Query 024800
Match_columns 262
No_of_seqs 120 out of 447
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 14:38:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024800.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024800hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 9.4E-96 3E-100 650.9 24.7 238 4-244 2-241 (248)
2 3iqu_A 14-3-3 protein sigma; s 100.0 2.3E-95 8E-100 644.7 23.1 234 1-237 3-236 (236)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 6.2E-95 2.1E-99 648.2 24.8 234 3-239 28-261 (261)
4 2br9_A 14-3-3E, 14-3-3 protein 100.0 7.3E-93 2.5E-97 629.5 24.5 233 3-238 2-234 (234)
5 1o9d_A 14-3-3-like protein C; 100.0 2.7E-92 9.3E-97 633.3 24.2 240 4-245 6-246 (260)
6 2npm_A 14-3-3 domain containin 100.0 2.2E-91 7.4E-96 627.0 24.7 232 5-239 27-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 5.1E-90 1.7E-94 618.0 14.7 234 5-251 28-268 (268)
8 2o8p_A 14-3-3 domain containin 100.0 2.6E-80 9E-85 544.4 20.9 219 5-234 2-226 (227)
9 3nf1_A KLC 1, kinesin light ch 94.9 1.3 4.6E-05 36.6 18.6 188 7-209 28-227 (311)
10 3edt_B KLC 2, kinesin light ch 94.8 1.3 4.5E-05 35.9 17.0 59 150-209 143-201 (283)
11 3vtx_A MAMA; tetratricopeptide 94.5 1.2 4.3E-05 34.4 17.4 163 7-205 6-169 (184)
12 3n71_A Histone lysine methyltr 94.3 0.63 2.2E-05 44.4 13.3 100 96-209 326-425 (490)
13 3u3w_A Transcriptional activat 94.2 2.3 7.8E-05 36.2 17.1 58 150-209 171-228 (293)
14 3qww_A SET and MYND domain-con 93.1 1.3 4.3E-05 41.7 12.9 114 96-227 315-428 (433)
15 3qwp_A SET and MYND domain-con 92.6 0.62 2.1E-05 43.6 10.0 58 151-209 346-403 (429)
16 2qfc_A PLCR protein; TPR, HTH, 92.5 4.4 0.00015 34.3 16.1 73 123-207 154-226 (293)
17 3qww_A SET and MYND domain-con 92.4 0.75 2.6E-05 43.2 10.3 59 151-210 315-373 (433)
18 3edt_B KLC 2, kinesin light ch 92.3 2.3 7.7E-05 34.4 12.2 56 151-207 102-157 (283)
19 3n71_A Histone lysine methyltr 91.7 0.95 3.2E-05 43.2 10.3 59 151-210 326-384 (490)
20 4g1t_A Interferon-induced prot 91.4 7.5 0.00026 34.6 15.9 49 151-204 351-399 (472)
21 3u4t_A TPR repeat-containing p 91.1 5.3 0.00018 32.4 15.3 53 152-205 197-249 (272)
22 3hym_B Cell division cycle pro 90.3 6.9 0.00024 32.4 15.7 46 150-204 252-297 (330)
23 3qwp_A SET and MYND domain-con 89.3 1.1 3.9E-05 41.8 8.4 59 151-210 304-362 (429)
24 4i17_A Hypothetical protein; T 89.3 7.2 0.00025 31.1 13.6 60 7-70 8-67 (228)
25 3ulq_A Response regulator aspa 89.2 3 0.0001 36.6 10.7 73 122-207 101-173 (383)
26 3ulq_A Response regulator aspa 88.5 10 0.00035 33.0 13.8 56 151-208 160-215 (383)
27 4a1s_A PINS, partner of inscut 88.4 12 0.0004 32.5 21.0 190 7-209 49-255 (411)
28 3q15_A PSP28, response regulat 88.3 1.9 6.6E-05 37.9 8.9 74 122-208 99-172 (378)
29 1fch_A Peroxisomal targeting s 88.1 11 0.00038 31.9 15.5 59 7-70 99-157 (368)
30 3fp2_A TPR repeat-containing p 87.7 15 0.00052 33.0 17.4 49 150-207 444-492 (537)
31 4abn_A Tetratricopeptide repea 87.5 17 0.00059 33.4 17.7 173 7-205 103-286 (474)
32 4gcn_A Protein STI-1; structur 87.4 1.7 5.8E-05 32.5 6.8 48 151-207 25-72 (127)
33 2pl2_A Hypothetical conserved 86.5 11 0.00039 30.3 12.9 59 7-70 6-64 (217)
34 3sf4_A G-protein-signaling mod 85.5 16 0.00056 31.1 18.3 56 150-208 203-258 (406)
35 2gw1_A Mitochondrial precursor 85.4 19 0.00066 31.9 16.1 55 150-205 205-265 (514)
36 3ro3_A PINS homolog, G-protein 85.1 8.7 0.0003 27.7 12.9 55 150-207 105-159 (164)
37 2y4t_A DNAJ homolog subfamily 84.8 19 0.00066 31.4 14.6 47 150-205 311-357 (450)
38 3ro2_A PINS homolog, G-protein 84.0 16 0.00055 29.8 20.3 190 7-209 6-215 (338)
39 3ro2_A PINS homolog, G-protein 83.8 16 0.00056 29.7 16.9 56 150-208 199-254 (338)
40 3rkv_A Putative peptidylprolyl 82.4 2.1 7.3E-05 32.7 5.4 54 151-205 28-91 (162)
41 2xpi_A Anaphase-promoting comp 82.3 30 0.001 31.6 19.7 47 150-205 532-578 (597)
42 3sf4_A G-protein-signaling mod 82.1 23 0.00078 30.2 20.7 190 7-209 10-219 (406)
43 2y4t_A DNAJ homolog subfamily 80.3 29 0.00099 30.3 17.3 168 10-205 147-323 (450)
44 2ho1_A Type 4 fimbrial biogene 80.0 21 0.00071 28.4 14.4 166 7-205 38-203 (252)
45 4gco_A Protein STI-1; structur 79.9 5.5 0.00019 29.6 6.8 46 151-205 30-75 (126)
46 3ro3_A PINS homolog, G-protein 79.8 6.4 0.00022 28.4 7.1 56 150-208 25-80 (164)
47 3ieg_A DNAJ homolog subfamily 79.8 25 0.00085 29.1 18.9 47 150-205 288-334 (359)
48 1elr_A TPR2A-domain of HOP; HO 79.4 11 0.00037 26.3 8.1 53 151-205 55-107 (131)
49 3nf1_A KLC 1, kinesin light ch 78.5 25 0.00087 28.5 17.9 184 8-206 71-307 (311)
50 3u3w_A Transcriptional activat 78.1 8.5 0.00029 32.5 8.3 53 151-207 132-185 (293)
51 2gw1_A Mitochondrial precursor 78.0 36 0.0012 30.0 16.2 172 7-205 305-477 (514)
52 2q7f_A YRRB protein; TPR, prot 77.0 25 0.00084 27.6 16.9 59 7-70 58-116 (243)
53 3ieg_A DNAJ homolog subfamily 76.7 31 0.0011 28.5 17.9 168 10-206 124-301 (359)
54 4gcn_A Protein STI-1; structur 76.5 8.1 0.00028 28.6 6.9 52 151-204 59-110 (127)
55 3lf9_A 4E10_D0_1IS1A_001_C (T1 76.3 13 0.00044 29.0 7.9 49 20-69 11-60 (121)
56 4eqf_A PEX5-related protein; a 76.1 35 0.0012 28.9 17.2 59 7-70 66-124 (365)
57 3qky_A Outer membrane assembly 75.5 31 0.0011 28.0 18.2 65 5-73 14-80 (261)
58 3cv0_A Peroxisome targeting si 74.9 33 0.0011 28.0 16.2 60 7-71 22-81 (327)
59 4b4t_Q 26S proteasome regulato 74.6 43 0.0015 29.1 18.6 58 150-209 191-248 (434)
60 4g1t_A Interferon-induced prot 74.5 6.8 0.00023 34.9 7.0 54 151-205 68-122 (472)
61 2xpi_A Anaphase-promoting comp 74.3 52 0.0018 30.0 20.0 55 150-206 491-545 (597)
62 2l6j_A TPR repeat-containing p 74.1 9.2 0.00032 26.2 6.3 45 151-204 21-65 (111)
63 4a1s_A PINS, partner of inscut 74.1 42 0.0014 28.8 17.8 182 8-208 88-294 (411)
64 2kat_A Uncharacterized protein 73.4 19 0.00064 25.3 8.0 49 150-207 35-83 (115)
65 2qfc_A PLCR protein; TPR, HTH, 73.4 12 0.00043 31.4 8.1 189 7-219 76-275 (293)
66 4eqf_A PEX5-related protein; a 73.0 42 0.0014 28.4 15.8 60 6-70 99-158 (365)
67 3gw4_A Uncharacterized protein 72.7 12 0.00042 28.6 7.3 55 151-207 83-137 (203)
68 1na3_A Designed protein CTPR2; 72.2 15 0.00051 24.1 6.8 46 151-205 26-71 (91)
69 1hz4_A MALT regulatory protein 71.5 13 0.00046 31.9 8.0 55 151-206 110-164 (373)
70 2q7f_A YRRB protein; TPR, prot 71.3 35 0.0012 26.7 12.0 60 7-71 24-83 (243)
71 2dba_A Smooth muscle cell asso 71.1 11 0.00038 27.1 6.4 49 151-205 45-93 (148)
72 2vq2_A PILW, putative fimbrial 71.0 33 0.0011 26.3 16.5 166 7-206 9-176 (225)
73 1fch_A Peroxisomal targeting s 70.9 46 0.0016 27.9 19.1 59 7-70 65-123 (368)
74 1xnf_A Lipoprotein NLPI; TPR, 70.7 38 0.0013 27.0 14.0 29 176-205 215-243 (275)
75 3k9i_A BH0479 protein; putativ 70.7 14 0.00048 26.3 6.8 47 151-206 44-90 (117)
76 2xev_A YBGF; tetratricopeptide 70.6 20 0.00068 25.3 7.7 49 151-205 56-104 (129)
77 2pl2_A Hypothetical conserved 69.7 41 0.0014 26.9 18.7 47 6-56 39-85 (217)
78 3sz7_A HSC70 cochaperone (SGT) 69.5 22 0.00074 26.8 8.0 46 151-205 62-107 (164)
79 4gyw_A UDP-N-acetylglucosamine 69.4 92 0.0031 30.8 16.4 167 7-211 10-179 (723)
80 2kck_A TPR repeat; tetratricop 69.2 17 0.00059 24.4 6.8 46 151-205 23-68 (112)
81 3hym_B Cell division cycle pro 68.6 47 0.0016 27.1 18.2 56 150-206 209-265 (330)
82 3uq3_A Heat shock protein STI1 68.2 41 0.0014 26.3 15.4 28 7-34 80-107 (258)
83 3uq3_A Heat shock protein STI1 67.4 43 0.0015 26.2 15.3 46 151-205 156-201 (258)
84 3cv0_A Peroxisome targeting si 67.3 50 0.0017 26.9 16.5 60 7-71 56-115 (327)
85 2kc7_A BFR218_protein; tetratr 67.2 21 0.00073 24.1 6.9 47 151-205 17-63 (99)
86 2xev_A YBGF; tetratricopeptide 67.0 25 0.00084 24.8 7.5 49 151-205 19-67 (129)
87 3q15_A PSP28, response regulat 65.0 68 0.0023 27.7 19.2 54 150-207 238-291 (378)
88 3upv_A Heat shock protein STI1 64.3 23 0.00077 25.2 6.8 46 151-205 21-66 (126)
89 4gco_A Protein STI-1; structur 63.9 22 0.00075 26.1 6.8 47 150-205 63-109 (126)
90 2hr2_A Hypothetical protein; a 63.4 26 0.0009 28.2 7.6 54 150-205 27-85 (159)
91 2lni_A Stress-induced-phosphop 62.4 27 0.00091 24.3 6.8 46 151-205 67-112 (133)
92 1lyp_A CAP18; lipopolysacchari 61.5 19 0.00064 20.9 4.5 26 85-110 4-29 (32)
93 3k9i_A BH0479 protein; putativ 61.3 15 0.00051 26.2 5.3 50 151-206 7-56 (117)
94 2xcb_A PCRH, regulatory protei 61.2 35 0.0012 25.0 7.7 48 151-207 69-116 (142)
95 3q49_B STIP1 homology and U bo 61.0 28 0.00096 24.7 6.8 46 151-205 26-71 (137)
96 1xi4_A Clathrin heavy chain; a 60.7 31 0.0011 37.7 9.4 24 181-204 1284-1307(1630)
97 1elr_A TPR2A-domain of HOP; HO 60.4 31 0.0011 23.7 6.8 50 150-208 20-69 (131)
98 3upv_A Heat shock protein STI1 60.2 30 0.001 24.5 6.8 48 151-207 55-102 (126)
99 3vtx_A MAMA; tetratricopeptide 60.1 26 0.00089 26.6 6.8 46 151-205 22-67 (184)
100 3caz_A BAR protein; thermo-aci 59.5 81 0.0028 26.7 11.2 111 12-166 100-210 (294)
101 3ma5_A Tetratricopeptide repea 58.5 43 0.0015 23.2 9.7 72 151-237 24-95 (100)
102 2ifu_A Gamma-SNAP; membrane fu 58.4 83 0.0028 26.5 12.4 52 150-204 171-222 (307)
103 2vgx_A Chaperone SYCD; alterna 57.4 29 0.001 26.2 6.7 46 151-205 72-117 (148)
104 1qqe_A Vesicular transport pro 57.2 31 0.0011 29.0 7.4 53 151-206 54-106 (292)
105 1elw_A TPR1-domain of HOP; HOP 57.1 32 0.0011 23.1 6.3 45 151-204 55-99 (118)
106 1ihg_A Cyclophilin 40; ppiase 57.1 13 0.00043 33.4 5.1 54 151-205 240-301 (370)
107 3u4t_A TPR repeat-containing p 56.8 73 0.0025 25.3 11.9 27 8-34 5-31 (272)
108 2vyi_A SGTA protein; chaperone 56.3 40 0.0014 23.0 6.8 47 151-206 63-109 (131)
109 1elw_A TPR1-domain of HOP; HOP 56.1 42 0.0014 22.5 6.8 47 151-206 21-67 (118)
110 2vyi_A SGTA protein; chaperone 55.9 41 0.0014 23.0 6.8 47 151-206 29-75 (131)
111 1a17_A Serine/threonine protei 54.4 40 0.0014 24.5 6.8 46 151-205 64-109 (166)
112 2fbn_A 70 kDa peptidylprolyl i 54.3 36 0.0012 26.4 6.9 49 151-205 55-116 (198)
113 3bee_A Putative YFRE protein; 54.0 20 0.00068 25.6 4.8 32 7-41 44-75 (93)
114 3gyz_A Chaperone protein IPGC; 53.0 26 0.00088 27.1 5.7 47 150-205 86-132 (151)
115 4ga2_A E3 SUMO-protein ligase 52.7 42 0.0014 25.2 6.8 46 151-205 48-93 (150)
116 2dba_A Smooth muscle cell asso 52.6 45 0.0015 23.7 6.8 46 151-205 82-127 (148)
117 3fp2_A TPR repeat-containing p 52.5 1.2E+02 0.0043 26.7 19.2 54 152-205 213-271 (537)
118 1na0_A Designed protein CTPR3; 51.7 52 0.0018 22.2 6.8 46 151-205 26-71 (125)
119 2ifu_A Gamma-SNAP; membrane fu 51.5 1.1E+02 0.0037 25.7 15.2 54 150-207 131-185 (307)
120 4gfq_A Ribosome-recycling fact 51.4 35 0.0012 29.1 6.5 73 40-113 127-199 (209)
121 1a17_A Serine/threonine protei 51.2 48 0.0017 24.0 6.9 48 150-206 29-76 (166)
122 1xnf_A Lipoprotein NLPI; TPR, 50.4 69 0.0024 25.4 8.2 47 150-205 93-139 (275)
123 2e2e_A Formate-dependent nitri 50.1 48 0.0016 24.9 6.8 46 151-205 98-143 (177)
124 1kt0_A FKBP51, 51 kDa FK506-bi 49.7 29 0.00099 31.8 6.4 54 150-205 284-345 (457)
125 1na0_A Designed protein CTPR3; 49.5 57 0.0019 21.9 6.8 46 151-205 60-105 (125)
126 1p5q_A FKBP52, FK506-binding p 48.6 17 0.00059 31.7 4.4 54 151-205 164-224 (336)
127 2fbn_A 70 kDa peptidylprolyl i 48.6 50 0.0017 25.6 6.9 46 151-205 105-150 (198)
128 1hh8_A P67PHOX, NCF-2, neutrop 48.3 50 0.0017 25.4 6.8 46 151-205 54-99 (213)
129 3as5_A MAMA; tetratricopeptide 47.5 78 0.0027 23.0 16.5 58 8-70 10-67 (186)
130 2lni_A Stress-induced-phosphop 47.3 28 0.00097 24.2 4.8 46 151-205 33-78 (133)
131 3urz_A Uncharacterized protein 46.9 52 0.0018 26.0 6.8 29 6-34 4-32 (208)
132 3qky_A Outer membrane assembly 46.9 1.1E+02 0.0038 24.5 11.6 63 10-73 152-223 (261)
133 1dd5_A Ribosome recycling fact 45.5 55 0.0019 27.2 6.8 72 40-112 103-174 (185)
134 1wao_1 Serine/threonine protei 45.0 44 0.0015 30.9 6.8 15 190-204 87-101 (477)
135 3as5_A MAMA; tetratricopeptide 44.4 70 0.0024 23.2 6.8 47 151-206 93-139 (186)
136 2v5f_A Prolyl 4-hydroxylase su 44.2 81 0.0028 22.2 7.4 53 151-205 22-74 (104)
137 1ise_A Ribosome recycling fact 43.8 58 0.002 27.1 6.7 72 40-112 103-174 (185)
138 1ge9_A Ribosome recycling fact 43.6 75 0.0026 26.4 7.3 70 40-113 105-174 (184)
139 3gyz_A Chaperone protein IPGC; 43.2 69 0.0024 24.6 6.8 46 151-205 53-98 (151)
140 1is1_A Ribosome recycling fact 43.0 61 0.0021 26.9 6.7 72 40-112 103-174 (185)
141 1zu2_A Mitochondrial import re 42.7 40 0.0014 27.1 5.4 95 130-238 42-143 (158)
142 2ho1_A Type 4 fimbrial biogene 42.4 1.2E+02 0.0041 23.7 16.8 63 6-73 71-133 (252)
143 2wh5_A Acyl-COA-binding domain 42.3 39 0.0013 25.6 4.9 49 20-70 10-74 (106)
144 2yhc_A BAMD, UPF0169 lipoprote 42.1 1.3E+02 0.0043 23.8 17.5 65 7-73 5-69 (225)
145 1wqg_A Ribosome recycling fact 41.9 65 0.0022 26.7 6.7 68 40-112 103-174 (185)
146 2ond_A Cleavage stimulation fa 41.7 1.5E+02 0.0052 24.6 16.5 51 150-205 219-269 (308)
147 2wb7_A PT26-6P; extra chromoso 41.5 86 0.003 30.2 8.2 65 137-203 435-513 (526)
148 1hxi_A PEX5, peroxisome target 41.1 35 0.0012 24.7 4.5 47 150-205 67-113 (121)
149 2ooe_A Cleavage stimulation fa 40.8 34 0.0012 31.4 5.3 53 150-211 62-114 (530)
150 2c2l_A CHIP, carboxy terminus 40.5 45 0.0015 28.0 5.7 49 156-208 53-103 (281)
151 1hh8_A P67PHOX, NCF-2, neutrop 39.8 51 0.0017 25.4 5.6 54 150-204 87-148 (213)
152 1qqe_A Vesicular transport pro 39.7 87 0.003 26.1 7.5 53 151-206 94-147 (292)
153 1eh1_A Ribosome recycling fact 39.5 58 0.002 27.1 6.0 73 40-113 104-176 (185)
154 2vgx_A Chaperone SYCD; alterna 39.4 89 0.0031 23.3 6.8 46 151-205 38-83 (148)
155 3sz7_A HSC70 cochaperone (SGT) 38.7 1.2E+02 0.004 22.5 10.6 26 9-34 14-39 (164)
156 1hxi_A PEX5, peroxisome target 38.3 1E+02 0.0036 22.0 6.9 47 150-205 33-79 (121)
157 1ya0_A SMG-7 transcript varian 38.1 1E+02 0.0035 29.2 8.3 44 130-188 158-210 (497)
158 2yhc_A BAMD, UPF0169 lipoprote 37.8 1.1E+02 0.0037 24.2 7.5 49 151-205 21-69 (225)
159 2fo7_A Synthetic consensus TPR 37.6 92 0.0032 21.0 6.3 46 151-205 52-97 (136)
160 2g0u_A Type III secretion syst 37.3 26 0.00089 26.0 3.1 60 121-187 5-68 (92)
161 2kat_A Uncharacterized protein 37.2 1E+02 0.0034 21.3 11.9 60 6-70 19-78 (115)
162 2ond_A Cleavage stimulation fa 37.0 74 0.0025 26.7 6.6 47 150-205 185-231 (308)
163 3q49_B STIP1 homology and U bo 35.9 1.1E+02 0.0038 21.4 9.4 50 151-209 60-109 (137)
164 4ga2_A E3 SUMO-protein ligase 35.3 79 0.0027 23.6 5.9 27 8-34 33-59 (150)
165 2e2e_A Formate-dependent nitri 35.2 96 0.0033 23.1 6.4 48 150-205 60-109 (177)
166 4i17_A Hypothetical protein; T 33.8 88 0.003 24.4 6.2 46 151-205 59-104 (228)
167 3ma5_A Tetratricopeptide repea 33.5 1.1E+02 0.0039 20.8 10.3 59 6-69 7-65 (100)
168 1w3b_A UDP-N-acetylglucosamine 32.1 2.3E+02 0.0079 23.9 15.4 28 7-34 68-95 (388)
169 2r5s_A Uncharacterized protein 31.8 1.5E+02 0.0051 22.3 7.1 34 6-42 108-141 (176)
170 1p5q_A FKBP52, FK506-binding p 31.5 1.1E+02 0.0037 26.5 6.8 46 151-205 213-258 (336)
171 3ub0_A Non-structural protein 30.5 30 0.001 29.0 2.7 37 150-206 19-55 (199)
172 4gyw_A UDP-N-acetylglucosamine 30.3 93 0.0032 30.8 6.8 47 150-205 93-139 (723)
173 2fo7_A Synthetic consensus TPR 29.1 1.3E+02 0.0045 20.1 6.3 26 9-34 4-29 (136)
174 3u64_A Protein TP_0956; tetrat 27.4 56 0.0019 29.3 4.2 48 150-205 220-268 (301)
175 3rkv_A Putative peptidylprolyl 26.8 1.9E+02 0.0064 21.2 12.2 71 151-238 80-150 (162)
176 2vsy_A XCC0866; transferase, g 26.7 3.7E+02 0.013 24.5 14.8 47 151-206 108-157 (568)
177 2kck_A TPR repeat; tetratricop 26.0 1.4E+02 0.0048 19.4 8.0 27 8-34 8-34 (112)
178 2h6f_A Protein farnesyltransfe 25.8 3.5E+02 0.012 24.0 14.0 58 7-69 98-156 (382)
179 1w3b_A UDP-N-acetylglucosamine 24.4 3.2E+02 0.011 23.0 14.8 24 11-34 4-27 (388)
180 2if4_A ATFKBP42; FKBP-like, al 24.1 1E+02 0.0035 26.7 5.3 49 151-205 196-258 (338)
181 2xcb_A PCRH, regulatory protei 24.1 2E+02 0.0069 20.6 11.0 26 9-34 21-46 (142)
182 4h7y_A Dual specificity protei 23.4 82 0.0028 25.7 4.1 73 117-203 10-86 (161)
183 2c2l_A CHIP, carboxy terminus 22.8 1.1E+02 0.0037 25.5 5.1 28 7-34 5-32 (281)
184 3gw4_A Uncharacterized protein 22.5 2.4E+02 0.0082 20.9 18.5 57 150-209 123-179 (203)
185 2kc7_A BFR218_protein; tetratr 21.8 1.6E+02 0.0055 19.3 5.0 61 9-74 3-64 (99)
186 2vsy_A XCC0866; transferase, g 20.7 2E+02 0.0068 26.4 6.8 47 150-205 73-119 (568)
187 4fhn_B Nucleoporin NUP120; pro 20.4 1.5E+02 0.0052 30.7 6.4 60 10-71 903-964 (1139)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=9.4e-96 Score=650.89 Aligned_cols=238 Identities=59% Similarity=0.925 Sum_probs=223.8
Q ss_pred CcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhh
Q 024800 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH 83 (262)
Q Consensus 4 ~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~ 83 (262)
.+|++++|+|||||||||||||+++||++++ .+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.+
T Consensus 2 ~~re~lv~~AklaeqaeRyddM~~~Mk~v~~--~~-~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~ 78 (248)
T 3uzd_A 2 VDREQLVQKARLAEQAERYDDMAAAMKNVTE--LN-EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKK 78 (248)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-
T ss_pred CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHH
Confidence 4799999999999999999999999999998 77 99999999999999999999999999999999999988888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC--chhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHH
Q 024800 84 VSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG--ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQ 161 (262)
Q Consensus 84 ~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~--eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~ 161 (262)
++.+++||++|++||..+|++|+++||++|||.++++ |++|||+|||||||||+|||..|++|++++++|++||++|+
T Consensus 79 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~ 158 (248)
T 3uzd_A 79 IEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAH 158 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhcccC
Q 024800 162 DIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 241 (262)
Q Consensus 162 ~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~e~~ 241 (262)
++|+.+||||||+|||||||||||||||+|+|++||.+||+|||+||++||+++||+|+|+|+||||||||||+|+++.+
T Consensus 159 ~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~ 238 (248)
T 3uzd_A 159 EISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ 238 (248)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCc
Confidence 99998999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred cCc
Q 024800 242 VSA 244 (262)
Q Consensus 242 ~~~ 244 (262)
+++
T Consensus 239 ~~~ 241 (248)
T 3uzd_A 239 DDD 241 (248)
T ss_dssp ---
T ss_pred ccc
Confidence 655
No 2
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=2.3e-95 Score=644.74 Aligned_cols=234 Identities=61% Similarity=0.935 Sum_probs=228.2
Q ss_pred CCCCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccc
Q 024800 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKN 80 (262)
Q Consensus 1 ~~~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~ 80 (262)
|.+.+|++++|+|||||||||||||+++||++++ .+ ++||.||||||||||||+||++|+|||+|++++|+++.+|+
T Consensus 3 ~~~~~re~~v~~AklaeqaeRyddM~~~mk~v~~--~~-~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~ 79 (236)
T 3iqu_A 3 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVE--KG-EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGS 79 (236)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred cccccHHHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCC
Confidence 3334799999999999999999999999999999 77 99999999999999999999999999999999999988888
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHH
Q 024800 81 EEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (262)
Q Consensus 81 ~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A 160 (262)
+.+++.+++||++|++||..+|++|+++||++|||+++++|++|||+|||||||||+|||..|++|++++++|++||++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A 159 (236)
T 3iqu_A 80 EEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEA 159 (236)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhh
Q 024800 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWT 237 (262)
Q Consensus 161 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~ 237 (262)
+++|+++||||||+|||||||||||||||+|+|++||++||+|||+|++++|+++||+|+|||+||||||||||+|+
T Consensus 160 ~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 160 MDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 99999899999999999999999999999999999999999999999999999999999999999999999999996
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=6.2e-95 Score=648.22 Aligned_cols=234 Identities=70% Similarity=1.077 Sum_probs=227.1
Q ss_pred CCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchh
Q 024800 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (262)
Q Consensus 3 ~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~ 82 (262)
|.+|++++|+|||||||||||||+++||++++ .+ ++||.||||||||||||+||++|+|||+|+++||+++.+|++.
T Consensus 28 m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~--~~-~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~ 104 (261)
T 3ubw_A 28 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--MD-VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 104 (261)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hhhHHHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH
Confidence 34799999999999999999999999999998 77 9999999999999999999999999999999999998889988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHH
Q 024800 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (262)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~ 162 (262)
+++.+++||++|++||..+|++|+++||++|||+++++|++|||+|||||||||+|||..|++|++++++|++||++|++
T Consensus 105 ~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 105 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhcc
Q 024800 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 239 (262)
Q Consensus 163 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~e 239 (262)
+|+++||||||+|||||||||||||||+|+|++||.+||+|||+||++||+|+||+|+|||+||||||||||+|+++
T Consensus 185 iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 185 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999974
No 4
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=7.3e-93 Score=629.52 Aligned_cols=233 Identities=70% Similarity=1.075 Sum_probs=226.4
Q ss_pred CCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchh
Q 024800 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (262)
Q Consensus 3 ~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~ 82 (262)
|++|++++|+||||+||||||||+++||++++ .+ ++||.||||||||||||+||++|+|||+|++++|+++++|++.
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~--~~-~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~ 78 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--MD-VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 78 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhc--cc-CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchH
Confidence 34799999999999999999999999999998 66 9999999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHH
Q 024800 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (262)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~ 162 (262)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 79 ~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 158 (234)
T 2br9_A 79 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 158 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhc
Q 024800 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 238 (262)
Q Consensus 163 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~ 238 (262)
+|+.+||||||+|||||||||||||||+|+|++||.+||+|||+|++++|+++||+|+|+|+||||||||||+|++
T Consensus 159 iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 159 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 9998999999999999999999999999999999999999999999999999999999999999999999999984
No 5
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=2.7e-92 Score=633.32 Aligned_cols=240 Identities=76% Similarity=1.136 Sum_probs=222.3
Q ss_pred CcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCC-CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchh
Q 024800 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTP-ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (262)
Q Consensus 4 ~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~-~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~ 82 (262)
++|++++|+|||++|||||+||+++||++++ .+ +++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 6 ~~re~~v~~AkLaeqaeRyddm~~~mk~v~~--~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~ 83 (260)
T 1o9d_A 6 TAREENVYMAKLAEQAERYEEMVEFMEKVSN--SLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEE 83 (260)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH--TCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHc--cCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHH
Confidence 4699999999999999999999999999998 43 27999999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHH
Q 024800 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (262)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~ 162 (262)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 84 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 163 (260)
T 1o9d_A 84 HVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 163 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhcccCc
Q 024800 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQV 242 (262)
Q Consensus 163 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~e~~~ 242 (262)
+|+.+||||||+|||||||||||||||+|+|++||.+||+|||+|++++|+|+|++|+|+|+||||||||||+|+++.++
T Consensus 164 iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~ 243 (260)
T 1o9d_A 164 IATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 243 (260)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC----
T ss_pred HHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCc
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred Ccc
Q 024800 243 SAI 245 (262)
Q Consensus 243 ~~~ 245 (262)
++.
T Consensus 244 ~~~ 246 (260)
T 1o9d_A 244 DGA 246 (260)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=2.2e-91 Score=627.03 Aligned_cols=232 Identities=64% Similarity=1.009 Sum_probs=224.6
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCC--CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchh
Q 024800 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTP--ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (262)
Q Consensus 5 ~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~--~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~ 82 (262)
+|++++|+|||++|||||+||+++||++++ .+ +++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 27 ~re~~v~~AkLaeqaeRyddmv~~mk~v~~--~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~ 104 (260)
T 2npm_A 27 ARESNVYMAKLAEQAERYDEMAKYMKDVVE--ARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAED 104 (260)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--SCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--ccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHH
Confidence 599999999999999999999999999998 43 16999999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHH
Q 024800 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (262)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~ 162 (262)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|++||++|++
T Consensus 105 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 184 (260)
T 2npm_A 105 ASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATV 184 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhcc
Q 024800 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 239 (262)
Q Consensus 163 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~e 239 (262)
+| .+||||||+|||||||||||||||+|++++||++||+|||+|++++|+|+||+|+|+|+||||||||||+|+++
T Consensus 185 iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 185 VA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=5.1e-90 Score=617.98 Aligned_cols=234 Identities=24% Similarity=0.442 Sum_probs=202.3
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhh-hcccc-hh
Q 024800 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EGRKN-EE 82 (262)
Q Consensus 5 ~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e-~~~~~-~~ 82 (262)
+|++++|+|||||||||||||+++| ++ ++ ++||.||||||||||||+||++|+|||+|++++|++ +.+|+ +.
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e--~~-~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~ 101 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TE--SS-DFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNE 101 (268)
T ss_dssp ------------------CHHHHHH---TC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---Hh--cC-CcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHH
Confidence 5999999999999999999999999 66 66 999999999999999999999999999999999999 67787 88
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHH
Q 024800 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (262)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~ 162 (262)
+++.+++||++|++||..+|++|+++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|++||++|++
T Consensus 102 ~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 102 FIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhcC--CCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH---HHHhhcccCCCchHhHHHHHHHHHhhHhhhh
Q 024800 163 IALTDL--APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE---AIAELDTLGEESYKDSTLIMQLLRDNLTLWT 237 (262)
Q Consensus 163 ~a~~~L--~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~---Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~ 237 (262)
+|+++| |||||||||||||||||||||+|+|++||++||+|||+ ||+++|+|+||+ |+||||||||||+|+
T Consensus 181 iA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWt 256 (268)
T 3efz_A 181 RERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWE 256 (268)
T ss_dssp HHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhh
Confidence 999899 99999999999999999999999999999999999999 999999999987 999999999999999
Q ss_pred cccCcCccchhhHh
Q 024800 238 SDMQVSAIFSSGVF 251 (262)
Q Consensus 238 ~e~~~~~~~~~~~~ 251 (262)
++ ..+.+||+||
T Consensus 257 sd--~~~~~~~~~~ 268 (268)
T 3efz_A 257 QG--CSGLLTSAFF 268 (268)
T ss_dssp TT--CCTTCCCCCC
T ss_pred cc--ccchhHhccC
Confidence 95 6788888886
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=2.6e-80 Score=544.40 Aligned_cols=219 Identities=21% Similarity=0.254 Sum_probs=197.6
Q ss_pred cHHhHH---HHHHHHHHhcCHHHHHHHHHHHhhcc--CCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhccc
Q 024800 5 TREQYV---YLAKLAEQAERYEEMVKFMDSLVTSS--TPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRK 79 (262)
Q Consensus 5 ~re~l~---~~Aklaeq~eRy~Dm~~~mk~~i~~~--~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~ 79 (262)
+|++++ |+||||+||||||||+++||++++.. .+ ++||.||||||||||||+||++|+|||+|+++||++ +|
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~-~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~ 78 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFEN-SEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LN 78 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CS
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cC
Confidence 589999 99999999999999999999999710 13 899999999999999999999999999999999998 67
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHH
Q 024800 80 NEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKA 159 (262)
Q Consensus 80 ~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~ 159 (262)
++.+++.+++||++|++||..+|++|+++||++|||++ |++|||+|||||||||+|||..|+ +++|++||++
T Consensus 79 ~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~ 150 (227)
T 2o8p_A 79 NDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQD 150 (227)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHH
Confidence 78889999999999999999999999999999999998 999999999999999999999998 8999999999
Q ss_pred HHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhccc-CCCchHhHHHHHHHHHhhHh
Q 024800 160 AQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTL-GEESYKDSTLIMQLLRDNLT 234 (262)
Q Consensus 160 A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l-~ee~~~ds~~IlqLLrdNl~ 234 (262)
|+++|+++||||||+||||+||||||||||+|+|++||.+|++||+.+--++..- +.+.+.++|+|+|+|||||.
T Consensus 151 A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 151 AFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENMDRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC----
T ss_pred HHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHhcc
Confidence 9999998999999999999999999999999999999999999999662222211 22358889999999999984
No 9
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.93 E-value=1.3 Score=36.59 Aligned_cols=188 Identities=18% Similarity=0.170 Sum_probs=100.6
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcc--CC--CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhh-hhc--cc
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSS--TP--ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQK-EEG--RK 79 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~--~~--~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~-e~~--~~ 79 (262)
+-+..++.+....|+|++++.++++.++.. .+ ..+....-...+..+|-. .+....|...+...... ... ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 456678888989999999999999988621 00 011222223334443322 23334444444322111 000 00
Q ss_pred chh----hhHHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHH
Q 024800 80 NEE----HVSLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTM 154 (262)
Q Consensus 80 ~~~----~~~~i~~yr-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~ 154 (262)
... ...+..-|. ..=-++-...+...+.+.....-+. .......+-..|..|... ++ .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHHH
Confidence 000 001111110 0001223334444444443321111 112222233344443222 11 36799
Q ss_pred HHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 155 LSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 155 ~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
+.|++|+++++...++.+|.......+.+..++. .|+.++|+...+++++.+-.
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 9999999999877888889888888888877776 69999999999999876544
No 10
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.80 E-value=1.3 Score=35.87 Aligned_cols=59 Identities=25% Similarity=0.284 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
.+.|...|++|+.+++...++.+|.......|.+..++. +|+.++|+...++++..+-.
T Consensus 143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 367899999999999888888899888888888877776 69999999999999876544
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.54 E-value=1.2 Score=34.43 Aligned_cols=163 Identities=14% Similarity=0.150 Sum_probs=84.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~ 86 (262)
.-...++.+..+-|+|++++++.++.++ .+ |. +.+=...+..+|-. .+....+...+........... ......
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~~~-~~~~~~ 79 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLK--AD-PN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTTSA-EAYYIL 79 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCCH-HHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCchhH-HHHHHH
Confidence 4556789999999999999999999998 44 44 45555666666644 3444455555543322221110 000000
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHh
Q 024800 87 VKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (262)
Q Consensus 87 i~~yr~-ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~ 165 (262)
..-+.. .=-++-...+...+. +-|.. ..+ +...|..|.-+ ++ -+.|.+.|++|+++
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~-----~~~~~----~~~--~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIA-----LNTVY----ADA--YYKLGLVYDSM-----GE-----HDKAIEAYEKTISI-- 136 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH-----HCTTC----HHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHcCCHHHHHHHHHHHHH-----hCccc----hHH--HHHHHHHHHHh-----CC-----chhHHHHHHHHHHh--
Confidence 000000 000111222222222 12321 112 22334443222 11 35688999998864
Q ss_pred hcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 166 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.|.+| ....|.+..|+ -+|+.++|+..-++|++
T Consensus 137 ---~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 ---KPGFI---RAYQSIGLAYE-GKGLRDEAVKYFKKALE 169 (184)
T ss_dssp ---CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ---cchhh---hHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 45554 34455555555 48999999987777654
No 12
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.25 E-value=0.63 Score=44.44 Aligned_cols=100 Identities=11% Similarity=0.081 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q 024800 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (262)
Q Consensus 96 ~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~Pir 175 (262)
+|-..+|...+.+-...|=|... ...=-+.--|..|+..-. -+.|...|++|+++-+..|+|.||--
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp---~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNL---YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSH---HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 35566777888777766655431 111111222333322211 25689999999999999999999999
Q ss_pred HhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 176 LGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 176 LgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
+....|.++.|+. .|+.++|..+.++|++--..
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999998887 69999999999998875544
No 13
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.22 E-value=2.3 Score=36.16 Aligned_cols=58 Identities=10% Similarity=0.047 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
-++|...|++|++.++ .++..+|....+..|.+..|++ +|+.++|+...++|++-+..
T Consensus 171 ~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 171 LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 3679999999999986 4666777777788999988887 79999999999999887644
No 14
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=93.07 E-value=1.3 Score=41.66 Aligned_cols=114 Identities=14% Similarity=0.062 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q 024800 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (262)
Q Consensus 96 ~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~Pir 175 (262)
+|...+|...+.+-.+.|=|...+ ..=-+.--|.-|+.. | --+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~---~a~~~~nLa~~y~~~-----g-----~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVY---MLHMMYQAMGVCLYM-----Q-----DWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchH---HHHHHHHHHHHHHhh-----c-----CHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 455677778887777766554311 111111122222211 1 025689999999999999999999999
Q ss_pred HhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHH
Q 024800 176 LGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQ 227 (262)
Q Consensus 176 LgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~~~ds~~Ilq 227 (262)
.....|.+.-|+. .|+.++|..+-++|++=-... +.++ .+++..+.+
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~~---lG~~-Hp~~~~l~~ 428 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEVA---HGKD-HPYISEIKQ 428 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH---TCTT-CHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHH---cCCC-ChHHHHHHH
Confidence 9999999888776 799999999988887755443 4444 344444433
No 15
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=92.61 E-value=0.62 Score=43.60 Aligned_cols=58 Identities=12% Similarity=0.074 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
+.|...|++|+++-+..++|.||.......|.++-|.. .|+.++|..+.++|++--..
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH
Confidence 66899999999999989999999999999999998877 79999999998888875544
No 16
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=92.46 E-value=4.4 Score=34.29 Aligned_cols=73 Identities=10% Similarity=0.066 Sum_probs=49.2
Q ss_pred hhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHH
Q 024800 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQ 202 (262)
Q Consensus 123 kVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~ 202 (262)
.+..+...|..|...-+ -+.|...|++|+++++. .+...........|.+..|+. +|+.++|+...++
T Consensus 154 ~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~k 221 (293)
T 2qfc_A 154 NLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHH
Confidence 34344456666644322 35689999999999863 433222233566777777665 7999999999999
Q ss_pred HHHHH
Q 024800 203 AFEEA 207 (262)
Q Consensus 203 afd~A 207 (262)
|++-+
T Consensus 222 al~~~ 226 (293)
T 2qfc_A 222 AIEIS 226 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98766
No 17
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.37 E-value=0.75 Score=43.24 Aligned_cols=59 Identities=7% Similarity=-0.013 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAE 210 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ 210 (262)
+.|...|++|+++.+.-|.|.||-.+...-|.+.-|.. +|+.++|..+.++|++--...
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 373 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKH 373 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHH
Confidence 56788999999999889999999999988888877776 799999999999998765543
No 18
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=92.35 E-value=2.3 Score=34.43 Aligned_cols=56 Identities=18% Similarity=0.094 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
+.|.+.|++|+.+++...+|.+|.......|.+..++. +|+.++|+...+++++-.
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 56899999999999888888899988888888887776 799999999999998864
No 19
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=91.66 E-value=0.95 Score=43.22 Aligned_cols=59 Identities=15% Similarity=0.042 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAE 210 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ 210 (262)
+.|...|++|+++.+.-|.|.||-.+...-|.+..|.. .|+.++|..+.++|++--...
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHH
Confidence 45777899999999889999999999999999888876 799999999999998765543
No 20
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=91.37 E-value=7.5 Score=34.60 Aligned_cols=49 Identities=14% Similarity=0.106 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 204 (262)
++|.+.|++|+++ .|.++..-.+.+++..+.+..+|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5689999999853 344455556677888888777899999987655544
No 21
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=91.09 E-value=5.3 Score=32.41 Aligned_cols=53 Identities=13% Similarity=0.048 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 152 NTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 152 ~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.|...|++|+++....-.+.++.......+.+.+| ...|+.++|+...++|+.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYY-TINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHh
Confidence 37889999999885433322222223344445444 458999999987777664
No 22
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=90.31 E-value=6.9 Score=32.41 Aligned_cols=46 Identities=11% Similarity=0.079 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 204 (262)
.+.|...|++|+++. |.+| ....+.+..++ .+|+.++|+...++++
T Consensus 252 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 252 YAEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 356889999998753 3443 23344555544 4799999988766654
No 23
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=89.32 E-value=1.1 Score=41.76 Aligned_cols=59 Identities=14% Similarity=-0.034 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAE 210 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ 210 (262)
+.|...|++|+++.+.-|+|.||..+...-|.+.-|.. +|+.++|..+.++++.--..-
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~~ 362 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRIF 362 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHHH
Confidence 45677788887777778999999999999998877766 799999999999988755443
No 24
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=89.28 E-value=7.2 Score=31.13 Aligned_cols=60 Identities=13% Similarity=0.022 Sum_probs=42.3
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (262)
+.+..++.+.-+.|+|++++.++.+.++ .. |+-+..-...+..+|-. .+....|...+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~--~~-~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLK--LT-NNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HT-TTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHh--cc-CCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 6778899999999999999999999998 44 53444444445555543 4555666666654
No 25
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.25 E-value=3 Score=36.64 Aligned_cols=73 Identities=16% Similarity=0.185 Sum_probs=47.4
Q ss_pred hhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHH
Q 024800 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAK 201 (262)
Q Consensus 122 skVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk 201 (262)
...+|+-.+|.++...-. -+.|...|++|+.+++. . |.+|..-....+.+..|+. +|+.++|+...+
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~ 167 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-KDRIEKAEFFFKMSESYYY-MKQTYFSMDYAR 167 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-CCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 344555667777643322 35689999999988753 3 2333333344445555554 899999999988
Q ss_pred HHHHHH
Q 024800 202 QAFEEA 207 (262)
Q Consensus 202 ~afd~A 207 (262)
+|++-+
T Consensus 168 ~al~~~ 173 (383)
T 3ulq_A 168 QAYEIY 173 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887754
No 26
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=88.52 E-value=10 Score=33.04 Aligned_cols=56 Identities=20% Similarity=0.051 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 208 (262)
+.|...|++|+++... .+.. +.+.+.+++.--..|.-+|+.++|+...++|++-+-
T Consensus 160 ~~A~~~~~~al~~~~~-~~~~-~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 215 (383)
T 3ulq_A 160 YFSMDYARQAYEIYKE-HEAY-NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAE 215 (383)
T ss_dssp HHHHHHHHHHHHHHHT-CSTT-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-Cccc-hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 5689999999999964 3332 445555555544445558999999998888886543
No 27
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=88.45 E-value=12 Score=32.50 Aligned_cols=190 Identities=16% Similarity=0.093 Sum_probs=98.0
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchh
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~e----ERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~ 82 (262)
..+..++....+.|+|++++.++++.++ .. +. +.+ =...+..+|-. .+....+...+....+.....++..
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQ--AG-TE-DLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CS-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHH--hc-cc-ChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCch
Confidence 4566788888899999999999999997 33 43 222 23344444432 3445555555443222111011110
Q ss_pred -hh----HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhc------c-ccchHHHH
Q 024800 83 -HV----SLVKDY-RSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEF------K-VGDERKAA 149 (262)
Q Consensus 83 -~~----~~i~~y-r~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~------~-~~~~~~~~ 149 (262)
.. .+..-| ...=-++-...+...+.+.... .+.......+...|..|...-+. . ..++-...
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~ 198 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA 198 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHH
Confidence 00 000000 0011123344455555554332 11222333334455555444330 0 01222345
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
.+.|.+.|++|++++... +.+|.......+.+..++ -.|+.++|+...++|++-+-.
T Consensus 199 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHh
Confidence 678899999999988643 233444444455555544 489999999998888775543
No 28
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=88.34 E-value=1.9 Score=37.94 Aligned_cols=74 Identities=15% Similarity=0.132 Sum_probs=50.0
Q ss_pred hhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHH
Q 024800 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAK 201 (262)
Q Consensus 122 skVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk 201 (262)
...+|+-.+|.++...-. -+.|...|++|+.++.. + +.+|..-....|.+..|+. +|+.++|+...+
T Consensus 99 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~~ 165 (378)
T 3q15_A 99 LKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-V-SDDIEKAEFHFKVAEAYYH-MKQTHVSMYHIL 165 (378)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-C-CChHHHHHHHHHHHHHHHH-cCCcHHHHHHHH
Confidence 444566677777644322 35689999999998853 3 2334444555556666665 799999999999
Q ss_pred HHHHHHH
Q 024800 202 QAFEEAI 208 (262)
Q Consensus 202 ~afd~Ai 208 (262)
+|++-.-
T Consensus 166 ~al~~~~ 172 (378)
T 3q15_A 166 QALDIYQ 172 (378)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887554
No 29
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=88.10 E-value=11 Score=31.89 Aligned_cols=59 Identities=17% Similarity=0.217 Sum_probs=37.9
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (262)
.-+..++.+....|+|++++.++++.++ .+ |. +.+=...+..+|-. .+....|...+..
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLE--LK-PD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHh--cC-CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4556778888888888888888888886 33 33 44555555555543 3455555555544
No 30
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=87.74 E-value=15 Score=32.96 Aligned_cols=49 Identities=8% Similarity=0.100 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
.+.|...|++|+++ .|.+| ....+.+..++ -+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 46688888888764 45555 34455555555 4799999999888777644
No 31
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=87.50 E-value=17 Score=33.39 Aligned_cols=173 Identities=17% Similarity=0.141 Sum_probs=91.7
Q ss_pred HhHHHHHHHHHHhcCH-HHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhH
Q 024800 7 EQYVYLAKLAEQAERY-EEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVS 85 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy-~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~ 85 (262)
+-+..++++....|+| ++++.++++.++ .+ |. ..+=...+..+|-.. +....|...+....+.... ......
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~--~~-p~-~~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~~ 175 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVK--LE-PE-LVEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQN 175 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHh--hC-CC-CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHHH
Confidence 4556777777778888 888888888876 33 33 455566666666443 4455555555432222111 111111
Q ss_pred HHHHHHH----------HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHH
Q 024800 86 LVKDYRS----------KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (262)
Q Consensus 86 ~i~~yr~----------ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~ 155 (262)
+..-|.. .=-++-...++..+.+ -|.. ..+ +-..|..|.... |..+. ...-.+.|.+
T Consensus 176 lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~--~~~lg~~~~~~~-~~~~~-~~g~~~~A~~ 242 (474)
T 4abn_A 176 LSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRS--WYILGNAYLSLY-FNTGQ-NPKISQQALS 242 (474)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHHH-HHTTC-CHHHHHHHHH
T ss_pred HHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHHH-Hhhcc-ccchHHHHHH
Confidence 1111111 1112334444454443 2321 222 233455544330 11222 1223577999
Q ss_pred HHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 156 SYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 156 aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+|++|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 243 ~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 243 AYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99999876 33222555667777777776 7999999987777654
No 32
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=87.44 E-value=1.7 Score=32.50 Aligned_cols=48 Identities=19% Similarity=0.328 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
+.|.+.|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.-.
T Consensus 25 ~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEVG 72 (127)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHhC
Confidence 6799999999875 45554 345677777776 799999999888887643
No 33
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=86.54 E-value=11 Score=30.30 Aligned_cols=59 Identities=12% Similarity=0.112 Sum_probs=37.2
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (262)
+-+..++.+..+.|+|++++..+.+.++ .+ | =+.+=...+..++-. .+....+...+..
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p-~~~~a~~~lg~~~~~-~g~~~~A~~~~~~ 64 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALK--EN-P-QDPEALYWLARTQLK-LGLVNPALENGKT 64 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT--TS-S-SCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-C-CCHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4566777788888888888888888876 33 3 345555555555543 3445555555543
No 34
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=85.48 E-value=16 Score=31.11 Aligned_cols=56 Identities=16% Similarity=0.064 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 208 (262)
.+.|...|++|++++.. . +.++.......|.+..+ ..+|+.++|+...++|++-+-
T Consensus 203 ~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~~ 258 (406)
T 3sf4_A 203 FRDAVIAHEQRLLIAKE-F-GDKAAERRAYSNLGNAY-IFLGEFETASEYYKKTLLLAR 258 (406)
T ss_dssp HHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c-CCcHHHHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHHH
Confidence 35688899999988864 2 22232223344444444 457999999998888876543
No 35
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=85.43 E-value=19 Score=31.89 Aligned_cols=55 Identities=16% Similarity=0.047 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhhcC--CCCC----chhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDL--APTH----PIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L--~pt~----PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|...|+++++.-...+ .|.+ |-......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5668888888887443333 4444 5555566666666665 7999999998888765
No 36
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=85.08 E-value=8.7 Score=27.65 Aligned_cols=55 Identities=15% Similarity=0.025 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
-+.|.+.|++|++++... + .+|.......+.+..++ -.|+.++|+...++|++-+
T Consensus 105 ~~~A~~~~~~a~~~~~~~-~-~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQEL-K-DRIGEGRACWSLGNAYT-ALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-c-chHhHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHH
Confidence 356889999999988642 2 22333344445555544 4799999999888877654
No 37
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=84.83 E-value=19 Score=31.43 Aligned_cols=47 Identities=13% Similarity=0.078 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|...|++|+++ .|.+| ....+.+..+. ..|+.++|+...++++.
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 35678888888764 34444 33444454444 57999999988887764
No 38
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=84.04 E-value=16 Score=29.81 Aligned_cols=190 Identities=13% Similarity=0.029 Sum_probs=98.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHH----HHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchh
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEE----RNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eE----RnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~ 82 (262)
..+...+....+.|+|++++.++++.++ .. +. +.+. ...+..+|-. .+....+...+..........++..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQ--VG-TE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh--hC-cc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccH
Confidence 5677889999999999999999999987 33 33 3221 2233333332 3344444444432211111011110
Q ss_pred h-h----HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhcc----------ccchH
Q 024800 83 H-V----SLVKDY-RSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFK----------VGDER 146 (262)
Q Consensus 83 ~-~----~~i~~y-r~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~----------~~~~~ 146 (262)
. . .+..-| ...--++-...+...+.+.... .+.......+...|..|...-... ..++-
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhH
Confidence 0 0 000111 0111123344445555554432 222333444555677766654411 01222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 147 ~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
....+.|.+.|++|+.++... +.+|.......+.+..++ -.|+.++|+...+++++-+-.
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHh
Confidence 344677888889988887542 223433334444454444 479999999998888765543
No 39
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=83.76 E-value=16 Score=29.73 Aligned_cols=56 Identities=16% Similarity=-0.040 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 208 (262)
.+.|.+.|++|++++... .+|...+.+++.-...|...|+.++|+...+++++-+-
T Consensus 199 ~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 356889999999988642 23444444444444455568999999999988876543
No 40
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=82.35 E-value=2.1 Score=32.68 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHhhc---CCCC-------CchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTD---LAPT-------HPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~---L~pt-------~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+.... -.|+ +|....+..|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 56899999999986432 1233 67777888888888776 7999999998888754
No 41
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=82.32 E-value=30 Score=31.63 Aligned_cols=47 Identities=6% Similarity=0.065 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|.+.|++++++ .|.+| ....+.+.. |...|+.++|.+..+++++
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 45688888888765 35555 233333433 4458999999988777665
No 42
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=82.06 E-value=23 Score=30.16 Aligned_cols=190 Identities=14% Similarity=0.044 Sum_probs=97.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchh
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~e----ERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~ 82 (262)
..+..++...-..|+|++++.++.+.++ .. +. +.+ =...++.+|-. .+....|...+.....-....++..
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 84 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQ--VG-TE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 84 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-cc-cHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccH
Confidence 4566788888899999999999999997 33 43 222 22344444432 3444445444432111111011110
Q ss_pred h-----hHHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhh-------ccc---cchH
Q 024800 83 H-----VSLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAE-------FKV---GDER 146 (262)
Q Consensus 83 ~-----~~~i~~yr-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE-------~~~---~~~~ 146 (262)
. .....-|. ..=-++-...+...+.+.... .+.......+-..|..|...-. -.. .++.
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhH
Confidence 0 00001110 011123344455555554432 1112223333344555444433 000 1233
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 147 ~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
....+.|...|++|+.++.. . +.+|.......|.+..++. +|+.++|+...++|+.-+-.
T Consensus 160 ~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 219 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIAKE 219 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHHH-HTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHHh
Confidence 44577899999999998864 3 3344444455555555554 79999999998888765433
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=80.33 E-value=29 Score=30.27 Aligned_cols=168 Identities=13% Similarity=0.096 Sum_probs=85.0
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHHHHH
Q 024800 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (262)
Q Consensus 10 ~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~i~~ 89 (262)
..+|.+..+.|+|++++..+.++++ .. +-+..-...+..+|-. .+....|...+.......... ......+..-
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~--~~--~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~ 220 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILE--VC--VWDAELRELRAECFIK-EGEPRKAISDLKAASKLKNDN-TEAFYKISTL 220 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH--HC--TTCHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHCSC-HHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH--hC--CCChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 3457778889999999999999987 33 3355556666666643 355566666665433322111 0111111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhh--------ccccchhhhhccccchHHHHHHHHHHHHHHH
Q 024800 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKM--------KGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (262)
Q Consensus 90 yr~-ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~Km--------kgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A 160 (262)
|.. .=-++-......++. +-|.. ......+..+ .|+.|. ..+ -.+.|...|++|
T Consensus 221 ~~~~g~~~~A~~~~~~~~~-----~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~g-----~~~~A~~~~~~~ 283 (450)
T 2y4t_A 221 YYQLGDHELSLSEVRECLK-----LDQDH--KRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESV 283 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHH-----HCTTC--HHHHHHHHHHHHHHHHHHHHHHHH-----HHT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH-----hCCCh--HHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHH
Confidence 111 001122222333332 12221 1111111000 022211 111 245688888888
Q ss_pred HHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 161 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
++ +.|.+|....-++..-.-.|.-+|+.++|+...++++.
T Consensus 284 l~-----~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 284 MK-----TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HH-----HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred Hh-----cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 75 34667765444444434445558999999999888764
No 44
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=80.05 E-value=21 Score=28.42 Aligned_cols=166 Identities=9% Similarity=-0.007 Sum_probs=82.9
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~ 86 (262)
+-+..+|.+..+.|+|++++.+++++++ .. +. +.+-...+..+|-. .+..-.|...+....+..... ......+
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~-~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~-~~~~~~l 111 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALE--ID-PS-SADAHAALAVVFQT-EMEPKLADEEYRKALASDSRN-ARVLNNY 111 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHh--cC-CC-hHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCcCc-HHHHHHH
Confidence 3456788888899999999999999987 33 33 34555555555543 455555666654433221100 0111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhh
Q 024800 87 VKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (262)
Q Consensus 87 i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~ 166 (262)
..-|.. ..--.+.+..++..+- ....+.. ...+...|..|... ++ .+.|.+.|++|++.
T Consensus 112 a~~~~~------~g~~~~A~~~~~~~~~-~~~~~~~-~~~~~~la~~~~~~-----g~-----~~~A~~~~~~~~~~--- 170 (252)
T 2ho1_A 112 GGFLYE------QKRYEEAYQRLLEASQ-DTLYPER-SRVFENLGLVSLQM-----KK-----PAQAKEYFEKSLRL--- 170 (252)
T ss_dssp HHHHHH------TTCHHHHHHHHHHHTT-CTTCTTH-HHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH---
T ss_pred HHHHHH------HhHHHHHHHHHHHHHh-CccCccc-HHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHhc---
Confidence 111111 0111233333333322 1111211 22223344444222 11 35678888888764
Q ss_pred cCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 167 DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 167 ~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.|.+| ....+.+..++. .|+.++|....++++.
T Consensus 171 --~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 171 --NRNQP---SVALEMADLLYK-EREYVPARQYYDLFAQ 203 (252)
T ss_dssp --CSCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred --CcccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 23333 233444544444 7999999887777654
No 45
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=79.90 E-value=5.5 Score=29.64 Aligned_cols=46 Identities=17% Similarity=0.138 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|.+.|++|+++ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5688999999864 34544 455666666665 7999999987777654
No 46
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=79.84 E-value=6.4 Score=28.44 Aligned_cols=56 Identities=16% Similarity=-0.011 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 208 (262)
.+.|...|++|++++... .+|..++.+++.--..|-..|+.++|+...++|++-+-
T Consensus 25 ~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 25 FRDAVIAHEQRLLIAKEF---GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 356899999999998642 33445555555444444458999999999999887653
No 47
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=79.79 E-value=25 Score=29.15 Aligned_cols=47 Identities=13% Similarity=0.071 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|.+.|++|+++ .|.+| ....+.+..++ ..|+.++|+...++|++
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 35688888888765 34444 34555565555 48999999887777653
No 48
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=79.42 E-value=11 Score=26.30 Aligned_cols=53 Identities=6% Similarity=-0.007 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+.. ..++.+|.......+.+..++. +|+.++|+...+++++
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 568899999998875 3445555445566677776665 7999999887666655
No 49
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=78.55 E-value=25 Score=28.54 Aligned_cols=184 Identities=14% Similarity=0.112 Sum_probs=89.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcc--C--CCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhh-hc--ccc
Q 024800 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSS--T--PATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EG--RKN 80 (262)
Q Consensus 8 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~--~--~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e-~~--~~~ 80 (262)
-+..++.+....|+|++++.++++.+... . +..+....-...+..+|- ..+....|...+....... .. ...
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 35578888888999999999999988631 0 101112222333343332 2344445555554322211 00 000
Q ss_pred hhh----hHHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHH
Q 024800 81 EEH----VSLVKDY-RSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (262)
Q Consensus 81 ~~~----~~~i~~y-r~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~ 155 (262)
... ..+..-| ...=-++-.......+.+.....-+. ....+..+...|..|...-. .+.|..
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~----------~~~A~~ 216 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD---DPNVAKTKNNLASCYLKQGK----------FKQAET 216 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT---CHHHHHHHHHHHHHHHHHTC----------HHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHcCC----------HHHHHH
Confidence 100 0000101 00011233444455555544332221 11222233334444432211 356788
Q ss_pred HHHHHHHHHhh-----------------------------------------cCCCCCchhHhHhhhHHHHHHHHhCCHH
Q 024800 156 SYKAAQDIALT-----------------------------------------DLAPTHPIRLGLALNFSVFYYEILNSSE 194 (262)
Q Consensus 156 aY~~A~~~a~~-----------------------------------------~L~pt~PirLgLaLN~SVF~yEi~~~~~ 194 (262)
.|++|++++.. .....+|.......+.+..|.. .|+.+
T Consensus 217 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~ 295 (311)
T 3nf1_A 217 LYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFE 295 (311)
T ss_dssp HHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHH
Confidence 88888877532 1122456666666666666655 79999
Q ss_pred HHHHHHHHHHHH
Q 024800 195 KACTMAKQAFEE 206 (262)
Q Consensus 195 ~A~~iAk~afd~ 206 (262)
+|+...++|++-
T Consensus 296 ~A~~~~~~al~l 307 (311)
T 3nf1_A 296 AAETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988887753
No 50
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=78.14 E-value=8.5 Score=32.48 Aligned_cols=53 Identities=15% Similarity=0.092 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhH-hhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGL-ALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgL-aLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
+.|...|++|+++. .+..++..... ..|.+++|++ +|+.++|+..-++|++.+
T Consensus 132 ~~Ai~~~~~al~~~---~~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 132 EYCILELKKLLNQQ---LTGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHTC---CCCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh---cccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 56899999999854 22333433333 4455555555 899999999999988644
No 51
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=77.98 E-value=36 Score=30.03 Aligned_cols=172 Identities=10% Similarity=-0.007 Sum_probs=79.6
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~ 86 (262)
+-+..++.+....|+|++++.+++++++ .. |. +.+-...+..+|-. .+....+...+........... ......
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~-~~~~~l 378 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAKE--LD-PE-NIFPYIQLACLAYR-ENKFDDCETLFSEAKRKFPEAP-EVPNFF 378 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHH--TC-SS-CSHHHHHHHHHTTT-TTCHHHHHHHHHHHHHHSTTCS-HHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH--hC-hh-hHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHcccCH-HHHHHH
Confidence 3455677777888888888888888876 43 44 22333333443322 3444555555544332211111 111111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHh
Q 024800 87 VKDY-RSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (262)
Q Consensus 87 i~~y-r~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~ 165 (262)
..-| +..--++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+++
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-- 444 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-- 444 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH--
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh--
Confidence 1111 1111122233333333322 222111111112222333332100 011 245688888888764
Q ss_pred hcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 166 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.|.+| ....+.+..+. -.|+.++|+...+++++
T Consensus 445 ---~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~ 477 (514)
T 2gw1_A 445 ---DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESAD 477 (514)
T ss_dssp ---CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ---CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 34444 33344455444 47999999988777765
No 52
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=76.96 E-value=25 Score=27.56 Aligned_cols=59 Identities=14% Similarity=0.159 Sum_probs=32.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (262)
+-+..+|.+..+.|+|++++.++++++. .. +. +..-...+..+|-. .+....|...+..
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALE--LD-SS-AATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--cC-Cc-chHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 4455667777777888888888877776 32 32 33333444444432 3344444444443
No 53
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=76.66 E-value=31 Score=28.54 Aligned_cols=168 Identities=13% Similarity=0.115 Sum_probs=87.0
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHHHHH
Q 024800 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (262)
Q Consensus 10 ~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~i~~ 89 (262)
..+|.+....|+|++++..++++++ .. +-+.+-...+..+|-. .+....|...+.......... .........-
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~--~~--~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~ 197 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILE--VC--VWDAELRELRAECFIK-EGEPRKAISDLKAASKLKSDN-TEAFYKISTL 197 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH--HC--TTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCC-HHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH--hC--CCchHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 3447888999999999999999987 33 3445556666666544 455666666665443322111 1111111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhc--------cccchhhhhccccchHHHHHHHHHHHHHHH
Q 024800 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMK--------GDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (262)
Q Consensus 90 yr~-ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~Kmk--------gDyyRYlaE~~~~~~~~~~~e~A~~aY~~A 160 (262)
|.. .=-++-...+..++.+ -|.. +....+|.++. |..+ +..+ -.+.|...|+++
T Consensus 198 ~~~~~~~~~A~~~~~~a~~~-----~~~~--~~~~~~~~~~~~~~~~~~~a~~~-----~~~~-----~~~~A~~~~~~~ 260 (359)
T 3ieg_A 198 YYQLGDHELSLSEVRECLKL-----DQDH--KRCFAHYKQVKKLNKLIESAEEL-----IRDG-----RYTDATSKYESV 260 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHHH-----CTTC--HHHHHHHHHHHHHHHHHHHHHHH-----HHTT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhh-----Cccc--hHHHHHHHHHHHHHHHHHHHHHH-----HHcC-----CHHHHHHHHHHH
Confidence 111 1111222233333321 2321 22222222211 2221 1111 135678888888
Q ss_pred HHHHhhcCCCCCchhHh-HhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 161 QDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 161 ~~~a~~~L~pt~PirLg-LaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
++. .|.+|.... +..+.+..++. .|+.++|+...+++++.
T Consensus 261 ~~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 261 MKT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred Hhc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 764 355665433 44455655554 89999999988887763
No 54
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=76.54 E-value=8.1 Score=28.56 Aligned_cols=52 Identities=6% Similarity=-0.017 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 204 (262)
+.|.+.|++|+++.. +.++.++.+-....|.+..+ .-+|+.++|++.-++|+
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 568999999999875 34545444333444555554 45899999998655544
No 55
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=76.30 E-value=13 Score=29.04 Aligned_cols=49 Identities=24% Similarity=0.169 Sum_probs=38.9
Q ss_pred cCHHHHHHHHHHHhhc-cCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 024800 20 ERYEEMVKFMDSLVTS-STPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (262)
Q Consensus 20 eRy~Dm~~~mk~~i~~-~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 69 (262)
+|.|..++++|.-+.. -+| ++||.|-|.=|.--.|...-.-|-|.|-+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~-~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTG-GGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCS-SBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6778888888765532 156 999999999999999988888888888774
No 56
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=76.15 E-value=35 Score=28.93 Aligned_cols=59 Identities=10% Similarity=0.043 Sum_probs=42.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (262)
+.++.++....+.|+|++++.++++++. .. |. +.+=...+..+|-. .+....|...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAIL--QD-PG-DAEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHH--hC-cC-CHHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 4578889999999999999999999997 33 43 45556666666654 3555666666654
No 57
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=75.46 E-value=31 Score=28.00 Aligned_cols=65 Identities=12% Similarity=0.089 Sum_probs=46.7
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCC--CHHHHHHHHHHHhhhhhhhhhHHHHHHHHhh
Q 024800 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATEL--TVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (262)
Q Consensus 5 ~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~L--s~eERnLls~ayKn~i~~~R~s~R~l~~ieq 73 (262)
.-+.+..+|...-+.|+|++++..+++++. .. |.- ..+=...+..+|-. .+....|...+.....
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~--~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFT--YG-RTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQ 80 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGG--GC-SCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--hC-CCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 456788999999999999999999999997 33 332 25555666666643 4666777777765444
No 58
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=74.88 E-value=33 Score=28.04 Aligned_cols=60 Identities=10% Similarity=-0.024 Sum_probs=42.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~i 71 (262)
+.++.+|...-+.|+|++++.+++++++ .. |. +.+-...+..+|-. .+....|...+...
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a 81 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQ--AA-PE-REEAWRSLGLTQAE-NEKDGLAIIALNHA 81 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHH--hC-CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 4568889999999999999999999987 33 43 45555566666554 35556666666543
No 59
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.57 E-value=43 Score=29.13 Aligned_cols=58 Identities=14% Similarity=-0.043 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
-++|...|++|..++.. .+ ..|.-.|...+...-+|...++.++|+..-.++|+..-.
T Consensus 191 ~~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 191 LAKSKASLTAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 35689999999998853 43 233444666666666777789999999988888876543
No 60
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=74.52 E-value=6.8 Score=34.87 Aligned_cols=54 Identities=11% Similarity=0.144 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHhhc-CCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTD-LAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~-L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|.++|++|+++.+.. ....||-.+...-|.+.-|+. +|+.++|...-+++..
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 66999999999998643 345677777777788877776 7999999877666543
No 61
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=74.30 E-value=52 Score=29.97 Aligned_cols=55 Identities=9% Similarity=0.004 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
.+.|.+.|++|+++... . +.+|-....+++.-.-.|...|+.++|+...+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46789999999987643 2 3455543333333334444589999999988888753
No 62
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=74.11 E-value=9.2 Score=26.25 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 204 (262)
+.|.+.|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|+
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5688899999865 44554 344566666665 799999988766655
No 63
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=74.07 E-value=42 Score=28.84 Aligned_cols=182 Identities=14% Similarity=0.025 Sum_probs=89.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcc--CCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccch----
Q 024800 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSS--TPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNE---- 81 (262)
Q Consensus 8 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~--~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~---- 81 (262)
-+..++.+....|+|++++.++++.++.. .+.......=...+..+|- ..+....|...+..........++.
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 166 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEG 166 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHH
Confidence 35578888888999999999999887632 1101111112223333332 2344444444443221111000110
Q ss_pred -hhhHHHHHHHHH-H-----------------HHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccc
Q 024800 82 -EHVSLVKDYRSK-V-----------------ESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKV 142 (262)
Q Consensus 82 -~~~~~i~~yr~k-i-----------------~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~ 142 (262)
....+..-|... - -++-...+.+.+.+.... .+.......+...|..|...-.
T Consensus 167 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~--- 238 (411)
T 4a1s_A 167 RALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD--- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC---
Confidence 011111111111 0 234444555555554432 1112233333445555433221
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 024800 143 GDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (262)
Q Consensus 143 ~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 208 (262)
.+.|...|++|++++... .++...+.+++.-...|-..|+.++|+...++|++.+-
T Consensus 239 -------~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 -------FQAAIEHHQERLRIAREF---GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp -------HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 356888999999888641 12333343444333444457999999998888877654
No 64
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=73.42 E-value=19 Score=25.33 Aligned_cols=49 Identities=14% Similarity=0.023 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
.+.|...|++|+.+ .|.+| ....+.+..+.. +|+.++|+...++|+...
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhc
Confidence 35688899998864 34443 234555655554 799999999888777654
No 65
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=73.38 E-value=12 Score=31.41 Aligned_cols=189 Identities=15% Similarity=0.093 Sum_probs=90.3
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-----hhhhhhhhhHHHHHHH-Hhhhhhcccc
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAY-----KNVIGSLRAAWRIISS-IEQKEEGRKN 80 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ay-----Kn~i~~~R~s~R~l~~-ieq~e~~~~~ 80 (262)
+.+...+...-..|+|+++++..++.++ .. +. ..+....+..-+ -...+..-.|...+.. ++........
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~--~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 151 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELK--KE-EY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--TC-CC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhc--cc-cC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch
Confidence 3445666777778999999999999887 33 33 433322222111 1112233445554432 2111111100
Q ss_pred hhhh----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHH
Q 024800 81 EEHV----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (262)
Q Consensus 81 ~~~~----~~i~~yr-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~ 155 (262)
.... .+..-|. ..=-++-....+..+.+.+. .|.. ....+..+-..|..|...-+ -+.|.+
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~~--~~~~~~~~~nlg~~y~~~~~----------y~~Al~ 217 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHDN--EEFDVKVRYNHAKALYLDSR----------YEESLY 217 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCCC--HHHHHHHHHHHHHHHHHTTC----------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCcc--ccchHHHHHhHHHHHHHHhh----------HHHHHH
Confidence 0000 1111111 11112344555566655543 2221 11111122234444432211 367999
Q ss_pred HHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCch
Q 024800 156 SYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESY 219 (262)
Q Consensus 156 aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~~ 219 (262)
.|++|++++.. ..++..++.+++.--..|.-+|+.++|+. ..|+.|+.-.+.++...+
T Consensus 218 ~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~---~~~~~Al~~~~~~~~~~~ 275 (293)
T 2qfc_A 218 QVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIE---DAYKKASFFFDILEMHAY 275 (293)
T ss_dssp HHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHH---HHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHH---HHHHHHHHHHHHhCcHhh
Confidence 99999999853 23444556555554455556899999942 334444444444555544
No 66
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=73.05 E-value=42 Score=28.41 Aligned_cols=60 Identities=13% Similarity=0.227 Sum_probs=40.9
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 024800 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (262)
Q Consensus 6 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (262)
-+-+..++.+..+.|+|++++.++++.++ .. |. +.+-...+..+|.. .+....|...+..
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 158 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCLE--LQ-PN-NLKALMALAVSYTN-TSHQQDACEALKN 158 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh--cC-CC-CHHHHHHHHHHHHc-cccHHHHHHHHHH
Confidence 34567888999999999999999999997 43 33 34555556665543 3445555555543
No 67
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=72.73 E-value=12 Score=28.63 Aligned_cols=55 Identities=7% Similarity=0.007 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
+.|...|++|+.+++ ..+ .+|...+.+++.--..|-.+|+.++|....++|++-+
T Consensus 83 ~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 83 DAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 568999999999986 343 2454445444444444445899999999999988754
No 68
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=72.20 E-value=15 Score=24.14 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 5688899998864 34443 344566666554 7999999987777665
No 69
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=71.51 E-value=13 Score=31.95 Aligned_cols=55 Identities=11% Similarity=0.042 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....++++-
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 56888999999988755555566666666667777666 69999999888887654
No 70
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=71.31 E-value=35 Score=26.66 Aligned_cols=60 Identities=7% Similarity=-0.053 Sum_probs=26.1
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~i 71 (262)
..+..+|...-+.|+|++++.+++++++ .. | -+.+-...+..+|- ..+....|...+...
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~--~~-~-~~~~~~~~la~~~~-~~~~~~~A~~~~~~~ 83 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIE--EN-K-EDAIPYINFANLLS-SVNELERALAFYDKA 83 (243)
T ss_dssp ------------------CCTTHHHHHT--TC-T-TCHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHH--hC-c-ccHHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 3456778888889999999999999987 33 3 34555555555554 345556666666543
No 71
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.09 E-value=11 Score=27.09 Aligned_cols=49 Identities=27% Similarity=0.214 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|.+.|++|++ +.|.+|.......+.+..++. +|+.++|+...++++.
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 457777777763 456666656666777776655 6888888888777765
No 72
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=70.96 E-value=33 Score=26.26 Aligned_cols=166 Identities=10% Similarity=-0.051 Sum_probs=84.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~ 86 (262)
+-+..++.+....|+|++++.+++++++ .. |. +.+-...+..+|-. .+....+...+....+..... .......
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~-~~~~~~l 82 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALK--SD-PK-NELAWLVRAEIYQY-LKVNDKAQESFRQALSIKPDS-AEINNNY 82 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH--hC-cc-chHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCC-hHHHHHH
Confidence 4456788889999999999999999987 33 33 34555555555543 355556666654433221111 0111111
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHH
Q 024800 87 VKDYRSK--VESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIA 164 (262)
Q Consensus 87 i~~yr~k--i~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a 164 (262)
..-|... =-++-...+..++. .|. .+. ....+...|..|... ++ .+.|...|+++++.
T Consensus 83 ~~~~~~~~~~~~~A~~~~~~~~~------~~~--~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~- 142 (225)
T 2vq2_A 83 GWFLCGRLNRPAESMAYFDKALA------DPT--YPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAA- 142 (225)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHT------STT--CSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHhcCcHHHHHHHHHHHHc------CcC--Ccc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-
Confidence 1111111 01122222223222 121 111 122223445544322 11 35678888888764
Q ss_pred hhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 165 LTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 165 ~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
.|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 143 ----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 143 ----QPQFP---PAFKELARTKML-AGQLGDADYYFKKYQSR 176 (225)
T ss_dssp ----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred ----CCCCc---hHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 34443 233444544444 79999999888877653
No 73
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=70.87 E-value=46 Score=27.92 Aligned_cols=59 Identities=12% Similarity=-0.000 Sum_probs=41.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (262)
+.+..++.+..+.|+|++++.++.++++ .. |. +.+=...+..+|.. .+....|...+..
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 123 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQ--QD-PK-HMEAWQYLGTTQAE-NEQELLAISALRR 123 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHH--SC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH--hC-CC-CHHHHHHHHHHHHH-CcCHHHHHHHHHH
Confidence 4577899999999999999999999998 43 33 45555666666543 3444555555543
No 74
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=70.74 E-value=38 Score=26.97 Aligned_cols=29 Identities=17% Similarity=0.261 Sum_probs=18.9
Q ss_pred HhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 176 LGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 176 LgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
....++.+..++. +|+.++|+...++++.
T Consensus 215 ~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 215 SETNFYLGKYYLS-LGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 3444555555554 7999998887776653
No 75
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=70.74 E-value=14 Score=26.33 Aligned_cols=47 Identities=15% Similarity=0.261 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
+.|...|++|+++ .|.+ .....|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5688899988864 4455 3456667776665 79999999988887754
No 76
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=70.63 E-value=20 Score=25.27 Aligned_cols=49 Identities=16% Similarity=0.145 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++++. +.|.+|......++.+..++. +|+.++|+..-++++.
T Consensus 56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 568888888875 356776655566666666664 7999999887666554
No 77
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=69.74 E-value=41 Score=26.85 Aligned_cols=47 Identities=19% Similarity=0.155 Sum_probs=34.4
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhh
Q 024800 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKN 56 (262)
Q Consensus 6 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn 56 (262)
-+-+..++.+..+.|++++++..+++.++ .+ |. +.+=...+..+|..
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~--~~-P~-~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVA--RT-PR-YLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CC-cHHHHHHHHHHHHH
Confidence 34567789999999999999999999998 43 44 44455555555543
No 78
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=69.55 E-value=22 Score=26.81 Aligned_cols=46 Identities=11% Similarity=0.102 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++++.
T Consensus 62 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKYS---KAWSRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4466666666543 23332 334455555444 6777777766555544
No 79
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=69.44 E-value=92 Score=30.80 Aligned_cols=167 Identities=14% Similarity=0.154 Sum_probs=84.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH-HhhhhhcccchhhhH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS-IEQKEEGRKNEEHVS 85 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~-ieq~e~~~~~~~~~~ 85 (262)
+-+..++.+..+.|+|++++.+.++.++ .+ |+. .+=.+-|..+|.. .+..-.|...+.. ++-+... ......
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~--l~-P~~-~~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~~--~~a~~n 82 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALE--VF-PEF-AAAHSNLASVLQQ-QGKLQEALMHYKEAIRISPTF--ADAYSN 82 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-SCC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC--HHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCC--HHHHHH
Confidence 4567789999999999999999999998 44 554 4445556666654 2444444444432 2211110 001111
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHH
Q 024800 86 LVKDYR--SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDI 163 (262)
Q Consensus 86 ~i~~yr--~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~ 163 (262)
+-.-|. .+. ++-...++..+.+ -|.. ..+++ ..|..|+-+ | -.++|.++|++|+++
T Consensus 83 Lg~~l~~~g~~-~~A~~~~~kAl~l-----~P~~----~~a~~--~Lg~~~~~~-----g-----~~~eAi~~~~~Al~l 140 (723)
T 4gyw_A 83 MGNTLKEMQDV-QGALQCYTRAIQI-----NPAF----ADAHS--NLASIHKDS-----G-----NIPEAIASYRTALKL 140 (723)
T ss_dssp HHHHHHHTTCH-HHHHHHHHHHHHH-----CTTC----HHHHH--HHHHHHHHT-----T-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCH-HHHHHHHHHHHHh-----CCCC----HHHHH--HHHHHHHHc-----C-----CHHHHHHHHHHHHHh
Confidence 111111 011 1112222233322 2321 11221 223333221 1 145688888888864
Q ss_pred HhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhh
Q 024800 164 ALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAEL 211 (262)
Q Consensus 164 a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~l 211 (262)
.|.+|- ...|.+.. |..+|+.++|++..+++.+-.-..+
T Consensus 141 -----~P~~~~---a~~~L~~~-l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 -----KPDFPD---AYCNLAHC-LQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp -----CSCCHH---HHHHHHHH-HHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred -----CCCChH---HHhhhhhH-HHhcccHHHHHHHHHHHHHhChhHH
Confidence 455542 33344433 3457888888888887776555443
No 80
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=69.22 E-value=17 Score=24.42 Aligned_cols=46 Identities=15% Similarity=0.156 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+++ .|.+ .....+.+..++. +|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 5688889988864 2333 3345666766665 7999999887776654
No 81
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=68.55 E-value=47 Score=27.13 Aligned_cols=56 Identities=13% Similarity=-0.093 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCC-chhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTH-PIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~-PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
.+.|...|++|+.+....-.+.+ |-......+.+..++ .+|+.++|+...++++..
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 35689999999998854333222 333334555666555 479999999988887753
No 82
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=68.19 E-value=41 Score=26.32 Aligned_cols=28 Identities=4% Similarity=0.231 Sum_probs=24.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
.-+..++.+....|+|++++.++++.+.
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 3456788899999999999999999987
No 83
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=67.36 E-value=43 Score=26.21 Aligned_cols=46 Identities=22% Similarity=0.132 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 156 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 156 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 201 (258)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcccH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4566777777653 23333 333444444443 6777777776666654
No 84
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=67.25 E-value=50 Score=26.92 Aligned_cols=60 Identities=12% Similarity=0.053 Sum_probs=40.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~i 71 (262)
.-+..++.+..+.|+|++++.+++++++ .. |. +.+-...+..+|. ..+....|.+.+...
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~--~~-~~-~~~~~~~la~~~~-~~~~~~~A~~~~~~~ 115 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARM--LD-PK-DIAVHAALAVSHT-NEHNANAALASLRAW 115 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh--cC-cC-CHHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 4556788899999999999999999987 33 33 3444555555553 345556666666543
No 85
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=67.15 E-value=21 Score=24.10 Aligned_cols=47 Identities=19% Similarity=0.148 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++|+.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 5678888888753 4555421 45566666665 7999999887766654
No 86
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=67.01 E-value=25 Score=24.76 Aligned_cols=49 Identities=10% Similarity=0.074 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...+++++
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 457777777764 357788655566666666665 7999999988877765
No 87
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=65.03 E-value=68 Score=27.68 Aligned_cols=54 Identities=7% Similarity=0.162 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
-+.|.+.|++|+++++..- +|.......|.+..++. +|+.++|+...++|+.-+
T Consensus 238 ~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 4678999999999987543 34444445555655554 799999998877776543
No 88
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=64.34 E-value=23 Score=25.22 Aligned_cols=46 Identities=22% Similarity=0.132 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+++ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4577777777754 34443 344555555554 6888888877777654
No 89
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=63.91 E-value=22 Score=26.14 Aligned_cols=47 Identities=6% Similarity=-0.007 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|.+.|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 35688899999864 45554 344555665554 8999999876665543
No 90
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=63.41 E-value=26 Score=28.23 Aligned_cols=54 Identities=17% Similarity=0.198 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHh-----HhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-----LALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLg-----LaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
-+.|..+|++|+++.-. .|+..++.+. .-.|-+.-+.. +|+.++|+.-+.+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 36699999999998743 3322333333 66666665555 7999999988777765
No 91
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=62.36 E-value=27 Score=24.33 Aligned_cols=46 Identities=11% Similarity=0.085 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|.+.|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 5678888888864 33443 344556655554 7999999887777664
No 92
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=61.50 E-value=19 Score=20.91 Aligned_cols=26 Identities=23% Similarity=0.461 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 024800 85 SLVKDYRSKVESELSDVCGSILKLLD 110 (262)
Q Consensus 85 ~~i~~yr~ki~~EL~~~C~eii~lId 110 (262)
+.++.||.+|.+.|..+.+.|-.++.
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 56788999999999999999877764
No 93
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=61.34 E-value=15 Score=26.20 Aligned_cols=50 Identities=12% Similarity=0.050 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
+.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++|+..
T Consensus 7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 347788888875 334467777777888887776 79999999988887653
No 94
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=61.21 E-value=35 Score=25.03 Aligned_cols=48 Identities=17% Similarity=0.096 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++.-.
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5689999999864 466664 34566666554 799999998777776543
No 95
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=60.97 E-value=28 Score=24.75 Aligned_cols=46 Identities=20% Similarity=0.241 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++.
T Consensus 26 ~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 71 (137)
T 3q49_B 26 PEAAACYGRAITR-----NPLVA---VYYTNRALCYLK-MQQPEQALADCRRALE 71 (137)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CcCcH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 3456666666543 23332 233344444433 5666666665555543
No 96
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=60.67 E-value=31 Score=37.72 Aligned_cols=24 Identities=25% Similarity=0.216 Sum_probs=20.3
Q ss_pred hHHHHHHHHhCCHHHHHHHHHHHH
Q 024800 181 NFSVFYYEILNSSEKACTMAKQAF 204 (262)
Q Consensus 181 N~SVF~yEi~~~~~~A~~iAk~af 204 (262)
.-.+-+|+-.|..++|+.+..+|+
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHh
Confidence 355678899999999999999983
No 97
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=60.37 E-value=31 Score=23.73 Aligned_cols=50 Identities=20% Similarity=0.349 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 208 (262)
.+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...+++++..-
T Consensus 20 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 20 FDTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 35688888888765 24443 344566666655 7999999999888877653
No 98
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=60.17 E-value=30 Score=24.54 Aligned_cols=48 Identities=8% Similarity=0.015 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 5688899999865 34443 344555555554 799999998888877654
No 99
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=60.11 E-value=26 Score=26.57 Aligned_cols=46 Identities=15% Similarity=0.244 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|.++|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5688999999864 45554 233444444444 7888888887777644
No 100
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=59.55 E-value=81 Score=26.71 Aligned_cols=111 Identities=19% Similarity=0.286 Sum_probs=63.9
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHHHHHHH
Q 024800 12 LAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYR 91 (262)
Q Consensus 12 ~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~i~~yr 91 (262)
.|+|.+...+|--||+-+|.-.. +..|..|.=.-||=-+.. ++.+ ++.+.++..=+..-
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~--------nf~e~RLiYDHYKlKvdE----------LEK~---~KdSeKI~RNQsKL 158 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK--------ETDKYRERYDHYKVKLDN----------LEKK---NKDQERIERNQQKF 158 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH----------HHHH---TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHhHHH----------HHhc---cchHHHHHHhHHHh
Confidence 57778877778777777754331 133555665666654443 2332 12223332222233
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhh
Q 024800 92 SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (262)
Q Consensus 92 ~ki~~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~ 166 (262)
.+-+.--..+|-|+|+-.+ ++-|.|+|.++|..+. +=...--|-+|++.|..
T Consensus 159 ssAEtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 159 KDAEAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred hhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 3444455667777776665 4568888999886553 22344568888888754
No 101
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=58.49 E-value=43 Score=23.18 Aligned_cols=72 Identities=15% Similarity=0.108 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLR 230 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~~~ds~~IlqLLr 230 (262)
+.|...|++|+++ .|.+|. ...+.+..|+ .+|+.++|+...++|+.-+-.. ....-...+.++|+
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHHH
Confidence 5688899988864 344443 4455565554 4899999999888887765332 12333455566666
Q ss_pred hhHhhhh
Q 024800 231 DNLTLWT 237 (262)
Q Consensus 231 dNl~~W~ 237 (262)
..=..|.
T Consensus 89 ~~~~~~~ 95 (100)
T 3ma5_A 89 KAEGLEH 95 (100)
T ss_dssp HHHTTC-
T ss_pred Hcccccc
Confidence 5544443
No 102
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=58.43 E-value=83 Score=26.48 Aligned_cols=52 Identities=8% Similarity=-0.051 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 204 (262)
-+.|...|++|+.+.... +. +| ..+.++.-....|-.+|+.++|+...++++
T Consensus 171 ~~~A~~~~~~al~~~~~~-~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKEM-EN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHT-TC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc-CC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 356899999999988642 22 22 333233333444555799999988665554
No 103
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=57.37 E-value=29 Score=26.17 Aligned_cols=46 Identities=13% Similarity=0.039 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|..+|++|+.+ .|.+|. ..+|.++.|.. +|+.++|+...++|+.
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5689999999864 466653 34666666665 7999999876666544
No 104
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=57.16 E-value=31 Score=29.00 Aligned_cols=53 Identities=13% Similarity=-0.022 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
+.|.++|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5689999999998753 32 45555556655555666689999999988887654
No 105
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=57.10 E-value=32 Score=23.12 Aligned_cols=45 Identities=13% Similarity=0.008 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 204 (262)
+.|...|++|+++ .|.+| ....+.+..++ .+|+.++|+...++++
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHH
Confidence 5578888888764 34443 34456665554 4799999988766654
No 106
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=57.05 E-value=13 Score=33.42 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHhhc--------CCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTD--------LAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~--------L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+++.... ....+|....+.+|.+..|+. +|+.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 56888999998865431 111567777888888888875 7999999998888765
No 107
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=56.83 E-value=73 Score=25.34 Aligned_cols=27 Identities=15% Similarity=0.224 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 8 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
.++.+|...-+.|+|++++.+.+++++
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~ 31 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEA 31 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 445555555566666666666666555
No 108
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=56.27 E-value=40 Score=23.01 Aligned_cols=47 Identities=19% Similarity=0.113 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
+.|.+.|++|+.. .|.+| ....+.+..++ .+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5688888888764 34443 23445555554 479999998877776643
No 109
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=56.14 E-value=42 Score=22.46 Aligned_cols=47 Identities=19% Similarity=0.213 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5678888888764 34443 344555555554 79999999988887653
No 110
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=55.88 E-value=41 Score=22.96 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 29 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-----NPANA---VYFCNRAAAYSK-LGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCCH---HHHHHHHHHHHH-hhchHHHHHHHHHHHhc
Confidence 5678888888764 23333 334455555554 79999999998888763
No 111
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=54.40 E-value=40 Score=24.52 Aligned_cols=46 Identities=7% Similarity=-0.135 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|.+.|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5678888888865 34443 344555655554 7999999988777764
No 112
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=54.33 E-value=36 Score=26.39 Aligned_cols=49 Identities=22% Similarity=0.329 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc-------------hhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHP-------------IRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~P-------------irLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+...++|+.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 45788888887644 3343 123456667776665 7999999988887765
No 113
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=54.01 E-value=20 Score=25.65 Aligned_cols=32 Identities=13% Similarity=0.076 Sum_probs=24.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCC
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATE 41 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~ 41 (262)
.-+++++.++.+.|+|++++.+..++.+ .+ |+
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~--~~-p~ 75 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLD--SN-DP 75 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT--CC-CT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh--hC-CC
Confidence 3567788888888888888888888886 44 55
No 114
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=53.02 E-value=26 Score=27.15 Aligned_cols=47 Identities=11% Similarity=0.015 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
-+.|..+|++|+.+ .|.+|. ...|.++.|.. +|+.++|+..-++|+.
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35689999999864 466663 45566766664 8999999876655554
No 115
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=52.74 E-value=42 Score=25.20 Aligned_cols=46 Identities=11% Similarity=0.144 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|.+.|++|+++ .|.||- ...+.+..|. -+|+.++|+..-++|++
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5688899999864 455552 3344454444 47999999887666654
No 116
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.57 E-value=45 Score=23.65 Aligned_cols=46 Identities=9% Similarity=-0.050 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5678888888765 34443 334555665554 7999999887766654
No 117
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=52.52 E-value=1.2e+02 Score=26.75 Aligned_cols=54 Identities=11% Similarity=0.076 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhh--cCCCCCch---hHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 152 NTMLSYKAAQDIALT--DLAPTHPI---RLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 152 ~A~~aY~~A~~~a~~--~L~pt~Pi---rLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 344455555554432 45666653 2455555555566668999999998888765
No 118
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=51.73 E-value=52 Score=22.16 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|.+.|++|+.. .|.+| ....+.+..++. .|+.++|+...+++++
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 5577888888754 23333 233445555444 6899998888777664
No 119
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=51.46 E-value=1.1e+02 Score=25.73 Aligned_cols=54 Identities=9% Similarity=-0.024 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchh-HhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~Pir-LgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 207 (262)
.+.|...|++|+++... . .+|.. .....|.+.+|.. +|+.++|+...++|+.-.
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 36689999999998864 2 12333 3345566766665 799999999888887654
No 120
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=51.44 E-value=35 Score=29.06 Aligned_cols=73 Identities=16% Similarity=0.121 Sum_probs=44.3
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024800 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (262)
Q Consensus 40 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~L 113 (262)
|+||.|-|.=|....|...-.-|-|.|.+..--.+.- ++-...-.+-++-.++.++++..+.++.+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~l-Kk~~K~~~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDL-KKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999888888888752111100 000000011134445666666666666666666543
No 121
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=51.16 E-value=48 Score=24.01 Aligned_cols=48 Identities=25% Similarity=0.177 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
.+.|...|++|+.+ .|.+ .....+.+..++. +|+.++|+...++++..
T Consensus 29 ~~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 29 YENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLR-TECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35688888888864 2333 3445556665554 79999999988887753
No 122
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=50.40 E-value=69 Score=25.38 Aligned_cols=47 Identities=13% Similarity=0.105 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 35677788887764 34443 233444444444 7999999888877765
No 123
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=50.10 E-value=48 Score=24.94 Aligned_cols=46 Identities=7% Similarity=0.011 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 5678888888864 34444 445566666665 7999998887666553
No 124
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=49.73 E-value=29 Score=31.79 Aligned_cols=54 Identities=17% Similarity=0.194 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHhhcCC--------CCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLA--------PTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~--------pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
-+.|...|++|+.+... .+ ..+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 284 ~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 284 YMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 35688899999876531 11 0235667788888888876 7999999998888754
No 125
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=49.49 E-value=57 Score=21.95 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++++.. .|.+| ....+.+..++. .|+.++|....+++++
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 5578888888764 34443 334556666654 7999999887776654
No 126
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=48.61 E-value=17 Score=31.74 Aligned_cols=54 Identities=20% Similarity=0.284 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhhcC-------CCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDL-------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L-------~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|..+|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 557778888776542110 00124455666777776665 6888888777776654
No 127
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=48.56 E-value=50 Score=25.56 Aligned_cols=46 Identities=11% Similarity=-0.046 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+ .|.+| ...++.+..++. +|+.++|+...++|+.
T Consensus 105 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNNV---KALYKLGVANMY-FGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5688888888875 34443 445566666554 7999999887766654
No 128
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=48.32 E-value=50 Score=25.40 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|.+.|++|+.+ .|.+| ....|.+..++. +|+.++|+...+++++
T Consensus 54 ~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5688899999875 24443 445666666665 7999999998888876
No 129
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=47.51 E-value=78 Score=22.96 Aligned_cols=58 Identities=17% Similarity=0.246 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 024800 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (262)
Q Consensus 8 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (262)
-+..++.+..+.|+|++++..+++++. .. +. +..-...+..+|- ..+....|...+..
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~~~~~~~-~~~~~~~A~~~~~~ 67 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYD--AD-AF-DVDVALHLGIAYV-KTGAVDRGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCC--TT-SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHH--hC-cc-ChHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 345678888889999999999998876 33 32 3343444444443 23444555555543
No 130
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=47.26 E-value=28 Score=24.18 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+. +.|.+ .....+.+..++. .|+.++|+...++++.
T Consensus 33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYTK-LLEFQLALKDCEECIQ 78 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHTT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 457888888874 34444 3344555655544 7999999998888775
No 131
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=46.89 E-value=52 Score=25.98 Aligned_cols=29 Identities=10% Similarity=0.174 Sum_probs=25.7
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 6 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
-+.++..+...-+.|+|++++.++.+.+.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIA 32 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 46778889888899999999999999987
No 132
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=46.88 E-value=1.1e+02 Score=24.53 Aligned_cols=63 Identities=21% Similarity=0.146 Sum_probs=45.0
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhh---------hhhhhhHHHHHHHHhh
Q 024800 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNV---------IGSLRAAWRIISSIEQ 73 (262)
Q Consensus 10 ~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~---------i~~~R~s~R~l~~ieq 73 (262)
..+|.+..+.|+|++++..++++++.. .+.....+-...+..+|.+. .+....|...+..+..
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAY-PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHC-CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 678999999999999999999999732 11334566677778888755 2555666666655443
No 133
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=45.52 E-value=55 Score=27.18 Aligned_cols=72 Identities=18% Similarity=0.217 Sum_probs=43.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 024800 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (262)
Q Consensus 40 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~ 112 (262)
|+||.|-|.=|....|...-.-|.+.|.+..--.+.- ++.......-++-.++.++++..+.+..+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKI-KEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEV 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999998888888888742111000 00000001123444556666666666666666654
No 134
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=44.99 E-value=44 Score=30.90 Aligned_cols=15 Identities=13% Similarity=-0.028 Sum_probs=7.5
Q ss_pred hCCHHHHHHHHHHHH
Q 024800 190 LNSSEKACTMAKQAF 204 (262)
Q Consensus 190 ~~~~~~A~~iAk~af 204 (262)
+|+.++|+...++|+
T Consensus 87 ~g~~~eA~~~~~~al 101 (477)
T 1wao_1 87 LGKFRAALRDYETVV 101 (477)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 455555555444443
No 135
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=44.36 E-value=70 Score=23.25 Aligned_cols=47 Identities=13% Similarity=0.057 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
+.|.+.|+++... .|.+| ....+.+..++ ..|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALD-NLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHH-HcCcHHHHHHHHHHHHhc
Confidence 4577888888764 33343 33455555554 479999999988887654
No 136
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=44.20 E-value=81 Score=22.20 Aligned_cols=53 Identities=17% Similarity=0.040 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
..|..-|++|+......-. ..+.+-.+..++++-+| .+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 4577888888877642211 12334444455555555 58999999998888764
No 137
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=43.78 E-value=58 Score=27.06 Aligned_cols=72 Identities=14% Similarity=0.179 Sum_probs=42.9
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 024800 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (262)
Q Consensus 40 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~ 112 (262)
|+||.|-|.=|....|...-.-|.+.|.+..--.+.- ++......+-++-.++.++++..+.+..+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKV-KALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAA 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999998888888888742111000 00000001123444455666666666666666554
No 138
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=43.63 E-value=75 Score=26.35 Aligned_cols=70 Identities=14% Similarity=0.177 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024800 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (262)
Q Consensus 40 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~L 113 (262)
|+||.|-|.=|....|...-.-|-|.|.+..--.+.- ++.. +.-++-.++.++++..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMI-EELE---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHST---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhc---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999888999888852111110 0000 02244555666777777777766666543
No 139
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=43.21 E-value=69 Score=24.56 Aligned_cols=46 Identities=11% Similarity=0.071 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+ .|.||- .-.|.+..++. +|+.++|+..-++|+.
T Consensus 53 ~eA~~~~~~al~~-----~P~~~~---~~~~lg~~~~~-~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 53 EEAEVFFRFLCIY-----DFYNVD---YIMGLAAIYQI-KEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 5688888888753 566654 34555655554 7999999987666543
No 140
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=43.01 E-value=61 Score=26.90 Aligned_cols=72 Identities=19% Similarity=0.159 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 024800 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (262)
Q Consensus 40 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~ 112 (262)
|+||.|-|.=|....|...-.-|-+.|.+..--.+.- ++.......-++-.++.++++..+.+..+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDL-KALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEV 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999998888888888842111000 00000001123444456666666666666666554
No 141
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=42.73 E-value=40 Score=27.10 Aligned_cols=95 Identities=17% Similarity=0.191 Sum_probs=57.3
Q ss_pred ccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hhHhHhhhHHHHH----HHHhCCHHHHHHHHHH
Q 024800 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHP---IRLGLALNFSVFY----YEILNSSEKACTMAKQ 202 (262)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~P---irLgLaLN~SVF~----yEi~~~~~~A~~iAk~ 202 (262)
.|.-+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---++ -+-.++.++|++
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~---- 112 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ---- 112 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----
Confidence 4555555666777777777889999999999864 45554 3455554322121 011245566655
Q ss_pred HHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhc
Q 024800 203 AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 238 (262)
Q Consensus 203 afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~ 238 (262)
+|+.|++. +.+ +.+...-+++..++-.+|..
T Consensus 113 ~~~kAl~l----~P~-~~~y~~al~~~~ka~el~~~ 143 (158)
T 1zu2_A 113 FFQQAVDE----QPD-NTHYLKSLEMTAKAPQLHAE 143 (158)
T ss_dssp HHHHHHHH----CTT-CHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHh----CCC-CHHHHHHHHHHHhCHhccCc
Confidence 66666652 222 34556667777888887764
No 142
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=42.42 E-value=1.2e+02 Score=23.69 Aligned_cols=63 Identities=8% Similarity=-0.042 Sum_probs=43.2
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhh
Q 024800 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (262)
Q Consensus 6 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq 73 (262)
.+-+..+|.+..+.|+|++++++++++++ .. +. +..-...+..+|-. .+....|.+.+.....
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~--~~-~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALA--SD-SR-NARVLNNYGGFLYE-QKRYEEAYQRLLEASQ 133 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HC-cC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHHh
Confidence 34566788999999999999999999987 43 43 44555555555543 4556667666655433
No 143
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=42.26 E-value=39 Score=25.55 Aligned_cols=49 Identities=16% Similarity=0.226 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhh----------------hhhhHHHHHHH
Q 024800 20 ERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG----------------SLRAAWRIISS 70 (262)
Q Consensus 20 eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~----------------~~R~s~R~l~~ 70 (262)
++|+.+++.++.+-. .+...++.+++-.|-.-||.... .+..||..+..
T Consensus 10 ~~F~~A~~~vk~l~~--~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g 74 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPK--NGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGK 74 (106)
T ss_dssp HHHHHHHHHHHHSCS--SCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHhccc--cCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcC
Confidence 678899999988754 22236899999999888988753 25677777643
No 144
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=42.10 E-value=1.3e+02 Score=23.83 Aligned_cols=65 Identities=15% Similarity=0.110 Sum_probs=42.6
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhh
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq 73 (262)
+.+..+|...-+.|+|++++..+++++... ...+...+-...+..+|-. .+....|...+..+.+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRY-PFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 456678888999999999999999999732 1123334555555555533 4556666666665443
No 145
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=41.89 E-value=65 Score=26.72 Aligned_cols=68 Identities=18% Similarity=0.127 Sum_probs=42.3
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhh----hhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 024800 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ----KEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (262)
Q Consensus 40 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq----~e~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~ 112 (262)
|+||.|-|.=|..-.|...-.-|.+.|.+..--. +.+..+ ..-++-.++.++++..+.+..+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDEL 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111 111001 0113444455566666666666555544
No 146
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=41.66 E-value=1.5e+02 Score=24.65 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|...|++|+... .++|.++ ..+-.++..|+.. .|+.+.|..+.++|.+
T Consensus 219 ~~~A~~~~~~al~~~--~l~p~~~--~~l~~~~~~~~~~-~g~~~~a~~~~~~a~~ 269 (308)
T 2ond_A 219 DNNTRVLFERVLTSG--SLPPEKS--GEIWARFLAFESN-IGDLASILKVEKRRFT 269 (308)
T ss_dssp HHHHHHHHHHHHHSS--SSCGGGC--HHHHHHHHHHHHH-HSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--CCCHHHH--HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 456889999987531 3565433 3456677777765 6999998866555543
No 147
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=41.47 E-value=86 Score=30.18 Aligned_cols=65 Identities=22% Similarity=0.014 Sum_probs=42.0
Q ss_pred hhhccccchHHHHHHHHHHHHHHHHHHHhhcCCCC-CchhHhHhhhHHHHHHHH-------------hCCHHHHHHHHHH
Q 024800 137 LAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPT-HPIRLGLALNFSVFYYEI-------------LNSSEKACTMAKQ 202 (262)
Q Consensus 137 laE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt-~PirLgLaLN~SVF~yEi-------------~~~~~~A~~iAk~ 202 (262)
.||....+.-.+++++|.++|++|++..+ ++..| +|--.-..||-| -.||. .|+-++|-.++.+
T Consensus 435 k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~-k~~~tdd~~~v~~~~~~a-k~yE~aGDyy~~AA~k~~yG~~eqAe~l~~~ 512 (526)
T 2wb7_A 435 KAKGMNNENAIEYAQGAIDEYKAAINDLQ-KAAQQDDYQMFLNYLNAA-KKHEMAGDYYVNAARKALNGDLEQAKIDAEK 512 (526)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHH-HHTTCCSHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHH-hhhccCCHHHHHHHHHHh-hhhhhccHHHHHHHHHHhcCccHHHHHHHHH
Confidence 35667777778899999999999999996 45544 443333333333 33665 3555666555555
Q ss_pred H
Q 024800 203 A 203 (262)
Q Consensus 203 a 203 (262)
|
T Consensus 513 A 513 (526)
T 2wb7_A 513 A 513 (526)
T ss_dssp H
T ss_pred H
Confidence 4
No 148
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=41.08 E-value=35 Score=24.72 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|..+|++|+++ .|.+|- ...+.++.+.. .|+.++|+...++++.
T Consensus 67 ~~~A~~~~~~al~l-----~P~~~~---~~~~la~~~~~-~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 67 DGLAIIALNHARML-----DPKDIA---VHAALAVSHTN-EHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35688999999864 455543 34556665554 6888888887766553
No 149
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=40.80 E-value=34 Score=31.40 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhh
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAEL 211 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~l 211 (262)
.+.|...|++|+.. .| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~-----~p----~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK-----VL----HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT-----CC----CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc-----CC----ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 45688888888742 23 2457888888999999999999999999999998753
No 150
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=40.51 E-value=45 Score=28.04 Aligned_cols=49 Identities=12% Similarity=0.015 Sum_probs=28.3
Q ss_pred HHHHHHHHHhh--cCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 024800 156 SYKAAQDIALT--DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (262)
Q Consensus 156 aY~~A~~~a~~--~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 208 (262)
-|++|....+. .+.|.++ ....+.+..|+ -+|+.++|+...++|+.-.-
T Consensus 53 ~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQSV---KAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 35555555543 3444443 34445555544 47888888887777776543
No 151
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=39.81 E-value=51 Score=25.38 Aligned_cols=54 Identities=13% Similarity=-0.018 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhhcC--------CCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDL--------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L--------~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 204 (262)
.+.|.+.|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 3568889999886542100 00334444566777777665 799999988666554
No 152
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=39.65 E-value=87 Score=26.11 Aligned_cols=53 Identities=21% Similarity=-0.155 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEI-LNSSEKACTMAKQAFEE 206 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi-~~~~~~A~~iAk~afd~ 206 (262)
+.|..+|++|+++... . -+|...+-+++----.|.- +|+.++|+..-++|++-
T Consensus 94 ~~A~~~~~~Al~l~~~-~--g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~ 147 (292)
T 1qqe_A 94 VNAVDSLENAIQIFTH-R--GQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEW 147 (292)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 5689999999998853 2 2344444445443334455 59999999988888764
No 153
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=39.51 E-value=58 Score=27.05 Aligned_cols=73 Identities=22% Similarity=0.210 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024800 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (262)
Q Consensus 40 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq~e~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~L 113 (262)
|+||.|-|.=|....|...-.-|-+.|.+..--.+.- ++......+-++-.++.++++..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999998888888888842111100 000000011234455666677776666666666543
No 154
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=39.40 E-value=89 Score=23.29 Aligned_cols=46 Identities=11% Similarity=-0.022 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+. +.|.+|.- ..+.+..++. +|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSRF---FLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHHH---HHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 457778887765 35666533 3455655554 7999999988877754
No 155
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=38.69 E-value=1.2e+02 Score=22.46 Aligned_cols=26 Identities=8% Similarity=0.144 Sum_probs=13.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 9 l~~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
+..++.+..+.|+|++++.++.+.++
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~ 39 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALS 39 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34444444555555555555555544
No 156
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=38.27 E-value=1e+02 Score=21.98 Aligned_cols=47 Identities=13% Similarity=0.044 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|...|++|+.+ .|.+| ..-.+.+..+.. +|+.++|+...++|+.
T Consensus 33 ~~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 33 LAEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35688888888763 44444 333455555554 7999999877666544
No 157
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=38.08 E-value=1e+02 Score=29.24 Aligned_cols=44 Identities=25% Similarity=0.468 Sum_probs=30.2
Q ss_pred ccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hhHhHhhhH------HHHHHH
Q 024800 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHP---IRLGLALNF------SVFYYE 188 (262)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~P---irLgLaLN~------SVF~yE 188 (262)
-||..||.... ..|...|.+|..+. |.+- -.||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~-----P~~G~~~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLV-----PSNGQPYNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHC-----TTBSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhC-----CCCCchHHHHHHHHhcccccHHHHHHHH
Confidence 79999999764 57899999998754 2221 456655443 677663
No 158
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=37.77 E-value=1.1e+02 Score=24.24 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...+++++
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 557777777764 356677555555555555554 7999999987776654
No 159
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=37.58 E-value=92 Score=20.95 Aligned_cols=46 Identities=20% Similarity=0.328 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|+++... .|.+| ....+.+..++ -.|+.++|+...++++.
T Consensus 52 ~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 52 DEAIEYYQKALEL-----DPRSA---EAWYNLGNAYY-KQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCch---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 4577778877654 23333 22334444444 47899999888777665
No 160
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=37.29 E-value=26 Score=26.04 Aligned_cols=60 Identities=12% Similarity=0.221 Sum_probs=38.3
Q ss_pred chhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHh----HhhhHHHHHH
Q 024800 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLG----LALNFSVFYY 187 (262)
Q Consensus 121 eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLg----LaLN~SVF~y 187 (262)
.+.+|+ .|+---|+-.+...-+ .-+..+.+..+.|++-- +..|.||..|+ +.-+|++|+-
T Consensus 5 ~~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 5 PTPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp CCCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 355666 4565557766554322 12455666777777544 36899999998 6667777753
No 161
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=37.19 E-value=1e+02 Score=21.25 Aligned_cols=60 Identities=12% Similarity=0.080 Sum_probs=42.5
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 024800 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (262)
Q Consensus 6 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (262)
-.-+..++.+....|+|++++.++++.+. .+ |. ..+=...+..+|.. .+....|...+..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALD--FD-PT-YSVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH--HC-CC-cHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 34566788999999999999999999997 43 43 34555666666655 4555566665543
No 162
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=37.00 E-value=74 Score=26.71 Aligned_cols=47 Identities=6% Similarity=0.079 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|...|++|++.. |.+ ..+-++++.|+.. .|+.++|+.+-++|+.
T Consensus 185 ~~~A~~~~~~al~~~-----p~~---~~~~~~~~~~~~~-~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 185 KSVAFKIFELGLKKY-----GDI---PEYVLAYIDYLSH-LNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHHHHHHHHHHHHH-----TTC---HHHHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCc---HHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 356888999998753 333 4566888888765 6999998877666654
No 163
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=35.92 E-value=1.1e+02 Score=21.35 Aligned_cols=50 Identities=14% Similarity=0.158 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.-.
T Consensus 60 ~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 60 EQALADCRRALEL-----DGQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CchhH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHChh
Confidence 4578888888864 34443 345556665555 79999999988888876544
No 164
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=35.29 E-value=79 Score=23.55 Aligned_cols=27 Identities=26% Similarity=0.443 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 8 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
-...+|++..+.|+|+++++++++.++
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYIN 59 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 346789999999999999999999998
No 165
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=35.15 E-value=96 Score=23.11 Aligned_cols=48 Identities=17% Similarity=0.288 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCH--HHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSS--EKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~--~~A~~iAk~afd 205 (262)
.+.|..+|++|+.+. |.+| ....+.+..+|.-.|+. ++|+...++++.
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 356889999998764 3443 34556666655557887 999888777665
No 166
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=33.81 E-value=88 Score=24.44 Aligned_cols=46 Identities=7% Similarity=0.056 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|.+.|++|++ +.|. ......+.+..|+. +|+.++|+...++++.
T Consensus 59 ~~A~~~~~~al~-----~~p~---~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 59 KEAADYFDIAIK-----KNYN---LANAYIGKSAAYRD-MKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHHHHHH-----TTCS---HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCcc---hHHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 568888888874 3444 34455566666555 7999999998887765
No 167
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=33.47 E-value=1.1e+02 Score=20.80 Aligned_cols=59 Identities=14% Similarity=0.107 Sum_probs=40.5
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 024800 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (262)
Q Consensus 6 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 69 (262)
-.-+..++.+..+.|+|++++.+++++++ .+ |... .=...+..+|.. .+..-.|...+.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~~~-~a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVE--TD-PDYV-GTYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HS-TTCT-HHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CCcH-HHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 34567889999999999999999999998 44 5543 345556666643 344444444443
No 168
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=32.07 E-value=2.3e+02 Score=23.90 Aligned_cols=28 Identities=14% Similarity=0.302 Sum_probs=19.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
+-+..++.+..+.|+|++++..+++.+.
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~ 95 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALR 95 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3456667777777777777777777765
No 169
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=31.84 E-value=1.5e+02 Score=22.27 Aligned_cols=34 Identities=21% Similarity=0.101 Sum_probs=26.0
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCC
Q 024800 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATEL 42 (262)
Q Consensus 6 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~L 42 (262)
-+-+..++.+..+.|+|++++..+.+++. .+ |..
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~--~~-p~~ 141 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILK--VN-LGA 141 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-TTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHH--hC-ccc
Confidence 34566788888888999999999988887 44 554
No 170
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=31.53 E-value=1.1e+02 Score=26.47 Aligned_cols=46 Identities=11% Similarity=-0.003 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|..+|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 213 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 213 SAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 4578888888764 34443 233455555544 6888888877666654
No 171
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=30.48 E-value=30 Score=28.99 Aligned_cols=37 Identities=32% Similarity=0.532 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 206 (262)
-|.|.++|++|..- .-+ |. .++...+|+.|||.+||.
T Consensus 19 YE~A~~~Ye~a~~n---g~~---pQ--------------~~Kql~KA~NIAKse~dr 55 (199)
T 3ub0_A 19 YEKARADLEEAKKN---DVS---PQ--------------LLKQLTKACNIAKSEFER 55 (199)
T ss_dssp HHHHHHHHHHHHHT---TCC---HH--------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---CCC---HH--------------HHHHHHHHHHHHHHHHhH
Confidence 46788889888532 222 21 357788999999999984
No 172
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=30.35 E-value=93 Score=30.76 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|.++|++|+++ .|.+ .....|.+..|++ +|+.++|+...++|+.
T Consensus 93 ~~~A~~~~~kAl~l-----~P~~---~~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 93 VQGALQCYTRAIQI-----NPAF---ADAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35689999999875 3444 3445666666665 7999999998888765
No 173
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=29.15 E-value=1.3e+02 Score=20.12 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 9 l~~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
+..++.+....|+++++...+++++.
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~ 29 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALE 29 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 45678888889999999999999887
No 174
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=27.35 E-value=56 Score=29.26 Aligned_cols=48 Identities=8% Similarity=0.049 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchh-HhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~Pir-LgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
-++|.+.|++|+++. |-. +..-.-|+-|+..-.++++.|....++|+.
T Consensus 220 ~ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 220 MEKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 366999999999875 543 666777888887777999998887777655
No 175
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=26.83 E-value=1.9e+02 Score=21.19 Aligned_cols=71 Identities=6% Similarity=-0.102 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLR 230 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~~~ds~~IlqLLr 230 (262)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.++-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 5678888888765 45554 344555555554 79999998776665543 2222224455566666
Q ss_pred hhHhhhhc
Q 024800 231 DNLTLWTS 238 (262)
Q Consensus 231 dNl~~W~~ 238 (262)
.-+..+..
T Consensus 143 ~~~~~~~~ 150 (162)
T 3rkv_A 143 ERRAEKKA 150 (162)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 65555443
No 176
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=26.71 E-value=3.7e+02 Score=24.52 Aligned_cols=47 Identities=15% Similarity=0.275 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHh---CCHHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEIL---NSSEKACTMAKQAFEE 206 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~---~~~~~A~~iAk~afd~ 206 (262)
+.|.+.|++|+++ .|.+| ....|.+..+.. + |+.++|.+..+++++.
T Consensus 108 ~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 108 EAAAAAYTRAHQL-----LPEEP---YITAQLLNWRRR-LCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-hhccccHHHHHHHHHHHHhc
Confidence 5688899998865 34444 344555555554 6 9999999888887664
No 177
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=25.98 E-value=1.4e+02 Score=19.45 Aligned_cols=27 Identities=19% Similarity=0.373 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 8 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
-+..++.+..+.|+|++++.++++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~ 34 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQ 34 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 344555666666666666666666665
No 178
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=25.81 E-value=3.5e+02 Score=23.97 Aligned_cols=58 Identities=17% Similarity=0.264 Sum_probs=38.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhh-hhhHHHHHH
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS-LRAAWRIIS 69 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~-~R~s~R~l~ 69 (262)
+-+.+++.+....|+|++++....+++. .+ |. ..+=.+.+..++... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~--l~-P~-~~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIE--LN-AA-NYTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHH--hC-cc-CHHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 4566788888889999999999999998 43 44 344445555555443 32 455555554
No 179
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=24.38 E-value=3.2e+02 Score=22.99 Aligned_cols=24 Identities=25% Similarity=0.135 Sum_probs=18.2
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 11 YLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 11 ~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
-+|...-+.|+|++++....+++.
T Consensus 4 ~~a~~~~~~g~~~~A~~~~~~~~~ 27 (388)
T 1w3b_A 4 ELAHREYQAGDFEAAERHCMQLWR 27 (388)
T ss_dssp THHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHHHHH
Confidence 356667778888888888887776
No 180
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=24.09 E-value=1e+02 Score=26.65 Aligned_cols=49 Identities=16% Similarity=0.176 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc--------------hhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 151 ENTMLSYKAAQDIALTDLAPTHP--------------IRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 151 e~A~~aY~~A~~~a~~~L~pt~P--------------irLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 45788888888653 2333 122467788887765 7999999998888765
No 181
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=24.08 E-value=2e+02 Score=20.62 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=14.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 9 l~~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
+..+|....+.|+|++++..+++++.
T Consensus 21 ~~~~a~~~~~~g~~~~A~~~~~~al~ 46 (142)
T 2xcb_A 21 LYALGFNQYQAGKWDDAQKIFQALCM 46 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 34455555555666666666655554
No 182
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=23.36 E-value=82 Score=25.68 Aligned_cols=73 Identities=16% Similarity=0.112 Sum_probs=47.5
Q ss_pred CCCCchhhhHhhhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHhhcCCCC----CchhHhHhhhHHHHHHHHhCC
Q 024800 117 ATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPT----HPIRLGLALNFSVFYYEILNS 192 (262)
Q Consensus 117 ~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt----~PirLgLaLN~SVF~yEi~~~ 192 (262)
+.++++-.-|.++--+. =.+..+ ...++-.+.|++|.. .+||+ ..-+.-|=++|+.| .++ +|
T Consensus 10 p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D 75 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QE 75 (161)
T ss_dssp CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HC
T ss_pred CCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cC
Confidence 44567777776652211 001122 567788899998874 46665 33456688999999 455 88
Q ss_pred HHHHHHHHHHH
Q 024800 193 SEKACTMAKQA 203 (262)
Q Consensus 193 ~~~A~~iAk~a 203 (262)
+++|.++=+.|
T Consensus 76 ~d~aR~vy~~a 86 (161)
T 4h7y_A 76 PDDARDYFQMA 86 (161)
T ss_dssp GGGCHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887776666
No 183
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=22.82 E-value=1.1e+02 Score=25.53 Aligned_cols=28 Identities=11% Similarity=0.082 Sum_probs=19.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024800 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (262)
Q Consensus 7 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (262)
+.+..+|.+..+.|+|++++.++.+.+.
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAIT 32 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4555667777777777777777777765
No 184
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=22.49 E-value=2.4e+02 Score=20.89 Aligned_cols=57 Identities=9% Similarity=-0.124 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 209 (262)
.+.|...|++|+.++.. . .+|...+.+++.-...|.-.|+.++|+...++|++-+-.
T Consensus 123 ~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 123 LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 45689999999998853 2 345555555555455555689999999888877776543
No 185
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=21.78 E-value=1.6e+02 Score=19.32 Aligned_cols=61 Identities=15% Similarity=0.157 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHH-HHHHHHHHHhhhhhhhhhHHHHHHHHhhh
Q 024800 9 YVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE-ERNLLSVAYKNVIGSLRAAWRIISSIEQK 74 (262)
Q Consensus 9 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~e-ERnLls~ayKn~i~~~R~s~R~l~~ieq~ 74 (262)
.+.+|...-+.|+|++++..++++++ .. |. +.. =...+..+|.. .+....|...+......
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~--~~-p~-~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQ--TE-PV-GKDEAYYLMGNAYRK-LGDWQKALNNYQSAIEL 64 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHH--HC-SS-THHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH--HC-CC-cHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence 35678888889999999999999997 33 33 445 67777877765 46677777777654443
No 186
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=20.68 E-value=2e+02 Score=26.39 Aligned_cols=47 Identities=26% Similarity=0.364 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 024800 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (262)
Q Consensus 150 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 205 (262)
.+.|.+.|++|+++ .|.+| ....|.+..++. +|+.++|++..++|++
T Consensus 73 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 119 (568)
T 2vsy_A 73 HAEAAVLLQQASDA-----APEHP---GIALWLGHALED-AGQAEAAAAAYTRAHQ 119 (568)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 36689999999875 34443 344566665554 7999999988887765
No 187
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=20.40 E-value=1.5e+02 Score=30.75 Aligned_cols=60 Identities=15% Similarity=0.076 Sum_probs=42.3
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhh--hhhHHHHHHHH
Q 024800 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS--LRAAWRIISSI 71 (262)
Q Consensus 10 ~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~--~R~s~R~l~~i 71 (262)
...++|.++.+.|+-++++-+..++.. + ++-..-...|.+.-||..+.- .-.|+-.|.+.
T Consensus 903 ~hv~~LFe~~~~~~~vi~fa~lAi~~~-~-~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 903 LHLSKKLFEESAYIDALEFSLLADASK-E-TDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHHC-C-SCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhc-c-CCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 456789999999999999999888732 2 332223445788888887744 44777777655
Done!