Query 024808
Match_columns 262
No_of_seqs 190 out of 411
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 14:46:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024808.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024808hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fzya_ d.20.1.1 (A:) Ubiquiti 50.2 15 0.0011 27.5 5.8 36 68-103 28-63 (149)
2 d2uyza1 d.20.1.1 (A:3-158) Ubi 49.1 17 0.0012 27.6 6.1 48 55-102 20-67 (156)
3 d2e2ca_ d.20.1.1 (A:) Ubiquiti 44.1 17 0.0013 27.6 5.4 35 68-102 35-69 (156)
4 d1jatb_ d.20.1.1 (B:) Ubiquiti 42.6 22 0.0016 26.6 5.7 36 68-103 34-69 (136)
5 d2awfa1 d.20.1.1 (A:7-131) Ubi 38.9 27 0.002 25.3 5.6 35 68-102 26-60 (125)
6 d1pzva_ d.20.1.1 (A:) Ubiquiti 35.8 24 0.0018 26.6 5.1 35 68-102 27-61 (161)
7 d1yrva1 d.20.1.1 (A:1-148) Ubi 35.4 30 0.0022 25.9 5.5 35 69-103 31-65 (148)
8 d2f4za1 d.20.1.1 (A:32-192) Hy 35.4 31 0.0023 26.2 5.7 35 69-103 41-75 (161)
9 d2ucza_ d.20.1.1 (A:) Ubiquiti 34.5 35 0.0026 25.6 5.8 35 68-102 30-64 (164)
10 d2bepa1 d.20.1.1 (A:1-154) Ubi 34.1 35 0.0025 25.5 5.7 35 68-102 33-67 (154)
11 d1ayza_ d.20.1.1 (A:) Ubiquiti 33.6 36 0.0026 25.1 5.7 34 69-102 30-63 (153)
12 d1zdna1 d.20.1.1 (A:6-156) Ubi 31.4 37 0.0027 25.3 5.5 34 69-102 33-66 (151)
13 d2a4da1 d.20.1.1 (A:82-220) Ub 30.2 70 0.0051 23.5 6.9 36 68-103 35-70 (139)
14 d1i7ka_ d.20.1.1 (A:) Ubiquiti 30.1 43 0.0032 24.8 5.6 34 69-102 28-61 (146)
15 d1z3da1 d.20.1.1 (A:2-150) Ubi 29.7 46 0.0033 24.6 5.7 35 69-103 30-64 (149)
16 d1j7db_ d.20.1.1 (B:) Ubiquiti 28.8 45 0.0033 24.7 5.5 35 68-102 28-62 (149)
17 d2z5da1 d.20.1.1 (A:23-174) Ub 28.2 31 0.0023 25.8 4.4 35 69-103 26-60 (152)
18 d1yh2a1 d.20.1.1 (A:1-154) Ubi 27.3 48 0.0035 24.4 5.4 34 69-102 29-62 (154)
19 d2fo3a1 d.20.1.1 (A:9-117) Put 26.5 57 0.0042 22.9 5.5 35 68-102 24-58 (109)
20 d1e43a1 b.71.1.1 (A:394-483) B 26.3 7.8 0.00057 28.0 0.4 14 112-125 66-79 (90)
21 d1yf9a1 d.20.1.1 (A:13-170) Ub 25.5 49 0.0036 25.0 5.2 35 69-103 23-57 (158)
22 d1jata_ d.20.1.1 (A:) Ubiquiti 25.4 58 0.0043 24.2 5.6 35 68-102 29-63 (152)
23 d1z2ua1 d.20.1.1 (A:1-147) Ubi 25.2 62 0.0045 23.5 5.7 34 69-102 28-61 (147)
24 d2d3na1 b.71.1.1 (A:399-485) B 24.5 8.9 0.00065 27.6 0.4 14 112-125 63-76 (87)
25 d1ud2a1 b.71.1.1 (A:391-480) B 22.4 10 0.00075 27.4 0.4 14 112-125 66-79 (90)
26 d2a7la1 d.20.1.1 (A:1-117) Ubi 20.3 97 0.007 21.7 5.7 36 68-103 31-66 (117)
No 1
>d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]}
Probab=50.23 E-value=15 Score=27.49 Aligned_cols=36 Identities=8% Similarity=-0.073 Sum_probs=28.9
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (262)
++..++|.+.+.|+.+.....-+=++.+.+.+.|+.
T Consensus 28 ~~~~~~w~~~I~gp~~t~y~gg~f~~~i~fp~~YP~ 63 (149)
T d1fzya_ 28 ESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPF 63 (149)
T ss_dssp SSCSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCchhEEEEEEEcCCCCCCCCCceeEEEEecCCccc
Confidence 457889999999988766655566899999999973
No 2
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
Probab=49.08 E-value=17 Score=27.57 Aligned_cols=48 Identities=10% Similarity=0.168 Sum_probs=33.8
Q ss_pred EccceEEcCCCCCCCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 55 YGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 55 ~Gn~a~~l~kk~~e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
+|-.|.+.....+..+..+|.+.+.|+.+.....-+=++.+.+.+.|+
T Consensus 20 ~g~~~~p~~~~~~~~n~~~W~~~i~gp~gtpY~gg~f~~~i~fp~~YP 67 (156)
T d2uyza1 20 FGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYP 67 (156)
T ss_dssp TTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCeEEEecCCCCCCCcccEEEEEEEcCCCCCccCCEEEEEEeCCcccc
Confidence 466666554444456899999999998775543333478888888886
No 3
>d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]}
Probab=44.15 E-value=17 Score=27.59 Aligned_cols=35 Identities=11% Similarity=0.259 Sum_probs=27.7
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
++..+.|.+.+.|+.+.....-+=++.+.+-+.|+
T Consensus 35 ~~dl~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP 69 (156)
T d2e2ca_ 35 GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYP 69 (156)
T ss_dssp SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCcccEEEEEEEcCCccccCCCEEEEEEEecCCCC
Confidence 35789999999998876665555578888888886
No 4
>d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]}
Probab=42.60 E-value=22 Score=26.63 Aligned_cols=36 Identities=11% Similarity=0.222 Sum_probs=28.1
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (262)
+...++|.+.+.|+.+.....-+=++.+.+-+.|+.
T Consensus 34 d~~l~~W~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~ 69 (136)
T d1jatb_ 34 DITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPD 69 (136)
T ss_dssp CTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTT
T ss_pred CCceeEEEEEEECCCCChhhcCEEEEEEEecCCCCC
Confidence 457999999999987765544455788888898873
No 5
>d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]}
Probab=38.89 E-value=27 Score=25.25 Aligned_cols=35 Identities=11% Similarity=0.260 Sum_probs=27.3
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
+.....|.+-+.|+.+..-..-+=++.|.+.+.|+
T Consensus 26 ~~dl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP 60 (125)
T d2awfa1 26 DNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYP 60 (125)
T ss_dssp TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCCceEEEEEEeCCCCcccCCCeeEEEEecCCCcC
Confidence 34678899999998876655556677888888886
No 6
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]}
Probab=35.80 E-value=24 Score=26.55 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=27.1
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
+...+.|.+-|.|+.+.....-+=++.+.|.+.|+
T Consensus 27 ~~dl~~W~~~i~gp~~tpY~gg~f~~~i~fp~~YP 61 (161)
T d1pzva_ 27 DNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYP 61 (161)
T ss_dssp TTCTTEEEEEEECCTTSSCSSCEEEEEEECCTTGG
T ss_pred CCCceEEEEEEECCcchhhcCCEEEEEEeCCCCCC
Confidence 34678999999998776665566678888888886
No 7
>d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]}
Probab=35.45 E-value=30 Score=25.94 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=27.0
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024808 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (262)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (262)
+..+.|.+.+.|+.+.....-+=++.+.+.+.|+.
T Consensus 31 ~n~~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~ 65 (148)
T d1yrva1 31 EDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNY 65 (148)
T ss_dssp TTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTT
T ss_pred CcccEEEEEEEeCCCCccCCCceEEEEEecccccc
Confidence 47889999999987765544444888888888874
No 8
>d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]}
Probab=35.38 E-value=31 Score=26.22 Aligned_cols=35 Identities=9% Similarity=0.145 Sum_probs=27.1
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024808 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (262)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (262)
++...|.+.+.|+.+.....-+=++.+.+.+.|+.
T Consensus 41 ~nl~~W~~~I~Gp~~TpY~gg~f~~~i~fp~~YP~ 75 (161)
T d2f4za1 41 GDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 75 (161)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CccceeEEEEeCCCCCccCCCEEEEEEeccCCCCC
Confidence 57889999999987766544444888888888874
No 9
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]}
Probab=34.49 E-value=35 Score=25.62 Aligned_cols=35 Identities=11% Similarity=0.293 Sum_probs=26.6
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
++....|.+.+.|+.+..-..=+=++.+.+.+.|+
T Consensus 30 e~nl~~w~~~I~Gp~~tpy~gg~f~~~i~fp~~YP 64 (164)
T d2ucza_ 30 ENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYP 64 (164)
T ss_dssp SSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred ccchhhhheeeeCCCcccccCCeeEEEEecCCCCC
Confidence 45678999999998776554445577888888887
No 10
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=34.07 E-value=35 Score=25.46 Aligned_cols=35 Identities=3% Similarity=-0.003 Sum_probs=26.9
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
+++...|.+-+.|+.+.....-+=++.+.|.+.|+
T Consensus 33 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 67 (154)
T d2bepa1 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYP 67 (154)
T ss_dssp SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCChhheEeeEecCccccccCCeeEEEEecccccc
Confidence 34677999999998776554444588999999887
No 11
>d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]}
Probab=33.61 E-value=36 Score=25.09 Aligned_cols=34 Identities=9% Similarity=0.229 Sum_probs=26.6
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
+....|.+.+.|+.+.....-+=++.+.+.+.|+
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP 63 (153)
T d1ayza_ 30 DNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYP 63 (153)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CcHHhHhheeeCCCCCccCCCEEEEEEecCcccc
Confidence 4789999999998776654445588888888886
No 12
>d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]}
Probab=31.43 E-value=37 Score=25.35 Aligned_cols=34 Identities=15% Similarity=0.124 Sum_probs=26.2
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
+....|.+.+.|+.+..-..-+=++.+.+-+.|+
T Consensus 33 ~dl~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 66 (151)
T d1zdna1 33 EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFP 66 (151)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred cchheeEEEEecCCCcCccCCceeeeeecCCCCC
Confidence 4678899999998776555556667888888887
No 13
>d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]}
Probab=30.23 E-value=70 Score=23.55 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=27.0
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (262)
+....+|.+.+.|+.+.....=+=++.+.+-+.|+.
T Consensus 35 d~nl~~W~~~I~Gp~~TpYegg~f~~~i~fp~~YP~ 70 (139)
T d2a4da1 35 DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPE 70 (139)
T ss_dssp CTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred cccccEEEEEEECCCCCchhcCEEEEEEECCCCCCC
Confidence 457888999999998766555555677777788763
No 14
>d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]}
Probab=30.09 E-value=43 Score=24.81 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=25.9
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
+..+.|.+-+.|+.+.....-+=++.+.+-+.|+
T Consensus 28 ~d~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 61 (146)
T d1i7ka_ 28 DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYP 61 (146)
T ss_dssp TEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTT
T ss_pred CcccEEEEEEecCccccccCCEEEEEEEecCCCC
Confidence 5799999999998775544444478888888886
No 15
>d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]}
Probab=29.66 E-value=46 Score=24.57 Aligned_cols=35 Identities=9% Similarity=0.193 Sum_probs=27.9
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024808 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (262)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (262)
+....|.+.+.|+.+.....-+=++.+.+.+.|+.
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~ 64 (149)
T d1z3da1 30 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPN 64 (149)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CchhhhceeEECCCCccccCCEEEEEEEecCcCCC
Confidence 57889999999988766655556899999999973
No 16
>d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]}
Probab=28.80 E-value=45 Score=24.67 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=26.6
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
++....|.+.+.|+.+..-..-+=++.+.+.+.|+
T Consensus 28 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 62 (149)
T d1j7db_ 28 ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYP 62 (149)
T ss_dssp SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCcccEeeeEEECCcccccCCCEEEEEEecCCccc
Confidence 35777899999998776554444488888888887
No 17
>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 H [TaxId: 9606]}
Probab=28.25 E-value=31 Score=25.76 Aligned_cols=35 Identities=9% Similarity=0.037 Sum_probs=26.3
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024808 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (262)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (262)
+..++|.|.+.|+.+..-..=+=++.+.+-+.|+.
T Consensus 26 ~~l~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 60 (152)
T d2z5da1 26 GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPF 60 (152)
T ss_dssp EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CChheEEEEEEcCCCCCcCCCEEEEEEEecCCCCC
Confidence 36678999999987765544455788888888873
No 18
>d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 T [TaxId: 9606]}
Probab=27.26 E-value=48 Score=24.39 Aligned_cols=34 Identities=9% Similarity=0.063 Sum_probs=27.4
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
+....|.+.+.|+.+.....=+=++.+.+-+.|+
T Consensus 29 ~~~~~w~~~I~Gp~~TpY~gg~f~~~i~~p~~YP 62 (154)
T d1yh2a1 29 DQMDDLRAQILGGANTPYEKGVFKLEVIIPERYP 62 (154)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred cchhhhhceEeCCCCCCCCCCEEEEEEecCcccc
Confidence 5688999999998876665566678888888886
No 19
>d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme, E2 domain {Plasmodium chabaudi [TaxId: 5825]}
Probab=26.51 E-value=57 Score=22.93 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=24.3
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
++..++|.+.+.|+.+..-..-+=++.+.+-+.|+
T Consensus 24 ~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 58 (109)
T d2fo3a1 24 PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYP 58 (109)
T ss_dssp TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCcccEEEEEEecCchhhhcCCCceEEEEeccccC
Confidence 34678999999998765544444456666667775
No 20
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]}
Probab=26.31 E-value=7.8 Score=28.04 Aligned_cols=14 Identities=43% Similarity=1.222 Sum_probs=11.7
Q ss_pred CcEEEeeeEEeEEE
Q 024808 112 PFELSESGWGEFEI 125 (262)
Q Consensus 112 PFeVtE~GWGEF~I 125 (262)
+=.|.|.|||+|.+
T Consensus 66 ~V~id~~G~g~F~v 79 (90)
T d1e43a1 66 PVVINSEGWGEFHV 79 (90)
T ss_dssp CEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 45678999999987
No 21
>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC {Leishmania major [TaxId: 5664]}
Probab=25.49 E-value=49 Score=24.96 Aligned_cols=35 Identities=14% Similarity=0.004 Sum_probs=27.9
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024808 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (262)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (262)
+...+|.|-+.|+.+.....-+=++.+.+-+.|+.
T Consensus 23 d~~~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 57 (158)
T d1yf9a1 23 DTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPF 57 (158)
T ss_dssp SSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCceEEEEEEECCCCCCccCcEEEEEEECcccchh
Confidence 57888999999998766654455788999999984
No 22
>d1jata_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]}
Probab=25.42 E-value=58 Score=24.15 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=27.8
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
++....|.+.+.|+.+.....=+=++.+.+-+.|+
T Consensus 29 ~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP 63 (152)
T d1jata_ 29 DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYP 63 (152)
T ss_dssp TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTT
T ss_pred CCccchhheeeeCCchhhhcCCEEEEEEecCccCC
Confidence 35889999999998776665556678888888886
No 23
>d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC {Caenorhabditis elegans, E2 2 [TaxId: 6239]}
Probab=25.23 E-value=62 Score=23.49 Aligned_cols=34 Identities=6% Similarity=0.147 Sum_probs=26.7
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024808 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (262)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (262)
++...|.+.+.|+.+.....-+=++.+.+-+.|+
T Consensus 28 ~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP 61 (147)
T d1z2ua1 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61 (147)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CchhhhhheecCCCCCCcCCCceEEEEecCcCCC
Confidence 4788999999998776665555578888888887
No 24
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=24.50 E-value=8.9 Score=27.59 Aligned_cols=14 Identities=29% Similarity=1.021 Sum_probs=11.3
Q ss_pred CcEEEeeeEEeEEE
Q 024808 112 PFELSESGWGEFEI 125 (262)
Q Consensus 112 PFeVtE~GWGEF~I 125 (262)
+=.|.+.|||+|.+
T Consensus 63 ~V~id~~G~g~F~v 76 (87)
T d2d3na1 63 TVTINADGWGNFSV 76 (87)
T ss_dssp EEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 34577999999987
No 25
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=22.43 E-value=10 Score=27.39 Aligned_cols=14 Identities=36% Similarity=0.888 Sum_probs=11.2
Q ss_pred CcEEEeeeEEeEEE
Q 024808 112 PFELSESGWGEFEI 125 (262)
Q Consensus 112 PFeVtE~GWGEF~I 125 (262)
.=.|.+.|||+|.+
T Consensus 66 ~V~id~~G~g~F~V 79 (90)
T d1ud2a1 66 SVTINGDGWGEFFT 79 (90)
T ss_dssp EEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 34567999999987
No 26
>d2a7la1 d.20.1.1 (A:1-117) Ubiquitin-protein ligase W (E2 W) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.27 E-value=97 Score=21.68 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=26.3
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024808 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (262)
Q Consensus 68 e~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (262)
++...+|.+-+.|+.+.....-+=++.+.+-+.|+.
T Consensus 31 ~~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~ 66 (117)
T d2a7la1 31 QNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPF 66 (117)
T ss_dssp CCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTT
T ss_pred CCCceEEEEEEeCCCCccccCCeeeEEEecCccccc
Confidence 457889999999987755444444677777787763
Done!