BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024802
(262 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|B Chain B, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|C Chain C, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|D Chain D, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
Length = 283
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 86 NDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFI 145
ND I ++ G+WQ I D+AV A+ AG D A YG E + G I
Sbjct: 32 NDGNHIPQLGYGVWQ-------ISNDEAVSAVSEALKAGYRHIDTATIYGNEEGV-GKAI 83
Query: 146 NRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS 205
N R FL TK S++ ++ D S +++ +D+ HW S
Sbjct: 84 NGSGIARADIFL-----TTKLWNSDQGYESTL--KAFDTSLKKLGTDYVDLYLIHWPMPS 136
Query: 206 NPGYLDALNHLTDLKEEGKIKTVALTNFDTERL-RIILENGIPVVSNQV 253
+++ LKEEG++K++ ++NF T L R+I E+G+ V NQ+
Sbjct: 137 KDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQI 185
>pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From
Gluconobacter Oxydans
Length = 348
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 15/163 (9%)
Query: 91 ICRVLNGMWQTSG-GWGRIDRDDAVDAMLRYADAGLTTFDMADHYG--PAEDLYGIFINR 147
+ RV G W G WG D D+ V + D G+ D A YG +E++ G R
Sbjct: 31 LSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVG----R 86
Query: 148 VRRERPPEFLDKVRGLTKWVPPPVKMTSSI-------VRESIDVSRRRMDVPCLDMLQFH 200
E+P + + WV K +R+ ++ S RR+ V +D+ Q H
Sbjct: 87 ALAEKPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIH 146
Query: 201 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE 243
W D P ++ L L ++GKI+ + ++NF E++ I E
Sbjct: 147 WPDDKTP-IDESARELQKLHQDGKIRALGVSNFSPEQMDIFRE 188
>pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 82 VSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYA-DAGLTTFDMADHYGPA--- 137
V G LE+ ++ G SG + ++ A+++ A + G+T FD +D YG
Sbjct: 5 VKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSN 64
Query: 138 EDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPV-------KMTSSIVRESIDVSRRRMD 190
E+L G + ++ RE K++ TK+ + K T VR + S +R+D
Sbjct: 65 EELLGKALKQLPRE-------KIQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLD 117
Query: 191 VPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLR 239
V +D+ H D + P + + L L EEGKIK V L+ + +R
Sbjct: 118 VDYIDLFYIHRIDTTVPIEI-TMGELXKLVEEGKIKYVGLSEASPDTIR 165
>pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 338
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 82 VSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYA-DAGLTTFDMADHYGPA--- 137
V G LE+ ++ G SG + ++ A+++ A + G+T FD +D YG
Sbjct: 5 VKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSN 64
Query: 138 EDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPV-------KMTSSIVRESIDVSRRRMD 190
E+L G + ++ RE K++ TK+ + K T VR + S +R+D
Sbjct: 65 EELLGKALKQLPRE-------KIQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLD 117
Query: 191 VPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLR 239
V +D+ H D + P + + L L EEGKIK V L+ + +R
Sbjct: 118 VDYIDLFYIHRIDTTVPIEI-TMGELKKLVEEGKIKYVGLSEASPDTIR 165
>pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 82 VSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYA-DAGLTTFDMADHYGPA--- 137
V G LE+ ++ G SG + ++ A+++ A + G+T FD +D YG
Sbjct: 4 VKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSN 63
Query: 138 EDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPV-------KMTSSIVRESIDVSRRRMD 190
E+L G + ++ RE K++ TK+ + K T VR + S +R+D
Sbjct: 64 EELLGKALKQLPRE-------KIQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLD 116
Query: 191 VPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLR 239
V +D+ H D + P + + L L EEGKIK V L+ + +R
Sbjct: 117 VDYIDLFYIHRIDTTVPIEI-TMGELKKLVEEGKIKYVGLSEASPDTIR 164
>pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|B Chain B, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|C Chain C, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|D Chain D, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|E Chain E, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|F Chain F, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|G Chain G, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|H Chain H, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
Length = 366
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 85 GNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYA-DAGLTTFDMADHYGP----AED 139
G L + + G+W +G ++ ++ A+LR A D G+T FD+A++YGP AE+
Sbjct: 39 GKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEE 95
Query: 140 LYGIFINRVRRERPPEFLDKV-----RGLTKWVPPPVKMTSS--IVRESIDVSRRRMDVP 192
+G R+ RE + D++ G W P P S + S+D S +RM +
Sbjct: 96 NFG----RLLREDFAAYRDELIISTKAGYDMW-PGPYGSGGSRKYLLASLDQSLKRMGLE 150
Query: 193 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE 243
+D+ H D + P + + L + GK V ++++ ER + ++E
Sbjct: 151 YVDIFYSHRVDENTP-MEETASALAHAVQSGKALYVGISSYSPERTQKMVE 200
>pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|B Chain B, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|C Chain C, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|D Chain D, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|E Chain E, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|F Chain F, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|G Chain G, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|H Chain H, Crystal Structure Of Yghz From E. Coli
pdb|4AST|A Chain A, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|B Chain B, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|C Chain C, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|D Chain D, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|E Chain E, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|F Chain F, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|G Chain G, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|H Chain H, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
Length = 346
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 85 GNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYA-DAGLTTFDMADHYGP----AED 139
G L + + G+W +G ++ ++ A+LR A D G+T FD+A++YGP AE+
Sbjct: 19 GKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEE 75
Query: 140 LYGIFINRVRRERPPEFLDKV-----RGLTKWVPPPVKMTSS--IVRESIDVSRRRMDVP 192
+G R+ RE + D++ G W P P S + S+D S +RM +
Sbjct: 76 NFG----RLLREDFAAYRDELIISTKAGYDMW-PGPYGSGGSRKYLLASLDQSLKRMGLE 130
Query: 193 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE 243
+D+ H D + P + + L + GK V ++++ ER + ++E
Sbjct: 131 YVDIFYSHRVDENTP-MEETASALAHAVQSGKALYVGISSYSPERTQKMVE 180
>pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And
Essential Gene Of Salmonella Typhimurium
pdb|3ERP|B Chain B, Structure Of Idp01002, A Putative Oxidoreductase From And
Essential Gene Of Salmonella Typhimurium
Length = 353
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 17/184 (9%)
Query: 85 GNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIF 144
G +++ + G+W G R++ A+ + R D G+T FD+A++YGP
Sbjct: 40 GRSGVKLPAISLGLWHNFGDTTRVENSRAL--LQRAFDLGITHFDLANNYGPPPGSAECN 97
Query: 145 INRVRRE-----RPPEFLDKVRGLTKWVPPPVKMTS-SIVRESIDVSRRRMDVPCLDMLQ 198
R+ +E R + G T W P S + S+D S +RM + +D+
Sbjct: 98 FGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFY 157
Query: 199 FHWWDYSNP--GYLDALNHLTDLKEEGKIKTVALTNFDTERLRI---ILEN-GIPVVSNQ 252
H D P + AL+HL GK V ++N+ + R ILE+ G P + +Q
Sbjct: 158 HHRPDPETPLKETMKALDHLV---RHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQ 214
Query: 253 VWHS 256
+S
Sbjct: 215 PKYS 218
>pdb|1PZ1|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11b(Holo)
pdb|1PZ1|B Chain B, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11b(Holo)
Length = 333
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 82 VSNGNDSLEICRVLNGMWQTSG-GWGRIDRDDAVDAMLRYADAGLTTFDMADHY--GPAE 138
S + +E R+ G W G WG D +++ + D G+T D A Y G +E
Sbjct: 4 TSIADTGIEASRIGLGTWAIGGTXWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSE 63
Query: 139 DLYGIFINRVRRERPPEFLDKVRGLTK----WVPPPVKMTSSIVR--ESIDVSRRRMDVP 192
++ G I + D+V TK W + ++ R E ++ S +R+
Sbjct: 64 EIVGKAIKEYXKR------DQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTD 117
Query: 193 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTER 237
+D+ Q HW D P + +L + GKI+ + ++NF E+
Sbjct: 118 YIDLYQVHWPDPLVP-IEETAEVXKELYDAGKIRAIGVSNFSIEQ 161
>pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11a(Apo)
pdb|1PZ0|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11a(Holo)
Length = 312
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 174 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNF 233
+ +++S+D S +R++ +D+ H+ D P +A+N L + K+ GKI+++ ++NF
Sbjct: 99 SPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKD-EAVNALNEXKKAGKIRSIGVSNF 157
Query: 234 DTERLRIILENGI 246
E+L+ ++G+
Sbjct: 158 SLEQLKEANKDGL 170
>pdb|1MZR|A Chain A, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved
By Molecular Replacement
pdb|1MZR|B Chain B, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved
By Molecular Replacement
Length = 296
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 179 RESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERL 238
RE++ S +++ + +D+ HW + Y++A + +L++EG IK++ + NF L
Sbjct: 107 REALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHL 166
Query: 239 -RIILENGIPVVSNQV 253
R+I E G+ V NQ+
Sbjct: 167 QRLIDETGVTPVINQI 182
>pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZM|B Chain B, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|A Chain A, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|B Chain B, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
Length = 283
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 8/139 (5%)
Query: 104 GWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRERPPEFLDKVRGL 163
G G + +A ++ +AG D A YG E G I R D++
Sbjct: 28 GVGELSDSEAERSVSAALEAGYRLIDTAAAYGN-EAAVGRAIAASGIPR-----DEIYVT 81
Query: 164 TKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEG 223
TK P TSS + + S R+ + +D+ HW Y+D+ L +KE+G
Sbjct: 82 TKLATPDQGFTSS--QAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDG 139
Query: 224 KIKTVALTNFDTERLRIIL 242
+++ + NF E L I+
Sbjct: 140 IARSIGVCNFGAEDLETIV 158
>pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph
pdb|1LQA|B Chain B, Tas Protein From Escherichia Coli In Complex With Nadph
Length = 346
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 30/158 (18%)
Query: 105 WGRIDRDDAVDAMLRYADA-GLTTFDMADHY---------GPAEDLYGIFINRVRRERPP 154
+G + + A L YA A G+ D+A+ Y G E G ++ +
Sbjct: 23 FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKL 82
Query: 155 EFLDKVRGLT----KWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW--------- 201
KV G + K + P + +RE++ S +R+ LD+ Q HW
Sbjct: 83 IIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFG 142
Query: 202 -----WDYSNPG--YLDALNHLTDLKEEGKIKTVALTN 232
W S P LD L+ L + + GKI+ + ++N
Sbjct: 143 KLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN 180
>pdb|3UP8|A Chain A, Crystal Structure Of A Putative 2,5-Diketo-D-Gluconic Acid
Reductase B
pdb|3UP8|B Chain B, Crystal Structure Of A Putative 2,5-Diketo-D-Gluconic Acid
Reductase B
Length = 298
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 181 SIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDT----E 236
S+D S R++ +D+L HW P + + L +++ GK++ + ++NF+T E
Sbjct: 109 SVDESLRKLRTDHVDLLLLHWPGSDVP-XAERIGALNEVRNAGKVRHIGISNFNTTQXEE 167
Query: 237 RLRIILENGIPVVSNQV 253
R+ + P+ +NQV
Sbjct: 168 AARL---SDAPIATNQV 181
>pdb|4F40|A Chain A, X-Ray Crystal Structure Of Apo Prostaglandin F Synthase
From Leishmania Major Friedlin
pdb|4F40|B Chain B, X-Ray Crystal Structure Of Apo Prostaglandin F Synthase
From Leishmania Major Friedlin
pdb|4G5D|A Chain A, X-Ray Crystal Structure Of Prostaglandin F Synthase From
Leishmania Major Friedlin Bound To Nadph
pdb|4G5D|B Chain B, X-Ray Crystal Structure Of Prostaglandin F Synthase From
Leishmania Major Friedlin Bound To Nadph
Length = 288
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 27/179 (15%)
Query: 72 VATSDKQSITVSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYA-DAGLTTFDM 130
+A DK +T+SNG +++ + G+WQ+ G + + +++A AG D
Sbjct: 5 MAGVDKAMVTLSNG---VKMPQFGLGVWQSPAG-------EVTENAVKWALCAGYRHIDT 54
Query: 131 ADHYGPAEDL-YGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRM 189
A Y E + G+ + V RE V TK S++ + + SR+++
Sbjct: 55 AAIYKNEESVGAGLRASGVPRE-------DVFITTKLWNTEQGYESTLA--AFEESRQKL 105
Query: 190 DVPCLDMLQFHW------WDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIIL 242
V +D+ HW YLD+ L +E K++ + ++NF L +L
Sbjct: 106 GVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVL 164
>pdb|3VPR|A Chain A, Crystal Structure Of A Tetr Family Transcriptional
Regulator Pfmr From Thermus Thermophilus Hb8
pdb|3VPR|B Chain B, Crystal Structure Of A Tetr Family Transcriptional
Regulator Pfmr From Thermus Thermophilus Hb8
pdb|3VPR|C Chain C, Crystal Structure Of A Tetr Family Transcriptional
Regulator Pfmr From Thermus Thermophilus Hb8
pdb|3VPR|D Chain D, Crystal Structure Of A Tetr Family Transcriptional
Regulator Pfmr From Thermus Thermophilus Hb8
Length = 190
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 201 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGI 246
+++ + P ++ L + L E ++KT+AL + E LR IL G+
Sbjct: 89 YFEENYPFFVTXLQGIKSLSPENRLKTIALRDRHEENLRAILRRGV 134
>pdb|3H7U|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme
Akr4c9
Length = 335
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 25/189 (13%)
Query: 79 SITVSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAE 138
+IT N + V G WQ S G DAV A ++ G D A YG +
Sbjct: 24 AITFFKLNTGAKFPSVGLGTWQASPGL----VGDAVAAAVKI---GYRHIDCAQIYGNEK 76
Query: 139 DLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 198
++ G + ++ +R + D W V E+++ + + + + +D+
Sbjct: 77 EI-GAVLKKLFEDRVVKREDLFITSKLWC---TDHDPQDVPEALNRTLKDLQLEYVDLYL 132
Query: 199 FHWWDYSNPGYL-------------DALNHLTDLKEEGKIKTVALTNFDTERLRIILENG 245
HW G + + L + GK + + ++NF T++L +LE
Sbjct: 133 IHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELA 192
Query: 246 -IPVVSNQV 253
+P NQV
Sbjct: 193 RVPPAVNQV 201
>pdb|1YNP|A Chain A, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo
Form)
pdb|1YNP|B Chain B, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo
Form)
pdb|1YNQ|A Chain A, Aldo-Keto Reductase Akr11c1 From Bacillus Halodurans (Holo
Form)
pdb|1YNQ|B Chain B, Aldo-Keto Reductase Akr11c1 From Bacillus Halodurans (Holo
Form)
Length = 317
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 174 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNF 233
+ + ++E++ S RR+ +D+ Q H +P + + +LK+EG I+ +++
Sbjct: 113 SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDP-IDETIEAFEELKQEGVIRYYGISSI 171
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine
Protease Ervatamin C
pdb|1O0E|B Chain B, 1.9 Angstrom Crystal Structure Of A Plant Cysteine
Protease Ervatamin C
Length = 208
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/105 (19%), Positives = 39/105 (37%)
Query: 30 TQAMAVTIHNALPSLNALKSKSIIRNRPESRRVSANSVRCCQVATSDKQSITVSNGNDSL 89
++ +++ +N +P N K + +P + + A+S + Q ++ + N +
Sbjct: 100 SKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNHGV 159
Query: 90 EICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHY 134
I W WGR + MLR GL +Y
Sbjct: 160 TIVGYQANYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYY 204
>pdb|1ZUA|X Chain X, Crystal Structure Of Akr1b10 Complexed With Nadp+ And
Tolrestat
Length = 317
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 21/105 (20%)
Query: 170 PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPG------------------YLD 211
P +VR++ + + + + + LD+ HW G +LD
Sbjct: 82 PTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLD 141
Query: 212 ALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPV--VSNQV 253
A + +L +EG +K + ++NF ++ +L G+ V+NQV
Sbjct: 142 AWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQV 186
>pdb|1C9W|A Chain A, Cho Reductase With Nadp+
Length = 315
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 32/178 (17%)
Query: 97 GMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRERPPEF 156
G WQ+ G + A+DA R+ D ++ +H I VRRE
Sbjct: 18 GTWQSPPGQVKEAVKVAIDAGYRHIDCAYAYYN--EHEVGEAIQEKIKEKAVRRED---- 71
Query: 157 LDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPG-------- 208
L V L W P +++E+ + + + LD+ HW PG
Sbjct: 72 LFIVSKL--W---PTCFERKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKELFPKDD 126
Query: 209 ----------YLDALNHLTDLKEEGKIKTVALTNFDTERL-RIILENGI--PVVSNQV 253
+LDA + +L +EG +K + ++NF+ ++ RI+ + G+ V+NQV
Sbjct: 127 QGNVLTSKITFLDAWEVMEELVDEGLVKALGVSNFNHFQIERILNKPGLKHKPVTNQV 184
>pdb|4EXA|A Chain A, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|B Chain B, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|C Chain C, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|D Chain D, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|E Chain E, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|F Chain F, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXB|A Chain A, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|B Chain B, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|C Chain C, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|D Chain D, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|E Chain E, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|F Chain F, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
Length = 292
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 40/180 (22%)
Query: 109 DRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRER-------PPEFLDKVR 161
D +A D + D G+ D A YG +E+ G + R +RE EF+D
Sbjct: 68 DDREAADLLALARDLGINLIDTAPAYGRSEERLGPLL-RGQREHWVIVSKVGEEFVD--- 123
Query: 162 GLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNH------ 215
G + + +++ R S++ S +R++ ++++ H S+ LD L +
Sbjct: 124 GQSVF-----DFSAAHTRRSVERSLKRLETDRIELVLVH----SDGNDLDILENSEVYPT 174
Query: 216 LTDLKEEGKIKTVALTNFDTE-RLRIILENGI-------------PVVSNQVWHSNGWFV 261
L LK EG I L+ E LR + E PV+ H+ G V
Sbjct: 175 LAALKREGLIGAYGLSGKTVEGGLRALREGDCAMVTYNLNERAERPVIEYAAAHAKGILV 234
>pdb|3F7J|A Chain A, B.Subtilis Yvgn
pdb|3F7J|B Chain B, B.Subtilis Yvgn
Length = 276
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 199 FHWWDYSNPG---YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENG-IPVVSNQV 253
HW PG Y D L L ++GKI+ + ++NF L +L++ I + NQV
Sbjct: 111 IHW-----PGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQV 164
>pdb|3D3F|A Chain A, Crystal Structure Of Yvgn And Cofactor Nadph From Bacillus
Subtilis
pdb|3D3F|B Chain B, Crystal Structure Of Yvgn And Cofactor Nadph From Bacillus
Subtilis
Length = 275
Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 199 FHWWDYSNPG---YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENG-IPVVSNQV 253
HW PG Y D L L ++GKI+ + ++NF L +L++ I + NQV
Sbjct: 110 IHW-----PGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQV 163
>pdb|1XXL|A Chain A, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis At 2.1 A Resolution
pdb|1XXL|B Chain B, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis At 2.1 A Resolution
pdb|2GLU|A Chain A, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis
pdb|2GLU|B Chain B, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis
Length = 239
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 128 FDMADHYGPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 166
F + DHY P + + F+N + R R P + + L++W
Sbjct: 120 FLLVDHYAPEDPVLDEFVNHLNRLRDPSHV-RESSLSEW 157
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,633,184
Number of Sequences: 62578
Number of extensions: 293176
Number of successful extensions: 688
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 674
Number of HSP's gapped (non-prelim): 27
length of query: 262
length of database: 14,973,337
effective HSP length: 97
effective length of query: 165
effective length of database: 8,903,271
effective search space: 1469039715
effective search space used: 1469039715
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)