Query 024811
Match_columns 262
No_of_seqs 248 out of 2106
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 14:49:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024811.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024811hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xtp_A LMAJ004091AAA; SGPP, st 99.9 6.6E-26 2.3E-30 197.2 9.2 179 66-262 12-190 (254)
2 2ex4_A Adrenal gland protein A 99.9 5.4E-22 1.8E-26 172.4 7.8 153 101-262 26-178 (241)
3 3dmg_A Probable ribosomal RNA 99.7 9.2E-19 3.2E-23 164.5 6.5 215 35-262 101-333 (381)
4 4gek_A TRNA (CMO5U34)-methyltr 99.7 3.5E-18 1.2E-22 152.5 9.8 100 156-262 69-171 (261)
5 1pjz_A Thiopurine S-methyltran 99.7 1.6E-18 5.3E-23 148.1 6.0 106 156-262 21-133 (203)
6 3hnr_A Probable methyltransfer 99.7 1.6E-17 5.4E-22 141.4 10.7 94 157-262 45-138 (220)
7 3h2b_A SAM-dependent methyltra 99.7 1.8E-17 6.2E-22 139.5 8.5 104 139-262 31-134 (203)
8 2gb4_A Thiopurine S-methyltran 99.7 3.2E-17 1.1E-21 145.5 9.9 105 157-262 68-184 (252)
9 1vl5_A Unknown conserved prote 99.7 2.3E-17 7.9E-22 144.4 8.6 97 157-262 37-133 (260)
10 4hg2_A Methyltransferase type 99.7 1.3E-17 4.3E-22 148.8 6.6 90 157-262 39-128 (257)
11 3l8d_A Methyltransferase; stru 99.7 1.6E-17 5.5E-22 143.0 6.8 94 157-262 53-146 (242)
12 3ou2_A SAM-dependent methyltra 99.7 6E-17 2E-21 136.9 10.0 94 157-262 46-139 (218)
13 2p7i_A Hypothetical protein; p 99.7 9.3E-18 3.2E-22 144.0 5.0 92 157-262 42-134 (250)
14 3bus_A REBM, methyltransferase 99.7 8.9E-17 3.1E-21 141.2 10.8 101 155-262 59-159 (273)
15 3ujc_A Phosphoethanolamine N-m 99.7 5.1E-17 1.7E-21 141.3 8.6 100 155-262 53-152 (266)
16 2pjd_A Ribosomal RNA small sub 99.7 2.2E-17 7.4E-22 152.1 6.1 203 35-262 76-296 (343)
17 3e23_A Uncharacterized protein 99.7 5.8E-17 2E-21 137.4 7.9 92 157-262 43-134 (211)
18 2o57_A Putative sarcosine dime 99.7 1.7E-16 5.8E-21 141.5 11.3 100 156-262 81-180 (297)
19 1kpg_A CFA synthase;, cyclopro 99.7 3.2E-16 1.1E-20 139.0 12.6 100 155-262 62-161 (287)
20 3jwg_A HEN1, methyltransferase 99.7 2.1E-16 7E-21 134.8 10.2 104 157-262 29-134 (219)
21 4dcm_A Ribosomal RNA large sub 99.7 1.8E-16 6.1E-21 148.5 10.7 212 35-262 100-327 (375)
22 3jwh_A HEN1; methyltransferase 99.7 2.4E-16 8.1E-21 134.4 10.5 104 157-262 29-134 (217)
23 3ofk_A Nodulation protein S; N 99.7 1.2E-16 4.1E-21 135.7 8.0 96 157-262 51-147 (216)
24 1nkv_A Hypothetical protein YJ 99.7 1.5E-16 5.1E-21 138.3 7.9 100 155-262 34-133 (256)
25 3dtn_A Putative methyltransfer 99.7 2.1E-16 7.3E-21 135.8 8.7 97 157-262 44-141 (234)
26 3ggd_A SAM-dependent methyltra 99.6 1.8E-16 6.1E-21 137.3 7.8 97 156-262 55-156 (245)
27 1xxl_A YCGJ protein; structura 99.6 3E-16 1E-20 136.2 8.9 99 155-262 19-117 (239)
28 3pfg_A N-methyltransferase; N, 99.6 5.2E-16 1.8E-20 136.0 9.6 93 157-262 50-144 (263)
29 2fk8_A Methoxy mycolic acid sy 99.6 1.4E-15 4.8E-20 137.1 12.6 100 155-262 88-187 (318)
30 3mgg_A Methyltransferase; NYSG 99.6 3E-16 1E-20 138.2 7.7 100 155-262 35-135 (276)
31 3hem_A Cyclopropane-fatty-acyl 99.6 1.4E-15 4.9E-20 136.3 12.2 112 139-262 58-176 (302)
32 3ege_A Putative methyltransfer 99.6 4.6E-16 1.6E-20 136.9 8.6 91 156-262 33-123 (261)
33 1ve3_A Hypothetical protein PH 99.6 1E-15 3.6E-20 130.2 10.5 98 157-262 38-135 (227)
34 3dlc_A Putative S-adenosyl-L-m 99.6 3E-16 1E-20 132.2 7.1 97 159-262 45-141 (219)
35 2xvm_A Tellurite resistance pr 99.6 5.6E-16 1.9E-20 129.1 8.6 98 157-262 32-129 (199)
36 2yqz_A Hypothetical protein TT 99.6 4.2E-16 1.4E-20 135.5 8.1 97 156-262 38-134 (263)
37 2pxx_A Uncharacterized protein 99.6 1.4E-15 4.8E-20 127.9 11.0 98 157-262 42-152 (215)
38 3bkw_A MLL3908 protein, S-aden 99.6 5.2E-16 1.8E-20 133.4 8.5 94 157-262 43-137 (243)
39 3g5l_A Putative S-adenosylmeth 99.6 3.8E-16 1.3E-20 135.9 7.4 95 157-262 44-138 (253)
40 2p35_A Trans-aconitate 2-methy 99.6 6.1E-16 2.1E-20 134.4 8.1 93 156-262 32-125 (259)
41 1wzn_A SAM-dependent methyltra 99.6 1.1E-15 3.8E-20 132.6 9.4 112 138-262 26-138 (252)
42 3iv6_A Putative Zn-dependent a 99.6 4.4E-16 1.5E-20 139.5 6.9 99 155-262 43-141 (261)
43 3kkz_A Uncharacterized protein 99.6 7E-16 2.4E-20 135.6 8.0 100 155-262 44-143 (267)
44 3f4k_A Putative methyltransfer 99.6 6.5E-16 2.2E-20 134.3 7.5 100 155-262 44-143 (257)
45 3m70_A Tellurite resistance pr 99.6 6.7E-16 2.3E-20 137.1 7.7 97 157-262 120-216 (286)
46 2p8j_A S-adenosylmethionine-de 99.6 8.9E-16 3E-20 129.3 7.9 99 157-262 23-121 (209)
47 2gs9_A Hypothetical protein TT 99.6 4.4E-16 1.5E-20 131.7 6.1 90 157-262 36-125 (211)
48 3dh0_A SAM dependent methyltra 99.6 4.4E-16 1.5E-20 132.3 6.1 98 157-262 37-136 (219)
49 3dli_A Methyltransferase; PSI- 99.6 7.5E-16 2.6E-20 133.4 7.5 92 156-262 40-133 (240)
50 4htf_A S-adenosylmethionine-de 99.6 1E-15 3.5E-20 135.8 8.4 98 157-262 68-166 (285)
51 3bxo_A N,N-dimethyltransferase 99.6 6E-16 2E-20 132.7 6.5 93 157-262 40-134 (239)
52 3thr_A Glycine N-methyltransfe 99.6 4E-16 1.4E-20 138.6 5.5 116 137-262 44-168 (293)
53 1y8c_A S-adenosylmethionine-de 99.6 6.5E-16 2.2E-20 132.6 6.4 112 137-262 22-135 (246)
54 3lcc_A Putative methyl chlorid 99.6 4.9E-16 1.7E-20 134.0 5.7 98 158-262 67-164 (235)
55 3g2m_A PCZA361.24; SAM-depende 99.6 1.8E-15 6.2E-20 135.4 9.0 100 158-262 83-183 (299)
56 3g5t_A Trans-aconitate 3-methy 99.6 1.1E-15 3.8E-20 136.8 7.4 99 157-262 36-142 (299)
57 3sm3_A SAM-dependent methyltra 99.6 3E-15 1E-19 127.6 9.5 104 157-262 30-134 (235)
58 3cgg_A SAM-dependent methyltra 99.6 3E-15 1E-19 123.6 9.0 94 157-262 46-140 (195)
59 3ccf_A Cyclopropane-fatty-acyl 99.6 1.7E-15 5.8E-20 134.2 7.7 91 157-262 57-147 (279)
60 3gu3_A Methyltransferase; alph 99.6 3.2E-15 1.1E-19 133.2 9.1 97 156-262 21-119 (284)
61 3orh_A Guanidinoacetate N-meth 99.6 3.1E-16 1.1E-20 137.0 2.1 97 157-262 60-163 (236)
62 3d2l_A SAM-dependent methyltra 99.6 2.1E-15 7.3E-20 129.6 7.3 96 157-262 33-130 (243)
63 3vc1_A Geranyl diphosphate 2-C 99.6 2.8E-15 9.7E-20 135.3 8.2 100 155-262 115-214 (312)
64 2kw5_A SLR1183 protein; struct 99.6 3.2E-15 1.1E-19 125.6 7.9 95 157-262 30-124 (202)
65 3mti_A RRNA methylase; SAM-dep 99.6 4.8E-15 1.7E-19 123.0 7.7 100 156-262 21-128 (185)
66 1ri5_A MRNA capping enzyme; me 99.6 8.2E-15 2.8E-19 129.6 9.4 101 157-262 64-167 (298)
67 2aot_A HMT, histamine N-methyl 99.6 1.5E-15 5.1E-20 135.9 4.4 99 157-262 52-165 (292)
68 3htx_A HEN1; HEN1, small RNA m 99.6 1.3E-14 4.5E-19 147.1 11.6 105 157-262 721-828 (950)
69 3i9f_A Putative type 11 methyl 99.5 2.4E-15 8.1E-20 123.1 4.1 89 157-262 17-105 (170)
70 1zx0_A Guanidinoacetate N-meth 99.5 2.1E-15 7.1E-20 130.7 3.8 99 157-262 60-163 (236)
71 4fsd_A Arsenic methyltransfera 99.5 7.7E-15 2.6E-19 136.9 7.4 105 156-262 82-196 (383)
72 3g07_A 7SK snRNA methylphospha 99.5 8.4E-15 2.9E-19 131.6 7.3 106 157-262 46-213 (292)
73 2avn_A Ubiquinone/menaquinone 99.5 2E-14 6.8E-19 126.2 9.4 91 157-262 54-145 (260)
74 2vdw_A Vaccinia virus capping 99.5 7.5E-15 2.6E-19 133.5 5.5 106 157-262 48-162 (302)
75 2a14_A Indolethylamine N-methy 99.5 5E-15 1.7E-19 130.9 3.4 107 156-262 54-190 (263)
76 2i62_A Nicotinamide N-methyltr 99.5 7.7E-15 2.6E-19 127.6 4.5 105 157-262 56-191 (265)
77 3ocj_A Putative exported prote 99.5 9.7E-15 3.3E-19 131.4 5.2 101 156-262 117-220 (305)
78 3cc8_A Putative methyltransfer 99.5 2.8E-14 9.7E-19 120.9 7.1 90 157-262 32-123 (230)
79 3e8s_A Putative SAM dependent 99.5 1.1E-14 3.6E-19 123.3 4.4 90 157-262 52-145 (227)
80 3gdh_A Trimethylguanosine synt 99.5 2.2E-15 7.6E-20 130.3 -0.8 97 157-262 78-174 (241)
81 2g72_A Phenylethanolamine N-me 99.5 1.7E-14 5.9E-19 128.5 4.6 106 157-262 71-208 (289)
82 3bkx_A SAM-dependent methyltra 99.5 3.7E-14 1.3E-18 124.6 6.4 101 155-262 41-152 (275)
83 3p9n_A Possible methyltransfer 99.5 1.4E-14 4.8E-19 121.2 3.5 99 157-262 44-146 (189)
84 1vlm_A SAM-dependent methyltra 99.5 2.7E-14 9.3E-19 122.1 5.1 85 158-262 48-132 (219)
85 3m33_A Uncharacterized protein 99.5 5.6E-14 1.9E-18 121.0 7.0 86 157-262 48-135 (226)
86 3dp7_A SAM-dependent methyltra 99.5 1.2E-13 4E-18 127.8 9.6 100 157-262 179-280 (363)
87 4azs_A Methyltransferase WBDD; 99.5 1.3E-14 4.3E-19 142.4 2.8 84 157-247 66-151 (569)
88 3bgv_A MRNA CAP guanine-N7 met 99.5 7.1E-14 2.4E-18 126.0 7.5 106 157-262 34-148 (313)
89 3e05_A Precorrin-6Y C5,15-meth 99.5 1.5E-13 5.1E-18 116.0 8.6 95 156-262 39-135 (204)
90 1dus_A MJ0882; hypothetical pr 99.4 1.1E-13 3.9E-18 113.9 7.4 97 157-262 52-150 (194)
91 2qe6_A Uncharacterized protein 99.4 1.7E-13 5.7E-18 122.7 9.1 96 158-262 78-189 (274)
92 3hm2_A Precorrin-6Y C5,15-meth 99.4 2.4E-13 8.2E-18 111.3 8.3 95 156-262 24-120 (178)
93 3lbf_A Protein-L-isoaspartate 99.4 7.1E-14 2.4E-18 118.2 5.1 92 156-262 76-167 (210)
94 3i53_A O-methyltransferase; CO 99.4 2.1E-13 7E-18 124.1 8.2 98 157-262 169-267 (332)
95 2y1w_A Histone-arginine methyl 99.4 2.7E-13 9.2E-18 125.1 8.8 99 157-262 50-148 (348)
96 3uwp_A Histone-lysine N-methyl 99.4 1.6E-13 5.5E-18 130.3 6.9 134 122-262 141-281 (438)
97 2r3s_A Uncharacterized protein 99.4 2.5E-13 8.5E-18 122.9 7.3 100 156-262 164-264 (335)
98 1yzh_A TRNA (guanine-N(7)-)-me 99.4 4.6E-13 1.6E-17 114.2 8.5 100 157-262 41-149 (214)
99 3mcz_A O-methyltransferase; ad 99.4 2.1E-13 7.3E-18 124.6 6.8 98 158-262 180-280 (352)
100 3evz_A Methyltransferase; NYSG 99.4 2.7E-13 9.1E-18 116.2 7.0 99 157-262 55-172 (230)
101 3mq2_A 16S rRNA methyltransfer 99.4 2.9E-13 1E-17 115.2 7.0 102 157-262 27-133 (218)
102 2ift_A Putative methylase HI07 99.4 6.8E-14 2.3E-18 119.0 3.0 97 157-262 53-156 (201)
103 3njr_A Precorrin-6Y methylase; 99.4 5E-13 1.7E-17 114.1 8.3 93 156-262 54-147 (204)
104 3grz_A L11 mtase, ribosomal pr 99.4 2.9E-13 1E-17 114.1 6.6 93 157-262 60-152 (205)
105 3gwz_A MMCR; methyltransferase 99.4 6E-13 2E-17 123.4 9.3 99 156-262 201-300 (369)
106 2fyt_A Protein arginine N-meth 99.4 4.4E-13 1.5E-17 123.5 8.2 98 157-262 64-164 (340)
107 3fpf_A Mtnas, putative unchara 99.4 4.2E-13 1.4E-17 122.3 7.7 95 155-262 120-215 (298)
108 1x19_A CRTF-related protein; m 99.4 6.7E-13 2.3E-17 122.1 9.0 99 156-262 189-288 (359)
109 1af7_A Chemotaxis receptor met 99.4 3.5E-13 1.2E-17 121.3 6.9 105 158-262 106-245 (274)
110 4e2x_A TCAB9; kijanose, tetron 99.4 3.3E-14 1.1E-18 133.2 0.0 96 156-262 106-201 (416)
111 3eey_A Putative rRNA methylase 99.4 3.1E-13 1.1E-17 113.1 5.6 101 157-262 22-132 (197)
112 3q7e_A Protein arginine N-meth 99.4 4.6E-13 1.6E-17 123.7 7.2 100 157-262 66-166 (349)
113 1fbn_A MJ fibrillarin homologu 99.4 9.2E-13 3.2E-17 113.8 8.4 94 155-262 72-171 (230)
114 1xdz_A Methyltransferase GIDB; 99.4 2.2E-13 7.4E-18 118.5 4.3 94 157-262 70-167 (240)
115 1qzz_A RDMB, aclacinomycin-10- 99.4 8.9E-13 3.1E-17 121.3 8.4 99 156-262 181-280 (374)
116 3r0q_C Probable protein argini 99.4 9.3E-13 3.2E-17 122.9 8.2 100 156-262 62-162 (376)
117 3lpm_A Putative methyltransfer 99.4 4.3E-13 1.5E-17 118.0 5.0 100 157-262 49-169 (259)
118 3b3j_A Histone-arginine methyl 99.4 1.4E-12 4.6E-17 125.9 8.9 99 157-262 158-256 (480)
119 1o9g_A RRNA methyltransferase; 99.3 1.3E-12 4.5E-17 114.0 7.8 104 157-262 51-207 (250)
120 1nt2_A Fibrillarin-like PRE-rR 99.3 1.3E-12 4.4E-17 112.4 7.6 95 155-262 55-154 (210)
121 1vbf_A 231AA long hypothetical 99.3 5.4E-13 1.9E-17 114.3 5.2 90 156-262 69-158 (231)
122 2fca_A TRNA (guanine-N(7)-)-me 99.3 7.4E-13 2.5E-17 113.7 5.8 100 157-262 38-146 (213)
123 3dxy_A TRNA (guanine-N(7)-)-me 99.3 2.4E-13 8.1E-18 117.8 2.4 99 157-262 34-143 (218)
124 3fzg_A 16S rRNA methylase; met 99.3 3.7E-13 1.3E-17 115.8 3.6 95 157-262 49-145 (200)
125 2fpo_A Methylase YHHF; structu 99.3 4.4E-13 1.5E-17 114.0 4.0 97 157-262 54-153 (202)
126 2ip2_A Probable phenazine-spec 99.3 1E-12 3.6E-17 119.2 6.5 96 159-262 169-265 (334)
127 2b3t_A Protein methyltransfera 99.3 1.1E-12 3.7E-17 116.4 6.4 99 157-262 109-231 (276)
128 2fhp_A Methylase, putative; al 99.3 6.4E-13 2.2E-17 109.6 4.6 98 157-262 44-147 (187)
129 1g6q_1 HnRNP arginine N-methyl 99.3 1.5E-12 5.2E-17 119.1 7.4 100 157-262 38-138 (328)
130 1jsx_A Glucose-inhibited divis 99.3 1.5E-12 5E-17 109.6 6.7 92 158-262 66-158 (207)
131 1ne2_A Hypothetical protein TA 99.3 1.1E-12 3.9E-17 110.3 5.9 89 157-259 51-139 (200)
132 1ws6_A Methyltransferase; stru 99.3 2.8E-13 9.4E-18 110.0 1.9 94 157-262 41-140 (171)
133 2yxe_A Protein-L-isoaspartate 99.3 9.9E-13 3.4E-17 111.5 5.2 93 156-262 76-170 (215)
134 1tw3_A COMT, carminomycin 4-O- 99.3 2.2E-12 7.6E-17 118.2 7.9 99 156-262 182-281 (360)
135 2ozv_A Hypothetical protein AT 99.3 3E-12 1E-16 113.3 8.4 104 157-262 36-163 (260)
136 1l3i_A Precorrin-6Y methyltran 99.3 1.3E-12 4.5E-17 107.3 5.7 96 156-262 32-127 (192)
137 3q87_B N6 adenine specific DNA 99.3 1.1E-12 3.7E-17 108.7 5.0 87 157-262 23-116 (170)
138 1dl5_A Protein-L-isoaspartate 99.3 7.7E-13 2.6E-17 120.2 4.5 93 155-262 73-168 (317)
139 3u81_A Catechol O-methyltransf 99.3 1.5E-12 5E-17 111.7 5.5 98 157-262 58-163 (221)
140 3ckk_A TRNA (guanine-N(7)-)-me 99.3 1.3E-12 4.4E-17 114.5 5.2 106 157-262 46-161 (235)
141 3lst_A CALO1 methyltransferase 99.3 2.6E-12 9E-17 117.9 7.3 95 156-262 183-279 (348)
142 1fp2_A Isoflavone O-methyltran 99.3 1.7E-12 6E-17 119.1 6.1 89 157-261 188-277 (352)
143 2esr_A Methyltransferase; stru 99.3 5.3E-13 1.8E-17 109.8 2.3 98 157-262 31-131 (177)
144 4a6d_A Hydroxyindole O-methylt 99.3 5.6E-12 1.9E-16 116.4 8.9 97 156-262 178-276 (353)
145 3p2e_A 16S rRNA methylase; met 99.3 2.3E-12 7.8E-17 112.1 5.9 98 157-262 24-132 (225)
146 2yxd_A Probable cobalt-precorr 99.3 4.7E-12 1.6E-16 103.4 7.3 88 157-258 35-122 (183)
147 2oxt_A Nucleoside-2'-O-methylt 99.3 8.4E-13 2.9E-17 118.1 2.8 98 155-262 72-176 (265)
148 2frn_A Hypothetical protein PH 99.3 4E-12 1.4E-16 113.6 7.2 94 157-262 125-218 (278)
149 3ntv_A MW1564 protein; rossman 99.3 3.3E-12 1.1E-16 110.7 6.5 96 157-262 71-169 (232)
150 1fp1_D Isoliquiritigenin 2'-O- 99.3 1.5E-12 5.1E-17 120.5 4.5 90 156-262 208-299 (372)
151 3reo_A (ISO)eugenol O-methyltr 99.3 3.8E-12 1.3E-16 118.1 7.0 91 156-262 202-293 (368)
152 3g89_A Ribosomal RNA small sub 99.3 2.5E-12 8.4E-17 113.6 4.9 94 157-262 80-177 (249)
153 2zfu_A Nucleomethylin, cerebra 99.3 6.7E-13 2.3E-17 112.5 1.2 78 157-262 67-144 (215)
154 3p9c_A Caffeic acid O-methyltr 99.3 4.7E-12 1.6E-16 117.4 7.0 91 156-262 200-291 (364)
155 1yb2_A Hypothetical protein TA 99.3 5.3E-12 1.8E-16 112.1 7.0 95 155-262 108-204 (275)
156 3adn_A Spermidine synthase; am 99.3 3.8E-12 1.3E-16 115.5 5.8 105 157-262 83-191 (294)
157 4df3_A Fibrillarin-like rRNA/T 99.3 1.2E-11 4.1E-16 109.0 8.8 97 154-262 74-175 (233)
158 2wa2_A Non-structural protein 99.2 3.3E-12 1.1E-16 114.9 5.0 98 155-262 80-184 (276)
159 3mb5_A SAM-dependent methyltra 99.2 5E-12 1.7E-16 110.0 5.8 94 156-262 92-187 (255)
160 2ipx_A RRNA 2'-O-methyltransfe 99.2 7.6E-12 2.6E-16 107.9 6.9 95 155-262 75-175 (233)
161 4dzr_A Protein-(glutamine-N5) 99.2 3.1E-13 1.1E-17 113.3 -1.9 100 156-262 29-157 (215)
162 1wy7_A Hypothetical protein PH 99.2 1.1E-11 3.7E-16 104.4 7.7 93 157-259 49-141 (207)
163 1p91_A Ribosomal RNA large sub 99.2 7.1E-12 2.4E-16 109.9 6.7 86 157-262 85-171 (269)
164 3duw_A OMT, O-methyltransferas 99.2 6.5E-12 2.2E-16 107.2 6.1 96 157-262 58-160 (223)
165 2pwy_A TRNA (adenine-N(1)-)-me 99.2 7.3E-12 2.5E-16 108.6 6.5 95 156-262 95-191 (258)
166 3tfw_A Putative O-methyltransf 99.2 1.1E-11 3.8E-16 108.7 7.7 96 157-262 63-163 (248)
167 3dr5_A Putative O-methyltransf 99.2 5.9E-12 2E-16 109.2 5.8 95 158-262 57-156 (221)
168 2ld4_A Anamorsin; methyltransf 99.2 7.3E-13 2.5E-17 109.3 -0.0 82 154-262 9-94 (176)
169 3bzb_A Uncharacterized protein 99.2 1E-11 3.5E-16 111.0 7.2 101 157-260 79-191 (281)
170 3bwc_A Spermidine synthase; SA 99.2 3.7E-12 1.3E-16 115.6 4.2 103 157-262 95-203 (304)
171 2h00_A Methyltransferase 10 do 99.2 3.6E-12 1.2E-16 111.2 3.9 101 157-262 65-185 (254)
172 3c3p_A Methyltransferase; NP_9 99.2 9.4E-12 3.2E-16 105.5 6.3 95 157-262 56-153 (210)
173 1g8a_A Fibrillarin-like PRE-rR 99.2 1.6E-11 5.6E-16 105.1 7.9 95 155-262 71-171 (227)
174 4hc4_A Protein arginine N-meth 99.2 1.2E-11 4E-16 116.1 7.5 99 157-262 83-182 (376)
175 2pbf_A Protein-L-isoaspartate 99.2 3.9E-12 1.3E-16 108.9 3.8 98 156-262 79-186 (227)
176 3tr6_A O-methyltransferase; ce 99.2 5.4E-12 1.8E-16 107.6 4.6 96 157-262 64-167 (225)
177 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.3E-11 4.6E-16 107.6 7.0 101 157-262 49-166 (246)
178 2gpy_A O-methyltransferase; st 99.2 7.6E-12 2.6E-16 107.8 5.3 96 157-262 54-153 (233)
179 2nxc_A L11 mtase, ribosomal pr 99.2 5.3E-12 1.8E-16 111.3 4.2 92 157-262 120-211 (254)
180 1jg1_A PIMT;, protein-L-isoasp 99.2 5.4E-12 1.8E-16 109.1 4.2 93 156-262 90-182 (235)
181 2yvl_A TRMI protein, hypotheti 99.2 3.2E-11 1.1E-15 103.9 9.0 94 156-262 90-183 (248)
182 3tma_A Methyltransferase; thum 99.2 1E-11 3.6E-16 114.2 6.0 101 156-262 202-310 (354)
183 3a27_A TYW2, uncharacterized p 99.2 6.8E-12 2.3E-16 111.9 4.5 94 156-262 118-212 (272)
184 1i9g_A Hypothetical protein RV 99.2 1.1E-11 3.9E-16 109.2 5.8 96 156-262 98-196 (280)
185 1zg3_A Isoflavanone 4'-O-methy 99.2 8.2E-12 2.8E-16 114.9 5.1 88 157-261 193-282 (358)
186 1r18_A Protein-L-isoaspartate( 99.2 4.1E-12 1.4E-16 109.2 2.5 98 156-262 83-187 (227)
187 1zq9_A Probable dimethyladenos 99.2 2E-11 6.9E-16 109.7 7.0 76 156-239 27-102 (285)
188 1ej0_A FTSJ; methyltransferase 99.2 3.6E-12 1.2E-16 102.7 1.4 89 157-262 22-129 (180)
189 3giw_A Protein of unknown func 99.2 1.3E-11 4.4E-16 111.4 5.1 117 137-262 61-193 (277)
190 2cmg_A Spermidine synthase; tr 99.2 1.4E-11 4.7E-16 110.0 5.1 93 157-262 72-164 (262)
191 1u2z_A Histone-lysine N-methyl 99.2 2.3E-11 8E-16 116.0 7.0 101 155-262 240-352 (433)
192 2igt_A SAM dependent methyltra 99.2 1.6E-11 5.5E-16 113.0 5.4 101 157-262 153-265 (332)
193 1i1n_A Protein-L-isoaspartate 99.2 1.6E-11 5.5E-16 104.9 5.1 98 156-262 76-175 (226)
194 1sui_A Caffeoyl-COA O-methyltr 99.2 2.2E-11 7.5E-16 107.1 6.0 96 157-262 79-183 (247)
195 3r3h_A O-methyltransferase, SA 99.2 3E-12 1E-16 112.3 0.3 107 139-262 49-163 (242)
196 1xj5_A Spermidine synthase 1; 99.2 1.6E-11 5.4E-16 113.4 4.7 103 157-262 120-228 (334)
197 3gjy_A Spermidine synthase; AP 99.2 1.9E-11 6.3E-16 112.4 5.2 98 159-262 91-193 (317)
198 2hnk_A SAM-dependent O-methylt 99.2 1.8E-11 6.2E-16 106.0 4.7 96 157-262 60-174 (239)
199 1nv8_A HEMK protein; class I a 99.1 7.3E-11 2.5E-15 106.1 8.5 99 157-262 123-242 (284)
200 2bm8_A Cephalosporin hydroxyla 99.1 3.1E-11 1.1E-15 105.5 5.6 90 157-262 81-180 (236)
201 2o07_A Spermidine synthase; st 99.1 1.9E-11 6.4E-16 111.2 4.0 103 157-262 95-202 (304)
202 1mjf_A Spermidine synthase; sp 99.1 9.1E-12 3.1E-16 111.7 1.8 105 157-262 75-186 (281)
203 2i7c_A Spermidine synthase; tr 99.1 1.3E-11 4.5E-16 110.8 2.8 104 157-262 78-185 (283)
204 1o54_A SAM-dependent O-methylt 99.1 4.5E-11 1.6E-15 105.9 6.0 94 156-262 111-206 (277)
205 2qm3_A Predicted methyltransfe 99.1 7.6E-11 2.6E-15 109.6 7.6 96 157-262 172-270 (373)
206 3opn_A Putative hemolysin; str 99.1 1.3E-11 4.4E-16 108.1 2.2 93 157-262 37-130 (232)
207 2h1r_A Dimethyladenosine trans 99.1 5.8E-11 2E-15 107.5 6.5 87 156-252 41-127 (299)
208 1uir_A Polyamine aminopropyltr 99.1 1.6E-11 5.6E-16 111.9 2.8 105 157-262 77-188 (314)
209 2avd_A Catechol-O-methyltransf 99.1 2.3E-11 7.8E-16 104.0 3.5 96 157-262 69-172 (229)
210 1ixk_A Methyltransferase; open 99.1 6.4E-11 2.2E-15 107.9 6.3 101 156-262 117-239 (315)
211 1iy9_A Spermidine synthase; ro 99.1 2.3E-11 7.7E-16 109.0 3.2 104 157-262 75-182 (275)
212 3c3y_A Pfomt, O-methyltransfer 99.1 5.7E-11 1.9E-15 103.5 5.4 96 157-262 70-174 (237)
213 2b25_A Hypothetical protein; s 99.1 5.8E-11 2E-15 108.2 5.7 100 156-262 104-212 (336)
214 3gru_A Dimethyladenosine trans 99.1 8.9E-11 3E-15 106.7 6.7 76 156-240 49-124 (295)
215 2p41_A Type II methyltransfera 99.1 4.4E-11 1.5E-15 108.9 4.7 95 156-262 81-184 (305)
216 3cbg_A O-methyltransferase; cy 99.1 3.2E-11 1.1E-15 104.6 3.6 96 157-262 72-175 (232)
217 2b2c_A Spermidine synthase; be 99.1 2.5E-11 8.6E-16 111.0 2.8 104 157-262 108-215 (314)
218 2pt6_A Spermidine synthase; tr 99.1 3.4E-11 1.2E-15 110.3 3.3 103 157-262 116-223 (321)
219 3tm4_A TRNA (guanine N2-)-meth 99.1 6.7E-11 2.3E-15 110.2 5.4 97 157-259 217-321 (373)
220 3frh_A 16S rRNA methylase; met 99.1 1.1E-10 3.9E-15 103.6 6.5 95 157-262 105-199 (253)
221 2plw_A Ribosomal RNA methyltra 99.1 6.5E-11 2.2E-15 99.0 4.7 90 156-262 21-147 (201)
222 3hp7_A Hemolysin, putative; st 99.1 2.6E-11 8.9E-16 110.2 2.3 91 157-262 85-178 (291)
223 1qam_A ERMC' methyltransferase 99.1 1.4E-10 4.7E-15 101.9 6.6 72 156-237 29-101 (244)
224 3lcv_B Sisomicin-gentamicin re 99.1 1.1E-10 3.9E-15 104.7 5.6 97 157-262 132-229 (281)
225 3id6_C Fibrillarin-like rRNA/T 99.0 3E-10 1E-14 99.9 7.8 96 154-262 73-174 (232)
226 1inl_A Spermidine synthase; be 99.0 8.7E-11 3E-15 106.2 4.4 104 157-262 90-198 (296)
227 3ajd_A Putative methyltransfer 99.0 1.3E-10 4.5E-15 103.4 4.9 101 156-262 82-204 (274)
228 2b78_A Hypothetical protein SM 99.0 8.9E-11 3E-15 109.9 3.7 101 157-262 212-324 (385)
229 3fut_A Dimethyladenosine trans 99.0 2.7E-10 9.4E-15 102.3 6.7 86 156-253 46-132 (271)
230 3gnl_A Uncharacterized protein 99.0 2.7E-10 9.1E-15 101.1 6.4 96 157-261 21-117 (244)
231 3tqs_A Ribosomal RNA small sub 99.0 3E-10 1E-14 101.1 6.5 86 156-252 28-117 (255)
232 3k6r_A Putative transferase PH 99.0 4.1E-10 1.4E-14 101.6 6.7 94 157-262 125-218 (278)
233 3kr9_A SAM-dependent methyltra 99.0 3.6E-10 1.2E-14 99.1 5.8 96 157-262 15-112 (225)
234 1yub_A Ermam, rRNA methyltrans 99.0 1.3E-11 4.5E-16 108.0 -3.5 95 156-262 28-138 (245)
235 2as0_A Hypothetical protein PH 99.0 1.2E-10 4.1E-15 108.9 2.7 101 157-262 217-328 (396)
236 2yxl_A PH0851 protein, 450AA l 99.0 1.1E-09 3.8E-14 104.3 9.3 101 156-262 258-382 (450)
237 1wxx_A TT1595, hypothetical pr 99.0 1E-10 3.4E-15 109.1 1.4 99 157-262 209-318 (382)
238 3lec_A NADB-rossmann superfami 99.0 6.9E-10 2.4E-14 97.6 6.6 96 157-261 21-117 (230)
239 4dmg_A Putative uncharacterize 99.0 2.1E-10 7.3E-15 108.0 3.6 98 157-262 214-319 (393)
240 2f8l_A Hypothetical protein LM 99.0 2.7E-10 9.2E-15 104.5 4.2 98 157-262 130-249 (344)
241 2nyu_A Putative ribosomal RNA 99.0 1.6E-10 5.4E-15 96.1 2.2 90 156-262 21-138 (196)
242 3sso_A Methyltransferase; macr 99.0 1.9E-10 6.6E-15 108.8 3.0 88 157-262 216-317 (419)
243 2jjq_A Uncharacterized RNA met 98.9 2.2E-09 7.4E-14 102.0 9.8 91 157-262 290-380 (425)
244 3c0k_A UPF0064 protein YCCW; P 98.9 2.4E-10 8.2E-15 106.9 3.1 101 157-262 220-332 (396)
245 1uwv_A 23S rRNA (uracil-5-)-me 98.9 2.5E-09 8.7E-14 101.4 9.0 76 157-239 286-365 (433)
246 2frx_A Hypothetical protein YE 98.9 1.9E-09 6.5E-14 104.0 8.1 100 157-262 117-239 (479)
247 2yx1_A Hypothetical protein MJ 98.9 7.1E-10 2.4E-14 101.8 4.5 90 157-262 195-284 (336)
248 3v97_A Ribosomal RNA large sub 98.9 5.5E-10 1.9E-14 112.3 4.0 102 157-262 539-650 (703)
249 1sqg_A SUN protein, FMU protei 98.9 2.4E-09 8.1E-14 101.3 7.2 100 156-262 245-367 (429)
250 3dou_A Ribosomal RNA large sub 98.9 9.7E-10 3.3E-14 93.0 3.6 89 156-262 24-132 (191)
251 3m6w_A RRNA methylase; rRNA me 98.8 1.3E-09 4.3E-14 104.9 3.9 100 156-262 100-222 (464)
252 2r6z_A UPF0341 protein in RSP 98.8 9.7E-10 3.3E-14 97.8 1.0 80 157-242 83-173 (258)
253 3ldu_A Putative methylase; str 98.8 3.9E-09 1.3E-13 98.9 4.9 100 156-261 194-334 (385)
254 3k0b_A Predicted N6-adenine-sp 98.8 4.6E-09 1.6E-13 98.8 4.9 100 156-261 200-340 (393)
255 3bt7_A TRNA (uracil-5-)-methyl 98.7 2.7E-09 9.3E-14 99.0 2.7 75 158-239 214-304 (369)
256 2ih2_A Modification methylase 98.7 2.4E-09 8.2E-14 99.6 2.4 90 157-262 39-157 (421)
257 3ldg_A Putative uncharacterize 98.7 1.1E-08 3.8E-13 96.0 6.8 100 156-261 193-333 (384)
258 3uzu_A Ribosomal RNA small sub 98.7 7.2E-09 2.5E-13 93.3 4.8 73 156-239 41-123 (279)
259 3ftd_A Dimethyladenosine trans 98.7 9.6E-09 3.3E-13 90.8 5.2 78 156-246 30-110 (249)
260 1m6y_A S-adenosyl-methyltransf 98.7 3.5E-09 1.2E-13 96.4 2.2 75 157-238 26-106 (301)
261 3m4x_A NOL1/NOP2/SUN family pr 98.7 6E-09 2.1E-13 100.0 3.9 101 156-262 104-227 (456)
262 2okc_A Type I restriction enzy 98.7 9.7E-09 3.3E-13 97.5 5.2 101 157-262 171-300 (445)
263 2oyr_A UPF0341 protein YHIQ; a 98.7 3.2E-09 1.1E-13 94.8 1.6 83 159-242 90-176 (258)
264 1qyr_A KSGA, high level kasuga 98.6 7.8E-09 2.7E-13 91.6 2.5 73 156-239 20-99 (252)
265 2qfm_A Spermine synthase; sper 98.6 1.3E-08 4.3E-13 95.0 3.6 103 157-262 188-307 (364)
266 3ll7_A Putative methyltransfer 98.6 1.4E-08 4.7E-13 96.2 3.2 77 157-238 93-171 (410)
267 2b9e_A NOL1/NOP2/SUN domain fa 98.4 3.3E-07 1.1E-11 83.4 6.9 75 156-236 101-180 (309)
268 2xyq_A Putative 2'-O-methyl tr 98.4 1.6E-07 5.5E-12 85.0 3.6 86 155-262 61-164 (290)
269 3evf_A RNA-directed RNA polyme 98.3 2E-07 6.7E-12 83.9 3.5 109 142-262 63-176 (277)
270 2dul_A N(2),N(2)-dimethylguano 98.3 1.4E-07 4.9E-12 88.2 2.5 99 158-262 48-157 (378)
271 3axs_A Probable N(2),N(2)-dime 98.3 2.1E-07 7.2E-12 87.6 3.1 95 157-262 52-151 (392)
272 3gcz_A Polyprotein; flavivirus 98.2 1.7E-07 5.7E-12 84.5 0.9 107 142-262 79-192 (282)
273 3v97_A Ribosomal RNA large sub 98.2 7.9E-07 2.7E-11 89.4 5.9 99 157-260 190-335 (703)
274 4gqb_A Protein arginine N-meth 98.2 1.4E-06 4.9E-11 86.5 6.5 97 158-262 358-460 (637)
275 2ar0_A M.ecoki, type I restric 98.2 1E-06 3.6E-11 85.9 5.2 100 157-262 169-305 (541)
276 3o4f_A Spermidine synthase; am 98.2 2.7E-06 9.2E-11 77.2 7.1 102 157-262 83-191 (294)
277 3ua3_A Protein arginine N-meth 98.1 1E-06 3.5E-11 88.3 2.1 98 158-262 410-527 (745)
278 3cvo_A Methyltransferase-like 98.0 3.9E-05 1.3E-09 66.0 10.3 103 138-262 20-147 (202)
279 2k4m_A TR8_protein, UPF0146 pr 98.0 2.8E-06 9.4E-11 69.9 2.5 75 157-257 35-111 (153)
280 3b5i_A S-adenosyl-L-methionine 97.9 9.3E-06 3.2E-10 76.0 5.7 106 157-262 52-218 (374)
281 1wg8_A Predicted S-adenosylmet 97.8 1.2E-05 4E-10 72.6 4.7 81 156-247 21-108 (285)
282 4auk_A Ribosomal RNA large sub 97.8 2E-05 6.8E-10 73.7 6.4 71 155-239 209-279 (375)
283 3lkz_A Non-structural protein 97.8 4.6E-05 1.6E-09 69.2 7.9 171 64-262 10-196 (321)
284 2efj_A 3,7-dimethylxanthine me 97.8 2.2E-05 7.6E-10 73.6 6.1 81 158-246 53-165 (384)
285 3lkd_A Type I restriction-modi 97.8 2.3E-05 7.9E-10 76.6 6.0 101 157-262 221-351 (542)
286 3s1s_A Restriction endonucleas 97.8 2.7E-05 9.3E-10 79.2 6.5 82 157-240 321-409 (878)
287 3eld_A Methyltransferase; flav 97.7 2.7E-05 9.3E-10 70.6 4.8 98 155-262 79-183 (300)
288 3c6k_A Spermine synthase; sper 97.7 1.7E-05 5.8E-10 74.3 3.4 106 157-262 205-324 (381)
289 3khk_A Type I restriction-modi 97.6 2E-05 7E-10 76.9 2.9 99 158-262 245-388 (544)
290 2px2_A Genome polyprotein [con 97.6 3.9E-05 1.3E-09 68.3 4.2 107 142-262 62-175 (269)
291 1m6e_X S-adenosyl-L-methionnin 97.6 4.7E-05 1.6E-09 70.8 4.2 101 157-262 51-202 (359)
292 2qy6_A UPF0209 protein YFCK; s 97.5 2.9E-05 9.8E-10 68.9 2.5 104 157-262 60-206 (257)
293 2zig_A TTHA0409, putative modi 97.5 0.00014 4.8E-09 65.2 6.7 46 157-203 235-280 (297)
294 3p8z_A Mtase, non-structural p 97.4 7.5E-05 2.6E-09 65.9 3.6 84 142-238 67-152 (267)
295 1i4w_A Mitochondrial replicati 97.1 0.00065 2.2E-08 62.9 6.3 59 158-225 59-118 (353)
296 2vz8_A Fatty acid synthase; tr 96.6 0.00022 7.4E-09 80.5 -1.4 95 157-262 1240-1341(2512)
297 1g60_A Adenine-specific methyl 96.5 0.0046 1.6E-07 54.1 7.0 45 157-202 212-256 (260)
298 3ufb_A Type I restriction-modi 96.3 0.0083 2.8E-07 58.2 7.9 107 140-260 207-346 (530)
299 4fzv_A Putative methyltransfer 96.2 0.0055 1.9E-07 56.8 5.6 107 155-262 146-277 (359)
300 2wk1_A NOVP; transferase, O-me 95.7 0.0063 2.2E-07 54.6 3.8 98 157-262 106-237 (282)
301 3g7u_A Cytosine-specific methy 95.6 0.011 3.9E-07 54.8 5.2 70 159-239 3-80 (376)
302 1g55_A DNA cytosine methyltran 95.4 0.0044 1.5E-07 56.7 1.7 70 159-239 3-77 (343)
303 1rjd_A PPM1P, carboxy methyl t 95.2 0.027 9.3E-07 51.4 6.1 102 158-260 98-224 (334)
304 3tka_A Ribosomal RNA small sub 95.2 0.026 9E-07 52.0 5.9 82 156-247 56-147 (347)
305 2py6_A Methyltransferase FKBM; 95.1 0.024 8.2E-07 53.0 5.4 47 156-202 225-274 (409)
306 2c7p_A Modification methylase 94.4 0.025 8.7E-07 51.4 3.6 68 158-238 11-79 (327)
307 2oo3_A Protein involved in cat 94.0 0.016 5.3E-07 52.2 1.4 76 158-242 92-171 (283)
308 2uyo_A Hypothetical protein ML 93.8 0.2 6.7E-06 45.2 8.3 99 159-262 104-211 (310)
309 1boo_A Protein (N-4 cytosine-s 92.5 0.25 8.6E-06 44.5 7.0 46 157-203 252-297 (323)
310 3qv2_A 5-cytosine DNA methyltr 91.0 0.12 4.1E-06 47.0 3.0 70 157-238 9-84 (327)
311 1eg2_A Modification methylase 89.2 0.57 1.9E-05 42.3 6.0 46 157-203 242-290 (319)
312 4h0n_A DNMT2; SAH binding, tra 88.9 0.14 4.7E-06 46.7 1.7 70 158-238 3-77 (333)
313 1zkd_A DUF185; NESG, RPR58, st 88.3 0.65 2.2E-05 43.3 5.8 45 157-201 80-132 (387)
314 2qrv_A DNA (cytosine-5)-methyl 88.0 0.31 1.1E-05 43.7 3.3 71 157-238 15-91 (295)
315 3r24_A NSP16, 2'-O-methyl tran 87.4 0.33 1.1E-05 44.1 3.1 85 156-262 108-210 (344)
316 3ubt_Y Modification methylase 86.1 0.55 1.9E-05 41.7 3.8 67 160-238 2-69 (331)
317 2dph_A Formaldehyde dismutase; 85.2 1.1 3.9E-05 40.8 5.7 44 155-198 183-228 (398)
318 4f3n_A Uncharacterized ACR, CO 84.7 0.65 2.2E-05 44.0 3.8 44 158-201 138-187 (432)
319 1lss_A TRK system potassium up 83.4 6.1 0.00021 29.4 8.3 38 159-198 5-45 (140)
320 1f8f_A Benzyl alcohol dehydrog 81.1 2.2 7.5E-05 38.4 5.7 45 155-199 188-234 (371)
321 3s2e_A Zinc-containing alcohol 80.7 2.9 9.8E-05 37.1 6.3 45 155-199 164-209 (340)
322 1pl8_A Human sorbitol dehydrog 79.4 3.1 0.00011 37.2 6.1 45 155-199 169-215 (356)
323 1pqw_A Polyketide synthase; ro 79.0 2.3 8E-05 34.3 4.8 44 155-198 36-81 (198)
324 3fwz_A Inner membrane protein 78.6 9 0.00031 29.3 7.9 67 158-237 7-78 (140)
325 1kol_A Formaldehyde dehydrogen 77.3 3.8 0.00013 37.2 6.1 45 155-199 183-229 (398)
326 1uuf_A YAHK, zinc-type alcohol 75.4 3.9 0.00013 37.0 5.6 44 155-198 192-236 (369)
327 1v3u_A Leukotriene B4 12- hydr 73.9 4.7 0.00016 35.5 5.7 44 155-198 143-188 (333)
328 1e3j_A NADP(H)-dependent ketos 73.9 5.4 0.00018 35.5 6.1 45 155-199 166-211 (352)
329 3two_A Mannitol dehydrogenase; 73.4 3.5 0.00012 36.6 4.7 45 155-199 174-219 (348)
330 3me5_A Cytosine-specific methy 73.3 1.4 5E-05 42.1 2.2 60 158-225 88-147 (482)
331 3ius_A Uncharacterized conserv 73.1 8.9 0.0003 32.3 7.1 82 159-257 6-90 (286)
332 2hcy_A Alcohol dehydrogenase 1 72.7 4 0.00014 36.2 4.9 44 155-198 167-212 (347)
333 3llv_A Exopolyphosphatase-rela 72.1 13 0.00044 28.0 7.2 64 159-237 7-77 (141)
334 2j3h_A NADP-dependent oxidored 71.9 5.3 0.00018 35.3 5.5 46 155-200 153-200 (345)
335 3fpc_A NADP-dependent alcohol 71.4 6 0.0002 35.2 5.8 45 155-199 164-210 (352)
336 2eih_A Alcohol dehydrogenase; 71.2 6.6 0.00023 34.7 6.0 44 155-198 164-209 (343)
337 3l9w_A Glutathione-regulated p 69.7 9.5 0.00032 35.4 6.9 65 158-237 4-75 (413)
338 3uog_A Alcohol dehydrogenase; 69.7 7.5 0.00026 34.8 6.1 45 155-199 187-232 (363)
339 1jvb_A NAD(H)-dependent alcoho 69.2 6.7 0.00023 34.8 5.6 44 155-198 168-214 (347)
340 1cdo_A Alcohol dehydrogenase; 69.1 6.5 0.00022 35.3 5.5 45 155-199 190-236 (374)
341 2h6e_A ADH-4, D-arabinose 1-de 68.8 6.6 0.00023 34.8 5.4 43 157-199 170-215 (344)
342 1rjw_A ADH-HT, alcohol dehydro 68.2 8.9 0.0003 33.9 6.2 44 155-198 162-206 (339)
343 4b7c_A Probable oxidoreductase 67.6 7 0.00024 34.4 5.3 44 155-198 147-192 (336)
344 1p0f_A NADP-dependent alcohol 67.4 6.6 0.00023 35.2 5.2 45 155-199 189-235 (373)
345 3gms_A Putative NADPH:quinone 67.3 4.9 0.00017 35.5 4.3 45 155-199 142-188 (340)
346 3jv7_A ADH-A; dehydrogenase, n 66.6 8.6 0.0003 34.0 5.7 45 155-199 169-215 (345)
347 1piw_A Hypothetical zinc-type 66.5 5.9 0.0002 35.4 4.6 44 155-198 177-221 (360)
348 2jhf_A Alcohol dehydrogenase E 66.4 7.9 0.00027 34.7 5.5 44 155-198 189-234 (374)
349 2fzw_A Alcohol dehydrogenase c 66.0 7.3 0.00025 34.8 5.2 45 155-199 188-234 (373)
350 3m6i_A L-arabinitol 4-dehydrog 65.7 10 0.00034 33.8 6.0 45 155-199 177-223 (363)
351 1e3i_A Alcohol dehydrogenase, 65.2 8.6 0.00029 34.5 5.5 45 155-199 193-239 (376)
352 4ej6_A Putative zinc-binding d 65.0 10 0.00034 34.1 5.9 45 155-199 180-226 (370)
353 3swr_A DNA (cytosine-5)-methyl 64.9 3.4 0.00012 43.1 3.0 45 157-201 539-584 (1002)
354 1iz0_A Quinone oxidoreductase; 64.6 5.9 0.0002 34.3 4.2 43 156-198 124-168 (302)
355 4g65_A TRK system potassium up 64.5 9.7 0.00033 35.8 5.9 53 158-224 3-58 (461)
356 3uko_A Alcohol dehydrogenase c 62.8 8 0.00027 34.8 4.8 45 155-199 191-237 (378)
357 3pvc_A TRNA 5-methylaminomethy 62.7 1.5 5.2E-05 43.1 -0.1 105 157-262 58-204 (689)
358 3abi_A Putative uncharacterize 62.7 5.4 0.00018 35.9 3.6 67 157-238 15-85 (365)
359 1vj0_A Alcohol dehydrogenase, 60.4 13 0.00045 33.4 5.8 44 155-198 193-238 (380)
360 1yb5_A Quinone oxidoreductase; 60.3 13 0.00043 33.2 5.6 44 155-198 168-213 (351)
361 3c85_A Putative glutathione-re 59.9 22 0.00076 28.0 6.6 41 158-198 39-81 (183)
362 4eye_A Probable oxidoreductase 59.8 11 0.00036 33.5 5.0 45 155-199 157-203 (342)
363 3l4b_C TRKA K+ channel protien 59.0 17 0.00058 29.7 5.9 64 160-237 2-72 (218)
364 1qor_A Quinone oxidoreductase; 59.0 12 0.00041 32.7 5.2 44 155-198 138-183 (327)
365 1id1_A Putative potassium chan 58.7 21 0.00072 27.4 6.1 67 159-237 4-78 (153)
366 2d8a_A PH0655, probable L-thre 58.5 14 0.00047 32.7 5.5 43 157-199 167-211 (348)
367 2c0c_A Zinc binding alcohol de 57.9 15 0.00052 32.7 5.8 44 155-198 161-206 (362)
368 3ip1_A Alcohol dehydrogenase, 57.8 16 0.00054 33.2 5.9 45 155-199 211-257 (404)
369 3qwb_A Probable quinone oxidor 57.4 15 0.0005 32.2 5.5 45 155-199 146-192 (334)
370 3jyn_A Quinone oxidoreductase; 56.8 13 0.00046 32.4 5.1 45 155-199 138-184 (325)
371 2j8z_A Quinone oxidoreductase; 56.7 15 0.00052 32.6 5.5 44 155-198 160-205 (354)
372 2aef_A Calcium-gated potassium 55.6 20 0.00068 29.6 5.8 63 158-237 9-78 (234)
373 2zig_A TTHA0409, putative modi 55.3 1.7 5.7E-05 38.3 -1.2 50 213-262 21-90 (297)
374 2dq4_A L-threonine 3-dehydroge 53.9 11 0.00038 33.3 4.1 43 157-199 164-208 (343)
375 3goh_A Alcohol dehydrogenase, 52.7 11 0.00039 32.7 3.9 44 155-199 140-184 (315)
376 4fgs_A Probable dehydrogenase 52.6 40 0.0014 29.3 7.4 92 129-238 7-111 (273)
377 3ps9_A TRNA 5-methylaminomethy 52.6 4.8 0.00017 39.3 1.6 104 158-262 67-212 (676)
378 4dup_A Quinone oxidoreductase; 52.0 20 0.00067 31.8 5.4 45 155-199 165-211 (353)
379 1wly_A CAAR, 2-haloacrylate re 51.5 23 0.00077 31.0 5.7 44 155-198 143-188 (333)
380 2zb4_A Prostaglandin reductase 47.6 26 0.00088 30.9 5.5 46 155-200 156-206 (357)
381 1xa0_A Putative NADPH dependen 46.8 14 0.00049 32.2 3.6 42 157-198 148-192 (328)
382 2cf5_A Atccad5, CAD, cinnamyl 46.7 23 0.0008 31.4 5.1 44 157-200 180-224 (357)
383 3iei_A Leucine carboxyl methyl 46.3 37 0.0013 30.5 6.4 104 158-261 91-222 (334)
384 3ggo_A Prephenate dehydrogenas 45.6 65 0.0022 28.2 7.8 83 159-262 34-121 (314)
385 3e8x_A Putative NAD-dependent 45.0 34 0.0012 27.8 5.5 68 158-239 21-93 (236)
386 1yqd_A Sinapyl alcohol dehydro 44.9 32 0.0011 30.6 5.7 44 157-200 187-231 (366)
387 4gx0_A TRKA domain protein; me 44.8 36 0.0012 32.2 6.4 65 158-236 127-198 (565)
388 3qiv_A Short-chain dehydrogena 44.5 66 0.0023 26.4 7.3 73 158-238 9-94 (253)
389 3mag_A VP39; methylated adenin 43.3 20 0.0007 32.2 4.0 34 158-192 61-100 (307)
390 1h2b_A Alcohol dehydrogenase; 42.9 37 0.0013 30.1 5.7 44 155-198 184-229 (359)
391 2ew2_A 2-dehydropantoate 2-red 42.6 91 0.0031 26.3 8.1 39 160-199 5-45 (316)
392 3ic5_A Putative saccharopine d 42.6 81 0.0028 22.1 6.7 66 158-238 5-77 (118)
393 3o38_A Short chain dehydrogena 42.5 76 0.0026 26.3 7.5 75 158-239 22-110 (266)
394 4fs3_A Enoyl-[acyl-carrier-pro 41.2 80 0.0028 26.4 7.4 73 158-237 6-93 (256)
395 1tt7_A YHFP; alcohol dehydroge 41.1 19 0.00063 31.5 3.4 42 157-198 149-193 (330)
396 4fn4_A Short chain dehydrogena 40.3 46 0.0016 28.6 5.8 73 158-238 7-92 (254)
397 3h7a_A Short chain dehydrogena 39.1 69 0.0023 26.6 6.6 73 158-238 7-91 (252)
398 3krt_A Crotonyl COA reductase; 39.0 36 0.0012 31.3 5.2 45 155-199 226-272 (456)
399 4a0s_A Octenoyl-COA reductase/ 38.9 37 0.0012 31.1 5.2 44 155-198 218-263 (447)
400 2g1u_A Hypothetical protein TM 38.9 20 0.00067 27.7 2.9 40 157-196 18-58 (155)
401 1lnq_A MTHK channels, potassiu 38.5 30 0.001 30.3 4.4 62 159-237 116-184 (336)
402 3gaz_A Alcohol dehydrogenase s 38.5 38 0.0013 29.8 5.1 44 155-199 148-193 (343)
403 3lyl_A 3-oxoacyl-(acyl-carrier 38.5 90 0.0031 25.4 7.2 73 158-238 5-90 (247)
404 3d1l_A Putative NADP oxidoredu 38.2 75 0.0026 26.5 6.8 82 159-262 11-95 (266)
405 3nx4_A Putative oxidoreductase 37.8 31 0.001 29.9 4.3 40 160-199 149-190 (324)
406 3o26_A Salutaridine reductase; 37.8 92 0.0031 26.0 7.3 75 158-239 12-100 (311)
407 3tjr_A Short chain dehydrogena 37.1 97 0.0033 26.5 7.4 73 158-238 31-116 (301)
408 2cdc_A Glucose dehydrogenase g 36.9 38 0.0013 30.1 4.8 41 158-198 181-225 (366)
409 3ado_A Lambda-crystallin; L-gu 36.7 46 0.0016 29.7 5.3 43 158-201 6-50 (319)
410 4eez_A Alcohol dehydrogenase 1 36.7 61 0.0021 28.2 6.1 46 155-200 161-208 (348)
411 3imf_A Short chain dehydrogena 36.4 1E+02 0.0035 25.5 7.4 73 158-238 6-91 (257)
412 3ucx_A Short chain dehydrogena 36.3 1.1E+02 0.0037 25.5 7.5 73 158-238 11-96 (264)
413 3rkr_A Short chain oxidoreduct 36.1 1E+02 0.0034 25.6 7.2 73 158-238 29-114 (262)
414 3ppi_A 3-hydroxyacyl-COA dehyd 35.4 1E+02 0.0036 25.7 7.3 69 158-237 30-110 (281)
415 2b5w_A Glucose dehydrogenase; 33.9 38 0.0013 29.9 4.3 40 159-198 174-220 (357)
416 3av4_A DNA (cytosine-5)-methyl 33.4 30 0.001 37.1 4.0 44 158-201 851-895 (1330)
417 3n74_A 3-ketoacyl-(acyl-carrie 32.6 1.3E+02 0.0046 24.6 7.4 70 158-238 9-91 (261)
418 3sju_A Keto reductase; short-c 32.5 1.3E+02 0.0045 25.3 7.4 73 158-238 24-109 (279)
419 1pjc_A Protein (L-alanine dehy 32.1 9.8 0.00033 34.4 0.0 43 158-200 167-210 (361)
420 4e6p_A Probable sorbitol dehyd 31.7 1.4E+02 0.0049 24.6 7.5 70 158-238 8-90 (259)
421 3f9i_A 3-oxoacyl-[acyl-carrier 31.5 1.3E+02 0.0043 24.5 7.0 71 157-238 13-92 (249)
422 3iup_A Putative NADPH:quinone 31.4 53 0.0018 29.4 4.9 42 157-198 170-214 (379)
423 4dcm_A Ribosomal RNA large sub 31.3 61 0.0021 29.3 5.3 91 158-262 39-129 (375)
424 1xu9_A Corticosteroid 11-beta- 31.2 1.1E+02 0.0038 25.7 6.7 73 158-237 28-113 (286)
425 3op4_A 3-oxoacyl-[acyl-carrier 30.9 1.5E+02 0.005 24.4 7.4 70 158-238 9-91 (248)
426 3fbg_A Putative arginate lyase 30.4 72 0.0025 27.9 5.5 43 157-199 150-194 (346)
427 2f1k_A Prephenate dehydrogenas 30.3 1.2E+02 0.0043 25.2 6.9 81 160-262 2-84 (279)
428 4a2c_A Galactitol-1-phosphate 30.2 90 0.0031 27.0 6.1 45 155-199 158-204 (346)
429 2hmt_A YUAA protein; RCK, KTN, 29.7 84 0.0029 22.8 5.1 36 158-195 6-44 (144)
430 3pk0_A Short-chain dehydrogena 29.2 1.5E+02 0.0051 24.6 7.2 74 158-238 10-96 (262)
431 4hp8_A 2-deoxy-D-gluconate 3-d 29.2 75 0.0026 27.2 5.3 85 158-252 9-107 (247)
432 4ft4_B DNA (cytosine-5)-methyl 29.0 34 0.0012 34.0 3.4 45 157-201 211-261 (784)
433 4eso_A Putative oxidoreductase 28.7 1.8E+02 0.0062 24.0 7.6 70 158-238 8-90 (255)
434 3svt_A Short-chain type dehydr 28.6 1.7E+02 0.0058 24.4 7.5 76 158-238 11-99 (281)
435 3zv4_A CIS-2,3-dihydrobiphenyl 28.6 1.8E+02 0.0061 24.4 7.6 70 158-238 5-87 (281)
436 3r1i_A Short-chain type dehydr 28.5 1.2E+02 0.0041 25.6 6.5 73 158-238 32-117 (276)
437 3hwr_A 2-dehydropantoate 2-red 28.2 1.8E+02 0.006 25.2 7.7 91 158-262 19-113 (318)
438 3awd_A GOX2181, putative polyo 28.1 1.8E+02 0.0062 23.5 7.4 73 158-238 13-98 (260)
439 4dvj_A Putative zinc-dependent 28.1 63 0.0021 28.7 4.8 42 157-198 171-215 (363)
440 3v8b_A Putative dehydrogenase, 28.0 2E+02 0.0069 24.2 7.9 73 158-238 28-113 (283)
441 4g81_D Putative hexonate dehyd 27.8 55 0.0019 28.1 4.2 86 158-251 9-113 (255)
442 3hn7_A UDP-N-acetylmuramate-L- 27.7 97 0.0033 29.2 6.2 77 158-250 19-99 (524)
443 3tri_A Pyrroline-5-carboxylate 27.6 64 0.0022 27.7 4.6 40 159-199 4-48 (280)
444 2jah_A Clavulanic acid dehydro 27.5 2E+02 0.0067 23.5 7.6 73 158-238 7-92 (247)
445 3gvc_A Oxidoreductase, probabl 27.2 1.6E+02 0.0053 24.9 7.0 70 158-238 29-111 (277)
446 3lk7_A UDP-N-acetylmuramoylala 27.0 1E+02 0.0035 28.3 6.1 69 158-240 9-82 (451)
447 3pxx_A Carveol dehydrogenase; 27.0 1.7E+02 0.0056 24.3 7.1 74 158-239 10-108 (287)
448 2vn8_A Reticulon-4-interacting 26.6 78 0.0027 28.0 5.1 43 155-198 181-225 (375)
449 3l77_A Short-chain alcohol deh 26.1 1.7E+02 0.0057 23.5 6.8 73 160-239 4-89 (235)
450 1fmc_A 7 alpha-hydroxysteroid 26.0 1.8E+02 0.0061 23.5 7.0 73 158-238 11-96 (255)
451 1yb1_A 17-beta-hydroxysteroid 25.9 2E+02 0.0069 23.8 7.4 73 158-238 31-116 (272)
452 2rhc_B Actinorhodin polyketide 25.7 2E+02 0.0069 24.0 7.4 73 158-238 22-107 (277)
453 3sx2_A Putative 3-ketoacyl-(ac 25.5 1.9E+02 0.0066 23.9 7.3 75 158-240 13-112 (278)
454 3rih_A Short chain dehydrogena 25.5 1.4E+02 0.0049 25.4 6.5 74 158-238 41-127 (293)
455 2ae2_A Protein (tropinone redu 25.5 2.2E+02 0.0074 23.3 7.5 73 158-238 9-95 (260)
456 3tox_A Short chain dehydrogena 25.4 1.2E+02 0.004 25.7 5.9 73 158-238 8-93 (280)
457 3tfo_A Putative 3-oxoacyl-(acy 24.8 1.2E+02 0.004 25.6 5.7 73 158-238 4-89 (264)
458 3gaf_A 7-alpha-hydroxysteroid 24.8 1.1E+02 0.0038 25.3 5.5 73 158-238 12-97 (256)
459 3vrd_B FCCB subunit, flavocyto 24.7 48 0.0016 29.3 3.3 33 158-191 2-38 (401)
460 1zem_A Xylitol dehydrogenase; 24.6 2.4E+02 0.0081 23.2 7.6 73 158-238 7-92 (262)
461 1nff_A Putative oxidoreductase 24.6 2.5E+02 0.0084 23.2 7.7 70 158-238 7-89 (260)
462 3lf2_A Short chain oxidoreduct 24.6 2.3E+02 0.0078 23.4 7.5 75 158-238 8-95 (265)
463 3dii_A Short-chain dehydrogena 24.6 2.2E+02 0.0076 23.2 7.4 67 160-238 4-83 (247)
464 1iy8_A Levodione reductase; ox 24.1 1.8E+02 0.0061 24.0 6.7 75 158-238 13-100 (267)
465 4fc7_A Peroxisomal 2,4-dienoyl 23.9 1.7E+02 0.0058 24.5 6.6 74 158-238 27-113 (277)
466 1xkq_A Short-chain reductase f 23.9 2.1E+02 0.0071 23.8 7.2 76 158-238 6-94 (280)
467 4dqx_A Probable oxidoreductase 23.9 2.3E+02 0.0077 23.8 7.4 70 158-238 27-109 (277)
468 3iht_A S-adenosyl-L-methionine 23.3 1.6E+02 0.0054 24.1 5.8 29 158-187 41-71 (174)
469 3grp_A 3-oxoacyl-(acyl carrier 23.2 2.2E+02 0.0077 23.6 7.2 70 158-238 27-109 (266)
470 3gt0_A Pyrroline-5-carboxylate 23.1 25 0.00085 29.4 1.0 39 160-199 4-48 (247)
471 1ae1_A Tropinone reductase-I; 23.1 2.6E+02 0.0087 23.2 7.6 73 158-238 21-107 (273)
472 2dpo_A L-gulonate 3-dehydrogen 23.0 1E+02 0.0035 27.2 5.1 41 159-200 7-49 (319)
473 3dfz_A SIRC, precorrin-2 dehyd 23.0 1.3E+02 0.0045 25.2 5.6 66 157-237 30-98 (223)
474 3uve_A Carveol dehydrogenase ( 23.0 2.7E+02 0.0091 23.2 7.7 73 158-238 11-112 (286)
475 2a4k_A 3-oxoacyl-[acyl carrier 22.9 2.7E+02 0.0091 23.0 7.6 71 158-239 6-89 (263)
476 2wsb_A Galactitol dehydrogenas 22.7 2.8E+02 0.0096 22.2 7.6 70 158-238 11-93 (254)
477 3t7c_A Carveol dehydrogenase; 22.5 2.5E+02 0.0087 23.7 7.5 73 158-238 28-125 (299)
478 3guy_A Short-chain dehydrogena 22.4 1.3E+02 0.0046 24.1 5.5 67 161-238 4-80 (230)
479 1geg_A Acetoin reductase; SDR 22.4 2.5E+02 0.0086 22.9 7.3 71 160-238 4-87 (256)
480 3ged_A Short-chain dehydrogena 22.4 1.4E+02 0.0048 25.3 5.7 81 160-252 4-103 (247)
481 4dio_A NAD(P) transhydrogenase 22.3 99 0.0034 28.6 5.0 42 157-198 189-231 (405)
482 1zcj_A Peroxisomal bifunctiona 22.2 96 0.0033 28.8 5.0 41 158-199 37-79 (463)
483 3c24_A Putative oxidoreductase 22.2 2.1E+02 0.0072 24.0 6.9 79 160-262 13-94 (286)
484 3nyw_A Putative oxidoreductase 22.2 2.5E+02 0.0087 23.0 7.3 77 158-239 7-96 (250)
485 3grk_A Enoyl-(acyl-carrier-pro 22.1 2.3E+02 0.0077 24.0 7.1 72 158-238 31-117 (293)
486 3g0o_A 3-hydroxyisobutyrate de 22.1 1.3E+02 0.0043 25.8 5.5 40 159-199 8-49 (303)
487 3eag_A UDP-N-acetylmuramate:L- 22.1 1.4E+02 0.0048 26.0 5.8 31 159-190 5-38 (326)
488 3pgx_A Carveol dehydrogenase; 22.1 2.9E+02 0.0098 22.9 7.7 73 158-238 15-113 (280)
489 3k31_A Enoyl-(acyl-carrier-pro 21.9 1.7E+02 0.0059 24.8 6.3 72 158-238 30-116 (296)
490 3rd5_A Mypaa.01249.C; ssgcid, 21.9 1.5E+02 0.0051 24.9 5.9 70 158-238 16-94 (291)
491 3rwb_A TPLDH, pyridoxal 4-dehy 21.9 1.8E+02 0.0063 23.8 6.3 70 158-238 6-88 (247)
492 3l6e_A Oxidoreductase, short-c 21.9 1.6E+02 0.0055 24.0 5.9 69 159-238 4-85 (235)
493 1hdc_A 3-alpha, 20 beta-hydrox 21.6 2.8E+02 0.0095 22.7 7.4 70 158-238 5-87 (254)
494 2zat_A Dehydrogenase/reductase 21.6 2.6E+02 0.0091 22.7 7.3 73 158-238 14-99 (260)
495 2nvu_B Maltose binding protein 21.5 80 0.0027 31.4 4.5 32 158-189 411-444 (805)
496 3cxt_A Dehydrogenase with diff 21.5 2.5E+02 0.0086 23.7 7.3 73 158-238 34-119 (291)
497 4g65_A TRK system potassium up 21.4 1.5E+02 0.005 27.6 6.1 67 158-237 235-307 (461)
498 3i1j_A Oxidoreductase, short c 21.3 2.5E+02 0.0084 22.6 6.9 57 158-221 14-73 (247)
499 1wma_A Carbonyl reductase [NAD 21.0 2.7E+02 0.0093 22.4 7.2 73 158-238 4-90 (276)
500 4ibo_A Gluconate dehydrogenase 20.9 1.3E+02 0.0046 25.2 5.3 73 158-238 26-111 (271)
No 1
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.92 E-value=6.6e-26 Score=197.18 Aligned_cols=179 Identities=40% Similarity=0.756 Sum_probs=147.1
Q ss_pred CCceeecccCCCCCccCCHHHHHHHHhccccchhhhhhHhHhhHHhhhhccchhhccccCCCCCCcccchhhHHHHHHHH
Q 024811 66 SSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQQEKKTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQML 145 (262)
Q Consensus 66 ~~~~~~~g~d~~g~ef~s~~e~W~~~~~~~~~~~~~~~~wy~~~~~yW~~~~~~~dgvlgGy~~is~~di~~s~~fL~~l 145 (262)
+..+.+.|.|++|++|.++.++|++.+..... .....||....+||+.....+++++++|..++..+......++..+
T Consensus 12 ~~~~~~~g~d~~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 89 (254)
T 1xtp_A 12 SRNLPISGRDTNGKTYRSTDEMWKAELTGDLY--DPEKGWYGKALEYWRTVPATVSGVLGGMDHVHDVDIEGSRNFIASL 89 (254)
T ss_dssp -CCCCCCEEETTSCEESCHHHHHHHHSCSCTT--CTTTCHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHTS
T ss_pred cccccccccCCCCcccccHHHHHHHHHhcccc--ccchhhhhhhhhHHhcCCccccceecCcCccCHHHHHHHHHHHHhh
Confidence 45677999999999999999999998876322 2233599999999999999999999988777666655444444433
Q ss_pred hhccCCCccCCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC
Q 024811 146 LSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (262)
Q Consensus 146 l~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~ 225 (262)
. ..++.+|||+|||+|.++..|+.....+|+++|+|+.|++.|++++.. ..+++|+++|+.+++
T Consensus 90 ~--------~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~ 153 (254)
T 1xtp_A 90 P--------GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG--------MPVGKFILASMETAT 153 (254)
T ss_dssp T--------TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT--------SSEEEEEESCGGGCC
T ss_pred c--------ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc--------CCceEEEEccHHHCC
Confidence 1 235789999999999999999955566799999999999999998743 147899999998887
Q ss_pred CCCCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 226 ~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++||+|+++++++|+++++...+|+++.++|+||
T Consensus 154 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 190 (254)
T 1xtp_A 154 LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN 190 (254)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCC
Confidence 6567999999999999999887889999999999996
No 2
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.85 E-value=5.4e-22 Score=172.41 Aligned_cols=153 Identities=44% Similarity=0.865 Sum_probs=128.0
Q ss_pred hhhHhHhhHHhhhhccchhhccccCCCCCCcccchhhHHHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhcC
Q 024811 101 KKTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF 180 (262)
Q Consensus 101 ~~~~wy~~~~~yW~~~~~~~dgvlgGy~~is~~di~~s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~ 180 (262)
....||....+||+.....+++++++|..++..++..+..++..++.... ...++.+|||+|||+|.++..|+...+
T Consensus 26 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~~ 102 (241)
T 2ex4_A 26 DEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGP---NKTGTSCALDCGAGIGRITKRLLLPLF 102 (241)
T ss_dssp CHHHHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHGGGC-------CCCCSEEEEETCTTTHHHHHTTTTTC
T ss_pred ccchhHHHHHHHHhcCCccccccccCCCCcchhhHHhHHHHHHHHHHhcc---cCCCCCEEEEECCCCCHHHHHHHHhcC
Confidence 45689999999999999999999999988888887788888888765321 122477999999999999999995545
Q ss_pred CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhhhHHhhcCchhHHHHHHHHHhhcc
Q 024811 181 NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHS 260 (262)
Q Consensus 181 ~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~Lk 260 (262)
.+|+++|+|+.|++.|++++... ...+++|+++|+.++.+..++||+|+++++++|++++++..+|+++.++|+
T Consensus 103 ~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 176 (241)
T 2ex4_A 103 REVDMVDITEDFLVQAKTYLGEE------GKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLR 176 (241)
T ss_dssp SEEEEEESCHHHHHHHHHHTGGG------GGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE
T ss_pred CEEEEEeCCHHHHHHHHHHhhhc------CCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcC
Confidence 68999999999999999987542 123689999999888766578999999999999999888899999999999
Q ss_pred CC
Q 024811 261 QT 262 (262)
Q Consensus 261 PG 262 (262)
||
T Consensus 177 pg 178 (241)
T 2ex4_A 177 PN 178 (241)
T ss_dssp EE
T ss_pred CC
Confidence 86
No 3
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.74 E-value=9.2e-19 Score=164.48 Aligned_cols=215 Identities=17% Similarity=0.126 Sum_probs=143.5
Q ss_pred CCeeEEEeccchh--HHHHHHHHhhcCCCCCCCCCceeecccCCCCCccCCHHHHHHHHhccc-cc-hhhhh-hHhHh--
Q 024811 35 KPTLHLLHVGRRK--EKLRSAEAGAAADPKHKESSAMEVSGLDSDGKEFKNAEEMWREQIGED-GE-QQEKK-TQWYR-- 107 (262)
Q Consensus 35 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~g~ef~s~~e~W~~~~~~~-~~-~~~~~-~~wy~-- 107 (262)
...++|+.+||+| ++++.++++|++.- ++++.|++.|.+++|.+ ++..+-+...+.. .. +.++. ..|+.
T Consensus 101 ~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l--~~g~~i~~~g~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (381)
T 3dmg_A 101 AYDLVVLALPAGRGTAYVQASLVAAARAL--RMGGRLYLAGDKNKGFE--RYFKEARALLGYGVVVRREGPYRVALLEKE 176 (381)
T ss_dssp CEEEEEEECCGGGCHHHHHHHHHHHHHHE--EEEEEEEEEEEGGGTHH--HHHHHHHHHHSCEEEEEEETTEEEEEEECC
T ss_pred CCCEEEEECCcchhHHHHHHHHHHHHHhC--CCCCEEEEEEccHHHHH--HHHHHHHhhhccccccccccCcEEEEEEcc
Confidence 4568999999887 67899999988832 13788999999999988 8888887665420 00 11111 12221
Q ss_pred ----hHHhhhhccchhhcc----ccCCCCCCcccchhhHHHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhc
Q 024811 108 ----EGISYWEGVEASVDG----VLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY 179 (262)
Q Consensus 108 ----~~~~yW~~~~~~~dg----vlgGy~~is~~di~~s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~ 179 (262)
.....|......+.+ +...-+.++...++....++...+.+.+. ....++.+|||+|||+|.++..++ +.
T Consensus 177 ~~~p~~~~~w~~~~~~~~g~~~~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~-~~~~~~~~VLDlGcG~G~~~~~la-~~ 254 (381)
T 3dmg_A 177 KEAPPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLG-PEGVRGRQVLDLGAGYGALTLPLA-RM 254 (381)
T ss_dssp SCCCCCCCCCEEEEEEETTEEEEEEECTTCTTTTSCCHHHHHHHHHHHHHHC-TTTTTTCEEEEETCTTSTTHHHHH-HT
T ss_pred CCCCCCccccceeeEEecCceEEEEeCCCceeCCCCCHHHHHHHHHHHHhhc-ccCCCCCEEEEEeeeCCHHHHHHH-Hc
Confidence 123556543322111 00000112222222333434333322110 001246799999999999999999 55
Q ss_pred CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhhhHHhh---cCchhHHHHHHHHH
Q 024811 180 FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH---LTDDDFVSFFKRAK 256 (262)
Q Consensus 180 ~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~~vl~h---ltD~el~~~l~~~~ 256 (262)
+.+|++||+|+.|++.|++++... ...++|+++|+.++.++.++||+|+|+.++|| ....+...+|+++.
T Consensus 255 g~~V~gvDis~~al~~A~~n~~~~-------~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~ 327 (381)
T 3dmg_A 255 GAEVVGVEDDLASVLSLQKGLEAN-------ALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAA 327 (381)
T ss_dssp TCEEEEEESBHHHHHHHHHHHHHT-------TCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHc-------CCCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHH
Confidence 779999999999999999998642 22479999999998665579999999999988 44555668999999
Q ss_pred hhccCC
Q 024811 257 VNHSQT 262 (262)
Q Consensus 257 ~~LkPG 262 (262)
+.|+||
T Consensus 328 ~~LkpG 333 (381)
T 3dmg_A 328 ARLRPG 333 (381)
T ss_dssp HHEEEE
T ss_pred HhcCcC
Confidence 999986
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.74 E-value=3.5e-18 Score=152.48 Aligned_cols=100 Identities=7% Similarity=0.125 Sum_probs=86.4
Q ss_pred CCCceeeEeeccccHHHHHHHHhc---CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~---~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yD 232 (262)
+++.+|||+|||+|.++..|++.. +.+|++||+|+.||+.|++++.... ...+++|+++|+.+++. +.||
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~-----~~~~v~~~~~D~~~~~~--~~~d 141 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK-----APTPVDVIEGDIRDIAI--ENAS 141 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC-----CSSCEEEEESCTTTCCC--CSEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc-----cCceEEEeecccccccc--cccc
Confidence 367899999999999999999442 2379999999999999999986431 23479999999999866 4699
Q ss_pred hhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|++++++||+++++...+|++++++|+||
T Consensus 142 ~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG 171 (261)
T 4gek_A 142 MVVLNFTLQFLEPSERQALLDKIYQGLNPG 171 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred cceeeeeeeecCchhHhHHHHHHHHHcCCC
Confidence 999999999999988888999999999997
No 5
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.73 E-value=1.6e-18 Score=148.10 Aligned_cols=106 Identities=11% Similarity=0.002 Sum_probs=86.3
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhccccccc---CC---CCCcceEEEEcCCCCCCCCC-
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM---AP---DMHKATNFFCVPLQDFTPET- 228 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~---~~---~~~~~v~f~~~d~~~~~~~~- 228 (262)
.++.+|||+|||+|+.+..|+ +.+.+|++||+|+.|++.|+++....... .. ....+++|+++|+.++++.+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la-~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLS-GQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHH-HHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHH-HCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 357899999999999999999 45679999999999999999875421000 00 01247899999999987643
Q ss_pred CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++||+|++..+++|+++++...+++++.++|+||
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg 133 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQA 133 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999887778999999999997
No 6
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.72 E-value=1.6e-17 Score=141.36 Aligned_cols=94 Identities=23% Similarity=0.215 Sum_probs=85.1
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++. .+++++++|+.+++.. ++||+|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~----------~~~~~~~~d~~~~~~~-~~fD~v~~ 112 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLL-LAGRTVYGIEPSREMRMIAKEKLP----------KEFSITEGDFLSFEVP-TSIDTIVS 112 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHH-HTTCEEEEECSCHHHHHHHHHHSC----------TTCCEESCCSSSCCCC-SCCSEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHH-hCCCeEEEEeCCHHHHHHHHHhCC----------CceEEEeCChhhcCCC-CCeEEEEE
Confidence 46799999999999999999 557799999999999999999864 2688999999998766 79999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|+++++...+|+++.++|+||
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~Lkpg 138 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKG 138 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTT
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCC
Confidence 99999999998666999999999997
No 7
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=1.8e-17 Score=139.53 Aligned_cols=104 Identities=18% Similarity=0.317 Sum_probs=89.2
Q ss_pred HHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEE
Q 024811 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (262)
Q Consensus 139 ~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~ 218 (262)
..++..++.. .+.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|+++. .+++|++
T Consensus 31 ~~~l~~~~~~--------~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~ 90 (203)
T 3h2b_A 31 RVLIEPWATG--------VDGVILDVGSGTGRWTGHLA-SLGHQIEGLEPATRLVELARQTH-----------PSVTFHH 90 (203)
T ss_dssp HHHHHHHHHH--------CCSCEEEETCTTCHHHHHHH-HTTCCEEEECCCHHHHHHHHHHC-----------TTSEEEC
T ss_pred HHHHHHHhcc--------CCCeEEEecCCCCHHHHHHH-hcCCeEEEEeCCHHHHHHHHHhC-----------CCCeEEe
Confidence 4556666542 26789999999999999999 55779999999999999999974 2689999
Q ss_pred cCCCCCCCCCCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 219 VPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 219 ~d~~~~~~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|+.+++..+++||+|+++.+++|+++++...+|+++.++|+||
T Consensus 91 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg 134 (203)
T 3h2b_A 91 GTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDG 134 (203)
T ss_dssp CCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEE
T ss_pred CcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCC
Confidence 99998876567999999999999999777779999999999986
No 8
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.70 E-value=3.2e-17 Score=145.49 Aligned_cols=105 Identities=12% Similarity=0.072 Sum_probs=85.9
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhccccc------ccCC-----CCCcceEEEEcCCCCCC
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPEN------HMAP-----DMHKATNFFCVPLQDFT 225 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~------~~~~-----~~~~~v~f~~~d~~~~~ 225 (262)
++.+|||+|||+|+.+..|+ +.+.+|++||+|+.|++.|+++..... .... ....+++|+++|+.+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La-~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFA-DRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHH-HTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCeEEEeCCCCcHHHHHHH-HCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 46799999999999999999 557799999999999999987653100 0000 01247899999999987
Q ss_pred CCC-CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 226 PET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 226 ~~~-~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.. ++||+|++..+++|+++++...+++++.++|+||
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG 184 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE 184 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC
Confidence 643 7999999999999999888778999999999997
No 9
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.70 E-value=2.3e-17 Score=144.40 Aligned_cols=97 Identities=14% Similarity=0.235 Sum_probs=85.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++... ...+++|+.+|++++++++++||+|+|
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~l~~a~~~~~~~------~~~~v~~~~~d~~~l~~~~~~fD~V~~ 109 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFA-PFVKKVVAFDLTEDILKVARAFIEGN------GHQQVEYVQGDAEQMPFTDERFHIVTC 109 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHG-GGSSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCC-CCCSCTTCEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHH-HhCCEEEEEeCCHHHHHHHHHHHHhc------CCCceEEEEecHHhCCCCCCCEEEEEE
Confidence 57899999999999999999 66679999999999999999987542 224689999999998766679999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|++|++ .+|+++.++|+||
T Consensus 110 ~~~l~~~~d~~--~~l~~~~r~Lkpg 133 (260)
T 1vl5_A 110 RIAAHHFPNPA--SFVSEAYRVLKKG 133 (260)
T ss_dssp ESCGGGCSCHH--HHHHHHHHHEEEE
T ss_pred hhhhHhcCCHH--HHHHHHHHHcCCC
Confidence 99999999987 9999999999996
No 10
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.70 E-value=1.3e-17 Score=148.75 Aligned_cols=90 Identities=20% Similarity=0.304 Sum_probs=80.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
.+.+|||||||+|.++..|+ +.+.+|++||+|+.|++.|+++ .+++|+++|+++++.++++||+|+|
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~-~~~~~v~gvD~s~~ml~~a~~~------------~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLA-EFFERVHAVDPGEAQIRQALRH------------PRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHH-TTCSEEEEEESCHHHHHTCCCC------------TTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCEEEEcCCCCHHHHHHH-HhCCEEEEEeCcHHhhhhhhhc------------CCceeehhhhhhhcccCCcccEEEE
Confidence 45789999999999999999 7789999999999999877642 3789999999999877789999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
..++||+. .+ ++++++.++||||
T Consensus 106 ~~~~h~~~-~~--~~~~e~~rvLkpg 128 (257)
T 4hg2_A 106 AQAMHWFD-LD--RFWAELRRVARPG 128 (257)
T ss_dssp CSCCTTCC-HH--HHHHHHHHHEEEE
T ss_pred eeehhHhh-HH--HHHHHHHHHcCCC
Confidence 99998874 55 7999999999997
No 11
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.69 E-value=1.6e-17 Score=143.04 Aligned_cols=94 Identities=15% Similarity=0.087 Sum_probs=84.4
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|+++.. ..+++++++|+.+++.++++||+|++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLS-RTGYKAVGVDISEVMIQKGKERGE---------GPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHTTTC---------BTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHH-HcCCeEEEEECCHHHHHHHHhhcc---------cCCceEEEcchhcCCCCCCCccEEEE
Confidence 46799999999999999999 557799999999999999999852 24789999999998766689999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
..+++|++++. .+++++.++|+||
T Consensus 123 ~~~l~~~~~~~--~~l~~~~~~L~pg 146 (242)
T 3l8d_A 123 INSLEWTEEPL--RALNEIKRVLKSD 146 (242)
T ss_dssp ESCTTSSSCHH--HHHHHHHHHEEEE
T ss_pred cChHhhccCHH--HHHHHHHHHhCCC
Confidence 99999998887 9999999999986
No 12
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.69 E-value=6e-17 Score=136.89 Aligned_cols=94 Identities=19% Similarity=0.304 Sum_probs=83.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++. ...+++|+++|+.++ ...++||+|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~-~~~~~v~~~D~s~~~~~~a~~~----------~~~~~~~~~~d~~~~-~~~~~~D~v~~ 113 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLS-GLADRVTALDGSAEMIAEAGRH----------GLDNVEFRQQDLFDW-TPDRQWDAVFF 113 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHH-HHSSEEEEEESCHHHHHHHGGG----------CCTTEEEEECCTTSC-CCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHH-hcCCeEEEEeCCHHHHHHHHhc----------CCCCeEEEecccccC-CCCCceeEEEE
Confidence 46799999999999999999 4477999999999999999982 124789999999998 44579999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|++++++..+|+++.++|+||
T Consensus 114 ~~~l~~~~~~~~~~~l~~~~~~L~pg 139 (218)
T 3ou2_A 114 AHWLAHVPDDRFEAFWESVRSAVAPG 139 (218)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCC
Confidence 99999999997789999999999986
No 13
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.69 E-value=9.3e-18 Score=143.97 Aligned_cols=92 Identities=22% Similarity=0.283 Sum_probs=82.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||||||+|.++..|+ +.+.+|+++|+|+.|++.|+++... +++|+++|++++. .+++||+|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~~~~----------~v~~~~~d~~~~~-~~~~fD~v~~ 109 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQ-EHFNDITCVEASEEAISHAQGRLKD----------GITYIHSRFEDAQ-LPRRYDNIVL 109 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHT-TTCSCEEEEESCHHHHHHHHHHSCS----------CEEEEESCGGGCC-CSSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHH-HhCCcEEEEeCCHHHHHHHHHhhhC----------CeEEEEccHHHcC-cCCcccEEEE
Confidence 46789999999999999999 6677999999999999999998631 6899999998884 4579999999
Q ss_pred hhHHhhcCchhHHHHHHHHH-hhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAK-VNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~-~~LkPG 262 (262)
..+++|++|++ .+|+++. ++|+||
T Consensus 110 ~~~l~~~~~~~--~~l~~~~~~~Lkpg 134 (250)
T 2p7i_A 110 THVLEHIDDPV--ALLKRINDDWLAEG 134 (250)
T ss_dssp ESCGGGCSSHH--HHHHHHHHTTEEEE
T ss_pred hhHHHhhcCHH--HHHHHHHHHhcCCC
Confidence 99999999987 9999999 999996
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.69 E-value=8.9e-17 Score=141.20 Aligned_cols=101 Identities=16% Similarity=0.193 Sum_probs=87.6
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
..++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++.... ...+++++.+|+.+++.++++||+|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~fD~v 133 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAG-----LANRVTFSYADAMDLPFEDASFDAV 133 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcC-----CCcceEEEECccccCCCCCCCccEE
Confidence 34678999999999999999996567799999999999999999875421 1236899999999887666799999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++.+++|+++.+ .+|+++.++|+||
T Consensus 134 ~~~~~l~~~~~~~--~~l~~~~~~L~pg 159 (273)
T 3bus_A 134 WALESLHHMPDRG--RALREMARVLRPG 159 (273)
T ss_dssp EEESCTTTSSCHH--HHHHHHHTTEEEE
T ss_pred EEechhhhCCCHH--HHHHHHHHHcCCC
Confidence 9999999999887 9999999999996
No 15
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.68 E-value=5.1e-17 Score=141.35 Aligned_cols=100 Identities=18% Similarity=0.185 Sum_probs=87.9
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
..++.+|||+|||+|.++..|+.....+|+++|+|+.|++.|++++... .+++|+++|+.+++.++++||+|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~~~~~~~~fD~v 124 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN--------NKIIFEANDILTKEFPENNFDLI 124 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC--------TTEEEEECCTTTCCCCTTCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC--------CCeEEEECccccCCCCCCcEEEE
Confidence 4467899999999999999999555779999999999999999987531 47899999999987656899999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++.+++|+++++...+|+++.++|+||
T Consensus 125 ~~~~~l~~~~~~~~~~~l~~~~~~L~pg 152 (266)
T 3ujc_A 125 YSRDAILALSLENKNKLFQKCYKWLKPT 152 (266)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred eHHHHHHhcChHHHHHHHHHHHHHcCCC
Confidence 9999999997766679999999999996
No 16
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.68 E-value=2.2e-17 Score=152.06 Aligned_cols=203 Identities=15% Similarity=0.158 Sum_probs=135.1
Q ss_pred CCeeEEEeccchhHHHHHHHHhhcCCCCCCCCCceeecccCCCCCccCCHHHHHHHHhccccch----hhhhhHhHh---
Q 024811 35 KPTLHLLHVGRRKEKLRSAEAGAAADPKHKESSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQ----QEKKTQWYR--- 107 (262)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~g~ef~s~~e~W~~~~~~~~~~----~~~~~~wy~--- 107 (262)
...++|+.+||.|++++.+++++++.. .+++.+.+.|.+..|.. +..++..+ +.. ..+ -++...|..
T Consensus 76 ~~~~~~~~~pk~~~~~~~~l~~~~~~~--~~~~~~~~~g~~~~~~~--~~~~~~~~-~~~-~~~~~~a~~~~~~~~~~~~ 149 (343)
T 2pjd_A 76 DCDTLIYYWPKNKPEAQFQLMNLLSLL--PVGTDIFVVGENRSGVR--SAEQMLAD-YAP-LNKVDSARRCGLYFGRLEK 149 (343)
T ss_dssp TCSEEEEECCSSHHHHHHHHHHHHTTS--CTTCEEEEEEEGGGTGG--GHHHHHTT-TSC-CEEECCCTTEEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHHhC--CCCCEEEEEEecCCCHH--hHHHHHHH-hcC-cchhhhhhcceeEEeeccc
Confidence 467999999999999999999998853 23678889999999888 88777754 332 110 011111111
Q ss_pred ----hHHhhhhccch---hhccccCCCCCCcccchhhHHHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhcC
Q 024811 108 ----EGISYWEGVEA---SVDGVLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF 180 (262)
Q Consensus 108 ----~~~~yW~~~~~---~~dgvlgGy~~is~~di~~s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~ 180 (262)
....||..... .+. ...|. ++...++....++...+. ..++.+|||+|||+|.++..++....
T Consensus 150 ~~~~~~~~~~~~y~~~~~~~~-~~~gv--f~~~~~d~~~~~ll~~l~-------~~~~~~VLDlGcG~G~~~~~la~~~~ 219 (343)
T 2pjd_A 150 QPVFDAEKFWGEYSVDGLTVK-TLPGV--FSRDGLDVGSQLLLSTLT-------PHTKGKVLDVGCGAGVLSVAFARHSP 219 (343)
T ss_dssp CCCCCGGGGCEEEEETTEEEE-ECTTC--TTSSSCCHHHHHHHHHSC-------TTCCSBCCBTTCTTSHHHHHHHHHCT
T ss_pred CCCCCchhhcceeeccceEEE-ecCCc--cCCCCCcHHHHHHHHhcC-------cCCCCeEEEecCccCHHHHHHHHHCC
Confidence 11233332211 111 11111 222223333444444442 11356899999999999999994432
Q ss_pred -CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhhhHHhhc---CchhHHHHHHHHH
Q 024811 181 -NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGHL---TDDDFVSFFKRAK 256 (262)
Q Consensus 181 -~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~~vl~hl---tD~el~~~l~~~~ 256 (262)
.+|+++|+|+.|++.|++++... ...++++++|+.++. .++||+|+++.++|+. +..+...+|+++.
T Consensus 220 ~~~v~~vD~s~~~l~~a~~~~~~~-------~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~ 290 (343)
T 2pjd_A 220 KIRLTLCDVSAPAVEASRATLAAN-------GVEGEVFASNVFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAV 290 (343)
T ss_dssp TCBCEEEESBHHHHHHHHHHHHHT-------TCCCEEEECSTTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHG
T ss_pred CCEEEEEECCHHHHHHHHHHHHHh-------CCCCEEEEccccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHH
Confidence 38999999999999999998542 123678899998764 3689999999998862 3344558999999
Q ss_pred hhccCC
Q 024811 257 VNHSQT 262 (262)
Q Consensus 257 ~~LkPG 262 (262)
++|+||
T Consensus 291 ~~Lkpg 296 (343)
T 2pjd_A 291 RHLNSG 296 (343)
T ss_dssp GGEEEE
T ss_pred HhCCCC
Confidence 999996
No 17
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.68 E-value=5.8e-17 Score=137.41 Aligned_cols=92 Identities=17% Similarity=0.281 Sum_probs=82.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++ ++.++++|+.+++ ..++||+|++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~------------~~~~~~~d~~~~~-~~~~fD~v~~ 108 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAML-AAGFDVDATDGSPELAAEASRRL------------GRPVRTMLFHQLD-AIDAYDAVWA 108 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHH------------TSCCEECCGGGCC-CCSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHH-HcCCeEEEECCCHHHHHHHHHhc------------CCceEEeeeccCC-CCCcEEEEEe
Confidence 57799999999999999999 55779999999999999999986 3567888888887 4579999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|+++++...+|+++.++|+||
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~Lkpg 134 (211)
T 3e23_A 109 HACLLHVPRDELADVLKLIWRALKPG 134 (211)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCC
Confidence 99999999777779999999999986
No 18
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.68 E-value=1.7e-16 Score=141.45 Aligned_cols=100 Identities=18% Similarity=0.214 Sum_probs=86.6
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.++..|+.....+|+++|+|+.|++.|++++.... ...+++|+++|+.++++++++||+|+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~fD~v~ 155 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAG-----LADNITVKYGSFLEIPCEDNSYDFIW 155 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHT-----CTTTEEEEECCTTSCSSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcC-----CCcceEEEEcCcccCCCCCCCEeEEE
Confidence 4578999999999999999995546689999999999999999875421 12468999999999876667999999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+..+++|+++.. .+|+++.++|+||
T Consensus 156 ~~~~l~~~~~~~--~~l~~~~~~Lkpg 180 (297)
T 2o57_A 156 SQDAFLHSPDKL--KVFQECARVLKPR 180 (297)
T ss_dssp EESCGGGCSCHH--HHHHHHHHHEEEE
T ss_pred ecchhhhcCCHH--HHHHHHHHHcCCC
Confidence 999999999966 9999999999996
No 19
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.67 E-value=3.2e-16 Score=139.03 Aligned_cols=100 Identities=16% Similarity=0.168 Sum_probs=86.0
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
..++.+|||+|||+|.++..++...+.+|+++|+|+.|++.|++++.... ...+++++.+|+.+++ ++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~-----~~~~~~~~~~d~~~~~---~~fD~v 133 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSE-----NLRSKRVLLAGWEQFD---EPVDRI 133 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCC-----CCSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-----CCCCeEEEECChhhCC---CCeeEE
Confidence 44678999999999999999996666799999999999999999875421 2247899999998774 689999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++..+++|+++++...+|+++.++|+||
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 161 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPAD 161 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTT
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCC
Confidence 9999999997766669999999999997
No 20
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.67 E-value=2.1e-16 Score=134.76 Aligned_cols=104 Identities=19% Similarity=0.178 Sum_probs=86.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
++.+|||+|||+|.++..|+ +.+ .+|+++|+|+.|++.|++++....-. .....+++|+++|+...+...++||+|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~-~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLL-KDKSFEQITGVDVSYSVLERAKDRLKIDRLP-EMQRKRISLFQSSLVYRDKRFSGYDAA 106 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHH-TSTTCCEEEEEESCHHHHHHHHHHHTGGGSC-HHHHTTEEEEECCSSSCCGGGTTCSEE
T ss_pred CCCEEEEecCCCCHHHHHHH-hcCCCCEEEEEECCHHHHHHHHHHHHhhccc-cccCcceEEEeCcccccccccCCCCEE
Confidence 46799999999999999999 555 58999999999999999987532100 000126899999997776555799999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|+.+++|++++++..+++++.++|+||
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 134 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRPQ 134 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCS
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCCC
Confidence 9999999999998889999999999997
No 21
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.67 E-value=1.8e-16 Score=148.50 Aligned_cols=212 Identities=13% Similarity=0.103 Sum_probs=137.5
Q ss_pred CCeeEEEeccchhHHHHHHHHhhcCCCCCCCCCceeecccCCCCCccCCHHHHHHHHhccc---cchhhhhhHhHhhH-H
Q 024811 35 KPTLHLLHVGRRKEKLRSAEAGAAADPKHKESSAMEVSGLDSDGKEFKNAEEMWREQIGED---GEQQEKKTQWYREG-I 110 (262)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~g~ef~s~~e~W~~~~~~~---~~~~~~~~~wy~~~-~ 110 (262)
...++|+.+||++++++..+++.++.- .++..+++.|.+..|.. +..++..+..+.. ..+.+....|.... .
T Consensus 100 ~~~~v~~~lpk~~~~l~~~L~~l~~~l--~~~~~i~~~g~~~~~~~--~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~ 175 (375)
T 4dcm_A 100 QPGVVLIKVPKTLALLEQQLRALRKVV--TSDTRIIAGAKARDIHT--STLELFEKVLGPTTTTLAWKKARLINCTFNEP 175 (375)
T ss_dssp SCSEEEEECCSCHHHHHHHHHHHHTTC--CTTSEEEEEEEGGGCCH--HHHHHHHHHTCCEEECCCBTTEEEEEECCCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHhhC--CCCCEEEEEecccchHH--HHHHHHHhhcCccchhhhhceeEEEEEeCCCC
Confidence 567899999999999999999998853 24778889999988886 8888887765541 11111111121100 0
Q ss_pred --------hhhhccchhhccccCCCCCCcccchhhHHHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhc-CC
Q 024811 111 --------SYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY-FN 181 (262)
Q Consensus 111 --------~yW~~~~~~~dgvlgGy~~is~~di~~s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~-~~ 181 (262)
..|.-....+ .+.-.-+.++...++....++...+. ..++.+|||+|||+|.++..++... ..
T Consensus 176 ~~~~~~~~~~~~~~~~~~-~~~~~pg~Fs~~~~d~~~~~ll~~l~-------~~~~~~VLDlGcG~G~~s~~la~~~p~~ 247 (375)
T 4dcm_A 176 QLADAPQTVSWKLEGTDW-TIHNHANVFSRTGLDIGARFFMQHLP-------ENLEGEIVDLGCGNGVIGLTLLDKNPQA 247 (375)
T ss_dssp CCCCCCSCEEEEETTTTE-EEEECTTCTTCSSCCHHHHHHHHTCC-------CSCCSEEEEETCTTCHHHHHHHHHCTTC
T ss_pred CCCCCCCceEEEecCCce-EEEeCCCcccCCcccHHHHHHHHhCc-------ccCCCeEEEEeCcchHHHHHHHHHCCCC
Confidence 0111000000 00000122333344444455544443 1235799999999999999999543 56
Q ss_pred cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhhhHHhh---cCchhHHHHHHHHHhh
Q 024811 182 EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH---LTDDDFVSFFKRAKVN 258 (262)
Q Consensus 182 ~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~~vl~h---ltD~el~~~l~~~~~~ 258 (262)
+|++||+|+.|++.|++++....- ....+++|+.+|+.+..+ .++||+|+|+.++|+ +++....++|+++.+.
T Consensus 248 ~V~gvD~s~~al~~Ar~n~~~ngl---~~~~~v~~~~~D~~~~~~-~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~ 323 (375)
T 4dcm_A 248 KVVFVDESPMAVASSRLNVETNMP---EALDRCEFMINNALSGVE-PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 323 (375)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCG---GGGGGEEEEECSTTTTCC-TTCEEEEEECCCC-------CCHHHHHHHHHHHH
T ss_pred EEEEEECcHHHHHHHHHHHHHcCC---CcCceEEEEechhhccCC-CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHh
Confidence 899999999999999998764210 011257889999988544 468999999998886 4444445799999999
Q ss_pred ccCC
Q 024811 259 HSQT 262 (262)
Q Consensus 259 LkPG 262 (262)
|+||
T Consensus 324 Lkpg 327 (375)
T 4dcm_A 324 LKIN 327 (375)
T ss_dssp EEEE
T ss_pred CCCC
Confidence 9986
No 22
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.67 E-value=2.4e-16 Score=134.40 Aligned_cols=104 Identities=18% Similarity=0.112 Sum_probs=85.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
++.+|||+|||+|.++..|+ +.+ .+|+++|+|+.|++.|++++....-. .....+++|+++|+...+...++||+|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~-~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILL-KDSFFEQITGVDVSYRSLEIAQERLDRLRLP-RNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHH-HCTTCSEEEEEESCHHHHHHHHHHHTTCCCC-HHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred CCCEEEEeCCCCCHHHHHHH-hhCCCCEEEEEECCHHHHHHHHHHHHHhcCC-cccCcceEEEeCCcccccccCCCcCEE
Confidence 46799999999999999999 544 58999999999999999987532100 000126899999997766555789999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|+.+++|++++++..+++++.++|+||
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 134 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPK 134 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCS
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCC
Confidence 9999999999998789999999999997
No 23
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.66 E-value=1.2e-16 Score=135.72 Aligned_cols=96 Identities=13% Similarity=0.148 Sum_probs=85.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++.. ..+++|+++|+.++.+ .++||+|++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~~-~~~fD~v~~ 120 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLA-PHCKRLTVIDVMPRAIGRACQRTKR--------WSHISWAATDILQFST-AELFDLIVV 120 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHG-GGEEEEEEEESCHHHHHHHHHHTTT--------CSSEEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCcEEEEcCCCCHHHHHHH-HcCCEEEEEECCHHHHHHHHHhccc--------CCCeEEEEcchhhCCC-CCCccEEEE
Confidence 46799999999999999999 5567999999999999999998753 2378999999999875 479999999
Q ss_pred hhHHhhcCch-hHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDD-DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~-el~~~l~~~~~~LkPG 262 (262)
+.+++|++++ ++..+|+++.++|+||
T Consensus 121 ~~~l~~~~~~~~~~~~l~~~~~~L~pg 147 (216)
T 3ofk_A 121 AEVLYYLEDMTQMRTAIDNMVKMLAPG 147 (216)
T ss_dssp ESCGGGSSSHHHHHHHHHHHHHTEEEE
T ss_pred ccHHHhCCCHHHHHHHHHHHHHHcCCC
Confidence 9999999985 5568999999999996
No 24
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.65 E-value=1.5e-16 Score=138.31 Aligned_cols=100 Identities=12% Similarity=-0.025 Sum_probs=86.6
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
..++.+|||+|||+|.++..|+.....+|+++|+|+.|++.|++++.... ...+++|+++|+.++++ +++||+|
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~-~~~fD~V 107 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELG-----VSERVHFIHNDAAGYVA-NEKCDVA 107 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEESCCTTCCC-SSCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcC-----CCcceEEEECChHhCCc-CCCCCEE
Confidence 34578999999999999999995556689999999999999999875421 12479999999999876 5799999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|..+++|+++.. .+|++++++|+||
T Consensus 108 ~~~~~~~~~~~~~--~~l~~~~r~Lkpg 133 (256)
T 1nkv_A 108 ACVGATWIAGGFA--GAEELLAQSLKPG 133 (256)
T ss_dssp EEESCGGGTSSSH--HHHHHHTTSEEEE
T ss_pred EECCChHhcCCHH--HHHHHHHHHcCCC
Confidence 9999999999877 9999999999996
No 25
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.65 E-value=2.1e-16 Score=135.75 Aligned_cols=97 Identities=21% Similarity=0.365 Sum_probs=86.4
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
++.+|||+|||+|.++..|+... ..+|+++|+|+.|++.|++++... .+++++++|+.++++. ++||+|+
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~~~~~-~~fD~v~ 114 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN--------LKVKYIEADYSKYDFE-EKYDMVV 114 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC--------TTEEEEESCTTTCCCC-SCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC--------CCEEEEeCchhccCCC-CCceEEE
Confidence 56899999999999999999443 558999999999999999987532 2789999999998776 7999999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.+++|+++++...+|+++.++|+||
T Consensus 115 ~~~~l~~~~~~~~~~~l~~~~~~Lkpg 141 (234)
T 3dtn_A 115 SALSIHHLEDEDKKELYKRSYSILKES 141 (234)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred EeCccccCCHHHHHHHHHHHHHhcCCC
Confidence 999999999998778999999999996
No 26
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.65 E-value=1.8e-16 Score=137.35 Aligned_cols=97 Identities=15% Similarity=0.094 Sum_probs=83.7
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC-----Cc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-----GR 230 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~-----~~ 230 (262)
.++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++.. .+++|+++|+.++.... ..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la-~~~~~v~gvD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~ 124 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLS-QFFPRVIGLDVSKSALEIAAKENTA---------ANISYRLLDGLVPEQAAQIHSEIG 124 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHH-HHSSCEEEEESCHHHHHHHHHHSCC---------TTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCCeEEEEcCCCCHHHHHHH-HhCCCEEEEECCHHHHHHHHHhCcc---------cCceEEECcccccccccccccccC
Confidence 356799999999999999999 5566999999999999999998732 37899999999864321 24
Q ss_pred cchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 231 yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
||+|+++.++||+++++...+|+++.++|+||
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 156 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGKQ 156 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTTT
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999777779999999999997
No 27
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.64 E-value=3e-16 Score=136.22 Aligned_cols=99 Identities=14% Similarity=0.181 Sum_probs=86.8
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
..++.+|||+|||+|.++..++ +.+.+|+++|+|+.|++.|++++... ...+++|+.+|+++++..+++||+|
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~fD~v 91 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFS-PYVQECIGVDATKEMVEVASSFAQEK------GVENVRFQQGTAESLPFPDDSFDII 91 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHG-GGSSEEEEEESCHHHHHHHHHHHHHH------TCCSEEEEECBTTBCCSCTTCEEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHH-HhCCEEEEEECCHHHHHHHHHHHHHc------CCCCeEEEecccccCCCCCCcEEEE
Confidence 3467899999999999999999 66779999999999999999987542 1246899999999887666799999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++.+++|++|.+ .+|+++.++|+||
T Consensus 92 ~~~~~l~~~~~~~--~~l~~~~~~Lkpg 117 (239)
T 1xxl_A 92 TCRYAAHHFSDVR--KAVREVARVLKQD 117 (239)
T ss_dssp EEESCGGGCSCHH--HHHHHHHHHEEEE
T ss_pred EECCchhhccCHH--HHHHHHHHHcCCC
Confidence 9999999999877 9999999999996
No 28
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.64 E-value=5.2e-16 Score=135.97 Aligned_cols=93 Identities=22% Similarity=0.312 Sum_probs=83.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++. +++|+++|+.+++. +++||+|+|
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLA-DSFGTVEGLELSADMLAIARRRNP-----------DAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHT-TTSSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCcEEEeCCcCCHHHHHHH-HcCCeEEEEECCHHHHHHHHhhCC-----------CCEEEECChHHCCc-cCCcCEEEE
Confidence 46799999999999999999 667899999999999999999852 67999999999876 479999999
Q ss_pred hh-HHhhcCc-hhHHHHHHHHHhhccCC
Q 024811 237 QW-CIGHLTD-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~-vl~hltD-~el~~~l~~~~~~LkPG 262 (262)
+. +++|+.+ +++..+|+++.++|+||
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pg 144 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPD 144 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEE
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCC
Confidence 98 9999976 45668999999999996
No 29
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.64 E-value=1.4e-15 Score=137.12 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=85.8
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
..++.+|||+|||+|.++..++...+.+|+++|+|+.|++.|++++.... ...+++++.+|+.+++ ++||+|
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~---~~fD~v 159 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASID-----TNRSRQVLLQGWEDFA---EPVDRI 159 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSC-----CSSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CCCceEEEECChHHCC---CCcCEE
Confidence 44678999999999999999995546799999999999999999875421 1246899999998773 689999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++..+++|+++++...+|+++.++|+||
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 187 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPAD 187 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTT
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCC
Confidence 9999999998777779999999999997
No 30
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.63 E-value=3e-16 Score=138.23 Aligned_cols=100 Identities=22% Similarity=0.252 Sum_probs=87.1
Q ss_pred CCCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
..++.+|||+|||+|.++..|+... ..+|+++|+|+.|++.|++++... ...+++|+..|+.++++++++||+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~~~~~~~~fD~ 108 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN------GIKNVKFLQANIFSLPFEDSSFDH 108 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCGGGCCSCTTCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEcccccCCCCCCCeeE
Confidence 3467899999999999999999543 458999999999999999987542 224789999999988766689999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+++.+++|++|++ .+++++.++|+||
T Consensus 109 v~~~~~l~~~~~~~--~~l~~~~~~L~pg 135 (276)
T 3mgg_A 109 IFVCFVLEHLQSPE--EALKSLKKVLKPG 135 (276)
T ss_dssp EEEESCGGGCSCHH--HHHHHHHHHEEEE
T ss_pred EEEechhhhcCCHH--HHHHHHHHHcCCC
Confidence 99999999999988 9999999999996
No 31
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.63 E-value=1.4e-15 Score=136.34 Aligned_cols=112 Identities=16% Similarity=0.170 Sum_probs=90.7
Q ss_pred HHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEE
Q 024811 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (262)
Q Consensus 139 ~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~ 218 (262)
...+..++.. + +..++.+|||||||+|.++..|+...+.+|+++|+|+.|++.|++++.... ...+++++.
T Consensus 58 ~~~~~~~~~~-~---~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~v~~~~ 128 (302)
T 3hem_A 58 YAKRKLALDK-L---NLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVD-----SPRRKEVRI 128 (302)
T ss_dssp HHHHHHHHHT-T---CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSC-----CSSCEEEEE
T ss_pred HHHHHHHHHH-c---CCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC-----CCCceEEEE
Confidence 3345555542 2 244678999999999999999996546889999999999999999976421 223689999
Q ss_pred cCCCCCCCCCCccchhhhhhHHhhcCch-------hHHHHHHHHHhhccCC
Q 024811 219 VPLQDFTPETGRYDVIWVQWCIGHLTDD-------DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 219 ~d~~~~~~~~~~yDlI~s~~vl~hltD~-------el~~~l~~~~~~LkPG 262 (262)
+|+.++ +++||+|+++.+++|++|+ ++..+|+++.++|+||
T Consensus 129 ~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg 176 (302)
T 3hem_A 129 QGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD 176 (302)
T ss_dssp CCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT
T ss_pred CCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC
Confidence 999887 3689999999999999764 4568999999999997
No 32
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=4.6e-16 Score=136.94 Aligned_cols=91 Identities=16% Similarity=0.106 Sum_probs=81.5
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|+++. +++|+++|+++++.++++||+|+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~~------------~~~~~~~d~~~~~~~~~~fD~v~ 99 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALA-NQGLFVYAVEPSIVMRQQAVVHP------------QVEWFTGYAENLALPDKSVDGVI 99 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHH-TTTCEEEEECSCHHHHHSSCCCT------------TEEEECCCTTSCCSCTTCBSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHH-hCCCEEEEEeCCHHHHHHHHhcc------------CCEEEECchhhCCCCCCCEeEEE
Confidence 357899999999999999999 56789999999999999887653 68999999999876668999999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+.+++|++|.+ .+|+++.++|+ |
T Consensus 100 ~~~~l~~~~~~~--~~l~~~~~~Lk-g 123 (261)
T 3ege_A 100 SILAIHHFSHLE--KSFQEMQRIIR-D 123 (261)
T ss_dssp EESCGGGCSSHH--HHHHHHHHHBC-S
T ss_pred EcchHhhccCHH--HHHHHHHHHhC-C
Confidence 999999998877 99999999999 6
No 33
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.63 E-value=1e-15 Score=130.21 Aligned_cols=98 Identities=18% Similarity=0.189 Sum_probs=83.8
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++ +.+.+|+++|+|+.|++.|++++... ..+++++++|+.+++...++||+|++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLE-DYGFEVVGVDISEDMIRKAREYAKSR-------ESNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHH-HcCCEEEEEECCHHHHHHHHHHHHhc-------CCCceEEECchhcCCCCCCcEEEEEE
Confidence 46799999999999999999 66779999999999999999987532 24789999999987655579999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.++++...++...+++++.++|+||
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~~g 135 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLKPS 135 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEEEE
T ss_pred cCchHhCCHHHHHHHHHHHHHHcCCC
Confidence 99966666666669999999999986
No 34
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.63 E-value=3e-16 Score=132.16 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=84.3
Q ss_pred ceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhhh
Q 024811 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQW 238 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~~ 238 (262)
.+|||+|||+|.++..|+.....+|+++|+|+.|++.|++++.... ...+++++++|+.+++.++++||+|+++.
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADAN-----LNDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhcc-----ccCceEEEEcCHHHCCCCcccccEEEECc
Confidence 4999999999999999995535589999999999999999976431 12478999999999876667999999999
Q ss_pred HHhhcCchhHHHHHHHHHhhccCC
Q 024811 239 CIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 239 vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++|+.+.+ .+|+++.++|+||
T Consensus 120 ~l~~~~~~~--~~l~~~~~~L~pg 141 (219)
T 3dlc_A 120 SVFFWEDVA--TAFREIYRILKSG 141 (219)
T ss_dssp CGGGCSCHH--HHHHHHHHHEEEE
T ss_pred hHhhccCHH--HHHHHHHHhCCCC
Confidence 999998877 9999999999996
No 35
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.63 E-value=5.6e-16 Score=129.07 Aligned_cols=98 Identities=17% Similarity=0.123 Sum_probs=85.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++... ...+++++++|+.+++. .++||+|++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~~~~-~~~~D~v~~ 103 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLA-ANGYDVDAWDKNAMSIANVERIKSIE------NLDNLHTRVVDLNNLTF-DRQYDFILS 103 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHH------TCTTEEEEECCGGGCCC-CCCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHH-HCCCeEEEEECCHHHHHHHHHHHHhC------CCCCcEEEEcchhhCCC-CCCceEEEE
Confidence 46799999999999999999 55779999999999999999987542 12368999999998866 579999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|+++++...+++++.++|+||
T Consensus 104 ~~~l~~~~~~~~~~~l~~~~~~L~~g 129 (199)
T 2xvm_A 104 TVVLMFLEAKTIPGLIANMQRCTKPG 129 (199)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHTEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999777779999999999986
No 36
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.63 E-value=4.2e-16 Score=135.54 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=85.6
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++.. ...+++|+.+|+++++..+++||+|+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~~d~~~~~~~~~~fD~v~ 109 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLI-ARGYRYIALDADAAMLEVFRQKIAG-------VDRKVQVVQADARAIPLPDESVHGVI 109 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHH-TTTCEEEEEESCHHHHHHHHHHTTT-------SCTTEEEEESCTTSCCSCTTCEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhhc-------cCCceEEEEcccccCCCCCCCeeEEE
Confidence 357899999999999999999 5578999999999999999998721 23578999999998876567899999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.++||++|.+ .+++++.++|+||
T Consensus 110 ~~~~l~~~~~~~--~~l~~~~~~L~pg 134 (263)
T 2yqz_A 110 VVHLWHLVPDWP--KVLAEAIRVLKPG 134 (263)
T ss_dssp EESCGGGCTTHH--HHHHHHHHHEEEE
T ss_pred ECCchhhcCCHH--HHHHHHHHHCCCC
Confidence 999999999877 9999999999996
No 37
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.63 E-value=1.4e-15 Score=127.89 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=83.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++.. ..+++++.+|+.+++..+++||+|++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--------~~~i~~~~~d~~~~~~~~~~fD~v~~ 113 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--------VPQLRWETMDVRKLDFPSASFDVVLE 113 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--------CTTCEEEECCTTSCCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--------CCCcEEEEcchhcCCCCCCcccEEEE
Confidence 5779999999999999999944334899999999999999998742 24789999999988655578999999
Q ss_pred hhHHhhcC-------------chhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLT-------------DDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hlt-------------D~el~~~l~~~~~~LkPG 262 (262)
+.+++|+. ..+...+|+++.++|+||
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 152 (215)
T 2pxx_A 114 KGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG 152 (215)
T ss_dssp ESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE
T ss_pred CcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC
Confidence 99998886 334568999999999986
No 38
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.63 E-value=5.2e-16 Score=133.39 Aligned_cols=94 Identities=16% Similarity=0.163 Sum_probs=82.9
Q ss_pred CCceeeEeeccccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
++.+|||+|||+|.++..++ +.+. +|+++|+|+.|++.|+++... .+++++++|+.+++...++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~-~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~fD~v~ 112 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAH-EHGASYVLGLDLSEKMLARARAAGPD---------TGITYERADLDKLHLPQDSFDLAY 112 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHH-HTTCSEEEEEESCHHHHHHHHHTSCS---------SSEEEEECCGGGCCCCTTCEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHH-HCCCCeEEEEcCCHHHHHHHHHhccc---------CCceEEEcChhhccCCCCCceEEE
Confidence 46799999999999999999 4455 899999999999999998642 268999999988765557999999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.+++|+++.. .+|+++.++|+||
T Consensus 113 ~~~~l~~~~~~~--~~l~~~~~~L~pg 137 (243)
T 3bkw_A 113 SSLALHYVEDVA--RLFRTVHQALSPG 137 (243)
T ss_dssp EESCGGGCSCHH--HHHHHHHHHEEEE
T ss_pred EeccccccchHH--HHHHHHHHhcCcC
Confidence 999999998876 9999999999986
No 39
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.62 E-value=3.8e-16 Score=135.88 Aligned_cols=95 Identities=16% Similarity=0.197 Sum_probs=83.8
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+.....+|+++|+|+.|++.|++++. ..+++|+++|+.+++...++||+|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~~~~~~fD~v~~ 114 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---------SPVVCYEQKAIEDIAIEPDAYNVVLS 114 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---------CTTEEEEECCGGGCCCCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---------cCCeEEEEcchhhCCCCCCCeEEEEE
Confidence 578999999999999999994433399999999999999999874 24789999999988765689999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|+.+.. .+|+++.++|+||
T Consensus 115 ~~~l~~~~~~~--~~l~~~~~~Lkpg 138 (253)
T 3g5l_A 115 SLALHYIASFD--DICKKVYINLKSS 138 (253)
T ss_dssp ESCGGGCSCHH--HHHHHHHHHEEEE
T ss_pred chhhhhhhhHH--HHHHHHHHHcCCC
Confidence 99999998876 9999999999996
No 40
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=6.1e-16 Score=134.40 Aligned_cols=93 Identities=20% Similarity=0.273 Sum_probs=82.2
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
.++.+|||+|||+|.++..|+... ..+|+++|+|+.|++.|+++. .+++|+.+|+++++ .+++||+|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~-~~~~fD~v 99 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-----------PNTNFGKADLATWK-PAQKADLL 99 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----------TTSEEEECCTTTCC-CSSCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----------CCcEEEECChhhcC-ccCCcCEE
Confidence 357799999999999999999443 668999999999999999873 26899999999987 45799999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++.+++|++|.. .+|+++.++|+||
T Consensus 100 ~~~~~l~~~~~~~--~~l~~~~~~L~pg 125 (259)
T 2p35_A 100 YANAVFQWVPDHL--AVLSQLMDQLESG 125 (259)
T ss_dssp EEESCGGGSTTHH--HHHHHHGGGEEEE
T ss_pred EEeCchhhCCCHH--HHHHHHHHhcCCC
Confidence 9999999998877 9999999999996
No 41
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=1.1e-15 Score=132.64 Aligned_cols=112 Identities=16% Similarity=0.202 Sum_probs=89.9
Q ss_pred HHHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEE
Q 024811 138 SEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF 217 (262)
Q Consensus 138 s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~ 217 (262)
...++..++... ...++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++... ..++.++
T Consensus 26 ~~~~~~~~~~~~----~~~~~~~vLDlGcG~G~~~~~l~-~~~~~v~gvD~s~~~l~~a~~~~~~~-------~~~v~~~ 93 (252)
T 1wzn_A 26 EIDFVEEIFKED----AKREVRRVLDLACGTGIPTLELA-ERGYEVVGLDLHEEMLRVARRKAKER-------NLKIEFL 93 (252)
T ss_dssp HHHHHHHHHHHT----CSSCCCEEEEETCTTCHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCCEEE
T ss_pred HHHHHHHHHHHh----cccCCCEEEEeCCCCCHHHHHHH-HCCCeEEEEECCHHHHHHHHHHHHhc-------CCceEEE
Confidence 345666666532 12346799999999999999999 55778999999999999999987542 2368999
Q ss_pred EcCCCCCCCCCCccchhhhhh-HHhhcCchhHHHHHHHHHhhccCC
Q 024811 218 CVPLQDFTPETGRYDVIWVQW-CIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 218 ~~d~~~~~~~~~~yDlI~s~~-vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++|+.+++++ ++||+|++.+ +++|++.++...+|+++.++|+||
T Consensus 94 ~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 138 (252)
T 1wzn_A 94 QGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG 138 (252)
T ss_dssp ESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred ECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCC
Confidence 9999988654 6899999874 567777777789999999999996
No 42
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.61 E-value=4.4e-16 Score=139.54 Aligned_cols=99 Identities=11% Similarity=0.049 Sum_probs=76.9
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
..++.+|||+|||+|.++..|+ +.+.+|++||+|+.|++.|++++... ....++...+........++||+|
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La-~~g~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKAL-ERGASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCSEE
T ss_pred CCCcCEEEEEeCcchHHHHHHH-hcCCEEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCccEE
Confidence 3457899999999999999999 66789999999999999999987531 112233222220001113689999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|+.++||++.++...+++++.++| ||
T Consensus 115 v~~~~l~~~~~~~~~~~l~~l~~lL-PG 141 (261)
T 3iv6_A 115 LNDRLINRFTTEEARRACLGMLSLV-GS 141 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHH-TT
T ss_pred EEhhhhHhCCHHHHHHHHHHHHHhC-cC
Confidence 9999999999988889999999999 87
No 43
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.61 E-value=7e-16 Score=135.63 Aligned_cols=100 Identities=16% Similarity=0.174 Sum_probs=85.1
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
..++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++.... ...+++|+++|+.+++.+.++||+|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~fD~i 118 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSG-----LQNRVTGIVGSMDDLPFRNEELDLI 118 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcC-----CCcCcEEEEcChhhCCCCCCCEEEE
Confidence 34678999999999999999995434489999999999999999875421 2246999999999987656799999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|+.+++|+ +.+ .+|+++.++|+||
T Consensus 119 ~~~~~~~~~-~~~--~~l~~~~~~Lkpg 143 (267)
T 3kkz_A 119 WSEGAIYNI-GFE--RGLNEWRKYLKKG 143 (267)
T ss_dssp EESSCGGGT-CHH--HHHHHHGGGEEEE
T ss_pred EEcCCceec-CHH--HHHHHHHHHcCCC
Confidence 999999999 655 8999999999996
No 44
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.61 E-value=6.5e-16 Score=134.33 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=84.6
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
..++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++.... ...+++|+++|+.+++.++++||+|
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~fD~v 118 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKAN-----CADRVKGITGSMDNLPFQNEELDLI 118 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcC-----CCCceEEEECChhhCCCCCCCEEEE
Confidence 34567999999999999999995544499999999999999999876431 1235899999999887666899999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|+.+++|+ +.+ .+|+++.++|+||
T Consensus 119 ~~~~~l~~~-~~~--~~l~~~~~~L~pg 143 (257)
T 3f4k_A 119 WSEGAIYNI-GFE--RGMNEWSKYLKKG 143 (257)
T ss_dssp EEESCSCCC-CHH--HHHHHHHTTEEEE
T ss_pred EecChHhhc-CHH--HHHHHHHHHcCCC
Confidence 999999999 555 8999999999996
No 45
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.61 E-value=6.7e-16 Score=137.06 Aligned_cols=97 Identities=18% Similarity=0.107 Sum_probs=86.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++... ..+++++++|+.++.+ .++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~-~~g~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLS-LLGYDVTSWDHNENSIAFLNETKEKE-------NLNISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCGGGCCC-CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHH-HCCCeEEEEECCHHHHHHHHHHHHHc-------CCceEEEEeccccccc-cCCccEEEE
Confidence 47799999999999999999 55779999999999999999987542 1278999999998876 579999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|++++++..+++++.++|+||
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~Lkpg 216 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVG 216 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEE
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998889999999999986
No 46
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.61 E-value=8.9e-16 Score=129.26 Aligned_cols=99 Identities=13% Similarity=0.065 Sum_probs=84.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++...+.+|+++|+|+.|++.|++++... ..+++++++|+.+++.++++||+|++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-------NFKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH-------TCCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEECchhhCCCCCCceeEEEE
Confidence 46799999999999865555466779999999999999999987542 23688999999988765579999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|++.++...+++++.++|+||
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~Lkpg 121 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPG 121 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCC
Confidence 99999997667779999999999996
No 47
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.61 E-value=4.4e-16 Score=131.74 Aligned_cols=90 Identities=14% Similarity=0.164 Sum_probs=79.8
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..+ ...+|+++|+|+.|++.|+++. .++.++++|+.+++..+++||+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-----------PEATWVRAWGEALPFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-----------TTSEEECCCTTSCCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-----------CCcEEEEcccccCCCCCCcEEEEEE
Confidence 5779999999999999887 2348999999999999999986 2578999999988766679999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
..+++|+++.+ .+++++.++|+||
T Consensus 102 ~~~l~~~~~~~--~~l~~~~~~L~pg 125 (211)
T 2gs9_A 102 FTTLEFVEDVE--RVLLEARRVLRPG 125 (211)
T ss_dssp ESCTTTCSCHH--HHHHHHHHHEEEE
T ss_pred cChhhhcCCHH--HHHHHHHHHcCCC
Confidence 99999999877 9999999999986
No 48
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.61 E-value=4.4e-16 Score=132.27 Aligned_cols=98 Identities=15% Similarity=0.160 Sum_probs=85.2
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
++.+|||+|||+|.++..++... ..+|+++|+|+.|++.|++++... ...+++|+++|+.+++...++||+|
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~~~~~~~~fD~v 110 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL------GLKNVEVLKSEENKIPLPDNTVDFI 110 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH------TCTTEEEEECBTTBCSSCSSCEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEecccccCCCCCCCeeEE
Confidence 57799999999999999999543 258999999999999999987543 2236899999999887666789999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++.+++|+++.. .+++++.++|+||
T Consensus 111 ~~~~~l~~~~~~~--~~l~~~~~~Lkpg 136 (219)
T 3dh0_A 111 FMAFTFHELSEPL--KFLEELKRVAKPF 136 (219)
T ss_dssp EEESCGGGCSSHH--HHHHHHHHHEEEE
T ss_pred EeehhhhhcCCHH--HHHHHHHHHhCCC
Confidence 9999999998876 9999999999986
No 49
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.61 E-value=7.5e-16 Score=133.41 Aligned_cols=92 Identities=11% Similarity=0.073 Sum_probs=80.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC--CCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~--~~~~~~yDl 233 (262)
.++.+|||||||+|.++..|+ +.+.+|+++|+|+.|++.|+++ ++++++|+.++ +..+++||+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~--------------~~~~~~d~~~~~~~~~~~~fD~ 104 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCK-EEGIESIGVDINEDMIKFCEGK--------------FNVVKSDAIEYLKSLPDKYLDG 104 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHH-HHTCCEEEECSCHHHHHHHHTT--------------SEEECSCHHHHHHTSCTTCBSE
T ss_pred cCCCeEEEEeCCCCHHHHHHH-hCCCcEEEEECCHHHHHHHHhh--------------cceeeccHHHHhhhcCCCCeeE
Confidence 356899999999999999999 4577899999999999999885 46777887764 334579999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+|+.+++|++++++..+|+++.++|+||
T Consensus 105 i~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 133 (240)
T 3dli_A 105 VMISHFVEHLDPERLFELLSLCYSKMKYS 133 (240)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHHBCTT
T ss_pred EEECCchhhCCcHHHHHHHHHHHHHcCCC
Confidence 99999999999998889999999999997
No 50
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.61 E-value=1e-15 Score=135.84 Aligned_cols=98 Identities=18% Similarity=0.234 Sum_probs=85.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-CCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-~~~~~yDlI~ 235 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++... ....+++|+++|+.++. ..+++||+|+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMA-ERGHQVILCDLSAQMIDRAKQAAEAK-----GVSDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHC------CCGGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhc-----CCCcceEEEEcCHHHhhhhcCCCceEEE
Confidence 36799999999999999999 55779999999999999999987542 11257899999999886 3457999999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.+++|+++++ .+|+++.++|+||
T Consensus 142 ~~~~l~~~~~~~--~~l~~~~~~Lkpg 166 (285)
T 4htf_A 142 FHAVLEWVADPR--SVLQTLWSVLRPG 166 (285)
T ss_dssp EESCGGGCSCHH--HHHHHHHHTEEEE
T ss_pred ECchhhcccCHH--HHHHHHHHHcCCC
Confidence 999999999887 9999999999996
No 51
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.60 E-value=6e-16 Score=132.72 Aligned_cols=93 Identities=16% Similarity=0.233 Sum_probs=80.8
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++. +++++++|+.++++ +++||+|+|
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~-~~~~~v~~~D~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFT-KEFGDTAGLELSEDMLTHARKRLP-----------DATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHH-HHHSEEEEEESCHHHHHHHHHHCT-----------TCEEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHH-HhCCcEEEEeCCHHHHHHHHHhCC-----------CCEEEECCHHHccc-CCCCcEEEE
Confidence 46799999999999999999 556699999999999999999752 57899999998866 479999996
Q ss_pred h-hHHhhcCc-hhHHHHHHHHHhhccCC
Q 024811 237 Q-WCIGHLTD-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~-~vl~hltD-~el~~~l~~~~~~LkPG 262 (262)
. .+++|+.+ ++...+|+++.++|+||
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pg 134 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPG 134 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEE
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCC
Confidence 5 49999976 56778999999999986
No 52
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.60 E-value=4e-16 Score=138.61 Aligned_cols=116 Identities=16% Similarity=0.084 Sum_probs=90.3
Q ss_pred hHHHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEE
Q 024811 137 GSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF 216 (262)
Q Consensus 137 ~s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f 216 (262)
....+|..++.. .++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++...... ....++.+
T Consensus 44 ~~~~~l~~~l~~-------~~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~--~~~~~~~~ 113 (293)
T 3thr_A 44 EYKAWLLGLLRQ-------HGCHRVLDVACGTGVDSIMLV-EEGFSVTSVDASDKMLKYALKERWNRRKE--PAFDKWVI 113 (293)
T ss_dssp HHHHHHHHHHHH-------TTCCEEEETTCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTTS--HHHHTCEE
T ss_pred HHHHHHHHHhcc-------cCCCEEEEecCCCCHHHHHHH-HCCCeEEEEECCHHHHHHHHHhhhhcccc--cccceeeE
Confidence 334556665542 246799999999999999999 55779999999999999999876321110 01246788
Q ss_pred EEcCCCCCC---CCCCccchhhhh-hHHhhcCc-----hhHHHHHHHHHhhccCC
Q 024811 217 FCVPLQDFT---PETGRYDVIWVQ-WCIGHLTD-----DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 217 ~~~d~~~~~---~~~~~yDlI~s~-~vl~hltD-----~el~~~l~~~~~~LkPG 262 (262)
..+|+.+++ +..++||+|+|+ .+++|+++ ++...+|+++.++|+||
T Consensus 114 ~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkpg 168 (293)
T 3thr_A 114 EEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG 168 (293)
T ss_dssp EECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEE
T ss_pred eecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCC
Confidence 999988865 445799999998 89999999 55669999999999996
No 53
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.60 E-value=6.5e-16 Score=132.58 Aligned_cols=112 Identities=18% Similarity=0.261 Sum_probs=90.8
Q ss_pred hHHHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEE
Q 024811 137 GSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF 216 (262)
Q Consensus 137 ~s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f 216 (262)
....++..++... ..++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++... ..++++
T Consensus 22 ~~~~~~~~~l~~~-----~~~~~~vLdiG~G~G~~~~~l~-~~~~~~~~~D~s~~~~~~a~~~~~~~-------~~~~~~ 88 (246)
T 1y8c_A 22 KWSDFIIEKCVEN-----NLVFDDYLDLACGTGNLTENLC-PKFKNTWAVDLSQEMLSEAENKFRSQ-------GLKPRL 88 (246)
T ss_dssp HHHHHHHHHHHTT-----TCCTTEEEEETCTTSTTHHHHG-GGSSEEEEECSCHHHHHHHHHHHHHT-------TCCCEE
T ss_pred HHHHHHHHHHHHh-----CCCCCeEEEeCCCCCHHHHHHH-HCCCcEEEEECCHHHHHHHHHHHhhc-------CCCeEE
Confidence 3345566666532 1246799999999999999999 55778999999999999999987532 126899
Q ss_pred EEcCCCCCCCCCCccchhhhhh-HHhhcCc-hhHHHHHHHHHhhccCC
Q 024811 217 FCVPLQDFTPETGRYDVIWVQW-CIGHLTD-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 217 ~~~d~~~~~~~~~~yDlI~s~~-vl~hltD-~el~~~l~~~~~~LkPG 262 (262)
+++|+.+++.+ ++||+|+++. +++|+++ ++...+|+++.++|+||
T Consensus 89 ~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pg 135 (246)
T 1y8c_A 89 ACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG 135 (246)
T ss_dssp ECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE
T ss_pred EecccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCC
Confidence 99999988665 7899999998 9999955 56679999999999986
No 54
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.60 E-value=4.9e-16 Score=133.97 Aligned_cols=98 Identities=15% Similarity=0.028 Sum_probs=85.6
Q ss_pred CceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhh
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~ 237 (262)
+.+|||+|||+|.++..|+ ..+.+|+++|+|+.|++.|++++.... ...+++|+++|+.++.+. ++||+|+++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 139 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMA-SPERFVVGLDISESALAKANETYGSSP-----KAEYFSFVKEDVFTWRPT-ELFDLIFDY 139 (235)
T ss_dssp CEEEEEETCTTCHHHHHHC-BTTEEEEEECSCHHHHHHHHHHHTTSG-----GGGGEEEECCCTTTCCCS-SCEEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHH-hCCCeEEEEECCHHHHHHHHHHhhccC-----CCcceEEEECchhcCCCC-CCeeEEEEC
Confidence 4699999999999999998 667789999999999999999875421 124699999999998764 699999999
Q ss_pred hHHhhcCchhHHHHHHHHHhhccCC
Q 024811 238 WCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 238 ~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.+++|+++++...+|+++.++|+||
T Consensus 140 ~~l~~~~~~~~~~~l~~~~~~Lkpg 164 (235)
T 3lcc_A 140 VFFCAIEPEMRPAWAKSMYELLKPD 164 (235)
T ss_dssp SSTTTSCGGGHHHHHHHHHHHEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHHCCCC
Confidence 9999999777779999999999996
No 55
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.59 E-value=1.8e-15 Score=135.43 Aligned_cols=100 Identities=21% Similarity=0.268 Sum_probs=83.2
Q ss_pred CceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhh
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~ 237 (262)
+.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++..... ....+++|+++|+.++++ +++||+|++.
T Consensus 83 ~~~vLDlGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~v~~~~~d~~~~~~-~~~fD~v~~~ 157 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFL-DLGWEVTALELSTSVLAAFRKRLAEAPA---DVRDRCTLVQGDMSAFAL-DKRFGTVVIS 157 (299)
T ss_dssp CSCEEEETCTTTTTHHHHH-TTTCCEEEEESCHHHHHHHHHHHHTSCH---HHHTTEEEEECBTTBCCC-SCCEEEEEEC
T ss_pred CCcEEEEeccCCHHHHHHH-HcCCeEEEEECCHHHHHHHHHHHhhccc---ccccceEEEeCchhcCCc-CCCcCEEEEC
Confidence 4599999999999999999 5577899999999999999998754210 000468999999999876 4799998865
Q ss_pred -hHHhhcCchhHHHHHHHHHhhccCC
Q 024811 238 -WCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 238 -~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.+++|++++++..+|+++.++|+||
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~L~pg 183 (299)
T 3g2m_A 158 SGSINELDEADRRGLYASVREHLEPG 183 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHEEEE
T ss_pred CcccccCCHHHHHHHHHHHHHHcCCC
Confidence 6788888777889999999999996
No 56
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.1e-15 Score=136.84 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=84.8
Q ss_pred CCceeeEeeccccHHHHHHHHh--cCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC------
Q 024811 157 QHLVALDCGSGIGRITKNLLIR--YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET------ 228 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~--~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~------ 228 (262)
++.+|||||||+|.++..|+.. .+.+|+++|+|+.|++.|++++.... ....+++|+++|+++++...
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~~~~~ 111 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP----DTYKNVSFKISSSDDFKFLGADSVDK 111 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-----CCTTEEEEECCTTCCGGGCTTTTTS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc----CCCCceEEEEcCHHhCCccccccccC
Confidence 5789999999999999999953 36799999999999999999875420 12358999999999987654
Q ss_pred CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++||+|+++.++||+ +.. .+++++.++|+||
T Consensus 112 ~~fD~V~~~~~l~~~-~~~--~~l~~~~~~Lkpg 142 (299)
T 3g5t_A 112 QKIDMITAVECAHWF-DFE--KFQRSAYANLRKD 142 (299)
T ss_dssp SCEEEEEEESCGGGS-CHH--HHHHHHHHHEEEE
T ss_pred CCeeEEeHhhHHHHh-CHH--HHHHHHHHhcCCC
Confidence 699999999999999 665 9999999999996
No 57
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.59 E-value=3e-15 Score=127.58 Aligned_cols=104 Identities=14% Similarity=0.085 Sum_probs=86.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++ ..+.+|+++|+|+.|++.|++++...... .....++++++.|+.+++...++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELA-SKGYSVTGIDINSEAIRLAETAARSPGLN-QKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTTCCSCC-SSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHhcCCc-cccCcceEEEEecccccCCCCCceeEEEE
Confidence 47799999999999999999 55779999999999999999987542110 01123689999999988766679999999
Q ss_pred hhHHhhcCchh-HHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDD-FVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~e-l~~~l~~~~~~LkPG 262 (262)
+.+++|+++++ ...+++++.++|+||
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pg 134 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPG 134 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCC
Confidence 99999999865 568999999999986
No 58
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.59 E-value=3e-15 Score=123.58 Aligned_cols=94 Identities=18% Similarity=0.180 Sum_probs=83.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++ ..+.+|+++|+|+.+++.+++++. ++.+++.|+.+++.+.++||+|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~-~~~~~v~~~D~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~~~~~~~D~i~~ 113 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLS-KQGHDVLGTDLDPILIDYAKQDFP-----------EARWVVGDLSVDQISETDFDLIVS 113 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHH-HTTCEEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTTSCCCCCCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHH-HCCCcEEEEcCCHHHHHHHHHhCC-----------CCcEEEcccccCCCCCCceeEEEE
Confidence 46799999999999999999 557799999999999999999762 578999999987655578999999
Q ss_pred h-hHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 Q-WCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~-~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+ .+++|+++++...+++++.++|+||
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~l~~~ 140 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALANIHRALGAD 140 (195)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred CCcHHhhcChHHHHHHHHHHHHHhCCC
Confidence 8 6899998887789999999999986
No 59
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=1.7e-15 Score=134.19 Aligned_cols=91 Identities=14% Similarity=0.209 Sum_probs=82.4
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++ .++.|+.+|++++++ +++||+|++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~-~~~fD~v~~ 123 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIA-QSGAEVLGTDNAATMIEKARQNY-----------PHLHFDVADARNFRV-DKPLDAVFS 123 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHC-----------TTSCEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHH-hCCCeEEEEECCHHHHHHHHhhC-----------CCCEEEECChhhCCc-CCCcCEEEE
Confidence 56799999999999999999 46779999999999999999875 267899999999876 479999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|++|++ .+|+++.++|+||
T Consensus 124 ~~~l~~~~d~~--~~l~~~~~~Lkpg 147 (279)
T 3ccf_A 124 NAMLHWVKEPE--AAIASIHQALKSG 147 (279)
T ss_dssp ESCGGGCSCHH--HHHHHHHHHEEEE
T ss_pred cchhhhCcCHH--HHHHHHHHhcCCC
Confidence 99999999887 9999999999996
No 60
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.58 E-value=3.2e-15 Score=133.24 Aligned_cols=97 Identities=14% Similarity=0.199 Sum_probs=84.9
Q ss_pred CCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.++.+|||+|||+|.++..|+... ..+|+++|+|+.|++.|++++... ..+++|++.|+.+++++ ++||+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~~v~~~~~d~~~~~~~-~~fD~ 92 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-------PYDSEFLEGDATEIELN-DKYDI 92 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-------SSEEEEEESCTTTCCCS-SCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEEcchhhcCcC-CCeeE
Confidence 457899999999999999999432 358999999999999999987542 23799999999998764 69999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+++.+++|++|.+ .+++++.++|+||
T Consensus 93 v~~~~~l~~~~~~~--~~l~~~~~~Lkpg 119 (284)
T 3gu3_A 93 AICHAFLLHMTTPE--TMLQKMIHSVKKG 119 (284)
T ss_dssp EEEESCGGGCSSHH--HHHHHHHHTEEEE
T ss_pred EEECChhhcCCCHH--HHHHHHHHHcCCC
Confidence 99999999999987 9999999999996
No 61
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.58 E-value=3.1e-16 Score=137.05 Aligned_cols=97 Identities=12% Similarity=0.008 Sum_probs=79.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC--CCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~--~~~~~yDlI 234 (262)
++.+|||||||+|..+..+++....+|++||+|+.|++.|+++.... ..+++++.+|+++.. .++++||.|
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~FD~i 132 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-------THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGC-------SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhC-------CCceEEEeehHHhhcccccccCCceE
Confidence 57899999999999999998444468999999999999999987542 346888888877642 234678887
Q ss_pred h-----hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 W-----VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~-----s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+ +..+++|+.+.+ .+++++.++||||
T Consensus 133 ~~D~~~~~~~~~~~~~~~--~~~~e~~rvLkPG 163 (236)
T 3orh_A 133 LYDTYPLSEETWHTHQFN--FIKNHAFRLLKPG 163 (236)
T ss_dssp EECCCCCBGGGTTTHHHH--HHHHTHHHHEEEE
T ss_pred EEeeeecccchhhhcchh--hhhhhhhheeCCC
Confidence 5 466788888877 9999999999997
No 62
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.58 E-value=2.1e-15 Score=129.57 Aligned_cols=96 Identities=19% Similarity=0.210 Sum_probs=82.4
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++ +. .+|+++|+|+.|++.|++++... ..+++++++|+.+++.+ ++||+|++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~-~~-~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~-~~fD~v~~ 102 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLA-DH-YEVTGVDLSEEMLEIAQEKAMET-------NRHVDFWVQDMRELELP-EPVDAITI 102 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHT-TT-SEEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCGGGCCCS-SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHh-hC-CeEEEEECCHHHHHHHHHhhhhc-------CCceEEEEcChhhcCCC-CCcCEEEE
Confidence 45799999999999999999 54 78999999999999999987532 23689999999888655 78999999
Q ss_pred hh-HHhhcCc-hhHHHHHHHHHhhccCC
Q 024811 237 QW-CIGHLTD-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~-vl~hltD-~el~~~l~~~~~~LkPG 262 (262)
.. +++|+.+ ++...+++++.++|+||
T Consensus 103 ~~~~~~~~~~~~~~~~~l~~~~~~L~pg 130 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFDSAARLLTDG 130 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHHEEEE
T ss_pred eCCchhhcCCHHHHHHHHHHHHHhcCCC
Confidence 87 9999954 56678999999999996
No 63
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.57 E-value=2.8e-15 Score=135.29 Aligned_cols=100 Identities=12% Similarity=0.052 Sum_probs=85.6
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
..++.+|||+|||+|.++..|+...+.+|+++|+|+.|++.|++++.... ...+++|+++|+.+++...++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELR-----IDDHVRSRVCNMLDTPFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCceEEEECChhcCCCCCCCEeEE
Confidence 34678999999999999999995547789999999999999999876431 1237999999999987656799999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++.+++|+ +.. .+|+++.++|+||
T Consensus 190 ~~~~~l~~~-~~~--~~l~~~~~~Lkpg 214 (312)
T 3vc1_A 190 WNNESTMYV-DLH--DLFSEHSRFLKVG 214 (312)
T ss_dssp EEESCGGGS-CHH--HHHHHHHHHEEEE
T ss_pred EECCchhhC-CHH--HHHHHHHHHcCCC
Confidence 999999999 444 8999999999996
No 64
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.57 E-value=3.2e-15 Score=125.60 Aligned_cols=95 Identities=18% Similarity=0.076 Sum_probs=80.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++ +|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++... ..+++++++|+.+++.+.++||+|++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLA-SLGYEVTAVDQSSVGLAKAKQLAQEK-------GVKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHH-------TCCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CC-CEEEECCCCCHhHHHHH-hCCCeEEEEECCHHHHHHHHHHHHhc-------CCceEEEEcChhhcCCCcCCccEEEE
Confidence 35 99999999999999999 55779999999999999999987542 12689999999988655579999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+ +.|++.++...+++++.++|+||
T Consensus 101 ~--~~~~~~~~~~~~l~~~~~~L~pg 124 (202)
T 2kw5_A 101 I--FCHLPSSLRQQLYPKVYQGLKPG 124 (202)
T ss_dssp E--CCCCCHHHHHHHHHHHHTTCCSS
T ss_pred E--hhcCCHHHHHHHHHHHHHhcCCC
Confidence 5 45776667779999999999997
No 65
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.56 E-value=4.8e-15 Score=123.03 Aligned_cols=100 Identities=9% Similarity=0.025 Sum_probs=76.5
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-CCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-~~~~~yDlI 234 (262)
.++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++... ...+++|++.+.+++. ..+++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la-~~~~~v~~vD~s~~~l~~a~~~~~~~------~~~~v~~~~~~~~~l~~~~~~~fD~v 93 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLA-GLSKKVYAFDVQEQALGKTSQRLSDL------GIENTELILDGHENLDHYVREPIRAA 93 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHH-TTSSEEEEEESCHHHHHHHHHHHHHH------TCCCEEEEESCGGGGGGTCCSCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHH-HhCCEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEeCcHHHHHhhccCCcCEE
Confidence 357899999999999999999 55889999999999999999998643 1247899998877742 124689999
Q ss_pred hhhhH-Hhh-----c-CchhHHHHHHHHHhhccCC
Q 024811 235 WVQWC-IGH-----L-TDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~v-l~h-----l-tD~el~~~l~~~~~~LkPG 262 (262)
+++.. +++ . ...+...+|+++.+.|+||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 128 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG 128 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEE
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC
Confidence 98842 222 1 1134457899999999996
No 66
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.56 E-value=8.2e-15 Score=129.58 Aligned_cols=101 Identities=14% Similarity=-0.018 Sum_probs=83.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~yDlI~ 235 (262)
++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++.... ...++.|+++|+.+.+. .+++||+|+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~fD~v~ 138 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMK-----RRFKVFFRAQDSYGRHMDLGKEFDVIS 138 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSC-----CSSEEEEEESCTTTSCCCCSSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-----CCccEEEEECCccccccCCCCCcCEEE
Confidence 577999999999999999885444589999999999999999875421 12468999999998754 357899999
Q ss_pred hhhHHhh--cCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGH--LTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~h--ltD~el~~~l~~~~~~LkPG 262 (262)
++.++|| .+.++...+|+++.++|+||
T Consensus 139 ~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg 167 (298)
T 1ri5_A 139 SQFSFHYAFSTSESLDIAQRNIARHLRPG 167 (298)
T ss_dssp EESCGGGGGSSHHHHHHHHHHHHHTEEEE
T ss_pred ECchhhhhcCCHHHHHHHHHHHHHhcCCC
Confidence 9999998 44556669999999999996
No 67
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.55 E-value=1.5e-15 Score=135.93 Aligned_cols=99 Identities=15% Similarity=0.209 Sum_probs=74.4
Q ss_pred CCceeeEeeccccHHHHHHHH---hcCCc----EEEEeCCHHHHHHHHhhcccccccCCCCCcceE--EEEcCCCCCC--
Q 024811 157 QHLVALDCGSGIGRITKNLLI---RYFNE----VDLLEPVSHFLDAARESLAPENHMAPDMHKATN--FFCVPLQDFT-- 225 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~---~~~~~----V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~--f~~~d~~~~~-- 225 (262)
++.+|||||||+|.++..++. ..++. ++++|+|+.|++.|++++.... ...+++ +.+.+.+++.
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~ 126 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS-----NLENVKFAWHKETSSEYQSR 126 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS-----SCTTEEEEEECSCHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc-----CCCcceEEEEecchhhhhhh
Confidence 467999999999987765442 22232 3999999999999999874311 112444 4456665543
Q ss_pred ----CCCCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 226 ----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 226 ----~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++||+|+|+.++||++|++ ++|++++++||||
T Consensus 127 ~~~~~~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~Lkpg 165 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQMLYYVKDIP--ATLKFFHSLLGTN 165 (292)
T ss_dssp HHTTTCCCCEEEEEEESCGGGCSCHH--HHHHHHHHTEEEE
T ss_pred hccccCCCceeEEEEeeeeeecCCHH--HHHHHHHHHcCCC
Confidence 2347899999999999999988 9999999999997
No 68
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.55 E-value=1.3e-14 Score=147.11 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=88.9
Q ss_pred CCceeeEeeccccHHHHHHHHhcC---CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~---~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
++.+|||+|||+|.++..|+ +.+ .+|++||+|+.|++.|++++............+++|+++|+.++++..++||+
T Consensus 721 ~g~rVLDVGCGTG~lai~LA-r~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLL-DYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHT-SSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHH-HhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 47799999999999999999 655 68999999999999999976432100011235799999999998877789999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++..+++|+++++...+++++.++|+||
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG 828 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK 828 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC
Confidence 99999999999998788999999999998
No 69
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.54 E-value=2.4e-15 Score=123.10 Aligned_cols=89 Identities=17% Similarity=0.181 Sum_probs=77.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++ +.+.+|+++|+|+.+++.++++. .+++++..| .+...++||+|++
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~-----------~~v~~~~~d---~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLL-EFATKLYCIDINVIALKEVKEKF-----------DSVITLSDP---KEIPDNSVDFILF 81 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHH-TTEEEEEEECSCHHHHHHHHHHC-----------TTSEEESSG---GGSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHH-hhcCeEEEEeCCHHHHHHHHHhC-----------CCcEEEeCC---CCCCCCceEEEEE
Confidence 57799999999999999999 55459999999999999999982 268899888 3334478999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|+++.+ .+++++.+.|+||
T Consensus 82 ~~~l~~~~~~~--~~l~~~~~~L~pg 105 (170)
T 3i9f_A 82 ANSFHDMDDKQ--HVISEVKRILKDD 105 (170)
T ss_dssp ESCSTTCSCHH--HHHHHHHHHEEEE
T ss_pred ccchhcccCHH--HHHHHHHHhcCCC
Confidence 99999998877 9999999999986
No 70
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.54 E-value=2.1e-15 Score=130.68 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=78.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC--CCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~--~~~~~~yDlI 234 (262)
++.+|||+|||+|.++..|+.....+|+++|+|+.|++.|+++.... ..++.++++|++++ +..+++||+|
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-------THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGC-------SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhc-------CCCeEEEecCHHHhhcccCCCceEEE
Confidence 57899999999999999998323448999999999999999987542 24789999999887 5555799999
Q ss_pred hh-hhHH--hhcCchhHHHHHHHHHhhccCC
Q 024811 235 WV-QWCI--GHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s-~~vl--~hltD~el~~~l~~~~~~LkPG 262 (262)
++ .+++ ++....+...+++++.++||||
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg 163 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPG 163 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEE
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCC
Confidence 99 5543 3333334447899999999996
No 71
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.53 E-value=7.7e-15 Score=136.86 Aligned_cols=105 Identities=14% Similarity=0.113 Sum_probs=85.3
Q ss_pred CCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhccccccc--CCCCCcceEEEEcCCCCC------C
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHM--APDMHKATNFFCVPLQDF------T 225 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~--~~~~~~~v~f~~~d~~~~------~ 225 (262)
.++.+|||+|||+|.++..|+... ..+|+++|+|+.|++.|++++...... +.....+++|+.+|++++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 357899999999999999999553 348999999999999999987432000 000124799999999986 5
Q ss_pred CCCCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 226 ~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.++++||+|+++.+++|++|.. .+|+++.++|+||
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~Lkpg 196 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKL--ALFKEIHRVLRDG 196 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHH--HHHHHHHHHEEEE
T ss_pred CCCCCEEEEEEccchhcCCCHH--HHHHHHHHHcCCC
Confidence 5557999999999999999877 9999999999996
No 72
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.53 E-value=8.4e-15 Score=131.61 Aligned_cols=106 Identities=16% Similarity=0.175 Sum_probs=82.8
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhccccccc-----------------------------
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHM----------------------------- 206 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~----------------------------- 206 (262)
++.+|||||||+|.++..|+... ..+|++||+|+.|++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 46799999999999999999553 468999999999999999987542100
Q ss_pred -----------------------CCCCCcceEEEEcCCCCCC-----CCCCccchhhhhhHHhhc----CchhHHHHHHH
Q 024811 207 -----------------------APDMHKATNFFCVPLQDFT-----PETGRYDVIWVQWCIGHL----TDDDFVSFFKR 254 (262)
Q Consensus 207 -----------------------~~~~~~~v~f~~~d~~~~~-----~~~~~yDlI~s~~vl~hl----tD~el~~~l~~ 254 (262)
......+++|+++|+.+.. ...++||+|+|..+++|+ .++++..+|++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0001147999999998654 234799999999999888 56677799999
Q ss_pred HHhhccCC
Q 024811 255 AKVNHSQT 262 (262)
Q Consensus 255 ~~~~LkPG 262 (262)
+.++|+||
T Consensus 206 ~~~~LkpG 213 (292)
T 3g07_A 206 IYRHLRPG 213 (292)
T ss_dssp HHHHEEEE
T ss_pred HHHHhCCC
Confidence 99999996
No 73
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.53 E-value=2e-14 Score=126.19 Aligned_cols=91 Identities=21% Similarity=0.241 Sum_probs=77.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|+++.. . .++++|+.+++..+++||+|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~l~~a~~~~~-----------~-~~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQ-ERGFEVVLVDPSKEMLEVAREKGV-----------K-NVVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHH-TTTCEEEEEESCHHHHHHHHHHTC-----------S-CEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHH-HcCCeEEEEeCCHHHHHHHHhhcC-----------C-CEEECcHHHCCCCCCCEEEEEE
Confidence 46799999999999999999 557789999999999999999752 1 2889999988765679999999
Q ss_pred hhHHhhc-CchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHL-TDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hl-tD~el~~~l~~~~~~LkPG 262 (262)
..++.|+ ++.. .+|+++.++|+||
T Consensus 121 ~~~~~~~~~~~~--~~l~~~~~~Lkpg 145 (260)
T 2avn_A 121 LGDVLSYVENKD--KAFSEIRRVLVPD 145 (260)
T ss_dssp CSSHHHHCSCHH--HHHHHHHHHEEEE
T ss_pred cchhhhccccHH--HHHHHHHHHcCCC
Confidence 8866666 5644 9999999999996
No 74
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.51 E-value=7.5e-15 Score=133.46 Aligned_cols=106 Identities=9% Similarity=0.063 Sum_probs=77.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCC------C--CCCC
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD------F--TPET 228 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~------~--~~~~ 228 (262)
++.+|||||||+|..+..++...+.+|++||+|+.||+.|+++............-.++|.+.|+.. + ....
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 3679999999999877766645567899999999999999998653210000000136788888822 1 1223
Q ss_pred CccchhhhhhHHhhc-CchhHHHHHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIGHL-TDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~hl-tD~el~~~l~~~~~~LkPG 262 (262)
++||+|+|++++||+ .+++...+|++++++|+||
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpG 162 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASG 162 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999986 3345668999999999997
No 75
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.50 E-value=5e-15 Score=130.87 Aligned_cols=107 Identities=12% Similarity=0.035 Sum_probs=79.5
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhccccccc--------------CC---------CCCc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM--------------AP---------DMHK 212 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~--------------~~---------~~~~ 212 (262)
.++.+|||||||+|.++..++...+.+|+++|.|+.|++.|++++...... +. ....
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 356799999999999888777454568999999999999999876321000 00 0001
Q ss_pred ceE-EEEcCCCCCCC----CCCccchhhhhhHHhhcC-c-hhHHHHHHHHHhhccCC
Q 024811 213 ATN-FFCVPLQDFTP----ETGRYDVIWVQWCIGHLT-D-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 213 ~v~-f~~~d~~~~~~----~~~~yDlI~s~~vl~hlt-D-~el~~~l~~~~~~LkPG 262 (262)
++. ++.+|+.+..| ..++||+|+|++++||+. + +++..++++++++||||
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPG 190 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPG 190 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCC
Confidence 233 88999987432 135899999999999974 3 56779999999999997
No 76
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.50 E-value=7.7e-15 Score=127.62 Aligned_cols=105 Identities=12% Similarity=0.061 Sum_probs=81.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhhccccccc--------------C-CC--------CCc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHM--------------A-PD--------MHK 212 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~l~~a~~~--------------~-~~--------~~~ 212 (262)
++.+|||+|||+|.++..++ ..+. +|+++|+|+.|++.|++++...... + .. ...
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~-~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSA-CESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTG-GGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHh-hcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 46799999999999999998 5454 8999999999999999987532100 0 00 001
Q ss_pred ce-EEEEcCCCCCCC-CC---CccchhhhhhHHhhcCch--hHHHHHHHHHhhccCC
Q 024811 213 AT-NFFCVPLQDFTP-ET---GRYDVIWVQWCIGHLTDD--DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 213 ~v-~f~~~d~~~~~~-~~---~~yDlI~s~~vl~hltD~--el~~~l~~~~~~LkPG 262 (262)
++ .++.+|+.+..+ .+ ++||+|+++.+++|+++. +...+|+++.++|+||
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg 191 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPG 191 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCC
Confidence 26 899999988754 33 689999999999977643 5669999999999996
No 77
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.50 E-value=9.7e-15 Score=131.39 Aligned_cols=101 Identities=12% Similarity=-0.044 Sum_probs=84.5
Q ss_pred CCCceeeEeeccccHHHHHHHH-h-cCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLI-R-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~-~-~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.++.+|||+|||+|.++..|+. . ...+|+++|+|+.|++.|++++.... ...+++|+++|+.+++++ ++||+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~-~~fD~ 190 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA-----LAGQITLHRQDAWKLDTR-EGYDL 190 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST-----TGGGEEEEECCGGGCCCC-SCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC-----CCCceEEEECchhcCCcc-CCeEE
Confidence 3578999999999999999851 2 24589999999999999999986421 123589999999998766 89999
Q ss_pred hhhhhHHhhcCchhH-HHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDF-VSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el-~~~l~~~~~~LkPG 262 (262)
|+++.+++|+++++. ..+++++.++|+||
T Consensus 191 v~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 220 (305)
T 3ocj_A 191 LTSNGLNIYEPDDARVTELYRRFWQALKPG 220 (305)
T ss_dssp EECCSSGGGCCCHHHHHHHHHHHHHHEEEE
T ss_pred EEECChhhhcCCHHHHHHHHHHHHHhcCCC
Confidence 999999999988763 35999999999996
No 78
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.49 E-value=2.8e-14 Score=120.86 Aligned_cols=90 Identities=18% Similarity=0.202 Sum_probs=78.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC--CCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~--~~~~~~yDlI 234 (262)
++.+|||+|||+|.++..++.. +.+|+++|+|+.|++.++++. .+++.+|+.++ +..+++||+|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~-------------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL-------------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS-------------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC-------------CcEEEcchhhcCCCCCCCccCEE
Confidence 4679999999999999999944 789999999999999999864 26788898763 3334789999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++.+++|+++++ .+++++.++|+||
T Consensus 98 ~~~~~l~~~~~~~--~~l~~~~~~L~~g 123 (230)
T 3cc8_A 98 IFGDVLEHLFDPW--AVIEKVKPYIKQN 123 (230)
T ss_dssp EEESCGGGSSCHH--HHHHHTGGGEEEE
T ss_pred EECChhhhcCCHH--HHHHHHHHHcCCC
Confidence 9999999999987 9999999999986
No 79
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.49 E-value=1.1e-14 Score=123.28 Aligned_cols=90 Identities=19% Similarity=0.146 Sum_probs=75.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC---CC-CCCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TP-ETGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~---~~-~~~~yD 232 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|+++. ++.++..|+.++ .. ...+||
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~------------~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALA-DRGIEAVGVDGDRTLVDAARAAG------------AGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHH-TTTCEEEEEESCHHHHHHHHHTC------------SSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCEEEEeCCCCCHHHHHHH-HCCCEEEEEcCCHHHHHHHHHhc------------ccccchhhHHhhcccccccCCCcc
Confidence 46899999999999999999 55779999999999999999871 456777777665 22 224699
Q ss_pred hhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|+++.+++ ..+.. .+++++.++|+||
T Consensus 119 ~v~~~~~l~-~~~~~--~~l~~~~~~L~pg 145 (227)
T 3e8s_A 119 LICANFALL-HQDII--ELLSAMRTLLVPG 145 (227)
T ss_dssp EEEEESCCC-SSCCH--HHHHHHHHTEEEE
T ss_pred EEEECchhh-hhhHH--HHHHHHHHHhCCC
Confidence 999999988 66666 9999999999986
No 80
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.48 E-value=2.2e-15 Score=130.33 Aligned_cols=97 Identities=14% Similarity=0.046 Sum_probs=82.4
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++.... ...+++|+++|+.++.+ .++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la-~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~~d~~~~~~-~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFA-LTGMRVIAIDIDPVKIALARNNAEVYG-----IADKIEFICGDFLLLAS-FLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTT-----CGGGEEEEESCHHHHGG-GCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHH-HcCCEEEEEECCHHHHHHHHHHHHHcC-----CCcCeEEEECChHHhcc-cCCCCEEEE
Confidence 47799999999999999999 567899999999999999999986421 11479999999998864 479999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|+.+.+ ..+.++.++|+||
T Consensus 151 ~~~~~~~~~~~--~~~~~~~~~L~pg 174 (241)
T 3gdh_A 151 SPPWGGPDYAT--AETFDIRTMMSPD 174 (241)
T ss_dssp CCCCSSGGGGG--SSSBCTTTSCSSC
T ss_pred CCCcCCcchhh--hHHHHHHhhcCCc
Confidence 99999988876 5777888888886
No 81
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.47 E-value=1.7e-14 Score=128.46 Aligned_cols=106 Identities=10% Similarity=0.078 Sum_probs=76.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccC-----------CCC-------------Cc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMA-----------PDM-------------HK 212 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~-----------~~~-------------~~ 212 (262)
++.+|||||||+|..+..++...+.+|+++|+|+.|++.|++++....... ... ..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 467999999999996554443346799999999999999998764210000 000 01
Q ss_pred ceEEEEcCCCC-CCC-----CCCccchhhhhhHHhhcCch--hHHHHHHHHHhhccCC
Q 024811 213 ATNFFCVPLQD-FTP-----ETGRYDVIWVQWCIGHLTDD--DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 213 ~v~f~~~d~~~-~~~-----~~~~yDlI~s~~vl~hltD~--el~~~l~~~~~~LkPG 262 (262)
.+.++.+|+.+ .++ ++++||+|+|+++++|+.+. +...+|+++.++||||
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpG 208 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPG 208 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCC
Confidence 24677788887 321 23569999999999996643 5669999999999997
No 82
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.47 E-value=3.7e-14 Score=124.56 Aligned_cols=101 Identities=13% Similarity=0.042 Sum_probs=80.9
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHH------HHHHHHhhcccccccCCCCCcceEEEEcC-C--CC
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSH------FLDAARESLAPENHMAPDMHKATNFFCVP-L--QD 223 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~------mld~Ar~~l~~a~~~~~~~~~~v~f~~~d-~--~~ 223 (262)
..++.+|||||||+|.++..++...+ .+|+++|+|+. |++.|++++... ....+++|+.+| + ..
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG-----PLGDRLTVHFNTNLSDDL 115 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS-----TTGGGEEEECSCCTTTCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc-----CCCCceEEEECChhhhcc
Confidence 34678999999999999999995433 68999999998 999999987542 112478999998 3 33
Q ss_pred CCCCCCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 224 FTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 224 ~~~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.+..+++||+|+|+.+++|+++++ .+++.++.+++||
T Consensus 116 ~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~g 152 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAVC 152 (275)
T ss_dssp GGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTTC
T ss_pred CCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCCC
Confidence 333447899999999999999987 6888888888865
No 83
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.47 E-value=1.4e-14 Score=121.18 Aligned_cols=99 Identities=12% Similarity=0.023 Sum_probs=80.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--CCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~--~~~~yDlI 234 (262)
++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++... ...+++|+++|+.++.+ ..++||+|
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEAL------GLSGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHH------TCSCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHc------CCCceEEEEccHHHHHhhccCCCccEE
Confidence 46799999999999999888554568999999999999999998643 12478999999988632 24689999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHh--hccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKV--NHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~--~LkPG 262 (262)
+++.+++|. .++...++..+.+ +|+||
T Consensus 118 ~~~~p~~~~-~~~~~~~l~~~~~~~~L~pg 146 (189)
T 3p9n_A 118 LADPPYNVD-SADVDAILAALGTNGWTREG 146 (189)
T ss_dssp EECCCTTSC-HHHHHHHHHHHHHSSSCCTT
T ss_pred EECCCCCcc-hhhHHHHHHHHHhcCccCCC
Confidence 999886664 2344589999999 99997
No 84
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.47 E-value=2.7e-14 Score=122.08 Aligned_cols=85 Identities=16% Similarity=0.161 Sum_probs=75.8
Q ss_pred CceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhh
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~ 237 (262)
+.+|||+|||+|.++..++ .. +++|+|+.|++.++++ +++++++|+.+++...++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~-~~----~~vD~s~~~~~~a~~~-------------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLK-IK----IGVEPSERMAEIARKR-------------GVFVLKGTAENLPLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHT-CC----EEEESCHHHHHHHHHT-------------TCEEEECBTTBCCSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHH-HH----hccCCCHHHHHHHHhc-------------CCEEEEcccccCCCCCCCeeEEEEc
Confidence 6789999999999999988 43 8999999999999985 3678899998886655789999999
Q ss_pred hHHhhcCchhHHHHHHHHHhhccCC
Q 024811 238 WCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 238 ~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.+++|+++++ .+|+++.++|+||
T Consensus 110 ~~l~~~~~~~--~~l~~~~~~L~pg 132 (219)
T 1vlm_A 110 TTICFVDDPE--RALKEAYRILKKG 132 (219)
T ss_dssp SCGGGSSCHH--HHHHHHHHHEEEE
T ss_pred chHhhccCHH--HHHHHHHHHcCCC
Confidence 9999998877 9999999999986
No 85
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.46 E-value=5.6e-14 Score=120.99 Aligned_cols=86 Identities=12% Similarity=0.101 Sum_probs=73.1
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCC-CCCCC-CCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ-DFTPE-TGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~-~~~~~-~~~yDlI 234 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|+++. .+++|+++|+. .++.. +++||+|
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFG-PQAARWAAYDFSPELLKLARANA-----------PHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHG-GGSSEEEEEESCHHHHHHHHHHC-----------TTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHH-HcCCEEEEEECCHHHHHHHHHhC-----------CCceEEEcchhhccCCcCCCCEEEE
Confidence 57799999999999999999 55779999999999999999983 26899999994 44444 5799999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|+ .+.. .+|+++.++|+||
T Consensus 116 ~~~------~~~~--~~l~~~~~~Lkpg 135 (226)
T 3m33_A 116 VSR------RGPT--SVILRLPELAAPD 135 (226)
T ss_dssp EEE------SCCS--GGGGGHHHHEEEE
T ss_pred EeC------CCHH--HHHHHHHHHcCCC
Confidence 997 3555 8999999999996
No 86
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.46 E-value=1.2e-13 Score=127.84 Aligned_cols=100 Identities=16% Similarity=0.243 Sum_probs=84.3
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-CCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-~~~~~yDlI 234 (262)
...+|||||||+|.++..|++.. ..+|+++|+ +.|++.|++++... ....+++|+.+|+.+.. |-++.||+|
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~p~~~D~v 252 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL-----SGSERIHGHGANLLDRDVPFPTGFDAV 252 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC-----TTGGGEEEEECCCCSSSCCCCCCCSEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc-----CcccceEEEEccccccCCCCCCCcCEE
Confidence 46799999999999999999443 347999999 99999999987542 11247999999999863 212689999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.+++||++|++...+|++++++|+||
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pg 280 (363)
T 3dp7_A 253 WMSQFLDCFSEEEVISILTRVAQSIGKD 280 (363)
T ss_dssp EEESCSTTSCHHHHHHHHHHHHHHCCTT
T ss_pred EEechhhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999889999999999997
No 87
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.46 E-value=1.3e-14 Score=142.41 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=72.4
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC--CCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~--~~~~~~yDlI 234 (262)
++.+|||||||+|.++..|+ +.+.+|++||+|+.+|+.|+...... ...+++|.+++++++ ..++++||+|
T Consensus 66 ~~~~vLDvGCG~G~~~~~la-~~ga~V~giD~~~~~i~~a~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLA-SKGATIVGIDFQQENINVCRALAEEN------PDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTS------TTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCeEEEECCCCcHHHHHHH-hCCCEEEEECCCHHHHHHHHHHHHhc------CCCceEEEECCHHHHhhhccCCCccEE
Confidence 46799999999999999999 77889999999999999999986532 224789999999887 2334789999
Q ss_pred hhhhHHhhcCchh
Q 024811 235 WVQWCIGHLTDDD 247 (262)
Q Consensus 235 ~s~~vl~hltD~e 247 (262)
+|..+|+|++|++
T Consensus 139 ~~~e~~ehv~~~~ 151 (569)
T 4azs_A 139 IGLSVFHHIVHLH 151 (569)
T ss_dssp EEESCHHHHHHHH
T ss_pred EECcchhcCCCHH
Confidence 9999999999976
No 88
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.46 E-value=7.1e-14 Score=126.01 Aligned_cols=106 Identities=10% Similarity=0.049 Sum_probs=83.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhccccccc-CCCCCcceEEEEcCCCCCC----C--CCC
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM-APDMHKATNFFCVPLQDFT----P--ETG 229 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~-~~~~~~~v~f~~~d~~~~~----~--~~~ 229 (262)
++.+|||+|||+|.++..++.....+|+++|+|+.|++.|+++....... ......+++|+++|+++.. . ..+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 46799999999999999999544678999999999999999987532100 0001236899999998874 2 235
Q ss_pred ccchhhhhhHHhhc-Cc-hhHHHHHHHHHhhccCC
Q 024811 230 RYDVIWVQWCIGHL-TD-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 230 ~yDlI~s~~vl~hl-tD-~el~~~l~~~~~~LkPG 262 (262)
+||+|+|+.++||+ .+ ++...+|+++.++|+||
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg 148 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPG 148 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCC
Confidence 89999999999998 44 45669999999999996
No 89
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.45 E-value=1.5e-13 Score=116.03 Aligned_cols=95 Identities=13% Similarity=0.142 Sum_probs=78.7
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.++.+|||+|||+|.++..++ +.+ .+|+++|+|+.|++.|++++... ...+++++++|+.+..+..++||+
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la-~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~D~ 111 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEAS-NLMPNGRIFALERNPQYLGFIRDNLKKF------VARNVTLVEAFAPEGLDDLPDPDR 111 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHH-HHCTTSEEEEEECCHHHHHHHHHHHHHH------TCTTEEEEECCTTTTCTTSCCCSE
T ss_pred CCCCEEEEECCCCCHHHHHHH-HHCCCCEEEEEeCCHHHHHHHHHHHHHh------CCCcEEEEeCChhhhhhcCCCCCE
Confidence 457899999999999999999 445 68999999999999999987543 124789999999766444468999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++..+++ + ...+++++.+.|+||
T Consensus 112 i~~~~~~~---~--~~~~l~~~~~~Lkpg 135 (204)
T 3e05_A 112 VFIGGSGG---M--LEEIIDAVDRRLKSE 135 (204)
T ss_dssp EEESCCTT---C--HHHHHHHHHHHCCTT
T ss_pred EEECCCCc---C--HHHHHHHHHHhcCCC
Confidence 99987665 3 448999999999997
No 90
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.45 E-value=1.1e-13 Score=113.93 Aligned_cols=97 Identities=14% Similarity=0.102 Sum_probs=80.1
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcc--eEEEEcCCCCCCCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA--TNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~--v~f~~~d~~~~~~~~~~yDlI 234 (262)
++.+|||+|||+|.++..++.. +.+|+++|+|+.+++.|++++... ...+ ++++++|+.+..+ .++||+|
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~------~~~~~~~~~~~~d~~~~~~-~~~~D~v 123 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLN------NLDNYDIRVVHSDLYENVK-DRKYNKI 123 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHT------TCTTSCEEEEECSTTTTCT-TSCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHc------CCCccceEEEECchhcccc-cCCceEE
Confidence 5679999999999999999944 789999999999999999987542 1233 8999999988644 4689999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++.+++|. ..+...+++++.++|+||
T Consensus 124 ~~~~~~~~~-~~~~~~~l~~~~~~L~~g 150 (194)
T 1dus_A 124 ITNPPIRAG-KEVLHRIIEEGKELLKDN 150 (194)
T ss_dssp EECCCSTTC-HHHHHHHHHHHHHHEEEE
T ss_pred EECCCcccc-hhHHHHHHHHHHHHcCCC
Confidence 999887762 334458999999999986
No 91
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.45 E-value=1.7e-13 Score=122.75 Aligned_cols=96 Identities=18% Similarity=0.083 Sum_probs=80.3
Q ss_pred CceeeEeeccc---cHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-------
Q 024811 158 HLVALDCGSGI---GRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (262)
Q Consensus 158 ~~~VLDlGcGt---G~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~------- 225 (262)
..+|||||||+ |+++..+. +. ..+|++||+|+.|++.|++++.. ..+++|+++|+.+..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~-~~~p~~~v~~vD~sp~~l~~Ar~~~~~--------~~~v~~~~~D~~~~~~~~~~~~ 148 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQ-SVNPDARVVYVDIDPMVLTHGRALLAK--------DPNTAVFTADVRDPEYILNHPD 148 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHH-HHCTTCEEEEEESSHHHHHHHHHHHTT--------CTTEEEEECCTTCHHHHHHSHH
T ss_pred CCEEEEECCCCCCCChHHHHHH-HhCCCCEEEEEECChHHHHHHHHhcCC--------CCCeEEEEeeCCCchhhhccch
Confidence 46899999999 99887776 43 35899999999999999998742 247899999997631
Q ss_pred ----CCCCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 226 ----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 226 ----~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.+..+||+|+++.++||++|.+...+|+++.++|+||
T Consensus 149 ~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pG 189 (274)
T 2qe6_A 149 VRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPG 189 (274)
T ss_dssp HHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTT
T ss_pred hhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCC
Confidence 1114799999999999999977779999999999997
No 92
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.43 E-value=2.4e-13 Score=111.29 Aligned_cols=95 Identities=14% Similarity=0.036 Sum_probs=74.9
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC-Cccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~-~~yDl 233 (262)
.++.+|||+|||+|.++..++... ..+|+++|+|+.|++.|++++.... ...++ +++.|..+.-+.. ++||+
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~-~~~~d~~~~~~~~~~~~D~ 97 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG-----VSDRI-AVQQGAPRAFDDVPDNPDV 97 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT-----CTTSE-EEECCTTGGGGGCCSCCSE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC-----CCCCE-EEecchHhhhhccCCCCCE
Confidence 357799999999999999999442 4689999999999999999875421 12257 7888885532322 68999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+++.+++| . .+++++.+.|+||
T Consensus 98 i~~~~~~~~----~--~~l~~~~~~L~~g 120 (178)
T 3hm2_A 98 IFIGGGLTA----P--GVFAAAWKRLPVG 120 (178)
T ss_dssp EEECC-TTC----T--THHHHHHHTCCTT
T ss_pred EEECCcccH----H--HHHHHHHHhcCCC
Confidence 999999988 3 7999999999997
No 93
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.43 E-value=7.1e-14 Score=118.19 Aligned_cols=92 Identities=15% Similarity=0.030 Sum_probs=77.8
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.++..|+ +.+.+|+++|+|+.+++.|++++... ...+++++.+|+.+..+..++||+|+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la-~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~D~i~ 148 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILA-HLVQHVCSVERIKGLQWQARRRLKNL------DLHNVSTRHGDGWQGWQARAPFDAII 148 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHH-HHSSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHH-HhCCEEEEEecCHHHHHHHHHHHHHc------CCCceEEEECCcccCCccCCCccEEE
Confidence 457899999999999999999 45889999999999999999998643 22478999999987655557999999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.+++|+.+ .+.+.|+||
T Consensus 149 ~~~~~~~~~~--------~~~~~L~pg 167 (210)
T 3lbf_A 149 VTAAPPEIPT--------ALMTQLDEG 167 (210)
T ss_dssp ESSBCSSCCT--------HHHHTEEEE
T ss_pred EccchhhhhH--------HHHHhcccC
Confidence 9999999986 367888875
No 94
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.43 E-value=2.1e-13 Score=124.08 Aligned_cols=98 Identities=14% Similarity=0.084 Sum_probs=82.2
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
+..+|||+|||+|.++..++... ..+++++|+ +.+++.|++++.... ...+++|..+|+.+..| ..||+|+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~p--~~~D~v~ 240 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG-----LSGRAQVVVGSFFDPLP--AGAGGYV 240 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-----CTTTEEEEECCTTSCCC--CSCSEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC-----cCcCeEEecCCCCCCCC--CCCcEEE
Confidence 45799999999999999999443 236899999 999999999875421 22579999999974323 3799999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++||++|++..++|++++++|+||
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pg 267 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSG 267 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTT
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCC
Confidence 999999999998889999999999997
No 95
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.42 E-value=2.7e-13 Score=125.07 Aligned_cols=99 Identities=12% Similarity=0.107 Sum_probs=83.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..+++....+|++||+|+ |++.|++++... ....+++++.+|+++++.+ ++||+|+|
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~-----~l~~~v~~~~~d~~~~~~~-~~~D~Ivs 122 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN-----NLTDRIVVIPGKVEEVSLP-EQVDIIIS 122 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHT-----TCTTTEEEEESCTTTCCCS-SCEEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHc-----CCCCcEEEEEcchhhCCCC-CceeEEEE
Confidence 5779999999999999999954345899999996 999999887542 1224799999999998654 68999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.++++|+.+++...++.++++.|+||
T Consensus 123 ~~~~~~~~~~~~~~~l~~~~~~Lkpg 148 (348)
T 2y1w_A 123 EPMGYMLFNERMLESYLHAKKYLKPS 148 (348)
T ss_dssp CCCBTTBTTTSHHHHHHHGGGGEEEE
T ss_pred eCchhcCChHHHHHHHHHHHhhcCCC
Confidence 99999999888778889999999986
No 96
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.41 E-value=1.6e-13 Score=130.30 Aligned_cols=134 Identities=11% Similarity=0.011 Sum_probs=97.0
Q ss_pred cccCCCCCCcccchhh-HHHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 122 GVLGGFGNVNEVDIKG-SEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 122 gvlgGy~~is~~di~~-s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..|.+|..++..-+.. ...++..++... ...++.+|||||||+|.++..++..... +|++||.|+.|++.|+++
T Consensus 141 ~~L~~Ye~Fs~~vYGEt~~~~i~~il~~l----~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n 216 (438)
T 3uwp_A 141 EKLNNYEPFSPEVYGETSFDLVAQMIDEI----KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETM 216 (438)
T ss_dssp GGSCCCSSSCGGGGGGTHHHHHHHHHHHH----CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHH
T ss_pred HHhcCcccCCCcccCCCCHHHHHHHHHhc----CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 4566788777766643 455666666521 2456889999999999999999955444 599999999999999987
Q ss_pred ccccccc---CCCCCcceEEEEcCCCCCCCCC--CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 200 LAPENHM---APDMHKATNFFCVPLQDFTPET--GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 200 l~~a~~~---~~~~~~~v~f~~~d~~~~~~~~--~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+...+.+ ......+++|+++|+.+.+... ..||+|+++.++ | .+++...|.++.+.||||
T Consensus 217 ~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F--~pdl~~aL~Ei~RvLKPG 281 (438)
T 3uwp_A 217 DREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFA-F--GPEVDHQLKERFANMKEG 281 (438)
T ss_dssp HHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTT-C--CHHHHHHHHHHHTTSCTT
T ss_pred HHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEcccc-c--CchHHHHHHHHHHcCCCC
Confidence 6421100 0001247999999999875432 379999998764 3 355568899999999998
No 97
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.41 E-value=2.5e-13 Score=122.87 Aligned_cols=100 Identities=12% Similarity=0.113 Sum_probs=84.3
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
.+..+|||+|||+|.++..++... ..+++++|+| .+++.|++++.... ...+++|+.+|+.+.+++ ..||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~-~~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG-----VASRYHTIAGSAFEVDYG-NDYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT-----CGGGEEEEESCTTTSCCC-SCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC-----CCcceEEEecccccCCCC-CCCcEE
Confidence 356799999999999999999543 3479999999 99999999875421 123699999999886544 359999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++++++||+++++...+|+++.++|+||
T Consensus 237 ~~~~~l~~~~~~~~~~~l~~~~~~L~pg 264 (335)
T 2r3s_A 237 LLPNFLHHFDVATCEQLLRKIKTALAVE 264 (335)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred EEcchhccCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999998889999999999986
No 98
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.41 E-value=4.6e-13 Score=114.18 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=78.5
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC--CCCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~--~~~~~yDl 233 (262)
++.+|||+|||+|.++..++... ..+|++||+|+.|++.|++++... ...++.|+++|+.++. ...++||+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~~D~ 114 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV------GVPNIKLLWVDGSDLTDYFEDGEIDR 114 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH------CCSSEEEEECCSSCGGGTSCTTCCSE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc------CCCCEEEEeCCHHHHHhhcCCCCCCE
Confidence 36689999999999999999543 358999999999999999987543 1247999999999865 34468999
Q ss_pred hhhhhHHhhcCch------hHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDD------DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~------el~~~l~~~~~~LkPG 262 (262)
|+++++..+.... ....+++++.++|+||
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 149 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPEN 149 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTT
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHHcCCC
Confidence 9999764332211 1237999999999997
No 99
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.40 E-value=2.1e-13 Score=124.61 Aligned_cols=98 Identities=18% Similarity=0.200 Sum_probs=83.4
Q ss_pred CceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC--CCCCccchh
Q 024811 158 HLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDVI 234 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~--~~~~~yDlI 234 (262)
+.+|||||||+|.++..++... ..+++++|+ +.+++.|++++.... ...+++|+.+|+.+.+ ++ +.||+|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~-~~~D~v 252 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD-----LGGRVEFFEKNLLDARNFEG-GAADVV 252 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT-----CGGGEEEEECCTTCGGGGTT-CCEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC-----CCCceEEEeCCcccCcccCC-CCccEE
Confidence 6799999999999999999443 247899999 889999999875421 2246999999999875 43 579999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++++++||++|++...+|++++++|+||
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pg 280 (352)
T 3mcz_A 253 MLNDCLHYFDAREAREVIGHAAGLVKPG 280 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEE
T ss_pred EEecccccCCHHHHHHHHHHHHHHcCCC
Confidence 9999999999998889999999999996
No 100
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.40 E-value=2.7e-13 Score=116.20 Aligned_cols=99 Identities=16% Similarity=0.093 Sum_probs=76.7
Q ss_pred CCceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCccchh
Q 024811 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~yDlI 234 (262)
++.+|||+||| +|.++..++.....+|+++|+|+.|++.|++++... ..+++++++|+..+.+ .+++||+|
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERN-------NSNVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHT-------TCCCEEEECSSCSSTTTCCSCEEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHh-------CCCcEEEeCCchhhhhcccCceeEE
Confidence 57899999999 999999999443778999999999999999998642 1268999999654432 23789999
Q ss_pred hhhhHHhhcCchh-----------------HHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDD-----------------FVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~e-----------------l~~~l~~~~~~LkPG 262 (262)
+++.++++..+.+ ...+++++.++|+||
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 172 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG 172 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC
Confidence 9998776655422 257999999999986
No 101
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.40 E-value=2.9e-13 Score=115.22 Aligned_cols=102 Identities=14% Similarity=0.133 Sum_probs=75.2
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCC--ccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG--RYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~--~yDl 233 (262)
++.+|||+|||+|.++..|+... ..+|++||+|+.|++.+.++...... .....+++|+++|++++++..+ .+|+
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~--~~~~~~v~~~~~d~~~l~~~~~~d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPA--KGGLPNLLYLWATAERLPPLSGVGELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGG--GTCCTTEEEEECCSTTCCSCCCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhh--hcCCCceEEEecchhhCCCCCCCCEEEE
Confidence 57899999999999999999543 46899999999999964322211000 1123479999999999866433 3444
Q ss_pred hhhhhHH--hhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCI--GHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl--~hltD~el~~~l~~~~~~LkPG 262 (262)
+++...+ ||++|+. .+|+++.++||||
T Consensus 105 ~~~~~~~~~~~~~~~~--~~l~~~~~~Lkpg 133 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSP--EMLRGMAAVCRPG 133 (218)
T ss_dssp ESCCHHHHHHHHTSSS--HHHHHHHHTEEEE
T ss_pred EccchhhhhhhhccHH--HHHHHHHHHcCCC
Confidence 4444455 4999988 9999999999996
No 102
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.40 E-value=6.8e-14 Score=118.99 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=76.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCC--cceEEEEcCCCCCCCC--CCc-c
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH--KATNFFCVPLQDFTPE--TGR-Y 231 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~--~~v~f~~~d~~~~~~~--~~~-y 231 (262)
++.+|||+|||+|.++..++...+.+|++||+|+.|++.|++++... .. .+++|+++|+.++.+. .++ |
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~------~~~~~~v~~~~~d~~~~~~~~~~~~~f 126 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTL------KCSSEQAEVINQSSLDFLKQPQNQPHF 126 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT------TCCTTTEEEECSCHHHHTTSCCSSCCE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHh------CCCccceEEEECCHHHHHHhhccCCCC
Confidence 36799999999999999988555568999999999999999998642 12 4789999998776432 368 9
Q ss_pred chhhhhhHHhhcCchhHHHHHHHH--HhhccCC
Q 024811 232 DVIWVQWCIGHLTDDDFVSFFKRA--KVNHSQT 262 (262)
Q Consensus 232 DlI~s~~vl~hltD~el~~~l~~~--~~~LkPG 262 (262)
|+|+++.+++ ..+. ..+++.+ .++|+||
T Consensus 127 D~I~~~~~~~-~~~~--~~~l~~~~~~~~Lkpg 156 (201)
T 2ift_A 127 DVVFLDPPFH-FNLA--EQAISLLCENNWLKPN 156 (201)
T ss_dssp EEEEECCCSS-SCHH--HHHHHHHHHTTCEEEE
T ss_pred CEEEECCCCC-CccH--HHHHHHHHhcCccCCC
Confidence 9999998743 3333 3788888 5679886
No 103
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.40 E-value=5e-13 Score=114.11 Aligned_cols=93 Identities=8% Similarity=0.026 Sum_probs=76.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCc-ceEEEEcCCCCCCCCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~-~v~f~~~d~~~~~~~~~~yDlI 234 (262)
.++.+|||+|||+|.++..++.. ..+|+++|+|+.|++.|++++... ... +++++++|+.+..+....||+|
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~------g~~~~v~~~~~d~~~~~~~~~~~D~v 126 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTY------GLSPRMRAVQGTAPAALADLPLPEAV 126 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEESCTTGGGTTSCCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc------CCCCCEEEEeCchhhhcccCCCCCEE
Confidence 35789999999999999999944 889999999999999999987542 123 7899999999843333589999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++...+ +.. +++++.+.|+||
T Consensus 127 ~~~~~~------~~~-~l~~~~~~Lkpg 147 (204)
T 3njr_A 127 FIGGGG------SQA-LYDRLWEWLAPG 147 (204)
T ss_dssp EECSCC------CHH-HHHHHHHHSCTT
T ss_pred EECCcc------cHH-HHHHHHHhcCCC
Confidence 987633 233 999999999997
No 104
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.40 E-value=2.9e-13 Score=114.14 Aligned_cols=93 Identities=16% Similarity=0.114 Sum_probs=77.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++... ...+++++++|+.++.+ ++||+|++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~--~~fD~i~~ 131 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALN------GIYDIALQKTSLLADVD--GKFDLIVA 131 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT------TCCCCEEEESSTTTTCC--SCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEeccccccCC--CCceEEEE
Confidence 56799999999999999999433458999999999999999987642 12248999999988643 68999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+++|+ ..+++++.++|+||
T Consensus 132 ~~~~~~~-----~~~l~~~~~~L~~g 152 (205)
T 3grz_A 132 NILAEIL-----LDLIPQLDSHLNED 152 (205)
T ss_dssp ESCHHHH-----HHHGGGSGGGEEEE
T ss_pred CCcHHHH-----HHHHHHHHHhcCCC
Confidence 9888774 48899999999986
No 105
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.40 E-value=6e-13 Score=123.35 Aligned_cols=99 Identities=21% Similarity=0.280 Sum_probs=83.3
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
.+..+|||+|||+|.++..|++.. ..+++++|+ +.+++.|++++.... ...+++|+.+|+.+..| ..||+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-----l~~~v~~~~~d~~~~~p--~~~D~v 272 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG-----LADRCEILPGDFFETIP--DGADVY 272 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-----CTTTEEEEECCTTTCCC--SSCSEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC-----cCCceEEeccCCCCCCC--CCceEE
Confidence 356899999999999999999442 237899999 999999999875421 23479999999984333 379999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.+++||++|++..++|++++++|+||
T Consensus 273 ~~~~vlh~~~d~~~~~~L~~~~~~L~pg 300 (369)
T 3gwz_A 273 LIKHVLHDWDDDDVVRILRRIATAMKPD 300 (369)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHTTCCTT
T ss_pred EhhhhhccCCHHHHHHHHHHHHHHcCCC
Confidence 9999999999999889999999999997
No 106
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.39 E-value=4.4e-13 Score=123.50 Aligned_cols=98 Identities=14% Similarity=0.152 Sum_probs=78.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..+++....+|+++|+|+ |++.|++++... ....+++++.+|+++++.+.++||+|+|
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~-----~~~~~i~~~~~d~~~~~~~~~~~D~Ivs 137 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLN-----KLEDTITLIKGKIEEVHLPVEKVDVIIS 137 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHT-----TCTTTEEEEESCTTTSCCSCSCEEEEEE
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHc-----CCCCcEEEEEeeHHHhcCCCCcEEEEEE
Confidence 5779999999999999999944345899999997 999999987542 1124789999999998765579999999
Q ss_pred hhH---HhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWC---IGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~v---l~hltD~el~~~l~~~~~~LkPG 262 (262)
.++ +.|..+ +..++.++.++|+||
T Consensus 138 ~~~~~~l~~~~~--~~~~l~~~~~~Lkpg 164 (340)
T 2fyt_A 138 EWMGYFLLFESM--LDSVLYAKNKYLAKG 164 (340)
T ss_dssp CCCBTTBTTTCH--HHHHHHHHHHHEEEE
T ss_pred cCchhhccCHHH--HHHHHHHHHhhcCCC
Confidence 874 444443 448999999999986
No 107
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.39 E-value=4.2e-13 Score=122.34 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=77.5
Q ss_pred CCCCceeeEeeccccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~-~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
..++.+|||||||+|.++..++.+ .+.+|++||+|+.|++.|+++++... ..+++|+++|+.+++ +++||+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~g------l~~v~~v~gDa~~l~--d~~FDv 191 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLG------VDGVNVITGDETVID--GLEFDV 191 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHT------CCSEEEEESCGGGGG--GCCCSE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcC------CCCeEEEECchhhCC--CCCcCE
Confidence 457899999999999877555434 46799999999999999999986531 257999999999874 478999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++... .++.+ ++++++.+.|+||
T Consensus 192 V~~~a~---~~d~~--~~l~el~r~LkPG 215 (298)
T 3fpf_A 192 LMVAAL---AEPKR--RVFRNIHRYVDTE 215 (298)
T ss_dssp EEECTT---CSCHH--HHHHHHHHHCCTT
T ss_pred EEECCC---ccCHH--HHHHHHHHHcCCC
Confidence 998643 45555 9999999999997
No 108
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.39 E-value=6.7e-13 Score=122.08 Aligned_cols=99 Identities=15% Similarity=0.137 Sum_probs=83.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
.++.+|||||||+|.++..|+... ..+++++|+ +.|++.|++++.... ...+++|+.+|+.+.+++ .+|+|
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~--~~D~v 260 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG-----VADRMRGIAVDIYKESYP--EADAV 260 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT-----CTTTEEEEECCTTTSCCC--CCSEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC-----CCCCEEEEeCccccCCCC--CCCEE
Confidence 356799999999999999999442 238999999 999999999875421 123599999999987543 35999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.+++||++|++...+|++++++|+||
T Consensus 261 ~~~~vlh~~~d~~~~~~l~~~~~~L~pg 288 (359)
T 1x19_A 261 LFCRILYSANEQLSTIMCKKAFDAMRSG 288 (359)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHTTCCTT
T ss_pred EEechhccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999988889999999999997
No 109
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.39 E-value=3.5e-13 Score=121.34 Aligned_cols=105 Identities=14% Similarity=0.110 Sum_probs=80.4
Q ss_pred CceeeEeeccccH----HHHHHHHhcC-----CcEEEEeCCHHHHHHHHhhcccccc----------------cCCCC--
Q 024811 158 HLVALDCGSGIGR----ITKNLLIRYF-----NEVDLLEPVSHFLDAARESLAPENH----------------MAPDM-- 210 (262)
Q Consensus 158 ~~~VLDlGcGtG~----lt~~La~~~~-----~~V~~VD~s~~mld~Ar~~l~~a~~----------------~~~~~-- 210 (262)
+.+|||+|||||. ++..|+.... .+|+++|+|+.||+.|++++-.... .....
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 5799999999998 6666763312 3799999999999999997521100 00000
Q ss_pred -------CcceEEEEcCCCCCCCC-CCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 211 -------HKATNFFCVPLQDFTPE-TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 211 -------~~~v~f~~~d~~~~~~~-~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
..++.|.+.|+.+.+++ .++||+|+|.++++|++++...++++++.+.|+||
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pg 245 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPD 245 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEE
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCC
Confidence 13689999999884322 36899999999999999987779999999999997
No 110
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.39 E-value=3.3e-14 Score=133.20 Aligned_cols=96 Identities=16% Similarity=0.113 Sum_probs=74.9
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|+++-.. .....|...+.++++..+++||+|+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~-~~g~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~~~~~~l~~~~~~fD~I~ 176 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQ-EAGVRHLGFEPSSGVAAKAREKGIR--------VRTDFFEKATADDVRRTEGPANVIY 176 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHH-HTTCEEEEECCCHHHHHHHHTTTCC--------EECSCCSHHHHHHHHHHHCCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHH-HcCCcEEEECCCHHHHHHHHHcCCC--------cceeeechhhHhhcccCCCCEEEEE
Confidence 457799999999999999999 5677999999999999999987110 0111122233333333347899999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.+++|++|+. .+|++++++|+||
T Consensus 177 ~~~vl~h~~d~~--~~l~~~~r~Lkpg 201 (416)
T 4e2x_A 177 AANTLCHIPYVQ--SVLEGVDALLAPD 201 (416)
T ss_dssp EESCGGGCTTHH--HHHHHHHHHEEEE
T ss_pred ECChHHhcCCHH--HHHHHHHHHcCCC
Confidence 999999999877 9999999999996
No 111
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.38 E-value=3.1e-13 Score=113.15 Aligned_cols=101 Identities=11% Similarity=-0.038 Sum_probs=78.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-CCCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-~~~~~yDl 233 (262)
++.+|||+|||+|.++..++.... .+|+++|+|+.|++.|++++.... ...+++++++|+.++. ..+++||+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN-----LIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT-----CGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCCeEEEECCHHHHhhhccCCceE
Confidence 577999999999999999995532 489999999999999999976421 1247999999988874 33478999
Q ss_pred hhhhhHHh------hcCc-hhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIG------HLTD-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~------hltD-~el~~~l~~~~~~LkPG 262 (262)
|+++.++. ++.. .+...+++++.++|+||
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g 132 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG 132 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC
Confidence 99987541 1122 23447999999999986
No 112
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.38 E-value=4.6e-13 Score=123.66 Aligned_cols=100 Identities=15% Similarity=0.110 Sum_probs=80.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..+++....+|++||+| .|++.|++++.... ...+++|+++|+++++.+.++||+|+|
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~fD~Iis 139 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANK-----LDHVVTIIKGKVEEVELPVEKVDIIIS 139 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTT-----CTTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcC-----CCCcEEEEECcHHHccCCCCceEEEEE
Confidence 467999999999999999995434599999999 59999999875421 123589999999998765579999999
Q ss_pred hhHHhhcCc-hhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTD-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD-~el~~~l~~~~~~LkPG 262 (262)
.++.+++.. ..+..++..+.++|+||
T Consensus 140 ~~~~~~l~~~~~~~~~l~~~~r~Lkpg 166 (349)
T 3q7e_A 140 EWMGYCLFYESMLNTVLHARDKWLAPD 166 (349)
T ss_dssp CCCBBTBTBTCCHHHHHHHHHHHEEEE
T ss_pred ccccccccCchhHHHHHHHHHHhCCCC
Confidence 886555533 34448999999999996
No 113
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.37 E-value=9.2e-13 Score=113.78 Aligned_cols=94 Identities=13% Similarity=0.026 Sum_probs=76.7
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCC----CCCCCC
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD----FTPETG 229 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~-~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~----~~~~~~ 229 (262)
..++.+|||+|||+|.++..|+.... .+|++||+|+.|++.|++++.. ..++.++.+|+.+ ..+. +
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE--------RENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT--------CTTEEEEECCTTCGGGGTTTS-C
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc--------CCCeEEEECCCCCcccccccC-c
Confidence 34577999999999999999994433 6899999999999999998642 1578999999988 5554 6
Q ss_pred ccchhhhhhHHhhcCchhH-HHHHHHHHhhccCC
Q 024811 230 RYDVIWVQWCIGHLTDDDF-VSFFKRAKVNHSQT 262 (262)
Q Consensus 230 ~yDlI~s~~vl~hltD~el-~~~l~~~~~~LkPG 262 (262)
+||+|+ +++++++. ..+++++.+.|+||
T Consensus 143 ~~D~v~-----~~~~~~~~~~~~l~~~~~~Lkpg 171 (230)
T 1fbn_A 143 KVDVIY-----EDVAQPNQAEILIKNAKWFLKKG 171 (230)
T ss_dssp CEEEEE-----ECCCSTTHHHHHHHHHHHHEEEE
T ss_pred cEEEEE-----EecCChhHHHHHHHHHHHhCCCC
Confidence 899998 66777632 36899999999986
No 114
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.37 E-value=2.2e-13 Score=118.49 Aligned_cols=94 Identities=13% Similarity=0.121 Sum_probs=76.4
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC---CCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~---~~~yD 232 (262)
++.+|||+|||+|.++..|+... ..+|++||+|+.|++.|++++... ...+++|+++|++++... .++||
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~~fD 143 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL------QLENTTFCHDRAETFGQRKDVRESYD 143 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH------TCSSEEEEESCHHHHTTCTTTTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCEEEEeccHHHhcccccccCCcc
Confidence 46799999999999999999432 458999999999999999987543 123689999999887532 36899
Q ss_pred hhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|+|.. +.+.+ .+++.+.++|+||
T Consensus 144 ~V~~~~----~~~~~--~~l~~~~~~Lkpg 167 (240)
T 1xdz_A 144 IVTARA----VARLS--VLSELCLPLVKKN 167 (240)
T ss_dssp EEEEEC----CSCHH--HHHHHHGGGEEEE
T ss_pred EEEEec----cCCHH--HHHHHHHHhcCCC
Confidence 999976 34444 8999999999986
No 115
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.37 E-value=8.9e-13 Score=121.27 Aligned_cols=99 Identities=16% Similarity=0.183 Sum_probs=82.5
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
.++.+|||+|||+|.++..|+... ..+++++|+ +.|++.|++++... ....+++|+.+|+.+..+ ..||+|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~--~~~D~v 252 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA-----GLADRVTVAEGDFFKPLP--VTADVV 252 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT-----TCTTTEEEEECCTTSCCS--CCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc-----CCCCceEEEeCCCCCcCC--CCCCEE
Confidence 356799999999999999999443 247999999 99999999987542 112379999999976323 359999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++++++||+++++...+|+++.++|+||
T Consensus 253 ~~~~vl~~~~~~~~~~~l~~~~~~L~pg 280 (374)
T 1qzz_A 253 LLSFVLLNWSDEDALTILRGCVRALEPG 280 (374)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999998889999999999986
No 116
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.36 E-value=9.3e-13 Score=122.88 Aligned_cols=100 Identities=19% Similarity=0.186 Sum_probs=81.6
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.++..++.....+|++||+| .|++.|++++... ....+++++++|++++..+ ++||+|+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~-~~~D~Iv 134 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKAN-----NLDHIVEVIEGSVEDISLP-EKVDVII 134 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHT-----TCTTTEEEEESCGGGCCCS-SCEEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHc-----CCCCeEEEEECchhhcCcC-CcceEEE
Confidence 3578999999999999999994434499999999 9999999987542 1224589999999998765 7999999
Q ss_pred hhhHHhhcCch-hHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDD-DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~-el~~~l~~~~~~LkPG 262 (262)
|.++.+++..+ .+..+++.+.++|+||
T Consensus 135 ~~~~~~~l~~e~~~~~~l~~~~~~Lkpg 162 (376)
T 3r0q_C 135 SEWMGYFLLRESMFDSVISARDRWLKPT 162 (376)
T ss_dssp ECCCBTTBTTTCTHHHHHHHHHHHEEEE
T ss_pred EcChhhcccchHHHHHHHHHHHhhCCCC
Confidence 98766666543 3558999999999996
No 117
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.35 E-value=4.3e-13 Score=118.01 Aligned_cols=100 Identities=17% Similarity=0.056 Sum_probs=77.8
Q ss_pred CCceeeEeeccccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--CCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~--~~~~yDl 233 (262)
++.+|||+|||+|.++..++ +.+. +|++||+++.+++.|++++.... ...+++++++|+.++.. ..++||+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la-~~~~~~v~gvDi~~~~~~~a~~n~~~~~-----~~~~v~~~~~D~~~~~~~~~~~~fD~ 122 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLS-TRTKAKIVGVEIQERLADMAKRSVAYNQ-----LEDQIEIIEYDLKKITDLIPKERADI 122 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHH-TTCCCEEEEECCSHHHHHHHHHHHHHTT-----CTTTEEEECSCGGGGGGTSCTTCEEE
T ss_pred CCCEEEEcCCchhHHHHHHH-HhcCCcEEEEECCHHHHHHHHHHHHHCC-----CcccEEEEECcHHHhhhhhccCCccE
Confidence 47899999999999999999 4444 89999999999999999986421 12368999999998753 2478999
Q ss_pred hhhhhHHhhc------------------CchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHL------------------TDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hl------------------tD~el~~~l~~~~~~LkPG 262 (262)
|+++.++++. ....+..+++.+.++|+||
T Consensus 123 Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg 169 (259)
T 3lpm_A 123 VTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQG 169 (259)
T ss_dssp EEECCCC-----------------------HHHHHHHHHHHHHEEEE
T ss_pred EEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCC
Confidence 9998654332 1234558999999999986
No 118
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.35 E-value=1.4e-12 Score=125.92 Aligned_cols=99 Identities=12% Similarity=0.107 Sum_probs=83.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..+++....+|+++|+|+ |++.|++++... ....+++|+.+|+.+++.+ ++||+|+|
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~-----gl~~~v~~~~~d~~~~~~~-~~fD~Ivs 230 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN-----NLTDRIVVIPGKVEEVSLP-EQVDIIIS 230 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHT-----TCTTTEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHc-----CCCCcEEEEECchhhCccC-CCeEEEEE
Confidence 4679999999999999999943345899999999 999999987542 1224799999999987654 68999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++++|+.+++...++..+++.|+||
T Consensus 231 ~~~~~~~~~e~~~~~l~~~~~~Lkpg 256 (480)
T 3b3j_A 231 EPMGYMLFNERMLESYLHAKKYLKPS 256 (480)
T ss_dssp CCCHHHHTCHHHHHHHHHGGGGEEEE
T ss_pred eCchHhcCcHHHHHHHHHHHHhcCCC
Confidence 99999999888778888999999986
No 119
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.35 E-value=1.3e-12 Score=114.00 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=79.0
Q ss_pred CCceeeEeeccccHHHHHHHHh--c-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcc--------------------
Q 024811 157 QHLVALDCGSGIGRITKNLLIR--Y-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA-------------------- 213 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~--~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~-------------------- 213 (262)
++.+|||+|||+|.++..++.. . ..+|+++|+|+.|++.|++++...... .....
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPA--GLTARELERREQSERFGKPSYLEAA 128 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHH--HHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhc--cccccchhhhhhhhhcccccchhhh
Confidence 4679999999999999999954 1 457999999999999999887532000 00001
Q ss_pred -----eE-------------EEEcCCCCCCC-----CCCccchhhhhhHHhhcCc-------hhHHHHHHHHHhhccCC
Q 024811 214 -----TN-------------FFCVPLQDFTP-----ETGRYDVIWVQWCIGHLTD-------DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 214 -----v~-------------f~~~d~~~~~~-----~~~~yDlI~s~~vl~hltD-------~el~~~l~~~~~~LkPG 262 (262)
++ |+++|+.+..+ ...+||+|+|+.++++..+ .....+++++.++|+||
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 129 QAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 56 99999988642 2248999999988777765 44568999999999997
No 120
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.35 E-value=1.3e-12 Score=112.38 Aligned_cols=95 Identities=9% Similarity=-0.015 Sum_probs=70.3
Q ss_pred CCCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC---CCCCCc
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPETGR 230 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~---~~~~~~ 230 (262)
..++.+|||+|||+|.++..|+... ..+|+++|+|+.|++.+.+.... ..++.++.+|+.+. .+..++
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~~~ 126 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE--------RNNIIPLLFDASKPWKYSGIVEK 126 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH--------CSSEEEECSCTTCGGGTTTTCCC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc--------CCCeEEEEcCCCCchhhcccccc
Confidence 3457899999999999999999443 25799999999988766654322 13678888888774 222368
Q ss_pred cchhhhhhHHhhcCch-hHHHHHHHHHhhccCC
Q 024811 231 YDVIWVQWCIGHLTDD-DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 231 yDlI~s~~vl~hltD~-el~~~l~~~~~~LkPG 262 (262)
||+|+++. .++ +...+++++.++||||
T Consensus 127 fD~V~~~~-----~~~~~~~~~l~~~~r~Lkpg 154 (210)
T 1nt2_A 127 VDLIYQDI-----AQKNQIEILKANAEFFLKEK 154 (210)
T ss_dssp EEEEEECC-----CSTTHHHHHHHHHHHHEEEE
T ss_pred eeEEEEec-----cChhHHHHHHHHHHHHhCCC
Confidence 99999972 222 2335799999999996
No 121
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.34 E-value=5.4e-13 Score=114.34 Aligned_cols=90 Identities=17% Similarity=0.074 Sum_probs=75.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.++..|+ ..+.+|+++|+|+.+++.|++++... . +++++++|+.+..+..++||+|+
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~-~~~~~v~~vD~~~~~~~~a~~~~~~~-------~-~v~~~~~d~~~~~~~~~~fD~v~ 139 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIA-EIVDKVVSVEINEKMYNYASKLLSYY-------N-NIKLILGDGTLGYEEEKPYDRVV 139 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHH-HHSSEEEEEESCHHHHHHHHHHHTTC-------S-SEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHH-HHcCEEEEEeCCHHHHHHHHHHHhhc-------C-CeEEEECCcccccccCCCccEEE
Confidence 357799999999999999999 55689999999999999999987532 2 78999999987333346899999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+..+++|+.+ ++.+.|+||
T Consensus 140 ~~~~~~~~~~--------~~~~~L~pg 158 (231)
T 1vbf_A 140 VWATAPTLLC--------KPYEQLKEG 158 (231)
T ss_dssp ESSBBSSCCH--------HHHHTEEEE
T ss_pred ECCcHHHHHH--------HHHHHcCCC
Confidence 9999999874 477788875
No 122
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.34 E-value=7.4e-13 Score=113.66 Aligned_cols=100 Identities=10% Similarity=0.174 Sum_probs=76.6
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC--CCCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~--~~~~~yDl 233 (262)
++.+|||||||+|.++..|+... ..+|++||+|+.|++.|++++... ...++.|+++|+.++. .++++||.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~------~~~nv~~~~~d~~~l~~~~~~~~~d~ 111 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS------EAQNVKLLNIDADTLTDVFEPGEVKR 111 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS------CCSSEEEECCCGGGHHHHCCTTSCCE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc------CCCCEEEEeCCHHHHHhhcCcCCcCE
Confidence 35689999999999999999543 457999999999999999987542 2357999999998753 33468999
Q ss_pred hhhhhHHhhcCch------hHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDD------DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~------el~~~l~~~~~~LkPG 262 (262)
|+++++..|.... ....+++++.++|+||
T Consensus 112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lkpg 146 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG 146 (213)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS
T ss_pred EEEECCCCCcCccccccccCcHHHHHHHHHHcCCC
Confidence 9887543322211 0237999999999997
No 123
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.34 E-value=2.4e-13 Score=117.77 Aligned_cols=99 Identities=14% Similarity=0.054 Sum_probs=76.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC-C--CCCCcc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T--PETGRY 231 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~--~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~-~--~~~~~y 231 (262)
...+|||||||+|.++..++ +.++ +|++||+|+.|++.|++++... ...++.|+++|+.++ + .++++|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA-~~~p~~~v~giD~s~~~l~~a~~~~~~~------~l~nv~~~~~Da~~~l~~~~~~~~~ 106 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMA-KDRPEQDFLGIEVHSPGVGACLASAHEE------GLSNLRVMCHDAVEVLHKMIPDNSL 106 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHH-HHCTTSEEEEECSCHHHHHHHHHHHHHT------TCSSEEEECSCHHHHHHHHSCTTCE
T ss_pred CCCeEEEEeeeChHHHHHHH-HHCCCCeEEEEEecHHHHHHHHHHHHHh------CCCcEEEEECCHHHHHHHHcCCCCh
Confidence 35689999999999999999 4443 5999999999999999987542 235799999998774 1 234799
Q ss_pred chhhhhhHHhhcCchhH------HHHHHHHHhhccCC
Q 024811 232 DVIWVQWCIGHLTDDDF------VSFFKRAKVNHSQT 262 (262)
Q Consensus 232 DlI~s~~vl~hltD~el------~~~l~~~~~~LkPG 262 (262)
|.|+++++..+...... ..+++.+.++|+||
T Consensus 107 d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpG 143 (218)
T 3dxy_A 107 RMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLG 143 (218)
T ss_dssp EEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEE
T ss_pred heEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCC
Confidence 99999865433322211 15999999999997
No 124
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.34 E-value=3.7e-13 Score=115.77 Aligned_cols=95 Identities=12% Similarity=0.027 Sum_probs=74.3
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
+..+|||+|||+|-++..++ .. ..+|.++|.|+.|++.++++++... ...++++ .|..+..+ +++||+|
T Consensus 49 ~~~~VLDlGCG~GplAl~l~-~~~p~a~~~A~Di~~~~leiar~~~~~~g-----~~~~v~~--~d~~~~~~-~~~~DvV 119 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQW-NENEKIIYHAYDIDRAEIAFLSSIIGKLK-----TTIKYRF--LNKESDVY-KGTYDVV 119 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHH-CSSCCCEEEEECSCHHHHHHHHHHHHHSC-----CSSEEEE--ECCHHHHT-TSEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHH-hcCCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCccEEE--ecccccCC-CCCcChh
Confidence 57899999999999999997 43 3489999999999999999986531 1114555 66655434 4789999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++..++||+.+.+ ..+.++.+.|+||
T Consensus 120 La~k~LHlL~~~~--~al~~v~~~L~pg 145 (200)
T 3fzg_A 120 FLLKMLPVLKQQD--VNILDFLQLFHTQ 145 (200)
T ss_dssp EEETCHHHHHHTT--CCHHHHHHTCEEE
T ss_pred hHhhHHHhhhhhH--HHHHHHHHHhCCC
Confidence 9999999994444 5666899999986
No 125
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.34 E-value=4.4e-13 Score=114.04 Aligned_cols=97 Identities=14% Similarity=0.090 Sum_probs=75.1
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC-CCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~-~~~~~~yDlI~ 235 (262)
++.+|||+|||+|.++..++.+...+|+++|.|+.|++.|++++... ...+++|+++|+.++ +...++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~------~~~~v~~~~~D~~~~~~~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL------KAGNARVVNSNAMSFLAQKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT------TCCSEEEECSCHHHHHSSCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEECCHHHHHhhcCCCCCEEE
Confidence 36799999999999999988555568999999999999999998642 124789999998774 32346899999
Q ss_pred hhhHHhhcCchhHHHHHHHHHh--hccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKV--NHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~--~LkPG 262 (262)
++.+++ ..+.+ .+++.+.+ +|+||
T Consensus 128 ~~~p~~-~~~~~--~~l~~l~~~~~L~pg 153 (202)
T 2fpo_A 128 VDPPFR-RGLLE--ETINLLEDNGWLADE 153 (202)
T ss_dssp ECCSSS-TTTHH--HHHHHHHHTTCEEEE
T ss_pred ECCCCC-CCcHH--HHHHHHHhcCccCCC
Confidence 987743 33333 67777765 48885
No 126
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.33 E-value=1e-12 Score=119.20 Aligned_cols=96 Identities=17% Similarity=0.185 Sum_probs=81.6
Q ss_pred ceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhh
Q 024811 159 LVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~ 237 (262)
.+|||+|||+|.++..++... ..+++++|+ +.+++.|++++.... ...+++|+.+|+.+. .+ +.||+|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~-~~-~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL-----AGERVSLVGGDMLQE-VP-SNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH-----HTTSEEEEESCTTTC-CC-SSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC-----CCCcEEEecCCCCCC-CC-CCCCEEEEc
Confidence 799999999999999999443 347999999 999999999875321 123689999999873 33 579999999
Q ss_pred hHHhhcCchhHHHHHHHHHhhccCC
Q 024811 238 WCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 238 ~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++||+++++...++++++++|+||
T Consensus 241 ~vl~~~~~~~~~~~l~~~~~~L~pg 265 (334)
T 2ip2_A 241 RIIGDLDEAASLRLLGNCREAMAGD 265 (334)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHSCTT
T ss_pred hhccCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999889999999999997
No 127
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.33 E-value=1.1e-12 Score=116.44 Aligned_cols=99 Identities=14% Similarity=0.086 Sum_probs=77.3
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++... ...+++|+++|+.+..+ .++||+|+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~------~~~~v~~~~~d~~~~~~-~~~fD~Iv 181 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL------AIKNIHILQSDWFSALA-GQQFAMIV 181 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH------TCCSEEEECCSTTGGGT-TCCEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEEcchhhhcc-cCCccEEE
Confidence 46799999999999999999443 458999999999999999997542 12368999999987543 36899999
Q ss_pred hhhH-------------HhhcCc----------hhHHHHHHHHHhhccCC
Q 024811 236 VQWC-------------IGHLTD----------DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~v-------------l~hltD----------~el~~~l~~~~~~LkPG 262 (262)
++.+ ++|-+. .....+++.+.+.|+||
T Consensus 182 ~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkpg 231 (276)
T 2b3t_A 182 SNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSG 231 (276)
T ss_dssp ECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEE
T ss_pred ECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCC
Confidence 9843 333332 23457999999999986
No 128
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.33 E-value=6.4e-13 Score=109.57 Aligned_cols=98 Identities=14% Similarity=0.071 Sum_probs=75.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC----CCCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~----~~~~yD 232 (262)
++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++.... ...+++|+++|+.++.+ ..++||
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITK-----EPEKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHT-----CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhC-----CCcceEEEECcHHHHHHHHHhcCCCCC
Confidence 467999999999999999985444689999999999999999875431 12468999999987532 136899
Q ss_pred hhhhhhHHhhcCchhHHHHHHHH--HhhccCC
Q 024811 233 VIWVQWCIGHLTDDDFVSFFKRA--KVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el~~~l~~~--~~~LkPG 262 (262)
+|+++.+++ ..+.+ .+++.+ .++|+||
T Consensus 119 ~i~~~~~~~-~~~~~--~~~~~l~~~~~L~~g 147 (187)
T 2fhp_A 119 LVLLDPPYA-KQEIV--SQLEKMLERQLLTNE 147 (187)
T ss_dssp EEEECCCGG-GCCHH--HHHHHHHHTTCEEEE
T ss_pred EEEECCCCC-chhHH--HHHHHHHHhcccCCC
Confidence 999998754 33333 556666 7888886
No 129
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.33 E-value=1.5e-12 Score=119.11 Aligned_cols=100 Identities=14% Similarity=0.134 Sum_probs=79.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..+++....+|+++|+| .|++.|++++... ....+++++.+|+++++.+.++||+|+|
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~-----~~~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELN-----GFSDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHT-----TCTTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHc-----CCCCCEEEEECchhhccCCCCcccEEEE
Confidence 467999999999999999994434589999999 6999999987542 1224689999999998665578999999
Q ss_pred hhHHhhcCc-hhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTD-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD-~el~~~l~~~~~~LkPG 262 (262)
.++.+++.. ..+..++..+.++|+||
T Consensus 112 ~~~~~~l~~~~~~~~~l~~~~~~Lkpg 138 (328)
T 1g6q_1 112 EWMGYFLLYESMMDTVLYARDHYLVEG 138 (328)
T ss_dssp CCCBTTBSTTCCHHHHHHHHHHHEEEE
T ss_pred eCchhhcccHHHHHHHHHHHHhhcCCC
Confidence 876555543 33458999999999986
No 130
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.33 E-value=1.5e-12 Score=109.62 Aligned_cols=92 Identities=13% Similarity=0.074 Sum_probs=75.5
Q ss_pred CceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 158 HLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
+.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++... ...+++++++|+.++.+. ++||+|++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~-~~~D~i~~ 138 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL------KLENIEPVQSRVEEFPSE-PPFDGVIS 138 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT------TCSSEEEEECCTTTSCCC-SCEEEEEC
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCeEEEecchhhCCcc-CCcCEEEE
Confidence 6799999999999999999443 458999999999999999987542 223589999999988643 68999998
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+. +.+. ..+++.+.+.|+||
T Consensus 139 ~~----~~~~--~~~l~~~~~~L~~g 158 (207)
T 1jsx_A 139 RA----FASL--NDMVSWCHHLPGEQ 158 (207)
T ss_dssp SC----SSSH--HHHHHHHTTSEEEE
T ss_pred ec----cCCH--HHHHHHHHHhcCCC
Confidence 64 2333 38999999999986
No 131
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.33 E-value=1.1e-12 Score=110.27 Aligned_cols=89 Identities=16% Similarity=0.264 Sum_probs=69.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++. +++++++|+.+++ ++||+|++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~---~~~D~v~~ 116 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----------GVNFMVADVSEIS---GKYDTWIM 116 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCGGGCC---CCEEEEEE
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----------CCEEEECcHHHCC---CCeeEEEE
Confidence 467999999999999999994434479999999999999999863 5789999998863 58999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhc
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNH 259 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~L 259 (262)
+.+++|+.+.....+++++.+.|
T Consensus 117 ~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 117 NPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CCCC-------CHHHHHHHHHHE
T ss_pred CCCchhccCchhHHHHHHHHHhc
Confidence 99999998644346888887765
No 132
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.32 E-value=2.8e-13 Score=110.02 Aligned_cols=94 Identities=16% Similarity=0.107 Sum_probs=73.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC----CCCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~----~~~~yD 232 (262)
++.+|||+|||+|.++..++ +.+.+|+++|+|+.|++.|++++... .. +++++++|+.++.+ ..++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~-~~~~~v~~vD~~~~~~~~a~~~~~~~------~~-~~~~~~~d~~~~~~~~~~~~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAA-SEGWEAVLVEKDPEAVRLLKENVRRT------GL-GARVVALPVEVFLPEAKAQGERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHH------TC-CCEEECSCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHHc------CC-ceEEEeccHHHHHHhhhccCCceE
Confidence 46799999999999999999 55667999999999999999987642 11 68899999877422 123799
Q ss_pred hhhhhhHHhhcCchhHHHHHHHHH--hhccCC
Q 024811 233 VIWVQWCIGHLTDDDFVSFFKRAK--VNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el~~~l~~~~--~~LkPG 262 (262)
+|+++.+++ .+.+ .+++.+. ++|+||
T Consensus 113 ~i~~~~~~~--~~~~--~~~~~~~~~~~L~~g 140 (171)
T 1ws6_A 113 VAFMAPPYA--MDLA--ALFGELLASGLVEAG 140 (171)
T ss_dssp EEEECCCTT--SCTT--HHHHHHHHHTCEEEE
T ss_pred EEEECCCCc--hhHH--HHHHHHHhhcccCCC
Confidence 999998765 4433 5666666 899885
No 133
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=9.9e-13 Score=111.51 Aligned_cols=93 Identities=12% Similarity=-0.004 Sum_probs=75.1
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.++.+|||+|||+|.++..++...+ .+|+++|+|+.+++.|++++... ...++.++.+|+....+..++||+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~fD~ 149 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL------GYDNVIVIVGDGTLGYEPLAPYDR 149 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH------TCTTEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCeEEEECCcccCCCCCCCeeE
Confidence 3577999999999999999995543 68999999999999999987542 123689999998654333468999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+++.+++|+.+ ++.+.|+||
T Consensus 150 v~~~~~~~~~~~--------~~~~~L~pg 170 (215)
T 2yxe_A 150 IYTTAAGPKIPE--------PLIRQLKDG 170 (215)
T ss_dssp EEESSBBSSCCH--------HHHHTEEEE
T ss_pred EEECCchHHHHH--------HHHHHcCCC
Confidence 999999999873 577888875
No 134
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.32 E-value=2.2e-12 Score=118.20 Aligned_cols=99 Identities=20% Similarity=0.245 Sum_probs=81.5
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
.++.+|||+|||+|.++..|+... ..+++++|+ +.|++.|++++.... ...+++|+.+|+.+..+ ..||+|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~--~~~D~v 253 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG-----LSDRVDVVEGDFFEPLP--RKADAI 253 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT-----CTTTEEEEECCTTSCCS--SCEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC-----CCCceEEEeCCCCCCCC--CCccEE
Confidence 356799999999999999999443 236788898 999999999875421 12378999999976333 359999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+++.++||+++++...+|+++.++|+||
T Consensus 254 ~~~~vl~~~~~~~~~~~l~~~~~~L~pg 281 (360)
T 1tw3_A 254 ILSFVLLNWPDHDAVRILTRCAEALEPG 281 (360)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEE
T ss_pred EEcccccCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999998889999999999986
No 135
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.32 E-value=3e-12 Score=113.28 Aligned_cols=104 Identities=15% Similarity=0.147 Sum_probs=77.1
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-------CCC
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------PET 228 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-------~~~ 228 (262)
++.+|||+|||+|.++..|+.+. ..+|++||+++.|++.|++++.....+ ....+++++++|+.++. ...
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~--~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNA--AFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGT--TTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhC--CCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 46799999999999999999443 358999999999999999997530000 11235899999999872 234
Q ss_pred CccchhhhhhHHh----------------hcCchhHHHHHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIG----------------HLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~----------------hltD~el~~~l~~~~~~LkPG 262 (262)
++||+|+++.++. |.....+..+++.+.++|+||
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg 163 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSG 163 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCC
Confidence 6899999984432 223334668999999999986
No 136
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.32 E-value=1.3e-12 Score=107.32 Aligned_cols=96 Identities=16% Similarity=0.150 Sum_probs=77.1
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.++..++ +.+.+|+++|+|+.+++.|++++.... ...++.++++|+.+..+..++||+|+
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~-~~~~~v~~~D~~~~~~~~a~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~D~v~ 105 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELA-GRVRRVYAIDRNPEAISTTEMNLQRHG-----LGDNVTLMEGDAPEALCKIPDIDIAV 105 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHH-TTSSEEEEEESCHHHHHHHHHHHHHTT-----CCTTEEEEESCHHHHHTTSCCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHH-HhcCEEEEEECCHHHHHHHHHHHHHcC-----CCcceEEEecCHHHhcccCCCCCEEE
Confidence 357799999999999999999 555899999999999999999875421 11478999999876322225899999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+..+++|+ ..+++++.++|+||
T Consensus 106 ~~~~~~~~-----~~~l~~~~~~l~~g 127 (192)
T 1l3i_A 106 VGGSGGEL-----QEILRIIKDKLKPG 127 (192)
T ss_dssp ESCCTTCH-----HHHHHHHHHTEEEE
T ss_pred ECCchHHH-----HHHHHHHHHhcCCC
Confidence 98776543 48999999999986
No 137
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.31 E-value=1.1e-12 Score=108.71 Aligned_cols=87 Identities=20% Similarity=0.064 Sum_probs=71.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+ +|+++|+|+.|++. . .+++++++|+.+..+ +++||+|++
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~-~~~-~v~gvD~s~~~~~~-----~----------~~~~~~~~d~~~~~~-~~~fD~i~~ 84 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLR-KRN-TVVSTDLNIRALES-----H----------RGGNLVRADLLCSIN-QESVDVVVF 84 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHT-TTS-EEEEEESCHHHHHT-----C----------SSSCEEECSTTTTBC-GGGCSEEEE
T ss_pred CCCeEEEeccCccHHHHHHH-hcC-cEEEEECCHHHHhc-----c----------cCCeEEECChhhhcc-cCCCCEEEE
Confidence 46699999999999999999 556 99999999999988 1 257899999988533 379999999
Q ss_pred hhHHhhcCch-------hHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDD-------DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~-------el~~~l~~~~~~LkPG 262 (262)
+.++++.++. +...+++++.+.| ||
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pg 116 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TV 116 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CS
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CC
Confidence 9998877665 3347888888877 64
No 138
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.31 E-value=7.7e-13 Score=120.19 Aligned_cols=93 Identities=19% Similarity=0.203 Sum_probs=76.0
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCc---EEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCcc
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNE---VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~---V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~y 231 (262)
..++.+|||+|||+|.++..++ +.+.. |+++|+|+.+++.|++++... ...+++++.+|+.+..+..++|
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la-~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------g~~~v~~~~~d~~~~~~~~~~f 145 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMS-RVVGEKGLVVSVEYSRKICEIAKRNVERL------GIENVIFVCGDGYYGVPEFSPY 145 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHH-HHHCTTCEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCGGGCCGGGCCE
T ss_pred CCCcCEEEEecCCchHHHHHHH-HhcCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCeEEEECChhhccccCCCe
Confidence 3457899999999999999999 44444 999999999999999987542 2245899999998865444789
Q ss_pred chhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 232 DVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 232 DlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+|++..+++|+. +.+.+.|+||
T Consensus 146 D~Iv~~~~~~~~~--------~~~~~~Lkpg 168 (317)
T 1dl5_A 146 DVIFVTVGVDEVP--------ETWFTQLKEG 168 (317)
T ss_dssp EEEEECSBBSCCC--------HHHHHHEEEE
T ss_pred EEEEEcCCHHHHH--------HHHHHhcCCC
Confidence 9999999999987 3567788885
No 139
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.30 E-value=1.5e-12 Score=111.69 Aligned_cols=98 Identities=10% Similarity=0.109 Sum_probs=76.7
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC------C
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------T 228 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------~ 228 (262)
++.+|||+|||+|..+..++... ..+|++||+|+.|++.|++++.... ...+++++++|+.++.+. .
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~l~~~~~~~~~ 132 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG-----LQDKVTILNGASQDLIPQLKKKYDV 132 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-----CGGGEEEEESCHHHHGGGTTTTSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC-----CCCceEEEECCHHHHHHHHHHhcCC
Confidence 46799999999999999999432 4589999999999999999986531 123699999997553211 1
Q ss_pred CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++||+|++....++..+.. .++..+ ++|+||
T Consensus 133 ~~fD~V~~d~~~~~~~~~~--~~~~~~-~~Lkpg 163 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYLPDT--LLLEKC-GLLRKG 163 (221)
T ss_dssp CCCSEEEECSCGGGHHHHH--HHHHHT-TCCCTT
T ss_pred CceEEEEEcCCcccchHHH--HHHHhc-cccCCC
Confidence 5899999988777765544 788888 999997
No 140
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.30 E-value=1.3e-12 Score=114.47 Aligned_cols=106 Identities=9% Similarity=0.017 Sum_probs=74.7
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCC-CC--CCCCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT--PETGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~-~~--~~~~~yD 232 (262)
+..+|||||||+|.++..|+... ...|++||+|+.|++.|++++...+........+++|+++|+.+ ++ ...++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 46789999999999999999432 34799999999999999987643111001123579999999987 33 3357899
Q ss_pred hhhhhhHHhhcCch------hHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDD------DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~------el~~~l~~~~~~LkPG 262 (262)
.|+++++-.|.... ....+|+++.++|+||
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpG 161 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVG 161 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEE
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCC
Confidence 99876543222110 0126999999999996
No 141
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.30 E-value=2.6e-12 Score=117.86 Aligned_cols=95 Identities=18% Similarity=0.181 Sum_probs=74.4
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~--~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.+..+|||||||+|.++..|+ +.++ +++++|+ +.++. ++++... ....+++|+.+|+.+..| +||+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~--~~~~~~~-----~~~~~v~~~~~d~~~~~p---~~D~ 250 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVL-REHPGLQGVLLDR-AEVVA--RHRLDAP-----DVAGRWKVVEGDFLREVP---HADV 250 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHH-HHCTTEEEEEEEC-HHHHT--TCCCCCG-----GGTTSEEEEECCTTTCCC---CCSE
T ss_pred cCCceEEEECCccCHHHHHHH-HHCCCCEEEEecC-HHHhh--ccccccc-----CCCCCeEEEecCCCCCCC---CCcE
Confidence 457899999999999999999 4444 5788898 45554 3333221 123469999999973322 8999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++++++||++|++...+|++++++|+||
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~Lkpg 279 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMPAH 279 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCCTT
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999998889999999999997
No 142
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.30 E-value=1.7e-12 Score=119.10 Aligned_cols=89 Identities=13% Similarity=0.225 Sum_probs=75.8
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
+..+|||||||+|.++..|+... ..+++++|+ +.|++.|++. .+++|+.+|+.+ +.+ .||+|+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~-~~p--~~D~v~ 251 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS------------NNLTYVGGDMFT-SIP--NADAVL 251 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB------------TTEEEEECCTTT-CCC--CCSEEE
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC------------CCcEEEeccccC-CCC--CccEEE
Confidence 46799999999999999999443 337999999 9999877652 258999999976 332 399999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQ 261 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkP 261 (262)
+++++||++|++...+|++++++|+|
T Consensus 252 ~~~~lh~~~d~~~~~~l~~~~~~L~p 277 (352)
T 1fp2_A 252 LKYILHNWTDKDCLRILKKCKEAVTN 277 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHSG
T ss_pred eehhhccCCHHHHHHHHHHHHHhCCC
Confidence 99999999999988999999999999
No 143
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.30 E-value=5.3e-13 Score=109.85 Aligned_cols=98 Identities=13% Similarity=0.115 Sum_probs=74.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-CCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-~~~~~yDlI~ 235 (262)
++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++... ....++.++++|+.++. ...++||+|+
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~fD~i~ 105 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMT-----KAENRFTLLKMEAERAIDCLTGRFDLVF 105 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTT-----TCGGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCceEEEECcHHHhHHhhcCCCCEEE
Confidence 46799999999999999999543468999999999999999988542 11236899999988742 2235799999
Q ss_pred hhhHHhhcCchhHHHHHHHHH--hhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAK--VNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~--~~LkPG 262 (262)
++.++++ .+ ...+++.+. ++|+||
T Consensus 106 ~~~~~~~-~~--~~~~~~~l~~~~~L~~g 131 (177)
T 2esr_A 106 LDPPYAK-ET--IVATIEALAAKNLLSEQ 131 (177)
T ss_dssp ECCSSHH-HH--HHHHHHHHHHTTCEEEE
T ss_pred ECCCCCc-ch--HHHHHHHHHhCCCcCCC
Confidence 9876543 22 225666666 888886
No 144
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.29 E-value=5.6e-12 Score=116.44 Aligned_cols=97 Identities=10% Similarity=0.152 Sum_probs=80.9
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCc--EEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~--V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
....+|||||||+|.++..|+ +.+++ +++.|. |.+++.|++++... ...+++|+.+|+.+.++ ..+|+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~-~~~p~~~~~~~dl-p~v~~~a~~~~~~~------~~~rv~~~~gD~~~~~~--~~~D~ 247 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECM-SLYPGCKITVFDI-PEVVWTAKQHFSFQ------EEEQIDFQEGDFFKDPL--PEADL 247 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHH-HHCSSCEEEEEEC-HHHHHHHHHHSCC--------CCSEEEEESCTTTSCC--CCCSE
T ss_pred ccCCeEEeeCCCCCHHHHHHH-HhCCCceeEeccC-HHHHHHHHHhhhhc------ccCceeeecCccccCCC--CCceE
Confidence 345689999999999999999 55654 556676 88999999987542 23589999999976533 36899
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++.++||+++|++..++|++++++|+||
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~pg 276 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKPG 276 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCTT
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCCC
Confidence 99999999999999999999999999997
No 145
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.29 E-value=2.3e-12 Score=112.06 Aligned_cols=98 Identities=15% Similarity=0.121 Sum_probs=70.7
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCC-HHHHHHH---HhhcccccccCCCCCcceEEEEcCCCCCCCC-CCc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPV-SHFLDAA---RESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGR 230 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s-~~mld~A---r~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~-~~~ 230 (262)
++.+|||||||+|.++..|+... ..+|++||+| +.|++.| ++++... ...++.|+++|+++++.. .+.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~------~~~~v~~~~~d~~~l~~~~~d~ 97 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG------GLSNVVFVIAAAESLPFELKNI 97 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT------CCSSEEEECCBTTBCCGGGTTC
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc------CCCCeEEEEcCHHHhhhhccCe
Confidence 47799999999999999999432 4479999999 8888887 7665432 235789999999988421 134
Q ss_pred cchhhhhhHH----hh-cCchhHHHHHHHHHhhccCC
Q 024811 231 YDVIWVQWCI----GH-LTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 231 yDlI~s~~vl----~h-ltD~el~~~l~~~~~~LkPG 262 (262)
+|.|++++.. +| ..+.. .+|++++++||||
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~--~~l~~~~r~LkpG 132 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNR--DILSNVADLAKKE 132 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCH--HHHHHHHTTEEEE
T ss_pred EEEEEEeCCCcHHhhhhhcchH--HHHHHHHHhcCCC
Confidence 5555555432 12 22333 7899999999997
No 146
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.28 E-value=4.7e-12 Score=103.41 Aligned_cols=88 Identities=13% Similarity=0.168 Sum_probs=72.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++ +...+|+++|+|+.|++.|++++... ...++.++++|+.+. .+.++||+|++
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~-~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~~~~~d~~~~-~~~~~~D~i~~ 106 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIA-KRCKFVYAIDYLDGAIEVTKQNLAKF------NIKNCQIIKGRAEDV-LDKLEFNKAFI 106 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHH-TTSSEEEEEECSHHHHHHHHHHHHHT------TCCSEEEEESCHHHH-GGGCCCSEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHH-hcCCeEEEEeCCHHHHHHHHHHHHHc------CCCcEEEEECCcccc-ccCCCCcEEEE
Confidence 56799999999999999999 56779999999999999999997542 124689999999873 33368999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhh
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVN 258 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~ 258 (262)
+.+ .+ ...+++.+.+.
T Consensus 107 ~~~----~~--~~~~l~~~~~~ 122 (183)
T 2yxd_A 107 GGT----KN--IEKIIEILDKK 122 (183)
T ss_dssp CSC----SC--HHHHHHHHHHT
T ss_pred CCc----cc--HHHHHHHHhhC
Confidence 987 33 34888888887
No 147
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.28 E-value=8.4e-13 Score=118.11 Aligned_cols=98 Identities=12% Similarity=0.001 Sum_probs=70.1
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEE--EcCCCCCCCCCCccc
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~--~~d~~~~~~~~~~yD 232 (262)
..++.+|||+|||||.++..++ +. .+|++||+|+ |+..++++.... .....++.|+ ++|+.+++ +++||
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la-~~-~~V~gvD~s~-m~~~a~~~~~~~----~~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAA-SR-PHVMDVRAYT-LGVGGHEVPRIT----ESYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHH-TS-TTEEEEEEEC-CCCSSCCCCCCC----CBTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHH-Hc-CcEEEEECch-hhhhhhhhhhhh----hccCCCeEEEecccCHhHCC--CCCCc
Confidence 3457899999999999999999 55 7899999999 643333221000 0111268899 99999885 36899
Q ss_pred hhhhhhHHhhcCchh-----HHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDD-----FVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~e-----l~~~l~~~~~~LkPG 262 (262)
+|+|..+ ++..++. ...+|..+.++|+||
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpG 176 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKN 176 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccC
Confidence 9999877 5544432 123789999999997
No 148
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.28 E-value=4e-12 Score=113.65 Aligned_cols=94 Identities=14% Similarity=0.150 Sum_probs=75.9
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++.....+|+++|.|+.|++.|++++.... ...+++|+++|+.++.+ .++||+|++
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~-----~~~~v~~~~~D~~~~~~-~~~fD~Vi~ 198 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNK-----VEDRMSAYNMDNRDFPG-ENIADRILM 198 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTT-----CTTTEEEECSCTTTCCC-CSCEEEEEE
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEEECCHHHhcc-cCCccEEEE
Confidence 477999999999999999994433469999999999999999876421 12358999999999876 479999998
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+ .+.. .++.++.++|+||
T Consensus 199 ~~p----~~~~--~~l~~~~~~Lkpg 218 (278)
T 2frn_A 199 GYV----VRTH--EFIPKALSIAKDG 218 (278)
T ss_dssp CCC----SSGG--GGHHHHHHHEEEE
T ss_pred CCc----hhHH--HHHHHHHHHCCCC
Confidence 644 2333 7899999999986
No 149
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.28 E-value=3.3e-12 Score=110.70 Aligned_cols=96 Identities=15% Similarity=0.135 Sum_probs=76.3
Q ss_pred CCceeeEeeccccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--CCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~-~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~--~~~~yDl 233 (262)
++.+|||+|||+|..+..|+.. ...+|+++|+|+.|++.|++++.... ...+++|+++|+.++.+ ..++||+
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~fD~ 145 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH-----FENQVRIIEGNALEQFENVNDKVYDM 145 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT-----CTTTEEEEESCGGGCHHHHTTSCEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEECCHHHHHHhhccCCccE
Confidence 4679999999999999999942 25689999999999999999986531 12479999999987643 1368999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++... ......+++.+.+.|+||
T Consensus 146 V~~~~~-----~~~~~~~l~~~~~~Lkpg 169 (232)
T 3ntv_A 146 IFIDAA-----KAQSKKFFEIYTPLLKHQ 169 (232)
T ss_dssp EEEETT-----SSSHHHHHHHHGGGEEEE
T ss_pred EEEcCc-----HHHHHHHHHHHHHhcCCC
Confidence 997642 233458999999999996
No 150
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.28 E-value=1.5e-12 Score=120.53 Aligned_cols=90 Identities=11% Similarity=0.143 Sum_probs=75.7
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~--~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.+..+|||||||+|.++..|+ +.++ +++++|+ +.|++.|++. .+++|+.+|+.+ +.+ . ||+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~-~~~~~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~-~~~-~-~D~ 270 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELII-SKYPLIKGINFDL-PQVIENAPPL------------SGIEHVGGDMFA-SVP-Q-GDA 270 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHH-HHCTTCEEEEEEC-HHHHTTCCCC------------TTEEEEECCTTT-CCC-C-EEE
T ss_pred CCCCEEEEeCCCCcHHHHHHH-HHCCCCeEEEeCh-HHHHHhhhhc------------CCCEEEeCCccc-CCC-C-CCE
Confidence 356799999999999999999 4454 4667799 9999876652 258999999987 333 3 999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++++++||++|++...+|++++++|+||
T Consensus 271 v~~~~~lh~~~d~~~~~~l~~~~~~L~pg 299 (372)
T 1fp1_D 271 MILKAVCHNWSDEKCIEFLSNCHKALSPN 299 (372)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred EEEecccccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999889999999999996
No 151
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.28 E-value=3.8e-12 Score=118.08 Aligned_cols=91 Identities=14% Similarity=0.270 Sum_probs=75.9
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
.+..+|||||||+|.++..|++.. ..+++++|+ +.|++.|++. .+++|+.+|+.+. .+. . |+|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~~-~p~-~-D~v 265 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF------------SGVEHLGGDMFDG-VPK-G-DAI 265 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------------TTEEEEECCTTTC-CCC-C-SEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc------------CCCEEEecCCCCC-CCC-C-CEE
Confidence 356799999999999999999443 236888999 8888776542 3689999999873 332 3 999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.+++||++|++..++|++++++|+||
T Consensus 266 ~~~~vlh~~~~~~~~~~l~~~~~~L~pg 293 (368)
T 3reo_A 266 FIKWICHDWSDEHCLKLLKNCYAALPDH 293 (368)
T ss_dssp EEESCGGGBCHHHHHHHHHHHHHHSCTT
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCC
Confidence 9999999999999899999999999997
No 152
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.27 E-value=2.5e-12 Score=113.58 Aligned_cols=94 Identities=14% Similarity=-0.010 Sum_probs=76.6
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC---CCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~---~~~yD 232 (262)
++.+|||+|||+|.++..|+... ..+|++||+|+.|++.|++++... ...+++++++|++++.+. .++||
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~l~~v~~~~~d~~~~~~~~~~~~~fD 153 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVL------GLKGARALWGRAEVLAREAGHREAYA 153 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH------TCSSEEEEECCHHHHTTSTTTTTCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh------CCCceEEEECcHHHhhcccccCCCce
Confidence 56799999999999999999443 458999999999999999998643 234699999999887542 26899
Q ss_pred hhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|+|..+ .+. ..+++.+.++|+||
T Consensus 154 ~I~s~a~----~~~--~~ll~~~~~~Lkpg 177 (249)
T 3g89_A 154 RAVARAV----APL--CVLSELLLPFLEVG 177 (249)
T ss_dssp EEEEESS----CCH--HHHHHHHGGGEEEE
T ss_pred EEEECCc----CCH--HHHHHHHHHHcCCC
Confidence 9999743 343 48999999999986
No 153
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.27 E-value=6.7e-13 Score=112.53 Aligned_cols=78 Identities=19% Similarity=0.185 Sum_probs=64.9
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..+. .+|+++|+|+. ++.++++|+.+++.++++||+|++
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred CCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------------CceEEEeccccCCCCCCCEeEEEE
Confidence 46799999999999988774 57999999987 135788899887665678999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.++|| .+.. .+|+++.++|+||
T Consensus 122 ~~~l~~-~~~~--~~l~~~~~~L~~g 144 (215)
T 2zfu_A 122 CLSLMG-TNIR--DFLEEANRVLKPG 144 (215)
T ss_dssp ESCCCS-SCHH--HHHHHHHHHEEEE
T ss_pred ehhccc-cCHH--HHHHHHHHhCCCC
Confidence 999964 5555 9999999999986
No 154
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.26 E-value=4.7e-12 Score=117.39 Aligned_cols=91 Identities=13% Similarity=0.209 Sum_probs=76.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
.+..+|||||||+|.++..|++.. ..+++++|+ +.+++.|++. .+++|+.+|+.+ +.+. . |+|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~D~~~-~~p~-~-D~v 263 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF------------PGVTHVGGDMFK-EVPS-G-DTI 263 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------------TTEEEEECCTTT-CCCC-C-SEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc------------CCeEEEeCCcCC-CCCC-C-CEE
Confidence 356799999999999999999443 236888999 8888776542 378999999987 3333 3 999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++.+++||++|++..++|++++++|+||
T Consensus 264 ~~~~vlh~~~d~~~~~~L~~~~~~L~pg 291 (364)
T 3p9c_A 264 LMKWILHDWSDQHCATLLKNCYDALPAH 291 (364)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTT
T ss_pred EehHHhccCCHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999997
No 155
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.26 E-value=5.3e-12 Score=112.07 Aligned_cols=95 Identities=15% Similarity=0.160 Sum_probs=77.8
Q ss_pred CCCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccc
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yD 232 (262)
..++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++.... ...+++++++|+.+..+ .++||
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----g~~~v~~~~~d~~~~~~-~~~fD 181 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY-----DIGNVRTSRSDIADFIS-DQMYD 181 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS-----CCTTEEEECSCTTTCCC-SCCEE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC-----CCCcEEEEECchhccCc-CCCcc
Confidence 3457899999999999999999542 5689999999999999999875310 12478999999988533 36899
Q ss_pred hhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|++ |+++++ .+++++.+.|+||
T Consensus 182 ~Vi~-----~~~~~~--~~l~~~~~~Lkpg 204 (275)
T 1yb2_A 182 AVIA-----DIPDPW--NHVQKIASMMKPG 204 (275)
T ss_dssp EEEE-----CCSCGG--GSHHHHHHTEEEE
T ss_pred EEEE-----cCcCHH--HHHHHHHHHcCCC
Confidence 9998 677777 8999999999986
No 156
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.26 E-value=3.8e-12 Score=115.46 Aligned_cols=105 Identities=13% Similarity=0.121 Sum_probs=73.9
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~yDlI 234 (262)
++.+|||||||+|.++..+++.. ..+|++||+|+.|++.|++++...... .-...+++++.+|..++.. ..++||+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAG-SYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSS-CTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccc-cccCCceEEEEChHHHHHhhcCCCccEE
Confidence 46799999999999999999432 468999999999999999987542100 0023578999999988743 24689999
Q ss_pred hhhhHHhhcCchhH--HHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDF--VSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el--~~~l~~~~~~LkPG 262 (262)
++.......+...+ .+|++.+++.|+||
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~Lkpg 191 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPG 191 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCC
Confidence 99765444333333 57999999999986
No 157
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.26 E-value=1.2e-11 Score=109.01 Aligned_cols=97 Identities=6% Similarity=-0.078 Sum_probs=76.9
Q ss_pred cCCCCceeeEeeccccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC---CCC
Q 024811 154 RNNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PET 228 (262)
Q Consensus 154 ~~~~~~~VLDlGcGtG~lt~~La~~~~~--~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~---~~~ 228 (262)
++.++.+|||+|||+|..+..|+...++ +|.++|+|+.|++.+++++.. ..++.++..|..+.. ...
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~--------~~ni~~V~~d~~~p~~~~~~~ 145 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD--------RRNIFPILGDARFPEKYRHLV 145 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT--------CTTEEEEESCTTCGGGGTTTC
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh--------hcCeeEEEEeccCcccccccc
Confidence 4678999999999999999999955454 699999999999999998643 247888888886542 234
Q ss_pred CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+|+|++. +.|..+.+ .++.++.+.||||
T Consensus 146 ~~vDvVf~d--~~~~~~~~--~~l~~~~r~LKpG 175 (233)
T 4df3_A 146 EGVDGLYAD--VAQPEQAA--IVVRNARFFLRDG 175 (233)
T ss_dssp CCEEEEEEC--CCCTTHHH--HHHHHHHHHEEEE
T ss_pred ceEEEEEEe--ccCChhHH--HHHHHHHHhccCC
Confidence 689998864 34445555 8999999999996
No 158
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.25 E-value=3.3e-12 Score=114.92 Aligned_cols=98 Identities=9% Similarity=-0.007 Sum_probs=70.5
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEE--EcCCCCCCCCCCccc
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~--~~d~~~~~~~~~~yD 232 (262)
..++.+|||+|||||.++..++ +. .+|++||+|+ |+..++++.... .....++.|+ ++|+.+++ +++||
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la-~~-~~V~gVD~s~-m~~~a~~~~~~~----~~~~~~v~~~~~~~D~~~l~--~~~fD 150 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAA-SQ-PNVREVKAYT-LGTSGHEKPRLV----ETFGWNLITFKSKVDVTKME--PFQAD 150 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHH-TS-TTEEEEEEEC-CCCTTSCCCCCC----CCTTGGGEEEECSCCGGGCC--CCCCS
T ss_pred CCCCCEEEEeccCCCHHHHHHH-Hc-CCEEEEECch-hhhhhhhchhhh----hhcCCCeEEEeccCcHhhCC--CCCcC
Confidence 3457899999999999999999 55 6899999999 754443321100 0112268899 99998875 36899
Q ss_pred hhhhhhHHhhcCchhH-----HHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDDF-----VSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el-----~~~l~~~~~~LkPG 262 (262)
+|+|..+ ++..++.+ ..+|..+.++|+||
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpG 184 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYN 184 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccC
Confidence 9999877 55444321 13789999999997
No 159
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.25 E-value=5e-12 Score=110.00 Aligned_cols=94 Identities=14% Similarity=0.072 Sum_probs=76.7
Q ss_pred CCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++.... ...+++++.+|+.+..+ .++||+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~-~~~~D~ 165 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG-----FDDRVTIKLKDIYEGIE-EENVDH 165 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT-----CTTTEEEECSCGGGCCC-CCSEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC-----CCCceEEEECchhhccC-CCCcCE
Confidence 457899999999999999999542 5689999999999999999986431 12348999999987644 368999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++ +.+++. .+++++.++|+||
T Consensus 166 v~~-----~~~~~~--~~l~~~~~~L~~g 187 (255)
T 3mb5_A 166 VIL-----DLPQPE--RVVEHAAKALKPG 187 (255)
T ss_dssp EEE-----CSSCGG--GGHHHHHHHEEEE
T ss_pred EEE-----CCCCHH--HHHHHHHHHcCCC
Confidence 998 456666 8999999999986
No 160
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.25 E-value=7.6e-12 Score=107.91 Aligned_cols=95 Identities=11% Similarity=-0.127 Sum_probs=73.0
Q ss_pred CCCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC---CCCC
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~---~~~~ 229 (262)
..++.+|||+|||+|.++..|+... ..+|+++|+|+.|++.+.++... ..++.|+++|+.+.. ...+
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--------RTNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--------CTTEEEECSCTTCGGGGGGGCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--------cCCeEEEEcccCChhhhcccCC
Confidence 3457899999999999999999553 25899999999988877776532 147899999998842 2346
Q ss_pred ccchhhhhhHHhhcCchh-HHHHHHHHHhhccCC
Q 024811 230 RYDVIWVQWCIGHLTDDD-FVSFFKRAKVNHSQT 262 (262)
Q Consensus 230 ~yDlI~s~~vl~hltD~e-l~~~l~~~~~~LkPG 262 (262)
+||+|++..+ .++ ...++.++.+.|+||
T Consensus 147 ~~D~V~~~~~-----~~~~~~~~~~~~~~~Lkpg 175 (233)
T 2ipx_A 147 MVDVIFADVA-----QPDQTRIVALNAHTFLRNG 175 (233)
T ss_dssp CEEEEEECCC-----CTTHHHHHHHHHHHHEEEE
T ss_pred cEEEEEEcCC-----CccHHHHHHHHHHHHcCCC
Confidence 8999999654 332 235788999999986
No 161
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.25 E-value=3.1e-13 Score=113.25 Aligned_cols=100 Identities=12% Similarity=0.029 Sum_probs=58.8
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC----CCc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGR 230 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~----~~~ 230 (262)
.++.+|||+|||+|.++..++... ..+|+++|+|+.|++.|++++... .. +++++++|+.+..+. .++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~-~~~~~~~d~~~~~~~~~~~~~~ 101 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF------GA-VVDWAAADGIEWLIERAERGRP 101 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------------CCHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh------CC-ceEEEEcchHhhhhhhhhccCc
Confidence 357899999999999999999443 338999999999999999987542 11 678888888763221 268
Q ss_pred cchhhhhhHH------hhcCchhH------------------HHHHHHHHhhccCC
Q 024811 231 YDVIWVQWCI------GHLTDDDF------------------VSFFKRAKVNHSQT 262 (262)
Q Consensus 231 yDlI~s~~vl------~hltD~el------------------~~~l~~~~~~LkPG 262 (262)
||+|+++.++ +|+++... ..+++++.++|+||
T Consensus 102 fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 157 (215)
T 4dzr_A 102 WHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARG 157 (215)
T ss_dssp BSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSS
T ss_pred ccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCC
Confidence 9999997543 34433321 57999999999997
No 162
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.25 E-value=1.1e-11 Score=104.41 Aligned_cols=93 Identities=20% Similarity=0.186 Sum_probs=75.8
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++... .. +++++++|+.+++ ++||+|++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~-~~~~~~~d~~~~~---~~~D~v~~ 118 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEF------KG-KFKVFIGDVSEFN---SRVDIVIM 118 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG------TT-SEEEEESCGGGCC---CCCSEEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc------CC-CEEEEECchHHcC---CCCCEEEE
Confidence 46799999999999999999443457999999999999999997542 11 6899999999873 48999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhc
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNH 259 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~L 259 (262)
+.++++........+++++.+.|
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC
T ss_pred cCCCccccCCchHHHHHHHHHhc
Confidence 99888877544457888877765
No 163
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.24 E-value=7.1e-12 Score=109.86 Aligned_cols=86 Identities=14% Similarity=0.044 Sum_probs=72.0
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
++.+|||+|||+|.++..++... +.+|+++|+|+.|++.|+++.. ++.|+..|+.+++..+++||+|+
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~~~~~fD~v~ 153 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP-----------QVTFCVASSHRLPFSDTSMDAII 153 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTSCSBCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC-----------CcEEEEcchhhCCCCCCceeEEE
Confidence 46799999999999999999443 5689999999999999998752 57899999988866567999999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++++ . .+++++.++|+||
T Consensus 154 ~~~~-------~--~~l~~~~~~L~pg 171 (269)
T 1p91_A 154 RIYA-------P--CKAEELARVVKPG 171 (269)
T ss_dssp EESC-------C--CCHHHHHHHEEEE
T ss_pred EeCC-------h--hhHHHHHHhcCCC
Confidence 8654 1 3688899999986
No 164
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.24 E-value=6.5e-12 Score=107.15 Aligned_cols=96 Identities=18% Similarity=0.097 Sum_probs=75.0
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-----CC
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-----TG 229 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~-----~~ 229 (262)
++.+|||+|||+|..+..|+... ..+|+++|+++.+++.|++++.... ...+++++++|+.++.+. .+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~ 132 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN-----LNDRVEVRTGLALDSLQQIENEKYE 132 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEESCHHHHHHHHHHTTCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEEcCHHHHHHHHHhcCCC
Confidence 46799999999999999999432 4589999999999999999986431 123589999998764221 15
Q ss_pred ccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 230 ~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+||+|++... ......+|+.+.++|+||
T Consensus 133 ~fD~v~~d~~-----~~~~~~~l~~~~~~L~pg 160 (223)
T 3duw_A 133 PFDFIFIDAD-----KQNNPAYFEWALKLSRPG 160 (223)
T ss_dssp CCSEEEECSC-----GGGHHHHHHHHHHTCCTT
T ss_pred CcCEEEEcCC-----cHHHHHHHHHHHHhcCCC
Confidence 7999998654 223448999999999997
No 165
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=7.3e-12 Score=108.64 Aligned_cols=95 Identities=19% Similarity=0.202 Sum_probs=77.3
Q ss_pred CCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++.... ...+++++..|+.+.+.+.++||+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-----g~~~v~~~~~d~~~~~~~~~~~D~ 169 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW-----QVENVRFHLGKLEEAELEEAAYDG 169 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC-----CCCCEEEEESCGGGCCCCTTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCCCEEEEECchhhcCCCCCCcCE
Confidence 457899999999999999999542 5689999999999999999875320 024789999999887444468999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++ +++++. .+++++.++|+||
T Consensus 170 v~~-----~~~~~~--~~l~~~~~~L~~g 191 (258)
T 2pwy_A 170 VAL-----DLMEPW--KVLEKAALALKPD 191 (258)
T ss_dssp EEE-----ESSCGG--GGHHHHHHHEEEE
T ss_pred EEE-----CCcCHH--HHHHHHHHhCCCC
Confidence 998 456666 8999999999986
No 166
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.24 E-value=1.1e-11 Score=108.65 Aligned_cols=96 Identities=18% Similarity=0.124 Sum_probs=75.3
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC---CCCcc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGRY 231 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~---~~~~y 231 (262)
++.+|||||||+|..+..|+... ..+|+++|+|+.+++.|++++.... ...+++++.+|+.++.+ ..++|
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g-----~~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG-----VDQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT-----CTTTEEEEESCHHHHHHTCCSCCCC
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEEcCHHHHHHhcCCCCCe
Confidence 46799999999999999999432 4589999999999999999986531 12479999999876422 12489
Q ss_pred chhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 232 DVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 232 DlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+|++... ......+|+++.++|+||
T Consensus 138 D~V~~d~~-----~~~~~~~l~~~~~~LkpG 163 (248)
T 3tfw_A 138 DLIFIDAD-----KPNNPHYLRWALRYSRPG 163 (248)
T ss_dssp SEEEECSC-----GGGHHHHHHHHHHTCCTT
T ss_pred EEEEECCc-----hHHHHHHHHHHHHhcCCC
Confidence 99998642 334457999999999997
No 167
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.24 E-value=5.9e-12 Score=109.15 Aligned_cols=95 Identities=13% Similarity=0.118 Sum_probs=74.9
Q ss_pred CceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCC-cceEEEEcCCCCCCCC--CCccc
Q 024811 158 HLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCVPLQDFTPE--TGRYD 232 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~-~~v~f~~~d~~~~~~~--~~~yD 232 (262)
..+|||||||+|..+..|+... ..+|++||+|+.|++.|++++..+. .. .+++|+++|+.++.+. .++||
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-----~~~~~i~~~~gda~~~l~~~~~~~fD 131 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG-----YSPSRVRFLLSRPLDVMSRLANDSYQ 131 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT-----CCGGGEEEECSCHHHHGGGSCTTCEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCcCcEEEEEcCHHHHHHHhcCCCcC
Confidence 3489999999999999999543 4589999999999999999986531 12 4799999998776322 47899
Q ss_pred hhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|++.... .....+++.+.++|+||
T Consensus 132 ~V~~d~~~-----~~~~~~l~~~~~~LkpG 156 (221)
T 3dr5_A 132 LVFGQVSP-----MDLKALVDAAWPLLRRG 156 (221)
T ss_dssp EEEECCCT-----TTHHHHHHHHHHHEEEE
T ss_pred eEEEcCcH-----HHHHHHHHHHHHHcCCC
Confidence 99986432 23347999999999996
No 168
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.24 E-value=7.3e-13 Score=109.28 Aligned_cols=82 Identities=6% Similarity=0.006 Sum_probs=70.1
Q ss_pred cCCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC---CCCc
Q 024811 154 RNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGR 230 (262)
Q Consensus 154 ~~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~---~~~~ 230 (262)
+.+++.+|||+|||. | .+|+|+.|++.|+++... +++|+++|++++++ ++++
T Consensus 9 g~~~g~~vL~~~~g~--------------v-~vD~s~~ml~~a~~~~~~----------~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS--------------S-PVEALKGLVDKLQALTGN----------EGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp TCCTTSEEEEEECTT--------------S-CHHHHHHHHHHHHHHTTT----------TSEEEEEEGGGGGGGCCCSSC
T ss_pred CCCCCCEEEEecCCc--------------e-eeeCCHHHHHHHHHhccc----------CcEEEEechhcCccccCCCCC
Confidence 355788999999996 2 299999999999998631 47899999998865 5579
Q ss_pred cchhhhhhHHhhc-CchhHHHHHHHHHhhccCC
Q 024811 231 YDVIWVQWCIGHL-TDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 231 yDlI~s~~vl~hl-tD~el~~~l~~~~~~LkPG 262 (262)
||+|+|++++||+ +|.+ .+|++++++||||
T Consensus 64 fD~V~~~~~l~~~~~~~~--~~l~~~~r~Lkpg 94 (176)
T 2ld4_A 64 FDIILSGLVPGSTTLHSA--EILAEIARILRPG 94 (176)
T ss_dssp EEEEEECCSTTCCCCCCH--HHHHHHHHHEEEE
T ss_pred EeEEEECChhhhcccCHH--HHHHHHHHHCCCC
Confidence 9999999999999 7776 9999999999996
No 169
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.23 E-value=1e-11 Score=111.02 Aligned_cols=101 Identities=10% Similarity=0.087 Sum_probs=75.1
Q ss_pred CCceeeEeeccccHHHHHHHHhcCC-cEEEEeC-CHHHHHHHHhhcccccccCCCCC----cceEEEEcCCCCCC--C--
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEP-VSHFLDAARESLAPENHMAPDMH----KATNFFCVPLQDFT--P-- 226 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~-~V~~VD~-s~~mld~Ar~~l~~a~~~~~~~~----~~v~f~~~d~~~~~--~-- 226 (262)
++.+|||+|||+|.++..++ ..+. +|+++|. |+.|++.|++++..-........ .++.+...++.+.. .
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a-~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAF-LAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHH-HTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHH-HcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 46799999999999999999 4444 8999999 89999999998721000000000 25788877765531 1
Q ss_pred --CCCccchhhhhhHHhhcCchhHHHHHHHHHhhcc
Q 024811 227 --ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHS 260 (262)
Q Consensus 227 --~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~Lk 260 (262)
..++||+|++..+++|..+.+ .+++.+.++|+
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~~~--~ll~~l~~~Lk 191 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQAHD--ALLRSVKMLLA 191 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGGHH--HHHHHHHHHBC
T ss_pred hccCCCCCEEEEeCcccChHHHH--HHHHHHHHHhc
Confidence 236899999999999977766 99999999999
No 170
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.23 E-value=3.7e-12 Score=115.59 Aligned_cols=103 Identities=14% Similarity=0.154 Sum_probs=75.2
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--CCCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~--~~~~yD 232 (262)
++.+|||||||+|.++..++ +. ..+|++||+|+.+++.|++++...... ....+++++.+|+.++.. ..++||
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~-~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVL-RHGTVEHCDLVDIDGEVMEQSKQHFPQISRS--LADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHH-TCTTCCEEEEEESCHHHHHHHHHHCHHHHGG--GGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCeEEEEcCCCCHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHhHHhhcc--cCCCcEEEEECcHHHHHHhccCCcee
Confidence 46799999999999999999 54 458999999999999999987321000 013478999999987642 246899
Q ss_pred hhhhhhHHhhcCchhH--HHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDDF--VSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el--~~~l~~~~~~LkPG 262 (262)
+|++..+.++.++..+ .+++++++++|+||
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg 203 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPD 203 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCC
Confidence 9999876655554433 48999999999986
No 171
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.23 E-value=3.6e-12 Score=111.20 Aligned_cols=101 Identities=12% Similarity=-0.034 Sum_probs=69.0
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC---CCC---CC
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE---TG 229 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~---~~~---~~ 229 (262)
++.+|||+|||+|.++..|+... ..+|+++|+|+.|++.|++++.... ...+++|+++|+.+. ... ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN-----LSDLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC-----CCccEEEEEcchhhhhhhhhhcccCC
Confidence 46699999999999999999543 4689999999999999999986421 123589999997662 122 15
Q ss_pred ccchhhhhhHHhhcC-c------------hhHHHHHHHHHhhccCC
Q 024811 230 RYDVIWVQWCIGHLT-D------------DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 230 ~yDlI~s~~vl~hlt-D------------~el~~~l~~~~~~LkPG 262 (262)
+||+|+|+.++++.. + .....++..+.++|+||
T Consensus 140 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkpg 185 (254)
T 2h00_A 140 IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEG 185 (254)
T ss_dssp CBSEEEECCCCC-------------------------CTTTTHHHH
T ss_pred cccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecC
Confidence 899999997655443 1 01124667778888875
No 172
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.23 E-value=9.4e-12 Score=105.53 Aligned_cols=95 Identities=12% Similarity=0.138 Sum_probs=73.8
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC-CCCCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~-~~~~~~yDl 233 (262)
++.+|||+|||+|..+..|+... ..+|+++|+|+.|++.|++++.... ...+++++.+|..++ +..++ ||+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~-fD~ 129 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG-----LIDRVELQVGDPLGIAAGQRD-IDI 129 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS-----GGGGEEEEESCHHHHHTTCCS-EEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-----CCceEEEEEecHHHHhccCCC-CCE
Confidence 36799999999999999999332 4589999999999999999876431 123689999998765 22235 999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++... . .+...+++++.++|+||
T Consensus 130 v~~~~~---~--~~~~~~l~~~~~~Lkpg 153 (210)
T 3c3p_A 130 LFMDCD---V--FNGADVLERMNRCLAKN 153 (210)
T ss_dssp EEEETT---T--SCHHHHHHHHGGGEEEE
T ss_pred EEEcCC---h--hhhHHHHHHHHHhcCCC
Confidence 998732 2 23448999999999986
No 173
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.23 E-value=1.6e-11 Score=105.08 Aligned_cols=95 Identities=11% Similarity=-0.036 Sum_probs=74.2
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC---CCCC
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~---~~~~ 229 (262)
..++.+|||+|||+|.++..|+...+ .+|+++|+|+.|++.+++++.. ..++.++++|+.+.. +..+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~--------~~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE--------RRNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS--------CTTEEEEECCTTCGGGGTTTCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc--------cCCCEEEEccCCCcchhhcccC
Confidence 34577999999999999999995532 5899999999999999998753 147899999998732 1235
Q ss_pred ccchhhhhhHHhhcCchhH-HHHHHHHHhhccCC
Q 024811 230 RYDVIWVQWCIGHLTDDDF-VSFFKRAKVNHSQT 262 (262)
Q Consensus 230 ~yDlI~s~~vl~hltD~el-~~~l~~~~~~LkPG 262 (262)
+||+|++..+ .++. ..++.++.+.|+||
T Consensus 143 ~~D~v~~~~~-----~~~~~~~~l~~~~~~Lkpg 171 (227)
T 1g8a_A 143 KVDVIFEDVA-----QPTQAKILIDNAEVYLKRG 171 (227)
T ss_dssp CEEEEEECCC-----STTHHHHHHHHHHHHEEEE
T ss_pred CceEEEECCC-----CHhHHHHHHHHHHHhcCCC
Confidence 8999997654 2322 25699999999996
No 174
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.22 E-value=1.2e-11 Score=116.14 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=78.8
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||||||+|.++...++....+|.+||.|+ |++.|++.+..- ....++.++.++++++..+ ++||+|||
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n-----~~~~~i~~i~~~~~~~~lp-e~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFN-----GLEDRVHVLPGPVETVELP-EQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHT-----TCTTTEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHc-----CCCceEEEEeeeeeeecCC-ccccEEEe
Confidence 4678999999999999988843346899999996 899999877531 2235799999999999765 69999999
Q ss_pred hhHHhhcCch-hHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDD-DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~-el~~~l~~~~~~LkPG 262 (262)
.|.-..+-.+ .+..++....+.|+||
T Consensus 156 E~~~~~l~~e~~l~~~l~a~~r~Lkp~ 182 (376)
T 4hc4_A 156 EWMGYGLLHESMLSSVLHARTKWLKEG 182 (376)
T ss_dssp CCCBTTBTTTCSHHHHHHHHHHHEEEE
T ss_pred ecccccccccchhhhHHHHHHhhCCCC
Confidence 7764555444 4558999999999986
No 175
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.22 E-value=3.9e-12 Score=108.87 Aligned_cols=98 Identities=19% Similarity=0.160 Sum_probs=74.2
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC------CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC----
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~------~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~---- 225 (262)
.++.+|||+|||+|.++..|+.... .+|+++|+|+.+++.|++++...... .....+++++.+|+.+..
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPE-LLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGG-GGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcc-ccccCCEEEEECChHhcccccC
Confidence 3578999999999999999994433 38999999999999999987643100 000247899999998754
Q ss_pred CCCCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 226 ~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+..++||+|++..+++|+. +.+.+.|+||
T Consensus 158 ~~~~~fD~I~~~~~~~~~~--------~~~~~~Lkpg 186 (227)
T 2pbf_A 158 KELGLFDAIHVGASASELP--------EILVDLLAEN 186 (227)
T ss_dssp HHHCCEEEEEECSBBSSCC--------HHHHHHEEEE
T ss_pred ccCCCcCEEEECCchHHHH--------HHHHHhcCCC
Confidence 3346899999998887763 5677788875
No 176
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=5.4e-12 Score=107.64 Aligned_cols=96 Identities=13% Similarity=0.096 Sum_probs=74.5
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-C-----
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-T----- 228 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~-~----- 228 (262)
++.+|||+|||+|..+..|+... ..+|+++|+|+.|++.|++++.... ...+++|+++|+.++.+. .
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG-----LSDKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEESCHHHHHHHHHTTTCT
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC-----CCCceEEEeCCHHHHHHHhhhccCC
Confidence 46799999999999999999432 4689999999999999999986531 123589999998665221 1
Q ss_pred CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++||+|++... ..+...+++.+.++|+||
T Consensus 139 ~~fD~v~~~~~-----~~~~~~~l~~~~~~L~pg 167 (225)
T 3tr6_A 139 WQYDLIYIDAD-----KANTDLYYEESLKLLREG 167 (225)
T ss_dssp TCEEEEEECSC-----GGGHHHHHHHHHHHEEEE
T ss_pred CCccEEEECCC-----HHHHHHHHHHHHHhcCCC
Confidence 58999996542 233458999999999996
No 177
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.22 E-value=1.3e-11 Score=107.60 Aligned_cols=101 Identities=12% Similarity=0.162 Sum_probs=73.8
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCC--CCcceEEEEcCCCCC-C--CCCCc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPD--MHKATNFFCVPLQDF-T--PETGR 230 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~--~~~~v~f~~~d~~~~-~--~~~~~ 230 (262)
++.+|||||||+|.++..++... ..+|++||+|+.|++.|++++......... ...++.++++|+.++ + .+.+.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 46799999999999999999443 236999999999999999987532110000 224799999999873 2 23468
Q ss_pred cchhhhhhHHhhcCchhH-----------HHHHHHHHhhccCC
Q 024811 231 YDVIWVQWCIGHLTDDDF-----------VSFFKRAKVNHSQT 262 (262)
Q Consensus 231 yDlI~s~~vl~hltD~el-----------~~~l~~~~~~LkPG 262 (262)
+|.|++. ++|+.. ..++.++.++|+||
T Consensus 129 ~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~Lkpg 166 (246)
T 2vdv_E 129 LSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEG 166 (246)
T ss_dssp EEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEE
T ss_pred cCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCC
Confidence 8888744 344421 37999999999986
No 178
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.22 E-value=7.6e-12 Score=107.76 Aligned_cols=96 Identities=11% Similarity=0.134 Sum_probs=76.6
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-C--CCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-E--TGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~--~~~yD 232 (262)
++.+|||+|||+|..+..|+... ..+|+++|+|+.+++.|++++.... ...+++++.+|+.++.+ . .++||
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~fD 128 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG-----LESRIELLFGDALQLGEKLELYPLFD 128 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT-----CTTTEEEECSCGGGSHHHHTTSCCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEECCHHHHHHhcccCCCcc
Confidence 46799999999999999999443 4689999999999999999986431 12368999999887522 1 36899
Q ss_pred hhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|++..+.+ +...+++.+.+.|+||
T Consensus 129 ~I~~~~~~~-----~~~~~l~~~~~~L~pg 153 (233)
T 2gpy_A 129 VLFIDAAKG-----QYRRFFDMYSPMVRPG 153 (233)
T ss_dssp EEEEEGGGS-----CHHHHHHHHGGGEEEE
T ss_pred EEEECCCHH-----HHHHHHHHHHHHcCCC
Confidence 999987643 3448999999999986
No 179
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.21 E-value=5.3e-12 Score=111.34 Aligned_cols=92 Identities=14% Similarity=0.108 Sum_probs=75.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..++ +.+.+|+++|+|+.+++.|++++... ... ++++.+|+.+..+ .++||+|++
T Consensus 120 ~~~~VLDiGcG~G~l~~~la-~~g~~v~gvDi~~~~v~~a~~n~~~~------~~~-v~~~~~d~~~~~~-~~~fD~Vv~ 190 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRN------GVR-PRFLEGSLEAALP-FGPFDLLVA 190 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHT------TCC-CEEEESCHHHHGG-GCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHH-HhCCeEEEEECCHHHHHHHHHHHHHc------CCc-EEEEECChhhcCc-CCCCCEEEE
Confidence 46799999999999999999 55669999999999999999987532 112 7899998876422 368999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+...++ +..++..+.+.|+||
T Consensus 191 n~~~~~-----~~~~l~~~~~~Lkpg 211 (254)
T 2nxc_A 191 NLYAEL-----HAALAPRYREALVPG 211 (254)
T ss_dssp ECCHHH-----HHHHHHHHHHHEEEE
T ss_pred CCcHHH-----HHHHHHHHHHHcCCC
Confidence 876654 348999999999986
No 180
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.21 E-value=5.4e-12 Score=109.13 Aligned_cols=93 Identities=16% Similarity=0.125 Sum_probs=72.5
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.++..|+.....+|+++|+|+.+++.|++++... ...+++++.+|+..-.+...+||+|+
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~fD~Ii 163 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERA------GVKNVHVILGDGSKGFPPKAPYDVII 163 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHc------CCCCcEEEECCcccCCCCCCCccEEE
Confidence 357799999999999999999443378999999999999999987643 22358999999732212224699999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+..+++|+.+ ++.+.|+||
T Consensus 164 ~~~~~~~~~~--------~~~~~L~pg 182 (235)
T 1jg1_A 164 VTAGAPKIPE--------PLIEQLKIG 182 (235)
T ss_dssp ECSBBSSCCH--------HHHHTEEEE
T ss_pred ECCcHHHHHH--------HHHHhcCCC
Confidence 9999888874 467788875
No 181
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.21 E-value=3.2e-11 Score=103.93 Aligned_cols=94 Identities=22% Similarity=0.336 Sum_probs=77.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++.... ...+++++..|+.+..+..+.||+|+
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~D~v~ 163 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFN-----LGKNVKFFNVDFKDAEVPEGIFHAAF 163 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTT-----CCTTEEEECSCTTTSCCCTTCBSEEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcC-----CCCcEEEEEcChhhcccCCCcccEEE
Confidence 35779999999999999999955 7899999999999999999875421 12478999999988752346899999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+ +.+++. .+++++.++|+||
T Consensus 164 ~-----~~~~~~--~~l~~~~~~L~~g 183 (248)
T 2yvl_A 164 V-----DVREPW--HYLEKVHKSLMEG 183 (248)
T ss_dssp E-----CSSCGG--GGHHHHHHHBCTT
T ss_pred E-----CCcCHH--HHHHHHHHHcCCC
Confidence 7 345665 8999999999997
No 182
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.20 E-value=1e-11 Score=114.23 Aligned_cols=101 Identities=16% Similarity=0.043 Sum_probs=79.6
Q ss_pred CCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.++.+|||+|||+|.++..++... ..+|.++|+|+.|++.|++++..+ ...+++|+++|+.++++....||+
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~------g~~~i~~~~~D~~~~~~~~~~~D~ 275 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS------GLSWIRFLRADARHLPRFFPEVDR 275 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT------TCTTCEEEECCGGGGGGTCCCCSE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc------CCCceEEEeCChhhCccccCCCCE
Confidence 356799999999999999999433 268999999999999999998754 122789999999998765567999
Q ss_pred hhhhhHHhhcCc--hh----HHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTD--DD----FVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD--~e----l~~~l~~~~~~LkPG 262 (262)
|+++.+++.... .+ ...+++.+.+.|+||
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTT
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCC
Confidence 999876543221 11 247999999999986
No 183
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.20 E-value=6.8e-12 Score=111.91 Aligned_cols=94 Identities=15% Similarity=0.050 Sum_probs=76.1
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
.++.+|||+|||+|.++..++... ..+|+++|.|+.|++.|++++... ...++.|+++|+.++ +..++||+|
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n------~l~~~~~~~~d~~~~-~~~~~~D~V 190 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLN------KLNNVIPILADNRDV-ELKDVADRV 190 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHT------TCSSEEEEESCGGGC-CCTTCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCEEEEECChHHc-CccCCceEE
Confidence 357799999999999999999442 238999999999999999998542 234688999999988 434689999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++..+. +.. .++..+.+.|+||
T Consensus 191 i~d~p~----~~~--~~l~~~~~~Lkpg 212 (272)
T 3a27_A 191 IMGYVH----KTH--KFLDKTFEFLKDR 212 (272)
T ss_dssp EECCCS----SGG--GGHHHHHHHEEEE
T ss_pred EECCcc----cHH--HHHHHHHHHcCCC
Confidence 998653 333 7889999999986
No 184
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.20 E-value=1.1e-11 Score=109.20 Aligned_cols=96 Identities=16% Similarity=0.096 Sum_probs=77.7
Q ss_pred CCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccc-cccCCCCCcceEEEEcCCCCCCCCCCccc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a-~~~~~~~~~~v~f~~~d~~~~~~~~~~yD 232 (262)
.++.+|||+|||+|.++..|+... ..+|+++|+|+.+++.|++++... .. ...+++++.+|+.+...+.++||
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~----~~~~v~~~~~d~~~~~~~~~~~D 173 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ----PPDNWRLVVSDLADSELPDGSVD 173 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS----CCTTEEEECSCGGGCCCCTTCEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC----CCCcEEEEECchHhcCCCCCcee
Confidence 457799999999999999999543 468999999999999999987532 10 12478999999988755456899
Q ss_pred hhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+|++ +++++. .+++++.++|+||
T Consensus 174 ~v~~-----~~~~~~--~~l~~~~~~L~pg 196 (280)
T 1i9g_A 174 RAVL-----DMLAPW--EVLDAVSRLLVAG 196 (280)
T ss_dssp EEEE-----ESSCGG--GGHHHHHHHEEEE
T ss_pred EEEE-----CCcCHH--HHHHHHHHhCCCC
Confidence 9998 556776 8999999999986
No 185
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.20 E-value=8.2e-12 Score=114.85 Aligned_cols=88 Identities=17% Similarity=0.319 Sum_probs=74.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~--~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
...+|||||||+|.++..|+ +.++ +++++|+ +.|++.|++. .+++|+.+|+.+ +.+ .||+|
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~-~~~--~~D~v 255 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIH-EIFPHLKCTVFDQ-PQVVGNLTGN------------ENLNFVGGDMFK-SIP--SADAV 255 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHH-HHCTTSEEEEEEC-HHHHSSCCCC------------SSEEEEECCTTT-CCC--CCSEE
T ss_pred CCCEEEEECCCcCHHHHHHH-HHCCCCeEEEecc-HHHHhhcccC------------CCcEEEeCccCC-CCC--CceEE
Confidence 35799999999999999999 4444 6788899 7888766541 258999999987 333 49999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQ 261 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkP 261 (262)
++++++||++|++...+|++++++|+|
T Consensus 256 ~~~~vlh~~~d~~~~~~l~~~~~~L~p 282 (358)
T 1zg3_A 256 LLKWVLHDWNDEQSLKILKNSKEAISH 282 (358)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHTGG
T ss_pred EEcccccCCCHHHHHHHHHHHHHhCCC
Confidence 999999999999988999999999999
No 186
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.19 E-value=4.1e-12 Score=109.19 Aligned_cols=98 Identities=13% Similarity=0.059 Sum_probs=74.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC-------CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF-------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET 228 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~-------~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~ 228 (262)
.++.+|||+|||+|.++..|+.... .+|+++|+++.+++.|++++...... .....++.++.+|+.+..+..
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS-MLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHH-HHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcc-ccCCCceEEEECCcccCCCcC
Confidence 3577999999999999999995443 38999999999999999987542100 000236899999987733333
Q ss_pred CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++||+|++..+++|+. +++.+.|+||
T Consensus 162 ~~fD~I~~~~~~~~~~--------~~~~~~Lkpg 187 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP--------TELINQLASG 187 (227)
T ss_dssp CSEEEEEECSCBSSCC--------HHHHHTEEEE
T ss_pred CCccEEEECCchHHHH--------HHHHHHhcCC
Confidence 6899999999888876 4577888875
No 187
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.19 E-value=2e-11 Score=109.73 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=62.9
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.+|..|+ +.+.+|++||+|+.|++.+++++.... ...+++++++|+.+++.+ .||+|+
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~-~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~v~~~~~D~~~~~~~--~fD~vv 98 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLL-EKAKKVVACELDPRLVAELHKRVQGTP-----VASKLQVLVGDVLKTDLP--FFDTCV 98 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHH-HHSSEEEEEESCHHHHHHHHHHHTTST-----TGGGEEEEESCTTTSCCC--CCSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHH-hhCCEEEEEECCHHHHHHHHHHHHhcC-----CCCceEEEEcceecccch--hhcEEE
Confidence 357799999999999999999 557799999999999999999875321 124789999999987653 799999
Q ss_pred hhhH
Q 024811 236 VQWC 239 (262)
Q Consensus 236 s~~v 239 (262)
++.+
T Consensus 99 ~nlp 102 (285)
T 1zq9_A 99 ANLP 102 (285)
T ss_dssp EECC
T ss_pred EecC
Confidence 9754
No 188
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.18 E-value=3.6e-12 Score=102.75 Aligned_cols=89 Identities=7% Similarity=0.037 Sum_probs=71.6
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC--------C
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--------P 226 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~--------~ 226 (262)
++.+|||+|||+|.++..++... ..+|+++|+|+ |++. .+++++++|+.+.+ .
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------------~~~~~~~~d~~~~~~~~~~~~~~ 84 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------------VGVDFLQGDFRDELVMKALLERV 84 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------------TTEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------------CcEEEEEcccccchhhhhhhccC
Confidence 56799999999999999999553 36899999999 7532 26789999998864 3
Q ss_pred CCCccchhhhhhHHhhcCchhH---------HHHHHHHHhhccCC
Q 024811 227 ETGRYDVIWVQWCIGHLTDDDF---------VSFFKRAKVNHSQT 262 (262)
Q Consensus 227 ~~~~yDlI~s~~vl~hltD~el---------~~~l~~~~~~LkPG 262 (262)
++++||+|+++.+++++.+... ..+++++.++|+||
T Consensus 85 ~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g 129 (180)
T 1ej0_A 85 GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG 129 (180)
T ss_dssp TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC
Confidence 3468999999988887766511 38999999999986
No 189
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.18 E-value=1.3e-11 Score=111.41 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=83.4
Q ss_pred hHHHHHHHHhhccCCCccCCCCceeeEeeccc--cHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCc
Q 024811 137 GSEAFLQMLLSDRFPNARNNQHLVALDCGSGI--GRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHK 212 (262)
Q Consensus 137 ~s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGt--G~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~ 212 (262)
..+.|+..... .+. ......+|||||||+ +..+..++.+. ..+|++||.|+.|++.|++++... ...
T Consensus 61 ~nr~fl~rav~-~l~--~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~------~~~ 131 (277)
T 3giw_A 61 ANRDWMNRAVA-HLA--KEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST------PEG 131 (277)
T ss_dssp HHHHHHHHHHH-HHH--HTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC------SSS
T ss_pred HHHHHHHHHHH-Hhc--cccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC------CCC
Confidence 45677776543 111 001235899999997 43445555343 358999999999999999988542 123
Q ss_pred ceEEEEcCCCCCCC----C--CCccc-----hhhhhhHHhhcCchh-HHHHHHHHHhhccCC
Q 024811 213 ATNFFCVPLQDFTP----E--TGRYD-----VIWVQWCIGHLTDDD-FVSFFKRAKVNHSQT 262 (262)
Q Consensus 213 ~v~f~~~d~~~~~~----~--~~~yD-----lI~s~~vl~hltD~e-l~~~l~~~~~~LkPG 262 (262)
+++|+++|+.++.. . .+.|| +|+++.+|||++|.+ ...+|+++.+.|+||
T Consensus 132 ~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PG 193 (277)
T 3giw_A 132 RTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSG 193 (277)
T ss_dssp EEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTT
T ss_pred cEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCC
Confidence 68999999998521 0 13466 488899999999975 458999999999998
No 190
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.18 E-value=1.4e-11 Score=109.97 Aligned_cols=93 Identities=13% Similarity=0.020 Sum_probs=75.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
.+.+|||||||+|.++..+++. ..+|++||+++.|++.|++++...... -..++++++.+|..++. ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~--~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEV--KNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHH--HTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccc--cCCCeEEEEechHHHHH---hhCCEEEE
Confidence 4579999999999999999955 578999999999999999987431000 01247899999998874 58999998
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
. .+|+. .|++.+++.|+||
T Consensus 146 d-----~~dp~--~~~~~~~~~L~pg 164 (262)
T 2cmg_A 146 L-----QEPDI--HRIDGLKRMLKED 164 (262)
T ss_dssp S-----SCCCH--HHHHHHHTTEEEE
T ss_pred C-----CCChH--HHHHHHHHhcCCC
Confidence 6 46776 6999999999996
No 191
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.18 E-value=2.3e-11 Score=116.03 Aligned_cols=101 Identities=14% Similarity=0.015 Sum_probs=73.5
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcC-CcEEEEeCCHHHHHHH-------HhhcccccccCCCCCcceEEEEcCCC-C--
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAA-------RESLAPENHMAPDMHKATNFFCVPLQ-D-- 223 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~-~~V~~VD~s~~mld~A-------r~~l~~a~~~~~~~~~~v~f~~~d~~-~-- 223 (262)
..++.+|||+|||+|.++..|+.... .+|++||.|+.+++.| ++++.... ....+++|+++|.. +
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G----l~~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG----MRLNNVEFSLKKSFVDNN 315 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT----BCCCCEEEEESSCSTTCH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC----CCCCceEEEEcCcccccc
Confidence 34678999999999999999995433 4799999999999999 55543210 00247889887543 2
Q ss_pred -CCCCCCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 224 -FTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 224 -~~~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+....++||+|+++.++ +. +++..+|+++.+.|+||
T Consensus 316 ~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpG 352 (433)
T 1u2z_A 316 RVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVG 352 (433)
T ss_dssp HHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTT
T ss_pred ccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCC
Confidence 11113689999988665 33 44558999999999997
No 192
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.17 E-value=1.6e-11 Score=113.03 Aligned_cols=101 Identities=14% Similarity=0.050 Sum_probs=76.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC----CCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~----~~~yD 232 (262)
++.+|||+|||+|.++..++ ..+.+|++||.|+.|++.|++++....- ...+++|+++|+.++.+. .++||
T Consensus 153 ~~~~VLDlgcGtG~~sl~la-~~ga~V~~VD~s~~al~~a~~n~~~~gl----~~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAA-AAGAEVTHVDASKKAIGWAKENQVLAGL----EQAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHTC----TTSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCcEEEcccccCHHHHHHH-HcCCEEEEEECCHHHHHHHHHHHHHcCC----CccceEEEECcHHHHHHHHHhcCCCce
Confidence 46799999999999999999 4556999999999999999999864210 111489999999876431 35899
Q ss_pred hhhhhhHHhhcC--------chhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLT--------DDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hlt--------D~el~~~l~~~~~~LkPG 262 (262)
+|+++.+..... ..+...+++.+.++|+||
T Consensus 228 ~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lkpg 265 (332)
T 2igt_A 228 IILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPK 265 (332)
T ss_dssp EEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTT
T ss_pred EEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcC
Confidence 999975421111 123458999999999997
No 193
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.17 E-value=1.6e-11 Score=104.91 Aligned_cols=98 Identities=15% Similarity=0.081 Sum_probs=73.9
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.++.+|||+|||+|..+..|+.... .+|+++|+|+.+++.|++++...... .....++.++.+|+.+..+..++||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPT-LLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTH-HHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc-ccCCCcEEEEECCcccCcccCCCcCE
Confidence 3578999999999999999995433 48999999999999999987542100 00023689999998765444468999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++..+++|+. +++.+.|+||
T Consensus 155 i~~~~~~~~~~--------~~~~~~Lkpg 175 (226)
T 1i1n_A 155 IHVGAAAPVVP--------QALIDQLKPG 175 (226)
T ss_dssp EEECSBBSSCC--------HHHHHTEEEE
T ss_pred EEECCchHHHH--------HHHHHhcCCC
Confidence 99988776654 4677888885
No 194
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.17 E-value=2.2e-11 Score=107.13 Aligned_cols=96 Identities=13% Similarity=0.127 Sum_probs=75.6
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-------C
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------E 227 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-------~ 227 (262)
++.+|||+|||+|..+..|+... ..+|+++|+|+.|++.|++++..+. ...+++++.+|..++.+ .
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g-----~~~~i~~~~gda~~~l~~l~~~~~~ 153 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG-----VDHKIDFREGPALPVLDEMIKDEKN 153 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT-----CGGGEEEEESCHHHHHHHHHHSGGG
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCCeEEEECCHHHHHHHHHhccCC
Confidence 46799999999999999999543 4589999999999999999986531 22478999999876522 1
Q ss_pred CCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 228 ~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.++||+|++... ......+++.+.++|+||
T Consensus 154 ~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpG 183 (247)
T 1sui_A 154 HGSYDFIFVDAD-----KDNYLNYHKRLIDLVKVG 183 (247)
T ss_dssp TTCBSEEEECSC-----STTHHHHHHHHHHHBCTT
T ss_pred CCCEEEEEEcCc-----hHHHHHHHHHHHHhCCCC
Confidence 368999998643 223458999999999997
No 195
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.17 E-value=3e-12 Score=112.33 Aligned_cols=107 Identities=13% Similarity=0.156 Sum_probs=81.0
Q ss_pred HHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEE
Q 024811 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF 216 (262)
Q Consensus 139 ~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f 216 (262)
..+|..++.. .++.+|||+|||+|..+..|+... ..+|++||+|+.|++.|++++..+. ...++++
T Consensus 49 ~~~l~~l~~~-------~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-----~~~~i~~ 116 (242)
T 3r3h_A 49 AQFMQMLIRL-------TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK-----QEHKIKL 116 (242)
T ss_dssp HHHHHHHHHH-------HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT-----CTTTEEE
T ss_pred HHHHHHHHhh-------cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEE
Confidence 4556555431 146799999999999999999432 3589999999999999999986531 2247999
Q ss_pred EEcCCCCCCCC------CCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 217 FCVPLQDFTPE------TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 217 ~~~d~~~~~~~------~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+|+.++.+. .++||+|++... ......+++++.++|+||
T Consensus 117 ~~gda~~~l~~~~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpG 163 (242)
T 3r3h_A 117 RLGPALDTLHSLLNEGGEHQFDFIFIDAD-----KTNYLNYYELALKLVTPK 163 (242)
T ss_dssp EESCHHHHHHHHHHHHCSSCEEEEEEESC-----GGGHHHHHHHHHHHEEEE
T ss_pred EEcCHHHHHHHHhhccCCCCEeEEEEcCC-----hHHhHHHHHHHHHhcCCC
Confidence 99998775332 368999998643 234457999999999997
No 196
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.16 E-value=1.6e-11 Score=113.36 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=75.7
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC--CCCCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~--~~~~~yD 232 (262)
.+.+|||||||+|.++..|+ +. ..+|++||+|+.|++.|++++...... -...+++++.+|+.++. ...++||
T Consensus 120 ~~~~VLdIG~G~G~~a~~la-~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~g--l~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVA-RHASIEQIDMCEIDKMVVDVSKQFFPDVAIG--YEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHT-TCTTCCEEEEEESCHHHHHHHHHHCHHHHGG--GGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCEEEEECCCccHHHHHHH-HcCCCCEEEEEECCHHHHHHHHHHHHhhccc--cCCCcEEEEECCHHHHHHhccCCCcc
Confidence 46799999999999999999 54 468999999999999999987531000 01247899999987652 1236899
Q ss_pred hhhhhhH--HhhcCchhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWC--IGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~v--l~hltD~el~~~l~~~~~~LkPG 262 (262)
+|++... +++..+.....+++.+.++|+||
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg 228 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPG 228 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCC
Confidence 9998753 22211111248999999999986
No 197
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=1.9e-11 Score=112.38 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=75.1
Q ss_pred ceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC--CCCCccchhh
Q 024811 159 LVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDVIW 235 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~--~~~~~yDlI~ 235 (262)
.+|||||||+|.++..|++.+ ..+|++||+++.|++.|++++... ...+++++.+|..++. ...++||+|+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~------~~~rv~v~~~Da~~~l~~~~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP------RAPRVKIRVDDARMVAESFTPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC------CTTTEEEEESCHHHHHHTCCTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc------CCCceEEEECcHHHHHhhccCCCCCEEE
Confidence 489999999999999999533 448999999999999999998532 2357999999987762 2236899999
Q ss_pred hhhHHhhcCchhH--HHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDF--VSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el--~~~l~~~~~~LkPG 262 (262)
+....+.-....+ .+|++.|+++|+||
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~Lkpg 193 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRGLAPG 193 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHHEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCC
Confidence 8743332222211 37999999999986
No 198
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.15 E-value=1.8e-11 Score=106.05 Aligned_cols=96 Identities=5% Similarity=0.022 Sum_probs=74.4
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--------
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-------- 226 (262)
++.+|||+|||+|..+..|+... ..+|+++|+++.+++.|++++.... ...+++++.+|+.+..+
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-----~~~~v~~~~~d~~~~~~~~~~~~~~ 134 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG-----LENKIFLKLGSALETLQVLIDSKSA 134 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-----CGGGEEEEESCHHHHHHHHHHCSSC
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCCEEEEECCHHHHHHHHHhhccc
Confidence 46799999999999999999543 4689999999999999999985431 12358999998765311
Q ss_pred -------C-C-CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 227 -------E-T-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 227 -------~-~-~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+ . ++||+|++... .+....+|+++.+.|+||
T Consensus 135 ~~~~~~f~~~~~~fD~I~~~~~-----~~~~~~~l~~~~~~L~pg 174 (239)
T 2hnk_A 135 PSWASDFAFGPSSIDLFFLDAD-----KENYPNYYPLILKLLKPG 174 (239)
T ss_dssp CGGGTTTCCSTTCEEEEEECSC-----GGGHHHHHHHHHHHEEEE
T ss_pred ccccccccCCCCCcCEEEEeCC-----HHHHHHHHHHHHHHcCCC
Confidence 1 1 58999998753 233448999999999986
No 199
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.15 E-value=7.3e-11 Score=106.10 Aligned_cols=99 Identities=12% Similarity=0.022 Sum_probs=74.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCcc---ch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY---DV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~y---Dl 233 (262)
++.+|||+|||+|.++..|+.....+|+++|+|+.+++.|++++.... ...+++|+++|+.+..+ ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~-----l~~~v~~~~~D~~~~~~--~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHG-----VSDRFFVRKGEFLEPFK--EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTT-----CTTSEEEEESSTTGGGG--GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCceEEEECcchhhcc--cccCCCCE
Confidence 356899999999999999994425689999999999999999986421 11248999999987533 479 99
Q ss_pred hhhhhHHh-----------hcCch------hHHHHHHHHH-hhccCC
Q 024811 234 IWVQWCIG-----------HLTDD------DFVSFFKRAK-VNHSQT 262 (262)
Q Consensus 234 I~s~~vl~-----------hltD~------el~~~l~~~~-~~LkPG 262 (262)
|+|+.+.. |-+.. +-..+++++. +.|+||
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pg 242 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSG 242 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTT
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCC
Confidence 99984321 21111 1127899999 999986
No 200
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.14 E-value=3.1e-11 Score=105.45 Aligned_cols=90 Identities=9% Similarity=-0.076 Sum_probs=70.8
Q ss_pred CCceeeEeeccccHHHHHHHHh-----cCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC---CC-C
Q 024811 157 QHLVALDCGSGIGRITKNLLIR-----YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TP-E 227 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~-----~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~---~~-~ 227 (262)
++.+|||||||+|..+..|+.. ...+|++||+|+.|++.|+. + ..+++|+++|+.++ +. .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-~----------~~~v~~~~gD~~~~~~l~~~~ 149 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-D----------MENITLHQGDCSDLTTFEHLR 149 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-G----------CTTEEEEECCSSCSGGGGGGS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-c----------CCceEEEECcchhHHHHHhhc
Confidence 3579999999999999999944 14689999999999988872 1 13789999999885 32 2
Q ss_pred CCccchhhhhhHHhhcCchhHHHHHHHHHh-hccCC
Q 024811 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKV-NHSQT 262 (262)
Q Consensus 228 ~~~yDlI~s~~vl~hltD~el~~~l~~~~~-~LkPG 262 (262)
..+||+|++... |. +...+|.++.+ .|+||
T Consensus 150 ~~~fD~I~~d~~--~~---~~~~~l~~~~r~~LkpG 180 (236)
T 2bm8_A 150 EMAHPLIFIDNA--HA---NTFNIMKWAVDHLLEEG 180 (236)
T ss_dssp SSCSSEEEEESS--CS---SHHHHHHHHHHHTCCTT
T ss_pred cCCCCEEEECCc--hH---hHHHHHHHHHHhhCCCC
Confidence 237999998654 42 34589999997 99997
No 201
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.13 E-value=1.9e-11 Score=111.21 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=73.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-CCCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-~~~~~yDl 233 (262)
.+.+|||||||+|.++..++ +.. .+|++||+++.|++.|++++...... -...+++++.+|..++. ...++||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~-~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~--~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVV-KHPSVESVVQCEIDEDVIQVSKKFLPGMAIG--YSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHT-TCTTCCEEEEEESCHHHHHHHHHHCHHHHGG--GGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred CCCEEEEECCCchHHHHHHH-HcCCCCEEEEEECCHHHHHHHHHHhHHhhcc--cCCCcEEEEECcHHHHHhhCCCCceE
Confidence 46799999999999999999 543 68999999999999999987531000 01247899999987642 22368999
Q ss_pred hhhhhHHhhcCchh--HHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDD--FVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~e--l~~~l~~~~~~LkPG 262 (262)
|++....+.-+... ..++++++.++|+||
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg 202 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKED 202 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCC
Confidence 99875433222211 137999999999986
No 202
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.13 E-value=9.1e-12 Score=111.68 Aligned_cols=105 Identities=13% Similarity=0.115 Sum_probs=74.4
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccC-----CCCCcceEEEEcCCCCCCCCCCcc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMA-----PDMHKATNFFCVPLQDFTPETGRY 231 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~-----~~~~~~v~f~~~d~~~~~~~~~~y 231 (262)
.+.+|||+|||+|.++..+++....+|++||+++.+++.|++++ ...... +....+++++.+|..++....++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 46799999999999999999442458999999999999999987 320000 001357899999986642113689
Q ss_pred chhhhhhHHhhcCchhH--HHHHHHHHhhccCC
Q 024811 232 DVIWVQWCIGHLTDDDF--VSFFKRAKVNHSQT 262 (262)
Q Consensus 232 DlI~s~~vl~hltD~el--~~~l~~~~~~LkPG 262 (262)
|+|++....+.-+...+ .++++.+.+.|+||
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg 186 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP 186 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC
Confidence 99998764322122222 47999999999986
No 203
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.13 E-value=1.3e-11 Score=110.84 Aligned_cols=104 Identities=18% Similarity=0.180 Sum_probs=77.5
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~yDlI 234 (262)
++.+|||+|||+|.++..+++.. ..+|++||+++.+++.|++++...... -..++++++.+|+.++.. ..++||+|
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCG--YEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGG--GGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccc--cCCCcEEEEECChHHHHHhCCCCceEE
Confidence 46799999999999999999332 468999999999999999987532100 013578999999877532 13689999
Q ss_pred hhhhHHhhcCchhH--HHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDF--VSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el--~~~l~~~~~~LkPG 262 (262)
++....++.+...+ .++++.+++.|+||
T Consensus 156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pg 185 (283)
T 2i7c_A 156 IVDSSDPIGPAETLFNQNFYEKIYNALKPN 185 (283)
T ss_dssp EEECCCTTTGGGGGSSHHHHHHHHHHEEEE
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHHhcCCC
Confidence 99654333333333 48999999999986
No 204
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.12 E-value=4.5e-11 Score=105.87 Aligned_cols=94 Identities=13% Similarity=0.110 Sum_probs=76.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++.... ...+++++.+|+.+..+ .++||+
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~v~~~~~d~~~~~~-~~~~D~ 184 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG-----LIERVTIKVRDISEGFD-EKDVDA 184 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT-----CGGGEEEECCCGGGCCS-CCSEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-----CCCCEEEEECCHHHccc-CCccCE
Confidence 357799999999999999999553 4589999999999999999875421 12478999999987733 368999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+++ .+++. .+++++.++|+||
T Consensus 185 V~~~-----~~~~~--~~l~~~~~~L~pg 206 (277)
T 1o54_A 185 LFLD-----VPDPW--NYIDKCWEALKGG 206 (277)
T ss_dssp EEEC-----CSCGG--GTHHHHHHHEEEE
T ss_pred EEEC-----CcCHH--HHHHHHHHHcCCC
Confidence 9983 45665 8999999999986
No 205
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.12 E-value=7.6e-11 Score=109.58 Aligned_cols=96 Identities=8% Similarity=0.058 Sum_probs=76.9
Q ss_pred CCceeeEeeccccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCC-CCC-CCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTP-ETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~-~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~-~~~-~~~~yDl 233 (262)
++.+|||+| |+|.++..++.... .+|+++|+|+.|++.|++++... ...+++|+++|+.+ ++. ..++||+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~------g~~~v~~~~~D~~~~l~~~~~~~fD~ 244 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI------GYEDIEIFTFDLRKPLPDYALHKFDT 244 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH------TCCCEEEECCCTTSCCCTTTSSCBSE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCEEEEEChhhhhchhhccCCccE
Confidence 467999999 99999999994432 58999999999999999998643 12268999999998 532 2358999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+++.++++.. ...+++++.++|+||
T Consensus 245 Vi~~~p~~~~~---~~~~l~~~~~~Lkpg 270 (373)
T 2qm3_A 245 FITDPPETLEA---IRAFVGRGIATLKGP 270 (373)
T ss_dssp EEECCCSSHHH---HHHHHHHHHHTBCST
T ss_pred EEECCCCchHH---HHHHHHHHHHHcccC
Confidence 99997655442 358999999999996
No 206
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.12 E-value=1.3e-11 Score=108.11 Aligned_cols=93 Identities=17% Similarity=0.045 Sum_probs=64.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEE-cCCCCCCCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~-~d~~~~~~~~~~yDlI~ 235 (262)
.+.+|||+|||||.++..|+.....+|++||+|+.|++.|+++....... ...++.+.. .++....++...||+++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~D~v~ 113 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVM---EQFNFRNAVLADFEQGRPSFTSIDVSF 113 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEE---CSCCGGGCCGGGCCSCCCSEEEECCSS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcccccc---ccceEEEeCHhHcCcCCCCEEEEEEEh
Confidence 35699999999999999999443359999999999999988764321000 011233333 33332112335788887
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++. . .+|.++.++|+||
T Consensus 114 ~~l--------~--~~l~~i~rvLkpg 130 (232)
T 3opn_A 114 ISL--------D--LILPPLYEILEKN 130 (232)
T ss_dssp SCG--------G--GTHHHHHHHSCTT
T ss_pred hhH--------H--HHHHHHHHhccCC
Confidence 764 3 7999999999997
No 207
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.12 E-value=5.8e-11 Score=107.49 Aligned_cols=87 Identities=14% Similarity=0.140 Sum_probs=65.3
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||+|||+|.+|..|+ +.+.+|++||+|+.|++.|++++... ...+++++++|+.++++ .+||+|+
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La-~~~~~v~~vDi~~~~~~~a~~~~~~~------~~~~v~~~~~D~~~~~~--~~~D~Vv 111 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLL-PLAKKVITIDIDSRMISEVKKRCLYE------GYNNLEVYEGDAIKTVF--PKFDVCT 111 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHT-TTSSEEEEECSCHHHHHHHHHHHHHT------TCCCEEC----CCSSCC--CCCSEEE
T ss_pred CCcCEEEEEcCcCcHHHHHHH-hcCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEECchhhCCc--ccCCEEE
Confidence 357799999999999999999 66789999999999999999987532 12478999999998865 3899999
Q ss_pred hhhHHhhcCchhHHHHH
Q 024811 236 VQWCIGHLTDDDFVSFF 252 (262)
Q Consensus 236 s~~vl~hltD~el~~~l 252 (262)
++.+.+ .+.+.+..++
T Consensus 112 ~n~py~-~~~~~~~~ll 127 (299)
T 2h1r_A 112 ANIPYK-ISSPLIFKLI 127 (299)
T ss_dssp EECCGG-GHHHHHHHHH
T ss_pred EcCCcc-cccHHHHHHH
Confidence 986643 4445444555
No 208
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.12 E-value=1.6e-11 Score=111.86 Aligned_cols=105 Identities=12% Similarity=0.153 Sum_probs=76.9
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-CCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-~~~~~yDlI 234 (262)
.+.+|||||||+|.++..+++.. ..+|++||+++.|++.|++++..... ..-...+++++.+|+.++. ...++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~-~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQ-GAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc-ccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 46799999999999999999432 46899999999999999998753100 0001347899999987752 123689999
Q ss_pred hhhhHHhh---cCchh--HHHHHHHHHhhccCC
Q 024811 235 WVQWCIGH---LTDDD--FVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~h---ltD~e--l~~~l~~~~~~LkPG 262 (262)
++....++ -+... ..++++.++++|+||
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkpg 188 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG 188 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCC
Confidence 99865433 11111 248999999999986
No 209
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.12 E-value=2.3e-11 Score=103.99 Aligned_cols=96 Identities=18% Similarity=0.135 Sum_probs=74.4
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC---C---
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---T--- 228 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~---~--- 228 (262)
++.+|||+|||+|..+..++... ..+|+++|+|+.+++.|++++.... ...+++++.+|+.++.+. .
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-----~~~~i~~~~~d~~~~~~~~~~~~~~ 143 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE-----AEHKIDLRLKPALETLDELLAAGEA 143 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT-----CTTTEEEEESCHHHHHHHHHHTTCT
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-----CCCeEEEEEcCHHHHHHHHHhcCCC
Confidence 46799999999999999999432 4589999999999999999986431 124789999988654211 1
Q ss_pred CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++||+|++... ......+++.+.++|+||
T Consensus 144 ~~~D~v~~d~~-----~~~~~~~l~~~~~~L~pg 172 (229)
T 2avd_A 144 GTFDVAVVDAD-----KENCSAYYERCLQLLRPG 172 (229)
T ss_dssp TCEEEEEECSC-----STTHHHHHHHHHHHEEEE
T ss_pred CCccEEEECCC-----HHHHHHHHHHHHHHcCCC
Confidence 58999998643 333458999999999986
No 210
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.11 E-value=6.4e-11 Score=107.89 Aligned_cols=101 Identities=13% Similarity=0.034 Sum_probs=76.1
Q ss_pred CCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.++.+|||+|||+|..|..|+... ..+|+++|+|+.+++.+++++... ...++.++++|+.++....++||+
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~------g~~~v~~~~~D~~~~~~~~~~fD~ 190 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL------GVLNVILFHSSSLHIGELNVEFDK 190 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH------TCCSEEEESSCGGGGGGGCCCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh------CCCeEEEEECChhhcccccccCCE
Confidence 357899999999999999999543 247999999999999999998643 223689999999887543468999
Q ss_pred hhhhhH------HhhcCc-------hh-------HHHHHHHHHhhccCC
Q 024811 234 IWVQWC------IGHLTD-------DD-------FVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~v------l~hltD-------~e-------l~~~l~~~~~~LkPG 262 (262)
|++..+ +++.++ .+ ...+|+++.++|+||
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG 239 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG 239 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 998522 222221 11 147999999999986
No 211
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.11 E-value=2.3e-11 Score=108.96 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=76.5
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-CCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-~~~~~yDlI 234 (262)
.+.+|||||||+|.++..+++.. ..+|++||+++.|++.|++++..... ....++++++.+|..++- ...++||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~--~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAG--KLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHT--TTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcc--ccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 46799999999999999999432 46899999999999999998743100 012357999999987652 223689999
Q ss_pred hhhhHHhhcCchh--HHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDD--FVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~e--l~~~l~~~~~~LkPG 262 (262)
++....++.+... ..+|++.+++.|+||
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pg 182 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKED 182 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCC
Confidence 9975433222211 137999999999986
No 212
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.10 E-value=5.7e-11 Score=103.55 Aligned_cols=96 Identities=9% Similarity=0.058 Sum_probs=75.4
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-------C
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------E 227 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-------~ 227 (262)
++.+|||+|||+|..+..++... ..+|+++|+|+.+++.|++++..+. ...+++++.+|..++.+ .
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-----~~~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG-----VEHKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-----CGGGEEEEESCHHHHHHHHHHSTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEEcCHHHHHHHHHhccCC
Confidence 46799999999999999999543 4689999999999999999986531 22468999999876522 1
Q ss_pred CCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 228 ~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.++||+|++... ......+++.+.++|+||
T Consensus 145 ~~~fD~I~~d~~-----~~~~~~~l~~~~~~L~pG 174 (237)
T 3c3y_A 145 EGSYDFGFVDAD-----KPNYIKYHERLMKLVKVG 174 (237)
T ss_dssp TTCEEEEEECSC-----GGGHHHHHHHHHHHEEEE
T ss_pred CCCcCEEEECCc-----hHHHHHHHHHHHHhcCCC
Confidence 368999997632 234458999999999986
No 213
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.10 E-value=5.8e-11 Score=108.23 Aligned_cols=100 Identities=14% Similarity=0.094 Sum_probs=73.2
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhccccc----cc-CCCCCcceEEEEcCCCCCC--C
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPEN----HM-APDMHKATNFFCVPLQDFT--P 226 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~----~~-~~~~~~~v~f~~~d~~~~~--~ 226 (262)
.++.+|||+|||+|.++..|+...+ .+|+++|+++.+++.|++++.... -+ ......+++++.+|+.+.. .
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 3578999999999999999995433 689999999999999999876321 00 0001247899999998863 2
Q ss_pred CCCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 227 ~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.++||+|+++ +.++. .++.++.++|+||
T Consensus 184 ~~~~fD~V~~~-----~~~~~--~~l~~~~~~Lkpg 212 (336)
T 2b25_A 184 KSLTFDAVALD-----MLNPH--VTLPVFYPHLKHG 212 (336)
T ss_dssp ----EEEEEEC-----SSSTT--TTHHHHGGGEEEE
T ss_pred CCCCeeEEEEC-----CCCHH--HHHHHHHHhcCCC
Confidence 34589999984 34454 5889999999986
No 214
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.10 E-value=8.9e-11 Score=106.73 Aligned_cols=76 Identities=13% Similarity=0.084 Sum_probs=65.4
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.++.+|||||||+|.+|..|+ +.+.+|++||.++.|++.+++++.. ..+++++++|+.+++++..+||+|+
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La-~~~~~V~aVEid~~li~~a~~~~~~--------~~~v~vi~gD~l~~~~~~~~fD~Iv 119 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELA-KNAKKVYVIEIDKSLEPYANKLKEL--------YNNIEIIWGDALKVDLNKLDFNKVV 119 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHH-HHSSEEEEEESCGGGHHHHHHHHHH--------CSSEEEEESCTTTSCGGGSCCSEEE
T ss_pred CCcCEEEEECCCchHHHHHHH-hcCCEEEEEECCHHHHHHHHHHhcc--------CCCeEEEECchhhCCcccCCccEEE
Confidence 457799999999999999999 5578999999999999999998752 2478999999999876656799999
Q ss_pred hhhHH
Q 024811 236 VQWCI 240 (262)
Q Consensus 236 s~~vl 240 (262)
++.+.
T Consensus 120 ~NlPy 124 (295)
T 3gru_A 120 ANLPY 124 (295)
T ss_dssp EECCG
T ss_pred EeCcc
Confidence 98653
No 215
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.10 E-value=4.4e-11 Score=108.94 Aligned_cols=95 Identities=9% Similarity=0.006 Sum_probs=67.8
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeC----CHHHHHHHHhhcccccccCCCCCcceEEEEc-CCCCCCCCCCc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEP----VSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGR 230 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~----s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~-d~~~~~~~~~~ 230 (262)
.++.+|||+|||||.+|..++ +. .+|.+||. ++.+++.++ .. .....++.|+++ |+.++++ ++
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la-~~-~~V~gvD~~~~~~~~~~~~~~--~~------~~~~~~v~~~~~~D~~~l~~--~~ 148 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCG-GL-KNVREVKGLTKGGPGHEEPIP--MS------TYGWNLVRLQSGVDVFFIPP--ER 148 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHH-TS-TTEEEEEEECCCSTTSCCCCC--CC------STTGGGEEEECSCCTTTSCC--CC
T ss_pred CCCCEEEEEcCCCCHHHHHHH-hc-CCEEEEeccccCchhHHHHHH--hh------hcCCCCeEEEeccccccCCc--CC
Confidence 457899999999999999999 54 57999999 565542111 10 011247899998 8887743 58
Q ss_pred cchhhhhhHH---hhcCchh-HHHHHHHHHhhccCC
Q 024811 231 YDVIWVQWCI---GHLTDDD-FVSFFKRAKVNHSQT 262 (262)
Q Consensus 231 yDlI~s~~vl---~hltD~e-l~~~l~~~~~~LkPG 262 (262)
||+|+|..++ ++..|.. ...+|..+.++|+||
T Consensus 149 fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpG 184 (305)
T 2p41_A 149 CDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNN 184 (305)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTT
T ss_pred CCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCC
Confidence 9999998664 3333332 225889999999997
No 216
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.10 E-value=3.2e-11 Score=104.56 Aligned_cols=96 Identities=7% Similarity=0.060 Sum_probs=73.8
Q ss_pred CCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC----CCC--
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PET-- 228 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~----~~~-- 228 (262)
++.+|||+|||+|..+..|+... ..+|+++|+|+.+++.|++++..+. ...+++++.+|+.++. ...
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-----~~~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG-----VAEKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-----CGGGEEEEESCHHHHHHHHHTSSSC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEEcCHHHHHHHHHhcCCC
Confidence 36699999999999999999433 3489999999999999999876431 1246899999975531 112
Q ss_pred CccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++||+|++... ..+...+++++.++|+||
T Consensus 147 ~~fD~V~~d~~-----~~~~~~~l~~~~~~Lkpg 175 (232)
T 3cbg_A 147 PEFDLIFIDAD-----KRNYPRYYEIGLNLLRRG 175 (232)
T ss_dssp CCEEEEEECSC-----GGGHHHHHHHHHHTEEEE
T ss_pred CCcCEEEECCC-----HHHHHHHHHHHHHHcCCC
Confidence 58999997643 234458999999999986
No 217
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.09 E-value=2.5e-11 Score=111.02 Aligned_cols=104 Identities=18% Similarity=0.203 Sum_probs=72.9
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-CCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-~~~~~yDlI 234 (262)
.+.+|||||||+|.++..+++.. ..+|++||+|+.+++.|++++...... -...+++++.+|+.++. ...++||+|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~--~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCG--FSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGG--GGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccc--cCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 45799999999999999999432 468999999999999999988532000 01347899999987652 123689999
Q ss_pred hhhhHHhhcCchhH--HHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDF--VSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el--~~~l~~~~~~LkPG 262 (262)
++...-+.-++..+ .++++.++++|+||
T Consensus 186 i~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg 215 (314)
T 2b2c_A 186 ITDSSDPVGPAESLFGQSYYELLRDALKED 215 (314)
T ss_dssp EECCC-------------HHHHHHHHEEEE
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHhhcCCC
Confidence 98764222222222 48999999999986
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.08 E-value=3.4e-11 Score=110.32 Aligned_cols=103 Identities=18% Similarity=0.228 Sum_probs=75.5
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~yDlI 234 (262)
.+.+|||+|||+|.++..+++.. ..+|++||+|+.+++.|++++..... .-...+++++.+|+.++.+ ..++||+|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~--~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISC--GYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSG--GGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcc--ccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 45799999999999999999432 46899999999999999998753100 0013478999999876521 23689999
Q ss_pred hhhhHHhhcC-chhH--HHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLT-DDDF--VSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hlt-D~el--~~~l~~~~~~LkPG 262 (262)
++... .++. ...+ .++++.+.+.|+||
T Consensus 194 i~d~~-~p~~~~~~l~~~~~l~~~~~~Lkpg 223 (321)
T 2pt6_A 194 IVDSS-DPIGPAETLFNQNFYEKIYNALKPN 223 (321)
T ss_dssp EEECC-CSSSGGGGGSSHHHHHHHHHHEEEE
T ss_pred EECCc-CCCCcchhhhHHHHHHHHHHhcCCC
Confidence 98753 1221 1222 48999999999986
No 219
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.08 E-value=6.7e-11 Score=110.15 Aligned_cols=97 Identities=16% Similarity=0.071 Sum_probs=75.8
Q ss_pred CCceeeEeeccccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~--~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
++.+|||+|||+|.++..++ ..+. +|+++|+|+.|++.|++++..+. ...+++|+++|+.++++..++||+|
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a-~~~~~~~v~g~Dis~~~l~~A~~n~~~~g-----l~~~i~~~~~D~~~~~~~~~~fD~I 290 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELA-LRRYSGEIIGIEKYRKHLIGAEMNALAAG-----VLDKIKFIQGDATQLSQYVDSVDFA 290 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHH-HTTCCSCEEEEESCHHHHHHHHHHHHHTT-----CGGGCEEEECCGGGGGGTCSCEEEE
T ss_pred CCCEEEEccCcCcHHHHHHH-HhCCCCeEEEEeCCHHHHHHHHHHHHHcC-----CCCceEEEECChhhCCcccCCcCEE
Confidence 46789999999999999999 5565 89999999999999999986531 1247899999999987655789999
Q ss_pred hhhhHHhhcC----c-hhH-HHHHHHHHhhc
Q 024811 235 WVQWCIGHLT----D-DDF-VSFFKRAKVNH 259 (262)
Q Consensus 235 ~s~~vl~hlt----D-~el-~~~l~~~~~~L 259 (262)
+++.+++.-. . +++ ..+++.++++|
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc
Confidence 9987654322 1 122 46788888876
No 220
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.08 E-value=1.1e-10 Score=103.59 Aligned_cols=95 Identities=11% Similarity=-0.066 Sum_probs=80.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..+. ...+|.++|+++.|++.+++++... +.+.+|..+|...-+++ ++||+|++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~-------g~~~~~~v~D~~~~~~~-~~~DvvLl 174 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREK-------DWDFTFALQDVLCAPPA-EAGDLALI 174 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHT-------TCEEEEEECCTTTSCCC-CBCSEEEE
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhc-------CCCceEEEeecccCCCC-CCcchHHH
Confidence 47799999999999999988 4568999999999999999997542 35788999999887665 69999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.-++|||.+.+-...+ ++.+.|+++
T Consensus 175 lk~lh~LE~q~~~~~~-~ll~aL~~~ 199 (253)
T 3frh_A 175 FKLLPLLEREQAGSAM-ALLQSLNTP 199 (253)
T ss_dssp ESCHHHHHHHSTTHHH-HHHHHCBCS
T ss_pred HHHHHHhhhhchhhHH-HHHHHhcCC
Confidence 9999999987755666 777777764
No 221
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.08 E-value=6.5e-11 Score=99.02 Aligned_cols=90 Identities=13% Similarity=0.048 Sum_probs=67.2
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC---CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-------
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~---~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~------- 225 (262)
.++.+|||+|||+|.++..|+.... .+|+++|+|+.. . ..++.++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~---------~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------P---------IPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------C---------CTTCEEEECCTTTTSSCCC---
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------C---------CCCceEEEccccchhhhhhccc
Confidence 3567999999999999999995542 579999999831 0 135789999998765
Q ss_pred ------------------CCCCccchhhhhhHHhhcC----chh-----HHHHHHHHHhhccCC
Q 024811 226 ------------------PETGRYDVIWVQWCIGHLT----DDD-----FVSFFKRAKVNHSQT 262 (262)
Q Consensus 226 ------------------~~~~~yDlI~s~~vl~hlt----D~e-----l~~~l~~~~~~LkPG 262 (262)
.+.++||+|+|+.++++.. |.. ...+++++.++|+||
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg 147 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIG 147 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCC
Confidence 2346899999987766542 221 124889999999996
No 222
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.08 E-value=2.6e-11 Score=110.16 Aligned_cols=91 Identities=11% Similarity=0.032 Sum_probs=64.9
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC---CCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~---~~~~yDl 233 (262)
++.+|||+|||||.+|..|+.....+|++||+|+.|++.+.++-.. ...+...++..+.+ +..+||+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~r----------v~~~~~~ni~~l~~~~l~~~~fD~ 154 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDR----------VRSMEQYNFRYAEPVDFTEGLPSF 154 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTT----------EEEECSCCGGGCCGGGCTTCCCSE
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcc----------cceecccCceecchhhCCCCCCCE
Confidence 4569999999999999999944346899999999999986543211 11121223322221 1235999
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|++..+++++ . .+|.++.++|+||
T Consensus 155 v~~d~sf~sl---~--~vL~e~~rvLkpG 178 (291)
T 3hp7_A 155 ASIDVSFISL---N--LILPALAKILVDG 178 (291)
T ss_dssp EEECCSSSCG---G--GTHHHHHHHSCTT
T ss_pred EEEEeeHhhH---H--HHHHHHHHHcCcC
Confidence 9998888766 3 7999999999997
No 223
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.07 E-value=1.4e-10 Score=101.94 Aligned_cols=72 Identities=22% Similarity=0.306 Sum_probs=58.3
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC-Cccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~-~~yDlI 234 (262)
.++.+|||+|||+|.+|..|+ +.+.+|++||+|+.|++.+++++.. ..+++++++|+.+++++. ..|+ |
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~-~~~~~v~~vD~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~~~-v 98 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELV-QRCNFVTAIEIDHKLCKTTENKLVD--------HDNFQVLNKDILQFKFPKNQSYK-I 98 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHH-HHSSEEEEECSCHHHHHHHHHHTTT--------CCSEEEECCCGGGCCCCSSCCCE-E
T ss_pred CCCCEEEEEeCCchHHHHHHH-HcCCeEEEEECCHHHHHHHHHhhcc--------CCCeEEEEChHHhCCcccCCCeE-E
Confidence 357799999999999999999 5568999999999999999998742 247899999999886542 3553 4
Q ss_pred hhh
Q 024811 235 WVQ 237 (262)
Q Consensus 235 ~s~ 237 (262)
+++
T Consensus 99 v~n 101 (244)
T 1qam_A 99 FGN 101 (244)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 224
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.06 E-value=1.1e-10 Score=104.73 Aligned_cols=97 Identities=9% Similarity=-0.070 Sum_probs=81.7
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.+.+|||+|||+|-++..++... ..+|.++|+++.|++.+++++... +...++...|+..-.++ ++||+|+
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~-------g~~~~~~v~D~~~~~p~-~~~DvaL 203 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL-------NVPHRTNVADLLEDRLD-EPADVTL 203 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT-------TCCEEEEECCTTTSCCC-SCCSEEE
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc-------CCCceEEEeeecccCCC-CCcchHH
Confidence 46799999999999999998332 348999999999999999998652 23578889998876664 7999999
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++-+++||.+.+....+ ++.+.|+||
T Consensus 204 ~lkti~~Le~q~kg~g~-~ll~aL~~~ 229 (281)
T 3lcv_B 204 LLKTLPCLETQQRGSGW-EVIDIVNSP 229 (281)
T ss_dssp ETTCHHHHHHHSTTHHH-HHHHHSSCS
T ss_pred HHHHHHHhhhhhhHHHH-HHHHHhCCC
Confidence 99999999998866777 899998885
No 225
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.05 E-value=3e-10 Score=99.90 Aligned_cols=96 Identities=10% Similarity=-0.069 Sum_probs=68.5
Q ss_pred cCCCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC---CC
Q 024811 154 RNNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ET 228 (262)
Q Consensus 154 ~~~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~---~~ 228 (262)
++.++.+|||+|||||..+..++.... .+|.++|.|+.|++...+.... ..++.++++|+..... ..
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--------r~nv~~i~~Da~~~~~~~~~~ 144 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--------RPNIFPLLADARFPQSYKSVV 144 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--------CTTEEEEECCTTCGGGTTTTC
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--------cCCeEEEEcccccchhhhccc
Confidence 355789999999999999999994433 3899999999997655443221 1378999999876421 13
Q ss_pred CccchhhhhhHHhhcCchhHHH-HHHHHHhhccCC
Q 024811 229 GRYDVIWVQWCIGHLTDDDFVS-FFKRAKVNHSQT 262 (262)
Q Consensus 229 ~~yDlI~s~~vl~hltD~el~~-~l~~~~~~LkPG 262 (262)
++||+|++..+. ++..+ ++..+.+.||||
T Consensus 145 ~~~D~I~~d~a~-----~~~~~il~~~~~~~LkpG 174 (232)
T 3id6_C 145 ENVDVLYVDIAQ-----PDQTDIAIYNAKFFLKVN 174 (232)
T ss_dssp CCEEEEEECCCC-----TTHHHHHHHHHHHHEEEE
T ss_pred cceEEEEecCCC-----hhHHHHHHHHHHHhCCCC
Confidence 589999988542 33334 456667799986
No 226
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.05 E-value=8.7e-11 Score=106.20 Aligned_cols=104 Identities=14% Similarity=0.086 Sum_probs=73.4
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC-CCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~-~~~~~yDlI 234 (262)
.+.+|||+|||+|.++..+++.. ..+|++||+|+.+++.|++++...... ....+++++.+|+.++. ...++||+|
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCG--FDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGG--GGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccc--cCCCceEEEECcHHHHHhhCCCCceEE
Confidence 35799999999999999999432 468999999999999999987431000 01247899999987642 223689999
Q ss_pred hhhhHHhhcCch---hHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDD---DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~---el~~~l~~~~~~LkPG 262 (262)
++...-+++... ...++++.+++.|+||
T Consensus 168 i~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg 198 (296)
T 1inl_A 168 IIDSTDPTAGQGGHLFTEEFYQACYDALKED 198 (296)
T ss_dssp EEEC----------CCSHHHHHHHHHHEEEE
T ss_pred EEcCCCcccCchhhhhHHHHHHHHHHhcCCC
Confidence 986432212211 1147999999999986
No 227
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.03 E-value=1.3e-10 Score=103.43 Aligned_cols=101 Identities=10% Similarity=-0.026 Sum_probs=76.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-C-CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC----CCC
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETG 229 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~-~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~----~~~ 229 (262)
.++.+|||+|||+|..|..|+... . .+|+++|.|+.+++.+++++... ...++.++++|+.++.. ..+
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~------g~~~v~~~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM------GVLNTIIINADMRKYKDYLLKNEI 155 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCHHHHHHHHHHTTC
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh------CCCcEEEEeCChHhcchhhhhccc
Confidence 357899999999999999999532 2 58999999999999999998643 22478999999987643 136
Q ss_pred ccchhhhhhH------Hh--------hcCc--hhHHHHHHHHHhhccCC
Q 024811 230 RYDVIWVQWC------IG--------HLTD--DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 230 ~yDlI~s~~v------l~--------hltD--~el~~~l~~~~~~LkPG 262 (262)
+||+|++..+ ++ ++.. ....++|+++.+.|+||
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 204 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD 204 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 8999998722 11 1110 12347999999999986
No 228
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.03 E-value=8.9e-11 Score=109.91 Aligned_cols=101 Identities=8% Similarity=0.027 Sum_probs=76.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCc-ceEEEEcCCCCCCC----CCCcc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTP----ETGRY 231 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~-~v~f~~~d~~~~~~----~~~~y 231 (262)
++.+|||+|||+|.++..++.....+|++||.|+.|++.|++++... .... +++|+++|+.++.+ ...+|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n-----~~~~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEAN-----HLDMANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHT-----TCCCTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCccceEEEECCHHHHHHHHHHhCCCc
Confidence 36799999999999999999444568999999999999999998642 1112 78999999977532 12489
Q ss_pred chhhhhhHH-----hhcCch--hHHHHHHHHHhhccCC
Q 024811 232 DVIWVQWCI-----GHLTDD--DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 232 DlI~s~~vl-----~hltD~--el~~~l~~~~~~LkPG 262 (262)
|+|++..+. +++.+. .+.+++..+.+.|+||
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pg 324 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN 324 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCC
Confidence 999997543 334332 3446888889999986
No 229
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.02 E-value=2.7e-10 Score=102.27 Aligned_cols=86 Identities=16% Similarity=0.162 Sum_probs=69.1
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC-Cccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~-~~yDlI 234 (262)
.++ +|||||||+|.+|..|+ +.+.+|++||.++.|++.+++++.. .+++++++|+.+++.+. ..+|.|
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~-~~~~~V~avEid~~~~~~l~~~~~~---------~~v~vi~~D~l~~~~~~~~~~~~i 114 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALL-EAGAEVTAIEKDLRLRPVLEETLSG---------LPVRLVFQDALLYPWEEVPQGSLL 114 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHH-HTTCCEEEEESCGGGHHHHHHHTTT---------SSEEEEESCGGGSCGGGSCTTEEE
T ss_pred CCC-eEEEEeCchHHHHHHHH-HcCCEEEEEECCHHHHHHHHHhcCC---------CCEEEEECChhhCChhhccCccEE
Confidence 356 99999999999999999 5678999999999999999998742 37899999999886643 268999
Q ss_pred hhhhHHhhcCchhHHHHHH
Q 024811 235 WVQWCIGHLTDDDFVSFFK 253 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~ 253 (262)
++|.. .+++.+-+..++.
T Consensus 115 v~NlP-y~iss~il~~ll~ 132 (271)
T 3fut_A 115 VANLP-YHIATPLVTRLLK 132 (271)
T ss_dssp EEEEC-SSCCHHHHHHHHH
T ss_pred EecCc-ccccHHHHHHHhc
Confidence 99875 4555555445554
No 230
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.02 E-value=2.7e-10 Score=101.07 Aligned_cols=96 Identities=8% Similarity=-0.040 Sum_probs=69.8
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
++.+|||||||+|.++..|++.. ..+|+++|.++.+++.|++++.... ...++++.++|..+..++..+||+|+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g-----l~~~I~v~~gD~l~~~~~~~~~D~Iv 95 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG-----LTEQIDVRKGNGLAVIEKKDAIDTIV 95 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT-----CTTTEEEEECSGGGGCCGGGCCCEEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEEecchhhccCccccccEEE
Confidence 57899999999999999999442 2379999999999999999986431 22368999999987654323699988
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQ 261 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkP 261 (262)
+... --.-+..++......|++
T Consensus 96 iagm----Gg~lI~~IL~~~~~~L~~ 117 (244)
T 3gnl_A 96 IAGM----GGTLIRTILEEGAAKLAG 117 (244)
T ss_dssp EEEE----CHHHHHHHHHHTGGGGTT
T ss_pred EeCC----chHHHHHHHHHHHHHhCC
Confidence 6432 112233566666666654
No 231
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.02 E-value=3e-10 Score=101.07 Aligned_cols=86 Identities=13% Similarity=0.181 Sum_probs=66.7
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC----CCcc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGRY 231 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~----~~~y 231 (262)
.++.+|||||||+|.+|..|+ +.+.+|++||.++.|++.+++++.. ..+++++++|+.+++++ .++|
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La-~~~~~V~avEid~~~~~~~~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~~~~ 98 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLL-TECDNLALVEIDRDLVAFLQKKYNQ--------QKNITIYQNDALQFDFSSVKTDKPL 98 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHT-TTSSEEEEEECCHHHHHHHHHHHTT--------CTTEEEEESCTTTCCGGGSCCSSCE
T ss_pred CCcCEEEEEcccccHHHHHHH-HhCCEEEEEECCHHHHHHHHHHHhh--------CCCcEEEEcchHhCCHHHhccCCCe
Confidence 357799999999999999999 6678999999999999999998753 24789999999998653 2468
Q ss_pred chhhhhhHHhhcCchhHHHHH
Q 024811 232 DVIWVQWCIGHLTDDDFVSFF 252 (262)
Q Consensus 232 DlI~s~~vl~hltD~el~~~l 252 (262)
| |++|... +++.+-+..++
T Consensus 99 ~-vv~NlPY-~is~~il~~ll 117 (255)
T 3tqs_A 99 R-VVGNLPY-NISTPLLFHLF 117 (255)
T ss_dssp E-EEEECCH-HHHHHHHHHHH
T ss_pred E-EEecCCc-ccCHHHHHHHH
Confidence 8 7777653 34444333444
No 232
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.00 E-value=4.1e-10 Score=101.58 Aligned_cols=94 Identities=15% Similarity=0.162 Sum_probs=75.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..+++....+|.++|.|+.+++.+++|+..- ....++.++++|..++.+. +.||.|++
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N-----~v~~~v~~~~~D~~~~~~~-~~~D~Vi~ 198 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLN-----KVEDRMSAYNMDNRDFPGE-NIADRILM 198 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHT-----TCTTTEEEECSCTTTCCCC-SCEEEEEE
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEeCcHHHhccc-cCCCEEEE
Confidence 57899999999999999999554568999999999999999998642 2234689999999998664 78999987
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.. .... .|+..+.++|+||
T Consensus 199 ~~p----~~~~--~~l~~a~~~lk~g 218 (278)
T 3k6r_A 199 GYV----VRTH--EFIPKALSIAKDG 218 (278)
T ss_dssp CCC----SSGG--GGHHHHHHHEEEE
T ss_pred CCC----CcHH--HHHHHHHHHcCCC
Confidence 743 2233 6777788888875
No 233
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.99 E-value=3.6e-10 Score=99.09 Aligned_cols=96 Identities=14% Similarity=0.033 Sum_probs=72.0
Q ss_pred CCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
++.+|||||||+|.++..++ ..+ .+|+++|.++.+++.|++++.... ...++++..+|..+.-+...+||+|
T Consensus 15 ~g~~VlDIGtGsG~l~i~la-~~~~~~~V~avDi~~~al~~A~~N~~~~g-----l~~~i~~~~~d~l~~l~~~~~~D~I 88 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELV-ERGQIKSAIAGEVVEGPYQSAVKNVEAHG-----LKEKIQVRLANGLAAFEETDQVSVI 88 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHH-HTTSEEEEEEEESSHHHHHHHHHHHHHTT-----CTTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHH-HhCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEEECchhhhcccCcCCCEE
Confidence 57799999999999999999 444 479999999999999999986531 2236899999985432322369999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++... .-.-+..++..+...|+|+
T Consensus 89 viaG~----Gg~~i~~Il~~~~~~L~~~ 112 (225)
T 3kr9_A 89 TIAGM----GGRLIARILEEGLGKLANV 112 (225)
T ss_dssp EEEEE----CHHHHHHHHHHTGGGCTTC
T ss_pred EEcCC----ChHHHHHHHHHHHHHhCCC
Confidence 87543 2222447888888888774
No 234
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.99 E-value=1.3e-11 Score=108.00 Aligned_cols=95 Identities=18% Similarity=0.220 Sum_probs=71.4
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-CCccchh
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVI 234 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~-~~~yDlI 234 (262)
.++.+|||+|||+|.++..|+ +.+.+|+++|+|+.|++.|++++.. ..+++++++|+.+++.. .++| .|
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~-~~~~~v~~id~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~f-~v 97 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLA-KISKQVTSIELDSHLFNLSSEKLKL--------NTRVTLIHQDILQFQFPNKQRY-KI 97 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHH-HHSSEEEESSSSCSSSSSSSCTTTT--------CSEEEECCSCCTTTTCCCSSEE-EE
T ss_pred CCCCEEEEEeCCCCHHHHHHH-HhCCeEEEEECCHHHHHHHHHHhcc--------CCceEEEECChhhcCcccCCCc-EE
Confidence 357799999999999999999 5568999999999999999887641 24789999999988654 2578 66
Q ss_pred hhhh-----------HHhhcCchhHHHHH----HHHHhhccCC
Q 024811 235 WVQW-----------CIGHLTDDDFVSFF----KRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~-----------vl~hltD~el~~~l----~~~~~~LkPG 262 (262)
+++. .+.|..+.. .+| +.+.++|+||
T Consensus 98 v~n~Py~~~~~~~~~~~~~~~~~~--~~lm~q~e~a~rll~~~ 138 (245)
T 1yub_A 98 VGNIPYHLSTQIIKKVVFESRASD--IYLIVEEGFYKRTLDIH 138 (245)
T ss_dssp EEECCSSSCHHHHHHHHHHCCCEE--EEEEEESSHHHHHHCGG
T ss_pred EEeCCccccHHHHHHHHhCCCCCe--EEEEeeHHHHHHHhCCC
Confidence 6653 233433333 444 6678888875
No 235
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.98 E-value=1.2e-10 Score=108.91 Aligned_cols=101 Identities=10% Similarity=0.015 Sum_probs=76.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC----CCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~----~~~yD 232 (262)
++.+|||+|||+|.++..++.....+|+++|.|+.+++.|++++... ....+++|+++|+.++.+. .++||
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n-----~~~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLN-----GVEDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-----TCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc-----CCCccceEEECCHHHHHHHHHhhCCCCC
Confidence 46799999999999999999443568999999999999999998642 1112789999999876331 35899
Q ss_pred hhhhhhHHhhcCc-------hhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTD-------DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD-------~el~~~l~~~~~~LkPG 262 (262)
+|++..+....+. .....++.++.+.|+||
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 328 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG 328 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999654322211 23347899999999986
No 236
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.98 E-value=1.1e-09 Score=104.34 Aligned_cols=101 Identities=9% Similarity=-0.010 Sum_probs=77.4
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--CCCcc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRY 231 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~--~~~~y 231 (262)
.++.+|||+|||+|..|..|+.... .+|+++|+|+.+++.+++++... ...++.++++|+.++.+ ..++|
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~------g~~~v~~~~~D~~~~~~~~~~~~f 331 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM------GIKIVKPLVKDARKAPEIIGEEVA 331 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT------TCCSEEEECSCTTCCSSSSCSSCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc------CCCcEEEEEcChhhcchhhccCCC
Confidence 3578999999999999999995432 57999999999999999998643 23478999999988752 22689
Q ss_pred chhhhh------hHHhhcCch-------hH-------HHHHHHHHhhccCC
Q 024811 232 DVIWVQ------WCIGHLTDD-------DF-------VSFFKRAKVNHSQT 262 (262)
Q Consensus 232 DlI~s~------~vl~hltD~-------el-------~~~l~~~~~~LkPG 262 (262)
|+|++. .++++.+|. ++ ..+|.++.+.|+||
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 382 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG 382 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999962 234444332 11 47899999999986
No 237
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.97 E-value=1e-10 Score=109.12 Aligned_cols=99 Identities=17% Similarity=0.069 Sum_probs=76.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC----CCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~----~~~yD 232 (262)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++... ...+++|+++|+.++.+. ..+||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n------~~~~~~~~~~d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLN------GLGNVRVLEANAFDLLRRLEKEGERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHT------TCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHc------CCCCceEEECCHHHHHHHHHhcCCCee
Confidence 4679999999999999999955 778999999999999999998642 223589999999876431 36899
Q ss_pred hhhhhhHHhhcCc-------hhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTD-------DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD-------~el~~~l~~~~~~LkPG 262 (262)
+|++..+....+. .....++..+.+.|+||
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 318 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG 318 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999654222111 23347999999999986
No 238
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.96 E-value=6.9e-10 Score=97.61 Aligned_cols=96 Identities=14% Similarity=-0.012 Sum_probs=71.0
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
++.+|||||||+|.++..|++.. ..+|+++|.++.+++.|++++.... ...++++.++|..+..++..+||+|+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g-----l~~~I~~~~gD~l~~~~~~~~~D~Iv 95 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG-----LTSKIDVRLANGLSAFEEADNIDTIT 95 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT-----CTTTEEEEECSGGGGCCGGGCCCEEE
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEECchhhccccccccCEEE
Confidence 57899999999999999999442 2479999999999999999986531 22469999999987654434799988
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQ 261 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkP 261 (262)
+..... +-+..++......|++
T Consensus 96 iaGmGg----~lI~~IL~~~~~~l~~ 117 (230)
T 3lec_A 96 ICGMGG----RLIADILNNDIDKLQH 117 (230)
T ss_dssp EEEECH----HHHHHHHHHTGGGGTT
T ss_pred EeCCch----HHHHHHHHHHHHHhCc
Confidence 654322 2234566666666655
No 239
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.96 E-value=2.1e-10 Score=107.97 Aligned_cols=98 Identities=9% Similarity=-0.079 Sum_probs=72.4
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-CCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~-~~~yDlI~ 235 (262)
++.+|||+|||||.++..++ ..+..|++||.|+.|++.|++++.... . ..++.++|+.++... .+.||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a-~~ga~V~avDis~~al~~a~~n~~~ng------~-~~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAA-RKGAYALAVDKDLEALGVLDQAALRLG------L-RVDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHT------C-CCEEEESCHHHHHHTCCCCEEEEE
T ss_pred CCCeEEEcccchhHHHHHHH-HcCCeEEEEECCHHHHHHHHHHHHHhC------C-CCcEEEccHHHHHHHhcCCCCEEE
Confidence 37799999999999999999 556669999999999999999985421 1 235778888775311 23599999
Q ss_pred hhhHHhhcCc-------hhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTD-------DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD-------~el~~~l~~~~~~LkPG 262 (262)
+..+...-+. .+...++..+.++|+||
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpG 319 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEE 319 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEE
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8754311111 12347888999999986
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.96 E-value=2.7e-10 Score=104.48 Aligned_cols=98 Identities=10% Similarity=0.080 Sum_probs=78.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcC------CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGR 230 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~------~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~ 230 (262)
++.+|||+|||+|.++..++.... .+|.++|+++.+++.|+.++... ..+++++++|..+..+ .++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~-------g~~~~i~~~D~l~~~~-~~~ 201 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ-------RQKMTLLHQDGLANLL-VDP 201 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH-------TCCCEEEESCTTSCCC-CCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC-------CCCceEEECCCCCccc-cCC
Confidence 467999999999999999984432 57999999999999999987542 1157899999876543 368
Q ss_pred cchhhhhhHHhhcCchhHH----------------HHHHHHHhhccCC
Q 024811 231 YDVIWVQWCIGHLTDDDFV----------------SFFKRAKVNHSQT 262 (262)
Q Consensus 231 yDlI~s~~vl~hltD~el~----------------~~l~~~~~~LkPG 262 (262)
||+|+++.+++++++++.. .|+.++.+.|+||
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~g 249 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPG 249 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEE
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCC
Confidence 9999999998888655422 5899999999985
No 241
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.96 E-value=1.6e-10 Score=96.12 Aligned_cols=90 Identities=18% Similarity=0.141 Sum_probs=64.8
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC----------CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEE-EcCCCCC
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF----------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF-CVPLQDF 224 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~----------~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~-~~d~~~~ 224 (262)
.++.+|||+|||+|.++..|+.... .+|+++|+|+.+ . ..++.++ .+|+.+.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~---------~~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------P---------LEGATFLCPADVTDP 83 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------C---------CTTCEEECSCCTTSH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------c---------CCCCeEEEeccCCCH
Confidence 3578999999999999999995543 579999999831 0 1257788 8888764
Q ss_pred C--------CCCCccchhhhhhH----HhhcCchh-----HHHHHHHHHhhccCC
Q 024811 225 T--------PETGRYDVIWVQWC----IGHLTDDD-----FVSFFKRAKVNHSQT 262 (262)
Q Consensus 225 ~--------~~~~~yDlI~s~~v----l~hltD~e-----l~~~l~~~~~~LkPG 262 (262)
. .+.++||+|+|..+ .+|..|.. ...+++++.++|+||
T Consensus 84 ~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 138 (196)
T 2nyu_A 84 RTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG 138 (196)
T ss_dssp HHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 2 12258999998653 33433431 137899999999986
No 242
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.96 E-value=1.9e-10 Score=108.81 Aligned_cols=88 Identities=11% Similarity=0.015 Sum_probs=69.6
Q ss_pred CCceeeEeecc------ccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-
Q 024811 157 QHLVALDCGSG------IGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE- 227 (262)
Q Consensus 157 ~~~~VLDlGcG------tG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~- 227 (262)
++.+||||||| ||..+..++.++ ..+|++||+|+.|. . ...+++|+++|+.++++.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~---------~~~rI~fv~GDa~dlpf~~ 280 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V---------DELRIRTIQGDQNDAEFLD 280 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G---------CBTTEEEEECCTTCHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h---------cCCCcEEEEecccccchhh
Confidence 46799999999 788888888554 35799999999983 1 124799999999986543
Q ss_pred -----CCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 228 -----TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 228 -----~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.++||+|+|.. .||+.+.. .+|+++.++||||
T Consensus 281 ~l~~~d~sFDlVisdg-sH~~~d~~--~aL~el~rvLKPG 317 (419)
T 3sso_A 281 RIARRYGPFDIVIDDG-SHINAHVR--TSFAALFPHVRPG 317 (419)
T ss_dssp HHHHHHCCEEEEEECS-CCCHHHHH--HHHHHHGGGEEEE
T ss_pred hhhcccCCccEEEECC-cccchhHH--HHHHHHHHhcCCC
Confidence 47899999975 46655544 8999999999997
No 243
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.94 E-value=2.2e-09 Score=102.04 Aligned_cols=91 Identities=16% Similarity=0.151 Sum_probs=69.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|.|+.|++.|++++... ... ++|+++|+.++.+. +||+|++
T Consensus 290 ~~~~VLDlgcG~G~~sl~la-~~~~~V~gvD~s~~ai~~A~~n~~~n------gl~-v~~~~~d~~~~~~~--~fD~Vv~ 359 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLA-KRGFNVKGFDSNEFAIEMARRNVEIN------NVD-AEFEVASDREVSVK--GFDTVIV 359 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHH------TCC-EEEEECCTTTCCCT--TCSEEEE
T ss_pred CCCEEEEeeccchHHHHHHH-HcCCEEEEEECCHHHHHHHHHHHHHc------CCc-EEEEECChHHcCcc--CCCEEEE
Confidence 46799999999999999999 56789999999999999999987532 123 89999999998543 8999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
...-..+. + .+++.+. .|+||
T Consensus 360 dPPr~g~~--~--~~~~~l~-~l~p~ 380 (425)
T 2jjq_A 360 DPPRAGLH--P--RLVKRLN-REKPG 380 (425)
T ss_dssp CCCTTCSC--H--HHHHHHH-HHCCS
T ss_pred cCCccchH--H--HHHHHHH-hcCCC
Confidence 76532221 1 3444444 36664
No 244
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.94 E-value=2.4e-10 Score=106.93 Aligned_cols=101 Identities=15% Similarity=0.100 Sum_probs=76.9
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCC-CcceEEEEcCCCCCCCC----CCcc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDM-HKATNFFCVPLQDFTPE----TGRY 231 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~-~~~v~f~~~d~~~~~~~----~~~y 231 (262)
++.+|||+|||+|.++..++.....+|++||.|+.+++.|++++... .. ..+++|+++|+.++.+. ..+|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~n-----gl~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELN-----KLDLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-----TCCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCccceEEEECCHHHHHHHHHhcCCCC
Confidence 46799999999999999999443568999999999999999998542 11 12789999999876331 3589
Q ss_pred chhhhhhHHhhc-----Cc--hhHHHHHHHHHhhccCC
Q 024811 232 DVIWVQWCIGHL-----TD--DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 232 DlI~s~~vl~hl-----tD--~el~~~l~~~~~~LkPG 262 (262)
|+|++..+.... .+ .....++.++.+.|+||
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 332 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEG 332 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEE
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999998643211 11 34458999999999986
No 245
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.91 E-value=2.5e-09 Score=101.39 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=62.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC----CCCccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~----~~~~yD 232 (262)
++.+|||+|||+|.++..|+ +.+.+|+++|.|+.|++.|++++... ...+++|+++|+.++.+ ..++||
T Consensus 286 ~~~~VLDlgcG~G~~~~~la-~~~~~V~gvD~s~~al~~A~~n~~~~------~~~~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLA-TQAASVVGVEGVPALVEKGQQNARLN------GLQNVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHH-TTSSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCCEEEECCCCCCHHHHHHH-hhCCEEEEEeCCHHHHHHHHHHHHHc------CCCceEEEECCHHHHhhhhhhhcCCCC
Confidence 46799999999999999999 55789999999999999999997542 23479999999988422 235899
Q ss_pred hhhhhhH
Q 024811 233 VIWVQWC 239 (262)
Q Consensus 233 lI~s~~v 239 (262)
+|+++..
T Consensus 359 ~Vv~dPP 365 (433)
T 1uwv_A 359 KVLLDPA 365 (433)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998754
No 246
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.91 E-value=1.9e-09 Score=103.96 Aligned_cols=100 Identities=10% Similarity=0.008 Sum_probs=76.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCccch
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~yDl 233 (262)
++.+|||+|||+|..|..|+.... ..|+++|+|+.+++.+++++... ...++.++++|+.++.. ..++||+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~------g~~nv~~~~~D~~~~~~~~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC------GISNVALTHFDGRVFGAAVPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH------TCCSEEEECCCSTTHHHHSTTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEeCCHHHhhhhccccCCE
Confidence 578999999999999999995432 47999999999999999998653 22468999999988753 3368999
Q ss_pred hhhhh------HHhhcCch-------h-------HHHHHHHHHhhccCC
Q 024811 234 IWVQW------CIGHLTDD-------D-------FVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~------vl~hltD~-------e-------l~~~l~~~~~~LkPG 262 (262)
|++.. ++.+.++. + ..++|.++.++||||
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 239 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPG 239 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99731 23333321 1 236899999999986
No 247
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.90 E-value=7.1e-10 Score=101.80 Aligned_cols=90 Identities=8% Similarity=0.081 Sum_probs=72.7
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
++.+|||+|||+|.++.. + ....+|+++|.|+.+++.|++++... ....+++|+++|+.++. ++||+|++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a-~~~~~V~~vD~s~~ai~~a~~n~~~n-----~l~~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-C-KNAKKIYAIDINPHAIELLKKNIKLN-----KLEHKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-T-TTSSEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCEEEEccCccCHHHHh-c-cCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEECChHHhc---CCCcEEEE
Confidence 467999999999999999 8 46778999999999999999998642 11246899999999875 68999999
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+-.. . .++..+.++|+||
T Consensus 265 dpP~~~----~--~~l~~~~~~L~~g 284 (336)
T 2yx1_A 265 NLPKFA----H--KFIDKALDIVEEG 284 (336)
T ss_dssp CCTTTG----G--GGHHHHHHHEEEE
T ss_pred CCcHhH----H--HHHHHHHHHcCCC
Confidence 743211 1 6888888888875
No 248
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.90 E-value=5.5e-10 Score=112.32 Aligned_cols=102 Identities=14% Similarity=0.081 Sum_probs=76.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCccchhh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVIW 235 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~yDlI~ 235 (262)
++.+|||+|||||.++..++.....+|++||.|+.+++.|++++.... ....+++|+++|+.++.+ ..++||+|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ng----l~~~~v~~i~~D~~~~l~~~~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNG----LTGRAHRLIQADCLAWLREANEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCccceEEEecCHHHHHHhcCCCccEEE
Confidence 367999999999999999995444569999999999999999986421 011368999999987522 236899999
Q ss_pred hhhHH-h------hcCc--hhHHHHHHHHHhhccCC
Q 024811 236 VQWCI-G------HLTD--DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl-~------hltD--~el~~~l~~~~~~LkPG 262 (262)
+..+. . +.-+ .+...++..+.++|+||
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkpg 650 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAG 650 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEE
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCC
Confidence 97632 1 0111 24457899999999986
No 249
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.87 E-value=2.4e-09 Score=101.33 Aligned_cols=100 Identities=13% Similarity=-0.014 Sum_probs=76.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC--CCCCccc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYD 232 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~-~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~--~~~~~yD 232 (262)
.++.+|||+|||+|..|..++.... .+|+++|+|+.+++.+++++... ..++.++++|+.++. ...++||
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~-------g~~~~~~~~D~~~~~~~~~~~~fD 317 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL-------GMKATVKQGDGRYPSQWCGEQQFD 317 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT-------TCCCEEEECCTTCTHHHHTTCCEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc-------CCCeEEEeCchhhchhhcccCCCC
Confidence 3578999999999999999994432 48999999999999999998643 124689999998874 2336899
Q ss_pred hhhhh------hHHhhcCch-------hH-------HHHHHHHHhhccCC
Q 024811 233 VIWVQ------WCIGHLTDD-------DF-------VSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~------~vl~hltD~-------el-------~~~l~~~~~~LkPG 262 (262)
+|++. .++++.++. ++ .++|.++.+.|+||
T Consensus 318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG 367 (429)
T 1sqg_A 318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 (429)
T ss_dssp EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE
T ss_pred EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99963 234444432 11 37899999999986
No 250
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.86 E-value=9.7e-10 Score=93.04 Aligned_cols=89 Identities=11% Similarity=-0.038 Sum_probs=65.4
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------C
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-------T 228 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~-------~ 228 (262)
.++.+|||+|||||.++..++ +...+|++||+++.. ...+++|+++|+.+.... .
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la-~~~~~V~gvD~~~~~-----------------~~~~v~~~~~D~~~~~~~~~~~~~~~ 85 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLN-SLARKIISIDLQEME-----------------EIAGVRFIRCDIFKETIFDDIDRALR 85 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHT-TTCSEEEEEESSCCC-----------------CCTTCEEEECCTTSSSHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHHHHHH-HcCCcEEEEeccccc-----------------cCCCeEEEEccccCHHHHHHHHHHhh
Confidence 357899999999999999999 557789999998741 123689999999876410 0
Q ss_pred ----Cccchhhhhh--------HHhhcCc-hhHHHHHHHHHhhccCC
Q 024811 229 ----GRYDVIWVQW--------CIGHLTD-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 229 ----~~yDlI~s~~--------vl~hltD-~el~~~l~~~~~~LkPG 262 (262)
++||+|+|.. ...|... .....+++.+.++|+||
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpG 132 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNG 132 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCC
Confidence 3899999853 2222222 12346899999999997
No 251
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.84 E-value=1.3e-09 Score=104.92 Aligned_cols=100 Identities=10% Similarity=-0.047 Sum_probs=75.1
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCccc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYD 232 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~yD 232 (262)
.++.+|||+|||+|..|..|+.... ..|+++|+|+.+++.+++++... ... +.++++|+.++.. ..++||
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~------G~~-v~~~~~Da~~l~~~~~~~FD 172 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW------GAP-LAVTQAPPRALAEAFGTYFH 172 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH------CCC-CEEECSCHHHHHHHHCSCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCe-EEEEECCHHHhhhhccccCC
Confidence 3578999999999999999995432 37999999999999999998653 223 7889999877642 236899
Q ss_pred hhhhhh------HHhhcCch-------hH-------HHHHHHHHhhccCC
Q 024811 233 VIWVQW------CIGHLTDD-------DF-------VSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~------vl~hltD~-------el-------~~~l~~~~~~LkPG 262 (262)
+|++.. ++.+-++. ++ .++|..+.++|+||
T Consensus 173 ~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG 222 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPG 222 (464)
T ss_dssp EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999532 23332221 11 47999999999986
No 252
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.78 E-value=9.7e-10 Score=97.77 Aligned_cols=80 Identities=16% Similarity=0.152 Sum_probs=61.4
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCH-------HHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--C
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS-------HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--E 227 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~-------~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~--~ 227 (262)
++.+|||+|||+|.++..|+ ..+.+|+++|.|+ .|++.|++++.... ...+++|+++|+.++.+ .
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA-~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~-----~~~ri~~~~~d~~~~l~~~~ 156 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLA-SLGLTVTAFEQHPAVACLLSDGIRRALLNPETQD-----TAARINLHFGNAAEQMPALV 156 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHH-HTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHH-----HHTTEEEEESCHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHH-HhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhC-----CccCeEEEECCHHHHHHhhh
Confidence 45789999999999999999 5577899999999 99999988764321 01248999999987522 2
Q ss_pred C--CccchhhhhhHHhh
Q 024811 228 T--GRYDVIWVQWCIGH 242 (262)
Q Consensus 228 ~--~~yDlI~s~~vl~h 242 (262)
+ ++||+|++...++|
T Consensus 157 ~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 157 KTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHCCCSEEEECCCC--
T ss_pred ccCCCccEEEECCCCCC
Confidence 2 58999999765555
No 253
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.77 E-value=3.9e-09 Score=98.94 Aligned_cols=100 Identities=18% Similarity=0.169 Sum_probs=77.9
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC---------------------------------------CcEEEEeCCHHHHHHH
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDAA 196 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~---------------------------------------~~V~~VD~s~~mld~A 196 (262)
.++.+|||.+||+|.++..++.... .+|.++|.++.|++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 3567999999999999999984321 3699999999999999
Q ss_pred HhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhhhHHh-hcCc-hhHHHHHHHHHhhccC
Q 024811 197 RESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIG-HLTD-DDFVSFFKRAKVNHSQ 261 (262)
Q Consensus 197 r~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~~vl~-hltD-~el~~~l~~~~~~LkP 261 (262)
++++..+. ....++|.++|+.++.++ .+||+|+++.+++ .+.+ +++..+++.+.+.|++
T Consensus 274 r~Na~~~g-----l~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 274 RENAEIAG-----VDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK 334 (385)
T ss_dssp HHHHHHHT-----CGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcC-----CCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh
Confidence 99986541 123689999999998764 5899999998753 3432 4566788888777764
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.76 E-value=4.6e-09 Score=98.81 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=76.2
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC---------------------------------------CcEEEEeCCHHHHHHH
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDAA 196 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~---------------------------------------~~V~~VD~s~~mld~A 196 (262)
.++.+|||.+||+|.++..++.... .+|+++|.|+.|++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 3567899999999999999884322 2499999999999999
Q ss_pred HhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhhhHHh-hcCc-hhHHHHHHHHHhhccC
Q 024811 197 RESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIG-HLTD-DDFVSFFKRAKVNHSQ 261 (262)
Q Consensus 197 r~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~~vl~-hltD-~el~~~l~~~~~~LkP 261 (262)
++++..+. ....++|+++|+.++.++ .+||+|+++.+++ .+.+ +++..+.+.+.+.|++
T Consensus 280 r~Na~~~g-----l~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~ 340 (393)
T 3k0b_A 280 KQNAVEAG-----LGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR 340 (393)
T ss_dssp HHHHHHTT-----CTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcC-----CCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc
Confidence 99986541 123589999999998765 5899999997643 2333 4556777777777664
No 255
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.74 E-value=2.7e-09 Score=99.03 Aligned_cols=75 Identities=20% Similarity=0.186 Sum_probs=60.5
Q ss_pred CceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--CC-------
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ET------- 228 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~--~~------- 228 (262)
+.+|||+|||+|.++..|+ +.+.+|++||.|+.|++.|++++... ...+++|+++|++++.+ ..
T Consensus 214 ~~~vLDl~cG~G~~~l~la-~~~~~V~gvd~~~~ai~~a~~n~~~n------g~~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALA-RNFDRVLATEIAKPSVAAAQYNIAAN------HIDNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CSEEEEESCTTSHHHHHHG-GGSSEEEEECCCHHHHHHHHHHHHHT------TCCSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCEEEEccCCCCHHHHHHH-hcCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEECCHHHHHHHHhhccccccc
Confidence 5689999999999999999 66789999999999999999997542 23478999999877521 11
Q ss_pred -------CccchhhhhhH
Q 024811 229 -------GRYDVIWVQWC 239 (262)
Q Consensus 229 -------~~yDlI~s~~v 239 (262)
.+||+|++...
T Consensus 287 ~~~~~~~~~fD~Vv~dPP 304 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPP 304 (369)
T ss_dssp GGSCGGGCCEEEEEECCC
T ss_pred cccccccCCCCEEEECcC
Confidence 27999987643
No 256
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.74 E-value=2.4e-09 Score=99.64 Aligned_cols=90 Identities=12% Similarity=0.018 Sum_probs=69.3
Q ss_pred CCceeeEeeccccHHHHHHHHh--cCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIR--YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~--~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
++.+|||+|||+|.++..+++. ...+|+++|+++.+++.| .+++++++|+.++.+. ++||+|
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------------~~~~~~~~D~~~~~~~-~~fD~I 102 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------------PWAEGILADFLLWEPG-EAFDLI 102 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------TTEEEEESCGGGCCCS-SCEEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------CCCcEEeCChhhcCcc-CCCCEE
Confidence 3569999999999999999954 246899999999999766 1578999999887654 689999
Q ss_pred hhhhHHhh----------cCchh-----------------HHHHHHHHHhhccCC
Q 024811 235 WVQWCIGH----------LTDDD-----------------FVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~vl~h----------ltD~e-----------------l~~~l~~~~~~LkPG 262 (262)
+++.++.. +.++. ...|+.++.++|+||
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~ 157 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPG 157 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEE
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCC
Confidence 99865432 22221 125789999999885
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.74 E-value=1.1e-08 Score=95.96 Aligned_cols=100 Identities=13% Similarity=0.120 Sum_probs=78.0
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC---------------------------------------CcEEEEeCCHHHHHHH
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDAA 196 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~---------------------------------------~~V~~VD~s~~mld~A 196 (262)
.++..+||.+||+|.+....+.... .+|.++|.|+.|++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 3567899999999999999883322 2499999999999999
Q ss_pred HhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhhhHHh-hcCc-hhHHHHHHHHHhhccC
Q 024811 197 RESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIG-HLTD-DDFVSFFKRAKVNHSQ 261 (262)
Q Consensus 197 r~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~~vl~-hltD-~el~~~l~~~~~~LkP 261 (262)
++|+..+. ....++|+++|+.++.++ .+||+|+++.+++ .+.+ +++..+++.+.+.|++
T Consensus 273 r~Na~~~g-----l~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 273 RKNAREVG-----LEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp HHHHHHTT-----CTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcC-----CCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 99986542 123589999999998765 5899999997653 3433 5677788888887765
No 258
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.72 E-value=7.2e-09 Score=93.29 Aligned_cols=73 Identities=10% Similarity=0.079 Sum_probs=57.4
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCc----EEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCC--
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNE----VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG-- 229 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~----V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~-- 229 (262)
.++.+|||||||+|.+|..|+ +.+.. |++||.|+.|++.++++. . .+++++++|+.+++++.-
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La-~~~~~~~~~V~avDid~~~l~~a~~~~-~---------~~v~~i~~D~~~~~~~~~~~ 109 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVI-ARLATPGSPLHAVELDRDLIGRLEQRF-G---------ELLELHAGDALTFDFGSIAR 109 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHH-HHHCBTTBCEEEEECCHHHHHHHHHHH-G---------GGEEEEESCGGGCCGGGGSC
T ss_pred CCcCEEEEEccccHHHHHHHH-HhCCCcCCeEEEEECCHHHHHHHHHhc-C---------CCcEEEECChhcCChhHhcc
Confidence 357899999999999999999 54556 999999999999999983 1 378999999998865421
Q ss_pred ----ccchhhhhhH
Q 024811 230 ----RYDVIWVQWC 239 (262)
Q Consensus 230 ----~yDlI~s~~v 239 (262)
..+.|++|..
T Consensus 110 ~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 110 PGDEPSLRIIGNLP 123 (279)
T ss_dssp SSSSCCEEEEEECC
T ss_pred cccCCceEEEEccC
Confidence 1235666653
No 259
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.71 E-value=9.6e-09 Score=90.79 Aligned_cols=78 Identities=12% Similarity=0.152 Sum_probs=59.7
Q ss_pred CCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC--Cccc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET--GRYD 232 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~--~~yD 232 (262)
.++.+|||+|||+|.+|..|+ +. ..+|++||.++.|++.++++ . ..+++++++|+.+++++. +.|
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~-~~~~~~v~avEid~~~~~~~~~~-~---------~~~v~~i~~D~~~~~~~~~~~~~- 97 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLL-QHPLKKLYVIELDREMVENLKSI-G---------DERLEVINEDASKFPFCSLGKEL- 97 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHT-TSCCSEEEEECCCHHHHHHHTTS-C---------CTTEEEECSCTTTCCGGGSCSSE-
T ss_pred CCcCEEEEEcCchHHHHHHHH-HcCCCeEEEEECCHHHHHHHHhc-c---------CCCeEEEEcchhhCChhHccCCc-
Confidence 357799999999999999999 55 47999999999999999987 3 137899999999986542 123
Q ss_pred hhhhhhHHhhcCch
Q 024811 233 VIWVQWCIGHLTDD 246 (262)
Q Consensus 233 lI~s~~vl~hltD~ 246 (262)
.|+++.. .+++.+
T Consensus 98 ~vv~NlP-y~i~~~ 110 (249)
T 3ftd_A 98 KVVGNLP-YNVASL 110 (249)
T ss_dssp EEEEECC-TTTHHH
T ss_pred EEEEECc-hhccHH
Confidence 5666544 234443
No 260
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.70 E-value=3.5e-09 Score=96.42 Aligned_cols=75 Identities=20% Similarity=0.233 Sum_probs=60.4
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--C---CCc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--E---TGR 230 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~--~---~~~ 230 (262)
++.+|||+|||+|..+..++... ..+|+++|.|+.|++.|++++... ..+++|+++|+.+++. . ..+
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~-------g~~v~~v~~d~~~l~~~l~~~g~~~ 98 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF-------SDRVSLFKVSYREADFLLKTLGIEK 98 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG-------TTTEEEEECCGGGHHHHHHHTTCSC
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEECCHHHHHHHHHhcCCCC
Confidence 57799999999999999999543 368999999999999999998642 1478999999887631 1 147
Q ss_pred cchhhhhh
Q 024811 231 YDVIWVQW 238 (262)
Q Consensus 231 yDlI~s~~ 238 (262)
||.|++..
T Consensus 99 ~D~Vl~D~ 106 (301)
T 1m6y_A 99 VDGILMDL 106 (301)
T ss_dssp EEEEEEEC
T ss_pred CCEEEEcC
Confidence 99998753
No 261
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.70 E-value=6e-09 Score=99.97 Aligned_cols=101 Identities=14% Similarity=0.017 Sum_probs=75.1
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCccc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYD 232 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~yD 232 (262)
.++.+|||+|||+|..|..|+.... ..|+++|+|+.+++.+++++... ...++.+++.|..++.. .+++||
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~------g~~nv~v~~~Da~~l~~~~~~~FD 177 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW------GVSNAIVTNHAPAELVPHFSGFFD 177 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH------TCSSEEEECCCHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCceEEEeCCHHHhhhhccccCC
Confidence 3578999999999999999995432 47999999999999999998654 23468899999877642 236899
Q ss_pred hhhhhhH---HhhcC-chhH----------------HHHHHHHHhhccCC
Q 024811 233 VIWVQWC---IGHLT-DDDF----------------VSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~v---l~hlt-D~el----------------~~~l~~~~~~LkPG 262 (262)
+|++... ++.+. +++. .++|..+.++|+||
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG 227 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK 227 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9997432 12111 1111 26899999999986
No 262
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.70 E-value=9.7e-09 Score=97.54 Aligned_cols=101 Identities=12% Similarity=0.053 Sum_probs=77.1
Q ss_pred CCceeeEeeccccHHHHHHHHhc--------------CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCC
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--------------~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~ 222 (262)
++.+|||.|||+|.+...++... ..++.++|.++.+++.|+.++..... ...+.+++++|..
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~----~~~~~~i~~gD~l 246 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI----GTDRSPIVCEDSL 246 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC----CSSCCSEEECCTT
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC----CcCCCCEeeCCCC
Confidence 46799999999999999888431 35799999999999999988753210 0015678999988
Q ss_pred CCCCCCCccchhhhhhHHhhcCchh---------------HHHHHHHHHhhccCC
Q 024811 223 DFTPETGRYDVIWVQWCIGHLTDDD---------------FVSFFKRAKVNHSQT 262 (262)
Q Consensus 223 ~~~~~~~~yDlI~s~~vl~hltD~e---------------l~~~l~~~~~~LkPG 262 (262)
..... .+||+|+++.++++....+ -..|+.++.+.|+||
T Consensus 247 ~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~g 300 (445)
T 2okc_A 247 EKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTG 300 (445)
T ss_dssp TSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEE
T ss_pred CCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccC
Confidence 77554 4899999998877654321 137899999999985
No 263
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.69 E-value=3.2e-09 Score=94.77 Aligned_cols=83 Identities=18% Similarity=0.067 Sum_probs=63.0
Q ss_pred ceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCC---cceEEEEcCCCCCCC-CCCccchh
Q 024811 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH---KATNFFCVPLQDFTP-ETGRYDVI 234 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~---~~v~f~~~d~~~~~~-~~~~yDlI 234 (262)
.+|||+|||+|..+..|+. .+.+|++||.++.+.+.+++++..++.+..... .+++++++|..++-. -..+||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~-~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLAS-VGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHH-HTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 7999999999999999994 466899999999998888887765432211111 468999999877522 12479999
Q ss_pred hhhhHHhh
Q 024811 235 WVQWCIGH 242 (262)
Q Consensus 235 ~s~~vl~h 242 (262)
++...+.+
T Consensus 169 ~lDP~y~~ 176 (258)
T 2oyr_A 169 YLDPMFPH 176 (258)
T ss_dssp EECCCCCC
T ss_pred EEcCCCCC
Confidence 99877655
No 264
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.64 E-value=7.8e-09 Score=91.63 Aligned_cols=73 Identities=8% Similarity=0.062 Sum_probs=57.3
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCc--EEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC-----
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET----- 228 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~--V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~----- 228 (262)
.++.+|||||||+|.+|. +. + +.+ |++||+++.|++.+++++.. ..+++++++|+.+++.+.
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~~ 88 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFL--------GPKLTIYQQDAMTFNFGELAEKM 88 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTT--------GGGEEEECSCGGGCCHHHHHHHH
T ss_pred CCcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhcc--------CCceEEEECchhhCCHHHhhccc
Confidence 356799999999999999 65 4 567 99999999999999998742 247899999998875431
Q ss_pred CccchhhhhhH
Q 024811 229 GRYDVIWVQWC 239 (262)
Q Consensus 229 ~~yDlI~s~~v 239 (262)
+..|.|++|..
T Consensus 89 ~~~~~vvsNlP 99 (252)
T 1qyr_A 89 GQPLRVFGNLP 99 (252)
T ss_dssp TSCEEEEEECC
T ss_pred CCceEEEECCC
Confidence 12467777754
No 265
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.63 E-value=1.3e-08 Score=95.05 Aligned_cols=103 Identities=12% Similarity=0.033 Sum_probs=73.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhccccccc-CCC-CCcceEEEEcCCCCCCC----CCCc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM-APD-MHKATNFFCVPLQDFTP----ETGR 230 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~-~~~-~~~~v~f~~~d~~~~~~----~~~~ 230 (262)
.+.+|||||||+|.++..+++....+|++||+++.+++.|++++...... ..+ ...+++++.+|..++-. ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 46799999999999999999544568999999999999999998532110 000 01268999999988743 2368
Q ss_pred cchhhhhhHH-h------hcCchhHHHHHHHH----HhhccCC
Q 024811 231 YDVIWVQWCI-G------HLTDDDFVSFFKRA----KVNHSQT 262 (262)
Q Consensus 231 yDlI~s~~vl-~------hltD~el~~~l~~~----~~~LkPG 262 (262)
||+|++...- . ++.. .+|++.+ .++|+||
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t---~eFy~~~~~~~~~~L~pg 307 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDST---WEFLRLILDLSMKVLKQD 307 (364)
T ss_dssp EEEEEEECCSSCCCCC----CH---HHHHHHHHHHHHHTEEEE
T ss_pred ceEEEECCCCcccCcCchhhhH---HHHHHHHHHHHHhhCCCC
Confidence 9999987532 1 2221 2566666 8999986
No 266
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.60 E-value=1.4e-08 Score=96.25 Aligned_cols=77 Identities=19% Similarity=0.144 Sum_probs=62.2
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC--CCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--TGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~--~~~yDlI 234 (262)
++.+|||+|||+|..+..|+ +.+.+|++||.|+.|++.|++++.... ....+++|+++|+.++-+. .++||+|
T Consensus 93 ~g~~VLDLgcG~G~~al~LA-~~g~~V~~VD~s~~~l~~Ar~N~~~~~----~gl~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALM-SKASQGIYIERNDETAVAARHNIPLLL----NEGKDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHS----CTTCEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred CCCEEEEeCCCchHHHHHHH-hcCCEEEEEECCHHHHHHHHHhHHHhc----cCCCcEEEEECcHHHhhhhccCCCceEE
Confidence 36799999999999999999 667899999999999999999986420 0124799999999986221 2489999
Q ss_pred hhhh
Q 024811 235 WVQW 238 (262)
Q Consensus 235 ~s~~ 238 (262)
++..
T Consensus 168 ~lDP 171 (410)
T 3ll7_A 168 YVDP 171 (410)
T ss_dssp EECC
T ss_pred EECC
Confidence 9964
No 267
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.41 E-value=3.3e-07 Score=83.45 Aligned_cols=75 Identities=12% Similarity=0.045 Sum_probs=60.9
Q ss_pred CCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC---Cc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---GR 230 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~---~~ 230 (262)
.++.+|||+|||+|..|..|+... ...|+++|.++.+++.+++++... ...++.++++|+.++.+.. .+
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~------g~~~v~~~~~D~~~~~~~~~~~~~ 174 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA------GVSCCELAEEDFLAVSPSDPRYHE 174 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCGGGSCTTCGGGTT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCeEEEEeCChHhcCccccccCC
Confidence 357899999999999999999543 257999999999999999998653 2347899999988775421 47
Q ss_pred cchhhh
Q 024811 231 YDVIWV 236 (262)
Q Consensus 231 yDlI~s 236 (262)
||.|++
T Consensus 175 fD~Vl~ 180 (309)
T 2b9e_A 175 VHYILL 180 (309)
T ss_dssp EEEEEE
T ss_pred CCEEEE
Confidence 999997
No 268
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.36 E-value=1.6e-07 Score=85.02 Aligned_cols=86 Identities=8% Similarity=0.003 Sum_probs=60.5
Q ss_pred CCCCceeeEeec------cccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEE-EEcCCCCCC
Q 024811 155 NNQHLVALDCGS------GIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF-FCVPLQDFT 225 (262)
Q Consensus 155 ~~~~~~VLDlGc------GtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f-~~~d~~~~~ 225 (262)
..++.+|||+|| |+|. ..++... ..+|+++|+|+. +. +++| +++|+.++.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v~-----------~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------VS-----------DADSTLIGDCATVH 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------BC-----------SSSEEEESCGGGCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------CC-----------CCEEEEECccccCC
Confidence 446789999999 5576 3344232 257999999998 21 4678 999998876
Q ss_pred CCCCccchhhhhhHHh--------hcCchh-HHHHHHHHHhhccCC
Q 024811 226 PETGRYDVIWVQWCIG--------HLTDDD-FVSFFKRAKVNHSQT 262 (262)
Q Consensus 226 ~~~~~yDlI~s~~vl~--------hltD~e-l~~~l~~~~~~LkPG 262 (262)
+. ++||+|+|+...+ |....+ +..+|+.+.++|+||
T Consensus 120 ~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpG 164 (290)
T 2xyq_A 120 TA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALG 164 (290)
T ss_dssp CS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEE
T ss_pred cc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCC
Confidence 54 6899999974311 111122 347999999999996
No 269
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.34 E-value=2e-07 Score=83.86 Aligned_cols=109 Identities=10% Similarity=-0.005 Sum_probs=64.6
Q ss_pred HHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcC
Q 024811 142 LQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP 220 (262)
Q Consensus 142 L~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d 220 (262)
|..+..+.+ +.++.+|||+|||+|..+..++.+. ...|.++|.+..+...... .. ....++.++..+
T Consensus 63 L~ei~ek~~----l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-~~-------~~g~~ii~~~~~ 130 (277)
T 3evf_A 63 LRWFHERGY----VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-VQ-------SLGWNIITFKDK 130 (277)
T ss_dssp HHHHHHTTS----SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-CC-------BTTGGGEEEECS
T ss_pred HHHHHHhCC----CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-cC-------cCCCCeEEEecc
Confidence 555554322 4567899999999999999988442 3467788876443100000 00 011244445555
Q ss_pred CCCCCCCCCccchhhhhhHHh---hcCch-hHHHHHHHHHhhccCC
Q 024811 221 LQDFTPETGRYDVIWVQWCIG---HLTDD-DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 221 ~~~~~~~~~~yDlI~s~~vl~---hltD~-el~~~l~~~~~~LkPG 262 (262)
++......++||+|+|..+.+ |..|. ....+|+.+.++|+||
T Consensus 131 ~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG 176 (277)
T 3evf_A 131 TDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACG 176 (277)
T ss_dssp CCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCC
Confidence 543333446899999986443 22222 2224578889999997
No 270
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.33 E-value=1.4e-07 Score=88.21 Aligned_cols=99 Identities=13% Similarity=0.036 Sum_probs=70.7
Q ss_pred CceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhccccccc-C-C-------CCCcceEEEEcCCCCCCCC
Q 024811 158 HLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHM-A-P-------DMHKATNFFCVPLQDFTPE 227 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~-~-~-------~~~~~v~f~~~d~~~~~~~ 227 (262)
+.+|||+|||+|.++..++.+. ..+|+++|.++.+++.+++|+...... . . ....++.++++|+.++...
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 6789999999999999999653 357999999999999999998642000 0 0 0112488999998765321
Q ss_pred -CCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 228 -TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 228 -~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.++||+|++... . ... .++..+.+.|+||
T Consensus 128 ~~~~fD~I~lDP~-~---~~~--~~l~~a~~~lk~g 157 (378)
T 2dul_A 128 RHRYFHFIDLDPF-G---SPM--EFLDTALRSAKRR 157 (378)
T ss_dssp STTCEEEEEECCS-S---CCH--HHHHHHHHHEEEE
T ss_pred ccCCCCEEEeCCC-C---CHH--HHHHHHHHhcCCC
Confidence 247999996531 1 122 6888888888874
No 271
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.31 E-value=2.1e-07 Score=87.62 Aligned_cols=95 Identities=9% Similarity=0.048 Sum_probs=71.4
Q ss_pred CCceeeEeeccccHHHHHHHHhc-C-CcEEEEeCCHHHHHHHHhhcccccccCCCCCcc-eEEEEcCCCCCCC--CCCcc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKA-TNFFCVPLQDFTP--ETGRY 231 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~-~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~-v~f~~~d~~~~~~--~~~~y 231 (262)
++.+|||++||+|.++..++.+. + .+|+++|.++.+++.+++|+..- ....+ +.++++|+.++.. ..++|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N-----gl~~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN-----NIPEDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT-----TCCGGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh-----CCCCceEEEEeCCHHHHHHHhhCCCC
Confidence 36799999999999999999542 3 57999999999999999998642 11123 8999999866522 12579
Q ss_pred chhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 232 DVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 232 DlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+|++.. + .... .++..+.+.|+||
T Consensus 127 D~V~lDP---~-g~~~--~~l~~a~~~Lk~g 151 (392)
T 3axs_A 127 DYVDLDP---F-GTPV--PFIESVALSMKRG 151 (392)
T ss_dssp EEEEECC---S-SCCH--HHHHHHHHHEEEE
T ss_pred cEEEECC---C-cCHH--HHHHHHHHHhCCC
Confidence 9999876 1 2222 5788888888775
No 272
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.25 E-value=1.7e-07 Score=84.49 Aligned_cols=107 Identities=10% Similarity=-0.018 Sum_probs=62.8
Q ss_pred HHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEc-
Q 024811 142 LQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV- 219 (262)
Q Consensus 142 L~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~- 219 (262)
|..+..+.+ +.++.+|||||||+|..+..++.+. ...|.++|.+..+...+..+.. ...++.++..
T Consensus 79 L~ei~eK~~----Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~--------~g~~ii~~~~~ 146 (282)
T 3gcz_A 79 LRWMEERGY----VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTT--------LGWNLIRFKDK 146 (282)
T ss_dssp HHHHHHTTS----CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCB--------TTGGGEEEECS
T ss_pred HHHHHHhcC----CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccccc--------CCCceEEeeCC
Confidence 555555432 4567899999999999999988433 3468888887765322221100 1123333333
Q ss_pred -CCCCCCCCCCccchhhhhhHHh---hcCch-hHHHHHHHHHhhccCC
Q 024811 220 -PLQDFTPETGRYDVIWVQWCIG---HLTDD-DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 220 -d~~~~~~~~~~yDlI~s~~vl~---hltD~-el~~~l~~~~~~LkPG 262 (262)
|+.++ ...++|+|+|-.+.+ +..|. ....+|.-+.++|+||
T Consensus 147 ~dv~~l--~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g 192 (282)
T 3gcz_A 147 TDVFNM--EVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEG 192 (282)
T ss_dssp CCGGGS--CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhc--CCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCC
Confidence 44333 346899999976543 11122 2223577777888775
No 273
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.25 E-value=7.9e-07 Score=89.36 Aligned_cols=99 Identities=12% Similarity=0.092 Sum_probs=72.7
Q ss_pred CCceeeEeeccccHHHHHHHHhc-------------------------------------------CCcEEEEeCCHHHH
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-------------------------------------------FNEVDLLEPVSHFL 193 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-------------------------------------------~~~V~~VD~s~~ml 193 (262)
++.+|||.+||+|.+...++... ...|.++|.++.|+
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 56789999999999999888431 13699999999999
Q ss_pred HHHHhhcccccccCCCCCcceEEEEcCCCCCCCC--CCccchhhhhhHHhh-cC-chhHHHHHHHHHhhcc
Q 024811 194 DAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--TGRYDVIWVQWCIGH-LT-DDDFVSFFKRAKVNHS 260 (262)
Q Consensus 194 d~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~--~~~yDlI~s~~vl~h-lt-D~el~~~l~~~~~~Lk 260 (262)
+.|+.|+..+. ....+.|.++|+.++.++ .++||+|++|.+.+. +. ++++..+.+.+.+.|+
T Consensus 270 ~~A~~N~~~ag-----v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 270 QRARTNARLAG-----IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp HHHHHHHHHTT-----CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-----CCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHH
Confidence 99999987642 223589999999987543 238999999977542 33 3455566666655544
No 274
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.20 E-value=1.4e-06 Score=86.55 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=69.1
Q ss_pred CceeeEeeccccHHHHHHH---HhcCC--cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccc
Q 024811 158 HLVALDCGSGIGRITKNLL---IRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La---~~~~~--~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yD 232 (262)
...|||+|||+|-++...+ ++... +|.+||.|+ |...|++....- .-...|+++.+|++++..+ ++.|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N-----~~~dkVtVI~gd~eev~LP-EKVD 430 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFE-----EWGSQVTVVSSDMREWVAP-EKAD 430 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHH-----TTGGGEEEEESCTTTCCCS-SCEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhc-----cCCCeEEEEeCcceeccCC-cccC
Confidence 4579999999999954444 22233 589999997 666777765321 2345799999999999876 6999
Q ss_pred hhhhhhHHhhcCc-hhHHHHHHHHHhhccCC
Q 024811 233 VIWVQWCIGHLTD-DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 233 lI~s~~vl~hltD-~el~~~l~~~~~~LkPG 262 (262)
+|||-|. +++-. +-..+.+....+.||||
T Consensus 431 IIVSEwM-G~fLl~E~mlevL~Ardr~LKPg 460 (637)
T 4gqb_A 431 IIVSELL-GSFADNELSPECLDGAQHFLKDD 460 (637)
T ss_dssp EEECCCC-BTTBGGGCHHHHHHHHGGGEEEE
T ss_pred EEEEEcC-cccccccCCHHHHHHHHHhcCCC
Confidence 9999874 33333 33335677778889885
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.19 E-value=1e-06 Score=85.93 Aligned_cols=100 Identities=9% Similarity=-0.102 Sum_probs=74.0
Q ss_pred CCceeeEeeccccHHHHHHHHhc-------------------CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcc----
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-------------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA---- 213 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-------------------~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~---- 213 (262)
++.+|||.+||+|.+...++... ..++.++|.++.++..|+.++... ....
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~------gi~~~~~~ 242 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH------DIEGNLDH 242 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT------TCCCBGGG
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh------CCCccccc
Confidence 46799999999999998887432 136999999999999999887532 1122
Q ss_pred -eEEEEcCCCCCCC-CCCccchhhhhhHHhhcCch------------hHHHHHHHHHhhccCC
Q 024811 214 -TNFFCVPLQDFTP-ETGRYDVIWVQWCIGHLTDD------------DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 214 -v~f~~~d~~~~~~-~~~~yDlI~s~~vl~hltD~------------el~~~l~~~~~~LkPG 262 (262)
.+++++|.....+ ...+||+|+++.+++..... .-..|+.++.+.|+||
T Consensus 243 ~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~g 305 (541)
T 2ar0_A 243 GGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPG 305 (541)
T ss_dssp TBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEE
T ss_pred cCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCC
Confidence 6788998876432 23589999999887654321 1126999999999985
No 276
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.18 E-value=2.7e-06 Score=77.23 Aligned_cols=102 Identities=15% Similarity=0.139 Sum_probs=76.3
Q ss_pred CCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCccchh
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~yDlI 234 (262)
.+.+||=||.|.|.+++.+++.. ..+|++||+++..++.|++.+...... .-..++++++..|...|-. ..++||+|
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~-~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAG-SYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTT-GGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCcccccc-ccCCCcEEEEechHHHHHhhccccCCEE
Confidence 56799999999999999999432 468999999999999999987532110 0124689999999988742 34689999
Q ss_pred hhhhH-----HhhcCchhHHHHHHHHHhhccCC
Q 024811 235 WVQWC-----IGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 235 ~s~~v-----l~hltD~el~~~l~~~~~~LkPG 262 (262)
++-.. -.+|-.. +|++.|++.|+||
T Consensus 162 i~D~~dp~~~~~~L~t~---eFy~~~~~~L~p~ 191 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTS---AFYEGCKRCLNPG 191 (294)
T ss_dssp EESCCCCCCTTCCSSCC---HHHHHHHHTEEEE
T ss_pred EEeCCCcCCCchhhcCH---HHHHHHHHHhCCC
Confidence 97532 1222222 6999999999985
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.06 E-value=1e-06 Score=88.28 Aligned_cols=98 Identities=13% Similarity=0.131 Sum_probs=71.0
Q ss_pred CceeeEeeccccHHHHHHHHh---cC-----------CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCC
Q 024811 158 HLVALDCGSGIGRITKNLLIR---YF-----------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD 223 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~---~~-----------~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~ 223 (262)
...|||+|||+|-++...+.. .. .+|.+||.|+.++..++.+... .-...++++.+|+++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~N------g~~d~VtVI~gd~ee 483 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVR------TWKRRVTIIESDMRS 483 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHH------TTTTCSEEEESCGGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhc------CCCCeEEEEeCchhh
Confidence 357999999999997543311 11 2899999999877666655431 123469999999999
Q ss_pred CCCC-----CCccchhhhhhHHhhcCchh-HHHHHHHHHhhccCC
Q 024811 224 FTPE-----TGRYDVIWVQWCIGHLTDDD-FVSFFKRAKVNHSQT 262 (262)
Q Consensus 224 ~~~~-----~~~yDlI~s~~vl~hltD~e-l~~~l~~~~~~LkPG 262 (262)
+..+ .++.|+|||-|. +++-+.| ..+.|..+.+.|+||
T Consensus 484 v~lp~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~ 527 (745)
T 3ua3_A 484 LPGIAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPT 527 (745)
T ss_dssp HHHHHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTT
T ss_pred cccccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCC
Confidence 9652 369999999875 5554444 456888888999986
No 278
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.98 E-value=3.9e-05 Score=65.95 Aligned_cols=103 Identities=17% Similarity=0.092 Sum_probs=72.0
Q ss_pred HHHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEE
Q 024811 138 SEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF 216 (262)
Q Consensus 138 s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f 216 (262)
..+||...+. +..+|||+|| |.-|..++ +. ..+|+.||.+++..+.|+++++.+... ...++++
T Consensus 20 ~~~~L~~~l~---------~a~~VLEiGt--GySTl~lA-~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~---~~~~I~~ 84 (202)
T 3cvo_A 20 EAEALRMAYE---------EAEVILEYGS--GGSTVVAA-ELPGKHVTSVESDRAWARMMKAWLAANPPA---EGTEVNI 84 (202)
T ss_dssp HHHHHHHHHH---------HCSEEEEESC--SHHHHHHH-TSTTCEEEEEESCHHHHHHHHHHHHHSCCC---TTCEEEE
T ss_pred HHHHHHHHhh---------CCCEEEEECc--hHHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCCceEE
Confidence 4566766543 3568999998 57888888 54 578999999999999999999764210 0347899
Q ss_pred EEcCCCCC---------------C---------CCCCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 217 FCVPLQDF---------------T---------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 217 ~~~d~~~~---------------~---------~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
+.+|+.+. + ...++||+|++-.-.. ...+..+...|+||
T Consensus 85 ~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~-------~~~~~~~l~~l~~G 147 (202)
T 3cvo_A 85 VWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR-------VGCALATAFSITRP 147 (202)
T ss_dssp EECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH-------HHHHHHHHHHCSSC
T ss_pred EEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc-------hhHHHHHHHhcCCC
Confidence 99997543 1 1226899999875211 14555567888886
No 279
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.96 E-value=2.8e-06 Score=69.86 Aligned_cols=75 Identities=9% Similarity=-0.011 Sum_probs=53.5
Q ss_pred CCceeeEeecccc-HHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC-Cccchh
Q 024811 157 QHLVALDCGSGIG-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDVI 234 (262)
Q Consensus 157 ~~~~VLDlGcGtG-~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~-~~yDlI 234 (262)
.+.+|||+|||.| +++..|+.+.+-+|+++|+++..++ |++.|+.+...+. ..||+|
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------------------~v~dDiF~P~~~~Y~~~DLI 93 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------------------IVRDDITSPRMEIYRGAALI 93 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------------------EECCCSSSCCHHHHTTEEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------------------eEEccCCCCcccccCCcCEE
Confidence 4679999999999 7999999547778999998877654 6667777643321 379999
Q ss_pred hhhhHHhhcCchhHHHHHHHHHh
Q 024811 235 WVQWCIGHLTDDDFVSFFKRAKV 257 (262)
Q Consensus 235 ~s~~vl~hltD~el~~~l~~~~~ 257 (262)
++.. +.+|+...+.++++
T Consensus 94 Ysir-----PP~El~~~i~~lA~ 111 (153)
T 2k4m_A 94 YSIR-----PPAEIHSSLMRVAD 111 (153)
T ss_dssp EEES-----CCTTTHHHHHHHHH
T ss_pred EEcC-----CCHHHHHHHHHHHH
Confidence 7754 34455555555544
No 280
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.92 E-value=9.3e-06 Score=75.97 Aligned_cols=106 Identities=13% Similarity=0.124 Sum_probs=62.9
Q ss_pred CCceeeEeeccccHHHHHHHHhc-------C-------C--cEEEEeCCHHHHHHHHhhcccccccC-----CC-CCcce
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY-------F-------N--EVDLLEPVSHFLDAARESLAPENHMA-----PD-MHKAT 214 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~-------~-------~--~V~~VD~s~~mld~Ar~~l~~a~~~~-----~~-~~~~v 214 (262)
.+.+|+|+|||+|..|..++... + + +|.+-|+........=+.+....+.. .. ....-
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 36899999999999999884221 1 2 34455665555443333333221100 00 00011
Q ss_pred EEEE---cCCCCCCCCCCccchhhhhhHHhhcCc-h-----------------------------------hHHHHHHHH
Q 024811 215 NFFC---VPLQDFTPETGRYDVIWVQWCIGHLTD-D-----------------------------------DFVSFFKRA 255 (262)
Q Consensus 215 ~f~~---~d~~~~~~~~~~yDlI~s~~vl~hltD-~-----------------------------------el~~~l~~~ 255 (262)
.|+. +.+..-.++++++|+|+|+++|||+++ + |+..||+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2332 233222234579999999999999984 1 556789999
Q ss_pred HhhccCC
Q 024811 256 KVNHSQT 262 (262)
Q Consensus 256 ~~~LkPG 262 (262)
++.|+||
T Consensus 212 a~eL~pG 218 (374)
T 3b5i_A 212 AAEVKRG 218 (374)
T ss_dssp HHHEEEE
T ss_pred HHHhCCC
Confidence 9999997
No 281
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.84 E-value=1.2e-05 Score=72.62 Aligned_cols=81 Identities=19% Similarity=0.095 Sum_probs=63.2
Q ss_pred CCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-----CCCc
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----ETGR 230 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-----~~~~ 230 (262)
.+++.+||++||.|..|..|+.. ..+|.++|.++.+++.|++ +.. .++.|+++++.++.. ..++
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~---------~rv~lv~~~f~~l~~~L~~~g~~~ 89 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL---------PGLTVVQGNFRHLKRHLAALGVER 89 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC---------TTEEEEESCGGGHHHHHHHTTCSC
T ss_pred CCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc---------CCEEEEECCcchHHHHHHHcCCCC
Confidence 35779999999999999999954 6689999999999999999 742 378999999887631 1246
Q ss_pred cchhhhhh--HHhhcCchh
Q 024811 231 YDVIWVQW--CIGHLTDDD 247 (262)
Q Consensus 231 yDlI~s~~--vl~hltD~e 247 (262)
+|.|++.. +.+|+.+++
T Consensus 90 vDgIL~DLGvSS~Qld~~~ 108 (285)
T 1wg8_A 90 VDGILADLGVSSFHLDDPS 108 (285)
T ss_dssp EEEEEEECSCCHHHHHCGG
T ss_pred cCEEEeCCccccccccccc
Confidence 89888642 456665554
No 282
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.84 E-value=2e-05 Score=73.69 Aligned_cols=71 Identities=13% Similarity=0.073 Sum_probs=55.9
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchh
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI 234 (262)
+.++.+|||+||++|..|..|+ +.+..|++||+.+ |-..... .++++++..|...+.+..++||+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~-~rg~~V~aVD~~~-l~~~l~~------------~~~V~~~~~d~~~~~~~~~~~D~v 274 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLV-KRNMWVYSVDNGP-MAQSLMD------------TGQVTWLREDGFKFRPTRSNISWM 274 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHH-HTTCEEEEECSSC-CCHHHHT------------TTCEEEECSCTTTCCCCSSCEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHH-HCCCEEEEEEhhh-cChhhcc------------CCCeEEEeCccccccCCCCCcCEE
Confidence 4468899999999999999999 6677999999763 2222111 347899999999998876789999
Q ss_pred hhhhH
Q 024811 235 WVQWC 239 (262)
Q Consensus 235 ~s~~v 239 (262)
+|-.+
T Consensus 275 vsDm~ 279 (375)
T 4auk_A 275 VCDMV 279 (375)
T ss_dssp EECCS
T ss_pred EEcCC
Confidence 98654
No 283
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.80 E-value=4.6e-05 Score=69.16 Aligned_cols=171 Identities=15% Similarity=0.126 Sum_probs=83.4
Q ss_pred CCCCceeecccCCCCCccCCHHHHHHHHhccccchhhhhhHh--HhhHHhhhh-ccchhhccc------cCCCCCCcccc
Q 024811 64 KESSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQQEKKTQW--YREGISYWE-GVEASVDGV------LGGFGNVNEVD 134 (262)
Q Consensus 64 ~~~~~~~~~g~d~~g~ef~s~~e~W~~~~~~~~~~~~~~~~w--y~~~~~yW~-~~~~~~dgv------lgGy~~is~~d 134 (262)
.++|.+ -+|+..-|-...++.+.||+++.. -.+..| |... .-++ ......+.+ -|+| .|.
T Consensus 10 ~~~~~~-~~~~~rg~~~g~tlG~~wK~~LN~-----l~k~~F~~Yk~~-gi~Evdr~~ar~~l~~g~~~~g~y--~SR-- 78 (321)
T 3lkz_A 10 HSSGLV-PRGSHMGGAKGRTLGEVWKERLNQ-----MTKEEFTRYRKE-AIIEVDRSAAKHARKEGNVTGGHP--VSR-- 78 (321)
T ss_dssp -----------------CCSHHHHHHHHHTT-----SCHHHHHHHTTT-TCEEECCHHHHHHHHHTCCSSCCC--SST--
T ss_pred cccCcc-cccCcCCCCCCCchHHHHHHHHhc-----cCHHHHHHHhhc-CceeechHHHHHHHhcCcCcCCCc--cch--
Confidence 344444 456655566677999999999987 223333 2211 0011 010011111 1222 222
Q ss_pred hhhHHHHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHhhcccccccCCCCCcc
Q 024811 135 IKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKA 213 (262)
Q Consensus 135 i~~s~~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~-~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~ 213 (262)
+..-|..+....+ +.++.+|||+||++|..+...+.+.+ ..|.++|.-...-+. +...+ +-....
T Consensus 79 ---~~~KL~ei~~~~~----l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~------ql~w~l 144 (321)
T 3lkz_A 79 ---GTAKLRWLVERRF----LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQ------SYGWNI 144 (321)
T ss_dssp ---HHHHHHHHHHTTS----CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCC------BTTGGG
T ss_pred ---HHHHHHHHHHhcC----CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhh------hcCCcc
Confidence 2222555555432 45678999999999999998885543 468888875542210 00000 112345
Q ss_pred eEEEEc-CCCCCCCCCCccchhhhhhHHhhcCchhH-----HHHHHHHHhhccCC
Q 024811 214 TNFFCV-PLQDFTPETGRYDVIWVQWCIGHLTDDDF-----VSFFKRAKVNHSQT 262 (262)
Q Consensus 214 v~f~~~-d~~~~~~~~~~yDlI~s~~vl~hltD~el-----~~~l~~~~~~LkPG 262 (262)
+.|... |+..+++ .++|+|+|--. .--+++++ ..+|.-+.+.|++|
T Consensus 145 V~~~~~~Dv~~l~~--~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~ 196 (321)
T 3lkz_A 145 VTMKSGVDVFYRPS--ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRG 196 (321)
T ss_dssp EEEECSCCTTSSCC--CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEeccCHhhCCC--CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccC
Confidence 778776 8877765 47999998643 22222221 12555556666654
No 284
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.80 E-value=2.2e-05 Score=73.65 Aligned_cols=81 Identities=11% Similarity=0.075 Sum_probs=53.9
Q ss_pred CceeeEeeccccHHHHHHHHh-------------c---CC--cEEEEeCC-----------HHHHHHHHhhcccccccCC
Q 024811 158 HLVALDCGSGIGRITKNLLIR-------------Y---FN--EVDLLEPV-----------SHFLDAARESLAPENHMAP 208 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~-------------~---~~--~V~~VD~s-----------~~mld~Ar~~l~~a~~~~~ 208 (262)
..+|+|+||++|..|..++.. . .+ +|..-|+. +.+.+.+++....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 578999999999999988855 1 12 35556777 6666655443211
Q ss_pred CCCcceEEEEcCCCCC---CCCCCccchhhhhhHHhhcCch
Q 024811 209 DMHKATNFFCVPLQDF---TPETGRYDVIWVQWCIGHLTDD 246 (262)
Q Consensus 209 ~~~~~v~f~~~d~~~~---~~~~~~yDlI~s~~vl~hltD~ 246 (262)
.....|+.+.-..| .++.+++|+|+|+++|||+++.
T Consensus 127 --~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~ 165 (384)
T 2efj_A 127 --KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQV 165 (384)
T ss_dssp --CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSS
T ss_pred --CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCC
Confidence 01235555555444 2345799999999999999864
No 285
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.78 E-value=2.3e-05 Score=76.57 Aligned_cols=101 Identities=14% Similarity=0.004 Sum_probs=73.5
Q ss_pred CCceeeEeeccccHHHHHHHHhc----CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC--C-CCCC
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY----FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--T-PETG 229 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~----~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~--~-~~~~ 229 (262)
++.+|+|.+||+|.+...++... ..++.++|.++.++..|+.++.... ....+..+.++|.... + ....
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g----i~~~~~~I~~gDtL~~d~p~~~~~ 296 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG----VPIENQFLHNADTLDEDWPTQEPT 296 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT----CCGGGEEEEESCTTTSCSCCSSCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC----CCcCccceEecceecccccccccc
Confidence 46799999999999999888442 3579999999999999998875421 0113578899998755 2 2246
Q ss_pred ccchhhhhhHHhhcC--------c--------------hhHHHHHHHHHhhcc-CC
Q 024811 230 RYDVIWVQWCIGHLT--------D--------------DDFVSFFKRAKVNHS-QT 262 (262)
Q Consensus 230 ~yDlI~s~~vl~hlt--------D--------------~el~~~l~~~~~~Lk-PG 262 (262)
+||+|++|.++..-. + .+ -.|+..+.+.|+ ||
T Consensus 297 ~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~g 351 (542)
T 3lkd_A 297 NFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQDN 351 (542)
T ss_dssp CBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTTT
T ss_pred cccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCCc
Confidence 899999997653210 1 11 148999999999 75
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.77 E-value=2.7e-05 Score=79.24 Aligned_cols=82 Identities=13% Similarity=0.105 Sum_probs=55.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcC----CcEEEEeCCHHHHHHH--HhhcccccccCCCCCcceEEEEcCCCCCCC-CCC
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF----NEVDLLEPVSHFLDAA--RESLAPENHMAPDMHKATNFFCVPLQDFTP-ETG 229 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~----~~V~~VD~s~~mld~A--r~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~ 229 (262)
++.+|||.|||+|.+...++.... .++.++|.++.+++.| +.++..... ........+...|+.+..+ ...
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~L--lhGi~~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQL--VSSNNAPTITGEDVCSLNPEDFA 398 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTT--CBTTBCCEEECCCGGGCCGGGGT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhh--hcCCCcceEEecchhcccccccC
Confidence 467999999999999999994332 3699999999999999 544422000 0111223555666655321 236
Q ss_pred ccchhhhhhHH
Q 024811 230 RYDVIWVQWCI 240 (262)
Q Consensus 230 ~yDlI~s~~vl 240 (262)
+||+|++|.++
T Consensus 399 kFDVVIgNPPY 409 (878)
T 3s1s_A 399 NVSVVVMNPPY 409 (878)
T ss_dssp TEEEEEECCBC
T ss_pred CCCEEEECCCc
Confidence 89999999875
No 287
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.70 E-value=2.7e-05 Score=70.59 Aligned_cols=98 Identities=11% Similarity=-0.029 Sum_probs=57.0
Q ss_pred CCCCceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEc--CCCCCCCCCCcc
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV--PLQDFTPETGRY 231 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~--d~~~~~~~~~~y 231 (262)
..++.+|||+||++|..+..++... ...|+++|.+..+...... .. ....++..... |+..+. .++|
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~-------~~~~~iv~~~~~~di~~l~--~~~~ 148 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQ-------TLGWNIVKFKDKSNVFTMP--TEPS 148 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CC-------BTTGGGEEEECSCCTTTSC--CCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-cc-------ccCCceEEeecCceeeecC--CCCc
Confidence 3467899999999999999999432 3468888886543111000 00 00112222333 344443 3689
Q ss_pred chhhhhhHHh---hcCchh-HHHHHHHHHhhccCC
Q 024811 232 DVIWVQWCIG---HLTDDD-FVSFFKRAKVNHSQT 262 (262)
Q Consensus 232 DlI~s~~vl~---hltD~e-l~~~l~~~~~~LkPG 262 (262)
|+|+|..+-+ +..|.. ...+|.-+.++|+||
T Consensus 149 DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG 183 (300)
T 3eld_A 149 DTLLCDIGESSSNPLVERDRTMKVLENFERWKHVN 183 (300)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTT
T ss_pred CEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999965433 111221 124577888899987
No 288
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.69 E-value=1.7e-05 Score=74.34 Aligned_cols=106 Identities=11% Similarity=0.002 Sum_probs=73.3
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccC--CCCCcceEEEEcCCCCCC----CCCCc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMA--PDMHKATNFFCVPLQDFT----PETGR 230 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~--~~~~~~v~f~~~d~~~~~----~~~~~ 230 (262)
++.+||=||.|.|.+.+.+++....+|++||+++..++.|++.+....... .-..++++++..|..+|- ...++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 357999999999999999995456789999999999999999875321110 001235788888887652 12358
Q ss_pred cchhhhhhH-------HhhcCchhH-HHHHHHHHhhccCC
Q 024811 231 YDVIWVQWC-------IGHLTDDDF-VSFFKRAKVNHSQT 262 (262)
Q Consensus 231 yDlI~s~~v-------l~hltD~el-~~~l~~~~~~LkPG 262 (262)
||+|+.-.. -.+.....+ .+|++.|++.|+||
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~ 324 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQD 324 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCC
Confidence 999997521 122222233 36999999999985
No 289
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.61 E-value=2e-05 Score=76.91 Aligned_cols=99 Identities=9% Similarity=-0.142 Sum_probs=68.7
Q ss_pred CceeeEeeccccHHHHHHHHhc----------------CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCC
Q 024811 158 HLVALDCGSGIGRITKNLLIRY----------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL 221 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~----------------~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~ 221 (262)
..+|||.+||+|.+...++... ..++.++|.++.++..|+.++.... ...++.+.++|.
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-----i~~~i~i~~gDt 319 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG-----IDFNFGKKNADS 319 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT-----CCCBCCSSSCCT
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC-----CCcccceeccch
Confidence 3499999999999988775221 2368999999999999999875421 111233467776
Q ss_pred CCCCC-CCCccchhhhhhHHhh-------------------------cCc---hhHHHHHHHHHhhccCC
Q 024811 222 QDFTP-ETGRYDVIWVQWCIGH-------------------------LTD---DDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 222 ~~~~~-~~~~yDlI~s~~vl~h-------------------------ltD---~el~~~l~~~~~~LkPG 262 (262)
...+. ...+||+|++|.++.. ++. .+ ..|+..+.+.|+||
T Consensus 320 L~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~-~~Fl~~~l~~Lk~g 388 (544)
T 3khk_A 320 FLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNAN-FAWMLHMLYHLAPT 388 (544)
T ss_dssp TTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTH-HHHHHHHHHTEEEE
T ss_pred hcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchh-HHHHHHHHHHhccC
Confidence 54432 2368999999987653 111 11 15899999999885
No 290
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.60 E-value=3.9e-05 Score=68.34 Aligned_cols=107 Identities=11% Similarity=-0.028 Sum_probs=58.6
Q ss_pred HHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEc
Q 024811 142 LQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV 219 (262)
Q Consensus 142 L~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~ 219 (262)
|..+..+.+ ++++.+|||+||++|..+...+ +. ...|.+.... ++. . ....... ......+.|.++
T Consensus 62 L~EIdeK~l----ikpg~~VVDLGaAPGGWSQvAa-~~~~vg~V~G~vig---~D~-~-~~P~~~~--~~Gv~~i~~~~G 129 (269)
T 2px2_A 62 LRWLVERRF----VQPIGKVVDLGCGRGGWSYYAA-TMKNVQEVRGYTKG---GPG-H-EEPMLMQ--SYGWNIVTMKSG 129 (269)
T ss_dssp HHHHHHTTS----CCCCEEEEEETCTTSHHHHHHT-TSTTEEEEEEECCC---STT-S-CCCCCCC--STTGGGEEEECS
T ss_pred HHHHHHcCC----CCCCCEEEEcCCCCCHHHHHHh-hhcCCCCceeEEEc---ccc-c-cCCCccc--CCCceEEEeecc
Confidence 555554433 4578999999999999999999 43 2233444332 221 0 0000000 001123355546
Q ss_pred -CCCCCCCCCCccchhhhhhH---HhhcCchh-HHHHHHHHHhhccCC
Q 024811 220 -PLQDFTPETGRYDVIWVQWC---IGHLTDDD-FVSFFKRAKVNHSQT 262 (262)
Q Consensus 220 -d~~~~~~~~~~yDlI~s~~v---l~hltD~e-l~~~l~~~~~~LkPG 262 (262)
|+.+..+ .++|+|+|-.. =+...|.. ...+|.-+.++|+||
T Consensus 130 ~Df~~~~~--~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~g 175 (269)
T 2px2_A 130 VDVFYKPS--EISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRG 175 (269)
T ss_dssp CCGGGSCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCccCCCC--CCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcC
Confidence 8887543 47999998542 11222221 112677777888886
No 291
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.55 E-value=4.7e-05 Score=70.85 Aligned_cols=101 Identities=16% Similarity=0.104 Sum_probs=71.0
Q ss_pred CCceeeEeeccccHHHHHHHHh---------------cCC--cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEc
Q 024811 157 QHLVALDCGSGIGRITKNLLIR---------------YFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV 219 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~---------------~~~--~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~ 219 (262)
...+|+|+||++|..|..++.. ..+ +|...|+........-+.+..-.. .....|+.+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~-----~~~~~f~~g 125 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND-----VDGVCFING 125 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCS-----CTTCEEEEE
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcc-----cCCCEEEEe
Confidence 3578999999999988876633 123 466779999888888887753210 012245444
Q ss_pred CCCCC---CCCCCccchhhhhhHHhhcCc-h------------------------------hHHHHHHHHHhhccCC
Q 024811 220 PLQDF---TPETGRYDVIWVQWCIGHLTD-D------------------------------DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 220 d~~~~---~~~~~~yDlI~s~~vl~hltD-~------------------------------el~~~l~~~~~~LkPG 262 (262)
....| .++.+++|+|+|+++|||+++ + |+..||+.-++.|+||
T Consensus 126 vpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pG 202 (359)
T 1m6e_X 126 VPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPG 202 (359)
T ss_dssp EESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTT
T ss_pred cchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33333 234579999999999999976 1 4556799999999997
No 292
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.54 E-value=2.9e-05 Score=68.89 Aligned_cols=104 Identities=12% Similarity=0.115 Sum_probs=64.8
Q ss_pred CCceeeEeeccccHHHHHHHHhc------CC-------cEEEEeCCH---HHHH-----------HHHhhccccccc---
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY------FN-------EVDLLEPVS---HFLD-----------AARESLAPENHM--- 206 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~------~~-------~V~~VD~s~---~mld-----------~Ar~~l~~a~~~--- 206 (262)
+..+|||+|+|+|..+..++... .+ +++.+|..| +++. .|++.+......
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 35799999999999998877332 22 678889776 5555 455544321000
Q ss_pred -----CCCCCcceEEEEcCCCCCCCC-C----Cccchhhhh-hHHhhcCchhH--HHHHHHHHhhccCC
Q 024811 207 -----APDMHKATNFFCVPLQDFTPE-T----GRYDVIWVQ-WCIGHLTDDDF--VSFFKRAKVNHSQT 262 (262)
Q Consensus 207 -----~~~~~~~v~f~~~d~~~~~~~-~----~~yDlI~s~-~vl~hltD~el--~~~l~~~~~~LkPG 262 (262)
......+++++.+|+.+.-+. + .+||+|+.- ++-.. ++++ ..+|+.+.+.|+||
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~--~p~lw~~~~l~~l~~~L~pG 206 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAK--NPDMWTQNLFNAMARLARPG 206 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTT--CGGGCCHHHHHHHHHHEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCccc--ChhhcCHHHHHHHHHHcCCC
Confidence 011224678899998774221 1 279999874 22111 2221 37999999999986
No 293
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.51 E-value=0.00014 Score=65.16 Aligned_cols=46 Identities=26% Similarity=0.194 Sum_probs=41.8
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE 203 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a 203 (262)
++..|||++||+|.++..++ ..+.++.++|.++.+++.|++++..+
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~-~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAA-RWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHH-HcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 57899999999999999988 77889999999999999999998653
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.43 E-value=7.5e-05 Score=65.94 Aligned_cols=84 Identities=12% Similarity=0.027 Sum_probs=56.1
Q ss_pred HHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEc-
Q 024811 142 LQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV- 219 (262)
Q Consensus 142 L~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~~-~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~- 219 (262)
|..+..+.+ +.++.+|||+||++|..+...+.+.+ ..|.++|.-...-+. +... .+-....+.|.++
T Consensus 67 L~ei~ek~~----l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~------~s~gwn~v~fk~gv 135 (267)
T 3p8z_A 67 LQWFVERNM----VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPM------STYGWNIVKLMSGK 135 (267)
T ss_dssp HHHHHHTTS----SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCC------CCTTTTSEEEECSC
T ss_pred HHHHHHhcC----CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchh------hhcCcCceEEEecc
Confidence 555555432 45678999999999999998885543 468888765443310 0011 1123467899988
Q ss_pred CCCCCCCCCCccchhhhhh
Q 024811 220 PLQDFTPETGRYDVIWVQW 238 (262)
Q Consensus 220 d~~~~~~~~~~yDlI~s~~ 238 (262)
|+...++ .++|+|+|-.
T Consensus 136 Dv~~~~~--~~~DtllcDI 152 (267)
T 3p8z_A 136 DVFYLPP--EKCDTLLCDI 152 (267)
T ss_dssp CGGGCCC--CCCSEEEECC
T ss_pred ceeecCC--ccccEEEEec
Confidence 8866655 5799999864
No 295
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.10 E-value=0.00065 Score=62.95 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=49.4
Q ss_pred CceeeEeeccccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC
Q 024811 158 HLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~ 225 (262)
+..|||||.|+|.+|..|+... ..+|++||+++.++...++.+. ..++.++.+|+.++.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~---------~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE---------GSPLQILKRDPYDWS 118 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT---------TSSCEEECSCTTCHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc---------CCCEEEEECCccchh
Confidence 4789999999999999999432 5689999999999999988762 237899999997763
No 296
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.61 E-value=0.00022 Score=80.54 Aligned_cols=95 Identities=11% Similarity=0.053 Sum_probs=49.7
Q ss_pred CCceeeEeeccccHHHHHHHHhc------CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC-CCCCC
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETG 229 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~------~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~-~~~~~ 229 (262)
+..+|||||+|+|..+..++... +.+++..|+|+.+.+.|++++... .+..-..|.++. .+...
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---------di~~~~~d~~~~~~~~~~ 1310 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---------HVTQGQWDPANPAPGSLG 1310 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---------TEEEECCCSSCCCC----
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---------ccccccccccccccCCCC
Confidence 46799999999999888777432 236899999999999988886421 222211233322 11235
Q ss_pred ccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 230 ~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.||+|+++.++|-..+.+ ..|.+++++|+||
T Consensus 1311 ~ydlvia~~vl~~t~~~~--~~l~~~~~lL~p~ 1341 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDPA--VAVGNMAATLKEG 1341 (2512)
T ss_dssp -CCEEEEECC----------------------C
T ss_pred ceeEEEEcccccccccHH--HHHHHHHHhcCCC
Confidence 799999999997666666 8999999999997
No 297
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.53 E-value=0.0046 Score=54.11 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=41.1
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAP 202 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~ 202 (262)
++..|||..||+|..+.... ..+.++.++|.++.+++.|++++..
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~-~~gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAK-KLGRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCHHHHHHH-HcCCeEEEEeCCHHHHHHHHHHHHh
Confidence 57899999999999999888 7788999999999999999999853
No 298
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.32 E-value=0.0083 Score=58.21 Aligned_cols=107 Identities=14% Similarity=0.019 Sum_probs=70.8
Q ss_pred HHHHHHhhccCCCccCCCCceeeEeeccccHHHHHHHHhc--------------CCcEEEEeCCHHHHHHHHhhcccccc
Q 024811 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY--------------FNEVDLLEPVSHFLDAARESLAPENH 205 (262)
Q Consensus 140 ~fL~~ll~~~l~~~~~~~~~~VLDlGcGtG~lt~~La~~~--------------~~~V~~VD~s~~mld~Ar~~l~~a~~ 205 (262)
.++..++. ..++.+|+|-.||+|.+........ -..+.++|.++.+...|+-++...
T Consensus 207 ~lmv~l~~-------p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh-- 277 (530)
T 3ufb_A 207 RFMVEVMD-------PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH-- 277 (530)
T ss_dssp HHHHHHHC-------CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH--
T ss_pred HHHHHhhc-------cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc--
Confidence 45555554 2346799999999999987665221 135899999999999999876432
Q ss_pred cCCCCCcceEEEEcCCCCCCC----CCCccchhhhhhHHhhcC---------------chhHHHHHHHHHhhcc
Q 024811 206 MAPDMHKATNFFCVPLQDFTP----ETGRYDVIWVQWCIGHLT---------------DDDFVSFFKRAKVNHS 260 (262)
Q Consensus 206 ~~~~~~~~v~f~~~d~~~~~~----~~~~yDlI~s~~vl~hlt---------------D~el~~~l~~~~~~Lk 260 (262)
.....++.++|....+. ...+||+|++|.++.--. +.+ ..|+..+...|+
T Consensus 278 ----g~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~-~~Fl~~~l~~Lk 346 (530)
T 3ufb_A 278 ----GLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETA-MLFLQLIMRKLK 346 (530)
T ss_dssp ----TCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHH-HHHHHHHHHHBC
T ss_pred ----CCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhH-HHHHHHHHHHhh
Confidence 12234667777665432 125799999998764211 111 247788888886
No 299
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.17 E-value=0.0055 Score=56.78 Aligned_cols=107 Identities=11% Similarity=0.011 Sum_probs=72.6
Q ss_pred CCCCceeeEeeccccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-CCCcc
Q 024811 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRY 231 (262)
Q Consensus 155 ~~~~~~VLDlGcGtG~lt~~La~~~~~--~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-~~~~y 231 (262)
..++.+|||+.||+|.=|..|+ .... .|+++|.|+.-+...++++............++.+...|...+.. ..+.|
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la-~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALL-QTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHH-HTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCEEEEecCCccHHHHHHH-HhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 4468899999999999999999 5544 689999999999999988864322111122467788888776532 23589
Q ss_pred chhhh----hhH-Hh----------hcCchh------H-HHHHHHHHhhccCC
Q 024811 232 DVIWV----QWC-IG----------HLTDDD------F-VSFFKRAKVNHSQT 262 (262)
Q Consensus 232 DlI~s----~~v-l~----------hltD~e------l-~~~l~~~~~~LkPG 262 (262)
|.|++ +.. +. ..+..+ + .++|.++.++||||
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpG 277 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPG 277 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEE
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99985 221 11 111111 1 25788888899886
No 300
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=95.74 E-value=0.0063 Score=54.59 Aligned_cols=98 Identities=9% Similarity=-0.035 Sum_probs=65.4
Q ss_pred CCceeeEeeccccHHHHHHHHhc------CCcEEEEeCCHH--------------------------HHHHHHhhccccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSH--------------------------FLDAARESLAPEN 204 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~------~~~V~~VD~s~~--------------------------mld~Ar~~l~~a~ 204 (262)
.+++|||||+.+|..+..++.-. ..+|.++|..+. .++.+++++..+.
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 36799999999999998876321 356888886421 4677888876542
Q ss_pred ccCCCCCcceEEEEcCCCCCCCC--CCccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 205 HMAPDMHKATNFFCVPLQDFTPE--TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 205 ~~~~~~~~~v~f~~~d~~~~~~~--~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
- ...+++++.+++.+.-+. .++||+|..-.-. | .....+|..+...|+||
T Consensus 186 l----~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-y---~~~~~~Le~~~p~L~pG 237 (282)
T 2wk1_A 186 L----LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-Y---ESTWDTLTNLYPKVSVG 237 (282)
T ss_dssp C----CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS-H---HHHHHHHHHHGGGEEEE
T ss_pred C----CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-c---ccHHHHHHHHHhhcCCC
Confidence 1 125799999988664321 2579988765321 1 11235788888888876
No 301
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.61 E-value=0.011 Score=54.79 Aligned_cols=70 Identities=14% Similarity=0.021 Sum_probs=55.8
Q ss_pred ceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--------CCCc
Q 024811 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--------ETGR 230 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~--------~~~~ 230 (262)
.++||+-||.|.++..|....+..|.++|.++..++..+.|.. ...++++|+.++.. ....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~-----------~~~~~~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP-----------RSLHVQEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT-----------TSEEECCCGGGCCHHHHHHHHCSCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC-----------CCceEecChhhcCHHHHHhhcccCCC
Confidence 4799999999999999996666677899999999999998863 34677888887743 1247
Q ss_pred cchhhhhhH
Q 024811 231 YDVIWVQWC 239 (262)
Q Consensus 231 yDlI~s~~v 239 (262)
+|+|+....
T Consensus 72 ~D~i~ggpP 80 (376)
T 3g7u_A 72 IDGIIGGPP 80 (376)
T ss_dssp CCEEEECCC
T ss_pred eeEEEecCC
Confidence 999996553
No 302
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.45 E-value=0.0044 Score=56.72 Aligned_cols=70 Identities=17% Similarity=0.183 Sum_probs=55.3
Q ss_pred ceeeEeeccccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC---Cccch
Q 024811 159 LVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---GRYDV 233 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~---~~yDl 233 (262)
.+|||+-||+|.++..+.... +..|.++|.++.+++..+.|.. ...++++|+.++.+.. ..+|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----------~~~~~~~Di~~~~~~~~~~~~~D~ 71 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----------HTQLLAKTIEGITLEEFDRLSFDM 71 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----------TSCEECSCGGGCCHHHHHHHCCSE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----------ccccccCCHHHccHhHcCcCCcCE
Confidence 579999999999999999544 3578999999999999999874 2347788888875321 15899
Q ss_pred hhhhhH
Q 024811 234 IWVQWC 239 (262)
Q Consensus 234 I~s~~v 239 (262)
|+....
T Consensus 72 l~~gpP 77 (343)
T 1g55_A 72 ILMSPP 77 (343)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 998764
No 303
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.19 E-value=0.027 Score=51.45 Aligned_cols=102 Identities=10% Similarity=0.101 Sum_probs=71.4
Q ss_pred CceeeEeeccccHHHHHHHHhcCCcEEEEeCC-HHHHHHHHhhccccccc----C-----C------CCCcceEEEEcCC
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPV-SHFLDAARESLAPENHM----A-----P------DMHKATNFFCVPL 221 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s-~~mld~Ar~~l~~a~~~----~-----~------~~~~~v~f~~~d~ 221 (262)
...|+.+|||.....-.|... ++.+..+|.+ |+.++.-++.+...... . . ....+..++.+|+
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~-~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQM-FPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHH-CTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCc-CCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 568999999999999999943 4456666555 77777766665432100 0 0 0014678899999
Q ss_pred CCCC---------CCCCccchhhhhhHHhhcCchhHHHHHHHHHhhcc
Q 024811 222 QDFT---------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHS 260 (262)
Q Consensus 222 ~~~~---------~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~Lk 260 (262)
.+.. +......++++-.+++||+.++..++|+.+.....
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~ 224 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKFS 224 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCC
Confidence 8731 12245678888889999999998899999988664
No 304
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=95.18 E-value=0.026 Score=52.00 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=59.3
Q ss_pred CCCceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC---C---
Q 024811 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---E--- 227 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~---~--- 227 (262)
.+++.++|+.||.|..|..|+...+ .+|.++|.++.+++.|+ ++. ..++.++.+++.++.. .
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~---------~~Rv~lv~~nF~~l~~~L~~~g~ 125 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID---------DPRFSIIHGPFSALGEYVAERDL 125 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC---------CTTEEEEESCGGGHHHHHHHTTC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc---------CCcEEEEeCCHHHHHHHHHhcCC
Confidence 4678999999999999999995443 37999999999999995 552 2367888888776521 0
Q ss_pred CCccchhhhhh--HHhhcCchh
Q 024811 228 TGRYDVIWVQW--CIGHLTDDD 247 (262)
Q Consensus 228 ~~~yDlI~s~~--vl~hltD~e 247 (262)
.+++|.|+... +-+++.+++
T Consensus 126 ~~~vDgILfDLGVSS~QlD~~e 147 (347)
T 3tka_A 126 IGKIDGILLDLGVSSPQLDDAE 147 (347)
T ss_dssp TTCEEEEEEECSCCHHHHHCGG
T ss_pred CCcccEEEECCccCHHHhcCCC
Confidence 12577777653 345666554
No 305
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.05 E-value=0.024 Score=53.02 Aligned_cols=47 Identities=23% Similarity=0.295 Sum_probs=40.0
Q ss_pred CCCceeeEeeccccHHHHHHHH-hcC--CcEEEEeCCHHHHHHHHhhccc
Q 024811 156 NQHLVALDCGSGIGRITKNLLI-RYF--NEVDLLEPVSHFLDAARESLAP 202 (262)
Q Consensus 156 ~~~~~VLDlGcGtG~lt~~La~-~~~--~~V~~VD~s~~mld~Ar~~l~~ 202 (262)
.++..++||||++|..+..++. ... .+|.++||+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4678999999999999999883 332 5899999999999999998754
No 306
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.36 E-value=0.025 Score=51.44 Aligned_cols=68 Identities=13% Similarity=0.000 Sum_probs=51.9
Q ss_pred CceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC-Cccchhhh
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDVIWV 236 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~-~~yDlI~s 236 (262)
..++||+-||+|.++..+....+..|.++|.++..++..+.+.... . ++|+.++.+.. ..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~----------~---~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK----------P---EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC----------C---BSCGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC----------C---cCCHHHcCHhhCCCCCEEEE
Confidence 4689999999999999999555677889999999999999987431 1 46666654321 35888887
Q ss_pred hh
Q 024811 237 QW 238 (262)
Q Consensus 237 ~~ 238 (262)
..
T Consensus 78 gp 79 (327)
T 2c7p_A 78 GF 79 (327)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 307
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=94.03 E-value=0.016 Score=52.15 Aligned_cols=76 Identities=13% Similarity=-0.027 Sum_probs=61.1
Q ss_pred CceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC----CCCCCccch
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPETGRYDV 233 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~----~~~~~~yDl 233 (262)
+..+||+=+|+|.++..++ +.+.++.+||.++..++..++++.. ..++.++..|.... .++..+||+
T Consensus 92 ~~~~LDlfaGSGaLgiEaL-S~~d~~vfvE~~~~a~~~L~~Nl~~--------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQL-RSQDRLYLCELHPTEYNFLLKLPHF--------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSCCEEECHHHHHHHHS-CTTSEEEEECCSHHHHHHHTTSCCT--------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred CCCceeEeCCcHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHhCc--------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 4579999999999999999 5678999999999999999999853 24688888885442 233357999
Q ss_pred hhhhhHHhh
Q 024811 234 IWVQWCIGH 242 (262)
Q Consensus 234 I~s~~vl~h 242 (262)
|++-.+...
T Consensus 163 VfiDPPYe~ 171 (283)
T 2oo3_A 163 IFIDPSYER 171 (283)
T ss_dssp EEECCCCCS
T ss_pred EEECCCCCC
Confidence 998877553
No 308
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=93.79 E-value=0.2 Score=45.21 Aligned_cols=99 Identities=10% Similarity=-0.055 Sum_probs=68.3
Q ss_pred ceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC---------CCC
Q 024811 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---------ETG 229 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~---------~~~ 229 (262)
..|+++|||.=.....|.......|.=|| -|..++..++.+..... ....+..++.+|+.+ .. ...
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~---~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGV---TPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTC---CCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCC---CCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 46999999998877666521123566667 48889888888853211 113467888999976 21 112
Q ss_pred ccchhhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 230 ~yDlI~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.-=++++-.+++|+++++...+|+.+...+.||
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~g 211 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVG 211 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTT
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCC
Confidence 233455667899999998889999999988776
No 309
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.53 E-value=0.25 Score=44.46 Aligned_cols=46 Identities=11% Similarity=-0.036 Sum_probs=41.1
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE 203 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a 203 (262)
++..|||.=||+|..+.... +.+.+..++|+++.+++.+++++..+
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~-~~gr~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAE-RESRKWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHH-HTTCEEEEEESCHHHHHHHHGGGSCS
T ss_pred CCCEEEECCCCCCHHHHHHH-HcCCCEEEEeCCHHHHHHHHHHHHhc
Confidence 57899999999999888777 77889999999999999999998643
No 310
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=90.98 E-value=0.12 Score=47.04 Aligned_cols=70 Identities=9% Similarity=0.035 Sum_probs=53.1
Q ss_pred CCceeeEeeccccHHHHHHHHhcC--CcE-EEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC---Cc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF--NEV-DLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---GR 230 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~--~~V-~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~---~~ 230 (262)
...+++|+-||.|.++.-|....+ ..| .++|.++..++.-+.|... .+++.|+.++.+.. ..
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~------------~~~~~DI~~~~~~~i~~~~ 76 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE------------EVQVKNLDSISIKQIESLN 76 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC------------CCBCCCTTTCCHHHHHHTC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC------------CcccCChhhcCHHHhccCC
Confidence 356899999999999999984332 556 7999999999999998742 15678888875421 25
Q ss_pred cchhhhhh
Q 024811 231 YDVIWVQW 238 (262)
Q Consensus 231 yDlI~s~~ 238 (262)
+|+|+...
T Consensus 77 ~Dil~ggp 84 (327)
T 3qv2_A 77 CNTWFMSP 84 (327)
T ss_dssp CCEEEECC
T ss_pred CCEEEecC
Confidence 89998654
No 311
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=89.20 E-value=0.57 Score=42.25 Aligned_cols=46 Identities=11% Similarity=0.067 Sum_probs=39.5
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCcEEEEeCCH---HHHHHHHhhcccc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPE 203 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~---~mld~Ar~~l~~a 203 (262)
++..|||.=||+|..+.... ..+.+..++|+++ .+++.+++++..+
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~-~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAI-QEGRNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHH-HHTCEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCEEEecCCCCCHHHHHHH-HcCCcEEEEECCccHHHHHHHHHHHHHHc
Confidence 57899999999999888887 7788899999999 9999999998643
No 312
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=88.88 E-value=0.14 Score=46.68 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=52.9
Q ss_pred CceeeEeeccccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC---Cccc
Q 024811 158 HLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---GRYD 232 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~--~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~---~~yD 232 (262)
..+++|+=||.|.++.-|....+ ..|.++|.++..++.-+.|.. ...+++.|+.++.+.. ..+|
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----------~~~~~~~DI~~~~~~~~~~~~~D 71 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----------ETNLLNRNIQQLTPQVIKKWNVD 71 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----------TSCEECCCGGGCCHHHHHHTTCC
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----------CCceeccccccCCHHHhccCCCC
Confidence 35899999999999999984433 557899999999999999864 2346678887775421 2589
Q ss_pred hhhhhh
Q 024811 233 VIWVQW 238 (262)
Q Consensus 233 lI~s~~ 238 (262)
+|+..+
T Consensus 72 ~l~ggp 77 (333)
T 4h0n_A 72 TILMSP 77 (333)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 888654
No 313
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=88.25 E-value=0.65 Score=43.31 Aligned_cols=45 Identities=24% Similarity=0.301 Sum_probs=36.3
Q ss_pred CCceeeEeeccccHHHHHHHHhc--C------CcEEEEeCCHHHHHHHHhhcc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--F------NEVDLLEPVSHFLDAARESLA 201 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~------~~V~~VD~s~~mld~Ar~~l~ 201 (262)
.+..|+|+|+|.|.++..++... . .++.+||+|+...+.-++++.
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 45689999999999999988321 1 268999999999998887764
No 314
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=87.96 E-value=0.31 Score=43.67 Aligned_cols=71 Identities=11% Similarity=0.001 Sum_probs=53.9
Q ss_pred CCceeeEeeccccHHHHHHHHhcCCc--EEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC----Cc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET----GR 230 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~~~--V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~----~~ 230 (262)
...+++|+=||.|.++..|....+.. |.++|.++..++.-+.+.. ...++..|+.++.... +.
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~-----------~~~~~~~DI~~i~~~~i~~~~~ 83 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ-----------GKIMYVGDVRSVTQKHIQEWGP 83 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT-----------TCEEEECCGGGCCHHHHHHTCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC-----------CCceeCCChHHccHHHhcccCC
Confidence 46799999999999999998444444 5889999999998888753 2357788888875321 36
Q ss_pred cchhhhhh
Q 024811 231 YDVIWVQW 238 (262)
Q Consensus 231 yDlI~s~~ 238 (262)
+|+|+...
T Consensus 84 ~Dll~ggp 91 (295)
T 2qrv_A 84 FDLVIGGS 91 (295)
T ss_dssp CSEEEECC
T ss_pred cCEEEecC
Confidence 89998654
No 315
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=87.39 E-value=0.33 Score=44.12 Aligned_cols=85 Identities=11% Similarity=0.123 Sum_probs=52.8
Q ss_pred CCCceeeEeec------cccHHHHHHHHhcCC---cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC
Q 024811 156 NQHLVALDCGS------GIGRITKNLLIRYFN---EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP 226 (262)
Q Consensus 156 ~~~~~VLDlGc------GtG~lt~~La~~~~~---~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~ 226 (262)
+.+.+|||+|| -+|.. ++++..+ .|..+|+.+-- .... .++++|..+...
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~---VLr~~~p~g~~VVavDL~~~~-----------------sda~-~~IqGD~~~~~~ 166 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA---VLRQWLPTGTLLVDSDLNDFV-----------------SDAD-STLIGDCATVHT 166 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH---HHHHHSCTTCEEEEEESSCCB-----------------CSSS-EEEESCGGGEEE
T ss_pred cCCCEEEeCCCCCCCCCCCcHH---HHHHhCCCCcEEEEeeCcccc-----------------cCCC-eEEEcccccccc
Confidence 45789999996 77873 3323333 57777764321 0112 558999876654
Q ss_pred CCCccchhhhhh---HHhhcCchh-----HH-HHHHHHHhhccCC
Q 024811 227 ETGRYDVIWVQW---CIGHLTDDD-----FV-SFFKRAKVNHSQT 262 (262)
Q Consensus 227 ~~~~yDlI~s~~---vl~hltD~e-----l~-~~l~~~~~~LkPG 262 (262)
. ++||+|+|-. ...+..-+. +. .++.-+.+.|+||
T Consensus 167 ~-~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpG 210 (344)
T 3r24_A 167 A-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALG 210 (344)
T ss_dssp S-SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEE
T ss_pred C-CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCC
Confidence 3 6899999854 234432222 33 4777788889886
No 316
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=86.06 E-value=0.55 Score=41.69 Aligned_cols=67 Identities=10% Similarity=0.006 Sum_probs=52.8
Q ss_pred eeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCC-Cccchhhhhh
Q 024811 160 VALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDVIWVQW 238 (262)
Q Consensus 160 ~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~-~~yDlI~s~~ 238 (262)
+|||+=||.|.++.-|-...+.-|-++|.++.+++.-+.+.. ..++++|+.++.... ...|+|+...
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~------------~~~~~~DI~~i~~~~~~~~D~l~ggp 69 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS------------AKLIKGDISKISSDEFPKCDGIIGGP 69 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC------------SEEEESCGGGCCGGGSCCCSEEECCC
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC------------CCcccCChhhCCHhhCCcccEEEecC
Confidence 699999999999999985456667899999999999888853 256788888875432 4689988654
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=85.20 E-value=1.1 Score=40.81 Aligned_cols=44 Identities=14% Similarity=-0.056 Sum_probs=38.0
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-+|||. |.++..+++..+. +|.++|.|++.++.+++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 45688999999987 9999999966676 89999999999998876
No 318
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=84.69 E-value=0.65 Score=43.96 Aligned_cols=44 Identities=20% Similarity=0.438 Sum_probs=36.4
Q ss_pred CceeeEeeccccHHHHHHHHhc------CCcEEEEeCCHHHHHHHHhhcc
Q 024811 158 HLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLA 201 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~------~~~V~~VD~s~~mld~Ar~~l~ 201 (262)
...|+|+|+|.|.++..++... ..++.+||+|+...+.-++++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 4689999999999999998322 1369999999999998888775
No 319
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=83.36 E-value=6.1 Score=29.38 Aligned_cols=38 Identities=16% Similarity=0.187 Sum_probs=26.5
Q ss_pred ceeeEeeccccHHHHHHHH---hcCCcEEEEeCCHHHHHHHHh
Q 024811 159 LVALDCGSGIGRITKNLLI---RYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~---~~~~~V~~VD~s~~mld~Ar~ 198 (262)
.+|+=+|+ |.++..++. +.+.+|.++|.++..++..++
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~ 45 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA 45 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 46777876 555555542 346789999999987776654
No 320
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=81.08 E-value=2.2 Score=38.38 Aligned_cols=45 Identities=13% Similarity=-0.001 Sum_probs=37.9
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||-+|||. |.++..+++..+. .|.++|.+++-++.+++.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 45678999999986 8899999966666 699999999999998764
No 321
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=80.74 E-value=2.9 Score=37.06 Aligned_cols=45 Identities=16% Similarity=0.043 Sum_probs=39.0
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=.|||. |.++..+++..+.+|.++|.+++-++.+++.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence 45678999999875 9999999977788999999999999998774
No 322
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=79.35 E-value=3.1 Score=37.23 Aligned_cols=45 Identities=22% Similarity=0.183 Sum_probs=37.8
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||-+|+|. |.++..+++..+. +|.++|.++.-++.+++.
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 215 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI 215 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 45678999999885 8999999966666 899999999999988763
No 323
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=79.02 E-value=2.3 Score=34.34 Aligned_cols=44 Identities=7% Similarity=-0.094 Sum_probs=36.2
Q ss_pred CCCCceeeEee--ccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlG--cGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-.| .|+|..+..++...+.+|.+++.+++.++.+++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 44678999999 478988888886677889999999998887765
No 324
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=78.56 E-value=9 Score=29.28 Aligned_cols=67 Identities=15% Similarity=0.026 Sum_probs=41.8
Q ss_pred CceeeEeeccc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC----CCCccc
Q 024811 158 HLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (262)
Q Consensus 158 ~~~VLDlGcGt-G~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~----~~~~yD 232 (262)
..+|+=||||. |......+...+..|.++|.+++-++.+++. .+.++.+|..+... ....+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-------------g~~~i~gd~~~~~~l~~a~i~~ad 73 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-------------GVRAVLGNAANEEIMQLAHLECAK 73 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-------------TCEEEESCTTSHHHHHHTTGGGCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-------------CCCEEECCCCCHHHHHhcCcccCC
Confidence 45788888864 4333333324577899999999998887762 34567777654311 113567
Q ss_pred hhhhh
Q 024811 233 VIWVQ 237 (262)
Q Consensus 233 lI~s~ 237 (262)
+|++.
T Consensus 74 ~vi~~ 78 (140)
T 3fwz_A 74 WLILT 78 (140)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 66643
No 325
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=77.28 E-value=3.8 Score=37.19 Aligned_cols=45 Identities=13% Similarity=-0.057 Sum_probs=37.6
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||-+|||. |.++..+++..+. .|.++|.+++-++.+++.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l 229 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ 229 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc
Confidence 45678999999876 8999999966666 699999999999999763
No 326
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=75.44 E-value=3.9 Score=36.97 Aligned_cols=44 Identities=16% Similarity=0.009 Sum_probs=37.5
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-+|+|. |.++..+++..+.+|.+++.|++-++.+++
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 44678999999885 888999997777789999999999998876
No 327
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=73.92 E-value=4.7 Score=35.45 Aligned_cols=44 Identities=7% Similarity=-0.059 Sum_probs=37.2
Q ss_pred CCCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-.|| |+|..+..+++..+.+|.+++.+++.++.+++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 188 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ 188 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 446789999997 88999988887777899999999998888844
No 328
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=73.86 E-value=5.4 Score=35.47 Aligned_cols=45 Identities=18% Similarity=0.077 Sum_probs=37.6
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||-+|+|. |..+..+++..+.+|.+++.+++-++.+++.
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 211 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC 211 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh
Confidence 44678999999875 8888999976777899999999999988763
No 329
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=73.38 E-value=3.5 Score=36.64 Aligned_cols=45 Identities=16% Similarity=0.057 Sum_probs=38.5
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |.++..+++..+.+|.+++.+++-++.+++.
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 219 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM 219 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc
Confidence 45688999999876 8999999977788999999999999988873
No 330
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=73.29 E-value=1.4 Score=42.05 Aligned_cols=60 Identities=22% Similarity=0.104 Sum_probs=45.8
Q ss_pred CceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~ 225 (262)
..+++|+=||.|.++.-|-...+..|.++|.++..++.-+.+... .+...+++.|+.++.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~--------~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYC--------DPATHHFNEDIRDIT 147 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCC--------CTTTCEEESCTHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhccc--------CCCcceeccchhhhh
Confidence 578999999999999999844456688999999999988887631 123356677876654
No 331
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=73.14 E-value=8.9 Score=32.33 Aligned_cols=82 Identities=10% Similarity=-0.024 Sum_probs=52.4
Q ss_pred ceeeEeeccccHHHHHHHHhc---CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 159 LVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~~~---~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.+||=.|| |.++..|+... +.+|.+++-++.-.+.... ..+.++.+|+.++. -..+|+|+
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------------~~~~~~~~D~~d~~--~~~~d~vi 68 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------------SGAEPLLWPGEEPS--LDGVTHLL 68 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------------TTEEEEESSSSCCC--CTTCCEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------------CCCeEEEecccccc--cCCCCEEE
Confidence 47899994 88887777433 5689999877654433322 15788889998876 35789988
Q ss_pred hhhHHhhcCchhHHHHHHHHHh
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKV 257 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~ 257 (262)
.........++....+++.+.+
T Consensus 69 ~~a~~~~~~~~~~~~l~~a~~~ 90 (286)
T 3ius_A 69 ISTAPDSGGDPVLAALGDQIAA 90 (286)
T ss_dssp ECCCCBTTBCHHHHHHHHHHHH
T ss_pred ECCCccccccHHHHHHHHHHHh
Confidence 7654333333333345555443
No 332
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=72.71 E-value=4 Score=36.24 Aligned_cols=44 Identities=11% Similarity=-0.059 Sum_probs=37.3
Q ss_pred CCCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-+|+ |+|..+..+++..+.+|.+++.+++.++.+++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence 446789999998 78999999997777899999999888887775
No 333
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=72.12 E-value=13 Score=28.04 Aligned_cols=64 Identities=8% Similarity=-0.006 Sum_probs=40.9
Q ss_pred ceeeEeeccccHHHHHHHH---hcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC----CCCcc
Q 024811 159 LVALDCGSGIGRITKNLLI---RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRY 231 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~---~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~----~~~~y 231 (262)
.+|+=+||| +++..++. ..+.+|.++|.+++-++.+++. ...++.+|..+... ....+
T Consensus 7 ~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-------------~~~~~~gd~~~~~~l~~~~~~~~ 71 (141)
T 3llv_A 7 YEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-------------GFDAVIADPTDESFYRSLDLEGV 71 (141)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-------------TCEEEECCTTCHHHHHHSCCTTC
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-------------CCcEEECCCCCHHHHHhCCcccC
Confidence 468888985 45544442 4467899999999988877653 24566677655311 11357
Q ss_pred chhhhh
Q 024811 232 DVIWVQ 237 (262)
Q Consensus 232 DlI~s~ 237 (262)
|+|++.
T Consensus 72 d~vi~~ 77 (141)
T 3llv_A 72 SAVLIT 77 (141)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 777654
No 334
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=71.91 E-value=5.3 Score=35.27 Aligned_cols=46 Identities=9% Similarity=-0.020 Sum_probs=38.7
Q ss_pred CCCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhc
Q 024811 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESL 200 (262)
Q Consensus 155 ~~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l 200 (262)
..++.+||-.|| |+|..+..+++..+.+|.+++.+++-++.+++.+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~ 200 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF 200 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence 456789999997 7999999999777889999999999998887433
No 335
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=71.39 E-value=6 Score=35.19 Aligned_cols=45 Identities=16% Similarity=-0.040 Sum_probs=37.7
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |.++..+++..+. +|.++|.+++-++.+++.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh
Confidence 45678999999876 8899999966676 799999999999988874
No 336
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=71.24 E-value=6.6 Score=34.75 Aligned_cols=44 Identities=11% Similarity=-0.033 Sum_probs=38.2
Q ss_pred CCCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-.|+ |+|..+..+++..+.+|.+++.+++-++.+++
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 456789999998 78999999997777899999999999988875
No 337
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=69.72 E-value=9.5 Score=35.38 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=42.9
Q ss_pred CceeeEeeccccHHHHHHH---HhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC----CCCCc
Q 024811 158 HLVALDCGSGIGRITKNLL---IRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La---~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~----~~~~~ 230 (262)
..+|+=||+ |+++..++ ...+..|++||.+++.++.+++. .+.++.+|..+.. .....
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~-------------g~~vi~GDat~~~~L~~agi~~ 68 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF-------------GMKVFYGDATRMDLLESAGAAK 68 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT-------------TCCCEESCTTCHHHHHHTTTTT
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC-------------CCeEEEcCCCCHHHHHhcCCCc
Confidence 456887887 45555544 24467899999999999988753 2456777776642 11246
Q ss_pred cchhhhh
Q 024811 231 YDVIWVQ 237 (262)
Q Consensus 231 yDlI~s~ 237 (262)
.|+|++.
T Consensus 69 A~~viv~ 75 (413)
T 3l9w_A 69 AEVLINA 75 (413)
T ss_dssp CSEEEEC
T ss_pred cCEEEEC
Confidence 7777654
No 338
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=69.70 E-value=7.5 Score=34.77 Aligned_cols=45 Identities=16% Similarity=-0.070 Sum_probs=38.5
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |..+..+++..+.+|.+++.+++-++.+++.
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 232 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL 232 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc
Confidence 45688999999876 8899999977788999999999999988764
No 339
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=69.23 E-value=6.7 Score=34.77 Aligned_cols=44 Identities=14% Similarity=0.158 Sum_probs=37.4
Q ss_pred CCCCceeeEeecc--ccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGSG--IGRITKNLLIRY-FNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGcG--tG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-.|+| +|..+..+++.. +.+|.++|.+++.++.+++
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 4467899999987 888888888777 7889999999999988865
No 340
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=69.07 E-value=6.5 Score=35.26 Aligned_cols=45 Identities=9% Similarity=-0.102 Sum_probs=37.2
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |.++..+++..+. +|.+++.+++-++.+++.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 236 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF 236 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh
Confidence 45678999999865 8888999966676 799999999999988763
No 341
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=68.75 E-value=6.6 Score=34.76 Aligned_cols=43 Identities=19% Similarity=0.024 Sum_probs=36.6
Q ss_pred CCceeeEeeccc-cHHHHHHHHhc--CCcEEEEeCCHHHHHHHHhh
Q 024811 157 QHLVALDCGSGI-GRITKNLLIRY--FNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 157 ~~~~VLDlGcGt-G~lt~~La~~~--~~~V~~VD~s~~mld~Ar~~ 199 (262)
++.+||-+|+|. |.++..+++.. +.+|.+++.|++-++.+++.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l 215 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL 215 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh
Confidence 578999999875 88899999777 77899999999999888763
No 342
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=68.18 E-value=8.9 Score=33.89 Aligned_cols=44 Identities=16% Similarity=0.082 Sum_probs=37.2
Q ss_pred CCCCceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-+|+| +|..+..+++..+.+|.+++.++.-++.+++
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 3467899999986 6888888987777899999999999998875
No 343
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=67.63 E-value=7 Score=34.37 Aligned_cols=44 Identities=9% Similarity=-0.055 Sum_probs=37.9
Q ss_pred CCCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||=.|| |+|..+..+++..+.+|.+++.+++-++.+.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 192 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE 192 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 456889999998 78999999997778899999999998888843
No 344
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=67.43 E-value=6.6 Score=35.20 Aligned_cols=45 Identities=11% Similarity=-0.201 Sum_probs=37.1
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |.++..+++..+. +|.++|.+++-++.+++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 235 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL 235 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 45678999999874 8888889866666 799999999999988763
No 345
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=67.34 E-value=4.9 Score=35.54 Aligned_cols=45 Identities=13% Similarity=0.018 Sum_probs=38.6
Q ss_pred CCCCceeeEeecc--ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcG--tG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+||| +|..+..+++..+.+|.+++.+++-++.+++.
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l 188 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL 188 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC
Confidence 5568899999985 89999999977788999999999988888773
No 346
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=66.60 E-value=8.6 Score=33.95 Aligned_cols=45 Identities=22% Similarity=0.132 Sum_probs=37.9
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |.++..+++.. +.+|.++|.+++-++.+++.
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV 215 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 44678999999876 88999999666 67999999999999998874
No 347
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=66.46 E-value=5.9 Score=35.39 Aligned_cols=44 Identities=16% Similarity=0.023 Sum_probs=36.8
Q ss_pred CCCCceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-+|+| +|.++..+++..+.+|.+++.|++-++.+++
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 4567899999976 4888888887677789999999998888876
No 348
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=66.42 E-value=7.9 Score=34.68 Aligned_cols=44 Identities=14% Similarity=-0.119 Sum_probs=36.7
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||=+|+|. |.++..+++..+. +|.+++.+++-++.+++
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 45678999999875 8888889866676 79999999999998875
No 349
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=66.04 E-value=7.3 Score=34.85 Aligned_cols=45 Identities=13% Similarity=-0.141 Sum_probs=36.9
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |.++..+++..+. +|.+++.+++-++.+++.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l 234 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF 234 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 45678999999875 8888888866676 799999999999988753
No 350
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=65.75 E-value=10 Score=33.79 Aligned_cols=45 Identities=22% Similarity=0.043 Sum_probs=38.0
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCCc-EEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFNE-VDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~~-V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |.++..+++..+.+ |.++|.+++-++.+++.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 45678899999876 88999999767765 99999999999999886
No 351
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=65.25 E-value=8.6 Score=34.47 Aligned_cols=45 Identities=9% Similarity=-0.138 Sum_probs=37.0
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |.++..+++..+. +|.++|.+++-++.+++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 239 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence 45678999999874 8888899966676 799999999999988763
No 352
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=65.03 E-value=10 Score=34.13 Aligned_cols=45 Identities=20% Similarity=0.017 Sum_probs=37.7
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |.++..+++..+. +|.+++.+++-++.+++.
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 45678999999876 8889999976776 899999999999988874
No 353
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=64.86 E-value=3.4 Score=43.05 Aligned_cols=45 Identities=20% Similarity=0.122 Sum_probs=37.6
Q ss_pred CCceeeEeeccccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHhhcc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLA 201 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~~-~~V~~VD~s~~mld~Ar~~l~ 201 (262)
...+++|+=||.|.++.-|-...+ ..|.++|.++..++.-+.|..
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p 584 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP 584 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC
Confidence 356899999999999999984444 467899999999999888864
No 354
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=64.64 E-value=5.9 Score=34.32 Aligned_cols=43 Identities=9% Similarity=-0.104 Sum_probs=36.7
Q ss_pred CCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 156 NQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 156 ~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
.++.+||=+|+ |+|..+..+++..+.+|.+++.+++-++.+++
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA 168 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 45789999997 78999999997777899999999988888765
No 355
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=64.55 E-value=9.7 Score=35.77 Aligned_cols=53 Identities=9% Similarity=0.113 Sum_probs=37.9
Q ss_pred CceeeEeeccccHHHHHHHHhc---CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC
Q 024811 158 HLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF 224 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~---~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~ 224 (262)
..+|+=+|| |+++..|++.. +..|++||.+++.++.+.+++ .+..+.+|..+.
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------------~~~~i~Gd~~~~ 58 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------------DLRVVNGHASHP 58 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------------SCEEEESCTTCH
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------------CcEEEEEcCCCH
Confidence 346666666 57777777544 457999999999999888765 345667776653
No 356
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=62.79 E-value=8 Score=34.76 Aligned_cols=45 Identities=11% Similarity=-0.061 Sum_probs=37.6
Q ss_pred CCCCceeeEeecc-ccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcG-tG~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+| +|.++..+++..+. +|.++|.+++-++.|++.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l 237 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF 237 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 4567899999987 48899999976676 899999999999988864
No 357
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=62.67 E-value=1.5 Score=43.14 Aligned_cols=105 Identities=13% Similarity=0.075 Sum_probs=56.7
Q ss_pred CCceeeEeeccccHHHHHHHHhc--C-----------CcEEEEeC---CHHHHHHHHhhcc-----------cccc----
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY--F-----------NEVDLLEP---VSHFLDAARESLA-----------PENH---- 205 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~--~-----------~~V~~VD~---s~~mld~Ar~~l~-----------~a~~---- 205 (262)
+.-+|+|+|-|+|.....+++.. + -+++-+|. +..-+..|-.... ....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 35699999999999888887321 1 24677788 4444443322111 0000
Q ss_pred --c--CCCCCcceEEEEcCCCCCCCC-----CCccchhhhhhHHhhcCchh--HHHHHHHHHhhccCC
Q 024811 206 --M--APDMHKATNFFCVPLQDFTPE-----TGRYDVIWVQWCIGHLTDDD--FVSFFKRAKVNHSQT 262 (262)
Q Consensus 206 --~--~~~~~~~v~f~~~d~~~~~~~-----~~~yDlI~s~~vl~hltD~e--l~~~l~~~~~~LkPG 262 (262)
+ ..+..-.++++.+|+.+.-+. .+.+|+|+.-..--.- +++ -..+|..+.++++||
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~-np~~w~~~~~~~l~~~~~~g 204 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAK-NPDMWNEQLFNAMARMTRPG 204 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCC-ChhhhhHHHHHHHHHHhCCC
Confidence 0 001112566777887553221 2579998763211111 111 126888888888775
No 358
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=62.67 E-value=5.4 Score=35.93 Aligned_cols=67 Identities=19% Similarity=0.208 Sum_probs=41.1
Q ss_pred CCceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC---CCCccc
Q 024811 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGRYD 232 (262)
Q Consensus 157 ~~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~---~~~~yD 232 (262)
+..+||=+||| +|+.....+ ....+|+++|.+..-++.+++.. ..+..|+.+... .-..+|
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L-~~~~~v~~~~~~~~~~~~~~~~~--------------~~~~~d~~d~~~l~~~~~~~D 79 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDL-KDEFDVYIGDVNNENLEKVKEFA--------------TPLKVDASNFDKLVEVMKEFE 79 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHH-TTTSEEEEEESCHHHHHHHTTTS--------------EEEECCTTCHHHHHHHHTTCS
T ss_pred CccEEEEECCCHHHHHHHHHH-hcCCCeEEEEcCHHHHHHHhccC--------------CcEEEecCCHHHHHHHHhCCC
Confidence 35689999995 455444444 22457999999988887765532 334556654321 013678
Q ss_pred hhhhhh
Q 024811 233 VIWVQW 238 (262)
Q Consensus 233 lI~s~~ 238 (262)
+|++.-
T Consensus 80 vVi~~~ 85 (365)
T 3abi_A 80 LVIGAL 85 (365)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 888753
No 359
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=60.44 E-value=13 Score=33.43 Aligned_cols=44 Identities=16% Similarity=0.098 Sum_probs=36.7
Q ss_pred CCCCceeeEeecc-ccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGSG-IGRITKNLLIRYF-NEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGcG-tG~lt~~La~~~~-~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-+|+| .|.++..+++..+ .+|.+++.+++-++.+++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 4467899999966 5888899997677 599999999999998875
No 360
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=60.31 E-value=13 Score=33.20 Aligned_cols=44 Identities=11% Similarity=-0.021 Sum_probs=37.3
Q ss_pred CCCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-.|+ |+|..+..+++..+.+|.+++.+++-++.+++
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 213 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Confidence 456789999996 88999999997778899999999998887765
No 361
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=59.94 E-value=22 Score=28.01 Aligned_cols=41 Identities=20% Similarity=-0.016 Sum_probs=27.5
Q ss_pred CceeeEeeccc-cHHHHHHHHhc-CCcEEEEeCCHHHHHHHHh
Q 024811 158 HLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 158 ~~~VLDlGcGt-G~lt~~La~~~-~~~V~~VD~s~~mld~Ar~ 198 (262)
+.+|+=+|||. |......+... +.+|.++|.+++-++.+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~ 81 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS 81 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH
Confidence 45788888753 33322223245 6789999999988877665
No 362
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=59.78 E-value=11 Score=33.48 Aligned_cols=45 Identities=13% Similarity=0.036 Sum_probs=38.6
Q ss_pred CCCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+ |+|..+..+++..+.+|.+++.+++-++.+++.
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ 203 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV 203 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 456889999996 789999999977788999999999888888764
No 363
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=59.02 E-value=17 Score=29.73 Aligned_cols=64 Identities=11% Similarity=0.023 Sum_probs=39.6
Q ss_pred eeeEeeccccHHHHHHHHh---cCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC----CCCccc
Q 024811 160 VALDCGSGIGRITKNLLIR---YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (262)
Q Consensus 160 ~VLDlGcGtG~lt~~La~~---~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~----~~~~yD 232 (262)
+|+=||+ |+++..++.. .+..|.++|.+++-++...+.. ...++.+|..+... .-..+|
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~------------~~~~i~gd~~~~~~l~~a~i~~ad 67 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL------------KATIIHGDGSHKEILRDAEVSKND 67 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS------------SSEEEESCTTSHHHHHHHTCCTTC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc------------CCeEEEcCCCCHHHHHhcCcccCC
Confidence 3555564 6776666633 3678999999999887755432 24567777765311 113567
Q ss_pred hhhhh
Q 024811 233 VIWVQ 237 (262)
Q Consensus 233 lI~s~ 237 (262)
+|++.
T Consensus 68 ~vi~~ 72 (218)
T 3l4b_C 68 VVVIL 72 (218)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 76654
No 364
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=58.99 E-value=12 Score=32.66 Aligned_cols=44 Identities=11% Similarity=-0.085 Sum_probs=37.3
Q ss_pred CCCCceeeEee--ccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlG--cGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-.| .|+|..+..+++..+.+|.+++.+++-++.+++
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 45678999999 688999988887778899999999988888876
No 365
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=58.66 E-value=21 Score=27.39 Aligned_cols=67 Identities=12% Similarity=0.142 Sum_probs=39.3
Q ss_pred ceeeEeeccccHHHHHHHHh---cCCcEEEEeCC-HHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC----CCCc
Q 024811 159 LVALDCGSGIGRITKNLLIR---YFNEVDLLEPV-SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGR 230 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~~---~~~~V~~VD~s-~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~----~~~~ 230 (262)
.+|+=+|+ |+++..++.. .+.+|+++|.+ ++-.+...+... ..+.++.+|..+... .-..
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~----------~~~~~i~gd~~~~~~l~~a~i~~ 71 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----------DNADVIPGDSNDSSVLKKAGIDR 71 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----------TTCEEEESCTTSHHHHHHHTTTT
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc----------CCCeEEEcCCCCHHHHHHcChhh
Confidence 46777775 7777766633 36789999997 454544443321 135677787754311 1235
Q ss_pred cchhhhh
Q 024811 231 YDVIWVQ 237 (262)
Q Consensus 231 yDlI~s~ 237 (262)
.|+|++.
T Consensus 72 ad~vi~~ 78 (153)
T 1id1_A 72 CRAILAL 78 (153)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 6766654
No 366
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=58.54 E-value=14 Score=32.71 Aligned_cols=43 Identities=19% Similarity=0.138 Sum_probs=36.1
Q ss_pred CCceeeEeecc-ccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 157 QHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 157 ~~~~VLDlGcG-tG~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
++.+||=+|+| +|..+..+++..+. +|.+++.+++-++.+++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~ 211 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV 211 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 67899999986 48888888866776 899999999998888753
No 367
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=57.90 E-value=15 Score=32.74 Aligned_cols=44 Identities=11% Similarity=-0.062 Sum_probs=37.8
Q ss_pred CCCCceeeEee--ccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlG--cGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||=.| .|+|..+..+++..+.+|.+++.+++-++.+++
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 34678999999 678999999997777899999999988888876
No 368
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=57.76 E-value=16 Score=33.15 Aligned_cols=45 Identities=22% Similarity=0.079 Sum_probs=37.3
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+|. |.++..+++..+. +|.++|.+++-++.+++.
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 45678899899765 8888889866676 899999999999998874
No 369
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=57.38 E-value=15 Score=32.23 Aligned_cols=45 Identities=20% Similarity=0.109 Sum_probs=38.4
Q ss_pred CCCCceeeEee--ccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlG--cGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+| .|+|..+..+++..+.+|.+++.+++-++.+++.
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ 192 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY 192 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence 45678999999 4789999999977788999999999999888763
No 370
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=56.83 E-value=13 Score=32.42 Aligned_cols=45 Identities=9% Similarity=-0.056 Sum_probs=38.3
Q ss_pred CCCCceeeEee--ccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlG--cGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=.| .|+|..+..+++..+.+|.+++.+++-++.+++.
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ 184 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL 184 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence 45678999999 4789999999977788999999999999988763
No 371
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=56.67 E-value=15 Score=32.62 Aligned_cols=44 Identities=16% Similarity=-0.043 Sum_probs=37.2
Q ss_pred CCCCceeeEee--ccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlG--cGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||-.| .|+|..+..+++..+.+|.+++.+++-++.+++
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 205 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK 205 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 45678999998 488999999997778899999999998888854
No 372
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=55.60 E-value=20 Score=29.61 Aligned_cols=63 Identities=17% Similarity=0.067 Sum_probs=40.3
Q ss_pred CceeeEeeccccHHHHHHHHhc---CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC----CCCCc
Q 024811 158 HLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~---~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~----~~~~~ 230 (262)
..+|+=||+ |+++..++... +. |.++|.++..++.++ . .+.++.+|..+.. ..-..
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~-------------~~~~i~gd~~~~~~l~~a~i~~ 71 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-S-------------GANFVHGDPTRVSDLEKANVRG 71 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-T-------------TCEEEESCTTCHHHHHHTTCTT
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-c-------------CCeEEEcCCCCHHHHHhcCcch
Confidence 457888887 68888777443 34 899999988877665 1 3467777776431 11235
Q ss_pred cchhhhh
Q 024811 231 YDVIWVQ 237 (262)
Q Consensus 231 yDlI~s~ 237 (262)
.|+|++.
T Consensus 72 ad~vi~~ 78 (234)
T 2aef_A 72 ARAVIVD 78 (234)
T ss_dssp CSEEEEC
T ss_pred hcEEEEc
Confidence 6776654
No 373
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=55.31 E-value=1.7 Score=38.30 Aligned_cols=50 Identities=2% Similarity=-0.085 Sum_probs=33.4
Q ss_pred ceEEEEcCCCCCC--CCCCccchhhhhhHHhhcCc--------------h----hHHHHHHHHHhhccCC
Q 024811 213 ATNFFCVPLQDFT--PETGRYDVIWVQWCIGHLTD--------------D----DFVSFFKRAKVNHSQT 262 (262)
Q Consensus 213 ~v~f~~~d~~~~~--~~~~~yDlI~s~~vl~hltD--------------~----el~~~l~~~~~~LkPG 262 (262)
.+.++++|..++- .++++||+|+++.......+ . .+..+++++.++|+||
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~ 90 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPG 90 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCC
Confidence 5688999987742 23468999999876432211 1 1345788999999985
No 374
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=53.90 E-value=11 Score=33.26 Aligned_cols=43 Identities=21% Similarity=0.152 Sum_probs=35.3
Q ss_pred CCceeeEeecc-ccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 157 QHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 157 ~~~~VLDlGcG-tG~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
++.+||-+|+| +|..+..+++..+. +|.+++.+++-++.+++.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l 208 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY 208 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 67899999975 48888888876776 899999999888777664
No 375
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=52.67 E-value=11 Score=32.67 Aligned_cols=44 Identities=20% Similarity=0.138 Sum_probs=37.2
Q ss_pred CCCCceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+| +|.++..+++..+.+|.+++ |++-++.+++.
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l 184 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR 184 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc
Confidence 5568899999986 58999999977788999999 99888888763
No 376
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=52.62 E-value=40 Score=29.30 Aligned_cols=92 Identities=22% Similarity=0.276 Sum_probs=47.8
Q ss_pred CCcccchhhHHHHHHHHhhccCCCccCCCCceeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccc
Q 024811 129 NVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH 205 (262)
Q Consensus 129 ~is~~di~~s~~fL~~ll~~~l~~~~~~~~~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~ 205 (262)
+-|..|+.....|+..+-. +| ++..+|=-|+ |+|+ +++.|+ +.+.+|.+++-+++-++.+.+.+.
T Consensus 7 ~~s~~~~~~~n~~~~~Ms~-rL------~gKvalVTGas~GIG~aiA~~la-~~Ga~V~i~~r~~~~l~~~~~~~g---- 74 (273)
T 4fgs_A 7 HSSGVDLGTENLYFQSMTQ-RL------NAKIAVITGATSGIGLAAAKRFV-AEGARVFITGRRKDVLDAAIAEIG---- 74 (273)
T ss_dssp ------------------C-TT------TTCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHC----
T ss_pred cccCCCccccccchhhhcc-hh------CCCEEEEeCcCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHcC----
Confidence 3445555555555555532 23 3556777775 4444 455555 668899999999998887766552
Q ss_pred cCCCCCcceEEEEcCCCCCCCC----------CCccchhhhhh
Q 024811 206 MAPDMHKATNFFCVPLQDFTPE----------TGRYDVIWVQW 238 (262)
Q Consensus 206 ~~~~~~~~v~f~~~d~~~~~~~----------~~~yDlI~s~~ 238 (262)
.+..++.+|+.+...- -++.|+++.+-
T Consensus 75 ------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNA 111 (273)
T 4fgs_A 75 ------GGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNA 111 (273)
T ss_dssp ------TTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred ------CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 2456778888764210 14678777654
No 377
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=52.56 E-value=4.8 Score=39.30 Aligned_cols=104 Identities=12% Similarity=0.113 Sum_probs=58.3
Q ss_pred CceeeEeeccccHHHHHHHHhc-----------CC--cEEEEeC---CHHHHHHHHhhccc-----------cccc----
Q 024811 158 HLVALDCGSGIGRITKNLLIRY-----------FN--EVDLLEP---VSHFLDAARESLAP-----------ENHM---- 206 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~-----------~~--~V~~VD~---s~~mld~Ar~~l~~-----------a~~~---- 206 (262)
.-+|||+|-|+|......+... .. +++.+|. +++-+..+-..... ....
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 4699999999999888777331 11 3677898 77777644332111 0000
Q ss_pred ----CCCCCcceEEEEcCCCCCCCC-----CCccchhhhhhHHhhcCchhH--HHHHHHHHhhccCC
Q 024811 207 ----APDMHKATNFFCVPLQDFTPE-----TGRYDVIWVQWCIGHLTDDDF--VSFFKRAKVNHSQT 262 (262)
Q Consensus 207 ----~~~~~~~v~f~~~d~~~~~~~-----~~~yDlI~s~~vl~hltD~el--~~~l~~~~~~LkPG 262 (262)
..+..-.++++.+|+.+.-+. ...||+|+.-. |.--.++++ ..+|+.+.+.++||
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~-f~p~~np~~w~~~~~~~l~~~~~~g 212 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPG 212 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC-SCGGGCGGGSCHHHHHHHHHHEEEE
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC-CCCcCChhhhhHHHHHHHHHHhCCC
Confidence 000012345566776543221 25799987632 111112221 36889999988875
No 378
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=52.03 E-value=20 Score=31.85 Aligned_cols=45 Identities=22% Similarity=0.117 Sum_probs=38.2
Q ss_pred CCCCceeeEee--ccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlG--cGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+| .|+|..+..+++..+.+|.+++.+++-++.+++.
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l 211 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL 211 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 45678999995 5689999999977788999999999999988763
No 379
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=51.49 E-value=23 Score=30.99 Aligned_cols=44 Identities=16% Similarity=0.006 Sum_probs=37.0
Q ss_pred CCCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||=.|+ |+|..+..+++..+.+|.+++.+++-++.+++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK 188 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 456789999994 88999999987778899999999988887765
No 380
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=47.58 E-value=26 Score=30.94 Aligned_cols=46 Identities=9% Similarity=-0.119 Sum_probs=37.6
Q ss_pred CCCC--ceeeEeec--cccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhhc
Q 024811 155 NNQH--LVALDCGS--GIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESL 200 (262)
Q Consensus 155 ~~~~--~~VLDlGc--GtG~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~l 200 (262)
..++ .+||=.|+ |+|..+..+++..+. +|.+++.+++-++.+++.+
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~ 206 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL 206 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 3456 89999996 889999888877777 8999999998888887633
No 381
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=46.77 E-value=14 Score=32.20 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=35.6
Q ss_pred CCc-eeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 157 QHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 157 ~~~-~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
++. +||=.|+ |.|..+..+++..+.+|.+++.+++-++.+++
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~ 192 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV 192 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 454 7999997 88999999997778889999999888888876
No 382
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=46.70 E-value=23 Score=31.39 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=35.4
Q ss_pred CCceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhc
Q 024811 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESL 200 (262)
Q Consensus 157 ~~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l 200 (262)
++.+||=+|+| +|.++..+++..+.+|.+++.+++-++.+++.+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l 224 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL 224 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc
Confidence 57889999976 578888888667778999999998888887443
No 383
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=46.34 E-value=37 Score=30.54 Aligned_cols=104 Identities=12% Similarity=0.066 Sum_probs=62.2
Q ss_pred CceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh-cccccc------------cCC-----CCCcceEEEEc
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARES-LAPENH------------MAP-----DMHKATNFFCV 219 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~-l~~a~~------------~~~-----~~~~~v~f~~~ 219 (262)
...|+-+|||-=...-.|.......+..+|++-.-+-..|.+ +..... ... ....+..++.+
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~ 170 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGA 170 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEEC
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEcc
Confidence 457999999999999988843223444554443333333332 211000 000 01246778899
Q ss_pred CCCCCC----------CCCCccchhhhhhHHhhcCchhHHHHHHHHHhhccC
Q 024811 220 PLQDFT----------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVNHSQ 261 (262)
Q Consensus 220 d~~~~~----------~~~~~yDlI~s~~vl~hltD~el~~~l~~~~~~LkP 261 (262)
|+.+.. .+....=++++-.++.||+.++...+|+.+.....+
T Consensus 171 DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~ 222 (334)
T 3iei_A 171 DLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFER 222 (334)
T ss_dssp CTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS
T ss_pred ccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC
Confidence 987621 111233355666789999999988999999876654
No 384
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=45.56 E-value=65 Score=28.24 Aligned_cols=83 Identities=14% Similarity=0.011 Sum_probs=48.4
Q ss_pred ceeeEeeccc-c-HHHHHHHHhcCC--cEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCC-CCCCCCccch
Q 024811 159 LVALDCGSGI-G-RITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYDV 233 (262)
Q Consensus 159 ~~VLDlGcGt-G-~lt~~La~~~~~--~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~-~~~~~~~yDl 233 (262)
.+|.=||+|. | .++..|. ..+. +|.++|.+++-++.+.+.= .+.-...+..+ . -...|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~-~~G~~~~V~~~dr~~~~~~~a~~~G------------~~~~~~~~~~~~~---~~~aDv 97 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLR-RSGFKGKIYGYDINPESISKAVDLG------------IIDEGTTSIAKVE---DFSPDF 97 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHH-HTTCCSEEEEECSCHHHHHHHHHTT------------SCSEEESCTTGGG---GGCCSE
T ss_pred CEEEEEeeCHHHHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHCC------------CcchhcCCHHHHh---hccCCE
Confidence 5777788663 2 3444455 4455 8999999999888776531 11112233333 2 135677
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+..- +...+..+++++...|+||
T Consensus 98 Vilav-----p~~~~~~vl~~l~~~l~~~ 121 (314)
T 3ggo_A 98 VMLSS-----PVRTFREIAKKLSYILSED 121 (314)
T ss_dssp EEECS-----CGGGHHHHHHHHHHHSCTT
T ss_pred EEEeC-----CHHHHHHHHHHHhhccCCC
Confidence 77543 3333446777777777764
No 385
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=44.99 E-value=34 Score=27.84 Aligned_cols=68 Identities=16% Similarity=0.138 Sum_probs=40.5
Q ss_pred CceeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcce-EEEEcCCC-CCCCCCCccc
Q 024811 158 HLVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKAT-NFFCVPLQ-DFTPETGRYD 232 (262)
Q Consensus 158 ~~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v-~f~~~d~~-~~~~~~~~yD 232 (262)
+.+||=.|+ |+|+ +++.|+ +.+.+|.+++-++.-++..... .+ .++.+|+. ++...-+..|
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~-~~G~~V~~~~R~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELK-NKGHEPVAMVRNEEQGPELRER-------------GASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHT-------------TCSEEEECCTTSCCGGGGTTCS
T ss_pred CCeEEEECCCChHHHHHHHHHH-hCCCeEEEEECChHHHHHHHhC-------------CCceEEEcccHHHHHHHHcCCC
Confidence 567887775 3444 333333 4577899998877665443321 45 77888875 2211124688
Q ss_pred hhhhhhH
Q 024811 233 VIWVQWC 239 (262)
Q Consensus 233 lI~s~~v 239 (262)
+|+.+-.
T Consensus 87 ~vi~~ag 93 (236)
T 3e8x_A 87 AVVFAAG 93 (236)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8887654
No 386
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=44.91 E-value=32 Score=30.62 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=35.2
Q ss_pred CCceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhc
Q 024811 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESL 200 (262)
Q Consensus 157 ~~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l 200 (262)
++.+||=+|+| +|..+..+++..+.+|.+++.++.-++.+++.+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l 231 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF 231 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 57789889976 478888888667778999999998888877443
No 387
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=44.77 E-value=36 Score=32.19 Aligned_cols=65 Identities=12% Similarity=-0.050 Sum_probs=42.7
Q ss_pred CceeeEeeccccHHHHHHHHhc---CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC----CCCc
Q 024811 158 HLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGR 230 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~---~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~----~~~~ 230 (262)
..+++=||+ |+++..+++.. ...|.++|.+++.++.+++.+ .+.++.+|..+... .-..
T Consensus 127 ~~hviI~G~--g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~------------~~~~i~Gd~~~~~~L~~a~i~~ 192 (565)
T 4gx0_A 127 RGHILIFGI--DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQE------------GFKVVYGSPTDAHVLAGLRVAA 192 (565)
T ss_dssp CSCEEEESC--CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSC------------SSEEEESCTTCHHHHHHTTGGG
T ss_pred CCeEEEECC--ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------------CCeEEEeCCCCHHHHHhcCccc
Confidence 346666665 56777777433 567999999999998887752 34677888765321 1245
Q ss_pred cchhhh
Q 024811 231 YDVIWV 236 (262)
Q Consensus 231 yDlI~s 236 (262)
+|.|++
T Consensus 193 a~~vi~ 198 (565)
T 4gx0_A 193 ARSIIA 198 (565)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 666665
No 388
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=44.55 E-value=66 Score=26.40 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=48.4
Q ss_pred CceeeEeecccc--H-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGtG--~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++.| + +++.|+ +.+.+|.+++-++..++...+.+... ...+.++.+|+.+...-
T Consensus 9 ~k~vlITGas~giG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALA-REGAAVVVADINAEAAEAVAKQIVAD-------GGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 456777786443 3 455555 55778999999998888777666431 24678888998874210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 81 ~~~~g~id~li~~A 94 (253)
T 3qiv_A 81 LAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 03678887664
No 389
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=43.30 E-value=20 Score=32.16 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=27.0
Q ss_pred CceeeEeeccccHHHHHHHHhcCC------cEEEEeCCHHH
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFN------EVDLLEPVSHF 192 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~------~V~~VD~s~~m 192 (262)
+..|+=+|||+|+....|. +.++ +..++||.+..
T Consensus 61 ~~~VVYVGSApG~HL~~L~-~~fp~~f~~ikWvLiDPap~~ 100 (307)
T 3mag_A 61 GATVVYIGSAPGTHIRYLR-DHFYNLGVIIKWMLIDGRHHD 100 (307)
T ss_dssp TCEEEEESCCSCHHHHHHH-HHHHHTTCCCEEEEEESSCCC
T ss_pred CcEEEEecccCccHHHHHH-HhchhhCCCeEEEEEcCCcch
Confidence 5699999999999888888 5443 56889997753
No 390
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=42.91 E-value=37 Score=30.10 Aligned_cols=44 Identities=23% Similarity=0.135 Sum_probs=35.3
Q ss_pred CCCCceeeEeec-cccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGS-GIGRITKNLLIRY-FNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGc-GtG~lt~~La~~~-~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||=+|+ |+|.++..+++.. +.+|.++|.+++-++.+++
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 446788988886 4577788888666 7789999999999998875
No 391
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=42.60 E-value=91 Score=26.26 Aligned_cols=39 Identities=23% Similarity=0.298 Sum_probs=26.7
Q ss_pred eeeEeeccc-cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 160 ~VLDlGcGt-G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
+|.=||+|. |. ++..|+ +.+.+|+++|.+++-++..++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~r~~~~~~~~~~~ 45 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLH-QGGNDVTLIDQWPAHIEAIRKN 45 (316)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHH
T ss_pred eEEEECcCHHHHHHHHHHH-hCCCcEEEEECCHHHHHHHHhC
Confidence 577788763 33 344444 5567899999999888776653
No 392
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=42.57 E-value=81 Score=22.07 Aligned_cols=66 Identities=14% Similarity=0.054 Sum_probs=39.5
Q ss_pred CceeeEeeccccHHHHHHH---HhcC-CcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC---CCCc
Q 024811 158 HLVALDCGSGIGRITKNLL---IRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGR 230 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La---~~~~-~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~---~~~~ 230 (262)
..+|+=+|+ |.++..++ ...+ .+|.++|.++.-++..... .+.++..|+.+... .-..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~-------------~~~~~~~d~~~~~~~~~~~~~ 69 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRM-------------GVATKQVDAKDEAGLAKALGG 69 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTT-------------TCEEEECCTTCHHHHHHHTTT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhC-------------CCcEEEecCCCHHHHHHHHcC
Confidence 457888898 55544443 2345 6799999998877665521 34556666654210 0135
Q ss_pred cchhhhhh
Q 024811 231 YDVIWVQW 238 (262)
Q Consensus 231 yDlI~s~~ 238 (262)
+|+|+..-
T Consensus 70 ~d~vi~~~ 77 (118)
T 3ic5_A 70 FDAVISAA 77 (118)
T ss_dssp CSEEEECS
T ss_pred CCEEEECC
Confidence 77777553
No 393
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=42.48 E-value=76 Score=26.30 Aligned_cols=75 Identities=20% Similarity=0.141 Sum_probs=50.9
Q ss_pred CceeeEeec-c--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC------
Q 024811 158 HLVALDCGS-G--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (262)
Q Consensus 158 ~~~VLDlGc-G--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------ 227 (262)
+.+||=.|+ | +|. +++.|+ +.+.+|.+++-++.-++...+.+... ...++.++.+|+.+...-
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRAL-LEGADVVISDYHERRLGETRDQLADL------GLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTT------CSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHH-HCCCEEEEecCCHHHHHHHHHHHHhc------CCCceEEEEeCCCCHHHHHHHHHH
Confidence 557888886 4 666 555666 66788999999988887777766331 224688999999874210
Q ss_pred ----CCccchhhhhhH
Q 024811 228 ----TGRYDVIWVQWC 239 (262)
Q Consensus 228 ----~~~yDlI~s~~v 239 (262)
-++.|++|.+-.
T Consensus 95 ~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHhCCCcEEEECCC
Confidence 036788877643
No 394
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=41.17 E-value=80 Score=26.40 Aligned_cols=73 Identities=11% Similarity=0.072 Sum_probs=51.0
Q ss_pred CceeeEeec----cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC------
Q 024811 158 HLVALDCGS----GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ 226 (262)
Q Consensus 158 ~~~VLDlGc----GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~------ 226 (262)
+..+|=-|+ |+|+ +++.|+ +.+.+|.+++-+++.++.+.+.+... ....+.++.+|+.+...
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la-~~Ga~Vvi~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLD-QLGAKLVFTYRKERSRKELEKLLEQL------NQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHGGG------TCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhc------CCCcEEEEEccCCCHHHHHHHHH
Confidence 557777783 6887 566666 77889999999998888877766543 22357788899876421
Q ss_pred ----CCCccchhhhh
Q 024811 227 ----ETGRYDVIWVQ 237 (262)
Q Consensus 227 ----~~~~yDlI~s~ 237 (262)
.-++.|+++.+
T Consensus 79 ~~~~~~G~iD~lvnn 93 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHS 93 (256)
T ss_dssp HHHHHHCCCSEEEEC
T ss_pred HHHHHhCCCCEEEec
Confidence 01567877765
No 395
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=41.07 E-value=19 Score=31.46 Aligned_cols=42 Identities=19% Similarity=0.171 Sum_probs=35.0
Q ss_pred CCc-eeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 157 QHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 157 ~~~-~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
++. +||=.|| |.|..+..+++..+.+|.+++.+++-++.+++
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~ 193 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ 193 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 454 8999996 78999999997777889999999888888875
No 396
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=40.25 E-value=46 Score=28.56 Aligned_cols=73 Identities=22% Similarity=0.148 Sum_probs=49.4
Q ss_pred CceeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+..+|=-|+ |+|+ +++.|+ +.+.+|.++|.+++-++...+.+... ..++.++.+|+.+...-
T Consensus 7 gKvalVTGas~GIG~aiA~~la-~~Ga~Vv~~~~~~~~~~~~~~~i~~~-------g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFA-LNDSIVVAVELLEDRLNQIVQELRGM-------GKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-HcCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 445666665 4444 455555 66889999999999998888777542 34678889998874210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|++|.|-
T Consensus 79 ~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 79 FETYSRIDVLCNNA 92 (254)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 15778877653
No 397
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=39.15 E-value=69 Score=26.64 Aligned_cols=73 Identities=11% Similarity=-0.050 Sum_probs=48.0
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++. |. +++.|+ +.+.+|.+++-++.-++...+.+... ..++.++.+|+.+...-
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFA-AEGFTVFAGRRNGEKLAPLVAEIEAA-------GGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCeEEEEECcCCCHHHHHHHHHHH
Confidence 44677777554 33 455555 55778999999988887777666432 24678889998774210
Q ss_pred --CCccchhhhhh
Q 024811 228 --TGRYDVIWVQW 238 (262)
Q Consensus 228 --~~~yDlI~s~~ 238 (262)
.++.|+++.+-
T Consensus 79 ~~~g~id~lv~nA 91 (252)
T 3h7a_A 79 DAHAPLEVTIFNV 91 (252)
T ss_dssp HHHSCEEEEEECC
T ss_pred HhhCCceEEEECC
Confidence 03678877664
No 398
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=39.02 E-value=36 Score=31.33 Aligned_cols=45 Identities=13% Similarity=0.051 Sum_probs=38.3
Q ss_pred CCCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+|+ |+|.++..+++..+.+|.+++.+++-++.+++.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l 272 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM 272 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh
Confidence 456789999996 789999999977788999999999999988763
No 399
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=38.92 E-value=37 Score=31.06 Aligned_cols=44 Identities=16% Similarity=0.058 Sum_probs=37.7
Q ss_pred CCCCceeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||=.|+ |+|..+..+++..+.+|.+++.+++-++.+++
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 556889999996 78999999997778899999999999988866
No 400
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=38.92 E-value=20 Score=27.68 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=25.7
Q ss_pred CCceeeEeeccc-cHHHHHHHHhcCCcEEEEeCCHHHHHHH
Q 024811 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAA 196 (262)
Q Consensus 157 ~~~~VLDlGcGt-G~lt~~La~~~~~~V~~VD~s~~mld~A 196 (262)
.+.+|+=+|||. |......+...+.+|.++|.++.-++.+
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~ 58 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRL 58 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 366899998754 4333333334567899999987765433
No 401
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=38.54 E-value=30 Score=30.30 Aligned_cols=62 Identities=16% Similarity=0.041 Sum_probs=40.8
Q ss_pred ceeeEeeccccHHHHHHHHhc---CCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCC----CCCCcc
Q 024811 159 LVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (262)
Q Consensus 159 ~~VLDlGcGtG~lt~~La~~~---~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~----~~~~~y 231 (262)
.+++=||+ |+++..+++.. +. |.++|.+++.++ +++. .+.++.+|..+.. ..-...
T Consensus 116 ~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~-------------~~~~i~gd~~~~~~L~~a~i~~a 178 (336)
T 1lnq_A 116 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLRS-------------GANFVHGDPTRVSDLEKANVRGA 178 (336)
T ss_dssp CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHT-------------TCEEEESCTTSHHHHHHTCSTTE
T ss_pred CCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhC-------------CcEEEEeCCCCHHHHHhcChhhc
Confidence 46777765 78888888433 44 999999999888 6542 3567778776532 112456
Q ss_pred chhhhh
Q 024811 232 DVIWVQ 237 (262)
Q Consensus 232 DlI~s~ 237 (262)
|.|++.
T Consensus 179 ~~vi~~ 184 (336)
T 1lnq_A 179 RAVIVD 184 (336)
T ss_dssp EEEEEC
T ss_pred cEEEEc
Confidence 766653
No 402
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=38.52 E-value=38 Score=29.75 Aligned_cols=44 Identities=16% Similarity=0.136 Sum_probs=36.6
Q ss_pred CCCCceeeEee--ccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlG--cGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=+| .|+|..+..+++..+.+|.++ .+++-++.+++.
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l 193 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL 193 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc
Confidence 45688999999 368999999997778899999 888888888763
No 403
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=38.47 E-value=90 Score=25.42 Aligned_cols=73 Identities=15% Similarity=0.059 Sum_probs=47.6
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--------
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-------- 226 (262)
+.++|=.|++. |. +++.|+ +.+.+|.+++-++..++...+.+... ...+.++.+|+.+...
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALA-SKGATVVGTATSQASAEKFENSMKEK-------GFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCceEEEEecCCCHHHHHHHHHHH
Confidence 44677777543 33 455566 55788999999998887776665432 2367888889876421
Q ss_pred --CCCccchhhhhh
Q 024811 227 --ETGRYDVIWVQW 238 (262)
Q Consensus 227 --~~~~yDlI~s~~ 238 (262)
..++.|+++.+-
T Consensus 77 ~~~~~~id~li~~A 90 (247)
T 3lyl_A 77 KAENLAIDILVNNA 90 (247)
T ss_dssp HHTTCCCSEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 013578877664
No 404
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=38.23 E-value=75 Score=26.49 Aligned_cols=82 Identities=12% Similarity=0.165 Sum_probs=45.8
Q ss_pred ceeeEeecc-ccH-HHHHHHHhcCCc-EEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhh
Q 024811 159 LVALDCGSG-IGR-ITKNLLIRYFNE-VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (262)
Q Consensus 159 ~~VLDlGcG-tG~-lt~~La~~~~~~-V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~ 235 (262)
.+|.=|||| .|. ++..|+ ..+.+ |.++|.+++-++.+.+.+. +.+ ..+..+.. ...|+|+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~~~~~~~~~~~~~~g------------~~~-~~~~~~~~---~~~Dvvi 73 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALY-RKGFRIVQVYSRTEESARELAQKVE------------AEY-TTDLAEVN---PYAKLYI 73 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSHHHHHHHHHHTT------------CEE-ESCGGGSC---SCCSEEE
T ss_pred CeEEEEcCCHHHHHHHHHHH-HCCCeEEEEEeCCHHHHHHHHHHcC------------Cce-eCCHHHHh---cCCCEEE
Confidence 467778886 233 334444 33455 8999999988877665431 122 22333321 3578877
Q ss_pred hhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 236 VQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 236 s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
..-. +..+..+++.+...++||
T Consensus 74 ~av~-----~~~~~~v~~~l~~~~~~~ 95 (266)
T 3d1l_A 74 VSLK-----DSAFAELLQGIVEGKREE 95 (266)
T ss_dssp ECCC-----HHHHHHHHHHHHTTCCTT
T ss_pred EecC-----HHHHHHHHHHHHhhcCCC
Confidence 6532 222335666776666654
No 405
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=37.78 E-value=31 Score=29.87 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=35.1
Q ss_pred eeeEeec--cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 160 VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 160 ~VLDlGc--GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
+||=.|+ |+|.++..+++..+.+|.+++.|++-++.+++.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l 190 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL 190 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 4999986 789999999977788999999999999999873
No 406
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=37.77 E-value=92 Score=26.05 Aligned_cols=75 Identities=23% Similarity=0.130 Sum_probs=49.5
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCC-CC-----C-
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP-----E- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~-~~-----~- 227 (262)
+.+||=.|++ +|. +++.|+ +.+.+|.+++-++.-++.+.+.+... ...++.++.+|+.+. .. .
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~Dl~~~~~~v~~~~~~ 84 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLS-SNGIMVVLTCRDVTKGHEAVEKLKNS------NHENVVFHQLDVTDPIATMSSLADF 84 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTT------TCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred CcEEEEecCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc------CCCceEEEEccCCCcHHHHHHHHHH
Confidence 4567777764 443 455555 55778999999988877776666432 224688999999875 21 0
Q ss_pred ----CCccchhhhhhH
Q 024811 228 ----TGRYDVIWVQWC 239 (262)
Q Consensus 228 ----~~~yDlI~s~~v 239 (262)
.++.|++|.+-.
T Consensus 85 ~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 85 IKTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 136888887653
No 407
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=37.13 E-value=97 Score=26.50 Aligned_cols=73 Identities=15% Similarity=0.105 Sum_probs=49.0
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++. |. +++.|+ +.+.+|.+++-++.-++.+.+.+... ..++.++.+|+.+...-
T Consensus 31 gk~vlVTGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFA-RRGARLVLSDVDQPALEQAVNGLRGQ-------GFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEEccCCCHHHHHHHHHHH
Confidence 45788788653 43 455555 55778999999998888777766432 23678889998874210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-+..|++|.+-
T Consensus 103 ~~~~g~id~lvnnA 116 (301)
T 3tjr_A 103 FRLLGGVDVVFSNA 116 (301)
T ss_dssp HHHHSSCSEEEECC
T ss_pred HHhCCCCCEEEECC
Confidence 03678888764
No 408
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=36.94 E-value=38 Score=30.05 Aligned_cols=41 Identities=24% Similarity=0.144 Sum_probs=32.6
Q ss_pred CceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCH---HHHHHHHh
Q 024811 158 HLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVS---HFLDAARE 198 (262)
Q Consensus 158 ~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~---~mld~Ar~ 198 (262)
+.+||=+|+| +|..+..+++..+.+|.+++.++ +-++.+++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~ 225 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE 225 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH
Confidence 7899999974 47777888866677999999987 77777765
No 409
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=36.69 E-value=46 Score=29.73 Aligned_cols=43 Identities=23% Similarity=0.153 Sum_probs=32.9
Q ss_pred CceeeEeeccc-cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcc
Q 024811 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLA 201 (262)
Q Consensus 158 ~~~VLDlGcGt-G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~ 201 (262)
..+|.=||||+ |. ++..++ ..+.+|.++|++++.++.+.+++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a-~~G~~V~l~D~~~~~l~~~~~~i~ 50 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENIR 50 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHH
Confidence 45788899985 33 555566 667889999999999998877664
No 410
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=36.68 E-value=61 Score=28.18 Aligned_cols=46 Identities=13% Similarity=-0.010 Sum_probs=34.8
Q ss_pred CCCCceeeEeeccc-cHHHHHHHHhc-CCcEEEEeCCHHHHHHHHhhc
Q 024811 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESL 200 (262)
Q Consensus 155 ~~~~~~VLDlGcGt-G~lt~~La~~~-~~~V~~VD~s~~mld~Ar~~l 200 (262)
..++.+||=+|+|+ |.++..+++.. +.+|.++|.+++-++.+++.-
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~G 208 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIG 208 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTT
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcC
Confidence 44678999999886 45566666444 678999999999888888753
No 411
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=36.41 E-value=1e+02 Score=25.48 Aligned_cols=73 Identities=12% Similarity=0.123 Sum_probs=48.2
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|. +++.|+ +.+.+|.+++-++.-++.+.+.+... ...+.++.+|+.+...-
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFA-KEGARVVITGRTKEKLEEAKLEIEQF-------PGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCCS-------TTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4467777754 444 455555 56788999999999888877766431 24678888998874210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 78 ~~~~g~id~lv~nA 91 (257)
T 3imf_A 78 DEKFGRIDILINNA 91 (257)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678877654
No 412
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=36.33 E-value=1.1e+02 Score=25.48 Aligned_cols=73 Identities=14% Similarity=0.129 Sum_probs=49.1
Q ss_pred CceeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|+ |+|. +++.|+ +.+.+|.+++-++.-++...+.+... ..++.++.+|+.+...-
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCA-EQGADLVLAARTVERLEDVAKQVTDT-------GRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHH-HCcCEEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 456777776 4454 455555 56788999999998888777666432 24678889998874210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 83 ~~~~g~id~lv~nA 96 (264)
T 3ucx_A 83 MKAYGRVDVVINNA 96 (264)
T ss_dssp HHHTSCCSEEEECC
T ss_pred HHHcCCCcEEEECC
Confidence 13678887664
No 413
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=36.08 E-value=1e+02 Score=25.61 Aligned_cols=73 Identities=21% Similarity=0.140 Sum_probs=47.6
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++. |. +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 29 ~k~vlITGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLG-SLGARVVLTARDVEKLRAVEREIVAA-------GGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHh-------CCceeEEEecCCCHHHHHHHHHHH
Confidence 45788778643 33 444555 45778999999998887776665431 24678888998764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 101 ~~~~g~id~lv~~A 114 (262)
T 3rkr_A 101 LAAHGRCDVLVNNA 114 (262)
T ss_dssp HHHHSCCSEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 13578887664
No 414
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=35.44 E-value=1e+02 Score=25.68 Aligned_cols=69 Identities=16% Similarity=0.112 Sum_probs=45.1
Q ss_pred CceeeEeecccc--H-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--------
Q 024811 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (262)
Q Consensus 158 ~~~VLDlGcGtG--~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-------- 226 (262)
+.+||=.|++.| . +++.|+ +.+.+|.+++-++.-++...+.+. .++.++.+|+.+...
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~----------~~~~~~~~Dl~~~~~v~~~~~~~ 98 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLH-ADGLGVVIADLAAEKGKALADELG----------NRAEFVSTNVTSEDSVLAAIEAA 98 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHC----------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHhC----------CceEEEEcCCCCHHHHHHHHHHH
Confidence 456777786443 3 455555 557789999999888777666552 257788888876421
Q ss_pred -CCCccchhhhh
Q 024811 227 -ETGRYDVIWVQ 237 (262)
Q Consensus 227 -~~~~yDlI~s~ 237 (262)
..+..|+++.+
T Consensus 99 ~~~~~id~lv~~ 110 (281)
T 3ppi_A 99 NQLGRLRYAVVA 110 (281)
T ss_dssp TTSSEEEEEEEC
T ss_pred HHhCCCCeEEEc
Confidence 11356777755
No 415
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=33.92 E-value=38 Score=29.91 Aligned_cols=40 Identities=25% Similarity=0.170 Sum_probs=32.7
Q ss_pred ceeeEeecc-ccHHH-HHHH-HhcCCc-EEEEeCCHH---HHHHHHh
Q 024811 159 LVALDCGSG-IGRIT-KNLL-IRYFNE-VDLLEPVSH---FLDAARE 198 (262)
Q Consensus 159 ~~VLDlGcG-tG~lt-~~La-~~~~~~-V~~VD~s~~---mld~Ar~ 198 (262)
.+||=+|+| .|.++ ..++ +..+.+ |.+++.+++ -++.+++
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~ 220 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE 220 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH
Confidence 899999975 47788 8888 766766 999999988 7888875
No 416
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=33.42 E-value=30 Score=37.13 Aligned_cols=44 Identities=20% Similarity=0.117 Sum_probs=36.5
Q ss_pred CceeeEeeccccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHhhcc
Q 024811 158 HLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLA 201 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~-~~V~~VD~s~~mld~Ar~~l~ 201 (262)
..+++|+=||.|.++.-|-...+ ..|.++|.++.+++.-+.|..
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p 895 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP 895 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC
Confidence 56899999999999999984333 457899999999998888763
No 417
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=32.65 E-value=1.3e+02 Score=24.57 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=46.3
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++. |+ +++.|+ +.+.+|.+++-++.-++...+.+. ..+.++.+|+.+...-
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~ 77 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFA-KGGAKVVIVDRDKAGAERVAGEIG----------DAALAVAADISKEADVDAAVEAA 77 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHC----------TTEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhC----------CceEEEEecCCCHHHHHHHHHHH
Confidence 45678788654 43 556666 557789999999888777666542 2567888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 78 ~~~~g~id~li~~A 91 (261)
T 3n74_A 78 LSKFGKVDILVNNA 91 (261)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 03578777664
No 418
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=32.51 E-value=1.3e+02 Score=25.27 Aligned_cols=73 Identities=14% Similarity=0.022 Sum_probs=47.7
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|. +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 24 ~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLA-ARGIAVYGCARDAKNVSAAVDGLRAA-------GHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4467777764 443 455555 55788999999988887776665431 34678888998874210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 96 ~~~~g~id~lv~nA 109 (279)
T 3sju_A 96 VERFGPIGILVNSA 109 (279)
T ss_dssp HHHHCSCCEEEECC
T ss_pred HHHcCCCcEEEECC
Confidence 13678877664
No 419
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=32.11 E-value=9.8 Score=34.35 Aligned_cols=43 Identities=12% Similarity=0.120 Sum_probs=32.4
Q ss_pred CceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhc
Q 024811 158 HLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESL 200 (262)
Q Consensus 158 ~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l 200 (262)
+.+||=+|+| .|+.+..++...+.+|.++|.+++-++.+++..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~ 210 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF 210 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh
Confidence 4789999974 455566666566679999999998888877654
No 420
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=31.74 E-value=1.4e+02 Score=24.55 Aligned_cols=70 Identities=19% Similarity=0.130 Sum_probs=45.3
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|+ +++.|+ +.+.+|.+++-++.-++...+.+. ..+.++.+|+.+...-
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~ 76 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYV-REGATVAIADIDIERARQAAAEIG----------PAAYAVQMDVTRQDSIDAAIAAT 76 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHC----------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhC----------CCceEEEeeCCCHHHHHHHHHHH
Confidence 4567777754 333 455555 557789999999887776665542 2467888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 77 ~~~~g~id~lv~~A 90 (259)
T 4e6p_A 77 VEHAGGLDILVNNA 90 (259)
T ss_dssp HHHSSSCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678887764
No 421
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=31.51 E-value=1.3e+02 Score=24.54 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=46.6
Q ss_pred CCceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC------C
Q 024811 157 QHLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------E 227 (262)
Q Consensus 157 ~~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~------~ 227 (262)
++.+||=.|++. |+ +++.|+ +.+.+|.+++-++.-++...+.+. ..+.++.+|+.+... .
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~ 81 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLH-KLGSKVIISGSNEEKLKSLGNALK----------DNYTIEVCNLANKEECSNLISK 81 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHC----------SSEEEEECCTTSHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhc----------cCccEEEcCCCCHHHHHHHHHh
Confidence 456788888644 33 445555 557889999999888777666542 256777888776321 1
Q ss_pred CCccchhhhhh
Q 024811 228 TGRYDVIWVQW 238 (262)
Q Consensus 228 ~~~yDlI~s~~ 238 (262)
.+..|+++.+-
T Consensus 82 ~~~id~li~~A 92 (249)
T 3f9i_A 82 TSNLDILVCNA 92 (249)
T ss_dssp CSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 14678887664
No 422
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=31.38 E-value=53 Score=29.37 Aligned_cols=42 Identities=10% Similarity=0.056 Sum_probs=33.5
Q ss_pred CCceeeEeec---cccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 157 QHLVALDCGS---GIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 157 ~~~~VLDlGc---GtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
++.+||=+|+ |+|.++..+++..+.+|.+++.+++-++.+++
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh
Confidence 4678888853 36777778886677899999999999998886
No 423
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=31.25 E-value=61 Score=29.25 Aligned_cols=91 Identities=11% Similarity=0.002 Sum_probs=56.2
Q ss_pred CceeeEeeccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhh
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~ 237 (262)
..+||.++.+.|.++-.|+ .. .++.+.-|--.-...+.|++.-. .....+++... +++. ...||+|+..
T Consensus 39 ~~~~~~~~d~~gal~~~~~-~~--~~~~~~ds~~~~~~~~~n~~~~~----~~~~~~~~~~~-~~~~---~~~~~~v~~~ 107 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALA-EH--KPYSIGDSYISELATRENLRLNG----IDESSVKFLDS-TADY---PQQPGVVLIK 107 (375)
T ss_dssp CSCEEEECCSSSHHHHHTG-GG--CCEEEESCHHHHHHHHHHHHHTT----CCGGGSEEEET-TSCC---CSSCSEEEEE
T ss_pred CCCEEEECCCCCHHHHhhc-cC--CceEEEhHHHHHHHHHHHHHHcC----CCccceEeccc-cccc---ccCCCEEEEE
Confidence 4689999999999999988 43 45566446555556667664310 01123565433 3322 2579998775
Q ss_pred hHHhhcCchhHHHHHHHHHhhccCC
Q 024811 238 WCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 238 ~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
++ -+ -.++...|..+...|+||
T Consensus 108 lp-k~--~~~l~~~L~~l~~~l~~~ 129 (375)
T 4dcm_A 108 VP-KT--LALLEQQLRALRKVVTSD 129 (375)
T ss_dssp CC-SC--HHHHHHHHHHHHTTCCTT
T ss_pred cC-CC--HHHHHHHHHHHHhhCCCC
Confidence 53 11 124456788888888775
No 424
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=31.21 E-value=1.1e+02 Score=25.66 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=44.8
Q ss_pred CceeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|+ |+|. +++.|+ +.+.+|.+++-++.-++...+.+... ....+.++.+|+.+...-
T Consensus 28 ~k~vlITGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~v~~~~~~~ 100 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLA-KMGAHVVVTARSKETLQKVVSHCLEL------GAASAHYIAGTMEDMTFAEQFVAQA 100 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHH------TCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHh------CCCceEEEeCCCCCHHHHHHHHHHH
Confidence 457887776 3443 334444 55778999999988777665544321 112577888888764210
Q ss_pred ---CCccchhhhh
Q 024811 228 ---TGRYDVIWVQ 237 (262)
Q Consensus 228 ---~~~yDlI~s~ 237 (262)
-+..|+++.+
T Consensus 101 ~~~~g~iD~li~n 113 (286)
T 1xu9_A 101 GKLMGGLDMLILN 113 (286)
T ss_dssp HHHHTSCSEEEEC
T ss_pred HHHcCCCCEEEEC
Confidence 0367887765
No 425
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=30.87 E-value=1.5e+02 Score=24.39 Aligned_cols=70 Identities=19% Similarity=0.087 Sum_probs=45.5
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|+ +++.|+ +.+.+|.+++-++..++...+.+.. .+.++.+|+.+...-
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~Dv~d~~~v~~~~~~~ 77 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLA-ERGAKVIGTATSESGAQAISDYLGD----------NGKGMALNVTNPESIEAVLKAI 77 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHGG----------GEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcc----------cceEEEEeCCCHHHHHHHHHHH
Confidence 4567777764 443 455555 5678899999998887776665532 456788888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 78 ~~~~g~iD~lv~nA 91 (248)
T 3op4_A 78 TDEFGGVDILVNNA 91 (248)
T ss_dssp HHHHCCCSEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 03678877664
No 426
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=30.37 E-value=72 Score=27.90 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=35.9
Q ss_pred CCceeeEee--ccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 157 QHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 157 ~~~~VLDlG--cGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
++.+||=+| .|+|..+..+++..+.+|.+++.+++-++.+++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 194 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM 194 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 577899884 4678999999977788999999999999888873
No 427
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=30.31 E-value=1.2e+02 Score=25.21 Aligned_cols=81 Identities=14% Similarity=0.011 Sum_probs=43.4
Q ss_pred eeeEeeccc-cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhhh
Q 024811 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (262)
Q Consensus 160 ~VLDlGcGt-G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s~ 237 (262)
+|.=||||. |. ++..|. ..+.+|.++|.+++-++.+.+. . . ... ...+..+. ...|+|+..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~~~~~~~~~~~~~-g---------~-~~~-~~~~~~~~----~~~D~vi~a 64 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLR-RRGHYLIGVSRQQSTCEKAVER-Q---------L-VDE-AGQDLSLL----QTAKIIFLC 64 (279)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHT-T---------S-CSE-EESCGGGG----TTCSEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHhC-C---------C-Ccc-ccCCHHHh----CCCCEEEEE
Confidence 355567653 22 334444 4456899999999888776542 0 0 001 12233332 257777755
Q ss_pred hHHhhcCchhHHHHHHHHHhhccCC
Q 024811 238 WCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 238 ~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
-. ...+..++..+...++||
T Consensus 65 v~-----~~~~~~~~~~l~~~~~~~ 84 (279)
T 2f1k_A 65 TP-----IQLILPTLEKLIPHLSPT 84 (279)
T ss_dssp SC-----HHHHHHHHHHHGGGSCTT
T ss_pred CC-----HHHHHHHHHHHHhhCCCC
Confidence 32 223345666666666654
No 428
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=30.19 E-value=90 Score=27.02 Aligned_cols=45 Identities=18% Similarity=0.171 Sum_probs=34.6
Q ss_pred CCCCceeeEeecc-ccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHhh
Q 024811 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 155 ~~~~~~VLDlGcG-tG~lt~~La~~~~~-~V~~VD~s~~mld~Ar~~ 199 (262)
..++.+||=.|+| .|.++..+++..+. .+.++|.+++-++.+++.
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l 204 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF 204 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc
Confidence 4467889999986 46677778866654 467899999999988874
No 429
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=29.70 E-value=84 Score=22.82 Aligned_cols=36 Identities=19% Similarity=0.130 Sum_probs=24.1
Q ss_pred CceeeEeeccccHHHHHHHH---hcCCcEEEEeCCHHHHHH
Q 024811 158 HLVALDCGSGIGRITKNLLI---RYFNEVDLLEPVSHFLDA 195 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~---~~~~~V~~VD~s~~mld~ 195 (262)
..+|+=+|+ |.++..++. ..+.+|.++|.++.-++.
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~ 44 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNA 44 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 346888886 555555542 335679999998866543
No 430
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=29.23 E-value=1.5e+02 Score=24.56 Aligned_cols=74 Identities=19% Similarity=0.083 Sum_probs=47.5
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|. +++.|+ +.+.+|.+++-++.-++.+.+.+... ...++.++.+|+.+...-
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFA-RAGANVAVAGRSTADIDACVADLDQL------GSGKVIGVQTDVSDRAQCDALAGRA 82 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTT------SSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhh------CCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4567777754 443 445555 55778999999998888776665432 113678889998874210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 83 ~~~~g~id~lvnnA 96 (262)
T 3pk0_A 83 VEEFGGIDVVCANA 96 (262)
T ss_dssp HHHHSCCSEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 13678877664
No 431
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=29.19 E-value=75 Score=27.20 Aligned_cols=85 Identities=16% Similarity=0.139 Sum_probs=46.7
Q ss_pred CceeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-----CCC
Q 024811 158 HLVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----ETG 229 (262)
Q Consensus 158 ~~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-----~~~ 229 (262)
+..+|=-|+ |+|+ +++.|+ +.+.+|.++|.+.. +.+.+.+.. ...++.++.+|+.+-.. ..+
T Consensus 9 GKvalVTGas~GIG~aiA~~la-~~Ga~Vvi~~r~~~--~~~~~~~~~-------~g~~~~~~~~Dv~d~~~v~~~~~~g 78 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLA-AAGAEVVCAARRAP--DETLDIIAK-------DGGNASALLIDFADPLAAKDSFTDA 78 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCC--HHHHHHHHH-------TTCCEEEEECCTTSTTTTTTSSTTT
T ss_pred CCEEEEeCcCCHHHHHHHHHHH-HcCCEEEEEeCCcH--HHHHHHHHH-------hCCcEEEEEccCCCHHHHHHHHHhC
Confidence 445555564 4555 455555 66888999987642 222222221 12356778888765321 225
Q ss_pred ccchhhhhh------HHhhcCchhHHHHH
Q 024811 230 RYDVIWVQW------CIGHLTDDDFVSFF 252 (262)
Q Consensus 230 ~yDlI~s~~------vl~hltD~el~~~l 252 (262)
+.|+++.|- .+..++++++.+.+
T Consensus 79 ~iDiLVNNAGi~~~~~~~~~~~~~w~~~~ 107 (247)
T 4hp8_A 79 GFDILVNNAGIIRRADSVEFSELDWDEVM 107 (247)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccccHHHHHHHH
Confidence 788887664 24455555544443
No 432
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=29.00 E-value=34 Score=34.01 Aligned_cols=45 Identities=16% Similarity=0.100 Sum_probs=37.0
Q ss_pred CCceeeEeeccccHHHHHHHHhc------CCcEEEEeCCHHHHHHHHhhcc
Q 024811 157 QHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLA 201 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt~~La~~~------~~~V~~VD~s~~mld~Ar~~l~ 201 (262)
+..+|||+=||.|.++.-|-... |.-+-++|.++.+++.-+.|..
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 35689999999999999887332 4567899999999999988864
No 433
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=28.66 E-value=1.8e+02 Score=23.96 Aligned_cols=70 Identities=17% Similarity=0.163 Sum_probs=46.0
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|. +++.|+ +.+.+|.+++-++.-++...+.+. .++.++.+|+.+...-
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLV-EGGAEVLLTGRNESNIARIREEFG----------PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHG----------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhC----------CcceEEEccCCCHHHHHHHHHHH
Confidence 4567777754 444 445555 557789999999888777666542 2578888888774210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 77 ~~~~g~id~lv~nA 90 (255)
T 4eso_A 77 GQTLGAIDLLHINA 90 (255)
T ss_dssp HHHHSSEEEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 13678877654
No 434
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=28.64 E-value=1.7e+02 Score=24.40 Aligned_cols=76 Identities=17% Similarity=0.121 Sum_probs=48.2
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ +|+ +++.|+ +.+.+|.+++-++.-++.+.+.+..... ....+.++.+|+.+...-
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLV-AAGASVMIVGRNPDKLAGAVQELEALGA----NGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTCC----SSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCC----CCceEEEEeCCCCCHHHHHHHHHHH
Confidence 4567777764 443 455555 5577899999999888777666643210 112678889998864210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 86 ~~~~g~id~lv~nA 99 (281)
T 3svt_A 86 TAWHGRLHGVVHCA 99 (281)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678877654
No 435
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=28.60 E-value=1.8e+02 Score=24.42 Aligned_cols=70 Identities=16% Similarity=0.128 Sum_probs=44.7
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++. |. +++.|+ +.+.+|.+++-+++-++...+.+ ...+.++.+|+.+...-
T Consensus 5 gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~ 73 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFV-AEGARVAVLDKSAERLRELEVAH----------GGNAVGVVGDVRSLQDQKRAAERC 73 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHT----------BTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCcCEEEEEeCCHHHHHHHHHHc----------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 44677777543 43 455555 55788999999988776655543 13577888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 74 ~~~~g~iD~lvnnA 87 (281)
T 3zv4_A 74 LAAFGKIDTLIPNA 87 (281)
T ss_dssp HHHHSCCCEEECCC
T ss_pred HHhcCCCCEEEECC
Confidence 13678777664
No 436
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=28.53 E-value=1.2e+02 Score=25.56 Aligned_cols=73 Identities=15% Similarity=0.064 Sum_probs=47.7
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ +|+ +++.|+ +.+.+|.+++-++..++...+.+... ..++.++.+|+.+...-
T Consensus 32 gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYA-EAGAQVAVAARHSDALQVVADEIAGV-------GGKALPIRCDVTQPDQVRGMLDQM 103 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHHHT-------TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4577777764 343 455555 55788999999888877776665432 23577888898874210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 104 ~~~~g~iD~lvnnA 117 (276)
T 3r1i_A 104 TGELGGIDIAVCNA 117 (276)
T ss_dssp HHHHSCCSEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678888764
No 437
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=28.22 E-value=1.8e+02 Score=25.19 Aligned_cols=91 Identities=14% Similarity=0.035 Sum_probs=48.7
Q ss_pred CceeeEeecc-cc-HHHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCC--cceEEEEcCCCCCCCCCCccch
Q 024811 158 HLVALDCGSG-IG-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH--KATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 158 ~~~VLDlGcG-tG-~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~--~~v~f~~~d~~~~~~~~~~yDl 233 (262)
..+|.=+|+| .| .++..|+ +.+.+|+++ .+++-++..++.=.... ..... ..+.+ ..+.+. ...+|+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~-~~G~~V~l~-~~~~~~~~i~~~g~~~~--~~~~~~~~~~~~-~~~~~~----~~~~D~ 89 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLA-RAGHEVILI-ARPQHVQAIEATGLRLE--TQSFDEQVKVSA-SSDPSA----VQGADL 89 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHH-HTTCEEEEE-CCHHHHHHHHHHCEEEE--CSSCEEEECCEE-ESCGGG----GTTCSE
T ss_pred CCcEEEECcCHHHHHHHHHHH-HCCCeEEEE-EcHhHHHHHHhCCeEEE--cCCCcEEEeeee-eCCHHH----cCCCCE
Confidence 4578888887 33 3455555 567789999 88888877765311000 00000 00111 122221 146888
Q ss_pred hhhhhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 234 IWVQWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 234 I~s~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
|+..-.- .++..+++.+...|+|+
T Consensus 90 vilavk~-----~~~~~~l~~l~~~l~~~ 113 (318)
T 3hwr_A 90 VLFCVKS-----TDTQSAALAMKPALAKS 113 (318)
T ss_dssp EEECCCG-----GGHHHHHHHHTTTSCTT
T ss_pred EEEEccc-----ccHHHHHHHHHHhcCCC
Confidence 7765322 23347778887777664
No 438
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=28.11 E-value=1.8e+02 Score=23.53 Aligned_cols=73 Identities=19% Similarity=0.150 Sum_probs=43.9
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ +|+ +++.|+ +.+.+|.+++-++.-++...+.+... ..++.++.+|+.+...-
T Consensus 13 ~k~vlItGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALA-EAGARVIIADLDEAMATKAVEDLRME-------GHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCceEEEEecCCCHHHHHHHHHHH
Confidence 4567777753 333 334444 45778999999887766555544321 23578888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
.++.|+|+.+-
T Consensus 85 ~~~~~~id~vi~~A 98 (260)
T 3awd_A 85 HEQEGRVDILVACA 98 (260)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 02578887664
No 439
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=28.11 E-value=63 Score=28.66 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=35.3
Q ss_pred CCceeeEee--ccccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHh
Q 024811 157 QHLVALDCG--SGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 157 ~~~~VLDlG--cGtG~lt~~La~~-~~~~V~~VD~s~~mld~Ar~ 198 (262)
++.+||=+| .|+|.++..+++. .+.+|.+++.+++-++.+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 567899988 4679999999965 47799999999998888876
No 440
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=28.00 E-value=2e+02 Score=24.19 Aligned_cols=73 Identities=19% Similarity=0.146 Sum_probs=47.8
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+..+|=.|++ +|. +++.|+ +.+.+|.+++-++..++...+.+... ...+.++.+|+.+...-
T Consensus 28 ~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALA-ADGVTVGALGRTRTEVEEVADEIVGA-------GGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHTTT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4567777754 444 445555 55778999999998888777766431 34678888898764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 100 ~~~~g~iD~lVnnA 113 (283)
T 3v8b_A 100 VLKFGHLDIVVANA 113 (283)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 13678877664
No 441
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=27.78 E-value=55 Score=28.05 Aligned_cols=86 Identities=17% Similarity=0.119 Sum_probs=53.7
Q ss_pred CceeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC--------
Q 024811 158 HLVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (262)
Q Consensus 158 ~~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-------- 226 (262)
+..+|=-|+ |+|+ +++.|+ +.+.+|.++|.+++.++.+.+.+... ..++.++.+|+.+...
T Consensus 9 gKvalVTGas~GIG~aia~~la-~~Ga~Vvi~~~~~~~~~~~~~~l~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLA-AAGARVILNDIRATLLAESVDTLTRK-------GYDAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHHHT-------TCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEeeCCCHHHHHHHHHHH
Confidence 445666664 4454 455555 66889999999999888777766432 2356777888876321
Q ss_pred --CCCccchhhhhh------HHhhcCchhHHHH
Q 024811 227 --ETGRYDVIWVQW------CIGHLTDDDFVSF 251 (262)
Q Consensus 227 --~~~~yDlI~s~~------vl~hltD~el~~~ 251 (262)
.-++.|++|.+- .+..++++++.+.
T Consensus 81 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~ 113 (255)
T 4g81_D 81 DAEGIHVDILINNAGIQYRKPMVELELENWQKV 113 (255)
T ss_dssp HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHH
T ss_pred HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHH
Confidence 115678877654 2444555554443
No 442
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=27.72 E-value=97 Score=29.25 Aligned_cols=77 Identities=10% Similarity=-0.136 Sum_probs=42.4
Q ss_pred CceeeEee-ccccHHH-HHHHHhcCCcEEEEeCC--HHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 158 HLVALDCG-SGIGRIT-KNLLIRYFNEVDLLEPV--SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 158 ~~~VLDlG-cGtG~lt-~~La~~~~~~V~~VD~s--~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
..+|.=+| ||+|.-+ ..++.+.+.+|.+.|.. +.+.+..++. .+.++.+.-.+. . ...+|+
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~-------------gi~~~~G~~~~~-~-~~~~d~ 83 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQA-------------GVTIEEGYLIAH-L-QPAPDL 83 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHT-------------TCEEEESCCGGG-G-CSCCSE
T ss_pred CCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHC-------------CCEEECCCCHHH-c-CCCCCE
Confidence 45677777 6778632 34444778899999985 3444433331 345554421111 1 135898
Q ss_pred hhhhhHHhhcCchhHHH
Q 024811 234 IWVQWCIGHLTDDDFVS 250 (262)
Q Consensus 234 I~s~~vl~hltD~el~~ 250 (262)
||.+..+. .+.+++.+
T Consensus 84 vV~Spgi~-~~~p~l~~ 99 (524)
T 3hn7_A 84 VVVGNAMK-RGMDVIEY 99 (524)
T ss_dssp EEECTTCC-TTSHHHHH
T ss_pred EEECCCcC-CCCHHHHH
Confidence 88776542 23344433
No 443
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=27.62 E-value=64 Score=27.65 Aligned_cols=40 Identities=20% Similarity=0.131 Sum_probs=26.8
Q ss_pred ceeeEeecc-ccH-HHHHHHHhcCC---cEEEEeCCHHHHHHHHhh
Q 024811 159 LVALDCGSG-IGR-ITKNLLIRYFN---EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 159 ~~VLDlGcG-tG~-lt~~La~~~~~---~V~~VD~s~~mld~Ar~~ 199 (262)
.+|.=|||| .|. ++..|+ +.+. +|.+.|.+++-++.+.+.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~-~~g~~~~~V~v~dr~~~~~~~l~~~ 48 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLI-ANGYDPNRICVTNRSLDKLDFFKEK 48 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHH-HTTCCGGGEEEECSSSHHHHHHHHT
T ss_pred CEEEEEcccHHHHHHHHHHH-HCCCCCCeEEEEeCCHHHHHHHHHH
Confidence 357778886 232 444455 3344 799999999988877764
No 444
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=27.51 E-value=2e+02 Score=23.53 Aligned_cols=73 Identities=19% Similarity=0.153 Sum_probs=44.9
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|+ +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALA-AEGAAVAIAARRVEKLRALGDELTAA-------GAKVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4467777754 333 344455 55778999999888777665555321 23567888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-+..|+++.+-
T Consensus 79 ~~~~g~id~lv~nA 92 (247)
T 2jah_A 79 VEALGGLDILVNNA 92 (247)
T ss_dssp HHHHSCCSEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 03678877654
No 445
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=27.21 E-value=1.6e+02 Score=24.87 Aligned_cols=70 Identities=21% Similarity=0.125 Sum_probs=45.7
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ +|+ +++.|+ +.+.+|.+++-++.-++...+.+. ..+.++.+|+.+...-
T Consensus 29 gk~vlVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~~ 97 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLA-DEGCHVLCADIDGDAADAAATKIG----------CGAAACRVDVSDEQQIIAMVDAC 97 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHC----------SSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcC----------CcceEEEecCCCHHHHHHHHHHH
Confidence 4567777764 444 555566 567899999999887776665542 2567888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 98 ~~~~g~iD~lvnnA 111 (277)
T 3gvc_A 98 VAAFGGVDKLVANA 111 (277)
T ss_dssp HHHHSSCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678777664
No 446
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=27.04 E-value=1e+02 Score=28.33 Aligned_cols=69 Identities=13% Similarity=0.007 Sum_probs=38.9
Q ss_pred CceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCH----HHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccc
Q 024811 158 HLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVS----HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (262)
Q Consensus 158 ~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~----~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yD 232 (262)
+.+|+=+|.| +|.-+..++.+.+.+|++.|..+ .+.+..++. .+.++.+...+-.. .+.+|
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~-------------gi~~~~g~~~~~~~-~~~~d 74 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE-------------GIKVVCGSHPLELL-DEDFC 74 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT-------------TCEEEESCCCGGGG-GSCEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC-------------CCEEEECCChHHhh-cCCCC
Confidence 4567777754 55555555557789999999854 233332221 34555443221111 12389
Q ss_pred hhhhhhHH
Q 024811 233 VIWVQWCI 240 (262)
Q Consensus 233 lI~s~~vl 240 (262)
+||.+..+
T Consensus 75 ~vv~spgi 82 (451)
T 3lk7_A 75 YMIKNPGI 82 (451)
T ss_dssp EEEECTTS
T ss_pred EEEECCcC
Confidence 98887654
No 447
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=26.97 E-value=1.7e+02 Score=24.33 Aligned_cols=74 Identities=22% Similarity=0.186 Sum_probs=46.3
Q ss_pred CceeeEeec--cccH-HHHHHHHhcCCcEEEEeCC------------HHHHHHHHhhcccccccCCCCCcceEEEEcCCC
Q 024811 158 HLVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (262)
Q Consensus 158 ~~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s------------~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~ 222 (262)
+.+||=.|+ |+|+ +++.|+ +.+.+|.++|.+ ..-++.+...+... ..++.++.+|+.
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~ 81 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLA-EEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-------GRKAYTAEVDVR 81 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-------TSCEEEEECCTT
T ss_pred CCEEEEeCCCChHHHHHHHHHH-HCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-------CCceEEEEccCC
Confidence 456777776 4444 455555 567889999876 66666555544321 246788889988
Q ss_pred CCCCC----------CCccchhhhhhH
Q 024811 223 DFTPE----------TGRYDVIWVQWC 239 (262)
Q Consensus 223 ~~~~~----------~~~yDlI~s~~v 239 (262)
+...- -++.|++|.+-.
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 74210 036788887643
No 448
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=26.58 E-value=78 Score=28.05 Aligned_cols=43 Identities=16% Similarity=0.187 Sum_probs=34.2
Q ss_pred CCCCceeeEee--ccccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 155 ~~~~~~VLDlG--cGtG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
..++.+||=.| .|+|..+..+++..+.+|.+++ ++.-++.+++
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~ 225 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK 225 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH
Confidence 34678999998 5689999999977777898888 7777777754
No 449
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=26.11 E-value=1.7e+02 Score=23.51 Aligned_cols=73 Identities=22% Similarity=0.218 Sum_probs=45.1
Q ss_pred eeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-----C----
Q 024811 160 VALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E---- 227 (262)
Q Consensus 160 ~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-----~---- 227 (262)
++|=.|+ |+|. +++.|+ +.+.+|.+++-++.-++...+.+... ....+.++.+|+.+... .
T Consensus 4 ~vlITGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALA-RDGYALALGARSVDRLEKIAHELMQE------QGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHH------HCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhh------cCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 4565664 3444 455555 55778999999988777666555311 12367788888876421 1
Q ss_pred -CCccchhhhhhH
Q 024811 228 -TGRYDVIWVQWC 239 (262)
Q Consensus 228 -~~~yDlI~s~~v 239 (262)
-++.|+++.+-.
T Consensus 77 ~~g~id~li~~Ag 89 (235)
T 3l77_A 77 RFGDVDVVVANAG 89 (235)
T ss_dssp HHSSCSEEEECCC
T ss_pred hcCCCCEEEECCc
Confidence 036788887643
No 450
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=26.02 E-value=1.8e+02 Score=23.47 Aligned_cols=73 Identities=11% Similarity=-0.007 Sum_probs=42.9
Q ss_pred CceeeEeeccccHHHHHHHH---hcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGIGRITKNLLI---RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~---~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|+ +|.++..+++ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 11 ~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 82 (255)
T 1fmc_A 11 GKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-------GGQAFACRCDITSEQELSALADFA 82 (255)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-------CCceEEEEcCCCCHHHHHHHHHHH
Confidence 456777775 3444444332 44678999999887766555544321 23567888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
.+..|+||.+-
T Consensus 83 ~~~~~~~d~vi~~A 96 (255)
T 1fmc_A 83 ISKLGKVDILVNNA 96 (255)
T ss_dssp HHHHSSCCEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 02578777653
No 451
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=25.92 E-value=2e+02 Score=23.78 Aligned_cols=73 Identities=14% Similarity=0.080 Sum_probs=44.7
Q ss_pred CceeeEeeccccHHHHHHHH---hcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGIGRITKNLLI---RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~---~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ |.++..+++ +.+.+|.+++-++.-++...+.+... ..++.++.+|+.+...-
T Consensus 31 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 31 GEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-------GAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-------CCeEEEEEeeCCCHHHHHHHHHHH
Confidence 4567777753 334443332 45778999999887776665554321 23578888898764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-+..|+||.+-
T Consensus 103 ~~~~g~iD~li~~A 116 (272)
T 1yb1_A 103 KAEIGDVSILVNNA 116 (272)
T ss_dssp HHHTCCCSEEEECC
T ss_pred HHHCCCCcEEEECC
Confidence 13678887664
No 452
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=25.73 E-value=2e+02 Score=23.96 Aligned_cols=73 Identities=19% Similarity=0.069 Sum_probs=44.7
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-----C--
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E-- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-----~-- 227 (262)
+.+||=.|++ +|+ +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+... .
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLG-KEGLRVFVCARGEEGLRTTLKELREA-------GVEADGRTCDVRSVPEIEALVAAV 93 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCceEEEECCCCCHHHHHHHHHHH
Confidence 4467777754 333 344444 55778999999987776655554321 2356788888876421 0
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-+..|++|.+-
T Consensus 94 ~~~~g~iD~lv~~A 107 (277)
T 2rhc_B 94 VERYGPVDVLVNNA 107 (277)
T ss_dssp HHHTCSCSEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 13678887664
No 453
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=25.52 E-value=1.9e+02 Score=23.90 Aligned_cols=75 Identities=17% Similarity=0.079 Sum_probs=46.2
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCC------------HHHHHHHHhhcccccccCCCCCcceEEEEcCCC
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s------------~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~ 222 (262)
+.+||=.|++ +|. +++.|+ +.+.+|.+++.+ ++-++...+.+... ..++.++.+|+.
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~ 84 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLA-ADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-------GSRIVARQADVR 84 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-------TCCEEEEECCTT
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-------CCeEEEEeCCCC
Confidence 4577877864 443 555555 567889999876 56565555444321 236788889988
Q ss_pred CCCCC----------CCccchhhhhhHH
Q 024811 223 DFTPE----------TGRYDVIWVQWCI 240 (262)
Q Consensus 223 ~~~~~----------~~~yDlI~s~~vl 240 (262)
+...- -++.|++|.+-.+
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 64210 0367888776543
No 454
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=25.49 E-value=1.4e+02 Score=25.41 Aligned_cols=74 Identities=19% Similarity=0.095 Sum_probs=48.1
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ +|. +++.|+ +.+.+|.+++-++.-++...+.+... ....+.++.+|+.+...-
T Consensus 41 ~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~Dv~d~~~v~~~~~~~ 113 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFA-RAGANVAVAARSPRELSSVTAELGEL------GAGNVIGVRLDVSDPGSCADAARTV 113 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHTTS------SSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhh------CCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 4567777764 444 455555 56778999999988877776666432 113678889999874210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 114 ~~~~g~iD~lvnnA 127 (293)
T 3rih_A 114 VDAFGALDVVCANA 127 (293)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678877664
No 455
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=25.48 E-value=2.2e+02 Score=23.35 Aligned_cols=73 Identities=15% Similarity=0.078 Sum_probs=44.8
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ +|+ +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 80 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELA-SLGASVYTCSRNQKELNDCLTQWRSK-------GFKVEASVCDLSSRSERQELMNTV 80 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4467777753 333 444455 55778999999887776655544321 23577888888764210
Q ss_pred ---C-Cccchhhhhh
Q 024811 228 ---T-GRYDVIWVQW 238 (262)
Q Consensus 228 ---~-~~yDlI~s~~ 238 (262)
- ++.|+++.+-
T Consensus 81 ~~~~~g~id~lv~~A 95 (260)
T 2ae2_A 81 ANHFHGKLNILVNNA 95 (260)
T ss_dssp HHHTTTCCCEEEECC
T ss_pred HHHcCCCCCEEEECC
Confidence 0 4678877664
No 456
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=25.37 E-value=1.2e+02 Score=25.74 Aligned_cols=73 Identities=16% Similarity=0.096 Sum_probs=47.2
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ +|. +++.|+ +.+.+|.+++-++.-++...+.+.. ....+.++.+|+.+...-
T Consensus 8 gk~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFA-REGAKVVVTARNGNALAELTDEIAG-------GGGEAAALAGDVGDEALHEALVELA 79 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHTT-------TTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4567777754 444 455555 5677899999999888777666532 134677888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 80 ~~~~g~iD~lvnnA 93 (280)
T 3tox_A 80 VRRFGGLDTAFNNA 93 (280)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678877654
No 457
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=24.81 E-value=1.2e+02 Score=25.59 Aligned_cols=73 Identities=19% Similarity=0.106 Sum_probs=47.2
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|+ +++.|+ +.+.+|.+++-++..++...+.+... ...+.++.+|+.+...-
T Consensus 4 ~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELG-VAGAKILLGARRQARIEAIATEIRDA-------GGTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3456767754 444 455555 56788999999998888777666432 23577888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 76 ~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 76 VDTWGRIDVLVNNA 89 (264)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678877664
No 458
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=24.80 E-value=1.1e+02 Score=25.29 Aligned_cols=73 Identities=18% Similarity=0.121 Sum_probs=47.4
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|+ +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFA-KAGASVVVTDLKSEGAEAVAAAIRQA-------GGKAIGLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHH-HHTCEEEEEESSHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4567777754 343 455555 55778999999998887776665432 23678888888774210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 84 ~~~~g~id~lv~nA 97 (256)
T 3gaf_A 84 LDQFGKITVLVNNA 97 (256)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 03678877664
No 459
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=24.66 E-value=48 Score=29.33 Aligned_cols=33 Identities=27% Similarity=0.254 Sum_probs=24.7
Q ss_pred CceeeEeeccccHHHHH--HHHhcC--CcEEEEeCCHH
Q 024811 158 HLVALDCGSGIGRITKN--LLIRYF--NEVDLLEPVSH 191 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~--La~~~~--~~V~~VD~s~~ 191 (262)
+.+|+=||+|+|.++.. |. +.. .+|++||+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~-~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIK-LADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHH-hcCcCCeEEEEeCCCC
Confidence 45899999999987655 44 333 37999998864
No 460
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=24.65 E-value=2.4e+02 Score=23.19 Aligned_cols=73 Identities=19% Similarity=0.213 Sum_probs=45.1
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|. +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLA-EEGTAIALLDMNREALEKAEASVREK-------GVEARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTT-------TSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEecCCCHHHHHHHHHHH
Confidence 4467777753 443 344444 55778999999987777665554321 23577888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-+..|++|.+-
T Consensus 79 ~~~~g~id~lv~nA 92 (262)
T 1zem_A 79 VRDFGKIDFLFNNA 92 (262)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 13678877654
No 461
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=24.62 E-value=2.5e+02 Score=23.15 Aligned_cols=70 Identities=17% Similarity=0.115 Sum_probs=42.4
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ +|+ +++.|+ +.+.+|.+++-++.-++...+.+. ..+.++.+|+.+...-
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~ 75 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMV-AEGAKVVFGDILDEEGKAMAAELA----------DAARYVHLDVTQPAQWKAAVDTA 75 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTG----------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhh----------cCceEEEecCCCHHHHHHHHHHH
Confidence 4467777753 343 444555 557789999988877665544432 1367778888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-+..|+++.+-
T Consensus 76 ~~~~g~iD~lv~~A 89 (260)
T 1nff_A 76 VTAFGGLHVLVNNA 89 (260)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 02578777664
No 462
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=24.59 E-value=2.3e+02 Score=23.38 Aligned_cols=75 Identities=19% Similarity=0.044 Sum_probs=47.7
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+..+|=.|++ +|+ +++.|+ +.+.+|.+++-++.-++.+.+.+.... ...++.++.+|+.+...-
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLL-EAGAAVAFCARDGERLRAAESALRQRF-----PGARLFASVCDVLDALQVRAFAEAC 81 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHS-----TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCceEEEEeCCCCCHHHHHHHHHHH
Confidence 4567777764 443 455555 557789999999988877766654310 122478888898874210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 82 ~~~~g~id~lvnnA 95 (265)
T 3lf2_A 82 ERTLGCASILVNNA 95 (265)
T ss_dssp HHHHCSCSEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678877664
No 463
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=24.55 E-value=2.2e+02 Score=23.17 Aligned_cols=67 Identities=18% Similarity=0.138 Sum_probs=41.8
Q ss_pred eeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC---------
Q 024811 160 VALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--------- 227 (262)
Q Consensus 160 ~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~--------- 227 (262)
+||=.|+ |+|+ +++.|+ +.+.+|.+++-++.-++...+.+ ....++.+|+.+...-
T Consensus 4 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~ 71 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFL-EAGDKVCFIDIDEKRSADFAKER-----------PNLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHTTC-----------TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhc-----------ccCCeEEeeCCCHHHHHHHHHHHHH
Confidence 4565664 4444 455555 56788999999987776655443 2456888888764210
Q ss_pred -CCccchhhhhh
Q 024811 228 -TGRYDVIWVQW 238 (262)
Q Consensus 228 -~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 72 ~~g~id~lv~nA 83 (247)
T 3dii_A 72 KLQRIDVLVNNA 83 (247)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 03678877664
No 464
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=24.10 E-value=1.8e+02 Score=24.03 Aligned_cols=75 Identities=20% Similarity=0.169 Sum_probs=45.2
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++. |+ +++.|+ +.+.+|.+++-++.-++...+.+.... ...++.++.+|+.+...-
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~ 86 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLA-AEGAKLSLVDVSSEGLEASKAAVLETA-----PDAEVLTTVADVSDEAQVEAYVTAT 86 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHC-----TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhc-----CCceEEEEEccCCCHHHHHHHHHHH
Confidence 45677777543 33 444555 557789999999887766555443210 023577888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 87 ~~~~g~id~lv~nA 100 (267)
T 1iy8_A 87 TERFGRIDGFFNNA 100 (267)
T ss_dssp HHHHSCCSEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 03578887664
No 465
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=23.94 E-value=1.7e+02 Score=24.48 Aligned_cols=74 Identities=19% Similarity=0.115 Sum_probs=46.4
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|. +++.|+ +.+.+|.+++-+..-++.+.+.+... ...++.++.+|+.+...-
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFM-RHGCHTVIASRSLPRVLTAARKLAGA------TGRRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-TTTCEEEEEESCHHHHHHHHHHHHHH------HSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHh------cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4567877764 343 445555 55778999999987776665554321 123578888898764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 100 ~~~~g~id~lv~nA 113 (277)
T 4fc7_A 100 LKEFGRIDILINCA 113 (277)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678877664
No 466
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.93 E-value=2.1e+02 Score=23.81 Aligned_cols=76 Identities=18% Similarity=0.153 Sum_probs=45.2
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|. +++.|+ +.+.+|.+++-++.-++...+.+.... .....+.++.+|+.+...-
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFA-QEGANVTITGRSSERLEETRQIILKSG----VSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTT----CCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCcceEEEEecCCCHHHHHHHHHHH
Confidence 3467766754 343 444555 557789999999887766655543210 0011578888998764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 81 ~~~~g~iD~lv~nA 94 (280)
T 1xkq_A 81 LKQFGKIDVLVNNA 94 (280)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 03578887664
No 467
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=23.93 E-value=2.3e+02 Score=23.79 Aligned_cols=70 Identities=17% Similarity=0.110 Sum_probs=44.6
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|. +++.|+ +.+.+|.+++.++..++...+.+. ..+.++.+|+.+...-
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~~ 95 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFA-KNGAYVVVADVNEDAAVRVANEIG----------SKAFGVRVDVSSAKDAESMVEKT 95 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHC----------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhC----------CceEEEEecCCCHHHHHHHHHHH
Confidence 4567777764 343 455555 557789999999877766555431 2567788888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 96 ~~~~g~iD~lv~nA 109 (277)
T 4dqx_A 96 TAKWGRVDVLVNNA 109 (277)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 03678777664
No 468
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=23.29 E-value=1.6e+02 Score=24.09 Aligned_cols=29 Identities=24% Similarity=0.312 Sum_probs=22.8
Q ss_pred CceeeEeeccccHHHHHHHHhcCC--cEEEEe
Q 024811 158 HLVALDCGSGIGRITKNLLIRYFN--EVDLLE 187 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~~~~--~V~~VD 187 (262)
.+.|||+|-|.||.=-+|- +.++ +|.++|
T Consensus 41 ~GpVlElGLGNGRTydHLR-e~~P~R~I~vfD 71 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLR-QHVQGREIYVFE 71 (174)
T ss_dssp CSCEEEECCTTCHHHHHHH-HHCCSSCEEEEE
T ss_pred CCceEEecCCCChhHHHHH-HhCCCCcEEEEE
Confidence 5689999999999888888 5554 566665
No 469
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=23.25 E-value=2.2e+02 Score=23.63 Aligned_cols=70 Identities=20% Similarity=0.096 Sum_probs=45.1
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++. |+ +++.|+ +.+.+|.+++-++.-++...+.+. ..+.++.+|+.+...-
T Consensus 27 gk~vlVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~~ 95 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFH-AQGAIVGLHGTREDKLKEIAADLG----------KDVFVFSANLSDRKSIKQLAEVA 95 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHC----------SSEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhC----------CceEEEEeecCCHHHHHHHHHHH
Confidence 45777777643 43 445555 557889999998887776654431 2577888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 96 ~~~~g~iD~lvnnA 109 (266)
T 3grp_A 96 EREMEGIDILVNNA 109 (266)
T ss_dssp HHHHTSCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 03678877664
No 470
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=23.15 E-value=25 Score=29.43 Aligned_cols=39 Identities=15% Similarity=0.059 Sum_probs=25.7
Q ss_pred eeeEeeccc-c-HHHHHHHHhcCC----cEEEEeCCHHHHHHHHhh
Q 024811 160 VALDCGSGI-G-RITKNLLIRYFN----EVDLLEPVSHFLDAARES 199 (262)
Q Consensus 160 ~VLDlGcGt-G-~lt~~La~~~~~----~V~~VD~s~~mld~Ar~~ 199 (262)
+|.=||||. | .++..|+ +.+. +|.+.|.+++-++.+.+.
T Consensus 4 ~i~iIG~G~mG~~~a~~l~-~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMI-NKNIVSSNQIICSDLNTANLKNASEK 48 (247)
T ss_dssp CEEEECCSHHHHHHHHHHH-HTTSSCGGGEEEECSCHHHHHHHHHH
T ss_pred eEEEECccHHHHHHHHHHH-hCCCCCCCeEEEEeCCHHHHHHHHHH
Confidence 466677662 3 2444555 4444 899999999888777653
No 471
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=23.12 E-value=2.6e+02 Score=23.19 Aligned_cols=73 Identities=21% Similarity=0.119 Sum_probs=44.6
Q ss_pred CceeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|+ |+|+ +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELA-GLGARVYTCSRNEKELDECLEIWREK-------GLNVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCceEEEECCCCCHHHHHHHHHHH
Confidence 456777775 3443 444444 55778999999987776655544321 23567888888764210
Q ss_pred ----CCccchhhhhh
Q 024811 228 ----TGRYDVIWVQW 238 (262)
Q Consensus 228 ----~~~yDlI~s~~ 238 (262)
.++.|+++.+-
T Consensus 93 ~~~~~g~id~lv~nA 107 (273)
T 1ae1_A 93 AHVFDGKLNILVNNA 107 (273)
T ss_dssp HHHTTSCCCEEEECC
T ss_pred HHHcCCCCcEEEECC
Confidence 04678777664
No 472
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=23.02 E-value=1e+02 Score=27.20 Aligned_cols=41 Identities=20% Similarity=0.071 Sum_probs=30.7
Q ss_pred ceeeEeeccc--cHHHHHHHHhcCCcEEEEeCCHHHHHHHHhhc
Q 024811 159 LVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESL 200 (262)
Q Consensus 159 ~~VLDlGcGt--G~lt~~La~~~~~~V~~VD~s~~mld~Ar~~l 200 (262)
.+|-=||+|. +.++..|+ ..+.+|.+.|.+++.++.+.+.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la-~~G~~V~l~d~~~~~~~~~~~~i 49 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENI 49 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHH
Confidence 4677788874 34566666 55778999999999999887653
No 473
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=22.98 E-value=1.3e+02 Score=25.23 Aligned_cols=66 Identities=9% Similarity=-0.041 Sum_probs=36.3
Q ss_pred CCceeeEeeccccHHH-HHHHHhcCCcEEEEeCCH--HHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccch
Q 024811 157 QHLVALDCGSGIGRIT-KNLLIRYFNEVDLLEPVS--HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (262)
Q Consensus 157 ~~~~VLDlGcGtG~lt-~~La~~~~~~V~~VD~s~--~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDl 233 (262)
.+.+||=+|+|.=... ..++.+.+..|++|++.. ...+.+.+ ..+.++...+..-.. ..+|+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~-------------~~i~~i~~~~~~~dL--~~adL 94 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAK-------------GQLRVKRKKVGEEDL--LNVFF 94 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHT-------------TSCEEECSCCCGGGS--SSCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHc-------------CCcEEEECCCCHhHh--CCCCE
Confidence 3678999998743222 222325678999997643 33233222 135555544443222 35888
Q ss_pred hhhh
Q 024811 234 IWVQ 237 (262)
Q Consensus 234 I~s~ 237 (262)
|++.
T Consensus 95 VIaA 98 (223)
T 3dfz_A 95 IVVA 98 (223)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8765
No 474
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=22.96 E-value=2.7e+02 Score=23.17 Aligned_cols=73 Identities=18% Similarity=0.167 Sum_probs=45.5
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCC----------------HHHHHHHHhhcccccccCCCCCcceEEEE
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPV----------------SHFLDAARESLAPENHMAPDMHKATNFFC 218 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s----------------~~mld~Ar~~l~~a~~~~~~~~~~v~f~~ 218 (262)
+.++|=.|++ +|. +++.|+ +.+.+|.++|.+ ++-++...+.+.. ....+.++.
T Consensus 11 ~k~~lVTGas~gIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 82 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLA-QEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG-------HNRRIVTAE 82 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT-------TTCCEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh-------cCCceEEEE
Confidence 4567777864 444 555565 567889999876 5555555544432 124678888
Q ss_pred cCCCCCCCC----------CCccchhhhhh
Q 024811 219 VPLQDFTPE----------TGRYDVIWVQW 238 (262)
Q Consensus 219 ~d~~~~~~~----------~~~yDlI~s~~ 238 (262)
+|+.+...- -++.|++|.+-
T Consensus 83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 112 (286)
T 3uve_A 83 VDVRDYDALKAAVDSGVEQLGRLDIIVANA 112 (286)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 998874210 13678887764
No 475
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.85 E-value=2.7e+02 Score=23.05 Aligned_cols=71 Identities=17% Similarity=0.076 Sum_probs=44.6
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|. +++.|+ +.+.+|.+++-++.-++...+.+. ..+.++.+|+.+...-
T Consensus 6 ~k~vlITGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~ 74 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFA-REGASLVAVDREERLLAEAVAALE----------AEAIAVVADVSDPKAVEAVFAEA 74 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTCC----------SSEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhc----------CceEEEEcCCCCHHHHHHHHHHH
Confidence 4467777753 343 444455 557789999998877766555442 2567888888764210
Q ss_pred ---CCccchhhhhhH
Q 024811 228 ---TGRYDVIWVQWC 239 (262)
Q Consensus 228 ---~~~yDlI~s~~v 239 (262)
-++.|+++.+-.
T Consensus 75 ~~~~g~iD~lvnnAg 89 (263)
T 2a4k_A 75 LEEFGRLHGVAHFAG 89 (263)
T ss_dssp HHHHSCCCEEEEGGG
T ss_pred HHHcCCCcEEEECCC
Confidence 135788887654
No 476
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=22.73 E-value=2.8e+02 Score=22.24 Aligned_cols=70 Identities=17% Similarity=0.136 Sum_probs=41.0
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcce-EEEEcCCCCCCCC------
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKAT-NFFCVPLQDFTPE------ 227 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v-~f~~~d~~~~~~~------ 227 (262)
+.+||=.|++. |+ +++.|+ +.+.+|.+++-++.-++...+.+. ..+ .++.+|+.+...-
T Consensus 11 ~k~vlITGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~ 79 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFA-ASGARLILIDREAAALDRAAQELG----------AAVAARIVADVTDAEAMTAAAAE 79 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHG----------GGEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhc----------ccceeEEEEecCCHHHHHHHHHH
Confidence 45677777533 22 334444 456789999988876665554431 134 6778888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+|+.+-
T Consensus 80 ~~~~~~id~li~~A 93 (254)
T 2wsb_A 80 AEAVAPVSILVNSA 93 (254)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHhhCCCcEEEECC
Confidence 03567777654
No 477
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=22.52 E-value=2.5e+02 Score=23.66 Aligned_cols=73 Identities=19% Similarity=0.184 Sum_probs=45.4
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCC------------HHHHHHHHhhcccccccCCCCCcceEEEEcCCC
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s------------~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~ 222 (262)
+..+|=.|++ +|. +++.|+ +.+.+|.++|.+ +.-++...+.+... ..++.++.+|+.
T Consensus 28 gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~ 99 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLA-REGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-------GRRIIASQVDVR 99 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-------TCCEEEEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-------CCceEEEECCCC
Confidence 4567777764 444 455555 567889999876 55555555544321 236788889988
Q ss_pred CCCCC----------CCccchhhhhh
Q 024811 223 DFTPE----------TGRYDVIWVQW 238 (262)
Q Consensus 223 ~~~~~----------~~~yDlI~s~~ 238 (262)
+...- -++.|++|.+-
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nA 125 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANA 125 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 74210 13678877664
No 478
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=22.44 E-value=1.3e+02 Score=24.11 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=41.7
Q ss_pred eeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC-------CCCc
Q 024811 161 ALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------ETGR 230 (262)
Q Consensus 161 VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~-------~~~~ 230 (262)
||=.|+ |+|. +++.|+ +.+.+|.+++-++.-++...+.+. .++.++.+|+.+... -...
T Consensus 4 vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~ 72 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYD-AEGKATYLTGRSESKLSTVTNCLS----------NNVGYRARDLASHQEVEQLFEQLDSI 72 (230)
T ss_dssp EEEESTTSHHHHHHHHHHH-HTTCCEEEEESCHHHHHHHHHTCS----------SCCCEEECCTTCHHHHHHHHHSCSSC
T ss_pred EEEecCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHh----------hccCeEeecCCCHHHHHHHHHHHhhc
Confidence 444454 4444 444555 557789999999988877766542 256778888876421 1134
Q ss_pred cchhhhhh
Q 024811 231 YDVIWVQW 238 (262)
Q Consensus 231 yDlI~s~~ 238 (262)
+|+++.+-
T Consensus 73 ~d~lv~~A 80 (230)
T 3guy_A 73 PSTVVHSA 80 (230)
T ss_dssp CSEEEECC
T ss_pred CCEEEEeC
Confidence 57777654
No 479
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=22.41 E-value=2.5e+02 Score=22.88 Aligned_cols=71 Identities=24% Similarity=0.216 Sum_probs=42.9
Q ss_pred eeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC---------
Q 024811 160 VALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--------- 227 (262)
Q Consensus 160 ~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~--------- 227 (262)
++|=.|+ |+|+ +++.|+ +.+.+|.+++-++.-++...+.+... ..++.++.+|+.+...-
T Consensus 4 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLV-KDGFAVAIADYNDATAKAVASEINQA-------GGHAVAVKVDVSDRDQVFAAVEQARK 75 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4555664 3443 444455 55778999999887766655544321 23567888888764210
Q ss_pred -CCccchhhhhh
Q 024811 228 -TGRYDVIWVQW 238 (262)
Q Consensus 228 -~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 76 ~~g~id~lv~nA 87 (256)
T 1geg_A 76 TLGGFDVIVNNA 87 (256)
T ss_dssp HTTCCCEEEECC
T ss_pred HhCCCCEEEECC
Confidence 13678888764
No 480
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=22.38 E-value=1.4e+02 Score=25.27 Aligned_cols=81 Identities=17% Similarity=0.177 Sum_probs=48.4
Q ss_pred eeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC---------
Q 024811 160 VALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--------- 227 (262)
Q Consensus 160 ~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~--------- 227 (262)
+||=-|+ |+|+ +++.|+ +.+.+|.++|.+++-++...+. ..++.++.+|+.+...-
T Consensus 4 ~vlVTGas~GIG~aia~~la-~~Ga~V~~~~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~v~~~~~ 71 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFL-EAGDKVCFIDIDEKRSADFAKE-----------RPNLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHTT-----------CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHh-----------cCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 3444454 5555 455556 6688999999998776654443 23567888888764210
Q ss_pred -CCccchhhhhh------HHhhcCchhHHHHH
Q 024811 228 -TGRYDVIWVQW------CIGHLTDDDFVSFF 252 (262)
Q Consensus 228 -~~~yDlI~s~~------vl~hltD~el~~~l 252 (262)
-++.|++|.+- .+.-++.+++.+.+
T Consensus 72 ~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~ 103 (247)
T 3ged_A 72 KLQRIDVLVNNACRGSKGILSSLLYEEFDYIL 103 (247)
T ss_dssp HHSCCCEEEECCCCCCCCGGGTCCHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHH
Confidence 15678777653 24445555544433
No 481
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=22.25 E-value=99 Score=28.64 Aligned_cols=42 Identities=12% Similarity=-0.015 Sum_probs=34.2
Q ss_pred CCceeeEeecc-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHh
Q 024811 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (262)
Q Consensus 157 ~~~~VLDlGcG-tG~lt~~La~~~~~~V~~VD~s~~mld~Ar~ 198 (262)
++.+|+=+|+| .|..+..++...+.+|.++|.++.-++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 46799999998 4666667776678899999999988888876
No 482
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=22.23 E-value=96 Score=28.81 Aligned_cols=41 Identities=27% Similarity=0.152 Sum_probs=31.3
Q ss_pred CceeeEeeccc-c-HHHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 158 HLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 158 ~~~VLDlGcGt-G-~lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
..+|.=||+|. | .++..|+ ..+.+|.++|.+++.++.+++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la-~~G~~V~l~D~~~~~~~~~~~~ 79 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKI 79 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHH
Confidence 34688899986 3 3566666 6677899999999999887664
No 483
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=22.19 E-value=2.1e+02 Score=24.02 Aligned_cols=79 Identities=13% Similarity=0.077 Sum_probs=45.4
Q ss_pred eeeEeec-cc-cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCCCCccchhhh
Q 024811 160 VALDCGS-GI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (262)
Q Consensus 160 ~VLDlGc-Gt-G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~~~~yDlI~s 236 (262)
+|.=||+ |. |. ++..|+ ..+.+|.++|.+++-++.+.+. . +.+ .+..+. ....|+|+.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~-~~g~~V~~~~r~~~~~~~~~~~-g------------~~~--~~~~~~---~~~aDvVi~ 73 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIH-DSAHHLAAIEIAPEGRDRLQGM-G------------IPL--TDGDGW---IDEADVVVL 73 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HSSSEEEEECCSHHHHHHHHHT-T------------CCC--CCSSGG---GGTCSEEEE
T ss_pred EEEEECCCCHHHHHHHHHHH-hCCCEEEEEECCHHHHHHHHhc-C------------CCc--CCHHHH---hcCCCEEEE
Confidence 6777887 62 33 444454 4566899999998887766551 0 111 122211 135788776
Q ss_pred hhHHhhcCchhHHHHHHHHHhhccCC
Q 024811 237 QWCIGHLTDDDFVSFFKRAKVNHSQT 262 (262)
Q Consensus 237 ~~vl~hltD~el~~~l~~~~~~LkPG 262 (262)
.-. +..+.++++.+...|+||
T Consensus 74 av~-----~~~~~~v~~~l~~~l~~~ 94 (286)
T 3c24_A 74 ALP-----DNIIEKVAEDIVPRVRPG 94 (286)
T ss_dssp CSC-----HHHHHHHHHHHGGGSCTT
T ss_pred cCC-----chHHHHHHHHHHHhCCCC
Confidence 532 223446777777777664
No 484
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=22.19 E-value=2.5e+02 Score=22.96 Aligned_cols=77 Identities=17% Similarity=0.168 Sum_probs=48.2
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++. |. +++.|+ +.+.+|.+++-++.-++...+.+..... ....+.++.+|+.+...-
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLA-TDGYRVVLIARSKQNLEKVHDEIMRSNK----HVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-HHTCEEEEEESCHHHHHHHHHHHHHHCT----TSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhcc----ccCcceEEeccCCCHHHHHHHHHHH
Confidence 45677777644 43 455555 5577899999999888877766543210 113567888888874210
Q ss_pred ---CCccchhhhhhH
Q 024811 228 ---TGRYDVIWVQWC 239 (262)
Q Consensus 228 ---~~~yDlI~s~~v 239 (262)
-++.|+++.+-.
T Consensus 82 ~~~~g~iD~lvnnAg 96 (250)
T 3nyw_A 82 HQKYGAVDILVNAAA 96 (250)
T ss_dssp HHHHCCEEEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 136788776643
No 485
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=22.14 E-value=2.3e+02 Score=24.01 Aligned_cols=72 Identities=14% Similarity=-0.046 Sum_probs=46.5
Q ss_pred CceeeEeecc----ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-----
Q 024811 158 HLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----- 227 (262)
Q Consensus 158 ~~~VLDlGcG----tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~----- 227 (262)
+.+||=.|++ +|+ +++.|+ +.+.+|.+++-++...+.+++.... ...+.++.+|+.+...-
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAR-EAGAELAFTYQGDALKKRVEPLAEE--------LGAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHH-HTTCEEEEEECSHHHHHHHHHHHHH--------HTCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHh--------cCCceEEECCCCCHHHHHHHHH
Confidence 5578888854 665 556666 6678899999887655555443322 12467888898874210
Q ss_pred -----CCccchhhhhh
Q 024811 228 -----TGRYDVIWVQW 238 (262)
Q Consensus 228 -----~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 102 ~~~~~~g~iD~lVnnA 117 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAI 117 (293)
T ss_dssp HHHHHTSCCSEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 14678888664
No 486
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=22.12 E-value=1.3e+02 Score=25.81 Aligned_cols=40 Identities=13% Similarity=-0.098 Sum_probs=27.0
Q ss_pred ceeeEeeccc-cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhh
Q 024811 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARES 199 (262)
Q Consensus 159 ~~VLDlGcGt-G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~ 199 (262)
.+|.=||+|. |. ++..|+ +.+.+|.+.|.+++-++.+.+.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~-~~G~~V~~~dr~~~~~~~~~~~ 49 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCL-RAGLSTWGADLNPQACANLLAE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHH-HCCCeEEEEECCHHHHHHHHHc
Confidence 4677777663 22 344444 4567899999999888776653
No 487
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=22.10 E-value=1.4e+02 Score=26.02 Aligned_cols=31 Identities=13% Similarity=-0.206 Sum_probs=21.5
Q ss_pred ceeeEeec-cccH--HHHHHHHhcCCcEEEEeCCH
Q 024811 159 LVALDCGS-GIGR--ITKNLLIRYFNEVDLLEPVS 190 (262)
Q Consensus 159 ~~VLDlGc-GtG~--lt~~La~~~~~~V~~VD~s~ 190 (262)
.+|.=+|- |+|. ++..|. +.+.+|.+.|..+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~-~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAK-EAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHH-HTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHH-hCCCEEEEEcCCC
Confidence 46777774 6666 344444 7889999999864
No 488
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=22.05 E-value=2.9e+02 Score=22.93 Aligned_cols=73 Identities=18% Similarity=0.096 Sum_probs=45.8
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeC-------------CHHHHHHHHhhcccccccCCCCCcceEEEEcCC
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEP-------------VSHFLDAARESLAPENHMAPDMHKATNFFCVPL 221 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~-------------s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~ 221 (262)
+.++|=.|++. |. +++.|+ +.+.+|.+++. +++-++...+.+.. ...++.++.+|+
T Consensus 15 gk~~lVTGas~gIG~a~a~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv 86 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLA-AEGADIIACDICAPVSASVTYAPASPEDLDETARLVED-------QGRKALTRVLDV 86 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT-------TTCCEEEEECCT
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh-------cCCeEEEEEcCC
Confidence 45677777644 43 455555 56788999987 66666666555432 134677888888
Q ss_pred CCCCCC----------CCccchhhhhh
Q 024811 222 QDFTPE----------TGRYDVIWVQW 238 (262)
Q Consensus 222 ~~~~~~----------~~~yDlI~s~~ 238 (262)
.+...- -++.|++|.+-
T Consensus 87 ~~~~~v~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 87 RDDAALRELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 764210 13678877664
No 489
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=21.95 E-value=1.7e+02 Score=24.76 Aligned_cols=72 Identities=14% Similarity=-0.007 Sum_probs=47.0
Q ss_pred CceeeEeec----cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-----
Q 024811 158 HLVALDCGS----GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----- 227 (262)
Q Consensus 158 ~~~VLDlGc----GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~----- 227 (262)
+.+||=.|+ |+|+ +++.|+ +.+.+|.+++-++...+.+.+..... ..+.++.+|+.+...-
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVC-AQGAEVALTYLSETFKKRVDPLAESL--------GVKLTVPCDVSDAESVDNMFK 100 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHHH--------TCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhc--------CCeEEEEcCCCCHHHHHHHHH
Confidence 457888886 6775 666666 66788999998876655555443221 2357888898874210
Q ss_pred -----CCccchhhhhh
Q 024811 228 -----TGRYDVIWVQW 238 (262)
Q Consensus 228 -----~~~yDlI~s~~ 238 (262)
-++.|++|.+-
T Consensus 101 ~~~~~~g~iD~lVnnA 116 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAV 116 (296)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 03678888764
No 490
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=21.93 E-value=1.5e+02 Score=24.91 Aligned_cols=70 Identities=19% Similarity=0.152 Sum_probs=44.4
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC------CC
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ET 228 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~------~~ 228 (262)
+.+||=.|++ +|. +++.|+ +.+.+|.+++-++.-++.+.+.+. .++.++.+|+.+... .-
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dl~d~~~v~~~~~~~ 84 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELA-RRGATVIMAVRDTRKGEAAARTMA----------GQVEVRELDLQDLSSVRRFADGV 84 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHTTSS----------SEEEEEECCTTCHHHHHHHHHTC
T ss_pred CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhc----------CCeeEEEcCCCCHHHHHHHHHhc
Confidence 4567767754 444 344444 557789999999887776665541 367788888876421 01
Q ss_pred Cccchhhhhh
Q 024811 229 GRYDVIWVQW 238 (262)
Q Consensus 229 ~~yDlI~s~~ 238 (262)
++.|+++.+-
T Consensus 85 ~~iD~lv~nA 94 (291)
T 3rd5_A 85 SGADVLINNA 94 (291)
T ss_dssp CCEEEEEECC
T ss_pred CCCCEEEECC
Confidence 3568777664
No 491
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=21.88 E-value=1.8e+02 Score=23.76 Aligned_cols=70 Identities=23% Similarity=0.172 Sum_probs=44.8
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|+ +++.|+ +.+.+|.+++.++..++...+.+. ..+.++.+|+.+...-
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~ 74 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLA-ADGATVIVSDINAEGAKAAAASIG----------KKARAIAADISDPGSVKALFAEI 74 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHC----------TTEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhC----------CceEEEEcCCCCHHHHHHHHHHH
Confidence 4567777764 444 455555 567889999999887776665542 2567777888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 75 ~~~~g~id~lv~nA 88 (247)
T 3rwb_A 75 QALTGGIDILVNNA 88 (247)
T ss_dssp HHHHSCCSEEEECC
T ss_pred HHHCCCCCEEEECC
Confidence 03678777654
No 492
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=21.87 E-value=1.6e+02 Score=23.95 Aligned_cols=69 Identities=17% Similarity=0.141 Sum_probs=44.5
Q ss_pred ceeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC--------
Q 024811 159 LVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-------- 227 (262)
Q Consensus 159 ~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~-------- 227 (262)
.+||=.|+ |+|+ +++.|+ +.+.+|.+++-++.-++...+.+. ..+.++.+|+.+...-
T Consensus 4 k~vlVTGas~GIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~ 72 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLV-ERGHQVSMMGRRYQRLQQQELLLG----------NAVIGIVADLAHHEDVDVAFAAAV 72 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHG----------GGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhc----------CCceEEECCCCCHHHHHHHHHHHH
Confidence 35666675 4444 445555 567889999999888777666552 1477888888764210
Q ss_pred --CCccchhhhhh
Q 024811 228 --TGRYDVIWVQW 238 (262)
Q Consensus 228 --~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 73 ~~~g~id~lvnnA 85 (235)
T 3l6e_A 73 EWGGLPELVLHCA 85 (235)
T ss_dssp HHHCSCSEEEEEC
T ss_pred HhcCCCcEEEECC
Confidence 13578877653
No 493
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=21.60 E-value=2.8e+02 Score=22.65 Aligned_cols=70 Identities=14% Similarity=0.069 Sum_probs=42.6
Q ss_pred CceeeEeec--cccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGS--GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGc--GtG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|+ |+|+ +++.|+ +.+.+|.+++-++.-++...+.+. ..+.++.+|+.+...-
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~ 73 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAV-AAGARVVLADVLDEEGAATARELG----------DAARYQHLDVTIEEDWQRVVAYA 73 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTTG----------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhC----------CceeEEEecCCCHHHHHHHHHHH
Confidence 446777775 4444 444455 557789999988876665544331 2467778888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 74 ~~~~g~iD~lv~nA 87 (254)
T 1hdc_A 74 REEFGSVDGLVNNA 87 (254)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 02678877654
No 494
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=21.58 E-value=2.6e+02 Score=22.75 Aligned_cols=73 Identities=19% Similarity=0.108 Sum_probs=43.5
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ +|+ +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 85 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLA-QDGAHVVVSSRKQENVDRTVATLQGE-------GLSVTGTVCHVGKAEDRERLVAMA 85 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCceEEEEccCCCHHHHHHHHHHH
Confidence 4467777753 333 344445 55778999999887766555544321 23567788888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-+..|+++.+-
T Consensus 86 ~~~~g~iD~lv~~A 99 (260)
T 2zat_A 86 VNLHGGVDILVSNA 99 (260)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 03678777653
No 495
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=21.53 E-value=80 Score=31.41 Aligned_cols=32 Identities=25% Similarity=0.444 Sum_probs=22.8
Q ss_pred CceeeEeecc-ccH-HHHHHHHhcCCcEEEEeCC
Q 024811 158 HLVALDCGSG-IGR-ITKNLLIRYFNEVDLLEPV 189 (262)
Q Consensus 158 ~~~VLDlGcG-tG~-lt~~La~~~~~~V~~VD~s 189 (262)
..+||=+||| .|. +++.|+.....+++++|..
T Consensus 411 ~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d 444 (805)
T 2nvu_B 411 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD 444 (805)
T ss_dssp TCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCC
Confidence 4589999985 554 5566663446789999875
No 496
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=21.51 E-value=2.5e+02 Score=23.72 Aligned_cols=73 Identities=14% Similarity=0.109 Sum_probs=44.2
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.+||=.|++ +|. +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 105 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYA-KAGATIVFNDINQELVDRGMAAYKAA-------GINAHGYVCDVTDEDGIQAMVAQI 105 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHT-------TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCeEEEEEecCCCHHHHHHHHHHH
Confidence 4567777754 333 344444 45778999999887776655544321 23567888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-+..|++|.+-
T Consensus 106 ~~~~g~iD~lvnnA 119 (291)
T 3cxt_A 106 ESEVGIIDILVNNA 119 (291)
T ss_dssp HHHTCCCCEEEECC
T ss_pred HHHcCCCcEEEECC
Confidence 13578887664
No 497
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=21.45 E-value=1.5e+02 Score=27.57 Aligned_cols=67 Identities=24% Similarity=0.215 Sum_probs=45.1
Q ss_pred CceeeEeeccccHHHHHHHHh--cCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCC----CCCcc
Q 024811 158 HLVALDCGSGIGRITKNLLIR--YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRY 231 (262)
Q Consensus 158 ~~~VLDlGcGtG~lt~~La~~--~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~----~~~~y 231 (262)
..+|+=+|+ |+++..|++. ...+|.++|.+++-.+.+.+.+. +..++++|..+... .-..+
T Consensus 235 ~~~v~I~Gg--G~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~-----------~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 235 YRRIMIVGG--GNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELE-----------NTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCT-----------TSEEEESCTTCHHHHHHTTGGGC
T ss_pred ccEEEEEcc--hHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCC-----------CceEEeccccchhhHhhcCchhh
Confidence 457766654 4555555533 24579999999999888887763 56788999887421 12467
Q ss_pred chhhhh
Q 024811 232 DVIWVQ 237 (262)
Q Consensus 232 DlI~s~ 237 (262)
|++++.
T Consensus 302 D~~ia~ 307 (461)
T 4g65_A 302 DVFIAL 307 (461)
T ss_dssp SEEEEC
T ss_pred cEEEEc
Confidence 777663
No 498
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=21.31 E-value=2.5e+02 Score=22.60 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=37.5
Q ss_pred CceeeEeeccc--cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCC
Q 024811 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL 221 (262)
Q Consensus 158 ~~~VLDlGcGt--G~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~ 221 (262)
+.+||=.|++. |. +++.|+ +.+.+|.+++-++.-++...+.+... ......++..|+
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~d~ 73 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYA-AHGASVVLLGRTEASLAEVSDQIKSA------GQPQPLIIALNL 73 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT------TSCCCEEEECCT
T ss_pred CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEecCHHHHHHHHHHHHhc------CCCCceEEEecc
Confidence 45778778643 33 445555 55778999999998888777766432 123456777766
No 499
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=20.96 E-value=2.7e+02 Score=22.37 Aligned_cols=73 Identities=27% Similarity=0.285 Sum_probs=43.1
Q ss_pred CceeeEeecc--ccH-HHHHHHHh-cCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~-~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------ 227 (262)
+.+||=.|+. +|. +++.|+ + .+.+|.+++-++.-++...+.+... ..++.++.+|+.+...-
T Consensus 4 ~k~vlITGasggIG~~~a~~L~-~~~g~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLC-RLFSGDVVLTARDVTRGQAAVQQLQAE-------GLSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHH-HHSSSEEEEEESSHHHHHHHHHHHHHT-------TCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HhcCCeEEEEeCChHHHHHHHHHHHhc-------CCeeEEEECCCCCHHHHHHHHHH
Confidence 3467766643 332 334444 4 5678999998877666655554321 23577888888764210
Q ss_pred ----CCccchhhhhh
Q 024811 228 ----TGRYDVIWVQW 238 (262)
Q Consensus 228 ----~~~yDlI~s~~ 238 (262)
-+..|+||.+-
T Consensus 76 ~~~~~g~id~li~~A 90 (276)
T 1wma_A 76 LRKEYGGLDVLVNNA 90 (276)
T ss_dssp HHHHHSSEEEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 02678877653
No 500
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=20.89 E-value=1.3e+02 Score=25.16 Aligned_cols=73 Identities=11% Similarity=0.022 Sum_probs=47.1
Q ss_pred CceeeEeecc--ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHhhcccccccCCCCCcceEEEEcCCCCCCCC-------
Q 024811 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (262)
Q Consensus 158 ~~~VLDlGcG--tG~-lt~~La~~~~~~V~~VD~s~~mld~Ar~~l~~a~~~~~~~~~~v~f~~~d~~~~~~~------- 227 (262)
+.++|=.|++ +|+ +++.|+ +.+.+|.+++-++.-++...+.+... ...+.++.+|+.+...-
T Consensus 26 gk~~lVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLA-VAGARILINGTDPSRVAQTVQEFRNV-------GHDAEAVAFDVTSESEIIEAFARL 97 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHHHT-------TCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhc-------CCceEEEEcCCCCHHHHHHHHHHH
Confidence 4567777754 443 455555 55778999999988887776665431 23577888888764210
Q ss_pred ---CCccchhhhhh
Q 024811 228 ---TGRYDVIWVQW 238 (262)
Q Consensus 228 ---~~~yDlI~s~~ 238 (262)
-++.|+++.+-
T Consensus 98 ~~~~g~iD~lv~nA 111 (271)
T 4ibo_A 98 DEQGIDVDILVNNA 111 (271)
T ss_dssp HHHTCCCCEEEECC
T ss_pred HHHCCCCCEEEECC
Confidence 13678887664
Done!