999987 4445544443331 134588899
Q ss_pred Cccccccccc-c----cCCCCCeeEEEEcccc
Q 024797 149 GDCYEVHLDK-V----LADDAPFDICSCQFAM 175 (262)
Q Consensus 149 ~d~~~~~~~~-~----~~~~~~fD~V~~~~~l 175 (262)
+|+.+..... . ...-+..|+++.+...
T Consensus 96 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 96 VDVRDFDAMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 9987643210 0 0012578999987654
No 456
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=77.00 E-value=9.1 Score=30.25 Aligned_cols=84 Identities=13% Similarity=0.052 Sum_probs=48.8
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-cc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KV 159 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 159 (262)
.+.+||-.|++.| ++..+++ ....+|++++.+++..+.+.+.+... ....++.++.+|+.+.... ..
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~~~~D~~~~~~v~~~ 76 (267)
T 2gdz_A 6 NGKVALVTGAAQG-IGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ--------FEPQKTLFIQCDVADQQQLRDT 76 (267)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--------SCGGGEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEECCCCc-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh--------cCCCceEEEecCCCCHHHHHHH
Confidence 3567888887665 5544433 23347999999887666554444310 0023477889998764311 00
Q ss_pred c----CCCCCeeEEEEccccc
Q 024797 160 L----ADDAPFDICSCQFAMH 176 (262)
Q Consensus 160 ~----~~~~~fD~V~~~~~l~ 176 (262)
. ..-+..|+++.+....
T Consensus 77 ~~~~~~~~g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 77 FRKVVDHFGRLDILVNNAGVN 97 (267)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 0 0114689999877643
No 457
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=76.73 E-value=12 Score=29.51 Aligned_cols=81 Identities=14% Similarity=0.040 Sum_probs=48.3
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
.+.+||=.|++.| ++..+++ .....|++++.++..++...+.+.. ...++.++.+|+.+.......
T Consensus 13 ~~k~vlITGasgg-iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~ 81 (266)
T 1xq1_A 13 KAKTVLVTGGTKG-IGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK----------KGFQVTGSVCDASLRPEREKL 81 (266)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------TTCCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------cCCeeEEEECCCCCHHHHHHH
Confidence 4567888887654 5554443 2334799999988766655544431 123478888998764311000
Q ss_pred CC------CCCeeEEEEcccc
Q 024797 161 AD------DAPFDICSCQFAM 175 (262)
Q Consensus 161 ~~------~~~fD~V~~~~~l 175 (262)
.. .+..|+|+.+...
T Consensus 82 ~~~~~~~~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 82 MQTVSSMFGGKLDILINNLGA 102 (266)
T ss_dssp HHHHHHHHTTCCSEEEEECCC
T ss_pred HHHHHHHhCCCCcEEEECCCC
Confidence 01 1578999987654
No 458
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=76.68 E-value=12 Score=30.06 Aligned_cols=88 Identities=17% Similarity=0.214 Sum_probs=51.5
Q ss_pred CeEEEecC-CC-CcchH-HHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 86 DVVLDLAC-GK-GGDLI-KWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 86 ~~vLDiGc-G~-G~~~~-~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.+|.=||+ |. |.... .+...+ ..|+++|.+++.++.+.+ .. +.. .+..+.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~-~g---------------~~~--~~~~~~-------- 64 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSA-HHLAAIEIAPEGRDRLQG-MG---------------IPL--TDGDGW-------- 64 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSS-SEEEEECCSHHHHHHHHH-TT---------------CCC--CCSSGG--------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHh-cC---------------CCc--CCHHHH--------
Confidence 47899999 75 43333 233333 379999999887766654 11 111 121111
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
-...|+|+..- +......++.++...++++. +++++..
T Consensus 65 ~~~aDvVi~av-------~~~~~~~v~~~l~~~l~~~~-ivv~~s~ 102 (286)
T 3c24_A 65 IDEADVVVLAL-------PDNIIEKVAEDIVPRVRPGT-IVLILDA 102 (286)
T ss_dssp GGTCSEEEECS-------CHHHHHHHHHHHGGGSCTTC-EEEESCS
T ss_pred hcCCCEEEEcC-------CchHHHHHHHHHHHhCCCCC-EEEECCC
Confidence 13579998643 33446778888888887765 4554444
No 459
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=76.62 E-value=25 Score=27.54 Aligned_cols=82 Identities=7% Similarity=-0.183 Sum_probs=44.3
Q ss_pred CCCeEEEecCCC-CcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc--
Q 024797 84 RGDVVLDLACGK-GGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-- 157 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-- 157 (262)
.+.+||-.|++. |.++..+++ ....+|+.+|.++...+.+.+.... ...+.++.+|+.+....
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~-----------~~~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ-----------LGSDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH-----------TTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHh-----------cCCcEEEEccCCCHHHHHH
Confidence 456889888762 445555443 2334799998876322222221110 01246778888764311
Q ss_pred ---cccCCCCCeeEEEEccccc
Q 024797 158 ---KVLADDAPFDICSCQFAMH 176 (262)
Q Consensus 158 ---~~~~~~~~fD~V~~~~~l~ 176 (262)
.....-+..|+++.+....
T Consensus 77 ~~~~~~~~~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSIGFA 98 (265)
T ss_dssp HHHHHHTTCSSEEEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 1111235799999887653
No 460
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=76.31 E-value=9.1 Score=34.18 Aligned_cols=98 Identities=9% Similarity=0.015 Sum_probs=58.3
Q ss_pred CCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
..+|+=+|+|. .+..+++ .....|+.+|.+++.++.+++... +.++.+|+.+.......
T Consensus 127 ~~hviI~G~g~--~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~---------------~~~i~Gd~~~~~~L~~a- 188 (565)
T 4gx0_A 127 RGHILIFGIDP--ITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEG---------------FKVVYGSPTDAHVLAGL- 188 (565)
T ss_dssp CSCEEEESCCH--HHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCS---------------SEEEESCTTCHHHHHHT-
T ss_pred CCeEEEECCCh--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC---------------CeEEEeCCCCHHHHHhc-
Confidence 45788888764 4444443 334469999999998888775422 77899998765432111
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCCh
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 209 (262)
.-..+|.|++. .. +.. ........+.+. ...++....+.
T Consensus 189 ~i~~a~~vi~t--~~----D~~--n~~~~~~ar~~~-~~~iiar~~~~ 227 (565)
T 4gx0_A 189 RVAAARSIIAN--LS----DPD--NANLCLTVRSLC-QTPIIAVVKEP 227 (565)
T ss_dssp TGGGCSEEEEC--SC----HHH--HHHHHHHHHTTC-CCCEEEECSSG
T ss_pred CcccCCEEEEe--CC----cHH--HHHHHHHHHHhc-CceEEEEECCH
Confidence 23567888762 21 122 223333455566 66666665443
No 461
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=75.94 E-value=5.2 Score=34.62 Aligned_cols=41 Identities=17% Similarity=-0.009 Sum_probs=28.9
Q ss_pred CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHH
Q 024797 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCR 124 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~ 124 (262)
.+.+|+-+|+|. |......++....+|+++|.++.....+.
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~ 260 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC 260 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH
Confidence 688999999997 55555555544448999999986544443
No 462
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=75.89 E-value=11 Score=29.75 Aligned_cols=109 Identities=13% Similarity=0.077 Sum_probs=60.3
Q ss_pred CCCeEEEecC-CCCcchHHHHh---cCCCeEEEEeCChhH-HHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-
Q 024797 84 RGDVVLDLAC-GKGGDLIKWDK---AKIGYYVGIDIAEGS-IEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD- 157 (262)
Q Consensus 84 ~~~~vLDiGc-G~G~~~~~l~~---~~~~~v~gvD~s~~~-~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 157 (262)
.+.++|-.|+ |+|.++..+++ ....+|+.+|.++.. ++...+.. ..++.++.+|+.+....
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~ 72 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-------------PAKAPLLELDVQNEEHLA 72 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-------------SSCCCEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-------------CCCceEEEccCCCHHHHH
Confidence 4678999998 35556665543 233479999987643 23332221 23477888998764311
Q ss_pred ccc----CCCC---CeeEEEEcccccc--------c-CCCHHHHHH-----------HHHHHHhccCCCcEEEEE
Q 024797 158 KVL----ADDA---PFDICSCQFAMHY--------S-WSTEARARR-----------ALANVSALLRPGGTFIGT 205 (262)
Q Consensus 158 ~~~----~~~~---~fD~V~~~~~l~~--------~-~~~~~~~~~-----------~l~~~~~~L~~gG~li~~ 205 (262)
... ..-+ ..|+++.+..... + -.+.++... +.+.+...++++|.++..
T Consensus 73 ~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 147 (269)
T 2h7i_A 73 SLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGM 147 (269)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEE
Confidence 000 0113 7999998775432 0 013333332 344555666667887654
No 463
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=75.62 E-value=16 Score=28.37 Aligned_cols=81 Identities=17% Similarity=0.180 Sum_probs=51.5
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc---
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD--- 157 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 157 (262)
.+.++|=.|++.| ++..+++ ....+|++++.++..++...+.+... ..++.++.+|+.+....
T Consensus 4 ~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~ 72 (247)
T 3lyl_A 4 NEKVALVTGASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMKEK----------GFKARGLVLNISDIESIQNF 72 (247)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEEecCCCHHHHHHH
Confidence 4567888887765 5544433 23347999999988877766655421 34588899998764321
Q ss_pred --cccCCCCCeeEEEEcccc
Q 024797 158 --KVLADDAPFDICSCQFAM 175 (262)
Q Consensus 158 --~~~~~~~~fD~V~~~~~l 175 (262)
......+..|+++.+...
T Consensus 73 ~~~~~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 73 FAEIKAENLAIDILVNNAGI 92 (247)
T ss_dssp HHHHHHTTCCCSEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 111123578999987654
No 464
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=75.18 E-value=9.3 Score=30.62 Aligned_cols=81 Identities=10% Similarity=0.026 Sum_probs=48.5
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeC-ChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDI-AEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 158 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|. +++.++...+.+.. ...++.++.+|+.+.....
T Consensus 28 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~d~~~v~~ 96 (280)
T 4da9_A 28 ARPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG----------LGARVIFLRADLADLSSHQA 96 (280)
T ss_dssp CCCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH----------TTCCEEEEECCTTSGGGHHH
T ss_pred CCCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh----------cCCcEEEEEecCCCHHHHHH
Confidence 4678888888765 5544433 23347888885 66655555544431 1345889999987754210
Q ss_pred cc----CCCCCeeEEEEcccc
Q 024797 159 VL----ADDAPFDICSCQFAM 175 (262)
Q Consensus 159 ~~----~~~~~fD~V~~~~~l 175 (262)
.. ..-+..|+++.+..+
T Consensus 97 ~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 97 TVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHHHHHSCCCEEEEECC-
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 00 012478999987765
No 465
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=75.15 E-value=13 Score=29.69 Aligned_cols=88 Identities=13% Similarity=0.044 Sum_probs=50.5
Q ss_pred CeEEEecCCC-Ccc-hHHHHhcC-CCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 86 DVVLDLACGK-GGD-LIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 86 ~~vLDiGcG~-G~~-~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.+|.=||+|. |.. +..+...+ ...|+++|.+++.++.+.+.-. ......|..+.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~---------------~~~~~~~~~~~-------- 63 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI---------------VDEATADFKVF-------- 63 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS---------------CSEEESCTTTT--------
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC---------------cccccCCHHHh--------
Confidence 4788899886 332 22333333 3479999999887776654210 10112232211
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhc-cCCCcEEE
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSAL-LRPGGTFI 203 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~-L~~gG~li 203 (262)
-...|+|++.- +......++.++... ++++..++
T Consensus 64 ~~~aDvVilav-------p~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 64 AALADVIILAV-------PIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp GGGCSEEEECS-------CHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred hcCCCEEEEcC-------CHHHHHHHHHHHHhcCCCCCCEEE
Confidence 13468888644 334457788888887 88765544
No 466
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=74.68 E-value=13 Score=29.46 Aligned_cols=112 Identities=12% Similarity=-0.024 Sum_probs=62.0
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChh---HHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEG---SIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (262)
.+.++|-.|++.| ++..+++ ....+|+.++.+.. .++...+.+.. ...++.++.+|+.+....
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~d~~~v 78 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED----------QGAKVALYQSDLSNEEEV 78 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT----------TTCEEEEEECCCCSHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh----------cCCcEEEEECCCCCHHHH
Confidence 5678998888766 5555544 23336888876543 33333333331 134588899998764321
Q ss_pred c-c----cCCCCCeeEEEEcccccccC----CCHHHHH-----------HHHHHHHhccCCCcEEEEEe
Q 024797 158 K-V----LADDAPFDICSCQFAMHYSW----STEARAR-----------RALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 158 ~-~----~~~~~~fD~V~~~~~l~~~~----~~~~~~~-----------~~l~~~~~~L~~gG~li~~~ 206 (262)
. . ...-+..|+++.+....... .+.++.. .+.+.+...++++|.++...
T Consensus 79 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 79 AKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 0 0 00125799999877543210 1333332 23445556666778877653
No 467
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=74.54 E-value=28 Score=27.47 Aligned_cols=83 Identities=14% Similarity=0.083 Sum_probs=49.0
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-cc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KV 159 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 159 (262)
.+.+||-.|++.| ++..+++ ....+|++++.++..++...+.+... .....+.++.+|+.+.... ..
T Consensus 31 ~~k~vlVTGasgg-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~~~~Dl~~~~~v~~~ 101 (279)
T 1xg5_A 31 RDRLALVTGASGG-IGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA--------GYPGTLIPYRCDLSNEEDILSM 101 (279)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--------TCSSEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhc--------CCCceEEEEEecCCCHHHHHHH
Confidence 4678888887654 5554443 23347999999887766655444311 1123477888998764311 00
Q ss_pred c----CCCCCeeEEEEcccc
Q 024797 160 L----ADDAPFDICSCQFAM 175 (262)
Q Consensus 160 ~----~~~~~fD~V~~~~~l 175 (262)
. ...+.+|+|+.+...
T Consensus 102 ~~~~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 102 FSAIRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHhCCCCCEEEECCCC
Confidence 0 011468999987654
No 468
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=74.53 E-value=7.3 Score=30.99 Aligned_cols=81 Identities=7% Similarity=-0.045 Sum_probs=46.8
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-cc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KV 159 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 159 (262)
.+.+||-.|++.| ++..+++ ....+|++++.++...+...+.... ...++.++.+|+.+.... ..
T Consensus 33 ~~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~~~~~~ 101 (279)
T 3ctm_A 33 KGKVASVTGSSGG-IGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT----------YGVHSKAYKCNISDPKSVEET 101 (279)
T ss_dssp TTCEEEETTTTSS-HHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHH----------HCSCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------cCCcceEEEeecCCHHHHHHH
Confidence 4678888887655 5554433 2233789998877655544433321 123478889998764311 00
Q ss_pred c----CCCCCeeEEEEcccc
Q 024797 160 L----ADDAPFDICSCQFAM 175 (262)
Q Consensus 160 ~----~~~~~fD~V~~~~~l 175 (262)
. ...+.+|+|+.+...
T Consensus 102 ~~~~~~~~g~id~li~~Ag~ 121 (279)
T 3ctm_A 102 ISQQEKDFGTIDVFVANAGV 121 (279)
T ss_dssp HHHHHHHHSCCSEEEECGGG
T ss_pred HHHHHHHhCCCCEEEECCcc
Confidence 0 011468999987654
No 469
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=74.34 E-value=14 Score=30.02 Aligned_cols=88 Identities=14% Similarity=0.072 Sum_probs=49.4
Q ss_pred CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEe-CcccccccccccC
Q 024797 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC-GDCYEVHLDKVLA 161 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~~ 161 (262)
.+.+|+=+|+|. |......+.....+|+++|.+++..+.+.+ .. +.... .++.+.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g---------------~~~~~~~~l~~~------- 212 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-MG---------------LVPFHTDELKEH------- 212 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT---------------CEEEEGGGHHHH-------
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CC---------------CeEEchhhHHHH-------
Confidence 678999999975 433333333333389999999865544332 11 22221 121111
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
-...|+|+.....+.+ +. ...+.+++|+.++-.
T Consensus 213 -l~~aDvVi~~~p~~~i--~~--------~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 213 -VKDIDICINTIPSMIL--NQ--------TVLSSMTPKTLILDL 245 (300)
T ss_dssp -STTCSEEEECCSSCCB--CH--------HHHTTSCTTCEEEEC
T ss_pred -hhCCCEEEECCChhhh--CH--------HHHHhCCCCCEEEEE
Confidence 2457999887665433 21 234678888876544
No 470
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=74.17 E-value=8 Score=30.77 Aligned_cols=111 Identities=13% Similarity=0.015 Sum_probs=62.0
Q ss_pred CCCeEEEecCCCCcchHHHHh----cCCCeEEEE-eCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK----AKIGYYVGI-DIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~----~~~~~v~gv-D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (262)
.+.++|-.|++.| ++..+++ .+. +|+.+ ..++...+...+.+.. ...++.++.+|+.+.....
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~~v~ 93 (267)
T 3u5t_A 26 TNKVAIVTGASRG-IGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEA----------AGGKALTAQADVSDPAAVR 93 (267)
T ss_dssp -CCEEEEESCSSH-HHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHH----------TTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHh----------cCCeEEEEEcCCCCHHHHH
Confidence 5778998888776 5444433 343 66665 4455555555444431 1345788899987643210
Q ss_pred -c----cCCCCCeeEEEEcccccccC----CCHHHHH-----------HHHHHHHhccCCCcEEEEEe
Q 024797 159 -V----LADDAPFDICSCQFAMHYSW----STEARAR-----------RALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 159 -~----~~~~~~fD~V~~~~~l~~~~----~~~~~~~-----------~~l~~~~~~L~~gG~li~~~ 206 (262)
. ....+..|+++.+..+.... .+.++.. .+++.+...++++|.++...
T Consensus 94 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 94 RLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 0 00125799999877543210 1223222 34556666777788877654
No 471
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=73.84 E-value=8.5 Score=30.36 Aligned_cols=81 Identities=14% Similarity=0.032 Sum_probs=46.9
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeC-ChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-c
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDI-AEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (262)
.+.+||=.|++.| ++..+++ ....+|++++. ++..++...+.+.. ...++.++.+|+.+.... .
T Consensus 20 ~~k~vlItGasgg-iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~----------~~~~~~~~~~D~~~~~~~~~ 88 (274)
T 1ja9_A 20 AGKVALTTGAGRG-IGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK----------LGAQGVAIQADISKPSEVVA 88 (274)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----------TTCCEEEEECCTTSHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh----------cCCcEEEEEecCCCHHHHHH
Confidence 4568888887543 5555443 23347888888 66665554444331 133578889998764321 1
Q ss_pred cc----CCCCCeeEEEEcccc
Q 024797 159 VL----ADDAPFDICSCQFAM 175 (262)
Q Consensus 159 ~~----~~~~~fD~V~~~~~l 175 (262)
.. ..-+.+|+|+.+...
T Consensus 89 ~~~~~~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 89 LFDKAVSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHHHHHHSCEEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 00 011478999977654
No 472
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=73.75 E-value=15 Score=29.32 Aligned_cols=82 Identities=11% Similarity=0.070 Sum_probs=50.0
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeC-------------ChhHHHHHHHHhccCccccccccCCCCCeEEE
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDI-------------AEGSIEDCRTRYNGDADHHQRRKKFSFPARLI 147 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~-------------s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~ 147 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|. +++.++...+.+.. ...++.++
T Consensus 14 ~gk~~lVTGas~g-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 82 (280)
T 3pgx_A 14 QGRVAFITGAARG-QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED----------QGRKALTR 82 (280)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT----------TTCCEEEE
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----------cCCeEEEE
Confidence 5678898888876 5554433 23347999987 56666655554432 13458888
Q ss_pred eCccccccccc-c----cCCCCCeeEEEEccccc
Q 024797 148 CGDCYEVHLDK-V----LADDAPFDICSCQFAMH 176 (262)
Q Consensus 148 ~~d~~~~~~~~-~----~~~~~~fD~V~~~~~l~ 176 (262)
++|+.+..... . ...-+..|+++.+....
T Consensus 83 ~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 83 VLDVRDDAALRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 99987643210 0 00125789999876553
No 473
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=73.53 E-value=17 Score=28.90 Aligned_cols=85 Identities=9% Similarity=-0.044 Sum_probs=47.6
Q ss_pred eEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCCC
Q 024797 87 VVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAP 165 (262)
Q Consensus 87 ~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 165 (262)
+|.=+|+|. |......+.. ...|+++|.+++.++...+.- +.... ..+. -..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g----------------~~~~~--~~~~--------~~~ 55 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEF----------------GSEAV--PLER--------VAE 55 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHH----------------CCEEC--CGGG--------GGG
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCC----------------CcccC--HHHH--------HhC
Confidence 577788886 4332222223 336999999988776665431 11111 1111 134
Q ss_pred eeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024797 166 FDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (262)
Q Consensus 166 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~ 204 (262)
.|+|+..-.- ......++..+...+++|..++.
T Consensus 56 ~D~vi~~v~~------~~~~~~v~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 56 ARVIFTCLPT------TREVYEVAEALYPYLREGTYWVD 88 (289)
T ss_dssp CSEEEECCSS------HHHHHHHHHHHTTTCCTTEEEEE
T ss_pred CCEEEEeCCC------hHHHHHHHHHHHhhCCCCCEEEE
Confidence 6888764322 23355677777778887765553
No 474
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=73.51 E-value=13 Score=29.66 Aligned_cols=82 Identities=13% Similarity=0.095 Sum_probs=48.9
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeC-------------ChhHHHHHHHHhccCccccccccCCCCCeEEE
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDI-------------AEGSIEDCRTRYNGDADHHQRRKKFSFPARLI 147 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~-------------s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~ 147 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|. +.+.++...+.... ...++.++
T Consensus 10 ~~k~~lVTGas~G-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 78 (277)
T 3tsc_A 10 EGRVAFITGAARG-QGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA----------ANRRIVAA 78 (277)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH----------TTCCEEEE
T ss_pred CCCEEEEECCccH-HHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----------cCCeEEEE
Confidence 5678998888776 4444433 23347999988 45555554444331 13458888
Q ss_pred eCccccccccc-cc----CCCCCeeEEEEccccc
Q 024797 148 CGDCYEVHLDK-VL----ADDAPFDICSCQFAMH 176 (262)
Q Consensus 148 ~~d~~~~~~~~-~~----~~~~~fD~V~~~~~l~ 176 (262)
.+|+.+..... .. ..-+..|+++.+..+.
T Consensus 79 ~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 79 VVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 99987643210 00 0125789999877543
No 475
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=73.01 E-value=10 Score=30.11 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=54.5
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc--
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-- 158 (262)
+++.+|--|++.| .+..+++ ....+|+.+|.+++.++.+.+.+... +.++.++++|+.+...-.
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~----------g~~~~~~~~Dvt~~~~v~~~ 74 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM----------GKEVLGVKADVSKKKDVEEF 74 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHHHHH
Confidence 5788898898877 5544433 23447999999999888877766532 345888999987643210
Q ss_pred ---ccCCCCCeeEEEEcccc
Q 024797 159 ---VLADDAPFDICSCQFAM 175 (262)
Q Consensus 159 ---~~~~~~~fD~V~~~~~l 175 (262)
....-++.|+++.+..+
T Consensus 75 ~~~~~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 75 VRRTFETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCcc
Confidence 01123789999987653
No 476
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=72.58 E-value=8.6 Score=31.16 Aligned_cols=41 Identities=15% Similarity=-0.037 Sum_probs=26.9
Q ss_pred CCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHH
Q 024797 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCR 124 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~ 124 (262)
.+.+|+=+|+|. |......+.....+|+++|.++...+.+.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~ 195 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA 195 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 678999999875 43333333333338999999986655443
No 477
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=72.40 E-value=9.9 Score=30.31 Aligned_cols=82 Identities=9% Similarity=0.001 Sum_probs=52.1
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc---
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD--- 157 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 157 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|.+++.++...+.+.. ...++.++.+|+.+....
T Consensus 25 ~gk~~lVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dv~d~~~v~~~ 93 (271)
T 4ibo_A 25 GGRTALVTGSSRG-LGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRN----------VGHDAEAVAFDVTSESEIIEA 93 (271)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH----------TTCCEEECCCCTTCHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------cCCceEEEEcCCCCHHHHHHH
Confidence 5778888887765 5554433 2334799999998877776665542 134588889998764321
Q ss_pred --cccCCCCCeeEEEEccccc
Q 024797 158 --KVLADDAPFDICSCQFAMH 176 (262)
Q Consensus 158 --~~~~~~~~fD~V~~~~~l~ 176 (262)
......+..|+++.+..+.
T Consensus 94 ~~~~~~~~g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 94 FARLDEQGIDVDILVNNAGIQ 114 (271)
T ss_dssp HHHHHHHTCCCCEEEECCCCC
T ss_pred HHHHHHHCCCCCEEEECCCCC
Confidence 0000135789999887653
No 478
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=71.78 E-value=24 Score=30.69 Aligned_cols=104 Identities=14% Similarity=0.170 Sum_probs=56.8
Q ss_pred CeEEEecCCC-CcchH-HHHhcCCCeEEEEeCChhHHHHHHHHhccC-------ccccccccCCCCCeEEEeCccccccc
Q 024797 86 DVVLDLACGK-GGDLI-KWDKAKIGYYVGIDIAEGSIEDCRTRYNGD-------ADHHQRRKKFSFPARLICGDCYEVHL 156 (262)
Q Consensus 86 ~~vLDiGcG~-G~~~~-~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~~~~~~~~~~~~v~~~~~d~~~~~~ 156 (262)
.+|.-||+|. |.-+. .++..+ -.|+++|.+++.++.+++..... +.... .........+ ..|...
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G-~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~-~~~~~~~~~i-~~~~~~--- 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVG-ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNG-QASAKPKLRF-SSSTKE--- 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCEEE-ESCGGG---
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCH-HHHHHHHhhh-cCCHHH---
Confidence 5799999986 43332 333333 37999999999888876533210 00000 0000011122 333311
Q ss_pred ccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEe
Q 024797 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (262)
Q Consensus 157 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~ 206 (262)
-...|+|+..-. . +..-...++.++...++++..++.++
T Consensus 112 ------~~~aDlVIeaVp-e----~~~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 112 ------LSTVDLVVEAVF-E----DMNLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp ------GTTCSEEEECCC-S----CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ------HCCCCEEEEcCC-C----CHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 135698886442 2 33445778889999998887666433
No 479
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=71.51 E-value=15 Score=29.07 Aligned_cols=82 Identities=17% Similarity=0.115 Sum_probs=50.4
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-cc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KV 159 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 159 (262)
.+.+||=.|++.| ++..+++ .....|+++|.++..++...+.+.. ...++.++.+|+.+.... ..
T Consensus 30 ~~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dl~~~~~v~~~ 98 (272)
T 1yb1_A 30 TGEIVLITGAGHG-IGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG----------LGAKVHTFVVDCSNREDIYSS 98 (272)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------TTCCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh----------cCCeEEEEEeeCCCHHHHHHH
Confidence 4678888887654 5555443 2334799999998777665554431 123588899998764311 00
Q ss_pred ----cCCCCCeeEEEEccccc
Q 024797 160 ----LADDAPFDICSCQFAMH 176 (262)
Q Consensus 160 ----~~~~~~fD~V~~~~~l~ 176 (262)
....+.+|+|+.+....
T Consensus 99 ~~~~~~~~g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 99 AKKVKAEIGDVSILVNNAGVV 119 (272)
T ss_dssp HHHHHHHTCCCSEEEECCCCC
T ss_pred HHHHHHHCCCCcEEEECCCcC
Confidence 00124789999877543
No 480
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=71.33 E-value=14 Score=29.75 Aligned_cols=81 Identities=14% Similarity=0.054 Sum_probs=49.5
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-c-
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K- 158 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~- 158 (262)
.+.+||-.|++.| ++..+++ ....+|+.+|.+++.++...+.+... ..++.++.+|+.+.... .
T Consensus 33 ~~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dv~d~~~v~~~ 101 (291)
T 3cxt_A 33 KGKIALVTGASYG-IGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA----------GINAHGYVCDVTDEDGIQAM 101 (291)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----------TCCCEEEECCTTCHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEEecCCCHHHHHHH
Confidence 4678888887765 5554443 23347999999887766655444311 23477888998764311 0
Q ss_pred ---ccCCCCCeeEEEEcccc
Q 024797 159 ---VLADDAPFDICSCQFAM 175 (262)
Q Consensus 159 ---~~~~~~~fD~V~~~~~l 175 (262)
....-+..|+++.+...
T Consensus 102 ~~~~~~~~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 102 VAQIESEVGIIDILVNNAGI 121 (291)
T ss_dssp HHHHHHHTCCCCEEEECCCC
T ss_pred HHHHHHHcCCCcEEEECCCc
Confidence 00012568999987754
No 481
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=71.31 E-value=19 Score=28.46 Aligned_cols=85 Identities=9% Similarity=-0.057 Sum_probs=48.2
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-cc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KV 159 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 159 (262)
.+.+||-.|++.| ++..+++ ....+|+.++.+++.++...+.+... .....++.++.+|+.+.... ..
T Consensus 5 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~ 76 (278)
T 1spx_A 5 AEKVAIITGSSNG-IGRATAVLFAREGAKVTITGRHAERLEETRQQILAA-------GVSEQNVNSVVADVTTDAGQDEI 76 (278)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------TCCGGGEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------ccCCCceeEEecccCCHHHHHHH
Confidence 3567888887754 5554433 23347999999987776655544100 00123478888998764311 00
Q ss_pred c----CCCCCeeEEEEccccc
Q 024797 160 L----ADDAPFDICSCQFAMH 176 (262)
Q Consensus 160 ~----~~~~~fD~V~~~~~l~ 176 (262)
. ..-+..|+++.+....
T Consensus 77 ~~~~~~~~g~id~lv~~Ag~~ 97 (278)
T 1spx_A 77 LSTTLGKFGKLDILVNNAGAA 97 (278)
T ss_dssp HHHHHHHHSCCCEEEECCC--
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 0 0114789999877543
No 482
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=71.28 E-value=21 Score=28.25 Aligned_cols=111 Identities=11% Similarity=-0.011 Sum_probs=58.6
Q ss_pred CCCeEEEecCC-CCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-c
Q 024797 84 RGDVVLDLACG-KGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (262)
Q Consensus 84 ~~~~vLDiGcG-~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (262)
.+.+||-.|++ +|.++..+++ ....+|+.++.++...+...+.... ...+.++.+|+.+.... .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~-----------~~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE-----------LNSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH-----------TTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------cCCcEEEEcCCCCHHHHHH
Confidence 45788989986 2335555543 2334799999887522222221110 01267788898764311 0
Q ss_pred ----ccCCCCCeeEEEEccccccc--------CCCHHHHHH-----------HHHHHHhccCCCcEEEEE
Q 024797 159 ----VLADDAPFDICSCQFAMHYS--------WSTEARARR-----------ALANVSALLRPGGTFIGT 205 (262)
Q Consensus 159 ----~~~~~~~fD~V~~~~~l~~~--------~~~~~~~~~-----------~l~~~~~~L~~gG~li~~ 205 (262)
.....+..|+++.+...... -.+.++... +++.+...++++|.++..
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 143 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTL 143 (275)
T ss_dssp HHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEE
Confidence 00012578999988754321 113333332 334555566557877654
No 483
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=71.19 E-value=12 Score=29.16 Aligned_cols=80 Identities=9% Similarity=0.026 Sum_probs=50.5
Q ss_pred cCCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccc-cc
Q 024797 83 RRGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DK 158 (262)
Q Consensus 83 ~~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 158 (262)
.++.+||-.|++.| ++..+++ ....+|+.++.+++.++...+.+. .++.+..+|+.+... ..
T Consensus 12 ~~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~~~ 77 (249)
T 3f9i_A 12 LTGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-------------DNYTIEVCNLANKEECSN 77 (249)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-------------SSEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-------------cCccEEEcCCCCHHHHHH
Confidence 46778998888765 5544433 233479999999887777665543 247788888866432 11
Q ss_pred ccCCCCCeeEEEEccccc
Q 024797 159 VLADDAPFDICSCQFAMH 176 (262)
Q Consensus 159 ~~~~~~~fD~V~~~~~l~ 176 (262)
.....+..|+++.+....
T Consensus 78 ~~~~~~~id~li~~Ag~~ 95 (249)
T 3f9i_A 78 LISKTSNLDILVCNAGIT 95 (249)
T ss_dssp HHHTCSCCSEEEECCC--
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 111235789999877543
No 484
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=70.85 E-value=19 Score=29.13 Aligned_cols=90 Identities=18% Similarity=0.119 Sum_probs=50.5
Q ss_pred CCeEEEecCCC-Ccch-HHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCC
Q 024797 85 GDVVLDLACGK-GGDL-IKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 85 ~~~vLDiGcG~-G~~~-~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (262)
..+|.=||+|. |... ..+++.+ -.|+++|.+++.++...+.- +.....+..+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~dr~~~~~~~~~~~g----------------~~~~~~~~~e~-------- 61 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG-LSTWGADLNPQACANLLAEG----------------ACGAAASAREF-------- 61 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHTT----------------CSEEESSSTTT--------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHcC----------------CccccCCHHHH--------
Confidence 35788898875 3322 2233333 37999999998877765431 11112333221
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHH---HHHHhccCCCcEEEEE
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRAL---ANVSALLRPGGTFIGT 205 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l---~~~~~~L~~gG~li~~ 205 (262)
-...|+|++.-. +......++ +.+...+++|..++-.
T Consensus 62 ~~~aDvvi~~vp------~~~~~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 62 AGVVDALVILVV------NAAQVRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp TTTCSEEEECCS------SHHHHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred HhcCCEEEEECC------CHHHHHHHHhChhhHHhhCCCCCEEEec
Confidence 134688876432 223445555 5667778877765543
No 485
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=70.46 E-value=38 Score=26.87 Aligned_cols=82 Identities=11% Similarity=-0.097 Sum_probs=45.1
Q ss_pred CCCeEEEecCCC-CcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-c
Q 024797 84 RGDVVLDLACGK-GGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (262)
Q Consensus 84 ~~~~vLDiGcG~-G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (262)
.+.+||-.|++. |.++..+++ ....+|+.++.++...+.+.+.... ...+.++.+|+.+.... .
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~-----------~~~~~~~~~Dl~~~~~v~~ 88 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKG-----------FGSDLVVKCDVSLDEDIKN 88 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-----------TTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------cCCeEEEEcCCCCHHHHHH
Confidence 467899888762 445555443 2334799999887522222221110 01266788898764311 0
Q ss_pred ----ccCCCCCeeEEEEccccc
Q 024797 159 ----VLADDAPFDICSCQFAMH 176 (262)
Q Consensus 159 ----~~~~~~~fD~V~~~~~l~ 176 (262)
....-+..|+++.+....
T Consensus 89 ~~~~~~~~~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 89 LKKFLEENWGSLDIIVHSIAYA 110 (285)
T ss_dssp HHHHHHHHTSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 000125789999887543
No 486
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=70.25 E-value=7.4 Score=31.00 Aligned_cols=81 Identities=10% Similarity=0.011 Sum_probs=49.8
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-c
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-V 159 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~ 159 (262)
.+.++|-.|++.| ++..+++ ....+|+.+|.+++.++...+.+.. ...++.++.+|+.+..... .
T Consensus 20 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~ 88 (273)
T 1ae1_A 20 KGTTALVTGGSKG-IGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE----------KGLNVEGSVCDLLSRTERDKL 88 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------TTCCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCcch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------cCCceEEEECCCCCHHHHHHH
Confidence 4678888887665 5554433 2334799999998777665544431 1234788899987643210 0
Q ss_pred c----CCC-CCeeEEEEcccc
Q 024797 160 L----ADD-APFDICSCQFAM 175 (262)
Q Consensus 160 ~----~~~-~~fD~V~~~~~l 175 (262)
. ..- +..|+++.+...
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 89 MQTVAHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHHHHHTTSCCCEEEECCCC
T ss_pred HHHHHHHcCCCCcEEEECCCC
Confidence 0 011 678999988754
No 487
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=70.23 E-value=4.7 Score=33.72 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=33.6
Q ss_pred HhccCCCeEEEecCCC-CcchHHHHhcC-CCeEEEEeCChhHHHHHHH
Q 024797 80 LYARRGDVVLDLACGK-GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRT 125 (262)
Q Consensus 80 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~ 125 (262)
....++++||-+|+|. |..+..+++.. ..+|+++|.+++-++.+++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 3457889999999863 44444555533 3489999999998888875
No 488
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=70.05 E-value=11 Score=30.39 Aligned_cols=89 Identities=3% Similarity=-0.027 Sum_probs=51.6
Q ss_pred CeEEEecCCC-Cc-chHHHHhcCC--CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccC
Q 024797 86 DVVLDLACGK-GG-DLIKWDKAKI--GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (262)
Q Consensus 86 ~~vLDiGcG~-G~-~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (262)
.+|.=||||. |. +...+++.+. ..|+.+|.+++.++...+... +.. ..|..+.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g---------------i~~-~~~~~~~------- 60 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG---------------VHT-TQDNRQG------- 60 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC---------------CEE-ESCHHHH-------
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC---------------CEE-eCChHHH-------
Confidence 4688899985 32 2333333332 269999999988777765432 322 2222111
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhc-cCCCcEEEEEe
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSAL-LRPGGTFIGTM 206 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~-L~~gG~li~~~ 206 (262)
-...|+|+..--. .....++.++... ++++- +++++
T Consensus 61 -~~~aDvVilav~p-------~~~~~vl~~l~~~~l~~~~-iiiS~ 97 (280)
T 3tri_A 61 -ALNADVVVLAVKP-------HQIKMVCEELKDILSETKI-LVISL 97 (280)
T ss_dssp -HSSCSEEEECSCG-------GGHHHHHHHHHHHHHTTTC-EEEEC
T ss_pred -HhcCCeEEEEeCH-------HHHHHHHHHHHhhccCCCe-EEEEe
Confidence 1346888865422 3456788888877 76554 55554
No 489
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=69.98 E-value=6.7 Score=30.93 Aligned_cols=81 Identities=11% Similarity=0.076 Sum_probs=49.2
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-cc
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KV 159 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 159 (262)
.+.+||-.|++.| ++..+++ ....+|+.+|.+++.++...+.+... ..++.++.+|+.+.... ..
T Consensus 8 ~~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~ 76 (260)
T 2ae2_A 8 EGCTALVTGGSRG-IGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK----------GFKVEASVCDLSSRSERQEL 76 (260)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHHHH
Confidence 4678888887655 5554433 23347999999987766655444311 23477888998764311 00
Q ss_pred c----CCC-CCeeEEEEcccc
Q 024797 160 L----ADD-APFDICSCQFAM 175 (262)
Q Consensus 160 ~----~~~-~~fD~V~~~~~l 175 (262)
. ..- +..|+++.+...
T Consensus 77 ~~~~~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 77 MNTVANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHHHHHTTTCCCEEEECCCC
T ss_pred HHHHHHHcCCCCCEEEECCCC
Confidence 0 011 678999987754
No 490
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=69.70 E-value=3.5 Score=35.43 Aligned_cols=43 Identities=9% Similarity=0.023 Sum_probs=35.1
Q ss_pred CeEEEecCCCCcchHHHHhcC--CCe----EEEEeCChhHHHHHHHHhc
Q 024797 86 DVVLDLACGKGGDLIKWDKAK--IGY----YVGIDIAEGSIEDCRTRYN 128 (262)
Q Consensus 86 ~~vLDiGcG~G~~~~~l~~~~--~~~----v~gvD~s~~~~~~a~~~~~ 128 (262)
.+|||+.||.|.....+.+.+ ... |.++|+++.++..-+.+..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 589999999999888776544 334 8899999999988888776
No 491
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=69.67 E-value=13 Score=30.95 Aligned_cols=37 Identities=19% Similarity=0.149 Sum_probs=23.3
Q ss_pred hccCCCeEEEecC-C-CCcchHHHHhc-CCCeEEEEeCCh
Q 024797 81 YARRGDVVLDLAC-G-KGGDLIKWDKA-KIGYYVGIDIAE 117 (262)
Q Consensus 81 ~~~~~~~vLDiGc-G-~G~~~~~l~~~-~~~~v~gvD~s~ 117 (262)
...++++||-.|+ | .|..+..+++. +...+..++.++
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP 203 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 3568899999997 3 36666666664 343345555544
No 492
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=69.38 E-value=22 Score=28.70 Aligned_cols=88 Identities=16% Similarity=0.137 Sum_probs=51.5
Q ss_pred CeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccccccCCCC
Q 024797 86 DVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (262)
Q Consensus 86 ~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (262)
.+|.=||+|. |......+....-.|+++|.+++.++.+.+.- +.+ ..+..+. -.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g----------------~~~-~~~~~~~--------~~ 70 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAG----------------ATL-ADSVADV--------AA 70 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTT----------------CEE-CSSHHHH--------TT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC----------------CEE-cCCHHHH--------Hh
Confidence 4788899885 33222222222236999999998777665421 211 2222221 13
Q ss_pred CeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 165 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
.|+|+..-. +......++..+...+++|..++-.
T Consensus 71 -aDvvi~~vp------~~~~~~~v~~~l~~~l~~g~ivv~~ 104 (296)
T 3qha_A 71 -ADLIHITVL------DDAQVREVVGELAGHAKPGTVIAIH 104 (296)
T ss_dssp -SSEEEECCS------SHHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred -CCEEEEECC------ChHHHHHHHHHHHHhcCCCCEEEEe
Confidence 688875432 2345677788888888887766543
No 493
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=69.38 E-value=12 Score=27.60 Aligned_cols=105 Identities=18% Similarity=0.117 Sum_probs=59.0
Q ss_pred CCCeEEEecCCCCcchHHHHhc-CCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccc-ccC
Q 024797 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-VLA 161 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~ 161 (262)
-...|||+|-|+|+.--.+... +...++.+|-.-.. .. ...+..-.++++|+.+.-... ..
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~-------hp---------~~~P~~e~~ilGdi~~tL~~~~~r- 102 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS-------HP---------DSTPPEAQLILGDIRETLPATLER- 102 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC-------CG---------GGCCCGGGEEESCHHHHHHHHHHH-
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc-------CC---------CCCCchHheecccHHHHHHHHHHh-
Confidence 3457999999999988877653 55579999853210 00 112344568889886542100 00
Q ss_pred CCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEE
Q 024797 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (262)
Q Consensus 162 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~ 205 (262)
=..+.-++-+....++--.+......+-.-+..+|.|||.++-.
T Consensus 103 ~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~ 146 (174)
T 3iht_A 103 FGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSS 146 (174)
T ss_dssp HCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred cCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeC
Confidence 03445556555555432000111122233477889999988864
No 494
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=69.16 E-value=15 Score=30.27 Aligned_cols=103 Identities=16% Similarity=0.108 Sum_probs=52.9
Q ss_pred CeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHHHHHhccCccccccccCCC--CCeEEEeCcccccccccccCC
Q 024797 86 DVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS--FPARLICGDCYEVHLDKVLAD 162 (262)
Q Consensus 86 ~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~ 162 (262)
.+|.=+|+|. |......+......|+++|.+++.++..++.... ... ..... .++.....|..+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~-------- 72 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAI---IAE-GPGLAGTAHPDLLTSDIGLA-------- 72 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSE---EEE-SSSCCEEECCSEEESCHHHH--------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCe---EEe-ccccccccccceecCCHHHH--------
Confidence 5789999986 3333222222333699999998887776654210 000 00000 0000011111110
Q ss_pred CCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEEEEeCC
Q 024797 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (262)
Q Consensus 163 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 208 (262)
-..+|+|++.-.-. ....++..+...++++..++.. .+
T Consensus 73 ~~~~D~vi~~v~~~-------~~~~~~~~l~~~l~~~~~vv~~-~~ 110 (359)
T 1bg6_A 73 VKDADVILIVVPAI-------HHASIAANIASYISEGQLIILN-PG 110 (359)
T ss_dssp HTTCSEEEECSCGG-------GHHHHHHHHGGGCCTTCEEEES-SC
T ss_pred HhcCCEEEEeCCch-------HHHHHHHHHHHhCCCCCEEEEc-CC
Confidence 13579988654332 2356778888888887655443 44
No 495
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=68.97 E-value=7.8 Score=33.74 Aligned_cols=41 Identities=10% Similarity=-0.036 Sum_probs=28.7
Q ss_pred cCCCeEEEecCCC-CcchHHHHhcCCCeEEEEeCChhHHHHH
Q 024797 83 RRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDC 123 (262)
Q Consensus 83 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a 123 (262)
-.+.+|+-+|+|. |......++....+|+++|.++.....+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A 286 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQA 286 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHH
Confidence 3688999999986 5555555554444899999988654433
No 496
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=68.73 E-value=14 Score=29.95 Aligned_cols=82 Identities=9% Similarity=-0.117 Sum_probs=51.8
Q ss_pred CCCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc---
Q 024797 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD--- 157 (262)
Q Consensus 84 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 157 (262)
.+.+||-.|++.| ++..+++ ....+|+.+|.+++.++.+.+.+... ...++.++.+|+.+....
T Consensus 40 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dv~d~~~v~~~ 109 (293)
T 3rih_A 40 SARSVLVTGGTKG-IGRGIATVFARAGANVAVAARSPRELSSVTAELGEL---------GAGNVIGVRLDVSDPGSCADA 109 (293)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS---------SSSCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh---------CCCcEEEEEEeCCCHHHHHHH
Confidence 5678888887765 5544433 23347999999988877776665421 124588899998764311
Q ss_pred --cccCCCCCeeEEEEcccc
Q 024797 158 --KVLADDAPFDICSCQFAM 175 (262)
Q Consensus 158 --~~~~~~~~fD~V~~~~~l 175 (262)
.....-+..|+++.+..+
T Consensus 110 ~~~~~~~~g~iD~lvnnAg~ 129 (293)
T 3rih_A 110 ARTVVDAFGALDVVCANAGI 129 (293)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 000012578999987654
No 497
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=68.36 E-value=11 Score=29.73 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=23.7
Q ss_pred CCeEEEecCCC-CcchH-HHHhcCCCeEEEEeCCh
Q 024797 85 GDVVLDLACGK-GGDLI-KWDKAKIGYYVGIDIAE 117 (262)
Q Consensus 85 ~~~vLDiGcG~-G~~~~-~l~~~~~~~v~gvD~s~ 117 (262)
+.+||=+|||. |.... .|+..+.++++.+|.+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 56899999984 43333 34446778999999886
No 498
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=68.19 E-value=28 Score=28.65 Aligned_cols=103 Identities=11% Similarity=0.016 Sum_probs=55.7
Q ss_pred CeEEEecCCC-Cc-chHHHHhcCCCeEEEEeCChhHHHHHHHHhcc-------Cccccc--cccCCCCCeEEEeCccccc
Q 024797 86 DVVLDLACGK-GG-DLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNG-------DADHHQ--RRKKFSFPARLICGDCYEV 154 (262)
Q Consensus 86 ~~vLDiGcG~-G~-~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~-------~~~~~~--~~~~~~~~v~~~~~d~~~~ 154 (262)
.+|-=||+|. |. ++..++..+. .|++.|.+++.++.+.+.... .+.... .......++.+ ..|..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~e- 83 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAE- 83 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHH-
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHHH-
Confidence 5788888885 32 3333333443 799999999999888664321 000000 00000001222 222211
Q ss_pred ccccccCCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEE
Q 024797 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (262)
Q Consensus 155 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li 203 (262)
.-...|+|+..-. ++..-...++.++...++++..++
T Consensus 84 -------av~~aDlVieavp-----e~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 84 -------AVEGVVHIQECVP-----ENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp -------HTTTEEEEEECCC-----SCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred -------HHhcCCEEEEecc-----CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 1245798875432 233556778899999998887554
No 499
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=67.83 E-value=31 Score=26.28 Aligned_cols=76 Identities=13% Similarity=-0.057 Sum_probs=45.1
Q ss_pred CCeEEEecCCCCcchHHHHh---cCCCeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCcccccccc-ccc
Q 024797 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KVL 160 (262)
Q Consensus 85 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~ 160 (262)
+.+||=.|++.| ++..+++ .....|++++.++..++...+... ++.++.+|+.+.... ...
T Consensus 5 ~k~vlVtGasgg-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~D~~~~~~~~~~~ 69 (234)
T 2ehd_A 5 KGAVLITGASRG-IGEATARLLHAKGYRVGLMARDEKRLQALAAELE--------------GALPLPGDVREEGDWARAV 69 (234)
T ss_dssp CCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--------------TCEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--------------hceEEEecCCCHHHHHHHH
Confidence 457887777654 5555443 233479999998876655444321 377888888764311 000
Q ss_pred ----CCCCCeeEEEEcccc
Q 024797 161 ----ADDAPFDICSCQFAM 175 (262)
Q Consensus 161 ----~~~~~fD~V~~~~~l 175 (262)
..-+.+|+++.+...
T Consensus 70 ~~~~~~~~~id~li~~Ag~ 88 (234)
T 2ehd_A 70 AAMEEAFGELSALVNNAGV 88 (234)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCc
Confidence 011468999987654
No 500
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=67.59 E-value=5.2 Score=31.46 Aligned_cols=87 Identities=13% Similarity=0.196 Sum_probs=45.4
Q ss_pred CeEEEecCCC-Cc-chHHHHhcCC---CeEEEEeCChhHHHHHHHHhccCccccccccCCCCCeEEEeCccccccccccc
Q 024797 86 DVVLDLACGK-GG-DLIKWDKAKI---GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (262)
Q Consensus 86 ~~vLDiGcG~-G~-~~~~l~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (262)
.+|.=||||. |. +...+++.+. ..|+++|.+++.++...+... +.. ..|..+.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g---------------~~~-~~~~~e~------ 60 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYG---------------LTT-TTDNNEV------ 60 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHC---------------CEE-CSCHHHH------
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhC---------------CEE-eCChHHH------
Confidence 3677888885 32 2223333332 279999999988777765432 221 1221111
Q ss_pred CCCCCeeEEEEcccccccCCCHHHHHHHHHHHHhccCCCcEEE
Q 024797 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (262)
Q Consensus 161 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L~~gG~li 203 (262)
-...|+|+..--. .....+++++...+++|..++
T Consensus 61 --~~~aDvVilav~~-------~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 61 --AKNADILILSIKP-------DLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp --HHHCSEEEECSCT-------TTHHHHC---CCSSCTTCEEE
T ss_pred --HHhCCEEEEEeCH-------HHHHHHHHHHHhhcCCCCEEE
Confidence 1235777764422 234566677777777665444
Done!