Query         024803
Match_columns 262
No_of_seqs    195 out of 1634
Neff          7.0 
Searched_HMMs 13730
Date          Mon Mar 25 14:41:36 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024803.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024803hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2ayja1 g.41.8.7 (A:1-56) Ribo  79.7    0.36 2.6E-05   30.5   1.5   25  145-169    17-41  (56)
  2 d1joca1 g.50.1.1 (A:1348-1411)  76.8    0.54   4E-05   30.3   1.9   24  148-171     9-34  (64)
  3 d1vfya_ g.50.1.1 (A:) vps27p p  75.4    0.52 3.8E-05   30.7   1.5   23  149-171     7-31  (67)
  4 d2dkta2 g.93.1.1 (A:82-137) RI  74.4    0.23 1.6E-05   31.6  -0.6   30  149-178    22-54  (56)
  5 d1wfka_ g.50.1.1 (A:) Zinc fin  69.5     1.2   9E-05   30.5   2.4   25  146-170     8-34  (88)
  6 d1dvpa2 g.50.1.1 (A:149-220) H  67.2     1.2 8.4E-05   29.4   1.8   24  148-171    14-39  (72)
  7 d2dmda2 g.37.1.1 (A:8-33) Zinc  66.6    0.62 4.5E-05   24.2   0.2   14  162-175     2-15  (26)
  8 d2c6aa1 g.41.11.1 (A:290-335)   65.5     1.1 8.2E-05   26.9   1.2   20  148-167    14-33  (46)
  9 d2adra2 g.37.1.1 (A:131-161) A  61.2    0.73 5.3E-05   25.3  -0.2   13  163-175     3-15  (31)
 10 d2cr8a1 g.41.11.1 (A:8-48) MDM  59.5     1.8 0.00013   25.3   1.4   19  149-167     6-24  (41)
 11 d1y02a2 g.50.1.1 (A:20-70) Rif  56.7       2 0.00015   26.3   1.3   21  150-170     3-25  (51)
 12 d1njqa_ g.37.1.3 (A:) SUPERMAN  52.9     2.2 0.00016   24.5   1.0   13  158-170     2-14  (37)
 13 d2pg3a1 c.26.2.1 (A:1-230) Que  49.7     1.3 9.6E-05   34.6  -0.6   22  150-173   185-206 (230)
 14 d1olza3 g.16.2.1 (A:481-536) S  49.1       1 7.3E-05   28.3  -1.1   21  165-185     6-29  (56)
 15 d1q5wa_ g.41.11.1 (A:) Npl4 {R  44.9     4.8 0.00035   21.7   1.5   20  149-168     8-27  (31)
 16 d1wila_ g.50.1.3 (A:) Hypothet  42.5     9.3 0.00068   25.7   3.0   26  145-170    13-38  (89)
 17 d1zbdb_ g.50.1.1 (B:) Effector  40.3     7.1 0.00052   27.9   2.4   26  145-170    46-74  (124)
 18 d1bora_ g.44.1.1 (A:) Acute pr  31.7      26  0.0019   21.0   3.8   18  161-179    24-41  (56)
 19 d1lpva_ g.62.1.1 (A:) DM domai  26.9      12  0.0009   22.8   1.4   27  157-183     6-34  (52)
 20 d2gnra1 b.40.4.15 (A:8-144) Hy  26.7     5.5  0.0004   29.1  -0.4   30  141-170    33-62  (137)
 21 d2cona1 g.41.15.1 (A:8-73) RNA  25.8      14   0.001   23.7   1.6   21  149-169    10-31  (66)
 22 d2j0151 g.41.8.5 (5:2-60) Ribo  25.6      14   0.001   23.0   1.5   22  146-169    28-50  (59)

No 1  
>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}
Probab=79.71  E-value=0.36  Score=30.46  Aligned_cols=25  Identities=20%  Similarity=0.264  Sum_probs=21.8

Q ss_pred             CCCCCCCCCCccCCCCcccccccCC
Q 024803          145 ELGVDPDNENSLSRKRVRYCKICKA  169 (262)
Q Consensus       145 ~~~~~C~~C~~~kP~Rs~HC~~C~~  169 (262)
                      .....|.+|..+-|+|+..|+.||.
T Consensus        17 ~~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          17 FLKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             CCCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhhHHHhhccccCCccccccccCCC
Confidence            4467999999999999999998765


No 2  
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.83  E-value=0.54  Score=30.34  Aligned_cols=24  Identities=13%  Similarity=0.116  Sum_probs=17.2

Q ss_pred             CCCCCCCc--cCCCCcccccccCCcc
Q 024803          148 VDPDNENS--LSRKRVRYCKICKAHV  171 (262)
Q Consensus       148 ~~C~~C~~--~kP~Rs~HC~~C~~CV  171 (262)
                      .-|..|+.  -.-.|-|||+.||+-+
T Consensus         9 ~~C~~C~~~F~~~~rrHHCR~CG~v~   34 (64)
T d1joca1           9 QNCMACGKGFSVTVRRHHCRQCGNIF   34 (64)
T ss_dssp             CBCTTTCCBCCSSSCCEECTTTCCEE
T ss_pred             CcCcCcCCcccCCccccchhhhCCee
Confidence            45778865  2336789999999854


No 3  
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.37  E-value=0.52  Score=30.72  Aligned_cols=23  Identities=13%  Similarity=0.089  Sum_probs=16.9

Q ss_pred             CCCCCCc--cCCCCcccccccCCcc
Q 024803          149 DPDNENS--LSRKRVRYCKICKAHV  171 (262)
Q Consensus       149 ~C~~C~~--~kP~Rs~HC~~C~~CV  171 (262)
                      -|..|+.  -.-.|-|||+.||+-+
T Consensus         7 ~C~~C~~~F~~~~rkhhCr~CG~~f   31 (67)
T d1vfya_           7 ACMICSKKFSLLNRKHHCRSCGGVF   31 (67)
T ss_dssp             BCTTTCCBCBTTBCCEECTTTCCEE
T ss_pred             ccccCCCcccCcccccccccCCCEe
Confidence            3888875  3346889999999854


No 4  
>d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.41  E-value=0.23  Score=31.62  Aligned_cols=30  Identities=13%  Similarity=0.198  Sum_probs=21.2

Q ss_pred             CCCCCCccCCCCcccccccCCccCCC---Cccc
Q 024803          149 DPDNENSLSRKRVRYCKICKAHVEGF---DHHC  178 (262)
Q Consensus       149 ~C~~C~~~kP~Rs~HC~~C~~CV~r~---DHHC  178 (262)
                      .|..|+.=+.+.-.||..|+.|+.+-   +|.|
T Consensus        22 ~CgiCRvG~~~~ffHC~~C~~C~~~~l~~~H~C   54 (56)
T d2dkta2          22 SCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKC   54 (56)
T ss_dssp             TTTEEEESCGGGEEEETTTTEEEEGGGSSSSCC
T ss_pred             CCCceeecCCccccccCccccccCcccCCCccc
Confidence            46666666667788999999998553   4665


No 5  
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.46  E-value=1.2  Score=30.52  Aligned_cols=25  Identities=16%  Similarity=0.048  Sum_probs=18.7

Q ss_pred             CCCCCCCCCc--cCCCCcccccccCCc
Q 024803          146 LGVDPDNENS--LSRKRVRYCKICKAH  170 (262)
Q Consensus       146 ~~~~C~~C~~--~kP~Rs~HC~~C~~C  170 (262)
                      ....|..|+.  --..|-|||+.||+.
T Consensus         8 ~~s~C~~C~~~Fs~~~rrhhCr~CG~v   34 (88)
T d1wfka_           8 MESRCYGCAVKFTLFKKEYGCKNCGRA   34 (88)
T ss_dssp             CCSBCTTTCCBCCSSSCEEECSSSCCE
T ss_pred             ccCcCcccCchhccccccccccccChh
Confidence            3567888875  335688999999885


No 6  
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=67.25  E-value=1.2  Score=29.42  Aligned_cols=24  Identities=13%  Similarity=0.094  Sum_probs=17.6

Q ss_pred             CCCCCCCc--cCCCCcccccccCCcc
Q 024803          148 VDPDNENS--LSRKRVRYCKICKAHV  171 (262)
Q Consensus       148 ~~C~~C~~--~kP~Rs~HC~~C~~CV  171 (262)
                      +.|..|+.  -.-.|-|||+.||+.+
T Consensus        14 ~~C~~C~~~F~~~~rrhhCr~CG~~~   39 (72)
T d1dvpa2          14 RVCHRCRVEFTFTNRKHHCRNCGQVF   39 (72)
T ss_dssp             SBCTTTCCBCCSSSCCEECTTTCCEE
T ss_pred             CccccCCCcccCccccccccccCCee
Confidence            34888875  3346889999998854


No 7  
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.61  E-value=0.62  Score=24.20  Aligned_cols=14  Identities=21%  Similarity=0.565  Sum_probs=11.9

Q ss_pred             ccccccCCccCCCC
Q 024803          162 RYCKICKAHVEGFD  175 (262)
Q Consensus       162 ~HC~~C~~CV~r~D  175 (262)
                      |.|.+|++|..|-|
T Consensus         2 hkc~~c~kcfsrkd   15 (26)
T d2dmda2           2 HKCEVCGKCFSRKD   15 (26)
T ss_dssp             CCBTTTTBCCCCHH
T ss_pred             CccchhhhHhcchh
Confidence            67999999988766


No 8  
>d2c6aa1 g.41.11.1 (A:290-335) MDM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.46  E-value=1.1  Score=26.88  Aligned_cols=20  Identities=15%  Similarity=0.233  Sum_probs=17.2

Q ss_pred             CCCCCCCccCCCCccccccc
Q 024803          148 VDPDNENSLSRKRVRYCKIC  167 (262)
Q Consensus       148 ~~C~~C~~~kP~Rs~HC~~C  167 (262)
                      -.|.+|+..-||--+||..|
T Consensus        14 WkC~~C~~~N~Pl~ryC~rC   33 (46)
T d2c6aa1          14 WKCTSCNEMNPPLPSHCNRC   33 (46)
T ss_dssp             EECTTTCCEECSSCSSCTTT
T ss_pred             ccCccccccCCcchhHhHHH
Confidence            36999999999999998876


No 9  
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=61.23  E-value=0.73  Score=25.25  Aligned_cols=13  Identities=23%  Similarity=0.552  Sum_probs=11.8

Q ss_pred             cccccCCccCCCC
Q 024803          163 YCKICKAHVEGFD  175 (262)
Q Consensus       163 HC~~C~~CV~r~D  175 (262)
                      +|..|+||-.|.|
T Consensus         3 ~C~~C~R~FaRrD   15 (31)
T d2adra2           3 PCGLCNRAFTRRD   15 (31)
T ss_dssp             ECTTTCCEESSHH
T ss_pred             ccccccchhhHHH
Confidence            6999999999988


No 10 
>d2cr8a1 g.41.11.1 (A:8-48) MDM4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.52  E-value=1.8  Score=25.26  Aligned_cols=19  Identities=21%  Similarity=0.467  Sum_probs=15.4

Q ss_pred             CCCCCCccCCCCccccccc
Q 024803          149 DPDNENSLSRKRVRYCKIC  167 (262)
Q Consensus       149 ~C~~C~~~kP~Rs~HC~~C  167 (262)
                      .|.+|+..-||--.||..|
T Consensus         6 kC~~C~~~N~Pl~ryC~rC   24 (41)
T d2cr8a1           6 QCTECKKFNSPSKRYCFRC   24 (41)
T ss_dssp             ECSSSCCEECSSCCBCTTT
T ss_pred             ecCcccccCCcchhHHHHH
Confidence            4888888888888888766


No 11 
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.70  E-value=2  Score=26.29  Aligned_cols=21  Identities=19%  Similarity=0.313  Sum_probs=13.8

Q ss_pred             CCCCCc--cCCCCcccccccCCc
Q 024803          150 PDNENS--LSRKRVRYCKICKAH  170 (262)
Q Consensus       150 C~~C~~--~kP~Rs~HC~~C~~C  170 (262)
                      |..|+.  -.-.|-|||+.||+-
T Consensus         3 C~~C~~~F~~~~rkhhCr~CG~~   25 (51)
T d1y02a2           3 CKSCGAHFANTARKQTCLDCKKN   25 (51)
T ss_dssp             CTTTCCCCSSGGGCEECTTTCCE
T ss_pred             ccccCCcccCCccCcccccCCcc
Confidence            555543  233578999999874


No 12 
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=52.85  E-value=2.2  Score=24.46  Aligned_cols=13  Identities=31%  Similarity=0.657  Sum_probs=11.2

Q ss_pred             CCCcccccccCCc
Q 024803          158 RKRVRYCKICKAH  170 (262)
Q Consensus       158 P~Rs~HC~~C~~C  170 (262)
                      |+|.+-|+.|++-
T Consensus         2 p~r~~~C~~C~k~   14 (37)
T d1njqa_           2 PPRSYTCSFCKRE   14 (37)
T ss_dssp             CSSSEECTTTCCE
T ss_pred             CCCccCCCCCCCc
Confidence            7889999999874


No 13 
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]}
Probab=49.70  E-value=1.3  Score=34.64  Aligned_cols=22  Identities=14%  Similarity=0.024  Sum_probs=17.0

Q ss_pred             CCCCCccCCCCcccccccCCccCC
Q 024803          150 PDNENSLSRKRVRYCKICKAHVEG  173 (262)
Q Consensus       150 C~~C~~~kP~Rs~HC~~C~~CV~r  173 (262)
                      -.+|  ++|.+.+||-.|..|+.|
T Consensus       185 T~SC--y~~~~~~~CG~C~~C~~R  206 (230)
T d2pg3a1         185 TLTC--YNGIKGDGCGQCAACHLR  206 (230)
T ss_dssp             CCCC--TTSCCTTTTSCSHHHHHH
T ss_pred             cCCC--CCCCCCCCCCCCHhHHHH
Confidence            3455  578888999999998876


No 14 
>d1olza3 g.16.2.1 (A:481-536) Semaphorin 4d {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.14  E-value=1  Score=28.34  Aligned_cols=21  Identities=24%  Similarity=0.472  Sum_probs=17.6

Q ss_pred             cccCCccCCCCcccccc---ccch
Q 024803          165 KICKAHVEGFDHHCPAF---GNCI  185 (262)
Q Consensus       165 ~~C~~CV~r~DHHCpWv---~nCV  185 (262)
                      +.|+.||.-+|-||.|=   +.|+
T Consensus         6 ~sC~~C~~a~DPyCgW~~~~~~C~   29 (56)
T d1olza3           6 GTCEDCVLARDPYCAWSPPTATCV   29 (56)
T ss_dssp             CSHHHHHHTTCTTEEEETTTTEEE
T ss_pred             ccHHHHHcCCCCcCcccCCCCCee
Confidence            46899999999999994   5576


No 15 
>d1q5wa_ g.41.11.1 (A:) Npl4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=44.91  E-value=4.8  Score=21.67  Aligned_cols=20  Identities=10%  Similarity=0.345  Sum_probs=16.2

Q ss_pred             CCCCCCccCCCCcccccccC
Q 024803          149 DPDNENSLSRKRVRYCKICK  168 (262)
Q Consensus       149 ~C~~C~~~kP~Rs~HC~~C~  168 (262)
                      -|..|--...|.+.||..|+
T Consensus         8 sC~HCTf~N~pgtd~CeMC~   27 (31)
T d1q5wa_           8 ACQHCTFMNQPGTGHCEMCS   27 (31)
T ss_dssp             ECSSSCCEECTTCSBCTTTC
T ss_pred             EeeeeeeecCCCCCcchhhc
Confidence            48888888888888888775


No 16 
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.47  E-value=9.3  Score=25.70  Aligned_cols=26  Identities=12%  Similarity=0.125  Sum_probs=22.1

Q ss_pred             CCCCCCCCCCccCCCCcccccccCCc
Q 024803          145 ELGVDPDNENSLSRKRVRYCKICKAH  170 (262)
Q Consensus       145 ~~~~~C~~C~~~kP~Rs~HC~~C~~C  170 (262)
                      .....|..|..+...----||+|+|+
T Consensus        13 ~~D~mC~vC~v~t~~~l~pCRvCtRv   38 (89)
T d1wila_          13 VNDEMCDVCEVWTAESLFPCRVCTRV   38 (89)
T ss_dssp             CCSCCCTTTCCCCSSCCSSCSSSSSC
T ss_pred             CcCccccccCcccccceecceeecch
Confidence            34578999999888888889999997


No 17 
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=40.29  E-value=7.1  Score=27.88  Aligned_cols=26  Identities=12%  Similarity=-0.034  Sum_probs=18.4

Q ss_pred             CCCCCCCCCCcc-CC--CCcccccccCCc
Q 024803          145 ELGVDPDNENSL-SR--KRVRYCKICKAH  170 (262)
Q Consensus       145 ~~~~~C~~C~~~-kP--~Rs~HC~~C~~C  170 (262)
                      ...+-|..|+.. .+  .|.|||+.||+-
T Consensus        46 ~~~~~C~~C~~~f~~~~~~~~~C~~C~~~   74 (124)
T d1zbdb_          46 DGVNRCILCGEQLGMLGSASVVCEDCKKN   74 (124)
T ss_dssp             CSSSBCSSSCCBCSTTSCCEEECTTTCCE
T ss_pred             cCCCcCcccCCcccCCCCCCCcCccCCcc
Confidence            345679999764 32  577899988764


No 18 
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.70  E-value=26  Score=21.05  Aligned_cols=18  Identities=22%  Similarity=0.584  Sum_probs=11.0

Q ss_pred             cccccccCCccCCCCcccc
Q 024803          161 VRYCKICKAHVEGFDHHCP  179 (262)
Q Consensus       161 s~HC~~C~~CV~r~DHHCp  179 (262)
                      ..| ..|..|+.+..+.||
T Consensus        24 CgH-~fC~~Ci~~~~~~CP   41 (56)
T d1bora_          24 CLH-TLCSGCLEASGMQCP   41 (56)
T ss_dssp             TSC-CSBTTTCSSSSSSCS
T ss_pred             CCC-HHhHHHHHcCCCcCc
Confidence            445 466666666666666


No 19 
>d1lpva_ g.62.1.1 (A:) DM domain of Doublesex (dsx) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=26.87  E-value=12  Score=22.78  Aligned_cols=27  Identities=11%  Similarity=0.065  Sum_probs=16.4

Q ss_pred             CCCCcccccccCCccCCCCc--ccccccc
Q 024803          157 SRKRVRYCKICKAHVEGFDH--HCPAFGN  183 (262)
Q Consensus       157 kP~Rs~HC~~C~~CV~r~DH--HCpWv~n  183 (262)
                      +||+...|+.=|.-+..-+|  +|||-+.
T Consensus         6 ~~p~CaRCrNHG~~~~lKgHKr~C~~~~C   34 (52)
T d1lpva_           6 TPPNCARCRNHGLKITLKGHKRYCKFRYC   34 (52)
T ss_dssp             CCSSCHHHHTTTCCCTTTTCGGGCTTTTC
T ss_pred             CCCCCcccccCCceeecCCcccccCCCCC
Confidence            44555555544555555566  9999863


No 20 
>d2gnra1 b.40.4.15 (A:8-144) Hypothetical protein SSO2064 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=26.71  E-value=5.5  Score=29.10  Aligned_cols=30  Identities=13%  Similarity=0.267  Sum_probs=20.8

Q ss_pred             hcCCCCCCCCCCCCccCCCCcccccccCCc
Q 024803          141 VEGSELGVDPDNENSLSRKRVRYCKICKAH  170 (262)
Q Consensus       141 ~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~C  170 (262)
                      ++.+.....|..|....-|...+|..|+.-
T Consensus        33 ~egrL~~~~C~~CG~v~~Ppr~~Cp~C~s~   62 (137)
T d2gnra1          33 KQNKIIGSKCSKCGRIFVPARSYCEHCFVK   62 (137)
T ss_dssp             HTTCCEEEECTTTCCEEESCCSEETTTTEE
T ss_pred             hcCeEEEEEcCCCCCEEeCccccCCCCCCC
Confidence            344556779999977555555579988763


No 21 
>d2cona1 g.41.15.1 (A:8-73) RNA-binding protein NOB1 (Nin one binding) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.79  E-value=14  Score=23.65  Aligned_cols=21  Identities=14%  Similarity=0.159  Sum_probs=10.3

Q ss_pred             CCCCCCccCCCCccc-ccccCC
Q 024803          149 DPDNENSLSRKRVRY-CKICKA  169 (262)
Q Consensus       149 ~C~~C~~~kP~Rs~H-C~~C~~  169 (262)
                      .|..|....++-+++ |+.||.
T Consensus        10 rC~aCf~~t~~~~k~FCpkCGn   31 (66)
T d2cona1          10 RCHGCFKTTSDMNRVFCGHCGN   31 (66)
T ss_dssp             ECSSSCCEESCSSCCSCSSSCC
T ss_pred             EeeecCcCcCCcccccCcccCC
Confidence            355555555554444 555543


No 22 
>d2j0151 g.41.8.5 (5:2-60) Ribosomal protein L32p {Thermus thermophilus [TaxId: 274]}
Probab=25.61  E-value=14  Score=23.04  Aligned_cols=22  Identities=18%  Similarity=0.107  Sum_probs=14.7

Q ss_pred             CCCCCCCCCccCCCCccc-ccccCC
Q 024803          146 LGVDPDNENSLSRKRVRY-CKICKA  169 (262)
Q Consensus       146 ~~~~C~~C~~~kP~Rs~H-C~~C~~  169 (262)
                      ....|+.|..  +-+.|| |..||.
T Consensus        28 ~l~~C~~CG~--~~~pHrvC~~CG~   50 (59)
T d2j0151          28 TLVPCPECKA--MKPPHTVCPECGY   50 (59)
T ss_dssp             CCBCCSSSSS--CBCTTCBCTTTCC
T ss_pred             ceeECCCCCC--cccceeECCCCCe
Confidence            3568999985  444565 777763


Done!