Query         024828
Match_columns 262
No_of_seqs    170 out of 1405
Neff          10.5
Searched_HMMs 29240
Date          Mon Mar 25 15:06:07 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024828.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024828hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4fih_A Serine/threonine-protei 100.0 1.2E-56 4.2E-61  368.3  20.0  219   10-237   113-332 (346)
  2 3fpq_A Serine/threonine-protei 100.0 4.7E-56 1.6E-60  358.0  22.5  218    7-234    64-288 (290)
  3 4b9d_A Serine/threonine-protei 100.0   1E-56 3.5E-61  369.4  18.3  222    7-237    62-285 (350)
  4 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.1E-56 7.1E-61  361.9  18.7  221   10-240    74-302 (311)
  5 3ubd_A Ribosomal protein S6 ki 100.0 1.4E-56 4.8E-61  362.8  14.4  216   12-237    70-290 (304)
  6 4fie_A Serine/threonine-protei 100.0   9E-55 3.1E-59  365.6  24.1  219   10-237   190-409 (423)
  7 3hyh_A Carbon catabolite-derep 100.0 4.1E-55 1.4E-59  349.7  20.3  215    8-234    53-268 (275)
  8 4g3f_A NF-kappa-beta-inducing  100.0 1.3E-53 4.5E-58  349.4  20.6  217   16-240    98-334 (336)
  9 4asz_A BDNF/NT-3 growth factor 100.0 3.7E-52 1.3E-56  337.4  15.2  218    8-236    55-288 (299)
 10 3omv_A RAF proto-oncogene seri 100.0 3.7E-51 1.3E-55  331.8  20.6  216    6-229    70-294 (307)
 11 4aoj_A High affinity nerve gro 100.0 4.6E-51 1.6E-55  335.3  20.1  213    8-229    83-313 (329)
 12 4g31_A Eukaryotic translation  100.0 5.7E-51   2E-55  330.9  18.7  220    7-237    42-288 (299)
 13 4b99_A Mitogen-activated prote 100.0 1.8E-50 6.1E-55  339.7  21.6  228    8-237    93-353 (398)
 14 4f9c_A Cell division cycle 7-r 100.0   1E-50 3.4E-55  337.7  19.3  229    3-235    54-359 (361)
 15 4gt4_A Tyrosine-protein kinase 100.0 1.1E-50 3.6E-55  330.2  18.0  213    8-229    69-300 (308)
 16 3v5w_A G-protein coupled recep 100.0 8.5E-49 2.9E-53  343.6  22.6  217   14-239   238-460 (689)
 17 4ase_A Vascular endothelial gr 100.0 4.3E-49 1.5E-53  326.0  15.3  214    8-229   107-341 (353)
 18 3uto_A Twitchin; kinase, muscl 100.0 2.8E-48 9.7E-53  340.7  20.9  221    8-237   194-419 (573)
 19 3fe3_A MAP/microtubule affinit 100.0 1.3E-46 4.6E-51  310.2  22.5  219    8-237    54-273 (328)
 20 3fxz_A Serine/threonine-protei 100.0   4E-46 1.4E-50  303.6  24.1  222   10-239    59-280 (297)
 21 3soa_A Calcium/calmodulin-depe 100.0 4.6E-46 1.6E-50  318.1  23.7  221    7-235    49-274 (444)
 22 1o6l_A RAC-beta serine/threoni 100.0 7.3E-46 2.5E-50  306.7  23.2  217   10-236    47-268 (337)
 23 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.7E-46 9.2E-51  311.2  18.6  218    9-236    64-288 (353)
 24 2yab_A Death-associated protei 100.0 1.7E-45 5.8E-50  307.1  22.9  217   11-236    58-280 (361)
 25 3kn6_A Ribosomal protein S6 ki 100.0 2.7E-46 9.4E-51  308.2  17.8  226   11-237    48-279 (325)
 26 4dc2_A Protein kinase C IOTA t 100.0 2.8E-46 9.5E-51  314.8  17.9  226    8-236    92-326 (396)
 27 3zgw_A Maternal embryonic leuc 100.0 6.6E-46 2.3E-50  307.9  19.8  217   10-236    50-268 (347)
 28 3hmm_A TGF-beta receptor type- 100.0 5.9E-46   2E-50  302.6  18.6  225    3-229    32-291 (303)
 29 3a8x_A Protein kinase C IOTA t 100.0 1.2E-45   4E-50  306.6  20.2  226    8-236    49-283 (345)
 30 3uc3_A Serine/threonine-protei 100.0 6.1E-46 2.1E-50  310.3  18.5  224    8-236    56-282 (361)
 31 3niz_A Rhodanese family protei 100.0 7.9E-46 2.7E-50  303.7  18.5  222    9-236    60-308 (311)
 32 1xjd_A Protein kinase C, theta 100.0 1.5E-45 5.1E-50  305.7  19.8  216   11-236    60-277 (345)
 33 3o0g_A Cell division protein k 100.0 5.4E-45 1.9E-49  296.2  22.7  225    8-236    41-290 (292)
 34 1tki_A Titin; serine kinase, m 100.0 9.4E-46 3.2E-50  304.5  17.2  223    5-236    38-265 (321)
 35 2bdw_A Hypothetical protein K1 100.0   4E-45 1.4E-49  305.4  21.2  219    8-235    68-291 (362)
 36 3a62_A Ribosomal protein S6 ki 100.0 2.6E-45 8.9E-50  302.7  19.9  218    9-236    62-284 (327)
 37 2i0e_A Protein kinase C-beta I 100.0 4.5E-45 1.5E-49  303.7  21.0  217   10-236    62-284 (353)
 38 2w4o_A Calcium/calmodulin-depe 100.0 2.5E-45 8.4E-50  305.3  19.0  234    2-243    82-320 (349)
 39 3gni_B Strad alpha; kinase fol 100.0 1.1E-44 3.8E-49  305.7  23.2  231    8-239    66-344 (389)
 40 1fot_A TPK1 delta, CAMP-depend 100.0 9.8E-45 3.3E-49  297.9  22.2  213   11-236    49-266 (318)
 41 2c30_A Serine/threonine-protei 100.0 2.8E-44 9.7E-49  295.8  24.8  221   10-239    84-305 (321)
 42 3c0i_A Peripheral plasma membr 100.0 2.5E-45 8.6E-50  305.6  18.7  217   11-236    69-294 (351)
 43 2zv2_A Calcium/calmodulin-depe 100.0 2.3E-45 7.9E-50  299.2  18.1  215   11-234    79-298 (298)
 44 2y0a_A Death-associated protei 100.0 1.1E-44 3.9E-49  298.7  21.9  217   11-236    57-279 (326)
 45 3eqc_A Dual specificity mitoge 100.0 3.4E-45 1.2E-49  305.8  18.9  237    8-246    71-342 (360)
 46 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.7E-44 5.8E-49  300.1  22.7  214   11-237    84-302 (350)
 47 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.3E-45 2.2E-49  300.9  19.8  212   12-235    53-265 (336)
 48 2pmi_A Negative RE, cyclin-dep 100.0 1.5E-44 5.2E-49  296.9  21.6  224   10-238    45-303 (317)
 49 1ob3_A PFPK5, cell division co 100.0 6.2E-45 2.1E-49  295.3  18.9  221   10-235    42-287 (288)
 50 3tki_A Serine/threonine-protei 100.0 2.5E-45 8.5E-50  302.3  16.8  222    9-237    46-270 (323)
 51 2x4f_A Myosin light chain kina 100.0 2.3E-45 7.9E-50  307.9  16.8  240    9-257   127-371 (373)
 52 4agu_A Cyclin-dependent kinase 100.0 9.6E-45 3.3E-49  297.2  19.5  232    7-239    41-295 (311)
 53 4ejn_A RAC-alpha serine/threon 100.0 7.8E-45 2.7E-49  311.8  19.7  220    9-237   189-413 (446)
 54 3gbz_A Kinase, CMGC CDK; ssgci 100.0 9.2E-45 3.1E-49  299.7  19.4  225    8-237    73-327 (329)
 55 1t4h_A Serine/threonine-protei 100.0 4.6E-44 1.6E-48  290.4  23.0  217    8-234    65-288 (290)
 56 4fr4_A YANK1, serine/threonine 100.0 4.9E-44 1.7E-48  300.1  23.8  220   11-238    58-281 (384)
 57 3kk8_A Calcium/calmodulin depe 100.0 6.8E-44 2.3E-48  288.5  23.5  224    8-240    45-273 (284)
 58 3v8s_A RHO-associated protein  100.0 2.1E-44 7.2E-49  304.8  21.0  216   14-238   115-339 (410)
 59 2rku_A Serine/threonine-protei 100.0 1.6E-43 5.6E-48  287.7  24.2  220    8-237    55-274 (294)
 60 2r5t_A Serine/threonine-protei 100.0 2.7E-44 9.2E-49  301.0  20.1  218    9-236    79-301 (373)
 61 4aw2_A Serine/threonine-protei 100.0 2.1E-44 7.3E-49  307.0  19.7  222   14-240   120-350 (437)
 62 3com_A Serine/threonine-protei 100.0 4.5E-44 1.5E-48  293.6  20.9  225    9-241    65-291 (314)
 63 3fdn_A Serine/threonine-protei 100.0 4.3E-44 1.5E-48  289.0  20.5  217   12-240    53-269 (279)
 64 3cok_A Serine/threonine-protei 100.0   6E-44 2.1E-48  288.0  20.9  216   12-237    55-271 (278)
 65 2owb_A Serine/threonine-protei 100.0   2E-43   7E-48  292.3  24.2  219    8-236    81-299 (335)
 66 3mtl_A Cell division protein k 100.0 3.3E-45 1.1E-49  301.8  13.1  220   14-239    46-292 (324)
 67 2y94_A 5'-AMP-activated protei 100.0 4.9E-44 1.7E-48  307.7  20.7  214   11-235    59-273 (476)
 68 2qr7_A Ribosomal protein S6 ki 100.0 2.2E-44 7.4E-49  298.7  17.7  218   14-236    61-285 (342)
 69 2vd5_A DMPK protein; serine/th 100.0 5.6E-44 1.9E-48  302.4  20.4  222   12-239   105-338 (412)
 70 2eue_A Carbon catabolite derep 100.0 5.5E-44 1.9E-48  287.8  19.2  216    8-235    53-269 (275)
 71 2yex_A Serine/threonine-protei 100.0 7.4E-44 2.5E-48  287.0  19.8  224    9-239    46-272 (276)
 72 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-43 3.7E-48  286.3  20.8  218   10-237    48-270 (277)
 73 2a2a_A Death-associated protei 100.0 1.2E-43 4.2E-48  292.0  21.2  218   11-237    58-281 (321)
 74 1kob_A Twitchin; kinase, intra 100.0 1.6E-43 5.3E-48  297.8  22.1  220    9-237    89-313 (387)
 75 3is5_A Calcium-dependent prote 100.0 2.9E-43 9.8E-48  285.1  21.7  214   11-234    63-284 (285)
 76 4aaa_A Cyclin-dependent kinase 100.0 1.6E-44 5.6E-49  298.4  14.4  229    7-236    63-314 (331)
 77 2vgo_A Serine/threonine-protei 100.0 3.9E-43 1.3E-47  284.1  22.0  214   12-237    58-271 (284)
 78 1u5q_A Serine/threonine protei 100.0 2.5E-43 8.7E-48  293.0  21.5  218    8-238    94-315 (348)
 79 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.4E-43 1.5E-47  305.2  23.5  220   12-237   229-457 (543)
 80 3lij_A Calcium/calmodulin depe 100.0 1.5E-43 5.2E-48  307.4  20.6  218    9-236    77-299 (494)
 81 2r3i_A Cell division protein k 100.0 5.4E-43 1.9E-47  285.2  22.6  223   12-239    46-294 (299)
 82 3oz6_A Mitogen-activated prote 100.0 3.9E-44 1.3E-48  302.3  16.3  229    8-239    48-339 (388)
 83 2ac3_A MAP kinase-interacting  100.0 1.3E-43 4.5E-48  291.0  18.9  228   10-238    52-305 (316)
 84 3a7i_A MST3 kinase, serine/thr 100.0 3.4E-43 1.2E-47  287.0  21.0  220   10-239    62-281 (303)
 85 3p86_A Serine/threonine-protei 100.0 2.2E-43 7.4E-48  288.9  19.7  219    8-234    74-299 (309)
 86 3pfq_A PKC-B, PKC-beta, protei 100.0   2E-43 6.7E-48  316.0  21.1  217   10-236   383-605 (674)
 87 2acx_A G protein-coupled recep 100.0 2.6E-43 9.1E-48  307.5  21.2  220   11-237   227-453 (576)
 88 3mwu_A Calmodulin-domain prote 100.0 1.2E-43 4.2E-48  307.4  19.0  219   11-239    64-287 (486)
 89 3qd2_B Eukaryotic translation  100.0 1.3E-43 4.5E-48  292.6  18.4  217    8-235    44-332 (332)
 90 2x7f_A TRAF2 and NCK-interacti 100.0 7.8E-44 2.7E-48  293.6  16.9  224    8-239    60-297 (326)
 91 3hko_A Calcium/calmodulin-depe 100.0 7.8E-44 2.7E-48  295.8  16.9  224    9-240    69-342 (345)
 92 2jam_A Calcium/calmodulin-depe 100.0 6.1E-43 2.1E-47  285.7  21.3  219   10-238    48-271 (304)
 93 3g33_A Cell division protein k 100.0 2.8E-43 9.6E-48  288.2  19.1  218   13-236    56-304 (308)
 94 3q5i_A Protein kinase; CDPK, m 100.0 5.2E-43 1.8E-47  304.7  21.8  218   11-238    89-311 (504)
 95 2y7j_A Phosphorylase B kinase  100.0 6.5E-43 2.2E-47  292.4  21.3  217    9-234   140-365 (365)
 96 3bhy_A Death-associated protei 100.0 3.4E-43 1.2E-47  284.2  18.9  220   11-239    51-276 (283)
 97 3dls_A PAS domain-containing s 100.0   9E-43 3.1E-47  288.3  21.8  209   11-236    72-282 (335)
 98 3nyv_A Calmodulin-domain prote 100.0 1.7E-43 5.8E-48  306.4  18.0  220    9-238    67-291 (484)
 99 1phk_A Phosphorylase kinase; g 100.0 1.4E-42 4.9E-47  282.6  22.3  222    9-239    64-294 (298)
100 3llt_A Serine/threonine kinase 100.0 2.8E-43 9.5E-48  294.2  18.5  221    4-233    67-360 (360)
101 1cm8_A Phosphorylated MAP kina 100.0 1.7E-43 5.8E-48  296.1  17.3  226    7-238    63-317 (367)
102 2h6d_A 5'-AMP-activated protei 100.0 7.8E-43 2.7E-47  281.1  20.5  215   11-236    54-269 (276)
103 3dbq_A Dual specificity protei 100.0 3.8E-43 1.3E-47  291.6  19.0  222    7-237    46-282 (343)
104 3ttj_A Mitogen-activated prote 100.0 1.9E-43 6.5E-48  304.0  17.6  225    8-237   101-364 (464)
105 1nxk_A MAP kinase-activated pr 100.0 6.2E-43 2.1E-47  295.7  20.4  221   13-236    99-329 (400)
106 3n9x_A Phosphotransferase; mal 100.0 1.1E-42 3.6E-47  297.3  22.0  231    7-239    64-372 (432)
107 2clq_A Mitogen-activated prote 100.0 4.1E-43 1.4E-47  285.3  18.5  227    9-242    60-292 (295)
108 3fme_A Dual specificity mitoge 100.0 3.5E-43 1.2E-47  285.0  17.8  232    8-248    46-286 (290)
109 1x8b_A WEE1HU, WEE1-like prote 100.0 1.8E-42 6.2E-47  280.3  21.9  212    8-235    50-286 (289)
110 3lm5_A Serine/threonine-protei 100.0 3.2E-43 1.1E-47  290.2  17.8  225    9-240    69-299 (327)
111 1ua2_A CAK, cell division prot 100.0 1.9E-43 6.3E-48  293.8  16.1  221   12-237    56-300 (346)
112 3rp9_A Mitogen-activated prote 100.0 3.3E-43 1.1E-47  302.7  18.0  230    8-239    92-407 (458)
113 3mi9_A Cell division protein k 100.0 1.3E-42 4.6E-47  289.1  20.6  224   11-240    59-323 (351)
114 2j7t_A Serine/threonine-protei 100.0 6.1E-43 2.1E-47  285.3  18.0  223    9-239    57-286 (302)
115 2zmd_A Dual specificity protei 100.0 1.1E-42 3.8E-47  293.4  20.1  222    7-237    93-329 (390)
116 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-42 3.8E-47  285.1  19.5  213    8-234    96-310 (311)
117 2pml_X PFPK7, Ser/Thr protein  100.0 6.9E-43 2.4E-47  290.4  18.0  219   13-239    88-333 (348)
118 2w5a_A Serine/threonine-protei 100.0 4.2E-43 1.5E-47  283.1  15.6  220    8-236    45-275 (279)
119 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-42 3.6E-47  290.1  17.9  222   11-238   101-331 (355)
120 4eqm_A Protein kinase; transfe 100.0 2.9E-42   1E-46  280.4  19.9  225    7-239    50-278 (294)
121 3lb7_A RAF proto-oncogene seri 100.0   4E-42 1.4E-46  281.2  20.6  222    6-232    70-297 (307)
122 2vwi_A Serine/threonine-protei 100.0 1.1E-42 3.8E-47  283.7  17.0  222    9-238    54-297 (303)
123 3qyz_A Mitogen-activated prote 100.0 9.3E-42 3.2E-46  285.4  22.7  227    8-237    65-322 (364)
124 3rgf_A Cyclin-dependent kinase 100.0 1.1E-42 3.8E-47  295.0  17.2  225   11-237    61-342 (405)
125 3i6u_A CDS1, serine/threonine- 100.0 8.4E-43 2.9E-47  296.7  16.3  217   11-236   183-407 (419)
126 2wei_A Calmodulin-domain prote 100.0 2.1E-42 7.2E-47  280.3  17.9  218   10-237    63-285 (287)
127 3byv_A Rhoptry kinase; malaria 100.0 2.9E-44   1E-48  301.9   7.1  211    8-237   113-368 (377)
128 3s95_A LIMK-1, LIM domain kina 100.0 1.1E-41 3.7E-46  279.0  22.2  217    7-234    46-279 (310)
129 2fst_X Mitogen-activated prote 100.0 1.9E-42 6.5E-47  289.6  17.6  225    8-238    68-321 (367)
130 2psq_A Fibroblast growth facto 100.0 7.3E-42 2.5E-46  286.5  21.1  213    8-229   126-358 (370)
131 1z57_A Dual specificity protei 100.0 4.2E-42 1.4E-46  284.3  19.4  225    4-237    47-337 (339)
132 3ork_A Serine/threonine protei 100.0   3E-43   1E-47  288.4  12.2  227    8-241    52-286 (311)
133 3kvw_A DYRK2, dual specificity 100.0 5.5E-42 1.9E-46  292.4  20.3  229    3-236   128-416 (429)
134 3an0_A Dual specificity mitoge 100.0 2.4E-42 8.2E-47  286.4  16.7  231   10-249    91-331 (340)
135 2wtk_C Serine/threonine-protei 100.0 1.1E-41 3.8E-46  278.1  20.1  217   10-237    48-272 (305)
136 3kul_A Ephrin type-A receptor  100.0 8.3E-42 2.8E-46  281.5  19.5  212    8-228    90-306 (325)
137 4hcu_A Tyrosine-protein kinase 100.0 3.8E-42 1.3E-46  276.2  16.3  216    5-229    42-260 (269)
138 3qup_A Tyrosine-protein kinase 100.0 8.8E-42   3E-46  281.0  18.6  224    8-240    65-310 (323)
139 2xrw_A Mitogen-activated prote 100.0 4.5E-42 1.5E-46  288.0  16.6  225    8-237    64-327 (371)
140 1zy4_A Serine/threonine-protei 100.0 1.7E-41   6E-46  276.4  19.6  225    3-237    37-292 (303)
141 4e7w_A Glycogen synthase kinas 100.0 2.3E-41 7.9E-46  285.7  20.9  222   16-240    80-333 (394)
142 1blx_A Cyclin-dependent kinase 100.0 1.1E-41 3.7E-46  280.8  18.3  230   13-248    56-316 (326)
143 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.5E-42 1.9E-46  275.1  16.0  214    7-229    42-258 (268)
144 3q60_A ROP5B; pseudokinase, tr 100.0 6.4E-43 2.2E-47  293.2  10.9  223    8-238   102-362 (371)
145 2ycf_A Serine/threonine-protei 100.0 5.1E-42 1.8E-46  282.4  16.0  219   10-237    57-283 (322)
146 3eb0_A Putative uncharacterize 100.0 1.9E-41 6.4E-46  285.4  19.6  220   15-237    47-330 (383)
147 2ivs_A Proto-oncogene tyrosine 100.0 2.2E-41 7.6E-46  277.4  19.3  213    8-229    66-305 (314)
148 1wak_A Serine/threonine-protei 100.0 4.7E-42 1.6E-46  290.1  15.4  227    3-234    68-397 (397)
149 2b9h_A MAP kinase FUS3, mitoge 100.0 1.6E-41 5.5E-46  282.7  18.5  229    8-239    49-316 (353)
150 4euu_A Serine/threonine-protei 100.0 8.8E-42   3E-46  280.7  16.5  216   10-230    49-304 (319)
151 3nsz_A CK II alpha, casein kin 100.0 2.1E-41 7.2E-46  279.5  18.8  222   11-237    73-328 (330)
152 3l9p_A Anaplastic lymphoma kin 100.0 9.2E-42 3.2E-46  285.6  16.8  217    8-233   114-343 (367)
153 3tt0_A Basic fibroblast growth 100.0 3.1E-41 1.1E-45  284.0  20.0  213    8-229   114-346 (382)
154 1luf_A Muscle-specific tyrosin 100.0   2E-41 6.8E-46  281.0  18.5  212    8-228    90-328 (343)
155 3cek_A Dual specificity protei 100.0 2.6E-41   9E-46  277.1  18.9  225    7-240    65-304 (313)
156 3gen_A Tyrosine-protein kinase 100.0 9.8E-42 3.4E-46  275.7  16.0  211   10-229    61-274 (283)
157 2eu9_A Dual specificity protei 100.0 1.7E-41 5.9E-46  282.5  17.9  229    5-242    53-347 (355)
158 2dyl_A Dual specificity mitoge 100.0 6.1E-41 2.1E-45  275.3  20.6  232    8-248    64-303 (318)
159 2wqm_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45  272.4  22.4  215    8-228    72-290 (310)
160 4exu_A Mitogen-activated prote 100.0   3E-41   1E-45  283.0  18.6  224    8-238    81-333 (371)
161 3e3p_A Protein kinase, putativ 100.0 1.3E-41 4.4E-46  284.0  16.2  233    5-240    56-326 (360)
162 3pg1_A Mitogen-activated prote 100.0   2E-41 6.8E-46  283.2  17.3  227    8-237    69-325 (362)
163 1j1b_A Glycogen synthase kinas 100.0 1.5E-40 5.3E-45  282.8  22.7  223   15-240    94-348 (420)
164 1k9a_A Carboxyl-terminal SRC k 100.0 3.8E-41 1.3E-45  289.0  19.0  213    4-228   222-438 (450)
165 3ugc_A Tyrosine-protein kinase 100.0 3.5E-41 1.2E-45  274.1  17.5  219    8-228    51-284 (295)
166 1rjb_A FL cytokine receptor; k 100.0 2.6E-41 8.8E-46  280.6  17.0  215    8-230    88-329 (344)
167 3fhr_A MAP kinase-activated pr 100.0 1.7E-41 5.7E-46  280.9  15.8  212   21-236    75-295 (336)
168 1csn_A Casein kinase-1; phosph 100.0 2.5E-41 8.4E-46  275.2  16.5  218    9-229    46-277 (298)
169 3dtc_A Mitogen-activated prote 100.0 3.3E-41 1.1E-45  270.9  16.8  208   11-229    49-267 (271)
170 3soc_A Activin receptor type-2 100.0 4.1E-41 1.4E-45  277.0  17.5  225    2-228    52-311 (322)
171 1mp8_A Focal adhesion kinase 1 100.0 5.8E-41   2E-45  271.0  18.0  212    8-229    56-270 (281)
172 3vhe_A Vascular endothelial gr 100.0 1.6E-41 5.6E-46  283.3  15.3  214    8-229    65-349 (359)
173 2qol_A Ephrin receptor; recept 100.0 5.6E-41 1.9E-45  281.4  18.3  212    8-228    86-302 (373)
174 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-41 8.3E-46  284.1  16.0  212    8-228   152-367 (377)
175 2i6l_A Mitogen-activated prote 100.0 5.3E-41 1.8E-45  275.7  17.7  227    8-237    48-314 (320)
176 2izr_A Casein kinase I isoform 100.0 1.3E-41 4.4E-46  280.9  14.0  215   10-228    46-274 (330)
177 3kmu_A ILK, integrin-linked ki 100.0 1.2E-40 4.2E-45  267.3  19.2  208    8-228    47-263 (271)
178 2vx3_A Dual specificity tyrosi 100.0   1E-40 3.5E-45  280.8  19.5  231    3-237    85-381 (382)
179 3t9t_A Tyrosine-protein kinase 100.0 2.8E-41 9.7E-46  270.7  15.3  216    5-229    40-258 (267)
180 3coi_A Mitogen-activated prote 100.0   5E-41 1.7E-45  279.9  17.3  224    8-238    63-315 (353)
181 1t46_A HOMO sapiens V-KIT hard 100.0   5E-41 1.7E-45  275.2  16.9  214    8-229    66-301 (313)
182 1fvr_A Tyrosine-protein kinase 100.0 8.7E-41   3E-45  275.6  18.1  212    8-229    65-294 (327)
183 4e5w_A Tyrosine-protein kinase 100.0 8.9E-41   3E-45  272.4  17.8  217   10-228    65-295 (302)
184 3aln_A Dual specificity mitoge 100.0 5.9E-41   2E-45  276.6  16.9  227    9-244    61-301 (327)
185 1xbb_A Tyrosine-protein kinase 100.0 1.4E-40 4.8E-45  270.0  18.7  210    9-228    59-272 (291)
186 1q8y_A SR protein kinase; tran 100.0   2E-41 6.9E-46  284.1  14.1  230    3-238    50-343 (373)
187 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-40 4.6E-45  269.9  18.4  216    8-228    60-281 (289)
188 3kfa_A Tyrosine-protein kinase 100.0 5.4E-41 1.9E-45  271.9  15.7  217    3-228    44-264 (288)
189 1u59_A Tyrosine-protein kinase 100.0 2.1E-40 7.3E-45  268.5  19.1  213    8-230    50-267 (287)
190 1p4o_A Insulin-like growth fac 100.0 2.5E-40 8.4E-45  272.2  19.4  213    8-229    68-293 (322)
191 1mqb_A Ephrin type-A receptor  100.0 2.8E-40 9.7E-45  273.2  19.6  213    8-229    86-303 (333)
192 2h34_A Serine/threonine-protei 100.0   9E-40 3.1E-44  267.5  22.3  213    8-228    74-289 (309)
193 2yfx_A Tyrosine-protein kinase 100.0 7.7E-41 2.6E-45  275.9  16.0  218    8-234    73-303 (327)
194 2pvf_A Fibroblast growth facto 100.0 2.6E-40 9.1E-45  273.5  18.4  213    8-229    80-312 (334)
195 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-40 3.8E-45  289.1  16.1  212    8-228   256-471 (495)
196 3pls_A Macrophage-stimulating  100.0 1.3E-39 4.3E-44  265.1  21.4  213    7-228    61-280 (298)
197 2qkw_B Protein kinase; three-h 100.0   3E-40   1E-44  271.7  17.7  221    9-230    76-310 (321)
198 1qcf_A Haematopoetic cell kina 100.0   1E-40 3.5E-45  286.7  15.5  214    5-228   220-437 (454)
199 3lxl_A Tyrosine-protein kinase 100.0 3.1E-40 1.1E-44  272.3  17.7  220    8-229    64-297 (327)
200 2i1m_A Macrophage colony-stimu 100.0 1.6E-40 5.6E-45  274.6  16.0  213    8-228    89-319 (333)
201 3poz_A Epidermal growth factor 100.0 2.2E-40 7.6E-45  273.2  16.7  212    8-229    57-272 (327)
202 3brb_A Proto-oncogene tyrosine 100.0 5.8E-40   2E-44  269.0  19.1  213    8-229    76-302 (313)
203 3lxp_A Non-receptor tyrosine-p 100.0   5E-40 1.7E-44  270.1  18.7  218    8-228    73-303 (318)
204 2rio_A Serine/threonine-protei 100.0 6.1E-41 2.1E-45  286.5  13.6  217   12-235    52-302 (434)
205 1qpc_A LCK kinase; alpha beta  100.0 2.3E-40   8E-45  267.1  16.2  214    5-228    45-262 (279)
206 3cc6_A Protein tyrosine kinase 100.0 4.9E-40 1.7E-44  265.5  18.0  212    8-229    53-267 (281)
207 1u46_A ACK-1, activated CDC42  100.0 3.1E-40 1.1E-44  267.8  16.8  211    9-228    62-277 (291)
208 1byg_A CSK, protein (C-termina 100.0 1.3E-40 4.4E-45  268.5  14.0  213    4-228    50-266 (278)
209 4f0f_A Serine/threonine-protei 100.0 2.5E-39 8.4E-44  262.1  21.4  205   13-228    68-282 (287)
210 2v62_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45  277.1  13.6  212   13-228    93-321 (345)
211 3f66_A Hepatocyte growth facto 100.0 1.2E-39 4.2E-44  265.3  19.6  213    7-228    65-284 (298)
212 3uim_A Brassinosteroid insensi 100.0 1.8E-40 6.1E-45  273.6  14.6  223   13-236    72-312 (326)
213 4hgt_A Casein kinase I isoform 100.0 4.7E-40 1.6E-44  267.3  16.9  224    2-228    38-273 (296)
214 4fvq_A Tyrosine-protein kinase 100.0 2.3E-40 7.9E-45  268.4  14.8  207    8-229    52-269 (289)
215 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-40 7.9E-45  284.3  15.5  215   10-234   221-441 (452)
216 3c1x_A Hepatocyte growth facto 100.0 3.7E-40 1.3E-44  276.2  16.2  213    8-229   130-349 (373)
217 3a99_A Proto-oncogene serine/t 100.0 8.9E-40   3E-44  268.8  18.0  207   13-237    91-302 (320)
218 2eva_A TAK1 kinase - TAB1 chim 100.0 8.1E-40 2.8E-44  267.6  17.6  216    3-229    36-257 (307)
219 2xir_A Vascular endothelial gr 100.0 3.2E-40 1.1E-44  270.8  15.1  214    8-229    70-304 (316)
220 3p23_A Serine/threonine-protei 100.0 4.4E-40 1.5E-44  280.6  16.4  213   14-236    63-291 (432)
221 3lzb_A Epidermal growth factor 100.0 1.3E-39 4.4E-44  268.6  18.6  211    8-228    57-271 (327)
222 4fl3_A Tyrosine-protein kinase 100.0   6E-40 2.1E-44  291.7  17.7  210    9-228   411-624 (635)
223 3uzp_A CKI-delta, CKID, casein 100.0   7E-40 2.4E-44  266.4  16.3  215   11-228    47-273 (296)
224 2iwi_A Serine/threonine-protei 100.0 2.1E-40 7.3E-45  271.5  12.9  210   11-238    77-293 (312)
225 3kex_A Receptor tyrosine-prote 100.0 7.8E-40 2.7E-44  269.7  16.3  208   12-229    59-270 (325)
226 2nru_A Interleukin-1 receptor- 100.0 1.3E-39 4.5E-44  266.2  17.5  219    8-229    70-300 (307)
227 3op5_A Serine/threonine-protei 100.0 6.8E-40 2.3E-44  274.1  16.1  210   14-228    94-322 (364)
228 3mdy_A Bone morphogenetic prot 100.0   3E-39   1E-43  267.3  19.5  211   15-229    76-325 (337)
229 3q4u_A Activin receptor type-1 100.0 1.9E-39 6.5E-44  264.4  18.1  212   13-228    45-295 (301)
230 2a19_B Interferon-induced, dou 100.0 2.8E-39 9.6E-44  261.2  18.6  207   13-234    49-273 (284)
231 2ozo_A Tyrosine-protein kinase 100.0 1.7E-39 5.7E-44  288.1  18.7  210    9-228   377-591 (613)
232 2w1i_A JAK2; chromosomal rearr 100.0 1.8E-39 6.1E-44  267.7  17.1  219    8-228    82-315 (326)
233 2buj_A Serine/threonine-protei 100.0   1E-39 3.4E-44  268.0  15.3  215    8-229    66-300 (317)
234 2jii_A Serine/threonine-protei 100.0 9.3E-40 3.2E-44  272.1  14.7  212   13-228    87-329 (352)
235 3qa8_A MGC80376 protein; kinas 100.0 4.3E-40 1.5E-44  290.3  12.1  228    7-236    51-305 (676)
236 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.1E-40 1.8E-44  269.9  11.4  209   11-228    72-295 (319)
237 2h8h_A Proto-oncogene tyrosine 100.0 9.8E-40 3.3E-44  285.6  13.8  216    9-234   303-524 (535)
238 3ll6_A Cyclin G-associated kin 100.0 6.1E-39 2.1E-43  265.3  15.3  210    8-230    65-303 (337)
239 3g2f_A Bone morphogenetic prot 100.0 5.1E-39 1.7E-43  265.9  14.6  222   14-237    53-326 (336)
240 1b6c_B TGF-B superfamily recep 100.0 1.4E-38 4.9E-43  263.8  16.5  214   12-229    78-330 (342)
241 2j0j_A Focal adhesion kinase 1 100.0   3E-38   1E-42  281.7  19.6  212    7-228   430-644 (656)
242 3sv0_A Casein kinase I-like; t 100.0 1.1E-38 3.8E-43  274.8  16.1  224    2-228    36-271 (483)
243 4eut_A Serine/threonine-protei 100.0 2.5E-39 8.6E-44  273.5  11.1  215   10-229    49-303 (396)
244 3m2w_A MAP kinase-activated pr 100.0 4.2E-38 1.4E-42  256.4  17.4  199   13-237    55-265 (299)
245 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.5E-37 5.2E-42  260.0  15.4  212   11-236   107-342 (365)
246 3gxj_A TGF-beta receptor type- 100.0 1.2E-39 4.1E-44  265.7   1.8  214   11-228    38-290 (303)
247 3dzo_A Rhoptry kinase domain;  100.0 1.8E-37 6.2E-42  263.4  11.8  211   10-239   120-374 (413)
248 2pzi_A Probable serine/threoni 100.0 1.3E-36 4.4E-41  273.1  10.2  204    8-235   119-327 (681)
249 2vuw_A Serine/threonine-protei 100.0 2.2E-36 7.4E-41  250.3   7.3  203   12-233    67-336 (336)
250 3uqc_A Probable conserved tran 100.0 7.8E-35 2.7E-39  235.6  12.4  186    9-229    72-259 (286)
251 4azs_A Methyltransferase WBDD; 100.0 1.8E-33 6.1E-38  246.9   7.3  154    8-166   281-435 (569)
252 3en9_A Glycoprotease, O-sialog  99.9   7E-25 2.4E-29  191.4   2.2  149   10-169   381-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.7 7.4E-19 2.5E-23  141.4   4.0  106   11-142   147-252 (282)
254 1zth_A RIO1 serine protein kin  99.5 4.9E-15 1.7E-19  117.6   5.6   97   12-118   114-218 (258)
255 4gyi_A RIO2 kinase; protein ki  99.2 4.2E-12 1.5E-16  105.3   4.8   95   15-118   160-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.0 7.6E-10 2.6E-14   87.7   7.7  101   12-117    53-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  98.9 2.2E-10 7.5E-15   90.5   1.3   96   13-117    58-213 (264)
258 3dxp_A Putative acyl-COA dehyd  98.9 1.3E-09 4.5E-14   90.3   5.7  106   11-118    79-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.8   3E-09   1E-13   86.1   3.4  164    3-169    45-287 (304)
260 3r70_A Aminoglycoside phosphot  98.5 1.3E-07 4.3E-12   77.1   6.9  110    3-118    62-237 (320)
261 3tdw_A Gentamicin resistance p  98.4 7.6E-07 2.6E-11   72.0   9.0  113    4-118    45-224 (306)
262 4gkh_A Aminoglycoside 3'-phosp  98.4 1.4E-06 4.6E-11   69.1  10.3  103   11-117    62-222 (272)
263 2yle_A Protein spire homolog 1  98.2 3.9E-05 1.3E-09   57.9  12.6  136   53-228    33-194 (229)
264 3ovc_A Hygromycin-B 4-O-kinase  97.9 1.2E-05 4.2E-10   66.5   5.2   31   88-118   213-243 (362)
265 3ats_A Putative uncharacterize  97.8 1.4E-05 4.7E-10   65.9   3.8   31   88-118   222-252 (357)
266 2q83_A YTAA protein; 2635576,   97.6 0.00046 1.6E-08   56.2   9.8   31   87-117   221-251 (346)
267 3dxq_A Choline/ethanolamine ki  97.3 0.00014 4.9E-09   58.4   3.3   30   88-118   173-202 (301)
268 2olc_A MTR kinase, methylthior  96.9  0.0012 4.2E-08   55.0   5.6   29   88-117   227-255 (397)
269 3csv_A Aminoglycoside phosphot  96.9  0.0022 7.6E-08   52.1   7.0   31   88-118   183-217 (333)
270 3jr1_A Putative fructosamine-3  96.7  0.0023 7.7E-08   51.7   5.5   44   12-55     72-118 (312)
271 3d1u_A Putative fructosamine-3  96.3  0.0052 1.8E-07   48.9   5.1   40   12-55     55-97  (288)
272 2pyw_A Uncharacterized protein  95.5   0.013 4.5E-07   49.2   4.7   30   88-118   232-261 (420)
273 4ano_A ESSB; membrane protein,  94.0    0.39 1.3E-05   36.2   8.8  114   26-170    48-163 (219)
274 2ppq_A HSK, HK, homoserine kin  93.6   0.021 7.2E-07   45.9   1.4   31   88-118   187-217 (322)
275 1zyl_A Hypothetical protein YI  93.4   0.082 2.8E-06   42.5   4.6   28   88-117   195-222 (328)
276 2qg7_A Ethanolamine kinase PV0  93.3   0.068 2.3E-06   45.5   4.1   36   16-55    152-188 (458)
277 3i1a_A Spectinomycin phosphotr  93.3   0.073 2.5E-06   43.3   4.1   31   88-118   206-236 (339)
278 4ann_A ESSB; membrane protein,  92.9    0.28 9.5E-06   36.9   6.4  115   26-170    43-158 (215)
279 3c5i_A Choline kinase; choline  92.7    0.14 4.7E-06   42.1   5.0   29   88-117   212-240 (369)
280 1nw1_A Choline kinase (49.2 KD  92.4   0.055 1.9E-06   45.6   2.2   18   88-105   249-266 (429)
281 3feg_A Choline/ethanolamine ki  91.7    0.11 3.7E-06   43.0   3.2  103   12-118    97-254 (379)
282 3f2s_A CK, chetk-alpha, cholin  91.6    0.11 3.7E-06   43.3   3.1   30   88-117   244-279 (401)
283 3g15_A CK, chetk-alpha, cholin  87.4    0.28 9.4E-06   40.9   2.4   30   89-118   245-280 (401)
284 3mes_A Choline kinase; malaria  85.5    0.67 2.3E-05   38.9   3.8   30   88-118   262-291 (424)
285 2x6h_A GH13170P, VPS34, phosph  77.7      12 0.00039   33.6   8.8   45   68-117   529-575 (696)
286 3f7w_A Putative fructosamine-3  74.4     1.1 3.6E-05   35.2   1.3   25   88-113   188-212 (288)
287 3ls8_A Phosphatidylinositol 3-  66.8      35  0.0012   30.0   9.2   81   31-117   402-501 (614)
288 3feg_A Choline/ethanolamine ki  59.8     1.4 4.8E-05   36.3  -0.8   17   72-89    146-162 (379)
289 1e7u_A Phosphatidylinositol 3-  47.8      37  0.0012   31.7   6.3   25   93-117   804-828 (961)
290 3f2s_A CK, chetk-alpha, cholin  44.4      10 0.00035   31.5   2.0   62   15-89    121-183 (401)
291 3bpy_A FORK head domain, forkh  41.3      15  0.0005   23.0   1.9   33  205-237    10-47  (85)
292 3oja_A Leucine-rich immune mol  40.7       1 3.5E-05   38.4  -4.7   31   10-40    321-351 (487)
293 1zyl_A Hypothetical protein YI  39.9      11 0.00037   29.8   1.5   64   12-86     64-134 (328)
294 2y3a_A Phosphatidylinositol-4,  38.6      64  0.0022   30.6   6.5   25   93-117   940-964 (1092)
295 3l2c_A Forkhead box protein O4  31.7      25 0.00084   23.2   1.9   33  205-237    29-66  (110)
296 3eps_A Isocitrate dehydrogenas  31.5 1.4E+02   0.005   25.7   6.9   64   53-120   420-483 (578)
297 3mes_A Choline kinase; malaria  28.9      22 0.00076   29.7   1.7   59   16-86    121-180 (424)
298 1nw1_A Choline kinase (49.2 KD  28.6      18 0.00063   30.1   1.1   64   13-89    120-184 (429)
299 3coa_C Forkhead box protein O1  28.2      36  0.0012   22.6   2.3   32  205-236    16-52  (117)
300 2pyw_A Uncharacterized protein  26.0      80  0.0027   25.9   4.6   52   28-86     99-152 (420)
301 2wxf_A Phosphatidylinositol-4,  25.7      29   0.001   32.3   2.0   25   93-117   788-812 (940)
302 2fq3_A Transcription regulator  23.0      59   0.002   21.1   2.5   26  204-229    51-76  (104)
303 3hhm_A Phosphatidylinositol-4,  20.7      59   0.002   30.8   2.9   25   93-117   937-961 (1091)

No 1  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1.2e-56  Score=368.34  Aligned_cols=219  Identities=35%  Similarity=0.629  Sum_probs=192.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ..++.+.+|+++|++++|||||+++++|.+++.+|+|||||+||+|.+++.+ +++++..+..++.||+.||+|||+ .|
T Consensus       113 ~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~-~~  190 (346)
T 4fih_A          113 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHA-QG  190 (346)
T ss_dssp             SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            3456788999999999999999999999999999999999999999999976 679999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      |+||||||+|||++.+|.+||+|||+|.............+||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus       191 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF  270 (346)
T 4fih_A          191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY  270 (346)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            99999999999999999999999999988766655666789999999999999989999999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCCCC-CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPPPS-APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .+.+..       +....+.....+. .....+++++.+||.+||+.||++|||++|+|+||||++...
T Consensus       271 ~~~~~~-------~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          271 FNEPPL-------KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             TTSCHH-------HHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CCcCHH-------HHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence            874432       3333443333322 223468999999999999999999999999999999987654


No 2  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=4.7e-56  Score=357.98  Aligned_cols=218  Identities=31%  Similarity=0.590  Sum_probs=189.1

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE----CCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYS----NGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~   82 (262)
                      .+...++++.+|++++++++|||||+++++|.+    +..+|+|||||+||+|.+++.+.+.+++..+..++.|++.||+
T Consensus        64 ~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~  143 (290)
T 3fpq_A           64 LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQ  143 (290)
T ss_dssp             SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            356677899999999999999999999999875    3568999999999999999999999999999999999999999


Q ss_pred             HHhhcCC--eeeCCCCCCCEEEcc-CCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHH
Q 024828           83 YLHHEKH--IIHRDLKPSNLLINH-RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVL  159 (262)
Q Consensus        83 ~lh~~~~--i~H~dl~p~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l  159 (262)
                      |||+ .|  |+||||||+|||++. ++.+||+|||+|....  .......+||+.|+|||++.+ .++.++|||||||++
T Consensus       144 ylH~-~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvil  219 (290)
T 3fpq_A          144 FLHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCM  219 (290)
T ss_dssp             HHHT-SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHH
T ss_pred             HHHH-CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHH
Confidence            9998 88  999999999999974 7899999999997532  233445689999999999875 699999999999999


Q ss_pred             HHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          160 LECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       160 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      |+|++|+.||.+...      .......+..+..+...+...++++.+||.+||..||++|||++|+|+||||++
T Consensus       220 yelltg~~Pf~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          220 LEMATSEYPYSECQN------AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHSSCTTTTCSS------HHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHCCCCCCCCCc------HHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            999999999976433      224455566665555555678899999999999999999999999999999985


No 3  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1e-56  Score=369.40  Aligned_cols=222  Identities=27%  Similarity=0.487  Sum_probs=194.4

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      .++..++++.+|++++++++|||||++++++.+++.+|+|||||+||+|.+++...+  .+++..+..++.||+.||+||
T Consensus        62 ~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~yl  141 (350)
T 4b9d_A           62 MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV  141 (350)
T ss_dssp             SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            356678899999999999999999999999999999999999999999999997553  578999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                      |+ .||+||||||+|||++.+|.+||+|||+|.............+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       142 H~-~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemlt  220 (350)
T 4b9d_A          142 HD-RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT  220 (350)
T ss_dssp             HH-TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HH-CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH
Confidence            99 99999999999999999999999999999876543333345679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      |+.||.+.+.       .+....+..+..+.. ...+++++.+||.+||+.||++|||++|+|+||||++..+
T Consensus       221 G~~PF~~~~~-------~~~~~~i~~~~~~~~-~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~  285 (350)
T 4b9d_A          221 LKHAFEAGSM-------KNLVLKIISGSFPPV-SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIE  285 (350)
T ss_dssp             SSCSCCCSSH-------HHHHHHHHHTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTGG
T ss_pred             CCCCCCCcCH-------HHHHHHHHcCCCCCC-CccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCCC
Confidence            9999987543       344455555554433 3578999999999999999999999999999999976443


No 4  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=2.1e-56  Score=361.91  Aligned_cols=221  Identities=28%  Similarity=0.503  Sum_probs=194.4

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ...+.+.+|+++|++++||||++++++|++++.+|+|||||+||+|.+++++.+.+++..+..++.||+.||+|||+ +|
T Consensus        74 ~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~-~~  152 (311)
T 4aw0_A           74 NKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-KG  152 (311)
T ss_dssp             TCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            44578999999999999999999999999999999999999999999999999999999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCC--CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      |+||||||+|||++.++.++|+|||+|.......  ....+.+||+.|+|||++.+..++.++|+||+||++|+|++|+.
T Consensus       153 IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~  232 (311)
T 4aw0_A          153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP  232 (311)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999998764332  23456789999999999999899999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHH------HhcCccccccCCccc
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQE------LMTHPFLKMYGDLNV  240 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~------~l~h~~~~~~~~~~~  240 (262)
                      ||.+.+.       .+....+......  .+..+++++++||.+||..||++|||++|      +++||||+......+
T Consensus       233 PF~~~~~-------~~~~~~i~~~~~~--~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l  302 (311)
T 4aw0_A          233 PFRAGNE-------GLIFAKIIKLEYD--FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL  302 (311)
T ss_dssp             SSCCSSH-------HHHHHHHHHTCCC--CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTG
T ss_pred             CCCCCCH-------HHHHHHHHcCCCC--CCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHh
Confidence            9987543       2344444444332  23578999999999999999999999987      589999998775544


No 5  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.4e-56  Score=362.80  Aligned_cols=216  Identities=30%  Similarity=0.490  Sum_probs=184.7

Q ss_pred             HHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCee
Q 024828           12 RRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHII   91 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~   91 (262)
                      ..++.+|++++++++||||+++++++.+++.+|+|||||+||+|.+++.+.+.+++..+..++.|++.||+|||+ .||+
T Consensus        70 ~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~-~~Ii  148 (304)
T 3ubd_A           70 RVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS-LGII  148 (304)
T ss_dssp             CC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-TTCC
T ss_pred             HHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCc
Confidence            446889999999999999999999999999999999999999999999999999999999999999999999999 9999


Q ss_pred             eCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 024828           92 HRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYSP  171 (262)
Q Consensus        92 H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  171 (262)
                      ||||||+|||++.+|.++|+|||+|..............||+.|+|||++.+..++.++||||+||++|+|++|+.||.+
T Consensus       149 HRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~  228 (304)
T 3ubd_A          149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG  228 (304)
T ss_dssp             CSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC
Confidence            99999999999999999999999998765555555667899999999999999999999999999999999999999987


Q ss_pred             CCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCC-----HHHHhcCccccccCC
Q 024828          172 PEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLS-----AQELMTHPFLKMYGD  237 (262)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt-----~~~~l~h~~~~~~~~  237 (262)
                      .+..       +....+......  .+..+|+++.+||.+||+.||++|||     ++|+++||||+....
T Consensus       229 ~~~~-------~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw  290 (304)
T 3ubd_A          229 KDRK-------ETMTMILKAKLG--MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDW  290 (304)
T ss_dssp             SSHH-------HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             cCHH-------HHHHHHHcCCCC--CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCH
Confidence            5432       344444444432  23578999999999999999999998     589999999998753


No 6  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=9e-55  Score=365.58  Aligned_cols=219  Identities=35%  Similarity=0.626  Sum_probs=193.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ..++.+.+|+++|++++|||||+++++|.+++.+|+|||||+||+|.++++. +.+++..+..++.||+.||+|||+ .|
T Consensus       190 ~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~-~~  267 (423)
T 4fie_A          190 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHA-QG  267 (423)
T ss_dssp             SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            3456788999999999999999999999999999999999999999999976 679999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      |+||||||+|||++.+|.+||+|||+|.............+||+.|+|||++.+..|+.++|||||||++|+|++|+.||
T Consensus       268 IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF  347 (423)
T 4fie_A          268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY  347 (423)
T ss_dssp             EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             eecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            99999999999999999999999999987766555666778999999999999999999999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPPP-SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .+....       +....+.....+ ......+++++.+||.+||..||++|||++|+|+||||++...
T Consensus       348 ~~~~~~-------~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~  409 (423)
T 4fie_A          348 FNEPPL-------KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  409 (423)
T ss_dssp             TTSCHH-------HHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CCcCHH-------HHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence            864432       333344333332 2233578999999999999999999999999999999997654


No 7  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=4.1e-55  Score=349.68  Aligned_cols=215  Identities=29%  Similarity=0.509  Sum_probs=178.2

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +....+++.+|++++++++||||+++++++.+++.+|+||||+ +|+|.+++.+++++++..+..++.|++.||+|||+ 
T Consensus        53 ~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~-  130 (275)
T 3hyh_A           53 KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR-  130 (275)
T ss_dssp             ---CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            3455678999999999999999999999999999999999999 56999999999999999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHHhCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~  166 (262)
                      .|++||||||+||+++.++.++|+|||+|...... .......||+.|+|||++.+..+ +.++||||+||++|+|++|+
T Consensus       131 ~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~  209 (275)
T 3hyh_A          131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR  209 (275)
T ss_dssp             TTCCCCCCCTTTEEECTTCCEEECCSSCC----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCcccccCChHHeEECCCCCEEEeecCCCeecCCC-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCC
Confidence            99999999999999999999999999999765433 23345689999999999998775 68999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      .||.+.+.       ....+.+..+...  .+..+++++.+||.+||+.||++|||++|+++||||+.
T Consensus       210 ~PF~~~~~-------~~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          210 LPFDDESI-------PVLFKNISNGVYT--LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             CSSCCSSH-------HHHHHHHHHTCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             CCCCCCCH-------HHHHHHHHcCCCC--CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence            99986432       2344444444432  23578999999999999999999999999999999974


No 8  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=1.3e-53  Score=349.36  Aligned_cols=217  Identities=28%  Similarity=0.439  Sum_probs=185.4

Q ss_pred             HHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeeCCC
Q 024828           16 AQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHIIHRDL   95 (262)
Q Consensus        16 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl   95 (262)
                      .+|++++++++|||||++++++.+++.+|+|||||+|++|.+++++.+.+++..+..++.|++.||+|||+ .||+||||
T Consensus        98 ~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~-~~IiHRDl  176 (336)
T 4g3f_A           98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHT-RRILHGDV  176 (336)
T ss_dssp             THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT-TTEECSCC
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccc
Confidence            47999999999999999999999999999999999999999999999999999999999999999999998 99999999


Q ss_pred             CCCCEEEccCC-cEEEEecccccccccCCC-----CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 024828           96 KPSNLLINHRG-EVKITDFGVSAIMASTSG-----QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        96 ~p~nil~~~~~-~~~l~df~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      ||+|||++.+| .+||+|||+|........     .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus       177 Kp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf  256 (336)
T 4g3f_A          177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW  256 (336)
T ss_dssp             CGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCC
Confidence            99999999887 699999999986543221     122357999999999999999999999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHH-------------hcCcccccc
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPP-PSAPSDQFSPEFCSFISACVQKEPQQRLSAQEL-------------MTHPFLKMY  235 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~-------------l~h~~~~~~  235 (262)
                      .+....+..       ..+..... ....+..+++++.+||.+||+.||.+|||+.|+             ++|||++..
T Consensus       257 ~~~~~~~~~-------~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          257 TQYFRGPLC-------LKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             TTTCCSCCH-------HHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             CCCCHHHHH-------HHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            876655432       22222222 122345789999999999999999999999997             679999988


Q ss_pred             CCccc
Q 024828          236 GDLNV  240 (262)
Q Consensus       236 ~~~~~  240 (262)
                      .+.+-
T Consensus       330 ~~Pr~  334 (336)
T 4g3f_A          330 KEPRG  334 (336)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            76654


No 9  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=3.7e-52  Score=337.42  Aligned_cols=218  Identities=29%  Similarity=0.483  Sum_probs=188.4

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-------------CCCCHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-------------KTIPEEYLAAIC   74 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-------------~~~~~~~~~~i~   74 (262)
                      ++..++++.+|++++++++|||||++++++.+++..|+|||||++|+|.+++.+.             ..+++..+..++
T Consensus        55 ~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  134 (299)
T 4asz_A           55 SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA  134 (299)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHH
Confidence            5667889999999999999999999999999999999999999999999999764             358999999999


Q ss_pred             HHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCCCCCcchhH
Q 024828           75 EQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGGKYGYKSDI  152 (262)
Q Consensus        75 ~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di  152 (262)
                      .|++.||+|||+ .+++||||||+|||++.++.+||+|||+|+.......  ......||+.|+|||++.+..++.++||
T Consensus       135 ~qia~gl~yLH~-~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DV  213 (299)
T 4asz_A          135 QQIAAGMVYLAS-QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV  213 (299)
T ss_dssp             HHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHHHh-CCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhH
Confidence            999999999999 9999999999999999999999999999975533221  2223468999999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcc
Q 024828          153 WSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPF  231 (262)
Q Consensus       153 ~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~  231 (262)
                      |||||++|||+| |+.||.+...       .+....+..+..++.+ ..+|+++.+|+.+||+.||++|||++++  ++|
T Consensus       214 wS~Gvvl~Ellt~G~~Pf~~~~~-------~~~~~~i~~~~~~~~p-~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~  283 (299)
T 4asz_A          214 WSLGVVLWEIFTYGKQPWYQLSN-------NEVIECITQGRVLQRP-RTCPQEVYELMLGCWQREPHMRKNIKGI--HTL  283 (299)
T ss_dssp             HHHHHHHHHHHTTTCCTTTTSCH-------HHHHHHHHHTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHH
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHcCCCCCCC-ccchHHHHHHHHHHcCCChhHCcCHHHH--HHH
Confidence            999999999998 8999987543       2445555556554443 5789999999999999999999999999  567


Q ss_pred             ccccC
Q 024828          232 LKMYG  236 (262)
Q Consensus       232 ~~~~~  236 (262)
                      ++...
T Consensus       284 L~~~~  288 (299)
T 4asz_A          284 LQNLA  288 (299)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76543


No 10 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=3.7e-51  Score=331.78  Aligned_cols=216  Identities=24%  Similarity=0.416  Sum_probs=176.0

Q ss_pred             chhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 024828            6 NVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         6 ~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      ..+.+..+++.+|++++++++|||||++++++.+ +.+++|||||+||+|.+++... +++++..+..++.|++.||+||
T Consensus        70 ~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yL  148 (307)
T 3omv_A           70 DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL  148 (307)
T ss_dssp             SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3467778899999999999999999999998754 5689999999999999999765 5799999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccC--CCCcccccccccccCcccccC---CCCCcchhHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMAST--SGQANTFVGTYNYMSPERISG---GKYGYKSDIWSLGLVL  159 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l  159 (262)
                      |+ .||+||||||+|||++.++.+||+|||+|......  ........||+.|+|||++.+   ..++.++|||||||++
T Consensus       149 H~-~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl  227 (307)
T 3omv_A          149 HA-KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL  227 (307)
T ss_dssp             HH-TTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHH
T ss_pred             HH-CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHH
Confidence            99 99999999999999999999999999999765432  223345689999999999864   3589999999999999


Q ss_pred             HHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCC---CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          160 LECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPP---SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       160 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |||+||+.||.+.+...      .....+..+...   ......+++++.+|+.+||+.||++|||+.|++++
T Consensus       228 ~Elltg~~Pf~~~~~~~------~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          228 YELMTGELPYSHINNRD------QIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             HHHHHSSCTTTTCCCHH------HHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             HHHHHCCCCCCCCChHH------HHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999998654321      222333333222   22345789999999999999999999999987543


No 11 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=4.6e-51  Score=335.25  Aligned_cols=213  Identities=31%  Similarity=0.475  Sum_probs=179.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc---------------CCCCHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV---------------KTIPEEYLAA   72 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~---------------~~~~~~~~~~   72 (262)
                      ++..+++|.+|+++|++++|||||++++++.+++..|+|||||++|+|.+++.+.               +++++..+..
T Consensus        83 ~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~  162 (329)
T 4aoj_A           83 SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA  162 (329)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHH
Confidence            5677889999999999999999999999999999999999999999999999764               3589999999


Q ss_pred             HHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC--CCcccccccccccCcccccCCCCCcch
Q 024828           73 ICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGKYGYKS  150 (262)
Q Consensus        73 i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~  150 (262)
                      ++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......  .......||+.|+|||++.+..++.++
T Consensus       163 i~~qia~gl~yLH~-~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~s  241 (329)
T 4aoj_A          163 VASQVAAGMVYLAG-LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES  241 (329)
T ss_dssp             HHHHHHHHHHHHHH-TTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHH
T ss_pred             HHHHHHHHHHHHhc-CCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccc
Confidence            99999999999998 999999999999999999999999999997653322  222345789999999999999999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          151 DIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       151 Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |||||||++|||+| |+.||.....       .+....+..+..++.+ ..+++++.+|+.+||+.||++|||++|++++
T Consensus       242 DvwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~~~~i~~g~~~~~p-~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          242 DVWSFGVVLWEIFTYGKQPWYQLSN-------TEAIDCITQGRELERP-RACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTCSSCH-------HHHHHHHHHTCCCCCC-TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             cccchHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHcCCCCCCc-ccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            99999999999999 8999987543       2344555555554443 5789999999999999999999999999764


No 12 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=5.7e-51  Score=330.86  Aligned_cols=220  Identities=26%  Similarity=0.393  Sum_probs=173.0

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECC------------eEEEEEeecCCCCHHHHHHhcCC---CCHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNG------------AISIILEYMDGGSLADFLKKVKT---IPEEYLA   71 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------------~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~   71 (262)
                      ..+..++++.+|++++++++|||||+++++|.+.+            .+|+|||||+|++|.++++..+.   .+...+.
T Consensus        42 ~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~  121 (299)
T 4g31_A           42 NRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL  121 (299)
T ss_dssp             SSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHH
Confidence            35667788999999999999999999999987643            37999999999999999987654   4556788


Q ss_pred             HHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC------------CcccccccccccCcc
Q 024828           72 AICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG------------QANTFVGTYNYMSPE  139 (262)
Q Consensus        72 ~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~------------~~~~~~~~~~y~~PE  139 (262)
                      .++.|++.||+|||+ .||+||||||+|||++.++.+||+|||+|........            .....+||+.|+|||
T Consensus       122 ~i~~qi~~al~ylH~-~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE  200 (299)
T 4g31_A          122 HIFLQIAEAVEFLHS-KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE  200 (299)
T ss_dssp             HHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHH
T ss_pred             HHHHHHHHHHHHHHH-CcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHH
Confidence            999999999999999 9999999999999999999999999999976543221            122357999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCC
Q 024828          140 RISGGKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQ  219 (262)
Q Consensus       140 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  219 (262)
                      ++.+..++.++|||||||++|+|++   ||...      .........+.....++.. ...++.+.+||.+||+.||++
T Consensus       201 ~~~~~~y~~~~DiwSlGvilyell~---Pf~~~------~~~~~~~~~~~~~~~p~~~-~~~~~~~~~li~~~L~~dP~~  270 (299)
T 4g31_A          201 QIHGNSYSHKVDIFSLGLILFELLY---PFSTQ------MERVRTLTDVRNLKFPPLF-TQKYPCEYVMVQDMLSPSPME  270 (299)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH------HHHHHHHHHHHTTCCCHHH-HHHCHHHHHHHHHHTCSSGGG
T ss_pred             HHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc------cHHHHHHHHHhcCCCCCCC-cccCHHHHHHHHHHcCCChhH
Confidence            9999999999999999999999996   67532      1222333334333333221 234677889999999999999


Q ss_pred             CCCHHHHhcCccccccCC
Q 024828          220 RLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       220 Rpt~~~~l~h~~~~~~~~  237 (262)
                      |||+.|+++||||+....
T Consensus       271 Rps~~eil~h~~~~~~~~  288 (299)
T 4g31_A          271 RPEAINIIENAVFEDLDF  288 (299)
T ss_dssp             SCCHHHHHTSGGGCCC--
T ss_pred             CcCHHHHhcCHhhCCCCC
Confidence            999999999999987653


No 13 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.8e-50  Score=339.66  Aligned_cols=228  Identities=26%  Similarity=0.429  Sum_probs=184.5

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE------CCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYS------NGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l   81 (262)
                      .....+++.+|+++|++++||||+++++++..      .+.+|+|||||+ ++|.+++.+.+++++..+..++.||+.||
T Consensus        93 ~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al  171 (398)
T 4b99_A           93 VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGL  171 (398)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            45667789999999999999999999998764      367999999996 58999999989999999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccC----CCCcccccccccccCcccccCCC-CCcchhHHHHH
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMAST----SGQANTFVGTYNYMSPERISGGK-YGYKSDIWSLG  156 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG  156 (262)
                      +|||+ .||+||||||+|||++.++.++++|||++......    .......+||+.|+|||++.+.. ++.++||||+|
T Consensus       172 ~ylH~-~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG  250 (398)
T 4b99_A          172 KYMHS-AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG  250 (398)
T ss_dssp             HHHHH-TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             HHHHH-CcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhH
Confidence            99999 99999999999999999999999999999765332    22344568999999999988764 69999999999


Q ss_pred             HHHHHHHhCCCCCCCCCccCchhhHHHHH----------------HHHhcCCCCCCC------CCCCCHHHHHHHHHhhc
Q 024828          157 LVLLECATGQFPYSPPEQQDGWTSFYELM----------------EAIVDQPPPSAP------SDQFSPEFCSFISACVQ  214 (262)
Q Consensus       157 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~------~~~~~~~l~~li~~~l~  214 (262)
                      |++|+|++|++||.+.+..+....+....                ...........+      ....++++.+||.+||.
T Consensus       251 ~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~  330 (398)
T 4b99_A          251 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLR  330 (398)
T ss_dssp             HHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCc
Confidence            99999999999998765433221111110                000000000000      12468899999999999


Q ss_pred             CCcCCCCCHHHHhcCccccccCC
Q 024828          215 KEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       215 ~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .||++|||++|+|+||||+....
T Consensus       331 ~dP~~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          331 FEPSARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             SSTTTSCCHHHHTTSGGGTTTCC
T ss_pred             CChhHCcCHHHHhcCHhhCcCCC
Confidence            99999999999999999998764


No 14 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1e-50  Score=337.67  Aligned_cols=229  Identities=24%  Similarity=0.385  Sum_probs=178.6

Q ss_pred             cccchhHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 024828            3 IQMNVEESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l   81 (262)
                      +|.........++.+|+++|+.+ +||||++++++|.+++++|+||||++|++|.++++   .+++..+..++.|++.||
T Consensus        54 iK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al  130 (361)
T 4f9c_A           54 LKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKAL  130 (361)
T ss_dssp             EEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHH
T ss_pred             EEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHH
Confidence            33333334456788999999998 69999999999999999999999999999999984   599999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEccC-CcEEEEecccccccccCC----------------------------CCccccccc
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINHR-GEVKITDFGVSAIMASTS----------------------------GQANTFVGT  132 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~~-~~~~l~df~~~~~~~~~~----------------------------~~~~~~~~~  132 (262)
                      +|||+ .||+||||||+|||++.+ +.++|+|||+|.......                            ......+||
T Consensus       131 ~ylH~-~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT  209 (361)
T 4f9c_A          131 KRIHQ-FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGT  209 (361)
T ss_dssp             HHHHH-TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCC
T ss_pred             HHHHH-CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccC
Confidence            99999 999999999999999876 799999999996543211                            112345799


Q ss_pred             ccccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCccC-chhhHHH---------------------------
Q 024828          133 YNYMSPERISGGK-YGYKSDIWSLGLVLLECATGQFPYSPPEQQD-GWTSFYE---------------------------  183 (262)
Q Consensus       133 ~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~---------------------------  183 (262)
                      +.|+|||++.+.. ++.++||||+||++|+|++|+.||.....+. ....+..                           
T Consensus       210 ~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~  289 (361)
T 4f9c_A          210 PGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQ  289 (361)
T ss_dssp             GGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCC
T ss_pred             ccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcch
Confidence            9999999998764 8999999999999999999999996544321 1111100                           


Q ss_pred             ----HHHHHhc--------------CCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccccc
Q 024828          184 ----LMEAIVD--------------QPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMY  235 (262)
Q Consensus       184 ----~~~~~~~--------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~  235 (262)
                          ..+.+..              ..........+++++.+||++||+.||++|||++|+|+||||+..
T Consensus       290 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          290 DLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             CHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             hhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence                0000000              000011124578999999999999999999999999999999865


No 15 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1.1e-50  Score=330.18  Aligned_cols=213  Identities=25%  Similarity=0.440  Sum_probs=184.7

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc----------------CCCCHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV----------------KTIPEEYLA   71 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~----------------~~~~~~~~~   71 (262)
                      +...+++|.+|+.++++++|||||++++++.+++..++|||||++|+|.+++...                ..+++..+.
T Consensus        69 ~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (308)
T 4gt4_A           69 EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV  148 (308)
T ss_dssp             CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHH
Confidence            3455678999999999999999999999999999999999999999999999653                358999999


Q ss_pred             HHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC--CCcccccccccccCcccccCCCCCcc
Q 024828           72 AICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGKYGYK  149 (262)
Q Consensus        72 ~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~  149 (262)
                      .++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++......  .......|++.|+|||++.+..++.+
T Consensus       149 ~i~~qia~gl~yLH~-~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~k  227 (308)
T 4gt4_A          149 HLVAQIAAGMEYLSS-HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID  227 (308)
T ss_dssp             HHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHHHh-CCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCcc
Confidence            999999999999999 999999999999999999999999999997654322  23344578999999999999999999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          150 SDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       150 ~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +||||||+++|||+| |..||.+...       .+....+..+..++.+ ..+|+++.+|+.+||+.||++|||++||++
T Consensus       228 sDVwSfGvvl~El~t~g~~Pf~~~~~-------~~~~~~i~~~~~~~~p-~~~~~~~~~li~~C~~~dP~~RPs~~ei~~  299 (308)
T 4gt4_A          228 SDIWSYGVVLWEVFSYGLQPYCGYSN-------QDVVEMIRNRQVLPCP-DDCPAWVYALMIECWNEFPSRRPRFKDIHS  299 (308)
T ss_dssp             HHHHHHHHHHHHHHTTTCCTTTTCCH-------HHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhhhHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCCCCCc-ccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999998 8999987543       2445556666555444 578999999999999999999999999976


Q ss_pred             C
Q 024828          229 H  229 (262)
Q Consensus       229 h  229 (262)
                      +
T Consensus       300 ~  300 (308)
T 4gt4_A          300 R  300 (308)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 16 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=8.5e-49  Score=343.65  Aligned_cols=217  Identities=28%  Similarity=0.505  Sum_probs=186.3

Q ss_pred             HHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeeC
Q 024828           14 QIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHIIHR   93 (262)
Q Consensus        14 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~   93 (262)
                      ...+++.+++.++|||||+++++|.+.+.+|+||||++||+|.+++.+.+.+++..+..++.||+.||+|||+ .||+||
T Consensus       238 ~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~-~gIiHR  316 (689)
T 3v5w_A          238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN-RFVVYR  316 (689)
T ss_dssp             HHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHT-TTEECC
T ss_pred             HHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccc
Confidence            3345577788889999999999999999999999999999999999999999999999999999999999998 999999


Q ss_pred             CCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 024828           94 DLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGLVLLECATGQFPYSPP  172 (262)
Q Consensus        94 dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~  172 (262)
                      ||||+|||++.+|.++|+|||+|......  ...+.+||+.|+|||++.+ ..++.++|+|||||++|+|++|++||.+.
T Consensus       317 DLKPeNILld~~G~vKL~DFGlA~~~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~  394 (689)
T 3v5w_A          317 DLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH  394 (689)
T ss_dssp             CCSGGGEEECTTSCEEECCCTTCEECSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred             CCchHHeEEeCCCCEEecccceeeecCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999999875432  3456789999999999975 46999999999999999999999999765


Q ss_pred             CccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCC-----HHHHhcCccccccCCcc
Q 024828          173 EQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLS-----AQELMTHPFLKMYGDLN  239 (262)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt-----~~~~l~h~~~~~~~~~~  239 (262)
                      ...+    ..............  .+..+++++.+||.+||+.||++|++     ++|+++||||+...+..
T Consensus       395 ~~~~----~~~i~~~i~~~~~~--~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~  460 (689)
T 3v5w_A          395 KTKD----KHEIDRMTLTMAVE--LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQM  460 (689)
T ss_dssp             GCCC----HHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHH
T ss_pred             ChHH----HHHHHHhhcCCCCC--CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHH
Confidence            4332    22333333333322  23578999999999999999999998     79999999999876543


No 17 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=4.3e-49  Score=326.05  Aligned_cols=214  Identities=29%  Similarity=0.462  Sum_probs=182.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCC-CeeEeeceEEEE-CCeEEEEEeecCCCCHHHHHHhc----------------CCCCHHH
Q 024828            8 EESARRQIAQELKINQSSQC-PYVVVCYQSFYS-NGAISIILEYMDGGSLADFLKKV----------------KTIPEEY   69 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~----------------~~~~~~~   69 (262)
                      .....+++.+|+++|.+++| ||||+++++|.. ++.+++|||||++|+|.+++++.                ..+++..
T Consensus       107 ~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~  186 (353)
T 4ase_A          107 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH  186 (353)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHH
T ss_pred             ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHH
Confidence            45667889999999999965 899999999866 45789999999999999999753                2489999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCCCCC
Q 024828           70 LAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGGKYG  147 (262)
Q Consensus        70 ~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~  147 (262)
                      +..++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+|+.......  ......||+.|+|||++.+..++
T Consensus       187 ~~~~~~qia~gl~yLH~-~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~  265 (353)
T 4ase_A          187 LICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT  265 (353)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHhHhh-CCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCC
Confidence            99999999999999999 9999999999999999999999999999976543322  22345688999999999999999


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHH
Q 024828          148 YKSDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQEL  226 (262)
Q Consensus       148 ~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~  226 (262)
                      .++|||||||++|||+| |+.||.+....+      .....+..+..+..+ ..+++++.+++.+||+.||++|||++++
T Consensus       266 ~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~------~~~~~i~~g~~~~~p-~~~~~~~~~li~~c~~~dP~~RPt~~ei  338 (353)
T 4ase_A          266 IQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMRAP-DYTTPEMYQTMLDCWHGEPSQRPTFSEL  338 (353)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CcccEeehHHHHHHHHhCCCCCCCCCCHHH------HHHHHHHcCCCCCCC-ccCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence            99999999999999998 899998765432      233444445544443 5689999999999999999999999999


Q ss_pred             hcC
Q 024828          227 MTH  229 (262)
Q Consensus       227 l~h  229 (262)
                      ++|
T Consensus       339 l~~  341 (353)
T 4ase_A          339 VEH  341 (353)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            987


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=2.8e-48  Score=340.75  Aligned_cols=221  Identities=24%  Similarity=0.449  Sum_probs=191.1

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .....+.+.+|+++|+.++||||++++++|.+...+|+|||||+||+|.+++.+ .+.+++..+..++.||+.||.|||+
T Consensus       194 ~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~  273 (573)
T 3uto_A          194 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE  273 (573)
T ss_dssp             SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            455677899999999999999999999999999999999999999999999964 4679999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccC--CcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           87 EKHIIHRDLKPSNLLINHR--GEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~--~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                       .||+||||||+||+++.+  +.++|+|||++...... ......+||+.|+|||++.+..++.++||||+||++|+|++
T Consensus       274 -~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~  351 (573)
T 3uto_A          274 -NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS  351 (573)
T ss_dssp             -TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred             -CCeeeccCChhhccccCCCCCCEEEeeccceeEccCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence             999999999999999854  78999999999876432 33445689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQPP--PSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      |.+||.+.+..       +....+.....  +......+++++.+||.+||..||.+|||++|+|+||||+....
T Consensus       352 G~~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          352 GLSPFGGENDD-------ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             SCCSSCCSSHH-------HHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             CCCCCCCcCHH-------HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence            99999875432       33444444432  22233578999999999999999999999999999999987653


No 19 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.3e-46  Score=310.23  Aligned_cols=219  Identities=25%  Similarity=0.473  Sum_probs=191.3

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +....+++.+|+++++.++||||+++++++.+.+..|+||||++|++|.+++...+.+++..+..++.|++.||+|||+ 
T Consensus        54 ~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~-  132 (328)
T 3fe3_A           54 NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ-  132 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            5567788999999999999999999999999999999999999999999999988999999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCC-cchhHHHHHHHHHHHHhCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYG-YKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~~l~~l~~g~  166 (262)
                      .|++|+||||+||+++.++.++|+|||++...... .......|++.|+|||.+.+..+. .++||||+||++|+|++|+
T Consensus       133 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  211 (328)
T 3fe3_A          133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS  211 (328)
T ss_dssp             TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSS
T ss_pred             CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCC
Confidence            99999999999999999999999999998765433 234456789999999999887764 8999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .||.+.+.       ......+..+...  .+..+++++.+|+++||..||.+|||++|+++||||+...+
T Consensus       212 ~pf~~~~~-------~~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          212 LPFDGQNL-------KELRERVLRGKYR--IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             CSSCCSSH-------HHHHHHHHHCCCC--CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             CCCCCCCH-------HHHHHHHHhCCCC--CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence            99987543       2334444444332  23468999999999999999999999999999999987653


No 20 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=4e-46  Score=303.61  Aligned_cols=222  Identities=32%  Similarity=0.610  Sum_probs=191.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ...+.+.+|+.++++++||||+++++++.+++..++||||+.|++|.+++.+ ..++...+..++.|++.||+|||+ .|
T Consensus        59 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~-~~  136 (297)
T 3fxz_A           59 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHS-NQ  136 (297)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence            3456788999999999999999999999999999999999999999999987 468999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      ++|+||+|+||+++.++.++|+|||++..............|++.|+|||.+.+..++.++||||||+++|+|++|+.||
T Consensus       137 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf  216 (297)
T 3fxz_A          137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY  216 (297)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999887665555555668999999999999989999999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      ...+...      ...............+..+++.+.+|+.+||+.||.+|||++++++||||+......
T Consensus       217 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~  280 (297)
T 3fxz_A          217 LNENPLR------ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLS  280 (297)
T ss_dssp             TTSCHHH------HHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGG
T ss_pred             CCCCHHH------HHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCccc
Confidence            7654321      111222223323333457899999999999999999999999999999999776543


No 21 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=4.6e-46  Score=318.14  Aligned_cols=221  Identities=26%  Similarity=0.446  Sum_probs=192.2

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .+....+.+.+|++++++++||||+++++++.+++..++||||+.|++|.+.+...+.+++..+..++.|++.||.|||+
T Consensus        49 ~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~  128 (444)
T 3soa_A           49 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ  128 (444)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35566788999999999999999999999999999999999999999999999998999999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEc---cCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLIN---HRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~---~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  163 (262)
                       .|++|+||||+||+++   .++.++|+|||++..............|++.|+|||++.+..++.++||||+|+++|+|+
T Consensus       129 -~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell  207 (444)
T 3soa_A          129 -MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL  207 (444)
T ss_dssp             -TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             -CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHH
Confidence             9999999999999998   457899999999977655544445568999999999999888999999999999999999


Q ss_pred             hCCCCCCCCCccCchhhHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccccc
Q 024828          164 TGQFPYSPPEQQDGWTSFYELMEAIVDQPPP--SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMY  235 (262)
Q Consensus       164 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~  235 (262)
                      +|..||.+.+..       .....+..+...  ......+++++.+||.+||+.||.+|||++|+|+||||+..
T Consensus       208 ~G~~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          208 VGYPPFWDEDQH-------RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             HSSCSCCCSSHH-------HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             hCCCCCCCccHH-------HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence            999999775432       333333333322  22234789999999999999999999999999999999754


No 22 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=7.3e-46  Score=306.71  Aligned_cols=217  Identities=29%  Similarity=0.549  Sum_probs=190.4

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      .....+.+|+++++.++||||+++++.+.+.+..|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ .|
T Consensus        47 ~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~  125 (337)
T 1o6l_A           47 DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS-RD  125 (337)
T ss_dssp             TCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             hHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            34567889999999999999999999999999999999999999999999988899999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      ++|+||||+||+++.+|.++|+|||++..............|++.|+|||++.+..++.++|+||||+++|+|++|+.||
T Consensus       126 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  205 (337)
T 1o6l_A          126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  205 (337)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCC
Confidence            99999999999999999999999999876544444555678999999999999888999999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCC-----CHHHHhcCccccccC
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRL-----SAQELMTHPFLKMYG  236 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----t~~~~l~h~~~~~~~  236 (262)
                      ...+..       .....+......  .+..+++++.+||.+||+.||++||     +++++++||||+...
T Consensus       206 ~~~~~~-------~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          206 YNQDHE-------RLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             CCSSHH-------HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             CCCCHH-------HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence            875432       233333333222  2356899999999999999999999     999999999998764


No 23 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=2.7e-46  Score=311.16  Aligned_cols=218  Identities=26%  Similarity=0.510  Sum_probs=186.2

Q ss_pred             HHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ....+.+.+|.++++.+ +||||+++++++.+.+..|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ 
T Consensus        64 ~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-  142 (353)
T 3txo_A           64 DDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD-  142 (353)
T ss_dssp             HTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             hhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            34556788999999988 7999999999999999999999999999999999998999999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      .|++|+||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+|||||++|+|++|+.
T Consensus       143 ~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~  222 (353)
T 3txo_A          143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA  222 (353)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCC
Confidence            99999999999999999999999999998765444445556689999999999988889999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCH------HHHhcCccccccC
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSA------QELMTHPFLKMYG  236 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~------~~~l~h~~~~~~~  236 (262)
                      ||...+..       +....+.......  +..+++++.+|+++||+.||.+||++      +++++||||+...
T Consensus       223 Pf~~~~~~-------~~~~~i~~~~~~~--p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~  288 (353)
T 3txo_A          223 PFEAENED-------DLFEAILNDEVVY--PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID  288 (353)
T ss_dssp             SSCCSSHH-------HHHHHHHHCCCCC--CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred             CCCCCCHH-------HHHHHHHcCCCCC--CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence            99875442       3344444443322  34689999999999999999999998      8999999998765


No 24 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.7e-45  Score=307.14  Aligned_cols=217  Identities=28%  Similarity=0.482  Sum_probs=188.1

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ..+.+.+|+.++++++||||+++++++.+....++||||++|++|.+++...+.+++..+..++.|++.||.|||+ .|+
T Consensus        58 ~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~-~gi  136 (361)
T 2yab_A           58 CREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT-KKI  136 (361)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHH-TTE
T ss_pred             HHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCc
Confidence            3567899999999999999999999999999999999999999999999988899999999999999999999999 999


Q ss_pred             eeCCCCCCCEEEccCC----cEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           91 IHRDLKPSNLLINHRG----EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~----~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      +|+||+|+||+++.++    .++|+|||++...... .......|++.|+|||++.+..++.++|+||||+++|+|++|.
T Consensus       137 vHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~  215 (361)
T 2yab_A          137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA  215 (361)
T ss_dssp             ECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCC
Confidence            9999999999998776    7999999999765433 2334557899999999999888999999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSA--PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      .||.+....       +....+........  ....+++++.+||.+||..||.+|||++|+++||||+...
T Consensus       216 ~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          216 SPFLGDTKQ-------ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             CSSCCSSHH-------HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             CCCCCCCHH-------HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence            999875432       33344444332211  1246789999999999999999999999999999998654


No 25 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=2.7e-46  Score=308.23  Aligned_cols=226  Identities=25%  Similarity=0.401  Sum_probs=173.3

Q ss_pred             HHHHHHHHHHHHhcCC-CCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           11 ARRQIAQELKINQSSQ-CPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ....+.+|+.+++.+. ||||+++++++.++...|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ .|
T Consensus        48 ~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~  126 (325)
T 3kn6_A           48 MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD-VG  126 (325)
T ss_dssp             GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            4567789999999996 999999999999999999999999999999999998899999999999999999999998 99


Q ss_pred             eeeCCCCCCCEEEccCC---cEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           90 IIHRDLKPSNLLINHRG---EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      ++|+||+|+||+++.++   .++|+|||++..............++..|+|||.+.+..++.++||||||+++|+|++|+
T Consensus       127 ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  206 (325)
T 3kn6_A          127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ  206 (325)
T ss_dssp             EECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCC
Confidence            99999999999998766   799999999986655444445567899999999999888999999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSAPS--DQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .||.............+....+..+.......  ..+++++.+|+.+||+.||.+|||++++++||||+....
T Consensus       207 ~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          207 VPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             CTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             CCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence            99987665444444556666666555433221  357899999999999999999999999999999987543


No 26 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=2.8e-46  Score=314.77  Aligned_cols=226  Identities=26%  Similarity=0.525  Sum_probs=189.4

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      +....+.+.+|..++.++ +||||+++++++.+.+..|+||||++|++|..++.+.+.+++..+..++.|++.||+|||+
T Consensus        92 ~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~  171 (396)
T 4dc2_A           92 DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE  171 (396)
T ss_dssp             ----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            344556788999999887 8999999999999999999999999999999999998999999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                       .|++|+||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+|||||++|+|++|+
T Consensus       172 -~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~  250 (396)
T 4dc2_A          172 -RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR  250 (396)
T ss_dssp             -TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             -CCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence             9999999999999999999999999999976544555566678999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCc--hhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCH------HHHhcCccccccC
Q 024828          167 FPYSPPEQQDG--WTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSA------QELMTHPFLKMYG  236 (262)
Q Consensus       167 ~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~------~~~l~h~~~~~~~  236 (262)
                      .||......+.  ........+.+......  .+..+++++.+||++||+.||.+||++      +|+++||||+...
T Consensus       251 ~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~  326 (396)
T 4dc2_A          251 SPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  326 (396)
T ss_dssp             CSSTTTTC------CCHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCC
T ss_pred             CCCcccccccccchhhHHHHHHHHhccccC--CCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCC
Confidence            99975432221  11122233333333322  234689999999999999999999984      8999999998765


No 27 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.6e-46  Score=307.90  Aligned_cols=217  Identities=27%  Similarity=0.492  Sum_probs=180.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ...+++.+|++++++++||||+++++++.+.+..++||||++|++|.+++...+.+++..+..++.|++.||+|||+ .|
T Consensus        50 ~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~-~g  128 (347)
T 3zgw_A           50 SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHS-QG  128 (347)
T ss_dssp             --CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            34567899999999999999999999999999999999999999999999988999999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCC-CCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-GQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~~  167 (262)
                      ++|+||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+..+ +.++||||+||++|+|++|..
T Consensus       129 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~  208 (347)
T 3zgw_A          129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFL  208 (347)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBC--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSC
T ss_pred             eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCC
Confidence            9999999999999999999999999987654322 22345578999999999998775 899999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      ||...+.       ......+..+...  .+..+++++.+|+.+||+.||.+|||++|+++||||+...
T Consensus       209 Pf~~~~~-------~~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~~  268 (347)
T 3zgw_A          209 PFDDDNV-------MALYKKIMRGKYD--VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDY  268 (347)
T ss_dssp             SSCCSSH-------HHHHHHHHHTCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTTT
T ss_pred             CCCCCCH-------HHHHHHHHcCCCC--CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcCC
Confidence            9987433       2333444444332  2346899999999999999999999999999999997643


No 28 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=5.9e-46  Score=302.57  Aligned_cols=225  Identities=23%  Similarity=0.319  Sum_probs=169.6

Q ss_pred             cccchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECC----eEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHH
Q 024828            3 IQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNG----AISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVL   78 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~   78 (262)
                      |++..++.......+|+..+.+++||||+++++++.+++    .+|+||||++||+|.+++++ .+++.+.+..++.|++
T Consensus        32 K~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia  110 (303)
T 3hmm_A           32 KIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTA  110 (303)
T ss_dssp             EEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHH
T ss_pred             EEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHH
Confidence            344444444444556777788899999999999998653    58999999999999999976 5689999999999999


Q ss_pred             HHHHHHhhcC--------CeeeCCCCCCCEEEccCCcEEEEecccccccccCCC----CcccccccccccCcccccCC--
Q 024828           79 KGLLYLHHEK--------HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG----QANTFVGTYNYMSPERISGG--  144 (262)
Q Consensus        79 ~~l~~lh~~~--------~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~--  144 (262)
                      .||+|||+ .        +|+||||||+|||++.++.+||+|||++........    ......||+.|+|||++.+.  
T Consensus       111 ~gl~ylH~-~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~  189 (303)
T 3hmm_A          111 SGLAHLHM-EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN  189 (303)
T ss_dssp             HHHHHHHC-CBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSC
T ss_pred             HHHHHHHH-hhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhccccc
Confidence            99999997 5        899999999999999999999999999976644332    22235799999999998764  


Q ss_pred             ----CCCcchhHHHHHHHHHHHHhCCCCCCCCCccC--------chhhHHHHHHHHhcCC-CCCCCCC----CCCHHHHH
Q 024828          145 ----KYGYKSDIWSLGLVLLECATGQFPYSPPEQQD--------GWTSFYELMEAIVDQP-PPSAPSD----QFSPEFCS  207 (262)
Q Consensus       145 ----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~l~~  207 (262)
                          .++.++|||||||++|||+||..||......+        ...........+.... .+..+..    ..++.+.+
T Consensus       190 ~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~  269 (303)
T 3hmm_A          190 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK  269 (303)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHH
T ss_pred             ccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHH
Confidence                36779999999999999999987765432211        0112233333333332 2222211    12346889


Q ss_pred             HHHHhhcCCcCCCCCHHHHhcC
Q 024828          208 FISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       208 li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |+.+||+.||++|||+.++++.
T Consensus       270 li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          270 IMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcccCHhHCcCHHHHHHH
Confidence            9999999999999999999863


No 29 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=1.2e-45  Score=306.61  Aligned_cols=226  Identities=26%  Similarity=0.525  Sum_probs=191.3

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      +....+.+.+|..+++++ +||||+++++++.+....|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+
T Consensus        49 ~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~  128 (345)
T 3a8x_A           49 DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE  128 (345)
T ss_dssp             SHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            456677889999999988 8999999999999999999999999999999999988899999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                       .|++|+||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+|||||++|+|++|+
T Consensus       129 -~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  207 (345)
T 3a8x_A          129 -RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR  207 (345)
T ss_dssp             -TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             -CCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCC
Confidence             9999999999999999999999999999876544444555668999999999999988999999999999999999999


Q ss_pred             CCCCCCCccCc--hhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCH------HHHhcCccccccC
Q 024828          167 FPYSPPEQQDG--WTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSA------QELMTHPFLKMYG  236 (262)
Q Consensus       167 ~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~------~~~l~h~~~~~~~  236 (262)
                      .||......+.  ..........+......  .+..+++++.+||.+||+.||.+||++      +++++||||+...
T Consensus       208 ~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  283 (345)
T 3a8x_A          208 SPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  283 (345)
T ss_dssp             CTTTTTTC-------CHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred             CCcCCcccccccccccHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence            99975332211  01122233333333322  235689999999999999999999985      8999999998765


No 30 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=6.1e-46  Score=310.27  Aligned_cols=224  Identities=28%  Similarity=0.467  Sum_probs=179.3

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +....+.+.+|+.++++++||||+++++++.+.+..++||||+.|++|.+++.+.+.++...+..++.|++.||+|||+ 
T Consensus        56 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~-  134 (361)
T 3uc3_A           56 GAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS-  134 (361)
T ss_dssp             STTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            3344567889999999999999999999999999999999999999999999988899999999999999999999998 


Q ss_pred             CCeeeCCCCCCCEEEccCCc--EEEEecccccccccCCCCcccccccccccCcccccCCCCCcc-hhHHHHHHHHHHHHh
Q 024828           88 KHIIHRDLKPSNLLINHRGE--VKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYK-SDIWSLGLVLLECAT  164 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~--~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~~l~~  164 (262)
                      .|++|+||||+||+++.++.  ++|+|||++...... .......|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       135 ~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~  213 (361)
T 3uc3_A          135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLV  213 (361)
T ss_dssp             TTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHh
Confidence            99999999999999987765  999999998743322 22334578999999999988777655 899999999999999


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      |+.||........+.   .....+............+++++.+||.+||..||.+|||++++++||||....
T Consensus       214 g~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~  282 (361)
T 3uc3_A          214 GAYPFEDPEEPRDYR---KTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNL  282 (361)
T ss_dssp             SSCSCC----CCCHH---HHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred             CCCCCCCCccHHHHH---HHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence            999998766654433   333444444433333446899999999999999999999999999999996543


No 31 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=7.9e-46  Score=303.74  Aligned_cols=222  Identities=27%  Similarity=0.482  Sum_probs=183.9

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +...+.+.+|++++++++||||+++++++.++...++||||+++ +|.+++... ..+++..+..++.|++.||+|||+ 
T Consensus        60 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~-  137 (311)
T 3niz_A           60 EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ-  137 (311)
T ss_dssp             -CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            33457889999999999999999999999999999999999976 888888765 459999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHHHHHHHHhCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      .|++|+||||+||+++.++.++|+|||++..............++..|+|||.+.+ ..++.++||||||+++|+|++|+
T Consensus       138 ~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~  217 (311)
T 3niz_A          138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK  217 (311)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999876555445555678999999999876 45899999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCC-------------------------CCCCCCHHHHHHHHHhhcCCcCCCC
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSA-------------------------PSDQFSPEFCSFISACVQKEPQQRL  221 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~li~~~l~~~p~~Rp  221 (262)
                      .||......+....+...   . ....+..                         ....+++++.+||.+||+.||++||
T Consensus       218 ~pf~~~~~~~~~~~i~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  293 (311)
T 3niz_A          218 PLFPGVTDDDQLPKIFSI---L-GTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI  293 (311)
T ss_dssp             CSCCCSSTTTHHHHHHHH---H-CCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSC
T ss_pred             CCCCCCChHHHHHHHHHH---H-CCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCC
Confidence            999876665433222221   1 1111100                         0134678999999999999999999


Q ss_pred             CHHHHhcCccccccC
Q 024828          222 SAQELMTHPFLKMYG  236 (262)
Q Consensus       222 t~~~~l~h~~~~~~~  236 (262)
                      |++|+++||||+...
T Consensus       294 t~~ell~hp~f~~~~  308 (311)
T 3niz_A          294 SARDAMNHPYFKDLD  308 (311)
T ss_dssp             CHHHHHTSGGGTTSC
T ss_pred             CHHHHhcCcccccCC
Confidence            999999999999865


No 32 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=1.5e-45  Score=305.70  Aligned_cols=216  Identities=26%  Similarity=0.506  Sum_probs=189.3

Q ss_pred             HHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           11 ARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ..+.+.+|.+++..+ +||||+++++++.+.+..|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ .|
T Consensus        60 ~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~  138 (345)
T 1xjd_A           60 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS-KG  138 (345)
T ss_dssp             CHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             hHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            456778899999877 9999999999999999999999999999999999988899999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      ++|+||||+||+++.+|.++|+|||++..............|++.|+|||++.+..++.++|+|||||++|+|++|..||
T Consensus       139 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  218 (345)
T 1xjd_A          139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF  218 (345)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999999876544444455678999999999999988999999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHH-HHhcCccccccC
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQ-ELMTHPFLKMYG  236 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~-~~l~h~~~~~~~  236 (262)
                      ...+..       .....+......  .+..+++++.+||.+||..||++||++. ++++||||+...
T Consensus       219 ~~~~~~-------~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          219 HGQDEE-------ELFHSIRMDNPF--YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             CCSSHH-------HHHHHHHHCCCC--CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             CCCCHH-------HHHHHHHhCCCC--CCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence            875432       233333333322  2346899999999999999999999998 999999998775


No 33 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=5.4e-45  Score=296.19  Aligned_cols=225  Identities=24%  Similarity=0.423  Sum_probs=181.9

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ++...+.+.+|++++++++||||+++++++.+++..++||||+++ ++.+.+.. .+.+++..+..++.|++.||+|||+
T Consensus        41 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~  119 (292)
T 3o0g_A           41 DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS  119 (292)
T ss_dssp             STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            445567888999999999999999999999999999999999987 66665544 5789999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCC-CCcchhHHHHHHHHHHHHhC
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGK-YGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g  165 (262)
                       .|++|+||||+||+++.++.++|+|||++..............++..|+|||.+.+.. ++.++||||+|+++++|++|
T Consensus       120 -~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~  198 (292)
T 3o0g_A          120 -RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA  198 (292)
T ss_dssp             -TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTT
T ss_pred             -CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHc
Confidence             9999999999999999999999999999987665555555667899999999998766 79999999999999999988


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCCC-----------------------CCCCCCCCCHHHHHHHHHhhcCCcCCCCC
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQPP-----------------------PSAPSDQFSPEFCSFISACVQKEPQQRLS  222 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  222 (262)
                      ..||.......  ...............                       .......+++++.+|+.+||+.||++|||
T Consensus       199 ~~p~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  276 (292)
T 3o0g_A          199 GRPLFPGNDVD--DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS  276 (292)
T ss_dssp             SCCSCCCSSHH--HHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCCCcCCCCHH--HHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCC
Confidence            77754433221  111111111111000                       00111247889999999999999999999


Q ss_pred             HHHHhcCccccccC
Q 024828          223 AQELMTHPFLKMYG  236 (262)
Q Consensus       223 ~~~~l~h~~~~~~~  236 (262)
                      ++|+++||||+.+.
T Consensus       277 ~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          277 AEEALQHPYFSDFC  290 (292)
T ss_dssp             HHHHHTSGGGTTC-
T ss_pred             HHHHhcCcccccCC
Confidence            99999999999764


No 34 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.4e-46  Score=304.49  Aligned_cols=223  Identities=22%  Similarity=0.382  Sum_probs=189.2

Q ss_pred             cchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 024828            5 MNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLY   83 (262)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~   83 (262)
                      +.........+.+|+.+++.++||||+++++++.+.+..++||||++|++|.+++...+ .+++..+..++.|++.||.|
T Consensus        38 ~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~  117 (321)
T 1tki_A           38 VKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF  117 (321)
T ss_dssp             ECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             EecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence            33445566788999999999999999999999999999999999999999999997654 79999999999999999999


Q ss_pred             HhhcCCeeeCCCCCCCEEEcc--CCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHH
Q 024828           84 LHHEKHIIHRDLKPSNLLINH--RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        84 lh~~~~i~H~dl~p~nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  161 (262)
                      ||+ .|++|+||+|+||+++.  ++.++|+|||++...... .......+++.|+|||.+.+..++.++|+||||+++|+
T Consensus       118 lH~-~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  195 (321)
T 1tki_A          118 LHS-HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYV  195 (321)
T ss_dssp             HHH-TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHH
T ss_pred             HHH-CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHH
Confidence            999 99999999999999987  789999999998765432 22334568999999999998888999999999999999


Q ss_pred             HHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          162 CATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSA--PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       162 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      |++|..||......       .....+........  ....+++++.+|+.+||..||.+|||+.|+++||||+...
T Consensus       196 ll~g~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          196 LLSGINPFLAETNQ-------QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             HHHSSCTTCCSSHH-------HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             HHhCCCCCcCCCHH-------HHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence            99999999875432       33334433332221  1246889999999999999999999999999999998653


No 35 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=4e-45  Score=305.38  Aligned_cols=219  Identities=25%  Similarity=0.431  Sum_probs=187.8

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +....+.+.+|++++++++||||+++++++.+++..|+||||+.|++|.+++...+.+++..+..++.|++.||.|||+ 
T Consensus        68 ~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~-  146 (362)
T 2bdw_A           68 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS-  146 (362)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            4566778999999999999999999999999999999999999999999999988889999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCC---cEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           88 KHIIHRDLKPSNLLINHRG---EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                      .|++|+||+|+||+++.++   .++|+|||++....... ......|++.|+|||++.+..++.++|||||||++|+|++
T Consensus       147 ~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  225 (362)
T 2bdw_A          147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV  225 (362)
T ss_dssp             TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHH
Confidence            9999999999999997654   59999999987655332 3334578999999999998889999999999999999999


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCCCCC--CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccccc
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQPPPS--APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMY  235 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~  235 (262)
                      |..||...+..       .....+..+....  .....+++++.+||.+||..||.+|||++++++||||+..
T Consensus       226 g~~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          226 GYPPFWDEDQH-------RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             SSCSSCCSSHH-------HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             CCCCCCCCCHH-------HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence            99999875432       2333333333221  1224678999999999999999999999999999999753


No 36 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=2.6e-45  Score=302.68  Aligned_cols=218  Identities=28%  Similarity=0.476  Sum_probs=178.7

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ......+.+|++++++++||||+++++++.+++..|+||||++|++|.+++.+.+.++...+..++.|++.||.|||+ .
T Consensus        62 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~-~  140 (327)
T 3a62_A           62 AKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ-K  140 (327)
T ss_dssp             ---------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             hhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-C
Confidence            345567889999999999999999999999999999999999999999999988899999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFP  168 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  168 (262)
                      |++|+||+|+||+++.++.++|+|||++..............|++.|+|||.+.+..++.++|+||||+++|+|++|+.|
T Consensus       141 ~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  220 (327)
T 3a62_A          141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP  220 (327)
T ss_dssp             TCCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCC
Confidence            99999999999999999999999999987654444444556789999999999988899999999999999999999999


Q ss_pred             CCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCC-----CHHHHhcCccccccC
Q 024828          169 YSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRL-----SAQELMTHPFLKMYG  236 (262)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----t~~~~l~h~~~~~~~  236 (262)
                      |......       .....+......  .+..+++++.+|+.+||..||.+||     +++++++||||+...
T Consensus       221 f~~~~~~-------~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~  284 (327)
T 3a62_A          221 FTGENRK-------KTIDKILKCKLN--LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN  284 (327)
T ss_dssp             CCCSSHH-------HHHHHHHHTCCC--CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCC
T ss_pred             CCCCCHH-------HHHHHHHhCCCC--CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCC
Confidence            9875432       223333333222  2246889999999999999999999     899999999998764


No 37 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=4.5e-45  Score=303.71  Aligned_cols=217  Identities=26%  Similarity=0.482  Sum_probs=189.7

Q ss_pred             HHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           10 SARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ...+.+.+|.+++..+ +||+|+++++++.+.+..|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ .
T Consensus        62 ~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-~  140 (353)
T 2i0e_A           62 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS-K  140 (353)
T ss_dssp             TCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence            3456788999999988 8999999999999999999999999999999999988899999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFP  168 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  168 (262)
                      |++|+||||+||+++.+|.++|+|||++..............|++.|+|||++.+..++.++|+||||+++|+|++|+.|
T Consensus       141 givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~P  220 (353)
T 2i0e_A          141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP  220 (353)
T ss_dssp             TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCC
Confidence            99999999999999999999999999987654444455567899999999999988899999999999999999999999


Q ss_pred             CCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCC-----CHHHHhcCccccccC
Q 024828          169 YSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRL-----SAQELMTHPFLKMYG  236 (262)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----t~~~~l~h~~~~~~~  236 (262)
                      |...+..       +....+......  .+..+++++.+||.+||..||.+||     +++++++||||+...
T Consensus       221 f~~~~~~-------~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~  284 (353)
T 2i0e_A          221 FEGEDED-------ELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  284 (353)
T ss_dssp             SCCSSHH-------HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCC
T ss_pred             CCCCCHH-------HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCC
Confidence            9875432       333444433322  2357899999999999999999999     479999999998754


No 38 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=2.5e-45  Score=305.34  Aligned_cols=234  Identities=25%  Similarity=0.409  Sum_probs=179.3

Q ss_pred             ccccchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 024828            2 VIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l   81 (262)
                      ++|+.......+.+.+|++++++++||||+++++++.+....++||||++|++|.+++...+.++...+..++.|++.||
T Consensus        82 avK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L  161 (349)
T 2w4o_A           82 ALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAV  161 (349)
T ss_dssp             EEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHH
T ss_pred             EEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            33444444566788899999999999999999999999999999999999999999999888899999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEcc---CCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHH
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINH---RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLV  158 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~  158 (262)
                      .|||+ .|++|+||+|+||+++.   ++.++|+|||++....... ......|++.|+|||.+.+..++.++|||||||+
T Consensus       162 ~~LH~-~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  239 (349)
T 2w4o_A          162 AYLHE-NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGII  239 (349)
T ss_dssp             HHHHH-TTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------------CGGGSCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             HHHHH-CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHH
Confidence            99998 99999999999999975   7899999999987654322 2234568999999999998889999999999999


Q ss_pred             HHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCC--CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          159 LLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPS--APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       159 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      +|+|++|..||.......      .....+.......  .....++.++.+|+.+||..||++|||+.++++||||+...
T Consensus       240 l~ell~g~~pf~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          240 TYILLCGFEPFYDERGDQ------FMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             HHHHHHSSCTTCCTTCHH------HHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             HHHHHhCCCCCCCCcccH------HHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            999999999997654321      2233333333222  22256899999999999999999999999999999999877


Q ss_pred             Ccccchh
Q 024828          237 DLNVDLS  243 (262)
Q Consensus       237 ~~~~~~~  243 (262)
                      .......
T Consensus       314 ~~~~~~~  320 (349)
T 2w4o_A          314 ANFVHMD  320 (349)
T ss_dssp             CCCSCCH
T ss_pred             cchhhhc
Confidence            6554433


No 39 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.1e-44  Score=305.73  Aligned_cols=231  Identities=26%  Similarity=0.419  Sum_probs=183.3

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      +....+.+.+|++++++++||||+++++++.+++..++||||+++++|.+++...  +.+++..+..++.|++.||+|||
T Consensus        66 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH  145 (389)
T 3gni_B           66 SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH  145 (389)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            4567788999999999999999999999999999999999999999999999876  67999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC-------CCcccccccccccCcccccC--CCCCcchhHHHHH
Q 024828           86 HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-------GQANTFVGTYNYMSPERISG--GKYGYKSDIWSLG  156 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG  156 (262)
                      + .|++|+||||+||+++.++.++|+|||.+.......       .......++..|+|||.+.+  ..++.++||||||
T Consensus       146 ~-~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG  224 (389)
T 3gni_B          146 H-MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG  224 (389)
T ss_dssp             H-TTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHH
T ss_pred             h-CCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHH
Confidence            9 999999999999999999999999999876543221       12223468889999999987  5689999999999


Q ss_pred             HHHHHHHhCCCCCCCCCccCchhhHHHHH-HHHh------------------------------------cCCCCCCCCC
Q 024828          157 LVLLECATGQFPYSPPEQQDGWTSFYELM-EAIV------------------------------------DQPPPSAPSD  199 (262)
Q Consensus       157 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~------------------------------------~~~~~~~~~~  199 (262)
                      |++|+|++|+.||.+....+......... ....                                    ..........
T Consensus       225 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (389)
T 3gni_B          225 ITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHR  304 (389)
T ss_dssp             HHHHHHHHSSCTTTTCCSTTHHHHC-------------------------------------------------------
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCcccc
Confidence            99999999999998755443211110000 0000                                    0000011234


Q ss_pred             CCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          200 QFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       200 ~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      .+++++.+||.+||+.||++|||++|+|+||||+......
T Consensus       305 ~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  344 (389)
T 3gni_B          305 TFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRA  344 (389)
T ss_dssp             -CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC---C
T ss_pred             ccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhhcc
Confidence            5789999999999999999999999999999999877543


No 40 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=9.8e-45  Score=297.85  Aligned_cols=213  Identities=28%  Similarity=0.518  Sum_probs=187.3

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ..+.+.+|..+++.++||||+++++++.+....|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ .|+
T Consensus        49 ~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~i  127 (318)
T 1fot_A           49 QVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS-KDI  127 (318)
T ss_dssp             CHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHT-TTE
T ss_pred             HHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCc
Confidence            3567889999999999999999999999999999999999999999999998899999999999999999999998 999


Q ss_pred             eeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 024828           91 IHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYS  170 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  170 (262)
                      +|+||+|+||+++.+|.++|+|||++.....   ......|++.|+|||++.+..++.++|+||||+++|+|++|..||.
T Consensus       128 vHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  204 (318)
T 1fot_A          128 IYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY  204 (318)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCSSCEECSS---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cccCCChheEEEcCCCCEEEeecCcceecCC---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence            9999999999999999999999999876432   2345578999999999998889999999999999999999999998


Q ss_pred             CCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCC-----CHHHHhcCccccccC
Q 024828          171 PPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRL-----SAQELMTHPFLKMYG  236 (262)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----t~~~~l~h~~~~~~~  236 (262)
                      ..+..       .....+......  .+..+++++.+++.+||..||.+||     +++++++||||+...
T Consensus       205 ~~~~~-------~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~  266 (318)
T 1fot_A          205 DSNTM-------KTYEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV  266 (318)
T ss_dssp             CSSHH-------HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             CCCHH-------HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence            75432       233333333322  2346899999999999999999999     999999999998765


No 41 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=2.8e-44  Score=295.76  Aligned_cols=221  Identities=35%  Similarity=0.643  Sum_probs=189.5

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ...+.+.+|+.++++++||||+++++++..++..++||||++|++|.+++.+ ..+++..+..++.|++.||+|||+ .|
T Consensus        84 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~-~~  161 (321)
T 2c30_A           84 QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHA-QG  161 (321)
T ss_dssp             CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            3456788999999999999999999999999999999999999999999875 579999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      ++|+||+|+||+++.++.++|+|||++..............|++.|+|||.+.+..++.++||||||+++|+|++|+.||
T Consensus       162 ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf  241 (321)
T 2c30_A          162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY  241 (321)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999877655444445567899999999999888999999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCCCC-CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPPPS-APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      ......       .....+.....+. .....+++++.+++.+||+.||++|||++++++||||+......
T Consensus       242 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~~~  305 (321)
T 2c30_A          242 FSDSPV-------QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPE  305 (321)
T ss_dssp             TTSCHH-------HHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCCGG
T ss_pred             CCCCHH-------HHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCCCcc
Confidence            765432       2223333333222 22345789999999999999999999999999999998765433


No 42 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=2.5e-45  Score=305.56  Aligned_cols=217  Identities=27%  Similarity=0.485  Sum_probs=184.6

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhh
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV----KTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~----~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ..+.+.+|+++++.++||||+++++++.+++..|+||||++|++|.+++.+.    ..+++..+..++.|++.||+|||+
T Consensus        69 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~  148 (351)
T 3c0i_A           69 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD  148 (351)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999999999999888643    258999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCc---EEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLINHRGE---VKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~---~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  163 (262)
                       .|++|+||||+||+++.++.   ++|+|||++..............|++.|+|||++.+..++.++|||||||++|+|+
T Consensus       149 -~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  227 (351)
T 3c0i_A          149 -NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL  227 (351)
T ss_dssp             -TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             -CCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHH
Confidence             99999999999999986654   99999999987655444444567999999999999888999999999999999999


Q ss_pred             hCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          164 TGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAP--SDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       164 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      +|..||.....        .....+..+......  ...+++++.+||.+||..||++|||+.++++||||+...
T Consensus       228 ~g~~pf~~~~~--------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~  294 (351)
T 3c0i_A          228 SGCLPFYGTKE--------RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERD  294 (351)
T ss_dssp             HSSCSSCSSHH--------HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHH
T ss_pred             HCCCCCCCcHH--------HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCc
Confidence            99999986421        223333333322211  146789999999999999999999999999999998643


No 43 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.3e-45  Score=299.20  Aligned_cols=215  Identities=28%  Similarity=0.495  Sum_probs=181.2

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEE--CCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYS--NGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ..+++.+|++++++++||||+++++++.+  +...++||||+++++|.+++. .+++++..+..++.|++.||+|||+ .
T Consensus        79 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~-~  156 (298)
T 2zv2_A           79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHY-Q  156 (298)
T ss_dssp             --CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             hHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence            34678999999999999999999999987  568999999999999988654 3679999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCC---CCcchhHHHHHHHHHHHHhC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGK---YGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---~~~~~Di~slG~~l~~l~~g  165 (262)
                      |++|+||+|+||+++.++.++|+|||++..............+++.|+|||.+.+..   .+.++|+||||+++|+|++|
T Consensus       157 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g  236 (298)
T 2zv2_A          157 KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG  236 (298)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHS
T ss_pred             CeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHC
Confidence            999999999999999999999999999987654433344567899999999998755   37889999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      +.||.....       ......+............+++++.+|+.+||+.||++|||++|+++||||++
T Consensus       237 ~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          237 QCPFMDERI-------MCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             SCSSCCSSH-------HHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             CCCCCCccH-------HHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence            999976432       22333333333333334578999999999999999999999999999999963


No 44 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.1e-44  Score=298.72  Aligned_cols=217  Identities=28%  Similarity=0.497  Sum_probs=186.3

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      .++.+.+|+.++++++||||+++++++.+....++||||++|++|.+++...+.+++..+..++.|++.||.|||+ .|+
T Consensus        57 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~-~~i  135 (326)
T 2y0a_A           57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQI  135 (326)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHH-TTE
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH-CCe
Confidence            3678899999999999999999999999999999999999999999999988889999999999999999999998 999


Q ss_pred             eeCCCCCCCEEEccCC----cEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           91 IHRDLKPSNLLINHRG----EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~----~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      +|+||+|+||+++.++    .++|+|||++....... ......+++.|+|||.+.+..++.++|+||||+++|+|++|.
T Consensus       136 vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  214 (326)
T 2y0a_A          136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA  214 (326)
T ss_dssp             ECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred             EcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCc
Confidence            9999999999998877    79999999987654332 333457899999999999888999999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPP--SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      .||......       +....+......  ......+++++.+|+.+||..||.+|||++++++||||+...
T Consensus       215 ~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          215 SPFLGDTKQ-------ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             CSSCCSSHH-------HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             CCCCCCCHH-------HHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            999765432       222222222211  111246789999999999999999999999999999998654


No 45 
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=3.4e-45  Score=305.79  Aligned_cols=237  Identities=46%  Similarity=0.840  Sum_probs=202.1

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +....+.+.+|++++++++||||+++++++.+++..++||||++|++|.+++.+.+.++...+..++.|++.||+|||+.
T Consensus        71 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~  150 (360)
T 3eqc_A           71 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK  150 (360)
T ss_dssp             CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            56777899999999999999999999999999999999999999999999999988999999999999999999999982


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      .|++|+||+|+||+++.++.++|+|||++......  ......++..|+|||++.+..++.++||||||+++|+|++|+.
T Consensus       151 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  228 (360)
T 3eqc_A          151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY  228 (360)
T ss_dssp             HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSC
T ss_pred             CCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            38999999999999999999999999998655332  2234578999999999999889999999999999999999999


Q ss_pred             CCCCCCccCc-----------------------------------hhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHh
Q 024828          168 PYSPPEQQDG-----------------------------------WTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISAC  212 (262)
Q Consensus       168 p~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  212 (262)
                      ||......+.                                   .....+....+.....+..+...++.++.+||.+|
T Consensus       229 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  308 (360)
T 3eqc_A          229 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC  308 (360)
T ss_dssp             CSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHH
Confidence            9976443210                                   01123444555555556666667899999999999


Q ss_pred             hcCCcCCCCCHHHHhcCccccccCCcccchhhHh
Q 024828          213 VQKEPQQRLSAQELMTHPFLKMYGDLNVDLSEYF  246 (262)
Q Consensus       213 l~~~p~~Rpt~~~~l~h~~~~~~~~~~~~~~~~~  246 (262)
                      |+.||++|||++++++||||+........+....
T Consensus       309 L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~~~~~  342 (360)
T 3eqc_A          309 LIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWL  342 (360)
T ss_dssp             HCSSTTTSCCHHHHHTSHHHHHHHHSCCCHHHHH
T ss_pred             hhcChhhCCCHHHHhhChHhhcchHhhhhHHHHH
Confidence            9999999999999999999999888888776655


No 46 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=1.7e-44  Score=300.10  Aligned_cols=214  Identities=26%  Similarity=0.460  Sum_probs=188.7

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ..+.+.+|+++++.++||||+++++++.++...|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ .|+
T Consensus        84 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~i  162 (350)
T 1rdq_E           84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDL  162 (350)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-TTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCc
Confidence            4567889999999999999999999999999999999999999999999998899999999999999999999998 999


Q ss_pred             eeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 024828           91 IHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYS  170 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  170 (262)
                      +|+||||+||+++.++.++|+|||++.....   ......|++.|+|||++.+..++.++|+|||||++|+|++|..||.
T Consensus       163 vHrDlkp~NIll~~~g~~kL~DFg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  239 (350)
T 1rdq_E          163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF  239 (350)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECSS---CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccccCccceEEECCCCCEEEcccccceeccC---CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCC
Confidence            9999999999999999999999999976543   2345578999999999998889999999999999999999999998


Q ss_pred             CCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCC-----HHHHhcCccccccCC
Q 024828          171 PPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLS-----AQELMTHPFLKMYGD  237 (262)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt-----~~~~l~h~~~~~~~~  237 (262)
                      ..+..       .....+..+...  .+..+++++.+||.+||+.||.+||+     ++++++||||+....
T Consensus       240 ~~~~~-------~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w  302 (350)
T 1rdq_E          240 ADQPI-------QIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             CSSHH-------HHHHHHHHCCCC--CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             CCCHH-------HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCH
Confidence            75432       333444444322  23568999999999999999999998     999999999987653


No 47 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=6.3e-45  Score=300.88  Aligned_cols=212  Identities=30%  Similarity=0.525  Sum_probs=182.9

Q ss_pred             HHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCee
Q 024828           12 RRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHII   91 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~   91 (262)
                      ..++.+|+++++.++||||+++++++.+.+..++||||+ +++|.+++.+.+.+++..+..++.|++.||.|||+ .|++
T Consensus        53 ~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~-~giv  130 (336)
T 3h4j_B           53 HMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR-HKIV  130 (336)
T ss_dssp             SHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH-HTCC
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeE
Confidence            457899999999999999999999999999999999999 66999999988999999999999999999999999 9999


Q ss_pred             eCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCC
Q 024828           92 HRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECATGQFPYS  170 (262)
Q Consensus        92 H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~  170 (262)
                      |+||+|+||+++.++.++|+|||++...... .......|++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||.
T Consensus       131 H~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~  209 (336)
T 3h4j_B          131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD  209 (336)
T ss_dssp             CCCCSTTTEEECTTCCEEECCSSCTBTTTTS-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSB
T ss_pred             ecCCchhhEEEcCCCCEEEEEeccceeccCC-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999999998765433 23345578999999999998775 789999999999999999999998


Q ss_pred             CCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccccc
Q 024828          171 PPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMY  235 (262)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~  235 (262)
                      ..........       +..  .....+..+++++.+|+.+||..||.+|||++|+++||||+..
T Consensus       210 ~~~~~~~~~~-------i~~--~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          210 DEFIPNLFKK-------VNS--CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             CSSSTTCBCC-------CCS--SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             CccHHHHHHH-------HHc--CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence            7544332111       111  1122335689999999999999999999999999999999753


No 48 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=1.5e-44  Score=296.92  Aligned_cols=224  Identities=25%  Similarity=0.477  Sum_probs=184.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHH
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV------KTIPEEYLAAICEQVLKGLLY   83 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~------~~~~~~~~~~i~~~l~~~l~~   83 (262)
                      ...+.+.+|++++++++||||+++++++.+++..++||||++| +|.+++...      ..++...+..++.|++.||.|
T Consensus        45 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~  123 (317)
T 2pmi_A           45 GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF  123 (317)
T ss_dssp             CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHH
Confidence            3446788999999999999999999999999999999999975 999999754      358999999999999999999


Q ss_pred             HhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCC-CCCcchhHHHHHHHHHHH
Q 024828           84 LHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGG-KYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        84 lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l  162 (262)
                      ||+ .|++|+||||+||+++.++.++|+|||++..............++..|+|||++.+. .++.++|||||||++|+|
T Consensus       124 lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  202 (317)
T 2pmi_A          124 CHE-NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEM  202 (317)
T ss_dssp             HHH-TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred             HHH-CCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHH
Confidence            999 999999999999999999999999999998765444444456789999999999864 589999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCC----------------------------CCCCCCCCCHHHHHHHHHhhc
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPP----------------------------PSAPSDQFSPEFCSFISACVQ  214 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~l~~li~~~l~  214 (262)
                      ++|+.||......+....+.   ........                            .......+++++.+|+.+||+
T Consensus       203 ~~g~~pf~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  279 (317)
T 2pmi_A          203 ITGKPLFPGTNDEEQLKLIF---DIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQ  279 (317)
T ss_dssp             HHSSCSCCCSSHHHHHHHHH---HHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSC
T ss_pred             HhCCCCCCCCChHHHHHHHH---HHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCC
Confidence            99999998765432221111   11110000                            000112578899999999999


Q ss_pred             CCcCCCCCHHHHhcCccccccCCc
Q 024828          215 KEPQQRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       215 ~~p~~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      .||++|||++|+++||||+.+...
T Consensus       280 ~dP~~Rpt~~e~l~hp~f~~~~~~  303 (317)
T 2pmi_A          280 LNPDMRLSAKQALHHPWFAEYYHH  303 (317)
T ss_dssp             SSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred             CCcccCCCHHHHhCChhhhcccch
Confidence            999999999999999999987654


No 49 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=6.2e-45  Score=295.33  Aligned_cols=221  Identities=24%  Similarity=0.423  Sum_probs=178.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ...+.+.+|++++++++||||+++++++.+.+..++|||++.+ +|.+++... +.++...+..++.|++.||+|||+ .
T Consensus        42 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~  119 (288)
T 1ob3_A           42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD-R  119 (288)
T ss_dssp             CCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             ccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence            3446788999999999999999999999999999999999976 999999865 679999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGG-KYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      |++|+||+|+||+++.++.++|+|||++..............+++.|+|||.+.+. .++.++|+||||+++|+|++|+.
T Consensus       120 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~  199 (288)
T 1ob3_A          120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP  199 (288)
T ss_dssp             TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999987765444444455789999999999764 48999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCC-----------------------CCCCCCCCHHHHHHHHHhhcCCcCCCCCHH
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPP-----------------------SAPSDQFSPEFCSFISACVQKEPQQRLSAQ  224 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  224 (262)
                      ||......+..   .............                       ......+++++.+|+.+||+.||++|||++
T Consensus       200 pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  276 (288)
T 1ob3_A          200 LFPGVSEADQL---MRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAK  276 (288)
T ss_dssp             SCCCSSHHHHH---HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             CCCCCCHHHHH---HHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHH
Confidence            99876543221   1111111111000                       001235789999999999999999999999


Q ss_pred             HHhcCcccccc
Q 024828          225 ELMTHPFLKMY  235 (262)
Q Consensus       225 ~~l~h~~~~~~  235 (262)
                      |+++||||+..
T Consensus       277 e~l~hp~f~~~  287 (288)
T 1ob3_A          277 QALEHAYFKEN  287 (288)
T ss_dssp             HHHTSGGGGC-
T ss_pred             HHhcCcchhhc
Confidence            99999999864


No 50 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=2.5e-45  Score=302.26  Aligned_cols=222  Identities=24%  Similarity=0.436  Sum_probs=185.7

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ....+.+.+|+.+++.++||||+++++++.+++..++||||++|++|.+++...+.+++..+..++.|++.||+|||+ .
T Consensus        46 ~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~-~  124 (323)
T 3tki_A           46 VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-I  124 (323)
T ss_dssp             -----CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence            344577899999999999999999999999999999999999999999999888889999999999999999999998 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCC--CCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHHhC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g  165 (262)
                      |++|+||+|+||+++.++.++|+|||++.......  .......|++.|+|||++.+..+ +.++||||||+++|+|++|
T Consensus       125 givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g  204 (323)
T 3tki_A          125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG  204 (323)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHS
T ss_pred             CccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhC
Confidence            99999999999999999999999999997553222  22334578999999999987765 7789999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      +.||........      .................+++++.+|+.+||..||.+|||++|+++||||+....
T Consensus       205 ~~pf~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          205 ELPWDQPSDSCQ------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             SCSCSSSCTTSH------HHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             CCCCCCCchHHH------HHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccccc
Confidence            999987554321      122222333333333568999999999999999999999999999999986543


No 51 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=2.3e-45  Score=307.89  Aligned_cols=240  Identities=24%  Similarity=0.378  Sum_probs=190.1

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ....+.+.+|++++++++||||+++++++.+.+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+ 
T Consensus       127 ~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~-  205 (373)
T 2x4f_A          127 MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ-  205 (373)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            356678999999999999999999999999999999999999999999988654 469999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEE--ccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhC
Q 024828           88 KHIIHRDLKPSNLLI--NHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        88 ~~i~H~dl~p~nil~--~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g  165 (262)
                      .|++|+||+|+||++  +.++.++|+|||++....... ......|++.|+|||++.+..++.++|||||||++|+|++|
T Consensus       206 ~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  284 (373)
T 2x4f_A          206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG  284 (373)
T ss_dssp             TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHS
T ss_pred             CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhC
Confidence            999999999999999  456789999999998654332 23345689999999999988899999999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcccchh
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQPP--PSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLNVDLS  243 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~~~~~  243 (262)
                      ..||......       +....+.....  +......+++++.+||.+||+.||.+|||++|+++||||+..........
T Consensus       285 ~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~~~~~~~~  357 (373)
T 2x4f_A          285 LSPFLGDNDA-------ETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSA  357 (373)
T ss_dssp             SCTTCCSSHH-------HHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHHHHHHHHH
T ss_pred             CCCCCCCCHH-------HHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCchhhhhhh
Confidence            9999875443       22233322222  12222468999999999999999999999999999999998765544444


Q ss_pred             hHhhhhCCCCcccC
Q 024828          244 EYFTDAGSPLATLS  257 (262)
Q Consensus       244 ~~~~~~~~~~~~~~  257 (262)
                      ...++.+++.+++.
T Consensus       358 ~~~~~~~~~~~d~~  371 (373)
T 2x4f_A          358 QKKKNRGSDAQDFV  371 (373)
T ss_dssp             C-------------
T ss_pred             hhccCCccchhhhh
Confidence            44566666666553


No 52 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=9.6e-45  Score=297.16  Aligned_cols=232  Identities=23%  Similarity=0.445  Sum_probs=182.8

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .+....+.+.+|++++++++||||+++++++.+++..++||||+++++|.+++...+.++...+..++.|++.||+|||+
T Consensus        41 ~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~  120 (311)
T 4agu_A           41 DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK  120 (311)
T ss_dssp             C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34566788899999999999999999999999999999999999999999999888889999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHHHHHHHHhC
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g  165 (262)
                       .|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+ ..++.++|+||||+++++|++|
T Consensus       121 -~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  199 (311)
T 4agu_A          121 -HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG  199 (311)
T ss_dssp             -TTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHS
T ss_pred             -CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhC
Confidence             99999999999999999999999999999876544444455678999999999976 4579999999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHHH--------HH-----hcCCCCCCC---------CCCCCHHHHHHHHHhhcCCcCCCCCH
Q 024828          166 QFPYSPPEQQDGWTSFYELME--------AI-----VDQPPPSAP---------SDQFSPEFCSFISACVQKEPQQRLSA  223 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~--------~~-----~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~  223 (262)
                      +.||......+..........        ..     ........+         ...+++++.+|+.+||+.||.+|||+
T Consensus       200 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  279 (311)
T 4agu_A          200 VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTC  279 (311)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCH
T ss_pred             CCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCH
Confidence            999987655432211111100        00     000000000         13578889999999999999999999


Q ss_pred             HHHhcCccccccCCcc
Q 024828          224 QELMTHPFLKMYGDLN  239 (262)
Q Consensus       224 ~~~l~h~~~~~~~~~~  239 (262)
                      +|+++||||+...+..
T Consensus       280 ~ell~hp~f~~~~~~~  295 (311)
T 4agu_A          280 EQLLHHPYFENIREIE  295 (311)
T ss_dssp             HHHHTSGGGTTCC---
T ss_pred             HHHhcChHHHhccCHH
Confidence            9999999999887654


No 53 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=7.8e-45  Score=311.75  Aligned_cols=220  Identities=30%  Similarity=0.534  Sum_probs=180.3

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ......+.+|+++++.++||||+++++++.+++..|+||||++|++|.+++.+.+.++...+..++.|++.||+|||++.
T Consensus       189 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  268 (446)
T 4ejn_A          189 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK  268 (446)
T ss_dssp             ------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            34556788999999999999999999999999999999999999999999999899999999999999999999999648


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFP  168 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  168 (262)
                      |++|+||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       269 giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  348 (446)
T 4ejn_A          269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  348 (446)
T ss_dssp             CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCC
Confidence            99999999999999999999999999987654444445567899999999999988999999999999999999999999


Q ss_pred             CCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCC-----CHHHHhcCccccccCC
Q 024828          169 YSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRL-----SAQELMTHPFLKMYGD  237 (262)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----t~~~~l~h~~~~~~~~  237 (262)
                      |...+..       .....+......  .+..+++++.+||.+||+.||.+||     |++|+++||||+....
T Consensus       349 f~~~~~~-------~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~  413 (446)
T 4ejn_A          349 FYNQDHE-------KLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW  413 (446)
T ss_dssp             SCCSSHH-------HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             CCCCCHH-------HHHHHHHhCCCC--CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCH
Confidence            9875432       223333333222  2346899999999999999999999     9999999999998653


No 54 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=9.2e-45  Score=299.68  Aligned_cols=225  Identities=22%  Similarity=0.391  Sum_probs=174.6

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      .....+.+.+|++++++++||||+++++++.++...++||||+.| +|.+++...+.++...+..++.|++.||+|||+ 
T Consensus        73 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~-  150 (329)
T 3gbz_A           73 EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS-  150 (329)
T ss_dssp             -------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence            444566788999999999999999999999999999999999976 999999998899999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEc-----cCCcEEEEecccccccccCCCCcccccccccccCcccccCCC-CCcchhHHHHHHHHHH
Q 024828           88 KHIIHRDLKPSNLLIN-----HRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGK-YGYKSDIWSLGLVLLE  161 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~-----~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~  161 (262)
                      .|++|+||||+||+++     .++.++|+|||++..............++..|+|||++.+.. ++.++|||||||++|+
T Consensus       151 ~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  230 (329)
T 3gbz_A          151 RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAE  230 (329)
T ss_dssp             TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHH
Confidence            9999999999999995     445599999999987655444445567899999999998754 8999999999999999


Q ss_pred             HHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCC------------------------CCCCCHHHHHHHHHhhcCCc
Q 024828          162 CATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAP------------------------SDQFSPEFCSFISACVQKEP  217 (262)
Q Consensus       162 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~li~~~l~~~p  217 (262)
                      |++|+.||......+.   ................+                        ...+++++.+||.+||+.||
T Consensus       231 ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  307 (329)
T 3gbz_A          231 MLMKTPLFPGDSEIDQ---LFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDP  307 (329)
T ss_dssp             HHHSSCSSCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSG
T ss_pred             HHHCCCCcCCCCHHHH---HHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCCh
Confidence            9999999987654322   22222221111110000                        01167899999999999999


Q ss_pred             CCCCCHHHHhcCccccccCC
Q 024828          218 QQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       218 ~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .+|||++|+++||||+....
T Consensus       308 ~~R~t~~e~l~hp~f~~~~~  327 (329)
T 3gbz_A          308 VKRISAKNALEHPYFSHNDF  327 (329)
T ss_dssp             GGSCCHHHHHTSGGGSSSCS
T ss_pred             hhCCCHHHHhCCcccCCCCC
Confidence            99999999999999998653


No 55 
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=4.6e-44  Score=290.40  Aligned_cols=217  Identities=31%  Similarity=0.596  Sum_probs=186.6

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE----CCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYS----NGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLY   83 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~   83 (262)
                      +....+.+.+|++++++++||||+++++++.+    +...++||||+++++|.+++.+.+.++...+..++.|++.||.|
T Consensus        65 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  144 (290)
T 1t4h_A           65 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQF  144 (290)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHH
Confidence            56778899999999999999999999999876    35689999999999999999998899999999999999999999


Q ss_pred             HhhcCC--eeeCCCCCCCEEEc-cCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHH
Q 024828           84 LHHEKH--IIHRDLKPSNLLIN-HRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        84 lh~~~~--i~H~dl~p~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~  160 (262)
                      ||+ .|  ++|+||+|+||+++ .++.++|+|||++......  ......+++.|+|||.+.+ .++.++|+||||++++
T Consensus       145 lH~-~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~  220 (290)
T 1t4h_A          145 LHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCML  220 (290)
T ss_dssp             HHT-SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHH
T ss_pred             HHc-CCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc--ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHH
Confidence            998 88  99999999999997 7889999999998654322  2334568999999998874 5899999999999999


Q ss_pred             HHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          161 ECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       161 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      +|++|+.||......      .........+..+.......++++.+++.+||+.||.+|||++++++||||+.
T Consensus       221 ~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          221 EMATSEYPYSECQNA------AQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHSSCTTTTCSSH------HHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHhCCCCCCCcCcH------HHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            999999999765432      23444555555555555677899999999999999999999999999999986


No 56 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=4.9e-44  Score=300.09  Aligned_cols=220  Identities=28%  Similarity=0.499  Sum_probs=189.0

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ..+.+.+|+++++.++||||+++++++.+....|+||||+.|++|.+++...+.+++..+..++.|++.||.|||+ .|+
T Consensus        58 ~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~-~gi  136 (384)
T 4fr4_A           58 EVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN-QRI  136 (384)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH-TTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCc
Confidence            4567889999999999999999999999999999999999999999999998899999999999999999999999 999


Q ss_pred             eeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC---CCCCcchhHHHHHHHHHHHHhCCC
Q 024828           91 IHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG---GKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      +|+||||+||+++.+|.++|+|||++...... .......|++.|+|||++.+   ..++.++|+|||||++|+|++|+.
T Consensus       137 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~  215 (384)
T 4fr4_A          137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR  215 (384)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCTT-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             eeccCcHHHeEECCCCCEEEeccceeeeccCC-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCC
Confidence            99999999999999999999999999765432 33445679999999999874   358999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCC-HHHHhcCccccccCCc
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLS-AQELMTHPFLKMYGDL  238 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt-~~~~l~h~~~~~~~~~  238 (262)
                      ||.......    .......+......  .+..+++++.+||.+||+.||.+||+ ++++++||||+.....
T Consensus       216 Pf~~~~~~~----~~~~~~~~~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w~  281 (384)
T 4fr4_A          216 PYHIRSSTS----SKEIVHTFETTVVT--YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWD  281 (384)
T ss_dssp             SSCCCTTSC----HHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCHH
T ss_pred             CCCCCCCcc----HHHHHHHHhhcccC--CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCHH
Confidence            998654432    22333333333322  23468999999999999999999998 9999999999887643


No 57 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=6.8e-44  Score=288.45  Aligned_cols=224  Identities=25%  Similarity=0.441  Sum_probs=191.1

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +....+++.+|++++++++||||+++++++.++...++||||+.|++|.+.+...+.++...+..++.|++.||++||+ 
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-  123 (284)
T 3kk8_A           45 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS-  123 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            4566788999999999999999999999999999999999999999999999988899999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCc---EEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           88 KHIIHRDLKPSNLLINHRGE---VKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~---~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                      .|++|+||+|+||+++.++.   ++|+|||.+....... ......+++.|+|||.+.+..++.++|+||||+++++|++
T Consensus       124 ~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~  202 (284)
T 3kk8_A          124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV  202 (284)
T ss_dssp             TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHH
Confidence            99999999999999986655   9999999987654332 2334578999999999999889999999999999999999


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCccc
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQP--PPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLNV  240 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~~  240 (262)
                      |+.||......       .....+..+.  .+......+++++.+|+.+||+.||.+|||++|+++||||+......-
T Consensus       203 g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~  273 (284)
T 3kk8_A          203 GYPPFWDEDQH-------RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVAS  273 (284)
T ss_dssp             SSCSSCCSSHH-------HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGGG
T ss_pred             CCCCCCCCchh-------HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhHHh
Confidence            99999775432       2222222222  222223478999999999999999999999999999999988765544


No 58 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=2.1e-44  Score=304.80  Aligned_cols=216  Identities=27%  Similarity=0.473  Sum_probs=183.2

Q ss_pred             HHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeeC
Q 024828           14 QIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHIIHR   93 (262)
Q Consensus        14 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~   93 (262)
                      .+.+|.++++.++||||+++++++.++...|+||||++|++|.+++++ ..+++..+..++.|++.||+|||+ .|++|+
T Consensus       115 ~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~-~givHr  192 (410)
T 3v8s_A          115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHS-MGFIHR  192 (410)
T ss_dssp             THHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH-TTEECC
T ss_pred             HHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH-CCeEec
Confidence            478999999999999999999999999999999999999999999976 579999999999999999999999 999999


Q ss_pred             CCCCCCEEEccCCcEEEEecccccccccCCC-CcccccccccccCcccccCCC----CCcchhHHHHHHHHHHHHhCCCC
Q 024828           94 DLKPSNLLINHRGEVKITDFGVSAIMASTSG-QANTFVGTYNYMSPERISGGK----YGYKSDIWSLGLVLLECATGQFP  168 (262)
Q Consensus        94 dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~----~~~~~Di~slG~~l~~l~~g~~p  168 (262)
                      ||||+||+++.++.++|+|||++........ ......|++.|+|||++.+..    ++.++|+||||+++|+|++|+.|
T Consensus       193 DLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~P  272 (410)
T 3v8s_A          193 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP  272 (410)
T ss_dssp             CCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCT
T ss_pred             cCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCC
Confidence            9999999999999999999999976543321 233567999999999998654    78999999999999999999999


Q ss_pred             CCCCCccCchhhHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHhhcCCcCC--CCCHHHHhcCccccccCCc
Q 024828          169 YSPPEQQDGWTSFYELMEAIVDQP--PPSAPSDQFSPEFCSFISACVQKEPQQ--RLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~--Rpt~~~~l~h~~~~~~~~~  238 (262)
                      |...+..+       ....+....  ........+++++.+||.+||+.+|.+  ||+++|+++||||+.....
T Consensus       273 f~~~~~~~-------~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~  339 (410)
T 3v8s_A          273 FYADSLVG-------TYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA  339 (410)
T ss_dssp             TCCSSHHH-------HHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCC
T ss_pred             CCCCChhh-------HHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHH
Confidence            98755432       222222211  111122468999999999999999988  9999999999999986543


No 59 
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=1.6e-43  Score=287.70  Aligned_cols=220  Identities=27%  Similarity=0.415  Sum_probs=192.4

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +...++.+.+|+.++++++||||+++++++.+++..++||||+++++|.+++...+.++...+..++.|++.||++||+ 
T Consensus        55 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-  133 (294)
T 2rku_A           55 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR-  133 (294)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            4567788999999999999999999999999999999999999999999999988899999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      .|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+..++.++|+||||+++++|++|+.
T Consensus       134 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~  213 (294)
T 2rku_A          134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP  213 (294)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999876544444455678999999999998889999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      ||......       +....+.....  ..+..+++++.+++.+||+.||++|||++++++||||+....
T Consensus       214 p~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          214 PFETSCLK-------ETYLRIKKNEY--SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  274 (294)
T ss_dssp             TTCCSSHH-------HHHHHHHTTCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             CCCCCCHH-------HHHHHHhhccC--CCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence            99875432       22233333322  223468899999999999999999999999999999987654


No 60 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=2.7e-44  Score=301.01  Aligned_cols=218  Identities=27%  Similarity=0.493  Sum_probs=180.7

Q ss_pred             HHHHHHHHHHHHH-HhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKI-NQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ......+.+|..+ ++.++||||+++++.+.+.+..|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ 
T Consensus        79 ~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-  157 (373)
T 2r5t_A           79 KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS-  157 (373)
T ss_dssp             ------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            4455667778877 57789999999999999999999999999999999999998899999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      .|++|+||||+||+++.+|.++|+|||++..............|++.|+|||++.+..++.++|+|||||++|+|++|..
T Consensus       158 ~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~  237 (373)
T 2r5t_A          158 LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP  237 (373)
T ss_dssp             TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999865544445556789999999999999889999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCH----HHHhcCccccccC
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSA----QELMTHPFLKMYG  236 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~----~~~l~h~~~~~~~  236 (262)
                      ||...+..       +....+......  .+..+++++.+||.+||+.||.+||++    +++++||||+...
T Consensus       238 Pf~~~~~~-------~~~~~i~~~~~~--~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~  301 (373)
T 2r5t_A          238 PFYSRNTA-------EMYDNILNKPLQ--LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN  301 (373)
T ss_dssp             TTCCSBHH-------HHHHHHHHSCCC--CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred             CCCCCCHH-------HHHHHHHhcccC--CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence            99875432       333333333222  234689999999999999999999986    6999999998765


No 61 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=2.1e-44  Score=306.97  Aligned_cols=222  Identities=23%  Similarity=0.445  Sum_probs=185.2

Q ss_pred             HHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCCeee
Q 024828           14 QIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYLHHEKHIIH   92 (262)
Q Consensus        14 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H   92 (262)
                      .+.+|..++..++||||+++++++.+++..|+||||+.|++|.+++.+ .+.+++..+..++.|++.||+|||+ .|++|
T Consensus       120 ~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~-~giiH  198 (437)
T 4aw2_A          120 CFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ-LHYVH  198 (437)
T ss_dssp             CHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH-TTEEC
T ss_pred             HHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHh-CCeEe
Confidence            388999999999999999999999999999999999999999999987 4689999999999999999999999 99999


Q ss_pred             CCCCCCCEEEccCCcEEEEecccccccccCCC-CcccccccccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCC
Q 024828           93 RDLKPSNLLINHRGEVKITDFGVSAIMASTSG-QANTFVGTYNYMSPERIS-----GGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        93 ~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~-----~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      +||||+||+++.++.++|+|||++........ ......|++.|+|||++.     +..++.++|+|||||++|+|++|+
T Consensus       199 rDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~  278 (437)
T 4aw2_A          199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE  278 (437)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSS
T ss_pred             cccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCC
Confidence            99999999999999999999999876543322 223457999999999987     456899999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCC--CCCHHHHhcCccccccCCccc
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQ--RLSAQELMTHPFLKMYGDLNV  240 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~--Rpt~~~~l~h~~~~~~~~~~~  240 (262)
                      .||...+..+....+   .........+ .....+++++.+||++||..+|++  ||+++|+++||||+...+..+
T Consensus       279 ~Pf~~~~~~~~~~~i---~~~~~~~~~p-~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~l  350 (437)
T 4aw2_A          279 TPFYAESLVETYGKI---MNHKERFQFP-TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNI  350 (437)
T ss_dssp             CTTCCSSHHHHHHHH---HTHHHHCCCC-SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTTG
T ss_pred             CCCCCCChhHHHHhh---hhccccccCC-cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHHH
Confidence            999875543222111   1111111222 222468999999999999988888  999999999999988765443


No 62 
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=4.5e-44  Score=293.59  Aligned_cols=225  Identities=36%  Similarity=0.637  Sum_probs=191.3

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +...+++.+|++++++++||||+++++++.+++..++||||+++++|.+++.. ...++...+..++.|++.||.+||+ 
T Consensus        65 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-  143 (314)
T 3com_A           65 ESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF-  143 (314)
T ss_dssp             TSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence            34456789999999999999999999999999999999999999999999974 4679999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      .|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+..++.++|+||||+++|+|++|..
T Consensus       144 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  223 (314)
T 3com_A          144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKP  223 (314)
T ss_dssp             TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999776554444455678999999999998889999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcccc
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQP-PPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLNVD  241 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~~~  241 (262)
                      ||.......       ......... ........+++++.+|+.+||..||.+|||++++++||||+........
T Consensus       224 p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~~~~  291 (314)
T 3com_A          224 PYADIHPMR-------AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSIL  291 (314)
T ss_dssp             TTTTSCHHH-------HHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCGGGG
T ss_pred             CCCCCChHH-------HHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcchHH
Confidence            998654321       111222222 2222234578999999999999999999999999999999988766554


No 63 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=4.3e-44  Score=289.01  Aligned_cols=217  Identities=30%  Similarity=0.486  Sum_probs=185.1

Q ss_pred             HHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCee
Q 024828           12 RRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHII   91 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~   91 (262)
                      .+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++.+.+.++...+..++.|++.||+|||+ .|++
T Consensus        53 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~i~  131 (279)
T 3fdn_A           53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS-KRVI  131 (279)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT-TTCE
T ss_pred             HHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCEe
Confidence            567899999999999999999999999999999999999999999999988899999999999999999999998 9999


Q ss_pred             eCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 024828           92 HRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYSP  171 (262)
Q Consensus        92 H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  171 (262)
                      |+||+|+||+++.++.++|+|||++......  ......++..|+|||.+.+..++.++|+||||+++++|++|..||..
T Consensus       132 H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  209 (279)
T 3fdn_A          132 HRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA  209 (279)
T ss_dssp             ECCCCGGGEEECTTSCEEECSCCEESCC----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cccCChHhEEEcCCCCEEEEeccccccCCcc--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC
Confidence            9999999999999999999999988654322  22345688999999999988899999999999999999999999986


Q ss_pred             CCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCccc
Q 024828          172 PEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLNV  240 (262)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~~  240 (262)
                      ....       .....+......  .+..+++++.+|+.+||+.||.+|||++|+++||||+.......
T Consensus       210 ~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~~~~  269 (279)
T 3fdn_A          210 NTYQ-------ETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS  269 (279)
T ss_dssp             SSHH-------HHHHHHHHTCCC--CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCSSCC
T ss_pred             CcHH-------HHHHHHHhCCCC--CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCccCcc
Confidence            5432       222222222222  23468899999999999999999999999999999988775543


No 64 
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=6e-44  Score=287.96  Aligned_cols=216  Identities=28%  Similarity=0.508  Sum_probs=161.7

Q ss_pred             HHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           12 RRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      .+++.+|++++++++||||+++++++.+.+..++||||+++++|.+++... ++++...+..++.|++.||.|||+ .|+
T Consensus        55 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i  133 (278)
T 3cok_A           55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS-HGI  133 (278)
T ss_dssp             HHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHH-TTE
T ss_pred             HHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH-CCe
Confidence            467899999999999999999999999999999999999999999999876 579999999999999999999999 999


Q ss_pred             eeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 024828           91 IHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYS  170 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  170 (262)
                      +|+||+|+||+++.++.++|+|||.+..............+++.|+|||.+.+..++.++|+||||+++++|++|+.||.
T Consensus       134 ~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  213 (278)
T 3cok_A          134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD  213 (278)
T ss_dssp             ECSSCCGGGEEECTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSC
T ss_pred             ecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999998876544444445578899999999998889999999999999999999999998


Q ss_pred             CCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          171 PPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .......       ........  ...+..++.++.+++.+||+.||++|||++++++||||+....
T Consensus       214 ~~~~~~~-------~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  271 (278)
T 3cok_A          214 TDTVKNT-------LNKVVLAD--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSS  271 (278)
T ss_dssp             CCSCC------------CCSSC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC----
T ss_pred             ChhHHHH-------HHHHhhcc--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCCC
Confidence            7554321       11111111  1223468899999999999999999999999999999987553


No 65 
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=2e-43  Score=292.32  Aligned_cols=219  Identities=27%  Similarity=0.423  Sum_probs=191.4

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +...++.+.+|+.+++.++||||+++++++.+++..++||||+.+++|.+++...+.++...+..++.|++.||+|||+ 
T Consensus        81 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-  159 (335)
T 2owb_A           81 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR-  159 (335)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            4567888999999999999999999999999999999999999999999999988899999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      .|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+..++.++|+||||+++|+|++|+.
T Consensus       160 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  239 (335)
T 2owb_A          160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP  239 (335)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcC
Confidence            99999999999999999999999999999876544444455678999999999998889999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      ||......       +....+.....  ..+..+++++.+|+.+||+.||++|||++++++||||+...
T Consensus       240 pf~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~  299 (335)
T 2owb_A          240 PFETSCLK-------ETYLRIKKNEY--SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  299 (335)
T ss_dssp             TTCCSSHH-------HHHHHHHHTCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             CCCCCCHH-------HHHHHHhcCCC--CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence            99865432       12222222222  12346889999999999999999999999999999998654


No 66 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.3e-45  Score=301.76  Aligned_cols=220  Identities=26%  Similarity=0.487  Sum_probs=176.1

Q ss_pred             HHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCCeee
Q 024828           14 QIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLHHEKHIIH   92 (262)
Q Consensus        14 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh~~~~i~H   92 (262)
                      .+.+|++++++++||||+++++++.+++..++||||+.| +|.+++...+ .++...+..++.|++.||.|||+ .|++|
T Consensus        46 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH  123 (324)
T 3mtl_A           46 TAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR-QKVLH  123 (324)
T ss_dssp             CCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH-TTEEE
T ss_pred             hHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccC
Confidence            566899999999999999999999999999999999976 9999987754 59999999999999999999999 99999


Q ss_pred             CCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 024828           93 RDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGLVLLECATGQFPYSP  171 (262)
Q Consensus        93 ~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~  171 (262)
                      +||+|+||+++.++.++|+|||++..............++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+
T Consensus       124 ~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  203 (324)
T 3mtl_A          124 RDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG  203 (324)
T ss_dssp             SSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999999998766544444445578999999999887 4589999999999999999999999987


Q ss_pred             CCccCchhhHHHHHHHHhcCCCCCC-------------------------CCCCCCHHHHHHHHHhhcCCcCCCCCHHHH
Q 024828          172 PEQQDGWTSFYELMEAIVDQPPPSA-------------------------PSDQFSPEFCSFISACVQKEPQQRLSAQEL  226 (262)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~  226 (262)
                      ....+..    ..+...........                         ....+++++.+|+.+||+.||.+|||++|+
T Consensus       204 ~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  279 (324)
T 3mtl_A          204 STVEEQL----HFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDA  279 (324)
T ss_dssp             SSHHHHH----HHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             CCHHHHH----HHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHH
Confidence            6543221    11111111111100                         012468899999999999999999999999


Q ss_pred             hcCccccccCCcc
Q 024828          227 MTHPFLKMYGDLN  239 (262)
Q Consensus       227 l~h~~~~~~~~~~  239 (262)
                      ++||||+...+..
T Consensus       280 l~hp~f~~~~~~~  292 (324)
T 3mtl_A          280 MKHPFFLSLGERI  292 (324)
T ss_dssp             TTSGGGGGGCSTT
T ss_pred             hcChhhhhccccc
Confidence            9999999887543


No 67 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=4.9e-44  Score=307.66  Aligned_cols=214  Identities=29%  Similarity=0.522  Sum_probs=187.3

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ....+.+|+++++.++||||+++++++.+.+..++||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ .|+
T Consensus        59 ~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~-~gi  137 (476)
T 2y94_A           59 VVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR-HMV  137 (476)
T ss_dssp             THHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHT-TTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCC
Confidence            3567899999999999999999999999999999999999999999999988899999999999999999999998 999


Q ss_pred             eeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCC
Q 024828           91 IHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      +|+||||+||+++.++.++|+|||++...... .......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||
T Consensus       138 vHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf  216 (476)
T 2y94_A          138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF  216 (476)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCSSCEECCTT-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CcccccHHHEEEecCCCeEEEeccchhhcccc-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCC
Confidence            99999999999999999999999998765432 23345678999999999998765 78999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccccc
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMY  235 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~  235 (262)
                      ......       .....+..+...  .+..+++++.+|+.+||+.||.+|||++++++||||+..
T Consensus       217 ~~~~~~-------~~~~~i~~~~~~--~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          217 DDDHVP-------TLFKKICDGIFY--TPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             CCSSSH-------HHHHHHHTTCCC--CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             CCCCHH-------HHHHHHhcCCcC--CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            865432       333444444332  234688999999999999999999999999999999764


No 68 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=2.2e-44  Score=298.65  Aligned_cols=218  Identities=27%  Similarity=0.441  Sum_probs=184.2

Q ss_pred             HHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeee
Q 024828           14 QIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHIIH   92 (262)
Q Consensus        14 ~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H   92 (262)
                      ...+|++++.++ +||||+++++++.++...|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ .|++|
T Consensus        61 ~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~-~givH  139 (342)
T 2qr7_A           61 DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA-QGVVH  139 (342)
T ss_dssp             CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHH-TTEEC
T ss_pred             ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEe
Confidence            345788888887 7999999999999999999999999999999999998899999999999999999999999 99999


Q ss_pred             CCCCCCCEEEccC-C---cEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 024828           93 RDLKPSNLLINHR-G---EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFP  168 (262)
Q Consensus        93 ~dl~p~nil~~~~-~---~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  168 (262)
                      +||||+||++.++ +   .++|+|||++..............+++.|+|||++.+..++.++|+||||+++|+|++|..|
T Consensus       140 rDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  219 (342)
T 2qr7_A          140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP  219 (342)
T ss_dssp             SCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCC
Confidence            9999999998543 2   59999999998765554455566789999999999877789999999999999999999999


Q ss_pred             CCCCCccCchhhHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          169 YSPPEQQDGWTSFYELMEAIVDQPPPSA--PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      |......    ...+....+..+.....  ....+++++.+||.+||..||++|||++++++||||..+.
T Consensus       220 f~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~  285 (342)
T 2qr7_A          220 FANGPDD----TPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWD  285 (342)
T ss_dssp             SCSSTTS----CHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGG
T ss_pred             CCCCCcC----CHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCcc
Confidence            9864322    22233444444433222  2246899999999999999999999999999999997654


No 69 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.6e-44  Score=302.39  Aligned_cols=222  Identities=23%  Similarity=0.401  Sum_probs=182.6

Q ss_pred             HHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           12 RRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      .+.+.+|.+++..++||||+++++++.+.+..|+||||++|++|.+++.+.+ .+++..+..++.|++.||+|||+ .|+
T Consensus       105 ~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~gi  183 (412)
T 2vd5_A          105 VSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR-LGY  183 (412)
T ss_dssp             GCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHH-TTE
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCe
Confidence            3457899999999999999999999999999999999999999999998764 79999999999999999999999 999


Q ss_pred             eeCCCCCCCEEEccCCcEEEEecccccccccCCC-CcccccccccccCccccc-------CCCCCcchhHHHHHHHHHHH
Q 024828           91 IHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG-QANTFVGTYNYMSPERIS-------GGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~-------~~~~~~~~Di~slG~~l~~l  162 (262)
                      +|+||||+||+++.++.++|+|||++........ ......|++.|+|||++.       +..++.++|+|||||++|+|
T Consensus       184 iHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyel  263 (412)
T 2vd5_A          184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEM  263 (412)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHH
T ss_pred             eecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHH
Confidence            9999999999999999999999999976543322 223457999999999987       35689999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCC---CCHHHHhcCccccccCCcc
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQR---LSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R---pt~~~~l~h~~~~~~~~~~  239 (262)
                      ++|+.||...+..+....+...   ...... +.....+++++.+||++||. +|.+|   |+++++++||||+...+..
T Consensus       264 ltG~~Pf~~~~~~~~~~~i~~~---~~~~~~-p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~  338 (412)
T 2vd5_A          264 FYGQTPFYADSTAETYGKIVHY---KEHLSL-PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDG  338 (412)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHTH---HHHCCC-C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTT
T ss_pred             HhCCCCCCCCCHHHHHHHHHhc---ccCcCC-CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHH
Confidence            9999999876543222111111   111111 21235689999999999999 99998   5999999999998765443


No 70 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=5.5e-44  Score=287.79  Aligned_cols=216  Identities=29%  Similarity=0.507  Sum_probs=173.9

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ..+..+.+.+|++++++++||||+++++++.+.+..++||||+ +++|.+++...+.+++..+..++.|++.||.+||+ 
T Consensus        53 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-  130 (275)
T 2eue_A           53 KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR-  130 (275)
T ss_dssp             ---CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            3445678999999999999999999999999999999999999 66999999988899999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHHhCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~  166 (262)
                      .|++|+||+|+||+++.++.++|+|||.+....... ......++..|+|||.+.+..+ +.++|+||||+++++|++|+
T Consensus       131 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~  209 (275)
T 2eue_A          131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR  209 (275)
T ss_dssp             TTCCCCCCSGGGEEECTTSCEEECCSSCC----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSS
T ss_pred             CCCeeccCChHhEEECCCCCEEEeecccceeccCcc-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCC
Confidence            999999999999999999999999999987654332 2334568999999999987765 78999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccccc
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMY  235 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~  235 (262)
                      .||......       .....+..+...  .+..+++++.+|+.+||+.||.+|||++|+++||||+..
T Consensus       210 ~pf~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~  269 (275)
T 2eue_A          210 LPFDDESIP-------VLFKNISNGVYT--LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             CSSCCSSHH-------HHHHHHHHTCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             CCCCCCCHH-------HHHHHHHhCCCC--CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeeccc
Confidence            999864432       233333333322  235689999999999999999999999999999999864


No 71 
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=7.4e-44  Score=287.03  Aligned_cols=224  Identities=24%  Similarity=0.429  Sum_probs=188.0

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ....+.+.+|+.+++.++||||+++++++.+++..++||||+++++|.+++.....++...+..++.|++.||.+||+ .
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~  124 (276)
T 2yex_A           46 VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-I  124 (276)
T ss_dssp             TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh-C
Confidence            345678999999999999999999999999999999999999999999999887889999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCC--CCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHHhC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g  165 (262)
                      |++|+||+|+||+++.++.++|+|||.+.......  .......++..|+|||.+.+..+ +.++|+||||+++++|++|
T Consensus       125 ~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  204 (276)
T 2yex_A          125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG  204 (276)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHS
T ss_pred             CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhC
Confidence            99999999999999999999999999987653322  22334568899999999987765 7799999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      +.||........      ....+............+++++.+|+.+||+.||.+|||++++++||||+.....+
T Consensus       205 ~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~  272 (276)
T 2yex_A          205 ELPWDQPSDSCQ------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKG  272 (276)
T ss_dssp             SCCCSCSCTTSH------HHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC--
T ss_pred             CCCCCCCchHHH------HHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhhcc
Confidence            999987554321      11222222222223346899999999999999999999999999999998765543


No 72 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.1e-43  Score=286.32  Aligned_cols=218  Identities=29%  Similarity=0.469  Sum_probs=186.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ...+.+.+|++++++++||||+++++++.++...++||||+++++|.+++...+.+++..+..++.|++.||++||+ .|
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~  126 (277)
T 3f3z_A           48 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK-LN  126 (277)
T ss_dssp             SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            34567899999999999999999999999999999999999999999999988899999999999999999999998 99


Q ss_pred             eeeCCCCCCCEEE---ccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           90 IIHRDLKPSNLLI---NHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        90 i~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      ++|+||+|+||++   +.++.++|+|||.+...... .......+++.|+|||.+.+ .++.++|+||||+++++|++|+
T Consensus       127 i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~  204 (277)
T 3f3z_A          127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGY  204 (277)
T ss_dssp             EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc-cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCC
Confidence            9999999999999   77889999999998765433 23344578999999999875 4899999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSAP--SDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .||......       .....+..+......  ...+++++.+++.+||+.||.+|||+.++++||||+....
T Consensus       205 ~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          205 PPFSAPTDS-------EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             CSSCCSSHH-------HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred             CCCCCCCHH-------HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence            999875432       233333333322211  1267899999999999999999999999999999976543


No 73 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1.2e-43  Score=291.97  Aligned_cols=218  Identities=27%  Similarity=0.473  Sum_probs=187.5

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ..+++.+|++++++++||||+++++++.+....++||||++|++|.+++...+.++...+..++.|++.||+|||+ .|+
T Consensus        58 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~-~~i  136 (321)
T 2a2a_A           58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT-KKI  136 (321)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHH-TTE
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCe
Confidence            3677899999999999999999999999999999999999999999999988889999999999999999999999 999


Q ss_pred             eeCCCCCCCEEEccCC----cEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           91 IHRDLKPSNLLINHRG----EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~----~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      +|+||+|+||+++.++    .++|+|||++....... ......+++.|+|||.+.+..++.++|+||||+++|+|++|.
T Consensus       137 vH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  215 (321)
T 2a2a_A          137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA  215 (321)
T ss_dssp             ECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred             ecCCCChHHEEEecCCCCcCCEEEccCccceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCC
Confidence            9999999999998887    79999999987654432 233456899999999999888999999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSA--PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .||......       +....+........  ....+++.+.+|+.+||..||++|||++++++||||+....
T Consensus       216 ~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~~  281 (321)
T 2a2a_A          216 SPFLGDTKQ-------ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDN  281 (321)
T ss_dssp             CSSCCSSHH-------HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSSH
T ss_pred             CCCCCCCHH-------HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCCc
Confidence            999765432       23333333322111  11467899999999999999999999999999999987653


No 74 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-43  Score=297.76  Aligned_cols=220  Identities=24%  Similarity=0.440  Sum_probs=186.3

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ......+.+|++++++++||||+++++++.++...++||||+.|++|.+++...+ .+++..+..++.|++.||+|||+ 
T Consensus        89 ~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~-  167 (387)
T 1kob_A           89 PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE-  167 (387)
T ss_dssp             HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence            3456689999999999999999999999999999999999999999999997654 79999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEcc--CCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhC
Q 024828           88 KHIIHRDLKPSNLLINH--RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g  165 (262)
                      .|++|+||+|+||+++.  ++.++|+|||++....... ......+++.|+|||++.+..++.++|||||||++|+|++|
T Consensus       168 ~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  246 (387)
T 1kob_A          168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG  246 (387)
T ss_dssp             TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHS
T ss_pred             CCeeecccchHHeEEecCCCCceEEEecccceecCCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhC
Confidence            99999999999999974  4679999999997654322 22344689999999999988899999999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQP--PPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      ..||......       .....+....  .+......+++++.+||.+||..||.+|||++++++||||+....
T Consensus       247 ~~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  313 (387)
T 1kob_A          247 LSPFAGEDDL-------ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS  313 (387)
T ss_dssp             CCSSCCSSHH-------HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred             CCCCCCCCHH-------HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence            9999875432       2223333222  122223468999999999999999999999999999999987543


No 75 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=2.9e-43  Score=285.13  Aligned_cols=214  Identities=28%  Similarity=0.567  Sum_probs=175.5

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhh
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV----KTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~----~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ..+.+.+|++++++++||||+++++++.+....++||||+++++|.+++...    ..++...+..++.|++.||+|||+
T Consensus        63 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~  142 (285)
T 3is5_A           63 PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS  142 (285)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4578899999999999999999999999999999999999999999998543    679999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEE---ccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLI---NHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  163 (262)
                       .|++|+||+|+||++   +.++.++|+|||++....... ......++..|+|||.+. ..++.++|+||||+++++|+
T Consensus       143 -~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll  219 (285)
T 3is5_A          143 -QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLL  219 (285)
T ss_dssp             -TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHH
T ss_pred             -CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHH
Confidence             999999999999999   445789999999987654332 233456899999999986 46899999999999999999


Q ss_pred             hCCCCCCCCCccCchhhHHHHHHHHh-cCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          164 TGQFPYSPPEQQDGWTSFYELMEAIV-DQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       164 ~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      +|+.||......       ....... ...........+++++.+|+.+||+.||.+|||++|+++||||++
T Consensus       220 ~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          220 TGCLPFTGTSLE-------EVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HSSCSSCCSSHH-------HHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             hCCCCCCCCCHH-------HHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            999999875432       2222222 222222223457899999999999999999999999999999985


No 76 
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.6e-44  Score=298.42  Aligned_cols=229  Identities=23%  Similarity=0.401  Sum_probs=182.4

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .+....+.+.+|++++++++||||+++++++.+++..++||||+++++|.+++...+.++...+..++.|++.||++||+
T Consensus        63 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~  142 (331)
T 4aaa_A           63 DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS  142 (331)
T ss_dssp             SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35566778899999999999999999999999999999999999998999988877889999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCC-CCCcchhHHHHHHHHHHHHhC
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGG-KYGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~~g  165 (262)
                       .|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+. .++.++||||||+++|+|++|
T Consensus       143 -~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  221 (331)
T 4aaa_A          143 -HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG  221 (331)
T ss_dssp             -TTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHS
T ss_pred             -CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhC
Confidence             999999999999999999999999999997765544444556789999999999875 689999999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHH-----------HH--HhcCCC-CCC--------CCCCCCHHHHHHHHHhhcCCcCCCCCH
Q 024828          166 QFPYSPPEQQDGWTSFYELM-----------EA--IVDQPP-PSA--------PSDQFSPEFCSFISACVQKEPQQRLSA  223 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~-----------~~--~~~~~~-~~~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~  223 (262)
                      +.||......+.........           ..  ...+.. +..        ....+++++.+|+.+||+.||.+|||+
T Consensus       222 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  301 (331)
T 4aaa_A          222 EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC  301 (331)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCG
T ss_pred             CCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCH
Confidence            99998765432211111100           00  000000 000        012578999999999999999999999


Q ss_pred             HHHhcCccccccC
Q 024828          224 QELMTHPFLKMYG  236 (262)
Q Consensus       224 ~~~l~h~~~~~~~  236 (262)
                      +|+|+||||+..+
T Consensus       302 ~ell~hp~f~~~~  314 (331)
T 4aaa_A          302 AELLHHDFFQMDG  314 (331)
T ss_dssp             GGGGGSHHHHGGG
T ss_pred             HHHhcCchhccCC
Confidence            9999999998754


No 77 
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3.9e-43  Score=284.12  Aligned_cols=214  Identities=31%  Similarity=0.516  Sum_probs=186.4

Q ss_pred             HHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCee
Q 024828           12 RRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHII   91 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~   91 (262)
                      .+.+.+|++++++++||||+++++++.+++..++||||+++++|.+++.+.+.++...+..++.|++.||.+||+ .|++
T Consensus        58 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~  136 (284)
T 2vgo_A           58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE-RKVI  136 (284)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT-TTEE
T ss_pred             HHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCce
Confidence            467899999999999999999999999999999999999999999999988899999999999999999999998 9999


Q ss_pred             eCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 024828           92 HRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYSP  171 (262)
Q Consensus        92 H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  171 (262)
                      |+||+|+||+++.++.++|+|||++......  ......++..|+|||.+.+..++.++|+||||+++++|++|..||..
T Consensus       137 H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  214 (284)
T 2vgo_A          137 HRDIKPENLLMGYKGELKIADFGWSVHAPSL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS  214 (284)
T ss_dssp             CCCCSGGGEEECTTCCEEECCCTTCEECSSS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ecCCCHHHEEEcCCCCEEEecccccccCccc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence            9999999999999999999999998654432  23345688999999999988899999999999999999999999987


Q ss_pred             CCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          172 PEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      ....       .....+......  .+..+++++.+++.+||..||.+|||++++++||||+....
T Consensus       215 ~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          215 PSHT-------ETHRRIVNVDLK--FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             SSHH-------HHHHHHHTTCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             CCHh-------HHHHHHhccccC--CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            5432       222333333221  23468899999999999999999999999999999986554


No 78 
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=2.5e-43  Score=292.96  Aligned_cols=218  Identities=33%  Similarity=0.551  Sum_probs=186.9

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      +....+++.+|++++++++||||+++++++.+++..++||||+.| +|.+++.. .++++...+..++.|++.||.|||+
T Consensus        94 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~  172 (348)
T 1u5q_A           94 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS  172 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            456667899999999999999999999999999999999999975 88888854 4679999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCccccc---CCCCCcchhHHHHHHHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERIS---GGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~~l~  163 (262)
                       .|++|+||+|+||+++.++.++|+|||++.....    .....|++.|+|||++.   +..++.++||||||+++++|+
T Consensus       173 -~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell  247 (348)
T 1u5q_A          173 -HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA  247 (348)
T ss_dssp             -TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHH
T ss_pred             -CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHH
Confidence             9999999999999999999999999999876532    23457899999999984   456899999999999999999


Q ss_pred             hCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCc
Q 024828          164 TGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       164 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      +|+.||......       .....+.....+......+++.+.+|+.+||+.||++|||++++++||||......
T Consensus       248 ~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~~  315 (348)
T 1u5q_A          248 ERKPPLFNMNAM-------SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP  315 (348)
T ss_dssp             HSSCTTTTSCHH-------HHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCT
T ss_pred             hCCCCCCCCChH-------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCCc
Confidence            999999765432       22333444444555556789999999999999999999999999999999876543


No 79 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=4.4e-43  Score=305.20  Aligned_cols=220  Identities=27%  Similarity=0.486  Sum_probs=189.2

Q ss_pred             HHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828           12 RRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV----KTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~----~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ...+.+|++++++++||||+++++++.+....|+||||++|++|.+++.+.    ..+++..+..++.|++.||+|||+ 
T Consensus       229 ~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~-  307 (543)
T 3c4z_A          229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ-  307 (543)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH-
Confidence            467889999999999999999999999999999999999999999999764    369999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      .|++|+||||+||+++.+|.++|+|||++..............|++.|+|||++.+..++.++|+|||||++|+|++|+.
T Consensus       308 ~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~  387 (543)
T 3c4z_A          308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG  387 (543)
T ss_dssp             TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCC
Confidence            99999999999999999999999999999876544444445689999999999999889999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCC-----HHHHhcCccccccCC
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLS-----AQELMTHPFLKMYGD  237 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt-----~~~~l~h~~~~~~~~  237 (262)
                      ||..........   .....+......  .+..+++++.+||.+||+.||.+||+     ++++++||||+....
T Consensus       388 PF~~~~~~~~~~---~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w  457 (543)
T 3c4z_A          388 PFRARGEKVENK---ELKQRVLEQAVT--YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISW  457 (543)
T ss_dssp             SSCCTTCCCCHH---HHHHHHHHCCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCH
T ss_pred             CCCCCccchhHH---HHHHHHhhcccC--CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCH
Confidence            998765432222   233333333322  23578999999999999999999996     589999999998653


No 80 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=1.5e-43  Score=307.36  Aligned_cols=218  Identities=30%  Similarity=0.505  Sum_probs=186.3

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ......+.+|+++++.++||||+++++++.+....|+||||+.|++|.+.+.+...+++..+..++.|++.||.|||+ .
T Consensus        77 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~  155 (494)
T 3lij_A           77 TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK-H  155 (494)
T ss_dssp             -CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence            334678899999999999999999999999999999999999999999999988999999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccC---CcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhC
Q 024828           89 HIIHRDLKPSNLLINHR---GEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g  165 (262)
                      |++|+||||+||+++..   +.++|+|||++....... ......|++.|+|||++. ..++.++||||+||++|+|++|
T Consensus       156 ~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g  233 (494)
T 3lij_A          156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAG  233 (494)
T ss_dssp             TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHS
T ss_pred             CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhC
Confidence            99999999999999764   459999999987665332 334557899999999987 4689999999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQPPPSA--PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      ..||......       +....+..+.....  ....+++++.+||.+||+.||.+|||++++|+||||+...
T Consensus       234 ~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~  299 (494)
T 3lij_A          234 YPPFGGQTDQ-------EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMC  299 (494)
T ss_dssp             SCSSCCSSHH-------HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHH
T ss_pred             CCCCCCCCHH-------HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCc
Confidence            9999875432       33344444433222  2246899999999999999999999999999999998753


No 81 
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=5.4e-43  Score=285.17  Aligned_cols=223  Identities=26%  Similarity=0.463  Sum_probs=184.6

Q ss_pred             HHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           12 RRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      .+.+.+|++++++++||||+++++++.+++..++||||+.+ +|.+++...  ..++...+..++.|++.||.+||+ .|
T Consensus        46 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~  123 (299)
T 2r3i_A           46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-HR  123 (299)
T ss_dssp             CHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             HHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcccC-CHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            46788999999999999999999999999999999999975 999999876  468999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGK-YGYKSDIWSLGLVLLECATGQFP  168 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p  168 (262)
                      ++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+.. ++.++|+||||+++|+|++|+.|
T Consensus       124 i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  203 (299)
T 2r3i_A          124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRAL  203 (299)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999877654444444557889999999998765 79999999999999999999999


Q ss_pred             CCCCCccCchhhHHHHHHHHhcCCC-------------CCC----------CCCCCCHHHHHHHHHhhcCCcCCCCCHHH
Q 024828          169 YSPPEQQDGWTSFYELMEAIVDQPP-------------PSA----------PSDQFSPEFCSFISACVQKEPQQRLSAQE  225 (262)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  225 (262)
                      |......+.   .............             +..          ....+++++.+|+.+||+.||++|||+++
T Consensus       204 f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~  280 (299)
T 2r3i_A          204 FPGDSEIDQ---LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA  280 (299)
T ss_dssp             CCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CCCccHHHH---HHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHH
Confidence            987654321   1122222111100             000          01247889999999999999999999999


Q ss_pred             HhcCccccccCCcc
Q 024828          226 LMTHPFLKMYGDLN  239 (262)
Q Consensus       226 ~l~h~~~~~~~~~~  239 (262)
                      +++||||+......
T Consensus       281 ~l~hp~~~~~~~~~  294 (299)
T 2r3i_A          281 ALAHPFFQDVTKPV  294 (299)
T ss_dssp             HHTSGGGTTCCCCC
T ss_pred             HhcChhhhcCCCCC
Confidence            99999999766543


No 82 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.9e-44  Score=302.27  Aligned_cols=229  Identities=24%  Similarity=0.436  Sum_probs=181.6

Q ss_pred             hHHHHHHHHHHHHHHhcCC-CCeeEeeceEEEECC--eEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQ-CPYVVVCYQSFYSNG--AISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      +....+++.+|+.+++++. ||||+++++++...+  ..|+||||+.+ +|..++.. +.++...+..++.|++.||+||
T Consensus        48 ~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~L  125 (388)
T 3oz6_A           48 NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRA-NILEPVHKQYVVYQLIKVIKYL  125 (388)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHHHHH-TCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccCc-CHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH
Confidence            4667778899999999997 999999999997643  78999999975 99999976 5799999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccC---------------------CCCcccccccccccCcccccC
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMAST---------------------SGQANTFVGTYNYMSPERISG  143 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~---------------------~~~~~~~~~~~~y~~PE~~~~  143 (262)
                      |+ .|++|+||||+||+++.++.++|+|||++......                     ........+++.|+|||++.+
T Consensus       126 H~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (388)
T 3oz6_A          126 HS-GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG  204 (388)
T ss_dssp             HH-TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT
T ss_pred             Hh-CCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC
Confidence            99 99999999999999999999999999999764321                     111233578999999999987


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHH--------------------HHHhcCC---C--C---
Q 024828          144 -GKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELM--------------------EAIVDQP---P--P---  194 (262)
Q Consensus       144 -~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------------------~~~~~~~---~--~---  194 (262)
                       ..++.++|||||||++++|++|++||.+.+..+....+....                    ..+....   .  .   
T Consensus       205 ~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (388)
T 3oz6_A          205 STKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDI  284 (388)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCC
T ss_pred             CCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHh
Confidence             568999999999999999999999998765433222211110                    0000000   0  0   


Q ss_pred             ----------CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          195 ----------SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       195 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                                ..+....++++.+|+.+||+.||.+|||++|+++||||+.+....
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~~  339 (388)
T 3oz6_A          285 FTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPN  339 (388)
T ss_dssp             HHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCGG
T ss_pred             CcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCCc
Confidence                      001236789999999999999999999999999999998876543


No 83 
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1.3e-43  Score=291.03  Aligned_cols=228  Identities=27%  Similarity=0.435  Sum_probs=179.0

Q ss_pred             HHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           10 SARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ...+++.+|++++.++ +||||+++++++.+++..++||||++|++|.+++.+.+.++...+..++.|++.||+|||+ .
T Consensus        52 ~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~  130 (316)
T 2ac3_A           52 HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN-K  130 (316)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh-C
Confidence            3467889999999885 7999999999999999999999999999999999988899999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCc---EEEEecccccccccCC-------CCcccccccccccCcccccC-----CCCCcchhHH
Q 024828           89 HIIHRDLKPSNLLINHRGE---VKITDFGVSAIMASTS-------GQANTFVGTYNYMSPERISG-----GKYGYKSDIW  153 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~---~~l~df~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~-----~~~~~~~Di~  153 (262)
                      |++|+||+|+||+++.++.   ++|+|||++.......       .......++..|+|||.+.+     ..++.++|||
T Consensus       131 ~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw  210 (316)
T 2ac3_A          131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLW  210 (316)
T ss_dssp             TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHH
T ss_pred             CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccH
Confidence            9999999999999987775   9999999987543221       11223458999999999875     4578999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCccC-chh-------hHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHhhcCCcCCCCCH
Q 024828          154 SLGLVLLECATGQFPYSPPEQQD-GWT-------SFYELMEAIVDQPPPSAP--SDQFSPEFCSFISACVQKEPQQRLSA  223 (262)
Q Consensus       154 slG~~l~~l~~g~~p~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~  223 (262)
                      ||||++|+|++|+.||......+ .|.       ........+..+......  ...+++++.+|+.+||+.||.+|||+
T Consensus       211 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~  290 (316)
T 2ac3_A          211 SLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA  290 (316)
T ss_dssp             HHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             hHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCH
Confidence            99999999999999998754332 111       012233333333322111  13578999999999999999999999


Q ss_pred             HHHhcCccccccCCc
Q 024828          224 QELMTHPFLKMYGDL  238 (262)
Q Consensus       224 ~~~l~h~~~~~~~~~  238 (262)
                      +|+++||||+.....
T Consensus       291 ~e~l~hp~~~~~~~~  305 (316)
T 2ac3_A          291 AQVLQHPWVQGCAPE  305 (316)
T ss_dssp             HHHHHSTTCC-----
T ss_pred             HHHhcChhhcCCCCc
Confidence            999999999986543


No 84 
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=3.4e-43  Score=286.97  Aligned_cols=220  Identities=37%  Similarity=0.640  Sum_probs=190.3

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ...+.+.+|+.++++++||||+++++++.++...++||||+++++|.+++.. ++++...+..++.|++.||.+||+ .|
T Consensus        62 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~-~~  139 (303)
T 3a7i_A           62 DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHS-EK  139 (303)
T ss_dssp             TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            4567899999999999999999999999999999999999999999999876 679999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      ++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+..++.++|+||||+++++|++|+.||
T Consensus       140 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  219 (303)
T 3a7i_A          140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH  219 (303)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCC
Confidence            99999999999999999999999999977655444445567899999999999888999999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      ......       .....+.....+ .....++.++.+|+.+||+.||.+|||++++++||||.......
T Consensus       220 ~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~  281 (303)
T 3a7i_A          220 SELHPM-------KVLFLIPKNNPP-TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT  281 (303)
T ss_dssp             TTSCHH-------HHHHHHHHSCCC-CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCCCG
T ss_pred             CCcCHH-------HHHHHhhcCCCC-CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCCcc
Confidence            765432       222223333332 33457899999999999999999999999999999998766543


No 85 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=2.2e-43  Score=288.95  Aligned_cols=219  Identities=29%  Similarity=0.466  Sum_probs=176.8

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKT---IPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~~l~~l   84 (262)
                      +....+++.+|++++++++||||+++++++.+....++||||+++++|.+++.+.+.   ++...+..++.|++.||+||
T Consensus        74 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L  153 (309)
T 3p86_A           74 HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL  153 (309)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            456677899999999999999999999999999999999999999999999987653   99999999999999999999


Q ss_pred             hhcCC--eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           85 HHEKH--IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        85 h~~~~--i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      |+ .|  ++|+||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++||||||+++|+|
T Consensus       154 H~-~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  232 (309)
T 3p86_A          154 HN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL  232 (309)
T ss_dssp             HT-SSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             Hc-CCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHH
Confidence            98 99  9999999999999999999999999987655444344456789999999999998899999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc--Cccccc
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT--HPFLKM  234 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~--h~~~~~  234 (262)
                      ++|+.||......       ...............+..+++++.+|+.+||+.||.+|||++++++  +++++.
T Consensus       233 ltg~~Pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          233 ATLQQPWGNLNPA-------QVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             HHCCCTTTTSCHH-------HHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             HhCCCCCCCCCHH-------HHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            9999999875432       2223332233333344678999999999999999999999999987  455543


No 86 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=2e-43  Score=315.99  Aligned_cols=217  Identities=26%  Similarity=0.479  Sum_probs=192.3

Q ss_pred             HHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           10 SARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ...+.+.+|.+++..+ +||+|+++++++.+.+.+|+||||++|++|.+++.+.+.+++..+..++.||+.||+|||+ .
T Consensus       383 ~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-~  461 (674)
T 3pfq_A          383 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS-K  461 (674)
T ss_dssp             TTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Confidence            3456788999999988 7999999999999999999999999999999999998999999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFP  168 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  168 (262)
                      ||+|+||||+|||++.++.++|+|||++..............|++.|+|||++.+..++.++|+||||+++|+|++|+.|
T Consensus       462 gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~P  541 (674)
T 3pfq_A          462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP  541 (674)
T ss_dssp             SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCC
Confidence            99999999999999999999999999998654444555667899999999999999999999999999999999999999


Q ss_pred             CCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCH-----HHHhcCccccccC
Q 024828          169 YSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSA-----QELMTHPFLKMYG  236 (262)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-----~~~l~h~~~~~~~  236 (262)
                      |.+.+.       .+....+.......  +..+++++.+||++||+.||.+||++     +|+++||||+...
T Consensus       542 f~~~~~-------~~~~~~i~~~~~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~  605 (674)
T 3pfq_A          542 FEGEDE-------DELFQSIMEHNVAY--PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  605 (674)
T ss_dssp             SCCSSH-------HHHHHHHHSSCCCC--CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred             CCCCCH-------HHHHHHHHhCCCCC--CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence            987543       24445555544322  35789999999999999999999997     9999999998765


No 87 
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=2.6e-43  Score=307.48  Aligned_cols=220  Identities=28%  Similarity=0.499  Sum_probs=188.0

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ....+.+|++++++++||||+++++++.+.+..|+||||++|++|.+++...+  .+++..+..++.||+.||+|||+ .
T Consensus       227 ~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~-~  305 (576)
T 2acx_A          227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR-E  305 (576)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             HHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence            34568899999999999999999999999999999999999999999998764  39999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFP  168 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  168 (262)
                      |++|+||||+||+++.+|.++|+|||++....... ......|++.|+|||++.+..++.++|+|||||++|+|++|+.|
T Consensus       306 gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~P  384 (576)
T 2acx_A          306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP  384 (576)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCS
T ss_pred             CEeccCCchheEEEeCCCCeEEEecccceecccCc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999997654322 23345799999999999988899999999999999999999999


Q ss_pred             CCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCC-----CHHHHhcCccccccCC
Q 024828          169 YSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRL-----SAQELMTHPFLKMYGD  237 (262)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----t~~~~l~h~~~~~~~~  237 (262)
                      |..............   .+....  ...+..+++++.+||.+||+.||.+||     +++|+++||||+....
T Consensus       385 F~~~~~~~~~~~i~~---~i~~~~--~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w  453 (576)
T 2acx_A          385 FQQRKKKIKREEVER---LVKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNF  453 (576)
T ss_dssp             SSCSSSCCCHHHHHH---HHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCH
T ss_pred             CcccccchhHHHHHH---Hhhccc--ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCH
Confidence            987654433222222   222222  222357899999999999999999999     8999999999998653


No 88 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.2e-43  Score=307.44  Aligned_cols=219  Identities=26%  Similarity=0.488  Sum_probs=186.3

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ....+.+|++++++++||||+++++++.+....++||||+.|++|.+.+.+.+.+++..+..++.|++.||.|||+ .|+
T Consensus        64 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~i  142 (486)
T 3mwu_A           64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK-HNI  142 (486)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             HHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCe
Confidence            4578899999999999999999999999999999999999999999999888999999999999999999999999 999


Q ss_pred             eeCCCCCCCEEEc---cCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 024828           91 IHRDLKPSNLLIN---HRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        91 ~H~dl~p~nil~~---~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      +|+||||+||+++   .++.++|+|||++...... .......|++.|+|||++.+ .++.++||||+||++|+|++|..
T Consensus       143 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~  220 (486)
T 3mwu_A          143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTP  220 (486)
T ss_dssp             CCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             EeccCchHHEEEecCCCCCCEEEEECCcCeECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCC
Confidence            9999999999995   4557999999998765433 23344578999999999986 58999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSA--PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      ||.+....       +....+..+.....  ....+++++.+||.+||+.||.+|||+.++|+||||+......
T Consensus       221 pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~  287 (486)
T 3mwu_A          221 PFYGKNEY-------DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSET  287 (486)
T ss_dssp             SSCCSSHH-------HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCC
T ss_pred             CCCCCCHH-------HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcccC
Confidence            99875432       33344443332221  2246789999999999999999999999999999999876554


No 89 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=1.3e-43  Score=292.63  Aligned_cols=217  Identities=25%  Similarity=0.393  Sum_probs=177.9

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECC----------------------------------------------
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNG----------------------------------------------   41 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----------------------------------------------   41 (262)
                      .+...+.+.+|++++++++||||+++++++.+..                                              
T Consensus        44 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (332)
T 3qd2_B           44 RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNT  123 (332)
T ss_dssp             TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------------------------------------
T ss_pred             chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccc
Confidence            4556788999999999999999999999986543                                              


Q ss_pred             -----------eEEEEEeecCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCc
Q 024828           42 -----------AISIILEYMDGGSLADFLKKVKT---IPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGE  107 (262)
Q Consensus        42 -----------~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~  107 (262)
                                 ..++||||++|++|.+++.+...   .+...+..++.|++.||+|||+ .|++|+||||+||+++.++.
T Consensus       124 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~  202 (332)
T 3qd2_B          124 VGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS-KGLMHRDLKPSNIFFTMDDV  202 (332)
T ss_dssp             --------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCC
T ss_pred             cccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHh-CCeeecCCCcccEEEeCCCC
Confidence                       38999999999999999987643   5666789999999999999998 99999999999999999999


Q ss_pred             EEEEecccccccccCC------------CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcc
Q 024828          108 VKITDFGVSAIMASTS------------GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYSPPEQQ  175 (262)
Q Consensus       108 ~~l~df~~~~~~~~~~------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  175 (262)
                      ++|+|||++.......            .......|++.|+|||.+.+..++.++|+||||+++|+|++|..|+.     
T Consensus       203 ~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----  277 (332)
T 3qd2_B          203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----  277 (332)
T ss_dssp             EEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----
T ss_pred             EEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----
Confidence            9999999997765432            12233568999999999999889999999999999999999876542     


Q ss_pred             CchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccccc
Q 024828          176 DGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMY  235 (262)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~  235 (262)
                          ..............+.. ....++++.+|+.+||+.||.+|||++|+++||||+..
T Consensus       278 ----~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~~  332 (332)
T 3qd2_B          278 ----ERVRIITDVRNLKFPLL-FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL  332 (332)
T ss_dssp             ----HHHHHHHHHHTTCCCHH-HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCCC
T ss_pred             ----HHHHHHHHhhccCCCcc-cccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhcC
Confidence                22233333333332221 23456788999999999999999999999999999863


No 90 
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=7.8e-44  Score=293.60  Aligned_cols=224  Identities=35%  Similarity=0.653  Sum_probs=181.2

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEE------CCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYS------NGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAICEQVL   78 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~------~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~   78 (262)
                      .....+.+.+|+.+++++ +||||+++++++..      ....++||||+++++|.+++...  ..++...+..++.|++
T Consensus        60 ~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~  139 (326)
T 2x7f_A           60 TGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL  139 (326)
T ss_dssp             CSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHH
Confidence            344557888999999999 89999999999987      46799999999999999999865  5699999999999999


Q ss_pred             HHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCccccc-----CCCCCcchhHH
Q 024828           79 KGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERIS-----GGKYGYKSDIW  153 (262)
Q Consensus        79 ~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~-----~~~~~~~~Di~  153 (262)
                      .||.|||+ .|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.     +..++.++|||
T Consensus       140 ~~l~~lH~-~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~  218 (326)
T 2x7f_A          140 RGLSHLHQ-HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLW  218 (326)
T ss_dssp             HHHHHHHH-TTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHH
T ss_pred             HHHHHHHH-CCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHH
Confidence            99999999 9999999999999999999999999999876654433344557899999999987     45688999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccc
Q 024828          154 SLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLK  233 (262)
Q Consensus       154 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~  233 (262)
                      |||+++|+|++|..||......       .....+.....+......+++.+.+||.+||..||.+|||++++++||||+
T Consensus       219 slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~  291 (326)
T 2x7f_A          219 SLGITAIEMAEGAPPLCDMHPM-------RALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIR  291 (326)
T ss_dssp             HHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHH-------HHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHh
Confidence            9999999999999999765432       222233334444444567899999999999999999999999999999999


Q ss_pred             ccCCcc
Q 024828          234 MYGDLN  239 (262)
Q Consensus       234 ~~~~~~  239 (262)
                      ......
T Consensus       292 ~~~~~~  297 (326)
T 2x7f_A          292 DQPNER  297 (326)
T ss_dssp             CCTTHH
T ss_pred             hCcccc
Confidence            877554


No 91 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=7.8e-44  Score=295.82  Aligned_cols=224  Identities=25%  Similarity=0.453  Sum_probs=181.7

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--------------------------
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--------------------------   62 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--------------------------   62 (262)
                      ....+++.+|++++++++||||+++++++.+.+..++||||++|++|.+++...                          
T Consensus        69 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (345)
T 3hko_A           69 PKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE  148 (345)
T ss_dssp             -CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccc
Confidence            456678999999999999999999999999999999999999999999998521                          


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCC--cEEEEecccccccccCCC--
Q 024828           63 --------------KTIPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRG--EVKITDFGVSAIMASTSG--  124 (262)
Q Consensus        63 --------------~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~--~~~l~df~~~~~~~~~~~--  124 (262)
                                    ..+++..+..++.|++.||+|||+ .|++|+||+|+||+++.++  .++|+|||++........  
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~  227 (345)
T 3hko_A          149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN-QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE  227 (345)
T ss_dssp             HHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-
T ss_pred             ccccccccccccccccccHHHHHHHHHHHHHHHHHHHH-CCccccCCChhhEEEecCCCceEEEeeccccccccccCccc
Confidence                          123677888999999999999999 9999999999999998776  899999999976543221  


Q ss_pred             --CcccccccccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCC--CC
Q 024828          125 --QANTFVGTYNYMSPERISG--GKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSA--PS  198 (262)
Q Consensus       125 --~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  198 (262)
                        ......+++.|+|||.+.+  ..++.++||||||+++|+|++|+.||......       .....+........  ..
T Consensus       228 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~  300 (345)
T 3hko_A          228 YYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA-------DTISQVLNKKLCFENPNY  300 (345)
T ss_dssp             -------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCTTSGGG
T ss_pred             cccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcccccCCccc
Confidence              2234568999999999875  56889999999999999999999999875543       22233333322221  12


Q ss_pred             CCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCccc
Q 024828          199 DQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLNV  240 (262)
Q Consensus       199 ~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~~  240 (262)
                      ..+++++.+||.+||+.||.+|||+.++++||||+...+.-.
T Consensus       301 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~~~~  342 (345)
T 3hko_A          301 NVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIY  342 (345)
T ss_dssp             GGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSSCSS
T ss_pred             ccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChHhhE
Confidence            347899999999999999999999999999999998876543


No 92 
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=6.1e-43  Score=285.67  Aligned_cols=219  Identities=26%  Similarity=0.433  Sum_probs=185.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ...+.+.+|+.++++++||||+++++++.+++..++||||+++++|.+++...+.++...+..++.|++.||.|||+ .|
T Consensus        48 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~  126 (304)
T 2jam_A           48 FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE-NG  126 (304)
T ss_dssp             ----HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            34567889999999999999999999999999999999999999999999988899999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEE---ccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           90 IIHRDLKPSNLLI---NHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        90 i~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      ++|+||+|+||++   +.++.++|+|||.+......  ......+++.|+|||.+.+..++.++|+||||+++|+|++|.
T Consensus       127 i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  204 (304)
T 2jam_A          127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGY  204 (304)
T ss_dssp             CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCC
Confidence            9999999999999   67889999999998654322  223346889999999999888999999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCc
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPP--SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      .||......       .....+..+...  ......+++++.+++.+||..||++|||++++++||||+.....
T Consensus       205 ~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  271 (304)
T 2jam_A          205 PPFYEETES-------KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTAL  271 (304)
T ss_dssp             CTTTTSCHH-------HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSCSC
T ss_pred             CCCCCCCHH-------HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCCcc
Confidence            999775432       233333333322  22235689999999999999999999999999999999876543


No 93 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=2.8e-43  Score=288.19  Aligned_cols=218  Identities=24%  Similarity=0.415  Sum_probs=174.1

Q ss_pred             HHHHHHHHHHhcC---CCCeeEeeceEEEECC-----eEEEEEeecCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHH
Q 024828           13 RQIAQELKINQSS---QCPYVVVCYQSFYSNG-----AISIILEYMDGGSLADFLKKVKT--IPEEYLAAICEQVLKGLL   82 (262)
Q Consensus        13 ~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~i~~~l~~~l~   82 (262)
                      ..+.+|+++++++   +||||+++++++.+..     ..++|||++.+ +|.+++.....  +++..+..++.|++.||+
T Consensus        56 ~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~  134 (308)
T 3g33_A           56 ISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLD  134 (308)
T ss_dssp             HHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHH
Confidence            3455677666666   5999999999998755     58999999975 99999988754  999999999999999999


Q ss_pred             HHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           83 YLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        83 ~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      |||+ .|++|+||||+||+++.++.++|+|||++...... .......+++.|+|||++.+..++.++|||||||++|+|
T Consensus       135 ~lH~-~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  212 (308)
T 3g33_A          135 FLHA-NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM  212 (308)
T ss_dssp             HHHH-TTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHT
T ss_pred             HHHH-CCcccCCCCHHHEEEcCCCCEEEeeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHH
Confidence            9999 99999999999999999999999999998765432 233445789999999999988899999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCC---------------------CCCCCCHHHHHHHHHhhcCCcCCCC
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSA---------------------PSDQFSPEFCSFISACVQKEPQQRL  221 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rp  221 (262)
                      ++|+.||......+...   ..............                     ....+++++.+||.+||+.||.+||
T Consensus       213 ~~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  289 (308)
T 3g33_A          213 FRRKPLFCGNSEADQLG---KIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRI  289 (308)
T ss_dssp             TTSSCSCCCSSHHHHHH---HHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HhCCCCCCCCCHHHHHH---HHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCC
Confidence            99999998765433221   22222111111000                     0135788999999999999999999


Q ss_pred             CHHHHhcCccccccC
Q 024828          222 SAQELMTHPFLKMYG  236 (262)
Q Consensus       222 t~~~~l~h~~~~~~~  236 (262)
                      |++|+|+||||+...
T Consensus       290 t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          290 SAFRALQHSYLHKDE  304 (308)
T ss_dssp             CHHHHHTSTTC----
T ss_pred             CHHHHhcCccccCCC
Confidence            999999999998754


No 94 
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=5.2e-43  Score=304.68  Aligned_cols=218  Identities=25%  Similarity=0.466  Sum_probs=188.2

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ..+.+.+|+.++++++||||+++++++.++...|+||||++|++|.+++.+.+.+++..+..++.|++.||+|||+ .|+
T Consensus        89 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i  167 (504)
T 3q5i_A           89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK-HNI  167 (504)
T ss_dssp             THHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH-TTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCe
Confidence            4578899999999999999999999999999999999999999999999988999999999999999999999999 999


Q ss_pred             eeCCCCCCCEEEccCC---cEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 024828           91 IHRDLKPSNLLINHRG---EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~  167 (262)
                      +|+||+|+||+++.++   .++|+|||++...... .......|++.|+|||.+. ..++.++||||+|+++|+|++|..
T Consensus       168 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~  245 (504)
T 3q5i_A          168 VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYP  245 (504)
T ss_dssp             ECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             EeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCC
Confidence            9999999999998776   6999999999765433 2334557899999999987 468999999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCc
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAP--SDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      ||.+....       +....+..+......  ...+++++.+||.+||..||.+|||++|+|+||||+.....
T Consensus       246 pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~  311 (504)
T 3q5i_A          246 PFGGQNDQ-------DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANN  311 (504)
T ss_dssp             SSCCSSHH-------HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCC
T ss_pred             CCCCCCHH-------HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhc
Confidence            99875432       334444444332211  14688999999999999999999999999999999887654


No 95 
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=6.5e-43  Score=292.43  Aligned_cols=217  Identities=26%  Similarity=0.506  Sum_probs=184.5

Q ss_pred             HHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +..++.+.+|+.+++++ +||||+++++++...+..++||||++|++|.+++.....++...+..++.|++.||.|||+ 
T Consensus       140 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~-  218 (365)
T 2y7j_A          140 EEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA-  218 (365)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence            34467889999999999 8999999999999999999999999999999999988899999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC------CCCCcchhHHHHHHHHHH
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG------GKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~  161 (262)
                      .|++|+||+|+||+++.++.++++|||++...... .......|++.|+|||++.+      ..++.++||||||+++|+
T Consensus       219 ~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~e  297 (365)
T 2y7j_A          219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFT  297 (365)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEECCCCCEEEEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHH
Confidence            99999999999999999999999999998765433 23344678999999998853      357889999999999999


Q ss_pred             HHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          162 CATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAP--SDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       162 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      |++|..||......       .....+..+......  ...+++++.+|+.+||+.||++|||++++++||||++
T Consensus       298 ll~g~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          298 LLAGSPPFWHRRQI-------LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHHSSCSSCCSSHH-------HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHCCCCCCCCCHH-------HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            99999999764332       222333333222111  1367889999999999999999999999999999974


No 96 
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=3.4e-43  Score=284.19  Aligned_cols=220  Identities=26%  Similarity=0.482  Sum_probs=185.0

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ..+.+.+|++++++++||||+++++++.+....++||||+++++|.+++.+.+.++...+..++.|++.||.+||+ .|+
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i  129 (283)
T 3bhy_A           51 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS-KRI  129 (283)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-TTE
T ss_pred             HHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCc
Confidence            3678899999999999999999999999999999999999999999999988899999999999999999999998 999


Q ss_pred             eeCCCCCCCEEEccCC----cEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           91 IHRDLKPSNLLINHRG----EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~----~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      +|+||+|+||+++.++    .++|+|||.+....... ......+++.|+|||.+.+..++.++|+||||+++++|++|.
T Consensus       130 ~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  208 (283)
T 3bhy_A          130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA  208 (283)
T ss_dssp             ECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCChHHEEEecCCCCCCceEEEecccceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCC
Confidence            9999999999998777    79999999987654332 223446889999999999888999999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCC--CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPS--APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      .||......       .....+.......  .....+++.+.+++.+||..||++|||+.++++||||+......
T Consensus       209 ~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~  276 (283)
T 3bhy_A          209 SPFLGETKQ-------ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN  276 (283)
T ss_dssp             CTTCCSSHH-------HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred             CCCCCcchH-------HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence            999875432       2223333222211  11246789999999999999999999999999999998876544


No 97 
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=9e-43  Score=288.35  Aligned_cols=209  Identities=27%  Similarity=0.465  Sum_probs=181.3

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGG-SLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ..+.+.+|++++++++||||+++++++.+.+..++|||++.++ +|.+++.+.+.+++..+..++.|++.||+|||+ .|
T Consensus        72 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~  150 (335)
T 3dls_A           72 KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL-KD  150 (335)
T ss_dssp             TTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence            3446778999999999999999999999999999999998665 999999998899999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECATGQFP  168 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p  168 (262)
                      ++|+||||+||+++.++.++|+|||++....... ......|++.|+|||.+.+..+ +.++||||||+++|+|++|..|
T Consensus       151 ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p  229 (335)
T 3dls_A          151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP  229 (335)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred             eEEeccCHHHEEEcCCCcEEEeecccceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCc
Confidence            9999999999999999999999999987654332 3334578999999999988776 8899999999999999999999


Q ss_pred             CCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          169 YSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      |......             ...  ....+..+++++.+|+.+||+.||.+|||++++++||||+...
T Consensus       230 f~~~~~~-------------~~~--~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          230 FCELEET-------------VEA--AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             CSSGGGG-------------TTT--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             hhhHHHH-------------Hhh--ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence            9763321             111  1122346899999999999999999999999999999997644


No 98 
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.7e-43  Score=306.44  Aligned_cols=220  Identities=26%  Similarity=0.496  Sum_probs=188.4

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ....+.+.+|++++++++||||+++++++.+.+..++||||+.|++|.+++...+.+++..+..++.|++.||.|||+ .
T Consensus        67 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~  145 (484)
T 3nyv_A           67 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK-N  145 (484)
T ss_dssp             SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence            345678999999999999999999999999999999999999999999999998899999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEE---ccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhC
Q 024828           89 HIIHRDLKPSNLLI---NHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        89 ~i~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g  165 (262)
                      |++|+||||+||++   +.++.++|+|||++....... ......|++.|+|||++.+ .++.++||||+|+++|+|++|
T Consensus       146 ~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g  223 (484)
T 3nyv_A          146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG  223 (484)
T ss_dssp             TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHS
T ss_pred             CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHC
Confidence            99999999999999   456789999999987654332 3334578999999999986 689999999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCc
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQPPPSA--PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      .+||......       +....+..+.....  ....+++++.+||.+||+.||.+|||++++|+||||+.....
T Consensus       224 ~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~  291 (484)
T 3nyv_A          224 CPPFNGANEY-------DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE  291 (484)
T ss_dssp             SCSSCCSSHH-------HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-
T ss_pred             CCCCCCCCHH-------HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccccc
Confidence            9999875432       33344444433222  124688999999999999999999999999999999876643


No 99 
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.4e-42  Score=282.57  Aligned_cols=222  Identities=27%  Similarity=0.473  Sum_probs=186.6

Q ss_pred             HHHHHHHHHHHHHHhcCC-CCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKINQSSQ-CPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      +..++.+.+|+++++++. ||||+++++++.++...++||||+++++|.+++.....++...+..++.|++.||.+||+ 
T Consensus        64 ~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-  142 (298)
T 1phk_A           64 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK-  142 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            355678899999999995 999999999999999999999999999999999988899999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCccccc------CCCCCcchhHHHHHHHHHH
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERIS------GGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~------~~~~~~~~Di~slG~~l~~  161 (262)
                      .|++|+||+|+||+++.++.++|+|||.+...... .......++..|+|||.+.      ...++.++|+||||+++++
T Consensus       143 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~  221 (298)
T 1phk_A          143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT  221 (298)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHH
T ss_pred             CCcccCCCCcceEEEcCCCcEEEecccchhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHH
Confidence            99999999999999999999999999998765432 2334456889999999874      4457899999999999999


Q ss_pred             HHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCC--CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          162 CATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPS--APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       162 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      |++|..||......       .....+..+....  .....+++++.+++.+||+.||.+|||++++++||||+......
T Consensus       222 l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~  294 (298)
T 1phk_A          222 LLAGSPPFWHRKQM-------LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE  294 (298)
T ss_dssp             HHHSSCSSCCSSHH-------HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC---
T ss_pred             HHHCCCCCcCccHH-------HHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccchh
Confidence            99999999765432       2223333332221  12246889999999999999999999999999999999876544


No 100
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=2.8e-43  Score=294.21  Aligned_cols=221  Identities=28%  Similarity=0.443  Sum_probs=180.0

Q ss_pred             ccchhHHHHHHHHHHHHHHhcCC-----CCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHHH
Q 024828            4 QMNVEESARRQIAQELKINQSSQ-----CPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICEQ   76 (262)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~~   76 (262)
                      .+.......+.+..|+.+++.+.     ||||+++++++...+..++|||++ +++|.+++....  .++...+..++.|
T Consensus        67 ~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~q  145 (360)
T 3llt_A           67 VVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIE  145 (360)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred             EeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHH
Confidence            33344666778889999999886     999999999999999999999999 889999998764  5999999999999


Q ss_pred             HHHHHHHHhhcCCeeeCCCCCCCEEEcc-------------------------CCcEEEEecccccccccCCCCcccccc
Q 024828           77 VLKGLLYLHHEKHIIHRDLKPSNLLINH-------------------------RGEVKITDFGVSAIMASTSGQANTFVG  131 (262)
Q Consensus        77 l~~~l~~lh~~~~i~H~dl~p~nil~~~-------------------------~~~~~l~df~~~~~~~~~~~~~~~~~~  131 (262)
                      ++.||+|||+ .|++|+||||+||+++.                         ++.++|+|||++.....   ......+
T Consensus       146 i~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~---~~~~~~g  221 (360)
T 3llt_A          146 ILKALNYLRK-MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD---YHGSIIN  221 (360)
T ss_dssp             HHHHHHHHHH-TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS---CCCSCCS
T ss_pred             HHHHHHHHHH-CCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC---CCcCccC
Confidence            9999999999 99999999999999975                         78899999999876432   2334578


Q ss_pred             cccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCC-----------------
Q 024828          132 TYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPP-----------------  194 (262)
Q Consensus       132 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  194 (262)
                      ++.|+|||++.+..++.++|||||||++|+|++|+.||...+..+..    ..+.........                 
T Consensus       222 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  297 (360)
T 3llt_A          222 TRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL----AMMESIIQPIPKNMLYEATKTNGSKYVNK  297 (360)
T ss_dssp             CGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHHTCCCCHHHHHHHTTSGGGGGEET
T ss_pred             cccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHH----HHHHHhcCCCCHHHHhhhhhccCccccCc
Confidence            99999999999989999999999999999999999999875543221    111111111000                 


Q ss_pred             --------C----------------CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccc
Q 024828          195 --------S----------------APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLK  233 (262)
Q Consensus       195 --------~----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~  233 (262)
                              .                ......++.+.+||.+||+.||.+|||++|+|+||||+
T Consensus       298 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          298 DELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             TTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             ccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                    0                00012247788999999999999999999999999996


No 101
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-43  Score=296.12  Aligned_cols=226  Identities=27%  Similarity=0.458  Sum_probs=183.4

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECC------eEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNG------AISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKG   80 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~   80 (262)
                      .++...+++.+|++++++++||||+++++++....      .+|+||||+ +++|.++++. ..++...+..++.|++.|
T Consensus        63 ~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~  140 (367)
T 1cm8_A           63 QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKG  140 (367)
T ss_dssp             SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHH
Confidence            35667788999999999999999999999997653      469999999 7799999987 679999999999999999


Q ss_pred             HHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHHHH
Q 024828           81 LLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGLVL  159 (262)
Q Consensus        81 l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l  159 (262)
                      |+|||+ .|++|+||||+||+++.++.++|+|||++.....   ......++..|+|||++.+ ..++.++|+||+||++
T Consensus       141 L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  216 (367)
T 1cm8_A          141 LRYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM  216 (367)
T ss_dssp             HHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTCEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHH
T ss_pred             HHHHHH-CCccccCcCHHHEEEcCCCCEEEEeeeccccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHH
Confidence            999999 9999999999999999999999999999876543   2334578999999999887 5689999999999999


Q ss_pred             HHHHhCCCCCCCCCccCchhhHHHH--------------------HHHHhcCC--CCCCCCCCCCHHHHHHHHHhhcCCc
Q 024828          160 LECATGQFPYSPPEQQDGWTSFYEL--------------------MEAIVDQP--PPSAPSDQFSPEFCSFISACVQKEP  217 (262)
Q Consensus       160 ~~l~~g~~p~~~~~~~~~~~~~~~~--------------------~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p  217 (262)
                      ++|++|+.||.+.+..+....+...                    ...+....  .........++++.+|+.+||..||
T Consensus       217 ~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP  296 (367)
T 1cm8_A          217 AEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDA  296 (367)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSST
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCCh
Confidence            9999999999876543322221111                    00100000  0011123568999999999999999


Q ss_pred             CCCCCHHHHhcCccccccCCc
Q 024828          218 QQRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       218 ~~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      .+|||++++++||||+...+.
T Consensus       297 ~~R~t~~e~l~hp~f~~~~~~  317 (367)
T 1cm8_A          297 EQRVTAGEALAHPYFESLHDT  317 (367)
T ss_dssp             TTSCCHHHHHHSGGGTTTC--
T ss_pred             hHCCCHHHHhcChHHHhhcCC
Confidence            999999999999999987653


No 102
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=7.8e-43  Score=281.11  Aligned_cols=215  Identities=27%  Similarity=0.471  Sum_probs=177.1

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ..+++.+|+++++.++||||+++++++.+.+..++||||+++++|.+++.+.+.++...+..++.|++.||.+||+ .|+
T Consensus        54 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i  132 (276)
T 2h6d_A           54 VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR-HMV  132 (276)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH-HCS
T ss_pred             HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCC
Confidence            3567899999999999999999999999999999999999999999999988899999999999999999999999 999


Q ss_pred             eeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCC
Q 024828           91 IHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      +|+||+|+||+++.++.++|+|||.+....... ......+++.|+|||.+.+..+ +.++|+||||+++++|++|+.||
T Consensus       133 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  211 (276)
T 2h6d_A          133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF  211 (276)
T ss_dssp             SCCCCCGGGEEECTTSCEEECCCCGGGCCCC--------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCCCChhhEEECCCCCEEEeecccccccCCCc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999987654322 2234467889999999987765 68999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      ......       .....+......  .+..++.++.+++.+||+.||.+|||++++++||||+...
T Consensus       212 ~~~~~~-------~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          212 DDEHVP-------TLFKKIRGGVFY--IPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             CCSSHH-------HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             CCCcHH-------HHHHHhhcCccc--CchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence            764332       223333333222  2346789999999999999999999999999999997643


No 103
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.8e-43  Score=291.60  Aligned_cols=222  Identities=27%  Similarity=0.457  Sum_probs=181.4

Q ss_pred             hhHHHHHHHHHHHHHHhcCCC--CeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQC--PYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      .+....+.+.+|+.++++++|  |||+++++++.++...++|||+. +++|.+++.+.+.++...+..++.|++.||.||
T Consensus        46 ~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~l  124 (343)
T 3dbq_A           46 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI  124 (343)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            356667889999999999976  99999999999999999999965 679999999989999999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccC-----------CCCCcchh
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISG-----------GKYGYKSD  151 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~-----------~~~~~~~D  151 (262)
                      |+ .|++|+||||+||+++ ++.++|+|||++........  ......|++.|+|||++.+           ..++.++|
T Consensus       125 H~-~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D  202 (343)
T 3dbq_A          125 HQ-HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD  202 (343)
T ss_dssp             HH-TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHH
T ss_pred             Hh-CCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhh
Confidence            99 9999999999999995 78899999999976543322  2234578999999999864           56889999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcc
Q 024828          152 IWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPF  231 (262)
Q Consensus       152 i~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~  231 (262)
                      |||||+++|+|++|+.||.....      .................+...++++.+|+.+||+.||.+|||+.++++|||
T Consensus       203 iwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~  276 (343)
T 3dbq_A          203 VWSLGCILYYMTYGKTPFQQIIN------QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY  276 (343)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             HHHHHHHHHHHHhCCCcchhhhh------HHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence            99999999999999999975432      122333344444334444567889999999999999999999999999999


Q ss_pred             ccccCC
Q 024828          232 LKMYGD  237 (262)
Q Consensus       232 ~~~~~~  237 (262)
                      |+....
T Consensus       277 ~~~~~~  282 (343)
T 3dbq_A          277 VQIQTH  282 (343)
T ss_dssp             HHSCCC
T ss_pred             ccccCC
Confidence            986543


No 104
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=1.9e-43  Score=303.98  Aligned_cols=225  Identities=25%  Similarity=0.451  Sum_probs=175.9

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEEC------CeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSN------GAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l   81 (262)
                      +....+++.+|+++++.++||||+++++++...      ...|+||||+++ +|.+.+..  .++...+..++.|++.||
T Consensus       101 ~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL  177 (464)
T 3ttj_A          101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGI  177 (464)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHH
Confidence            566778899999999999999999999999654      457999999976 77777754  589999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHH
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  161 (262)
                      +|||+ .|++|+||||+||+++.++.++|+|||++...... .......+++.|+|||++.+..++.++|||||||++|+
T Consensus       178 ~~lH~-~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  255 (464)
T 3ttj_A          178 KHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  255 (464)
T ss_dssp             HHHHH-TTCCCCCCCGGGEEECTTSCEEECCCCCC-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             HHHHH-CCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            99999 99999999999999999999999999999765432 23345678999999999999899999999999999999


Q ss_pred             HHhCCCCCCCCCccCchhhHHHHH---------------HHHhcCCCCCCCC-------C-----------CCCHHHHHH
Q 024828          162 CATGQFPYSPPEQQDGWTSFYELM---------------EAIVDQPPPSAPS-------D-----------QFSPEFCSF  208 (262)
Q Consensus       162 l~~g~~p~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~-------~-----------~~~~~l~~l  208 (262)
                      |++|+.||.+.+..+.+..+....               .............       .           ..++++.+|
T Consensus       256 ll~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL  335 (464)
T 3ttj_A          256 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL  335 (464)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHH
Confidence            999999998866543332222211               1111111100000       0           014678999


Q ss_pred             HHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          209 ISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       209 i~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      |.+||..||++|||++|+|+||||+.+..
T Consensus       336 l~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  364 (464)
T 3ttj_A          336 LSKMLVIDPAKRISVDDALQHPYINVWYD  364 (464)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred             HHHHcCCChhhCCCHHHHhcChhhhhccC
Confidence            99999999999999999999999987653


No 105
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=6.2e-43  Score=295.73  Aligned_cols=221  Identities=26%  Similarity=0.425  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHh-cCCCCeeEeeceEEEE----CCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHh
Q 024828           13 RQIAQELKINQ-SSQCPYVVVCYQSFYS----NGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus        13 ~~~~~e~~~l~-~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      ..+.+|+.++. ..+||||+++++++..    ...+|+||||++|++|.+++...+  .+++..+..++.|++.||.|||
T Consensus        99 ~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  178 (400)
T 1nxk_A           99 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  178 (400)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34667888774 4589999999999876    567899999999999999998754  5999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEcc---CCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           86 HEKHIIHRDLKPSNLLINH---RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      + .|++|+||||+||+++.   ++.++|+|||++...... .......+++.|+|||++.+..++.++|||||||++|+|
T Consensus       179 ~-~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  256 (400)
T 1nxk_A          179 S-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL  256 (400)
T ss_dssp             H-TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHH
T ss_pred             H-CCccccCcCcceEEEecCCCCccEEEEecccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHH
Confidence            9 99999999999999987   788999999998765432 223455789999999999988899999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      ++|+.||...............+.. .....+......+++++.+||.+||+.||++|||++++++||||....
T Consensus       257 l~g~~pf~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          257 LCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             HHSSCSCCCCTTCSSCCSHHHHHHH-TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             HhCCCCCCCCccccccHHHHHHHHc-CcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            9999999876544322222222221 111122222346899999999999999999999999999999997654


No 106
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1.1e-42  Score=297.26  Aligned_cols=231  Identities=25%  Similarity=0.376  Sum_probs=178.1

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEEC-----CeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSN-----GAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l   81 (262)
                      .+....+++.+|++++++++||||+++++++...     ...|+|||++.+ +|.++++....+++..+..++.||+.||
T Consensus        64 ~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qil~aL  142 (432)
T 3n9x_A           64 EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGE  142 (432)
T ss_dssp             TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHHSSCCCCHHHHHHHHHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            3566778999999999999999999999999776     579999999965 9999999888899999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC----------------------CcccccccccccCcc
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG----------------------QANTFVGTYNYMSPE  139 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~----------------------~~~~~~~~~~y~~PE  139 (262)
                      +|||+ .|++|+||||+||+++.++.++|+|||++........                      ......++..|+|||
T Consensus       143 ~~LH~-~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE  221 (432)
T 3n9x_A          143 NFIHE-SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPE  221 (432)
T ss_dssp             HHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHH
T ss_pred             HHHHH-CCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHH
Confidence            99999 9999999999999999999999999999986543221                      224567899999999


Q ss_pred             cc-cCCCCCcchhHHHHHHHHHHHHhCCCC-----------CCCCCccC----c---------hhhHHHHH---------
Q 024828          140 RI-SGGKYGYKSDIWSLGLVLLECATGQFP-----------YSPPEQQD----G---------WTSFYELM---------  185 (262)
Q Consensus       140 ~~-~~~~~~~~~Di~slG~~l~~l~~g~~p-----------~~~~~~~~----~---------~~~~~~~~---------  185 (262)
                      ++ .+..++.++|||||||++|+|++|..|           |.+.+...    .         .......+         
T Consensus       222 ~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~  301 (432)
T 3n9x_A          222 LILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTE  301 (432)
T ss_dssp             HHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCH
T ss_pred             HHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCH
Confidence            86 445699999999999999999985444           33322100    0         00000000         


Q ss_pred             ------------HHHhcCCCCCC-----CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          186 ------------EAIVDQPPPSA-----PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       186 ------------~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                                  ..+........     ....+++++.+||.+||..||.+|||++|+|+||||+......
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~  372 (432)
T 3n9x_A          302 DDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKK  372 (432)
T ss_dssp             HHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTT
T ss_pred             HHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcc
Confidence                        11111000000     0135789999999999999999999999999999999887544


No 107
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=4.1e-43  Score=285.30  Aligned_cols=227  Identities=33%  Similarity=0.558  Sum_probs=179.7

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHh
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK---TIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++++|.+++....   .++...+..++.|++.||.+||
T Consensus        60 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  139 (295)
T 2clq_A           60 SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH  139 (295)
T ss_dssp             C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH
Confidence            4456789999999999999999999999999999999999999999999998752   4678899999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEcc-CCcEEEEecccccccccCCCCcccccccccccCcccccCCC--CCcchhHHHHHHHHHHH
Q 024828           86 HEKHIIHRDLKPSNLLINH-RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGK--YGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~slG~~l~~l  162 (262)
                      + .|++|+||+|+||+++. ++.++|+|||.+..............++..|+|||.+.+..  ++.++|+||||+++|+|
T Consensus       140 ~-~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l  218 (295)
T 2clq_A          140 D-NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEM  218 (295)
T ss_dssp             H-TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHH
T ss_pred             h-CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHH
Confidence            9 99999999999999987 88999999999877654433344567899999999987643  78999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcccch
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLNVDL  242 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~~~~  242 (262)
                      ++|+.||.......     ............+ ..+..+++++.+++.+||+.||++|||++++++||||+.....+...
T Consensus       219 ~~g~~pf~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~~~~  292 (295)
T 2clq_A          219 ATGKPPFYELGEPQ-----AAMFKVGMFKVHP-EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQ  292 (295)
T ss_dssp             HHTSCTTGGGSSHH-----HHHHHHHHHCCCC-CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--------
T ss_pred             HHCCCCccCCCchh-----HHHHhhccccccc-cccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhccccCCCC
Confidence            99999997543221     1111111122222 23357899999999999999999999999999999999877655443


No 108
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=3.5e-43  Score=285.03  Aligned_cols=232  Identities=37%  Similarity=0.682  Sum_probs=180.5

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK----VKTIPEEYLAAICEQVLKGLLY   83 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~   83 (262)
                      .....+.+.++...++.++||||+++++++.+++..++||||++| +|.+++..    ...+++..+..++.|++.||+|
T Consensus        46 ~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~  124 (290)
T 3fme_A           46 SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH  124 (290)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence            344444555666668889999999999999999999999999976 98877754    4679999999999999999999


Q ss_pred             HhhcC-CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccc----cCCCCCcchhHHHHHHH
Q 024828           84 LHHEK-HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERI----SGGKYGYKSDIWSLGLV  158 (262)
Q Consensus        84 lh~~~-~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~----~~~~~~~~~Di~slG~~  158 (262)
                      ||+ . |++|+||+|+||+++.++.++|+|||++....... ......+++.|+|||.+    .+..++.++|+||+|++
T Consensus       125 lH~-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~i  202 (290)
T 3fme_A          125 LHS-KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT  202 (290)
T ss_dssp             HHH-HSCCCCCCCSGGGCEECTTCCEEBCCC----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHH
T ss_pred             Hhh-cCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHH
Confidence            998 7 99999999999999999999999999987654332 22334688999999996    45568999999999999


Q ss_pred             HHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCc
Q 024828          159 LLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       159 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      +++|++|+.||......      ............+......+++++.+++.+||+.||++|||++++++||||+...+.
T Consensus       203 l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~~  276 (290)
T 3fme_A          203 MIELAILRFPYDSWGTP------FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESK  276 (290)
T ss_dssp             HHHHHHTSCSSCCCSCH------HHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHS
T ss_pred             HHHHHHCCCCccccCch------HHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCccc
Confidence            99999999999764322      122333334444455556789999999999999999999999999999999987777


Q ss_pred             ccchhhHhhh
Q 024828          239 NVDLSEYFTD  248 (262)
Q Consensus       239 ~~~~~~~~~~  248 (262)
                      ...+.++++.
T Consensus       277 ~~~~~~~~~~  286 (290)
T 3fme_A          277 GTDVASFVKL  286 (290)
T ss_dssp             CCCHHHHHHH
T ss_pred             ccCHHHHHHH
Confidence            7666665543


No 109
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=1.8e-42  Score=280.32  Aligned_cols=212  Identities=25%  Similarity=0.347  Sum_probs=177.5

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV----KTIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~----~~~~~~~~~~i~~~l~~~l~   82 (262)
                      +.....++.+|+.++..+ +||||+++++++.+.+..++||||++|++|.+++.+.    +.+++..+..++.|++.||.
T Consensus        50 ~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~  129 (289)
T 1x8b_A           50 GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR  129 (289)
T ss_dssp             TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHH
Confidence            355677888999999999 9999999999999999999999999999999999765    67999999999999999999


Q ss_pred             HHhhcCCeeeCCCCCCCEEEccC-------------------CcEEEEecccccccccCCCCcccccccccccCcccccC
Q 024828           83 YLHHEKHIIHRDLKPSNLLINHR-------------------GEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG  143 (262)
Q Consensus        83 ~lh~~~~i~H~dl~p~nil~~~~-------------------~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  143 (262)
                      |||+ .|++|+||+|+||+++.+                   ..++++|||.+.......    ...++..|+|||.+.+
T Consensus       130 ~lH~-~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~  204 (289)
T 1x8b_A          130 YIHS-MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQE  204 (289)
T ss_dssp             HHHH-TTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTT
T ss_pred             HHHh-CCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcC
Confidence            9999 999999999999999844                   379999999987654322    3358899999999987


Q ss_pred             C-CCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCC
Q 024828          144 G-KYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLS  222 (262)
Q Consensus       144 ~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  222 (262)
                      . .++.++||||||+++++|++|.+++....          ....+..+..+.. +..+++++.+++.+||+.||++|||
T Consensus       205 ~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps  273 (289)
T 1x8b_A          205 NYTHLPKADIFALALTVVCAAGAEPLPRNGD----------QWHEIRQGRLPRI-PQVLSQEFTELLKVMIHPDPERRPS  273 (289)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----------HHHHHHTTCCCCC-SSCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCchhhHHHHHHHHHHHhcCCCCCcchh----------HHHHHHcCCCCCC-CcccCHHHHHHHHHHhCCCcccCCC
Confidence            6 46689999999999999999987765431          1233334443333 3578999999999999999999999


Q ss_pred             HHHHhcCcccccc
Q 024828          223 AQELMTHPFLKMY  235 (262)
Q Consensus       223 ~~~~l~h~~~~~~  235 (262)
                      ++++++||||+..
T Consensus       274 ~~~ll~h~~~~~~  286 (289)
T 1x8b_A          274 AMALVKHSVLLSA  286 (289)
T ss_dssp             HHHHHTCTTC---
T ss_pred             HHHHhhChHhhhh
Confidence            9999999999864


No 110
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=3.2e-43  Score=290.18  Aligned_cols=225  Identities=25%  Similarity=0.499  Sum_probs=185.2

Q ss_pred             HHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHh
Q 024828            9 ESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      ......+.+|+.+++.+ +||||+++++++.+.+..++||||+.|++|.+++...  +.+++..+..++.|++.||+|||
T Consensus        69 ~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH  148 (327)
T 3lm5_A           69 QDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH  148 (327)
T ss_dssp             EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            34467889999999999 5699999999999999999999999999999998553  67999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEcc---CCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           86 HEKHIIHRDLKPSNLLINH---RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      + .|++|+||+|+||+++.   ++.++|+|||++....... ......+++.|+|||++.+..++.++|+||||+++|+|
T Consensus       149 ~-~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  226 (327)
T 3lm5_A          149 Q-NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYML  226 (327)
T ss_dssp             H-TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             H-CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHH
Confidence            9 99999999999999987   7899999999997654332 22345789999999999988999999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCccc
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLNV  240 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~~  240 (262)
                      ++|+.||......+.    ...+... ....+......+++.+.+|+.+||+.||.+|||++++++||||+.......
T Consensus       227 l~g~~pf~~~~~~~~----~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~~  299 (327)
T 3lm5_A          227 LTHTSPFVGEDNQET----YLNISQV-NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENL  299 (327)
T ss_dssp             HHSSCSSCCSSHHHH----HHHHHHT-CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTTCC
T ss_pred             HhCCCCCCCCCchHH----HHHHHhc-ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccccccc
Confidence            999999987544321    1111111 222233333578999999999999999999999999999999998876554


No 111
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-43  Score=293.80  Aligned_cols=221  Identities=24%  Similarity=0.387  Sum_probs=183.1

Q ss_pred             HHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           12 RRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      .+.+.+|++++++++||||+++++++.+.+..++||||+.+ +|.+++... ..++...+..++.|++.||+|||+ .|+
T Consensus        56 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i  133 (346)
T 1ua2_A           56 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ-HWI  133 (346)
T ss_dssp             CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             hHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH-CCE
Confidence            35788999999999999999999999999999999999977 999988765 368999999999999999999999 999


Q ss_pred             eeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCC
Q 024828           91 IHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGG-KYGYKSDIWSLGLVLLECATGQFPY  169 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~  169 (262)
                      +|+||+|+||+++.++.++|+|||++..............+++.|+|||.+.+. .++.++||||||+++|+|++|.+||
T Consensus       134 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~  213 (346)
T 1ua2_A          134 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL  213 (346)
T ss_dssp             CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence            999999999999999999999999998765555455556789999999999765 4889999999999999999999999


Q ss_pred             CCCCccCchhhHHHHHHHHhcCCCCCC----------------------CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHh
Q 024828          170 SPPEQQDGWTSFYELMEAIVDQPPPSA----------------------PSDQFSPEFCSFISACVQKEPQQRLSAQELM  227 (262)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l  227 (262)
                      ......+.   ................                      ....+++++.+||.+||..||.+|||++|++
T Consensus       214 ~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  290 (346)
T 1ua2_A          214 PGDSDLDQ---LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL  290 (346)
T ss_dssp             CCSSHHHH---HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred             CCCCHHHH---HHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHh
Confidence            87654322   1222222211110000                      0135678999999999999999999999999


Q ss_pred             cCccccccCC
Q 024828          228 THPFLKMYGD  237 (262)
Q Consensus       228 ~h~~~~~~~~  237 (262)
                      +||||+..+.
T Consensus       291 ~h~~f~~~~~  300 (346)
T 1ua2_A          291 KMKYFSNRPG  300 (346)
T ss_dssp             TSGGGTSSSC
T ss_pred             cChhhhcCCC
Confidence            9999987653


No 112
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=3.3e-43  Score=302.66  Aligned_cols=230  Identities=22%  Similarity=0.321  Sum_probs=176.1

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEEC-----CeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSN-----GAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~   82 (262)
                      +....+++.+|+++|++++||||+++++++...     ...|+|||++. ++|.+++.....+++..+..++.||+.||+
T Consensus        92 ~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~  170 (458)
T 3rp9_A           92 DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVK  170 (458)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHH
Confidence            566778899999999999999999999998543     56999999995 599999998888999999999999999999


Q ss_pred             HHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC---------------------------CCcccccccccc
Q 024828           83 YLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS---------------------------GQANTFVGTYNY  135 (262)
Q Consensus        83 ~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~---------------------------~~~~~~~~~~~y  135 (262)
                      |||+ .|++|+||||+|||++.++.++|+|||++.......                           ......+||+.|
T Consensus       171 ~LH~-~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  249 (458)
T 3rp9_A          171 YVHS-AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWY  249 (458)
T ss_dssp             HHHH-TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTT
T ss_pred             HHHh-CCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccc
Confidence            9999 999999999999999999999999999997654221                           122334679999


Q ss_pred             cCcccc-cCCCCCcchhHHHHHHHHHHHHh-----------CCCCCCCCCccCc----------------hhhHHHHHHH
Q 024828          136 MSPERI-SGGKYGYKSDIWSLGLVLLECAT-----------GQFPYSPPEQQDG----------------WTSFYELMEA  187 (262)
Q Consensus       136 ~~PE~~-~~~~~~~~~Di~slG~~l~~l~~-----------g~~p~~~~~~~~~----------------~~~~~~~~~~  187 (262)
                      +|||++ .+..++.++|||||||++|+|++           |+++|.+......                .......+..
T Consensus       250 ~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  329 (458)
T 3rp9_A          250 RAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFN  329 (458)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHH
T ss_pred             cChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHH
Confidence            999986 45569999999999999999998           6666655431100                0001111111


Q ss_pred             Hh--------------------cCCCC------CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          188 IV--------------------DQPPP------SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       188 ~~--------------------~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      +.                    .....      .......++++.+||.+||..||++|||++|+|+||||+......
T Consensus       330 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~  407 (458)
T 3rp9_A          330 ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAE  407 (458)
T ss_dssp             HHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGG
T ss_pred             HcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCc
Confidence            10                    00000      001134589999999999999999999999999999999886543


No 113
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=1.3e-42  Score=289.13  Aligned_cols=224  Identities=24%  Similarity=0.376  Sum_probs=179.6

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEE--------CCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYS--------NGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l   81 (262)
                      ....+.+|++++++++||||+++++++.+        ++..++||||+.+ +|.+.+... ..++...+..++.|++.||
T Consensus        59 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l  137 (351)
T 3mi9_A           59 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGL  137 (351)
T ss_dssp             SCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            34577899999999999999999999987        4568999999976 888777654 5799999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccC----CCCcccccccccccCcccccCC-CCCcchhHHHHH
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMAST----SGQANTFVGTYNYMSPERISGG-KYGYKSDIWSLG  156 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG  156 (262)
                      +|||+ .|++|+||||+||+++.++.++|+|||++......    ........+++.|+|||++.+. .++.++||||||
T Consensus       138 ~~LH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  216 (351)
T 3mi9_A          138 YYIHR-NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAG  216 (351)
T ss_dssp             HHHHH-TTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHH
T ss_pred             HHHHH-CCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHH
Confidence            99999 99999999999999999999999999998765422    1222345678999999998764 579999999999


Q ss_pred             HHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCC---------------------------CCCHHHHHHH
Q 024828          157 LVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSD---------------------------QFSPEFCSFI  209 (262)
Q Consensus       157 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li  209 (262)
                      +++++|++|+.||......+.    ...+........+.....                           ..++++.+||
T Consensus       217 ~il~ell~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  292 (351)
T 3mi9_A          217 CIMAEMWTRSPIMQGNTEQHQ----LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI  292 (351)
T ss_dssp             HHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHH
Confidence            999999999999987654322    222222222222211111                           0267799999


Q ss_pred             HHhhcCCcCCCCCHHHHhcCccccccCCccc
Q 024828          210 SACVQKEPQQRLSAQELMTHPFLKMYGDLNV  240 (262)
Q Consensus       210 ~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~~  240 (262)
                      .+||+.||.+|||++|+++||||+.......
T Consensus       293 ~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~  323 (351)
T 3mi9_A          293 DKLLVLDPAQRIDSDDALNHDFFWSDPMPSD  323 (351)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGGSSSCCCC
T ss_pred             HHHhcCChhhCCCHHHHhCCCCcCCCCCccc
Confidence            9999999999999999999999987665443


No 114
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=6.1e-43  Score=285.28  Aligned_cols=223  Identities=32%  Similarity=0.606  Sum_probs=183.0

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ....+++.+|+++++.++||||+++++++.+++..++||||+++++|.+++.. .+.++...+..++.|++.||.|||+ 
T Consensus        57 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-  135 (302)
T 2j7t_A           57 EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS-  135 (302)
T ss_dssp             -CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc-
Confidence            34467889999999999999999999999999999999999999999999876 4679999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccc-----cCCCCCcchhHHHHHHHHHHH
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERI-----SGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~-----~~~~~~~~~Di~slG~~l~~l  162 (262)
                      .|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+     .+..++.++|+||||+++++|
T Consensus       136 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l  215 (302)
T 2j7t_A          136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM  215 (302)
T ss_dssp             TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHH
Confidence            999999999999999999999999999875443322233345688999999998     356689999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPP-PSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      ++|..||......       ........... ....+..++.++.+++.+||+.||.+|||++++++||||+......
T Consensus       216 ~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~  286 (302)
T 2j7t_A          216 AQIEPPHHELNPM-------RVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNK  286 (302)
T ss_dssp             HHSSCTTTTSCHH-------HHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCCH
T ss_pred             hcCCCCCccCCHH-------HHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccch
Confidence            9999999875432       22222222222 2223456789999999999999999999999999999999877643


No 115
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=1.1e-42  Score=293.36  Aligned_cols=222  Identities=27%  Similarity=0.471  Sum_probs=182.0

Q ss_pred             hhHHHHHHHHHHHHHHhcCC--CCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQ--CPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      .+....+.+.+|++++++++  ||||+++++++..++..|+|||+ .+++|.+++.+.+.++...+..++.|++.||.||
T Consensus        93 ~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~l  171 (390)
T 2zmd_A           93 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI  171 (390)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEEC-CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEec-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            35667788999999999996  59999999999999999999995 5779999999988999999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccC-----------CCCCcchh
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISG-----------GKYGYKSD  151 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~-----------~~~~~~~D  151 (262)
                      |+ .|++|+||||+||+++ ++.++|+|||++........  ......|++.|+|||++.+           ..++.++|
T Consensus       172 H~-~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D  249 (390)
T 2zmd_A          172 HQ-HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSD  249 (390)
T ss_dssp             HT-TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHH
T ss_pred             HH-CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhh
Confidence            98 9999999999999994 68899999999976543221  2234578999999999865           35889999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcc
Q 024828          152 IWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPF  231 (262)
Q Consensus       152 i~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~  231 (262)
                      ||||||++|+|++|+.||......      ......+.........+...++++.+|+.+||+.||.+|||+.++++|||
T Consensus       250 iwSlGvil~ell~G~~Pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~  323 (390)
T 2zmd_A          250 VWSLGCILYYMTYGKTPFQQIINQ------ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY  323 (390)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             HHHHHHHHHHHHHCCCcchhhhHH------HHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence            999999999999999999754321      12333444444333334556889999999999999999999999999999


Q ss_pred             ccccCC
Q 024828          232 LKMYGD  237 (262)
Q Consensus       232 ~~~~~~  237 (262)
                      |+....
T Consensus       324 ~~~~~~  329 (390)
T 2zmd_A          324 VQIQTH  329 (390)
T ss_dssp             HHSCC-
T ss_pred             ccccCc
Confidence            986654


No 116
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=1.1e-42  Score=285.05  Aligned_cols=213  Identities=26%  Similarity=0.404  Sum_probs=173.6

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      ......+..+|+..+.++ +||||+++++++.+++..++|||++ +++|.+++...+ .+++..+..++.|++.||+|||
T Consensus        96 ~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  174 (311)
T 3p1a_A           96 GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH  174 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344555556666655555 9999999999999999999999999 559999887654 6999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhC
Q 024828           86 HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g  165 (262)
                      + .|++|+||||+||+++.++.++|+|||++....... ......|++.|+|||++.+ .++.++||||||+++++|++|
T Consensus       175 ~-~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g  251 (311)
T 3p1a_A          175 S-QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACN  251 (311)
T ss_dssp             H-TTEECCCCSGGGEEECGGGCEEECCCTTCEECC-------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHT
T ss_pred             H-CCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhC
Confidence            9 999999999999999999999999999987654332 3334568999999999886 789999999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      ..++....          ....+..+..+......+++++.+|+.+||+.||++|||++++++||||+.
T Consensus       252 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          252 MELPHGGE----------GWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             CCCCSSHH----------HHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             CCCCCCcc----------HHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            76664421          122333333333334568999999999999999999999999999999975


No 117
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=6.9e-43  Score=290.42  Aligned_cols=219  Identities=32%  Similarity=0.521  Sum_probs=185.6

Q ss_pred             HHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHH------HHh--cCCCCHHHHHHHHHHHHHHHHHH
Q 024828           13 RQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADF------LKK--VKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus        13 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~------l~~--~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      +.+.+|++++++++||||+++++++.+.+..++||||+++++|.++      +.+  ...++...+..++.|++.||.||
T Consensus        88 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l  167 (348)
T 2pml_X           88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI  167 (348)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999999999999998      665  56799999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCC-CCCc-chhHHHHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGG-KYGY-KSDIWSLGLVLLEC  162 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~-~~Di~slG~~l~~l  162 (262)
                      |+..|++|+||+|+||+++.++.++|+|||.+......  ......++..|+|||.+.+. .++. ++|+||||+++++|
T Consensus       168 H~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l  245 (348)
T 2pml_X          168 HNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM  245 (348)
T ss_dssp             HHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHH
T ss_pred             hccCCEeecCCChHhEEEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHH
Confidence            96489999999999999999999999999998765433  33345688999999999887 5655 99999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCC-----------------CCCCCHHHHHHHHHhhcCCcCCCCCHHH
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAP-----------------SDQFSPEFCSFISACVQKEPQQRLSAQE  225 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~  225 (262)
                      ++|..||......      .+....+..+......                 ...+++++.+|+.+||+.||.+|||+++
T Consensus       246 ~~g~~pf~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e  319 (348)
T 2pml_X          246 FYNVVPFSLKISL------VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSED  319 (348)
T ss_dssp             HHSSCSSCCSSCS------HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HhCCCCCCCCCcH------HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHH
Confidence            9999999876542      1333444433322221                 1468899999999999999999999999


Q ss_pred             HhcCccccccCCcc
Q 024828          226 LMTHPFLKMYGDLN  239 (262)
Q Consensus       226 ~l~h~~~~~~~~~~  239 (262)
                      +++||||+......
T Consensus       320 ~l~hp~f~~~~~~~  333 (348)
T 2pml_X          320 ALKHEWLADTNIED  333 (348)
T ss_dssp             HHTSGGGTTCCHHH
T ss_pred             HhcCccccCCCHHH
Confidence            99999999876444


No 118
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=4.2e-43  Score=283.08  Aligned_cols=220  Identities=30%  Similarity=0.521  Sum_probs=184.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE--CCeEEEEEeecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYS--NGAISIILEYMDGGSLADFLKKV----KTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~----~~~~~~~~~~i~~~l~~~l   81 (262)
                      ++..++.+.+|++++++++||||+++++++.+  +...++||||+++++|.+++...    ..++...+..++.|++.||
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l  124 (279)
T 2w5a_A           45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL  124 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHH
Confidence            56678899999999999999999999998854  56899999999999999999764    3499999999999999999


Q ss_pred             HHHhhcCC-----eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHH
Q 024828           82 LYLHHEKH-----IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLG  156 (262)
Q Consensus        82 ~~lh~~~~-----i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  156 (262)
                      ++||+ .|     ++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+..++.++|+||||
T Consensus       125 ~~lH~-~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  203 (279)
T 2w5a_A          125 KECHR-RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG  203 (279)
T ss_dssp             HHHHH-HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHH
T ss_pred             HHHhc-ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHH
Confidence            99999 88     9999999999999999999999999987654332222334678899999999988899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          157 LVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       157 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      +++|+|++|+.||......       .....+..+..+.. +..+++++.+++.+||+.||.+|||++++++|+|+.+-.
T Consensus       204 ~il~~l~~g~~p~~~~~~~-------~~~~~i~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          204 CLLYELCALMPPFTAFSQK-------ELAGKIREGKFRRI-PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             HHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             HHHHHHHHCCCCCcccCHH-------HHHHHHhhcccccC-CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence            9999999999999875432       33344444443332 357899999999999999999999999999999997644


No 119
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-42  Score=290.14  Aligned_cols=222  Identities=28%  Similarity=0.497  Sum_probs=185.8

Q ss_pred             HHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           11 ARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ..+.+.+|+++++++ +||||+++++++.++...++||||+++++|.+++...+.++...+..++.|++.||.|||+ .|
T Consensus       101 ~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~  179 (355)
T 1vzo_A          101 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK-LG  179 (355)
T ss_dssp             SGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             HHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            345677899999999 6999999999999999999999999999999999988899999999999999999999998 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccC-CCCcccccccccccCcccccCC--CCCcchhHHHHHHHHHHHHhCC
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMAST-SGQANTFVGTYNYMSPERISGG--KYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      ++|+||||+||+++.++.++|+|||++...... ........|++.|+|||++.+.  .++.++|||||||++|+|++|+
T Consensus       180 ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~  259 (355)
T 1vzo_A          180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA  259 (355)
T ss_dssp             CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS
T ss_pred             cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCC
Confidence            999999999999999999999999998765322 2223345789999999999863  4789999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCC-----CHHHHhcCccccccCCc
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRL-----SAQELMTHPFLKMYGDL  238 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----t~~~~l~h~~~~~~~~~  238 (262)
                      .||..........   ...........+  .+..++..+.+||.+||..||++||     |++++++||||+.....
T Consensus       260 ~pf~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~  331 (355)
T 1vzo_A          260 SPFTVDGEKNSQA---EISRRILKSEPP--YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWD  331 (355)
T ss_dssp             CTTSCTTSCCCHH---HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHH
T ss_pred             CCCccCCccchHH---HHHHHHhccCCC--CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChh
Confidence            9998655443322   233333333222  2356889999999999999999999     99999999999986543


No 120
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.9e-42  Score=280.42  Aligned_cols=225  Identities=22%  Similarity=0.414  Sum_probs=183.9

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ..+...+++.+|+.++++++||||+++++++.+++..++||||++|++|.+++.+.++++...+..++.|++.||+|||+
T Consensus        50 ~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~  129 (294)
T 4eqm_A           50 EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD  129 (294)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35677789999999999999999999999999999999999999999999999998999999999999999999999998


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC-CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhC
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g  165 (262)
                       .|++|+||+|+||+++.++.++|+|||++....... .......|++.|+|||.+.+..++.++|+||||+++|+|++|
T Consensus       130 -~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g  208 (294)
T 4eqm_A          130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG  208 (294)
T ss_dssp             -TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred             -CCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhC
Confidence             999999999999999999999999999987654332 222335689999999999998899999999999999999999


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCCCCC---CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQPPPS---APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      +.||......       ...........+.   .....+++.+.+++.+||..||.+||+..+.+.++|.+...+..
T Consensus       209 ~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~  278 (294)
T 4eqm_A          209 EPPFNGETAV-------SIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR  278 (294)
T ss_dssp             SCSSCSSCHH-------HHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred             CCCCCCCChH-------HHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence            9999875432       1222222222221   12356889999999999999999999777777777766555443


No 121
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=4e-42  Score=281.21  Aligned_cols=222  Identities=24%  Similarity=0.411  Sum_probs=177.5

Q ss_pred             chhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 024828            6 NVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         6 ~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      ..+....+.+.+|++++++++||||+++++++. .+..++||||+.|++|.+++.. ...++...+..++.|++.||+||
T Consensus        70 ~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L  148 (307)
T 3lb7_A           70 DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL  148 (307)
T ss_dssp             SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            346677789999999999999999999999765 4558999999999999999974 46799999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEeccccccccc--CCCCcccccccccccCccccc---CCCCCcchhHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMAS--TSGQANTFVGTYNYMSPERIS---GGKYGYKSDIWSLGLVL  159 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~--~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l  159 (262)
                      |+ .|++|+||+|+||+++.++.++|+|||++.....  .........|+..|+|||.+.   +..++.++||||||+++
T Consensus       149 H~-~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il  227 (307)
T 3lb7_A          149 HA-KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL  227 (307)
T ss_dssp             HH-TTCCCSCCCSSSEEECTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHH
T ss_pred             Hh-CCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHH
Confidence            99 9999999999999999999999999999875432  122233457899999999986   55688999999999999


Q ss_pred             HHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccc
Q 024828          160 LECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFL  232 (262)
Q Consensus       160 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~  232 (262)
                      |+|++|+.||......+   .....................+++++.+|+.+||+.+|++|||+.+++++.+.
T Consensus       228 ~elltg~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~  297 (307)
T 3lb7_A          228 YELMTGELPYSHINNRD---QIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL  297 (307)
T ss_dssp             HHHHHSSCTTTTCCCHH---HHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred             HHHHhCCCCCccCCcHH---HHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence            99999999998755432   11111111111112222335789999999999999999999999999988654


No 122
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=1.1e-42  Score=283.68  Aligned_cols=222  Identities=34%  Similarity=0.630  Sum_probs=167.8

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh--------cCCCCHHHHHHHHHHHHHH
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK--------VKTIPEEYLAAICEQVLKG   80 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~--------~~~~~~~~~~~i~~~l~~~   80 (262)
                      ....+++.+|++++++++||||+++++++.+.+..++||||++|++|.+++..        .+.++...+..++.|++.|
T Consensus        54 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  133 (303)
T 2vwi_A           54 QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG  133 (303)
T ss_dssp             ------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHH
Confidence            44567888999999999999999999999999999999999999999999974        3568999999999999999


Q ss_pred             HHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC-----CCcccccccccccCcccccC-CCCCcchhHHH
Q 024828           81 LLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-----GQANTFVGTYNYMSPERISG-GKYGYKSDIWS  154 (262)
Q Consensus        81 l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~s  154 (262)
                      |.|||+ .|++|+||+|+||+++.++.++|+|||.+.......     .......+++.|+|||.+.+ ..++.++|+||
T Consensus       134 l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s  212 (303)
T 2vwi_A          134 LEYLHK-NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWS  212 (303)
T ss_dssp             HHHHHH-TTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHH
T ss_pred             HHHHHh-CCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHH
Confidence            999999 999999999999999999999999999886553321     11233468899999999875 45889999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCC--------CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHH
Q 024828          155 LGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPP--------SAPSDQFSPEFCSFISACVQKEPQQRLSAQEL  226 (262)
Q Consensus       155 lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~  226 (262)
                      ||+++|+|++|+.||........      ..... ....+        ......+++++.+++.+||+.||.+|||+.++
T Consensus       213 lG~il~~l~~g~~pf~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  285 (303)
T 2vwi_A          213 FGITAIELATGAAPYHKYPPMKV------LMLTL-QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL  285 (303)
T ss_dssp             HHHHHHHHHHSSCTTTTSCGGGH------HHHHH-TSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             HHHHHHHHHhCCCCCccCchhhH------HHHHh-ccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHH
Confidence            99999999999999987654321      11111 11111        11224678999999999999999999999999


Q ss_pred             hcCccccccCCc
Q 024828          227 MTHPFLKMYGDL  238 (262)
Q Consensus       227 l~h~~~~~~~~~  238 (262)
                      ++||||+.....
T Consensus       286 l~h~~~~~~~~~  297 (303)
T 2vwi_A          286 LRHKFFQKAKNK  297 (303)
T ss_dssp             HTSTTC------
T ss_pred             hhChhhhcCCCC
Confidence            999999887654


No 123
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=9.3e-42  Score=285.44  Aligned_cols=227  Identities=23%  Similarity=0.423  Sum_probs=183.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEEC-----CeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSN-----GAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~   82 (262)
                      .....+++.+|++++++++||||+++++++...     ...++|||++.+ +|.++++. +.++...+..++.|++.||+
T Consensus        65 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~-~~~~~~~~~~i~~qi~~aL~  142 (364)
T 3qyz_A           65 HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT-QHLSNDHICYFLYQILRGLK  142 (364)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccCc-CHHHHHHh-CCCCHHHHHHHHHHHHHHHH
Confidence            456668899999999999999999999998764     468999999975 99999976 56999999999999999999


Q ss_pred             HHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC---CcccccccccccCcccccCC-CCCcchhHHHHHHH
Q 024828           83 YLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG---QANTFVGTYNYMSPERISGG-KYGYKSDIWSLGLV  158 (262)
Q Consensus        83 ~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~  158 (262)
                      |||+ .|++|+||+|+||+++.++.++|+|||++........   ......+++.|+|||++.+. .++.++||||||++
T Consensus       143 ~LH~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  221 (364)
T 3qyz_A          143 YIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI  221 (364)
T ss_dssp             HHHH-TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHH
T ss_pred             HHHH-CCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHH
Confidence            9999 9999999999999999999999999999976543322   12345789999999987654 48999999999999


Q ss_pred             HHHHHhCCCCCCCCCccCchhhHHHHH-----------------HHHhcCCCCCC-----CCCCCCHHHHHHHHHhhcCC
Q 024828          159 LLECATGQFPYSPPEQQDGWTSFYELM-----------------EAIVDQPPPSA-----PSDQFSPEFCSFISACVQKE  216 (262)
Q Consensus       159 l~~l~~g~~p~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~~  216 (262)
                      +|+|++|+.||......+....+....                 ...........     ....+++++.+||.+||+.|
T Consensus       222 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  301 (364)
T 3qyz_A          222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN  301 (364)
T ss_dssp             HHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCC
Confidence            999999999998776554332222110                 00000000000     01357899999999999999


Q ss_pred             cCCCCCHHHHhcCccccccCC
Q 024828          217 PQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       217 p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      |.+|||++|+++||||+.+..
T Consensus       302 P~~R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          302 PHKRIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             TTTSCCHHHHHTSGGGTTTCC
T ss_pred             hhhCCCHHHHhcCcchhhccC
Confidence            999999999999999998744


No 124
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.1e-42  Score=294.96  Aligned_cols=225  Identities=21%  Similarity=0.404  Sum_probs=169.1

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEE--CCeEEEEEeecCCCCHHHHHHhc---------CCCCHHHHHHHHHHHHH
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYS--NGAISIILEYMDGGSLADFLKKV---------KTIPEEYLAAICEQVLK   79 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~---------~~~~~~~~~~i~~~l~~   79 (262)
                      ....+.+|+.++++++||||+++++++.+  +...++||||+.+ +|.+++...         ..+++..+..++.||+.
T Consensus        61 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~  139 (405)
T 3rgf_A           61 ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD  139 (405)
T ss_dssp             CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999965  6789999999976 998888632         24999999999999999


Q ss_pred             HHHHHhhcCCeeeCCCCCCCEEE----ccCCcEEEEecccccccccCC---CCcccccccccccCcccccCC-CCCcchh
Q 024828           80 GLLYLHHEKHIIHRDLKPSNLLI----NHRGEVKITDFGVSAIMASTS---GQANTFVGTYNYMSPERISGG-KYGYKSD  151 (262)
Q Consensus        80 ~l~~lh~~~~i~H~dl~p~nil~----~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~-~~~~~~D  151 (262)
                      ||+|||+ .|++|+||||+||++    +.++.++|+|||++.......   .......|++.|+|||++.+. .++.++|
T Consensus       140 al~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D  218 (405)
T 3rgf_A          140 GIHYLHA-NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAID  218 (405)
T ss_dssp             HHHHHHH-TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHH
T ss_pred             HHHHHHh-CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhh
Confidence            9999999 999999999999999    667899999999997664322   222345789999999999875 4899999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCccC------chhhHHHHHHHHhcCCCCC------------------------------
Q 024828          152 IWSLGLVLLECATGQFPYSPPEQQD------GWTSFYELMEAIVDQPPPS------------------------------  195 (262)
Q Consensus       152 i~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~------------------------------  195 (262)
                      ||||||++|+|++|+.||.......      ...........+.......                              
T Consensus       219 iwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (405)
T 3rgf_A          219 IWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKY  298 (405)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHH
T ss_pred             hHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhh
Confidence            9999999999999999997654321      0111111111111100000                              


Q ss_pred             --CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          196 --APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       196 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                        ......++++.+||.+||..||.+|||++|+|+||||+..+.
T Consensus       299 ~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          299 MEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             HHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             HhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence              000123678999999999999999999999999999987654


No 125
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=8.4e-43  Score=296.71  Aligned_cols=217  Identities=30%  Similarity=0.493  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      ....+.+|++++++++||||+++++++.. ...++||||+.+++|.+++...+.+++..+..++.|++.||+|||+ .|+
T Consensus       183 ~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~i  260 (419)
T 3i6u_A          183 PALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE-NGI  260 (419)
T ss_dssp             --CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCc
Confidence            34468899999999999999999999854 5589999999999999999888899999999999999999999998 999


Q ss_pred             eeCCCCCCCEEEccCC---cEEEEecccccccccCCCCcccccccccccCcccccC---CCCCcchhHHHHHHHHHHHHh
Q 024828           91 IHRDLKPSNLLINHRG---EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG---GKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~~l~~  164 (262)
                      +|+||||+||+++.++   .++|+|||++...... .......|++.|+|||++.+   ..++.++|+||||+++|+|++
T Consensus       261 vHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~llt  339 (419)
T 3i6u_A          261 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS  339 (419)
T ss_dssp             CCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCChHhEEEecCCCcceEEEeecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHH
Confidence            9999999999997654   4999999999765432 23334578999999999864   457889999999999999999


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAP--SDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      |+.||........      ....+..+.....+  ...+++++.+|+.+||+.||.+|||++++++||||+...
T Consensus       340 g~~pf~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  407 (419)
T 3i6u_A          340 GYPPFSEHRTQVS------LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  407 (419)
T ss_dssp             SSCSSCCCSSSCC------HHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHH
T ss_pred             CCCCCCCCcchHH------HHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChh
Confidence            9999987554432      12222233222211  146789999999999999999999999999999998643


No 126
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=2.1e-42  Score=280.25  Aligned_cols=218  Identities=26%  Similarity=0.503  Sum_probs=184.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ...+.+.+|++++++++||||+++++++.+....++|+|++.+++|.+++.+.+.++...+..++.|++.||.+||+ .|
T Consensus        63 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~  141 (287)
T 2wei_A           63 KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK-HN  141 (287)
T ss_dssp             SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             HHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            45678899999999999999999999999999999999999999999999888899999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCC---cEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           90 IIHRDLKPSNLLINHRG---EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      ++|+||+|+||+++.++   .++|+|||++....... ......++..|+|||.+.+ .++.++|+||||+++++|++|.
T Consensus       142 i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~  219 (287)
T 2wei_A          142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGT  219 (287)
T ss_dssp             CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCC
Confidence            99999999999997643   69999999987654332 2233467889999999875 4899999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSA--PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .||......       .....+..+.....  ....+++++.+++.+||..||.+|||++++++||||+...+
T Consensus       220 ~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~  285 (287)
T 2wei_A          220 PPFYGKNEY-------DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (287)
T ss_dssp             CSSCCSSHH-------HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHCC
T ss_pred             CCCCCCCHH-------HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcccc
Confidence            999875432       23333333332221  12468999999999999999999999999999999987654


No 127
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=2.9e-44  Score=301.94  Aligned_cols=211  Identities=17%  Similarity=0.234  Sum_probs=170.4

Q ss_pred             hHHHHHHHHHHH---HHHhcCCCCeeEeec-------eEEEECC-----------------eEEEEEeecCCCCHHHHHH
Q 024828            8 EESARRQIAQEL---KINQSSQCPYVVVCY-------QSFYSNG-----------------AISIILEYMDGGSLADFLK   60 (262)
Q Consensus         8 ~~~~~~~~~~e~---~~l~~l~h~~i~~~~-------~~~~~~~-----------------~~~lv~e~~~~~sL~~~l~   60 (262)
                      .....+.+.+|+   +++++++||||++++       +++.+.+                 ..|+||||+ +++|.+++.
T Consensus       113 ~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~  191 (377)
T 3byv_A          113 PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGE  191 (377)
T ss_dssp             CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHH
Confidence            445678899999   555666899999998       6655543                 388999999 569999998


Q ss_pred             hcCCCCH-------HHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccc
Q 024828           61 KVKTIPE-------EYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTY  133 (262)
Q Consensus        61 ~~~~~~~-------~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  133 (262)
                      +.+.++.       ..+..++.|++.||+|||+ .|++|+||||+||+++.++.++|+|||++.....   ......| +
T Consensus       192 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~  266 (377)
T 3byv_A          192 VLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH-YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-R  266 (377)
T ss_dssp             HHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-T
T ss_pred             hccccccccccccHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-c
Confidence            7655555       8888899999999999999 9999999999999999999999999999875332   2334466 8


Q ss_pred             cccCcccccCC-----------CCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCC
Q 024828          134 NYMSPERISGG-----------KYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFS  202 (262)
Q Consensus       134 ~y~~PE~~~~~-----------~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (262)
                      .|+|||++.+.           .++.++||||||+++|+|++|+.||............       ..      ....++
T Consensus       267 ~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~-------~~------~~~~~~  333 (377)
T 3byv_A          267 GFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI-------FR------SCKNIP  333 (377)
T ss_dssp             TCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGG-------GS------SCCCCC
T ss_pred             CccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhh-------hh------hccCCC
Confidence            99999999877           7899999999999999999999999775543322111       11      124678


Q ss_pred             HHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          203 PEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       203 ~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      +++.+|+.+||+.||++|||+.++++||||+...+
T Consensus       334 ~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~  368 (377)
T 3byv_A          334 QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT  368 (377)
T ss_dssp             HHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHH
Confidence            99999999999999999999999999999987653


No 128
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=1.1e-41  Score=278.98  Aligned_cols=217  Identities=26%  Similarity=0.449  Sum_probs=180.6

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHh
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      .+....+.+.+|++++++++||||+++++++.+++..++||||+++++|.+++.. .+.++...+..++.|++.||+|||
T Consensus        46 ~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  125 (310)
T 3s95_A           46 FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH  125 (310)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3577888999999999999999999999999999999999999999999999987 467999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC--------------cccccccccccCcccccCCCCCcchh
Q 024828           86 HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ--------------ANTFVGTYNYMSPERISGGKYGYKSD  151 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--------------~~~~~~~~~y~~PE~~~~~~~~~~~D  151 (262)
                      + .|++|+||+|+||+++.++.++|+|||++.........              .....|++.|+|||++.+..++.++|
T Consensus       126 ~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  204 (310)
T 3s95_A          126 S-MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVD  204 (310)
T ss_dssp             H-TTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHH
T ss_pred             h-CCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHH
Confidence            9 99999999999999999999999999999765432211              11457899999999999989999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCccCc--hhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          152 IWSLGLVLLECATGQFPYSPPEQQDG--WTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       152 i~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |||||+++|+|++|..|+........  ..........    .    .+..+++++.+++.+||+.||++|||++++++ 
T Consensus       205 i~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~-  275 (310)
T 3s95_A          205 VFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR----Y----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH-  275 (310)
T ss_dssp             HHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH----T----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH-
T ss_pred             HHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc----c----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH-
Confidence            99999999999999999876443221  1111111111    1    12467888999999999999999999999986 


Q ss_pred             ccccc
Q 024828          230 PFLKM  234 (262)
Q Consensus       230 ~~~~~  234 (262)
                       +++.
T Consensus       276 -~L~~  279 (310)
T 3s95_A          276 -WLET  279 (310)
T ss_dssp             -HHHH
T ss_pred             -HHHH
Confidence             4443


No 129
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=1.9e-42  Score=289.60  Aligned_cols=225  Identities=24%  Similarity=0.423  Sum_probs=169.4

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEEC------CeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSN------GAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l   81 (262)
                      +....+++.+|+++++.++||||+++++++...      ...++|+|++ +++|.+++.. +.++...+..++.|++.||
T Consensus        68 ~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL  145 (367)
T 2fst_X           68 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGL  145 (367)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence            456778899999999999999999999998654      5689999999 6799999876 6799999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHHHHH
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~  160 (262)
                      +|||+ .|++|+||||+||+++.++.++|+|||++......   .....++..|+|||.+.+ ..++.++|||||||+++
T Consensus       146 ~~LH~-~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  221 (367)
T 2fst_X          146 KYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA  221 (367)
T ss_dssp             HHHHH-TTCCCCCCCGGGEEECTTCCEEECC------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHH
T ss_pred             HHHHH-CCeeeCCCCHhhEEECCCCCEEEeecccccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHH
Confidence            99999 99999999999999999999999999998764322   334578999999999887 56899999999999999


Q ss_pred             HHHhCCCCCCCCCccCchhhHHHHH----------------HHHhcCCCC--CC----CCCCCCHHHHHHHHHhhcCCcC
Q 024828          161 ECATGQFPYSPPEQQDGWTSFYELM----------------EAIVDQPPP--SA----PSDQFSPEFCSFISACVQKEPQ  218 (262)
Q Consensus       161 ~l~~g~~p~~~~~~~~~~~~~~~~~----------------~~~~~~~~~--~~----~~~~~~~~l~~li~~~l~~~p~  218 (262)
                      +|++|+.||.+.+..+....+....                .........  ..    .....++++.+||.+||..||.
T Consensus       222 ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~  301 (367)
T 2fst_X          222 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD  301 (367)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGG
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcc
Confidence            9999999998765433222221110                000000000  00    0124678899999999999999


Q ss_pred             CCCCHHHHhcCccccccCCc
Q 024828          219 QRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       219 ~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      +|||++++|+||||+.....
T Consensus       302 ~R~t~~e~L~hp~~~~~~~~  321 (367)
T 2fst_X          302 KRITAAQALAHAYFAQYHDP  321 (367)
T ss_dssp             GSCCHHHHHTSGGGTTTCCG
T ss_pred             cCcCHHHHhcChhhhhccCC
Confidence            99999999999999987653


No 130
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=7.3e-42  Score=286.51  Aligned_cols=213  Identities=22%  Similarity=0.413  Sum_probs=181.8

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC----------------CCCHHHH
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK----------------TIPEEYL   70 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------~~~~~~~   70 (262)
                      .+...+++.+|+++++++ +||||+++++++.+.+..|+||||+.|++|.+++...+                .++...+
T Consensus       126 ~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (370)
T 2psq_A          126 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL  205 (370)
T ss_dssp             BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHH
Confidence            456678899999999999 89999999999999999999999999999999998753                3789999


Q ss_pred             HHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCCCCCc
Q 024828           71 AAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGGKYGY  148 (262)
Q Consensus        71 ~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~  148 (262)
                      ..++.|++.||+|||+ .|++|+||||+||+++.++.++|+|||++........  ......+++.|+|||++.+..++.
T Consensus       206 ~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  284 (370)
T 2psq_A          206 VSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH  284 (370)
T ss_dssp             HHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCH
T ss_pred             HHHHHHHHHHHHHHHh-CCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCc
Confidence            9999999999999999 9999999999999999999999999999976543321  223345677899999999888999


Q ss_pred             chhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHh
Q 024828          149 KSDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELM  227 (262)
Q Consensus       149 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l  227 (262)
                      ++||||||+++|+|++ |..||......+       ....+..+..+.. +..+++++.+++.+||+.||.+|||+.+++
T Consensus       285 ~~DvwslG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rpt~~ell  356 (370)
T 2psq_A          285 QSDVWSFGVLMWEIFTLGGSPYPGIPVEE-------LFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLV  356 (370)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCGGG-------HHHHHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHhcCCCCCC-CCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            9999999999999999 999998755432       2333444443333 357899999999999999999999999998


Q ss_pred             cC
Q 024828          228 TH  229 (262)
Q Consensus       228 ~h  229 (262)
                      ++
T Consensus       357 ~~  358 (370)
T 2psq_A          357 ED  358 (370)
T ss_dssp             HH
T ss_pred             HH
Confidence            64


No 131
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=4.2e-42  Score=284.32  Aligned_cols=225  Identities=24%  Similarity=0.429  Sum_probs=181.9

Q ss_pred             ccchhHHHHHHHHHHHHHHhcCCCC------eeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHH
Q 024828            4 QMNVEESARRQIAQELKINQSSQCP------YVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICE   75 (262)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~   75 (262)
                      .........+.+.+|+++++.++|+      +++++++++.+.+..++||||+ +++|.+++...+  +++...+..++.
T Consensus        47 ~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~  125 (339)
T 1z57_A           47 IVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAY  125 (339)
T ss_dssp             EECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred             EEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHH
Confidence            3344556678889999999888654      5999999999999999999999 779999998765  689999999999


Q ss_pred             HHHHHHHHHhhcCCeeeCCCCCCCEEEcc-------------------CCcEEEEecccccccccCCCCccccccccccc
Q 024828           76 QVLKGLLYLHHEKHIIHRDLKPSNLLINH-------------------RGEVKITDFGVSAIMASTSGQANTFVGTYNYM  136 (262)
Q Consensus        76 ~l~~~l~~lh~~~~i~H~dl~p~nil~~~-------------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~  136 (262)
                      |++.||+|||+ .|++|+||+|+||+++.                   ++.++|+|||.+.....   ......++..|+
T Consensus       126 qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~  201 (339)
T 1z57_A          126 QICKSVNFLHS-NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE---HHSTLVSTRHYR  201 (339)
T ss_dssp             HHHHHHHHHHH-TTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS---CCCSSCSCGGGC
T ss_pred             HHHHHHHHHHH-CCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc---ccccccCCcccc
Confidence            99999999999 99999999999999987                   56799999999876432   233457899999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCC----------------------
Q 024828          137 SPERISGGKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPP----------------------  194 (262)
Q Consensus       137 ~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  194 (262)
                      |||.+.+..++.++|+||||+++|+|++|..||...+..+.    ...+.......+.                      
T Consensus       202 aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  277 (339)
T 1z57_A          202 APEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH----LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEH  277 (339)
T ss_dssp             CHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH----HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTT
T ss_pred             ChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCCCHHHHhhccchhHHhhcccccccc
Confidence            99999988899999999999999999999999987554321    1112221111000                      


Q ss_pred             -----------------CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          195 -----------------SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       195 -----------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                                       .......++++.+|+.+||+.||.+|||++|+++||||+...+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  337 (339)
T 1z57_A          278 SSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK  337 (339)
T ss_dssp             SHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred             ccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence                             0011223567899999999999999999999999999997654


No 132
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=3e-43  Score=288.39  Aligned_cols=227  Identities=25%  Similarity=0.448  Sum_probs=182.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECC----eEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNG----AISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLY   83 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~   83 (262)
                      +.....++.+|++++++++||||+++++++....    ..|+||||++|++|.+++...+.++...+..++.|++.||+|
T Consensus        52 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  131 (311)
T 3ork_A           52 DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF  131 (311)
T ss_dssp             SHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence            4566778999999999999999999999987643    359999999999999999988899999999999999999999


Q ss_pred             HhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC---CcccccccccccCcccccCCCCCcchhHHHHHHHHH
Q 024828           84 LHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG---QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        84 lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~  160 (262)
                      ||+ .|++|+||+|+||+++.++.++|+|||++........   ......|++.|+|||++.+..++.++||||||+++|
T Consensus       132 lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~  210 (311)
T 3ork_A          132 SHQ-NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY  210 (311)
T ss_dssp             HHH-TTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             HHH-CCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHH
Confidence            999 9999999999999999999999999999876543321   222346899999999999988999999999999999


Q ss_pred             HHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          161 ECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPP-SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       161 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      +|++|+.||......+      ...........+ ......+++++.+++.+||+.||.+||+..+++.|+|++......
T Consensus       211 ~ll~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~  284 (311)
T 3ork_A          211 EVLTGEPPFTGDSPVS------VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP  284 (311)
T ss_dssp             HHHHSSCSCCCSSHHH------HHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCC
T ss_pred             HHHhCCCCCCCCChHH------HHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCC
Confidence            9999999997754321      111222222211 112346899999999999999999999999999999998765544


Q ss_pred             cc
Q 024828          240 VD  241 (262)
Q Consensus       240 ~~  241 (262)
                      ..
T Consensus       285 ~~  286 (311)
T 3ork_A          285 PE  286 (311)
T ss_dssp             CS
T ss_pred             CC
Confidence            43


No 133
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=5.5e-42  Score=292.43  Aligned_cols=229  Identities=28%  Similarity=0.477  Sum_probs=181.3

Q ss_pred             cccchhHHHHHHHHHHHHHHhcC------CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHH
Q 024828            3 IQMNVEESARRQIAQELKINQSS------QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAIC   74 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~   74 (262)
                      |.+..+....+++.+|+++++.+      +|+||+++++.+......++|||++.+ +|.+++....  .++...+..++
T Consensus       128 K~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~  206 (429)
T 3kvw_A          128 KMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFA  206 (429)
T ss_dssp             EEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHH
T ss_pred             EEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHH
Confidence            44445566667888888888776      678999999999999999999999965 9999998764  49999999999


Q ss_pred             HHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCc--EEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhH
Q 024828           75 EQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGE--VKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDI  152 (262)
Q Consensus        75 ~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~--~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di  152 (262)
                      .|++.||+|||+ .|++|+||||+||+++.++.  ++|+|||++.....   ......+++.|+|||++.+..++.++||
T Consensus       207 ~qi~~aL~~LH~-~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di  282 (429)
T 3kvw_A          207 HSILQCLDALHK-NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ---RVYTYIQSRFYRAPEVILGARYGMPIDM  282 (429)
T ss_dssp             HHHHHHHHHHHH-HTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC---CCCSSCSCGGGCCHHHHHTBCCCTHHHH
T ss_pred             HHHHHHHHHHHH-CCeecCCCCHHHeEEccCCCcceEEeecccceecCC---cccccCCCCCccChHHHhCCCCCchHHH
Confidence            999999999999 99999999999999998887  99999999865432   3334578999999999999889999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCccCchhhHHHHH--------------HHHhcCC-CC-----------------------
Q 024828          153 WSLGLVLLECATGQFPYSPPEQQDGWTSFYELM--------------EAIVDQP-PP-----------------------  194 (262)
Q Consensus       153 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------------~~~~~~~-~~-----------------------  194 (262)
                      |||||++|+|++|..||...+..+....+.+..              ....... .+                       
T Consensus       283 wSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (429)
T 3kvw_A          283 WSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRG  362 (429)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTC
T ss_pred             HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchh
Confidence            999999999999999998766543222221110              0000000 00                       


Q ss_pred             -----C-------CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          195 -----S-------APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       195 -----~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                           .       ......++++.+||.+||++||++|||++|+|+||||+...
T Consensus       363 ~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          363 KLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL  416 (429)
T ss_dssp             CEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred             hccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence                 0       00123478899999999999999999999999999998754


No 134
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=2.4e-42  Score=286.38  Aligned_cols=231  Identities=37%  Similarity=0.708  Sum_probs=187.9

Q ss_pred             HHHHHHHHHHHH-HhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH
Q 024828           10 SARRQIAQELKI-NQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK----VKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus        10 ~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      ....++..|..+ ++.++||||+++++++.+++..++||||+.| +|.+++..    ...+++..+..++.|++.||+||
T Consensus        91 ~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~l  169 (340)
T 3an0_A           91 QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL  169 (340)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            344555555555 7888999999999999999999999999976 99988863    46799999999999999999999


Q ss_pred             hhcC-CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC----CCCCcchhHHHHHHHH
Q 024828           85 HHEK-HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG----GKYGYKSDIWSLGLVL  159 (262)
Q Consensus        85 h~~~-~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~~l  159 (262)
                      |+ . |++|+||+|+||+++.++.++|+|||++....... ......++..|+|||++.+    ..++.++||||||+++
T Consensus       170 H~-~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il  247 (340)
T 3an0_A          170 HS-KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV-AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM  247 (340)
T ss_dssp             HH-HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHH-HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHH
T ss_pred             hh-cCCeecCCCCHHHEEECCCCCEEEeeCCCceeccccc-ccccCCCCccccCccccccccccCCCCchhhHHHHHHHH
Confidence            98 6 99999999999999999999999999987653221 1122468899999999643    3688999999999999


Q ss_pred             HHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          160 LECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       160 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      |+|++|+.||......      ............+......+++++.+|+.+||..||++|||+.++++||||+......
T Consensus       248 ~el~tg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~  321 (340)
T 3an0_A          248 IELAILRFPYDSWGTP------FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKG  321 (340)
T ss_dssp             HHHHHTSCSSCCCSCH------HHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTTSC
T ss_pred             HHHHHCCCCCccccch------HHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccccccc
Confidence            9999999999764322      1222333334444444456899999999999999999999999999999999988888


Q ss_pred             cchhhHhhhh
Q 024828          240 VDLSEYFTDA  249 (262)
Q Consensus       240 ~~~~~~~~~~  249 (262)
                      ..+..+....
T Consensus       322 ~~~~~~~~~~  331 (340)
T 3an0_A          322 TDVASFVKLI  331 (340)
T ss_dssp             CCCHHHHHHH
T ss_pred             cCHHHHHHHh
Confidence            7777665543


No 135
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=1.1e-41  Score=278.14  Aligned_cols=217  Identities=25%  Similarity=0.490  Sum_probs=178.6

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEE--ECCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHh
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFY--SNGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      ...+.+.+|++++++++||||+++++++.  +....++||||+.+ +|.+++...  +.++...+..++.|++.||.|||
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH  126 (305)
T 2wtk_C           48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVC-GMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH  126 (305)
T ss_dssp             THHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSE-EHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccC-CHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH
Confidence            35678999999999999999999999984  45679999999987 588887653  56999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC--CCcccccccccccCcccccCCC--CCcchhHHHHHHHHHH
Q 024828           86 HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGK--YGYKSDIWSLGLVLLE  161 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~slG~~l~~  161 (262)
                      + .|++|+||+|+||+++.++.++|+|||.+.......  .......++..|+|||.+.+..  .+.++|+||||+++|+
T Consensus       127 ~-~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~  205 (305)
T 2wtk_C          127 S-QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYN  205 (305)
T ss_dssp             H-TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHH
T ss_pred             H-CCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHH
Confidence            9 999999999999999999999999999987654221  2223456889999999998654  4789999999999999


Q ss_pred             HHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          162 CATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       162 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      |++|+.||.....       ......+......  .+..+++++.+++.+||+.||.+|||++++++||||+....
T Consensus       206 l~~g~~p~~~~~~-------~~~~~~i~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          206 ITTGLYPFEGDNI-------YKLFENIGKGSYA--IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             HHHSSCSCCCSSH-------HHHHHHHHHCCCC--CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             HHhCCCCCCCchH-------HHHHHHHhcCCCC--CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence            9999999986432       2333334333322  23468999999999999999999999999999999987654


No 136
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=8.3e-42  Score=281.51  Aligned_cols=212  Identities=24%  Similarity=0.378  Sum_probs=179.7

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .+..++.+.+|++++++++||||+++++++.+++..++||||++|++|.+++... +.++...+..++.|++.||+|||+
T Consensus        90 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~  169 (325)
T 3kul_A           90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD  169 (325)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            5667789999999999999999999999999999999999999999999999765 579999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCc---ccccccccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQA---NTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  163 (262)
                       .|++|+||+|+||+++.++.++|+|||++..........   ....++..|+|||.+.+..++.++||||||+++|+|+
T Consensus       170 -~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell  248 (325)
T 3kul_A          170 -LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL  248 (325)
T ss_dssp             -TTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             -CCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHH
Confidence             999999999999999999999999999997654332211   1223466799999999888999999999999999999


Q ss_pred             h-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          164 T-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       164 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      + |..||......       .....+..+..... +..+++++.+|+.+||..||.+|||++++++
T Consensus       249 ~~g~~p~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          249 AYGERPYWNMTNR-------DVISSVEEGYRLPA-PMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             TTSCCTTTTSCHH-------HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCCCcccCCHH-------HHHHHHHcCCCCCC-CCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            9 99999775432       34444444444333 3578999999999999999999999999986


No 137
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.8e-42  Score=276.21  Aligned_cols=216  Identities=24%  Similarity=0.460  Sum_probs=181.2

Q ss_pred             cchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 024828            5 MNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLY   83 (262)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~   83 (262)
                      ...+....+++.+|++++++++||||+++++++.+++..++||||+++++|.+++... +.++...+..++.|++.||++
T Consensus        42 ~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~  121 (269)
T 4hcu_A           42 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY  121 (269)
T ss_dssp             ECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             ecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHH
Confidence            3333334567899999999999999999999999999999999999999999999764 458999999999999999999


Q ss_pred             HhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC-CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           84 LHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        84 lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      ||+ .|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+..++.++|+||+|+++++|
T Consensus       122 lH~-~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  200 (269)
T 4hcu_A          122 LEE-ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV  200 (269)
T ss_dssp             HHH-TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHh-CCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHH
Confidence            998 999999999999999999999999999987553221 122233456789999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          163 AT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       163 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      ++ |+.||......       .....+........ +...++++.+++.+||+.||.+|||+++++++
T Consensus       201 l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          201 FSEGKIPYENRSNS-------EVVEDISTGFRLYK-PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HTTSCCTTTTCCHH-------HHHHHHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hcCCCCCCCCCCHH-------HHHHHHhcCccCCC-CCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            99 99999875432       34444444433333 35679999999999999999999999999875


No 138
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=8.8e-42  Score=281.04  Aligned_cols=224  Identities=22%  Similarity=0.350  Sum_probs=171.2

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeE------EEEEeecCCCCHHHHHHhcC------CCCHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAI------SIILEYMDGGSLADFLKKVK------TIPEEYLAAICE   75 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~------~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~i~~   75 (262)
                      .....+++.+|++++++++||||+++++++.+....      ++||||+.+++|.+++....      .++...+..++.
T Consensus        65 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~  144 (323)
T 3qup_A           65 ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV  144 (323)
T ss_dssp             -CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHH
Confidence            345678899999999999999999999999876554      99999999999999996543      589999999999


Q ss_pred             HHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCCCCCcchhHH
Q 024828           76 QVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGGKYGYKSDIW  153 (262)
Q Consensus        76 ~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  153 (262)
                      |++.||+|||+ .|++|+||||+||+++.++.++|+|||++........  ......++..|+|||.+.+..++.++|||
T Consensus       145 qi~~al~~LH~-~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  223 (323)
T 3qup_A          145 DIACGMEYLSS-RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVW  223 (323)
T ss_dssp             HHHHHHHHHHH-TTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHHHc-CCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchh
Confidence            99999999999 9999999999999999999999999999876543221  12233456789999999988899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCC-------HHH
Q 024828          154 SLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLS-------AQE  225 (262)
Q Consensus       154 slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt-------~~~  225 (262)
                      |||+++|+|++ |..||......+       ....+..+..... ...+++++.+|+.+||+.||.+|||       +++
T Consensus       224 slG~il~ell~~g~~p~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  295 (323)
T 3qup_A          224 AFGVTMWEIMTRGQTPYAGIENAE-------IYNYLIGGNRLKQ-PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN  295 (323)
T ss_dssp             HHHHHHHHHHTTSCCTTTTCCGGG-------HHHHHHTTCCCCC-CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHhCCCCCccccChHH-------HHHHHhcCCCCCC-CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            99999999999 999998765542       2233333333333 3578999999999999999999999       889


Q ss_pred             HhcCccccccCCccc
Q 024828          226 LMTHPFLKMYGDLNV  240 (262)
Q Consensus       226 ~l~h~~~~~~~~~~~  240 (262)
                      ++.|||+.......+
T Consensus       296 ~l~~~~~~~~~~~pl  310 (323)
T 3qup_A          296 ILGHLSVLSTSQDPL  310 (323)
T ss_dssp             HHHC-----------
T ss_pred             HHHHhhhcCCCCCCC
Confidence            999999987665443


No 139
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=4.5e-42  Score=288.01  Aligned_cols=225  Identities=25%  Similarity=0.453  Sum_probs=171.3

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECC------eEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNG------AISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l   81 (262)
                      +....+++.+|+.+++.++||||+++++++....      ..|+||||+++ +|.+.+.  ..++...+..++.|++.||
T Consensus        64 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al  140 (371)
T 2xrw_A           64 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGI  140 (371)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHH
Confidence            4667788999999999999999999999997654      78999999976 8988886  4689999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHH
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  161 (262)
                      .|||+ .|++|+||||+||+++.++.++|+|||++....... ......++..|+|||.+.+..++.++|||||||++|+
T Consensus       141 ~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  218 (371)
T 2xrw_A          141 KHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  218 (371)
T ss_dssp             HHHHH-TTCCCSCCCGGGEEECTTSCEEECCCCC-----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             HHHHH-CCeecccCCHHHEEEcCCCCEEEEEeeccccccccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHH
Confidence            99999 999999999999999999999999999987654322 2334578999999999998889999999999999999


Q ss_pred             HHhCCCCCCCCCccCchhhHHH---------------HHHHHhcCCCCCCC------------C------CCCCHHHHHH
Q 024828          162 CATGQFPYSPPEQQDGWTSFYE---------------LMEAIVDQPPPSAP------------S------DQFSPEFCSF  208 (262)
Q Consensus       162 l~~g~~p~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~------------~------~~~~~~l~~l  208 (262)
                      |++|+.||.+.+..+.+..+..               ..............            +      ...++++.+|
T Consensus       219 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  298 (371)
T 2xrw_A          219 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL  298 (371)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHH
Confidence            9999999987654322211110               00000000000000            0      0014678999


Q ss_pred             HHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          209 ISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       209 i~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      |.+||..||.+|||++|+++||||+.+..
T Consensus       299 i~~mL~~dP~~R~t~~e~l~hp~~~~~~~  327 (371)
T 2xrw_A          299 LSKMLVIDASKRISVDEALQHPYINVWYD  327 (371)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             HHHHCcCChhhCCCHHHHhCCcchhhhcC
Confidence            99999999999999999999999987654


No 140
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.7e-41  Score=276.42  Aligned_cols=225  Identities=26%  Similarity=0.440  Sum_probs=176.5

Q ss_pred             cccchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE-------------CCeEEEEEeecCCCCHHHHHHhcC-CCCHH
Q 024828            3 IQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYS-------------NGAISIILEYMDGGSLADFLKKVK-TIPEE   68 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~   68 (262)
                      |+........+.+.+|++++++++||||+++++.+.+             ....++||||+++++|.+++...+ .++..
T Consensus        37 K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  116 (303)
T 1zy4_A           37 KKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD  116 (303)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHH
T ss_pred             EEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchH
Confidence            3444566777899999999999999999999998865             356899999999999999998654 57889


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccC--------------CCCccccccccc
Q 024828           69 YLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMAST--------------SGQANTFVGTYN  134 (262)
Q Consensus        69 ~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~--------------~~~~~~~~~~~~  134 (262)
                      .+..++.|++.||++||+ .|++|+||+|+||+++.++.++|+|||.+......              ........++..
T Consensus       117 ~~~~i~~qi~~~l~~LH~-~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (303)
T 1zy4_A          117 EYWRLFRQILEALSYIHS-QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAM  195 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CT
T ss_pred             HHHHHHHHHHHHHHHHHh-CCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCccc
Confidence            999999999999999999 99999999999999999999999999998765322              112234468889


Q ss_pred             ccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHH
Q 024828          135 YMSPERISGG-KYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQP--PPSAPSDQFSPEFCSFISA  211 (262)
Q Consensus       135 y~~PE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~  211 (262)
                      |+|||.+.+. .++.++|+||||+++|+|++   ||...      .........+....  .+.......++.+.+++.+
T Consensus       196 y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  266 (303)
T 1zy4_A          196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG------MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRL  266 (303)
T ss_dssp             TSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH------HHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHH
T ss_pred             ccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc------hhHHHHHHhccccccccCccccccchHHHHHHHHH
Confidence            9999999865 58999999999999999997   44432      11222333333322  2233335677889999999


Q ss_pred             hhcCCcCCCCCHHHHhcCccccccCC
Q 024828          212 CVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       212 ~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      ||+.||.+|||++++++||||+....
T Consensus       267 ~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (303)
T 1zy4_A          267 LIDHDPNKRPGARTLLNSGWLPVKHQ  292 (303)
T ss_dssp             HTCSSGGGSCCHHHHHHSSCSCCCCH
T ss_pred             HHhcCcccCcCHHHHhCCCCcCCCCh
Confidence            99999999999999999999976543


No 141
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=2.3e-41  Score=285.71  Aligned_cols=222  Identities=29%  Similarity=0.481  Sum_probs=174.6

Q ss_pred             HHHHHHHhcCCCCeeEeeceEEEECC------eEEEEEeecCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHh
Q 024828           16 AQELKINQSSQCPYVVVCYQSFYSNG------AISIILEYMDGGSLADFLK----KVKTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus        16 ~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~----~~~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      .+|+++++.++||||+++++++...+      ..++||||+.+ ++...+.    ....++...+..++.|++.||+|||
T Consensus        80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH  158 (394)
T 4e7w_A           80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH  158 (394)
T ss_dssp             CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            47999999999999999999986543      38899999987 5544443    3467999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEc-cCCcEEEEecccccccccCCCCcccccccccccCcccccCC-CCCcchhHHHHHHHHHHHH
Q 024828           86 HEKHIIHRDLKPSNLLIN-HRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGG-KYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~  163 (262)
                      + .|++|+||||+||+++ .++.++|+|||++....... ......+++.|+|||.+.+. .++.++||||+||++|+|+
T Consensus       159 ~-~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell  236 (394)
T 4e7w_A          159 S-IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM  236 (394)
T ss_dssp             H-TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             H-CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence            9 9999999999999998 78999999999997654332 33345789999999998765 4899999999999999999


Q ss_pred             hCCCCCCCCCccCchhhHHHHH--------HHH----hcCCCCCC--------CCCCCCHHHHHHHHHhhcCCcCCCCCH
Q 024828          164 TGQFPYSPPEQQDGWTSFYELM--------EAI----VDQPPPSA--------PSDQFSPEFCSFISACVQKEPQQRLSA  223 (262)
Q Consensus       164 ~g~~p~~~~~~~~~~~~~~~~~--------~~~----~~~~~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~  223 (262)
                      +|+.||.+.+..+....+....        ...    .....+..        .....++++.+|+.+||..||.+|||+
T Consensus       237 ~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  316 (394)
T 4e7w_A          237 QGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTA  316 (394)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCH
Confidence            9999998765443222221110        000    00000000        113478899999999999999999999


Q ss_pred             HHHhcCccccccCCccc
Q 024828          224 QELMTHPFLKMYGDLNV  240 (262)
Q Consensus       224 ~~~l~h~~~~~~~~~~~  240 (262)
                      .|+++||||+.......
T Consensus       317 ~e~l~hp~f~~~~~~~~  333 (394)
T 4e7w_A          317 IEALCHPFFDELRTGEA  333 (394)
T ss_dssp             HHHHTSGGGSTTTSSCC
T ss_pred             HHHhcChhhhhhccccc
Confidence            99999999998776544


No 142
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=1.1e-41  Score=280.76  Aligned_cols=230  Identities=23%  Similarity=0.432  Sum_probs=180.1

Q ss_pred             HHHHHHHHHHhcC---CCCeeEeeceEEE-----ECCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHH
Q 024828           13 RQIAQELKINQSS---QCPYVVVCYQSFY-----SNGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus        13 ~~~~~e~~~l~~l---~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~   82 (262)
                      ..+.+|+.+++.+   +||||+++++++.     .....++||||+.| +|.+++....  .++...+..++.|++.||.
T Consensus        56 ~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~  134 (326)
T 1blx_A           56 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLD  134 (326)
T ss_dssp             CTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Confidence            3455677766655   8999999999987     45678999999975 9999998754  4899999999999999999


Q ss_pred             HHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           83 YLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        83 ~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      |||+ .|++|+||+|+||+++.++.++|+|||.+....... ......++..|+|||.+.+..++.++||||||+++|+|
T Consensus       135 ~lH~-~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  212 (326)
T 1blx_A          135 FLHS-HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM  212 (326)
T ss_dssp             HHHH-TTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             HHHH-CCceeccCCHHHeEEcCCCCEEEecCcccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence            9999 999999999999999999999999999987654322 23345688999999999988899999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCC---------------------CCCCCCCCCCHHHHHHHHHhhcCCcCCCC
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQP---------------------PPSAPSDQFSPEFCSFISACVQKEPQQRL  221 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  221 (262)
                      ++|+.||......+...   ..........                     ........+++++.+|+.+||+.||.+||
T Consensus       213 ~~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  289 (326)
T 1blx_A          213 FRRKPLFRGSSDVDQLG---KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI  289 (326)
T ss_dssp             HHSSCSCCCSSHHHHHH---HHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSC
T ss_pred             HcCCCCCCCCCHHHHHH---HHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCC
Confidence            99999998765432211   1111111000                     00111246789999999999999999999


Q ss_pred             CHHHHhcCccccccCCcccchhhHhhh
Q 024828          222 SAQELMTHPFLKMYGDLNVDLSEYFTD  248 (262)
Q Consensus       222 t~~~~l~h~~~~~~~~~~~~~~~~~~~  248 (262)
                      |+.++++||||+......-+.......
T Consensus       290 t~~e~l~hp~~~~~~~~~~~~~~~~~~  316 (326)
T 1blx_A          290 SAYSALSHPYFQDLERCKENLDSHLPP  316 (326)
T ss_dssp             CHHHHHTSGGGTTCCCCCCC-------
T ss_pred             CHHHHhcCccccccchhhhhhccCCCC
Confidence            999999999999988776555544433


No 143
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=5.5e-42  Score=275.07  Aligned_cols=214  Identities=23%  Similarity=0.386  Sum_probs=179.7

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      .+....+++.+|++++++++||||+++++++.++...++||||+++++|.+++...+ .++...+..++.|++.||++||
T Consensus        42 ~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH  121 (268)
T 3sxs_A           42 EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE  121 (268)
T ss_dssp             BTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            333345678999999999999999999999999999999999999999999998764 5999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC-CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           86 HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG-QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                      + .|++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+..++.++|+||||+++++|++
T Consensus       122 ~-~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  200 (268)
T 3sxs_A          122 S-HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS  200 (268)
T ss_dssp             H-TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHT
T ss_pred             H-CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHc
Confidence            9 9999999999999999999999999999876543321 1122345667999999998889999999999999999998


Q ss_pred             -CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          165 -GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       165 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                       |+.||......       ........+..... +...++++.+++.+||+.||.+|||+++++++
T Consensus       201 ~g~~p~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          201 LGKMPYDLYTNS-------EVVLKVSQGHRLYR-PHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             TTCCTTTTSCHH-------HHHHHHHTTCCCCC-CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCccccChH-------HHHHHHHcCCCCCC-CCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             99999765432       23333444433333 35678999999999999999999999999875


No 144
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=6.4e-43  Score=293.17  Aligned_cols=223  Identities=12%  Similarity=0.131  Sum_probs=162.3

Q ss_pred             hHHHHHHHHHHH---HHHhcCCCCeeEeec-------eEEEEC-----------------CeEEEEEeecCCCCHHHHHH
Q 024828            8 EESARRQIAQEL---KINQSSQCPYVVVCY-------QSFYSN-----------------GAISIILEYMDGGSLADFLK   60 (262)
Q Consensus         8 ~~~~~~~~~~e~---~~l~~l~h~~i~~~~-------~~~~~~-----------------~~~~lv~e~~~~~sL~~~l~   60 (262)
                      +....+.+.+|+   ++|+. +||||++++       +++...                 ...|+||||++ ++|.+++.
T Consensus       102 ~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~  179 (371)
T 3q60_A          102 SRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFS  179 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHH
Confidence            456667778884   55555 799988755       444432                 34899999998 69999998


Q ss_pred             hc-CCCCHHHH------HHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccc
Q 024828           61 KV-KTIPEEYL------AAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTY  133 (262)
Q Consensus        61 ~~-~~~~~~~~------~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  133 (262)
                      .. ..++...+      ..++.|++.||+|||+ .|++|+||||+||+++.++.++|+|||++......   .....+++
T Consensus       180 ~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~-~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~  255 (371)
T 3q60_A          180 TLDFVYVFRGDEGILALHILTAQLIRLAANLQS-KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPV  255 (371)
T ss_dssp             HHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCG
T ss_pred             HhccccchhhhhhhhhHHHHHHHHHHHHHHHHH-CCCccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCc
Confidence            64 34455555      6788999999999998 99999999999999999999999999998765422   21345669


Q ss_pred             cccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCc--hhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 024828          134 NYMSPERISG--GKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDG--WTSFYELMEAIVDQPPPSAPSDQFSPEFCSFI  209 (262)
Q Consensus       134 ~y~~PE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  209 (262)
                      .|+|||++.+  ..++.++||||||+++|+|++|+.||........  +....  ................+++++.+||
T Consensus       256 ~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li  333 (371)
T 3q60_A          256 TYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPS--LRVPGTDSLAFGSCTPLPDFVKTLI  333 (371)
T ss_dssp             GGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCC--TTSCCCCSCCCTTSSCCCHHHHHHH
T ss_pred             CCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhh--hhhccccccchhhccCCCHHHHHHH
Confidence            9999999987  5689999999999999999999999987643211  00000  0000011111122247899999999


Q ss_pred             HHhhcCCcCCCCCHHHHhcCccccccCCc
Q 024828          210 SACVQKEPQQRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       210 ~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      .+||+.||++|||++++++||||+...+.
T Consensus       334 ~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  362 (371)
T 3q60_A          334 GRFLNFDRRRRLLPLEAMETPEFLQLQNE  362 (371)
T ss_dssp             HHHTCSSTTTCCCHHHHTTSHHHHHHHHH
T ss_pred             HHHcCCChhhCCCHHHHhcCHHHHHHHHH
Confidence            99999999999999999999999876543


No 145
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=5.1e-42  Score=282.39  Aligned_cols=219  Identities=30%  Similarity=0.480  Sum_probs=178.1

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      .....+.+|++++++++||||+++++++..+. .++||||+++++|.+++...+.++...+..++.|++.||.|||+ .|
T Consensus        57 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~  134 (322)
T 2ycf_A           57 DPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE-NG  134 (322)
T ss_dssp             ----CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             hhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            34456889999999999999999999987655 89999999999999999888899999999999999999999998 99


Q ss_pred             eeeCCCCCCCEEEccCCc---EEEEecccccccccCCCCcccccccccccCccccc---CCCCCcchhHHHHHHHHHHHH
Q 024828           90 IIHRDLKPSNLLINHRGE---VKITDFGVSAIMASTSGQANTFVGTYNYMSPERIS---GGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~---~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~~l~  163 (262)
                      ++|+||+|+||+++.++.   ++|+|||++....... ......++..|+|||.+.   +..++.++|+||||+++|+|+
T Consensus       135 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~  213 (322)
T 2ycf_A          135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL  213 (322)
T ss_dssp             EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH-HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHH
T ss_pred             eeccCCCHHHEEEecCCCCCeEEEccCccceeccccc-ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHH
Confidence            999999999999987664   9999999987653221 122346789999999974   456889999999999999999


Q ss_pred             hCCCCCCCCCccCchhhHHHHHHHHhcCCCCC--CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          164 TGQFPYSPPEQQDGWTSFYELMEAIVDQPPPS--APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       164 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      +|..||..........      ..+..+....  .....+++++.+|+.+||..||++|||++++++||||+....
T Consensus       214 ~g~~pf~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~~  283 (322)
T 2ycf_A          214 SGYPPFSEHRTQVSLK------DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM  283 (322)
T ss_dssp             HSSCSSCSTTCSSCHH------HHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHHH
T ss_pred             hCCCCCcccchHHHHH------HHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHHH
Confidence            9999998765443211      1122222111  112467899999999999999999999999999999987553


No 146
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.9e-41  Score=285.42  Aligned_cols=220  Identities=25%  Similarity=0.436  Sum_probs=174.7

Q ss_pred             HHHHHHHHhcCCCCeeEeeceEEEE--------------------------------------CCeEEEEEeecCCCCHH
Q 024828           15 IAQELKINQSSQCPYVVVCYQSFYS--------------------------------------NGAISIILEYMDGGSLA   56 (262)
Q Consensus        15 ~~~e~~~l~~l~h~~i~~~~~~~~~--------------------------------------~~~~~lv~e~~~~~sL~   56 (262)
                      ..+|+++++.++||||+++++++..                                      +...++||||+++ +|.
T Consensus        47 ~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~  125 (383)
T 3eb0_A           47 KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLH  125 (383)
T ss_dssp             CCHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSE-EHH
T ss_pred             HHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHH
Confidence            3479999999999999999999843                                      3458999999976 877


Q ss_pred             HHHH----hcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEc-cCCcEEEEecccccccccCCCCcccccc
Q 024828           57 DFLK----KVKTIPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLIN-HRGEVKITDFGVSAIMASTSGQANTFVG  131 (262)
Q Consensus        57 ~~l~----~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~  131 (262)
                      +.+.    ..+.++...+..++.|++.||+|||+ .|++|+||||+||+++ .++.++|+|||.+....... ......+
T Consensus       126 ~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~  203 (383)
T 3eb0_A          126 KVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS-LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYIC  203 (383)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT-TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCC
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCccc
Confidence            7665    34679999999999999999999998 9999999999999997 57899999999997654332 3344577


Q ss_pred             cccccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHH--------HHHhc----CCCCCC--
Q 024828          132 TYNYMSPERISGGK-YGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELM--------EAIVD----QPPPSA--  196 (262)
Q Consensus       132 ~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~----~~~~~~--  196 (262)
                      +..|+|||.+.+.. ++.++||||+||++|+|++|+.||.+....+....+....        .....    ...+..  
T Consensus       204 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~  283 (383)
T 3eb0_A          204 SRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKA  283 (383)
T ss_dssp             CSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCC
T ss_pred             CCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCc
Confidence            89999999988754 8999999999999999999999998765543222221110        00000    000000  


Q ss_pred             ------CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          197 ------PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       197 ------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                            .+...++++.+|+.+||..||.+|||+.|+++||||+....
T Consensus       284 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (383)
T 3eb0_A          284 KDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN  330 (383)
T ss_dssp             CCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred             ccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence                  12357889999999999999999999999999999987754


No 147
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=2.2e-41  Score=277.40  Aligned_cols=213  Identities=25%  Similarity=0.438  Sum_probs=181.2

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCC-----------------------
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKT-----------------------   64 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-----------------------   64 (262)
                      +....+++.+|++++++++||||+++++++.+++..++||||+++++|.+++...+.                       
T Consensus        66 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (314)
T 2ivs_A           66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER  145 (314)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------C
T ss_pred             CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCccccccccccccccccccc
Confidence            466778899999999999999999999999999999999999999999999987543                       


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccc
Q 024828           65 -IPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERI  141 (262)
Q Consensus        65 -~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~  141 (262)
                       ++...+..++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||++........  ......++..|+|||.+
T Consensus       146 ~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  224 (314)
T 2ivs_A          146 ALTMGDLISFAWQISQGMQYLAE-MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL  224 (314)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHH-CCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhh
Confidence             8999999999999999999999 9999999999999999999999999999876543322  12233567789999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCC
Q 024828          142 SGGKYGYKSDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQR  220 (262)
Q Consensus       142 ~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  220 (262)
                      .+..++.++|+||||+++|+|++ |..||.......       ....+..+.... .+..+++++.+++.+||+.||.+|
T Consensus       225 ~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~R  296 (314)
T 2ivs_A          225 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER-------LFNLLKTGHRME-RPDNCSEEMYRLMLQCWKQEPDKR  296 (314)
T ss_dssp             HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-------HHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHhhcCCcCC-CCccCCHHHHHHHHHHccCChhhC
Confidence            88889999999999999999999 999998765432       223333333333 335789999999999999999999


Q ss_pred             CCHHHHhcC
Q 024828          221 LSAQELMTH  229 (262)
Q Consensus       221 pt~~~~l~h  229 (262)
                      ||+++++++
T Consensus       297 ps~~~l~~~  305 (314)
T 2ivs_A          297 PVFADISKD  305 (314)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999874


No 148
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=4.7e-42  Score=290.08  Aligned_cols=227  Identities=27%  Similarity=0.438  Sum_probs=178.1

Q ss_pred             cccchhHHHHHHHHHHHHHHhcCC--------CCeeEeeceEEE----ECCeEEEEEeecCCCCHHHHHHhc--CCCCHH
Q 024828            3 IQMNVEESARRQIAQELKINQSSQ--------CPYVVVCYQSFY----SNGAISIILEYMDGGSLADFLKKV--KTIPEE   68 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~--------h~~i~~~~~~~~----~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~   68 (262)
                      |.+.......+.+.+|++++++++        |+||+++++.+.    ++...|+|||++ +++|.+++...  +.++..
T Consensus        68 K~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~  146 (397)
T 1wak_A           68 KVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLP  146 (397)
T ss_dssp             EEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHH
T ss_pred             EEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHH
Confidence            444455667788999999999884        788999999987    456799999999 55777777554  469999


Q ss_pred             HHHHHHHHHHHHHHHHhhcC-CeeeCCCCCCCEEEccCC-----------------------------------------
Q 024828           69 YLAAICEQVLKGLLYLHHEK-HIIHRDLKPSNLLINHRG-----------------------------------------  106 (262)
Q Consensus        69 ~~~~i~~~l~~~l~~lh~~~-~i~H~dl~p~nil~~~~~-----------------------------------------  106 (262)
                      .+..++.||+.||+|||+ . |++|+||||+||+++.++                                         
T Consensus       147 ~~~~i~~qi~~aL~~lH~-~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (397)
T 1wak_A          147 CVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPL  225 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHH-TTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTT
T ss_pred             HHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccc
Confidence            999999999999999998 7 999999999999998765                                         


Q ss_pred             --------cEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCch
Q 024828          107 --------EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGW  178 (262)
Q Consensus       107 --------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~  178 (262)
                              .++|+|||.+......   .....++..|+|||++.+..++.++|||||||++|+|++|+.||......+..
T Consensus       226 ~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~  302 (397)
T 1wak_A          226 EPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYT  302 (397)
T ss_dssp             SGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSC
T ss_pred             ccccccccceEecccccccccccc---CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccC
Confidence                    7999999998765432   33457899999999999888999999999999999999999999876544322


Q ss_pred             hhHH--HHHHHHhcCCCC-------------------------------------CCCCCCCCHHHHHHHHHhhcCCcCC
Q 024828          179 TSFY--ELMEAIVDQPPP-------------------------------------SAPSDQFSPEFCSFISACVQKEPQQ  219 (262)
Q Consensus       179 ~~~~--~~~~~~~~~~~~-------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~  219 (262)
                      ....  ..+.........                                     .......++++.+||.+||+.||++
T Consensus       303 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  382 (397)
T 1wak_A          303 RDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEK  382 (397)
T ss_dssp             HHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGG
T ss_pred             chHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhh
Confidence            2111  111111111000                                     0001123456889999999999999


Q ss_pred             CCCHHHHhcCccccc
Q 024828          220 RLSAQELMTHPFLKM  234 (262)
Q Consensus       220 Rpt~~~~l~h~~~~~  234 (262)
                      |||++|+|+||||+.
T Consensus       383 Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          383 RATAAECLRHPWLNS  397 (397)
T ss_dssp             SCCHHHHHTSGGGGC
T ss_pred             cCCHHHHhhCccccC
Confidence            999999999999973


No 149
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=1.6e-41  Score=282.70  Aligned_cols=229  Identities=24%  Similarity=0.422  Sum_probs=180.4

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEEC-----CeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSN-----GAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~   82 (262)
                      ......++.+|++++++++||||+++++++...     ...++|||++.+ +|.+++.. +.++...+..++.|++.||+
T Consensus        49 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~~~~qi~~~L~  126 (353)
T 2b9h_A           49 KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVIST-QMLSDDHIQYFIYQTLRAVK  126 (353)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccCc-cHHHHHhh-cCCCHHHHHHHHHHHHHHHH
Confidence            456677889999999999999999999987654     679999999975 99999887 67999999999999999999


Q ss_pred             HHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC----------CcccccccccccCcccccC-CCCCcchh
Q 024828           83 YLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG----------QANTFVGTYNYMSPERISG-GKYGYKSD  151 (262)
Q Consensus        83 ~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~-~~~~~~~D  151 (262)
                      |||+ .|++|+||+|+||+++.++.++|+|||++........          ......|+..|+|||.+.+ ..++.++|
T Consensus       127 ~LH~-~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D  205 (353)
T 2b9h_A          127 VLHG-SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMD  205 (353)
T ss_dssp             HHHH-TTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHH
T ss_pred             HHHH-CCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhh
Confidence            9999 9999999999999999999999999999876543211          1223467899999998764 56899999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHH-----------------HHHhcCCCCCC------CCCCCCHHHHHH
Q 024828          152 IWSLGLVLLECATGQFPYSPPEQQDGWTSFYELM-----------------EAIVDQPPPSA------PSDQFSPEFCSF  208 (262)
Q Consensus       152 i~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~------~~~~~~~~l~~l  208 (262)
                      +||||+++++|++|+.||.+.+..+....+....                 ...........      ....+++++.+|
T Consensus       206 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (353)
T 2b9h_A          206 VWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDL  285 (353)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHH
Confidence            9999999999999999998765322111110000                 00000000000      013678999999


Q ss_pred             HHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          209 ISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       209 i~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      +.+||+.||.+|||++++++||||+......
T Consensus       286 i~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~  316 (353)
T 2b9h_A          286 LQRMLVFDPAKRITAKEALEHPYLQTYHDPN  316 (353)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred             HHHhcCcCcccCCCHHHHhcCccccccCCcc
Confidence            9999999999999999999999999876543


No 150
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=8.8e-42  Score=280.66  Aligned_cols=216  Identities=22%  Similarity=0.401  Sum_probs=175.6

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECC--eEEEEEeecCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHH
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNG--AISIILEYMDGGSLADFLKKVKT---IPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~~l~~l   84 (262)
                      ...+.+.+|++++++++||||+++++++.+..  ..++||||+++++|.+++.....   ++...+..++.|++.||+||
T Consensus        49 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~L  128 (319)
T 4euu_A           49 RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL  128 (319)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence            34567789999999999999999999998755  78999999999999999987543   99999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEE----ccCCcEEEEecccccccccCCCCcccccccccccCccccc--------CCCCCcchhH
Q 024828           85 HHEKHIIHRDLKPSNLLI----NHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERIS--------GGKYGYKSDI  152 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~----~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~--------~~~~~~~~Di  152 (262)
                      |+ .|++|+||||+||++    +.++.++|+|||++....... ......++..|+|||++.        +..++.++||
T Consensus       129 H~-~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Di  206 (319)
T 4euu_A          129 RE-NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDL  206 (319)
T ss_dssp             HH-TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHH
T ss_pred             HH-CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHH
Confidence            99 999999999999999    677789999999997654433 333456899999999886        4678999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCC-----------------------CCCCCCCHHHHHHH
Q 024828          153 WSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPS-----------------------APSDQFSPEFCSFI  209 (262)
Q Consensus       153 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li  209 (262)
                      |||||++|+|++|+.||..........   +.+..+..+.+..                       .....+++.+.+++
T Consensus       207 wslG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  283 (319)
T 4euu_A          207 WSIGVTFYHAATGSLPFRPFEGPRRNK---EVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVL  283 (319)
T ss_dssp             HHHHHHHHHHHHSSCSEECTTCGGGCH---HHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCccchhH---HHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHH
Confidence            999999999999999997655443222   2222322222111                       11123456789999


Q ss_pred             HHhhcCCcCCCCCHHHHhcCc
Q 024828          210 SACVQKEPQQRLSAQELMTHP  230 (262)
Q Consensus       210 ~~~l~~~p~~Rpt~~~~l~h~  230 (262)
                      ++||+.||++|||++|+++||
T Consensus       284 ~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          284 ANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHSCCCTTTSCCHHHHHHHH
T ss_pred             HHhccCChhhhccHHHhhhcc
Confidence            999999999999999999997


No 151
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=2.1e-41  Score=279.54  Aligned_cols=222  Identities=23%  Similarity=0.402  Sum_probs=177.3

Q ss_pred             HHHHHHHHHHHHhcCC-CCeeEeeceEEEE--CCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828           11 ARRQIAQELKINQSSQ-CPYVVVCYQSFYS--NGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ..+.+.+|++++++++ ||||+++++++.+  ....++||||+.+++|.++++.   ++...+..++.|++.||+|||+ 
T Consensus        73 ~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-  148 (330)
T 3nsz_A           73 KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHS-  148 (330)
T ss_dssp             CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHh-
Confidence            3567899999999996 9999999999988  6779999999999999998864   8999999999999999999998 


Q ss_pred             CCeeeCCCCCCCEEEccCC-cEEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHHHHHHHHhC
Q 024828           88 KHIIHRDLKPSNLLINHRG-EVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGLVLLECATG  165 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g  165 (262)
                      .|++|+||+|+||+++.++ .++|+|||++....... ......++..|+|||.+.+ ..++.++|||||||++++|++|
T Consensus       149 ~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g  227 (330)
T 3nsz_A          149 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR  227 (330)
T ss_dssp             TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHT
T ss_pred             CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhC
Confidence            9999999999999999777 89999999997654332 3344578889999999987 5689999999999999999999


Q ss_pred             CCCCCCCCccCc-hhhHHH------HHHHHhcCC----------------------CCCCCCCCCCHHHHHHHHHhhcCC
Q 024828          166 QFPYSPPEQQDG-WTSFYE------LMEAIVDQP----------------------PPSAPSDQFSPEFCSFISACVQKE  216 (262)
Q Consensus       166 ~~p~~~~~~~~~-~~~~~~------~~~~~~~~~----------------------~~~~~~~~~~~~l~~li~~~l~~~  216 (262)
                      +.||........ ......      ....+....                      ........+++++.+||.+||+.|
T Consensus       228 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  307 (330)
T 3nsz_A          228 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD  307 (330)
T ss_dssp             CSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSS
T ss_pred             CCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCC
Confidence            999965433210 000000      000011000                      001111237899999999999999


Q ss_pred             cCCCCCHHHHhcCccccccCC
Q 024828          217 PQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       217 p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      |.+|||++|+|+||||+....
T Consensus       308 P~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          308 HQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             GGGSCCHHHHHTSGGGTTCC-
T ss_pred             cccCCCHHHHhcCccHhhhcc
Confidence            999999999999999997653


No 152
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=9.2e-42  Score=285.64  Aligned_cols=217  Identities=24%  Similarity=0.391  Sum_probs=184.6

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-------TIPEEYLAAICEQVLKG   80 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-------~~~~~~~~~i~~~l~~~   80 (262)
                      ......++.+|+.++++++||||+++++++.+....++||||+.|++|.+++...+       .++...+..++.|++.|
T Consensus       114 ~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a  193 (367)
T 3l9p_A          114 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG  193 (367)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHH
T ss_pred             ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHH
Confidence            46667789999999999999999999999999999999999999999999998753       48999999999999999


Q ss_pred             HHHHhhcCCeeeCCCCCCCEEEccCC---cEEEEecccccccccCC--CCcccccccccccCcccccCCCCCcchhHHHH
Q 024828           81 LLYLHHEKHIIHRDLKPSNLLINHRG---EVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGKYGYKSDIWSL  155 (262)
Q Consensus        81 l~~lh~~~~i~H~dl~p~nil~~~~~---~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~sl  155 (262)
                      |+|||+ .|++|+||||+||+++.++   .++|+|||++.......  .......+++.|+|||++.+..++.++|||||
T Consensus       194 L~~LH~-~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvwsl  272 (367)
T 3l9p_A          194 CQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF  272 (367)
T ss_dssp             HHHHHH-TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHHh-CCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHH
Confidence            999999 9999999999999998555   49999999987543222  22334567889999999988889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccc
Q 024828          156 GLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLK  233 (262)
Q Consensus       156 G~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~  233 (262)
                      ||++|+|++ |..||.....       .+....+..+..... +..+++++.+|+.+||+.||.+|||+++++++.++-
T Consensus       273 G~il~ellt~g~~pf~~~~~-------~~~~~~i~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          273 GVLLWEIFSLGYMPYPSKSN-------QEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HHHHHHHHTTSCCSSTTCCH-------HHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCCCCC-CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            999999998 9999987543       234444554444333 357899999999999999999999999999998764


No 153
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.1e-41  Score=283.96  Aligned_cols=213  Identities=24%  Similarity=0.423  Sum_probs=183.6

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC----------------CCCHHHH
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK----------------TIPEEYL   70 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------~~~~~~~   70 (262)
                      .+...+++.+|+++++++ +||||+++++++.+++..++||||+.+++|.+++....                .+++..+
T Consensus       114 ~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  193 (382)
T 3tt0_A          114 TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL  193 (382)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHH
Confidence            466678899999999999 99999999999999999999999999999999998754                4899999


Q ss_pred             HHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC--CCcccccccccccCcccccCCCCCc
Q 024828           71 AAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGKYGY  148 (262)
Q Consensus        71 ~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~  148 (262)
                      ..++.|++.||+|||+ .|++|+||||+||+++.++.++|+|||++.......  .......++..|+|||++.+..++.
T Consensus       194 ~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  272 (382)
T 3tt0_A          194 VSCAYQVARGMEYLAS-KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH  272 (382)
T ss_dssp             HHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCH
T ss_pred             HHHHHHHHHHHHHHHh-CCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCc
Confidence            9999999999999999 999999999999999999999999999997654332  2223345678899999999888999


Q ss_pred             chhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHh
Q 024828          149 KSDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELM  227 (262)
Q Consensus       149 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l  227 (262)
                      ++||||||+++++|++ |..||.....       .+....+..+..... +..+++++.+|+.+||+.||.+|||+++++
T Consensus       273 ~~DiwslG~il~ellt~g~~p~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell  344 (382)
T 3tt0_A          273 QSDVWSFGVLLWEIFTLGGSPYPGVPV-------EELFKLLKEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLV  344 (382)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHHHTTCCCCC-CSSCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCCCCC-CccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            9999999999999999 9999986543       234444444444433 357899999999999999999999999999


Q ss_pred             cC
Q 024828          228 TH  229 (262)
Q Consensus       228 ~h  229 (262)
                      ++
T Consensus       345 ~~  346 (382)
T 3tt0_A          345 ED  346 (382)
T ss_dssp             HH
T ss_pred             HH
Confidence            85


No 154
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=2e-41  Score=281.04  Aligned_cols=212  Identities=25%  Similarity=0.391  Sum_probs=180.8

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc------------------------C
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV------------------------K   63 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~------------------------~   63 (262)
                      .....+.+.+|++++++++||||+++++++.+++..++||||+++++|.+++...                        .
T Consensus        90 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (343)
T 1luf_A           90 SADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP  169 (343)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------C
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCC
Confidence            4566788999999999999999999999999999999999999999999999864                        5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC--CCcccccccccccCcccc
Q 024828           64 TIPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERI  141 (262)
Q Consensus        64 ~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~  141 (262)
                      .++...++.++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||++.......  .......++..|+|||.+
T Consensus       170 ~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  248 (343)
T 1luf_A          170 PLSCAEQLCIARQVAAGMAYLSE-RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI  248 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhh
Confidence            68999999999999999999999 999999999999999999999999999987653322  222334678889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCC
Q 024828          142 SGGKYGYKSDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQR  220 (262)
Q Consensus       142 ~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  220 (262)
                      .+..++.++|+||||+++|+|++ |..||.....       .+....+..+..... +..+++++.+++.+||+.||.+|
T Consensus       249 ~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~R  320 (343)
T 1luf_A          249 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH-------EEVIYYVRDGNILAC-PENCPLELYNLMRLCWSKLPADR  320 (343)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh-------HHHHHHHhCCCcCCC-CCCCCHHHHHHHHHHcccCcccC
Confidence            88889999999999999999999 9999986543       233444444444333 35789999999999999999999


Q ss_pred             CCHHHHhc
Q 024828          221 LSAQELMT  228 (262)
Q Consensus       221 pt~~~~l~  228 (262)
                      ||+.++++
T Consensus       321 ps~~~~~~  328 (343)
T 1luf_A          321 PSFCSIHR  328 (343)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            99999975


No 155
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=2.6e-41  Score=277.08  Aligned_cols=225  Identities=28%  Similarity=0.453  Sum_probs=179.2

Q ss_pred             hhHHHHHHHHHHHHHHhcCC--CCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQ--CPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      .+....+.+.+|++++++++  ||||+++++++.++...++|||+. +++|.+++.+.+.++...+..++.|++.||.||
T Consensus        65 ~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~L  143 (313)
T 3cek_A           65 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI  143 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEecC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            35667788999999999996  599999999999999999999955 679999999988999999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccC-----------CCCCcchh
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISG-----------GKYGYKSD  151 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~-----------~~~~~~~D  151 (262)
                      |+ .|++|+||+|+||+++ ++.++|+|||++........  ......++..|+|||.+.+           ..++.++|
T Consensus       144 H~-~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D  221 (313)
T 3cek_A          144 HQ-HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD  221 (313)
T ss_dssp             HH-TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHH
T ss_pred             HH-CCceecCCCcccEEEE-CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHH
Confidence            99 9999999999999995 58999999999876543322  1233468999999999875           36788999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcc
Q 024828          152 IWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPF  231 (262)
Q Consensus       152 i~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~  231 (262)
                      |||||+++|+|++|+.||......      ................+...++++.+++.+||+.||.+|||++++++|||
T Consensus       222 i~slG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~  295 (313)
T 3cek_A          222 VWSLGCILYYMTYGKTPFQQIINQ------ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY  295 (313)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             HHHHHHHHHHHHhCCCchhhHHHH------HHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence            999999999999999999764321      12233333333333334567899999999999999999999999999999


Q ss_pred             ccccCCccc
Q 024828          232 LKMYGDLNV  240 (262)
Q Consensus       232 ~~~~~~~~~  240 (262)
                      |+.......
T Consensus       296 ~~~~~~~~~  304 (313)
T 3cek_A          296 VQIQTHPVN  304 (313)
T ss_dssp             HHCC-----
T ss_pred             ccCCCCchh
Confidence            987654433


No 156
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=9.8e-42  Score=275.69  Aligned_cols=211  Identities=25%  Similarity=0.430  Sum_probs=179.3

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ...+++.+|++++++++||||+++++++.++...++||||+.+++|.+++.. ...++...+..++.|++.||.+||+ .
T Consensus        61 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~  139 (283)
T 3gen_A           61 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES-K  139 (283)
T ss_dssp             BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence            3456789999999999999999999999999999999999999999999987 4679999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCC-CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh-CC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT-GQ  166 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~-g~  166 (262)
                      |++|+||+|+||+++.++.++|+|||.+....... .......++..|+|||.+.+..++.++|+||||+++|+|++ |+
T Consensus       140 ~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~  219 (283)
T 3gen_A          140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK  219 (283)
T ss_dssp             TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTC
T ss_pred             CccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999987553221 11222345678999999998889999999999999999998 99


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      .||......       .....+........ +...++.+.+++.+||+.||.+|||++++++|
T Consensus       220 ~p~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          220 MPYERFTNS-------ETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             CTTTTSCHH-------HHHHHHHTTCCCCC-CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCccccChh-------HHHHHHhcccCCCC-CCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            999875432       33344444433333 35678999999999999999999999999875


No 157
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1.7e-41  Score=282.45  Aligned_cols=229  Identities=23%  Similarity=0.386  Sum_probs=182.0

Q ss_pred             cchhHHHHHHHHHHHHHHhcCCCCe------eEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHHH
Q 024828            5 MNVEESARRQIAQELKINQSSQCPY------VVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICEQ   76 (262)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~~   76 (262)
                      ........+.+.+|++++++++|++      ++.+.+++...+..++|||++ +++|.+++....  .++...+..++.|
T Consensus        53 ~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~q  131 (355)
T 2eu9_A           53 IRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQ  131 (355)
T ss_dssp             ECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred             EcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHH
Confidence            3345566778889999999886555      899999999999999999999 558888776653  6999999999999


Q ss_pred             HHHHHHHHhhcCCeeeCCCCCCCEEE-------------------ccCCcEEEEecccccccccCCCCcccccccccccC
Q 024828           77 VLKGLLYLHHEKHIIHRDLKPSNLLI-------------------NHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMS  137 (262)
Q Consensus        77 l~~~l~~lh~~~~i~H~dl~p~nil~-------------------~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~  137 (262)
                      ++.||+|||+ .|++|+||||+||++                   +.++.++|+|||++.....   ......++..|+|
T Consensus       132 i~~~L~~lH~-~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~a  207 (355)
T 2eu9_A          132 LCHALRFLHE-NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE---HHTTIVATRHYRP  207 (355)
T ss_dssp             HHHHHHHHHT-TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS---CCCSSCSCGGGCC
T ss_pred             HHHHHHHHHH-CCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc---cccCCcCCCcccC
Confidence            9999999998 999999999999999                   5678899999999876432   2334578999999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCC-----------------------
Q 024828          138 PERISGGKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPP-----------------------  194 (262)
Q Consensus       138 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------  194 (262)
                      ||++.+..++.++|+||||+++|+|++|+.||......+..    ..+.......+.                       
T Consensus       208 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  283 (355)
T 2eu9_A          208 PEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL----VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENS  283 (355)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTS
T ss_pred             CeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHHHcCCCcHHHhhhccchhhhccccccccccc
Confidence            99999888999999999999999999999999876543221    111221111000                       


Q ss_pred             ----------------CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcccch
Q 024828          195 ----------------SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLNVDL  242 (262)
Q Consensus       195 ----------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~~~~  242 (262)
                                      .......+.++.+|+.+||+.||.+|||++|+++||||+.......++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~~  347 (355)
T 2eu9_A          284 SDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSF  347 (355)
T ss_dssp             HHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHHHHC-
T ss_pred             chhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChhhccc
Confidence                            001112245789999999999999999999999999999887655443


No 158
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=6.1e-41  Score=275.27  Aligned_cols=232  Identities=36%  Similarity=0.719  Sum_probs=179.8

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .+...+.+.++..+++.++||||+++++++.+++..++||||+ ++.+..+... .+.++...+..++.|++.||.|||+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  142 (318)
T 2dyl_A           64 KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE  142 (318)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            3444455556666788889999999999999999999999999 5577776654 4679999999999999999999998


Q ss_pred             cC-CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCccccc-----CCCCCcchhHHHHHHHHH
Q 024828           87 EK-HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERIS-----GGKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        87 ~~-~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~-----~~~~~~~~Di~slG~~l~  160 (262)
                       . |++|+||+|+||+++.++.++|+|||++....... ......++..|+|||.+.     +..++.++||||||+++|
T Consensus       143 -~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~  220 (318)
T 2dyl_A          143 -KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLV  220 (318)
T ss_dssp             -HHCCCCCCCCGGGEEECTTSCEEECCCTTC---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHH
T ss_pred             -hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHH
Confidence             6 99999999999999999999999999987654322 223446889999999984     456889999999999999


Q ss_pred             HHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCC-CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          161 ECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSA-PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       161 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      +|++|+.||......      ............+.. ....+++++.+++.+||+.||.+|||++++++||||+......
T Consensus       221 ~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~  294 (318)
T 2dyl_A          221 ELATGQFPYKNCKTD------FEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLE  294 (318)
T ss_dssp             HHHHSSCTTTTCCSH------HHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHHHSC
T ss_pred             HHHhCCCCCCCCCcc------HHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhccccc
Confidence            999999999864322      123333333333222 2246899999999999999999999999999999999988777


Q ss_pred             cchhhHhhh
Q 024828          240 VDLSEYFTD  248 (262)
Q Consensus       240 ~~~~~~~~~  248 (262)
                      ....+.+.+
T Consensus       295 ~~~~~~~~~  303 (318)
T 2dyl_A          295 VDVASWFKD  303 (318)
T ss_dssp             CCHHHHHHH
T ss_pred             chhHHHhhc
Confidence            777766655


No 159
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.4e-40  Score=272.42  Aligned_cols=215  Identities=33%  Similarity=0.601  Sum_probs=174.6

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK----VKTIPEEYLAAICEQVLKGLLY   83 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~   83 (262)
                      +....+++.+|++++++++||||+++++++.+++..++||||+++++|.+++..    ...++...+..++.|++.||.+
T Consensus        72 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~  151 (310)
T 2wqm_A           72 DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH  151 (310)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHH
Confidence            467788899999999999999999999999999999999999999999999964    3568999999999999999999


Q ss_pred             HhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 024828           84 LHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        84 lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  163 (262)
                      ||+ .|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+..++.++|+||||+++++|+
T Consensus       152 LH~-~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~  230 (310)
T 2wqm_A          152 MHS-RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA  230 (310)
T ss_dssp             HHH-TTCCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             Hhh-CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHH
Confidence            999 9999999999999999999999999999876654444444557889999999999888999999999999999999


Q ss_pred             hCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          164 TGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       164 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +|..||.....     ........+.....+......+++++.+++.+||+.||.+|||++++++
T Consensus       231 ~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          231 ALQSPFYGDKM-----NLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             HSSCTTC---C-----CHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCcccch-----hHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            99999976432     2234445555555555555678999999999999999999999999986


No 160
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=3e-41  Score=283.00  Aligned_cols=224  Identities=27%  Similarity=0.461  Sum_probs=177.3

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeE------EEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAI------SIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~------~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l   81 (262)
                      ++...+++.+|+.+++.++||||+++++++...+..      ++||||+.+ +|.+++..  .++...+..++.|++.||
T Consensus        81 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~aL  157 (371)
T 4exu_A           81 SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGM--EFSEEKIQYLVYQMLKGL  157 (371)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHHTTS--CCCHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEccccc-cHHHHhhc--CCCHHHHHHHHHHHHHHH
Confidence            566678899999999999999999999999876654      999999975 99888753  599999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHHHHH
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~  160 (262)
                      +|||+ .|++|+||+|+||+++.++.++|+|||++......   .....+++.|+|||.+.+ ..++.++||||||++++
T Consensus       158 ~~LH~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  233 (371)
T 4exu_A          158 KYIHS-AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA  233 (371)
T ss_dssp             HHHHH-TTCCCSCCCGGGEEECTTCCEEECSTTCC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHH
T ss_pred             HHHHH-CCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHH
Confidence            99999 99999999999999999999999999998765432   234567999999999987 57899999999999999


Q ss_pred             HHHhCCCCCCCCCccCchhhHHHH--------------------HHHHhcCCCCC--CCCCCCCHHHHHHHHHhhcCCcC
Q 024828          161 ECATGQFPYSPPEQQDGWTSFYEL--------------------MEAIVDQPPPS--APSDQFSPEFCSFISACVQKEPQ  218 (262)
Q Consensus       161 ~l~~g~~p~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~  218 (262)
                      +|++|+.||.+.+..+........                    ...........  .....+++++.+||.+||+.||.
T Consensus       234 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  313 (371)
T 4exu_A          234 EMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVD  313 (371)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTT
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChh
Confidence            999999999876543222111110                    00000000000  00135689999999999999999


Q ss_pred             CCCCHHHHhcCccccccCCc
Q 024828          219 QRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       219 ~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      +|||++|+++||||+.....
T Consensus       314 ~Rpt~~ell~hp~f~~~~~~  333 (371)
T 4exu_A          314 KRLTAAQALTHPFFEPFRDP  333 (371)
T ss_dssp             TSCCHHHHHTSGGGTTTCCG
T ss_pred             hcCCHHHHhcCcccccCCCc
Confidence            99999999999999877643


No 161
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=1.3e-41  Score=284.00  Aligned_cols=233  Identities=22%  Similarity=0.387  Sum_probs=179.4

Q ss_pred             cchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCe-------EEEEEeecCCCCHHHHHH----hcCCCCHHHHHHH
Q 024828            5 MNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGA-------ISIILEYMDGGSLADFLK----KVKTIPEEYLAAI   73 (262)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~lv~e~~~~~sL~~~l~----~~~~~~~~~~~~i   73 (262)
                      +..+.....+..++++.+..++||||+++++++...+.       .++||||+.+ +|...+.    ....++...+..+
T Consensus        56 ~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~  134 (360)
T 3e3p_A           56 VIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVF  134 (360)
T ss_dssp             EECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHH
T ss_pred             EecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHH
Confidence            33344445567788888899999999999999876333       8899999987 6655443    4567899999999


Q ss_pred             HHHHHHHHHHHh--hcCCeeeCCCCCCCEEEcc-CCcEEEEecccccccccCCCCcccccccccccCcccccCCC-CCcc
Q 024828           74 CEQVLKGLLYLH--HEKHIIHRDLKPSNLLINH-RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGK-YGYK  149 (262)
Q Consensus        74 ~~~l~~~l~~lh--~~~~i~H~dl~p~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~  149 (262)
                      +.|++.||.|||  + .|++|+||||+||+++. ++.++|+|||++....... ......++..|+|||.+.+.. ++.+
T Consensus       135 ~~qi~~al~~lH~~~-~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~  212 (360)
T 3e3p_A          135 LFQLIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTA  212 (360)
T ss_dssp             HHHHHHHHHHHTSTT-TCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHHHhCCC-CCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcH
Confidence            999999999999  8 99999999999999986 8899999999997654332 333456899999999987655 8999


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHH--------HHHhcCCC---------------CCCCCCCCCHHHH
Q 024828          150 SDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELM--------EAIVDQPP---------------PSAPSDQFSPEFC  206 (262)
Q Consensus       150 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~---------------~~~~~~~~~~~l~  206 (262)
                      +||||||+++|+|++|+.||................        ..+.....               ........++++.
T Consensus       213 ~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (360)
T 3e3p_A          213 VDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAY  292 (360)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHH
Confidence            999999999999999999998765443222221110        00000000               0011123568899


Q ss_pred             HHHHHhhcCCcCCCCCHHHHhcCccccccCCccc
Q 024828          207 SFISACVQKEPQQRLSAQELMTHPFLKMYGDLNV  240 (262)
Q Consensus       207 ~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~~  240 (262)
                      +|+.+||+.||.+|||+.|+++||||+...+...
T Consensus       293 ~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  326 (360)
T 3e3p_A          293 DLLSALLQYLPEERMKPYEALCHPYFDELHDPAT  326 (360)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTTC
T ss_pred             HHHHHHhccCccccCCHHHHhcCccccccCCccc
Confidence            9999999999999999999999999998876544


No 162
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=2e-41  Score=283.18  Aligned_cols=227  Identities=19%  Similarity=0.358  Sum_probs=174.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE-----CCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYS-----NGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l   81 (262)
                      +....+++.+|++++++++||||+++++++..     ....|+||||+.| +|.+++... ..++...+..++.|++.||
T Consensus        69 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l  147 (362)
T 3pg1_A           69 DSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGL  147 (362)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            45567899999999999999999999999854     3368999999975 888888765 4699999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHHHHH
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~  160 (262)
                      .|||+ .|++|+||+|+||+++.++.++|+|||++....... ......++..|+|||.+.+ ..++.++|+||||+++|
T Consensus       148 ~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  225 (362)
T 3pg1_A          148 HVLHE-AGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA  225 (362)
T ss_dssp             HHHHH-TTCCCCCCCGGGEEECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHH
T ss_pred             HHHHH-CcCEecCCChHHEEEcCCCCEEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHH
Confidence            99999 999999999999999999999999999987543322 2334568889999999887 56899999999999999


Q ss_pred             HHHhCCCCCCCCCccCchhhHHHHH----------------HHHhcCCCCCCC-------CCCCCHHHHHHHHHhhcCCc
Q 024828          161 ECATGQFPYSPPEQQDGWTSFYELM----------------EAIVDQPPPSAP-------SDQFSPEFCSFISACVQKEP  217 (262)
Q Consensus       161 ~l~~g~~p~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p  217 (262)
                      +|++|+.||......+.........                ...........+       ....++.+.+|+.+||+.||
T Consensus       226 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  305 (362)
T 3pg1_A          226 EMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNP  305 (362)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCCh
Confidence            9999999998765432221111100                000011111111       13567889999999999999


Q ss_pred             CCCCCHHHHhcCccccccCC
Q 024828          218 QQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       218 ~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      .+|||++++++||||+....
T Consensus       306 ~~Rpt~~ell~hp~f~~~~~  325 (362)
T 3pg1_A          306 QRRISTEQALRHPYFESLFD  325 (362)
T ss_dssp             GGSCCHHHHHTSGGGTTTCC
T ss_pred             hhCCCHHHHHcCchhhhccC
Confidence            99999999999999998754


No 163
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.5e-40  Score=282.84  Aligned_cols=223  Identities=26%  Similarity=0.409  Sum_probs=174.1

Q ss_pred             HHHHHHHHhcCCCCeeEeeceEEEEC------CeEEEEEeecCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHH
Q 024828           15 IAQELKINQSSQCPYVVVCYQSFYSN------GAISIILEYMDGGSLADFLK----KVKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus        15 ~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~----~~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      ..+|++++++++||||+++++++...      ..+++||||+.+ +|.+.+.    ....++...+..++.|++.||+||
T Consensus        94 ~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L  172 (420)
T 1j1b_A           94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI  172 (420)
T ss_dssp             CCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            45799999999999999999988542      247799999976 7776664    346799999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccC-CcEEEEecccccccccCCCCcccccccccccCcccccCC-CCCcchhHHHHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHR-GEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGG-KYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l  162 (262)
                      |+ .|++|+||||+||+++.+ +.++|+|||++....... ......++..|+|||++.+. .++.++|||||||++|+|
T Consensus       173 H~-~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el  250 (420)
T 1j1b_A          173 HS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL  250 (420)
T ss_dssp             HT-TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             HH-CCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHH
Confidence            98 999999999999999865 568999999997654322 23345789999999999765 689999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHH--------HHHHhcCC----CCCC--------CCCCCCHHHHHHHHHhhcCCcCCCCC
Q 024828          163 ATGQFPYSPPEQQDGWTSFYEL--------MEAIVDQP----PPSA--------PSDQFSPEFCSFISACVQKEPQQRLS  222 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rpt  222 (262)
                      ++|+.||.+....+....+...        +.......    .+..        .....++++.+||.+||..||.+|||
T Consensus       251 l~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t  330 (420)
T 1j1b_A          251 LLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT  330 (420)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCC
Confidence            9999999876543322222111        01110000    0000        12356889999999999999999999


Q ss_pred             HHHHhcCccccccCCccc
Q 024828          223 AQELMTHPFLKMYGDLNV  240 (262)
Q Consensus       223 ~~~~l~h~~~~~~~~~~~  240 (262)
                      +.|+++||||+...+...
T Consensus       331 ~~e~l~hp~f~~~~~~~~  348 (420)
T 1j1b_A          331 PLEACAHSFFDELRDPNV  348 (420)
T ss_dssp             HHHHHTSGGGGGGGCTTC
T ss_pred             HHHHhCCHhhcccccccc
Confidence            999999999988765443


No 164
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=3.8e-41  Score=289.01  Aligned_cols=213  Identities=23%  Similarity=0.399  Sum_probs=178.3

Q ss_pred             ccchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECC-eEEEEEeecCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHH
Q 024828            4 QMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNG-AISIILEYMDGGSLADFLKKVKT--IPEEYLAAICEQVLKG   80 (262)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~i~~~l~~~   80 (262)
                      |....+...+++.+|++++++++||||+++++++.+.. ..++||||+++++|.+++.+.+.  ++...+..++.|++.|
T Consensus       222 K~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~  301 (450)
T 1k9a_A          222 KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA  301 (450)
T ss_dssp             EEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHH
T ss_pred             EEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence            33333346678999999999999999999999987654 79999999999999999987654  7999999999999999


Q ss_pred             HHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHH
Q 024828           81 LLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        81 l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~  160 (262)
                      |+|||+ .|++|+||+|+||+++.++.++|+|||++......   .....++..|+|||.+.+..++.++||||||+++|
T Consensus       302 l~~LH~-~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~  377 (450)
T 1k9a_A          302 MEYLEG-NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW  377 (450)
T ss_dssp             HHHHHH-TTEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHh-CCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHH
Confidence            999999 99999999999999999999999999998754322   12235678899999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          161 ECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       161 ~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +|++ |+.||......+       ....+..+..... +..+++++.+||.+||+.||.+|||+.++++
T Consensus       378 el~t~g~~P~~~~~~~~-------~~~~i~~~~~~~~-p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          378 EIYSFGRVPYPRIPLKD-------VVPRVEKGYKMDA-PDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHTTTCCSSTTSCTTT-------HHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHH-------HHHHHHcCCCCCC-CCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9998 999998765432       2334444444433 3578999999999999999999999999975


No 165
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=3.5e-41  Score=274.08  Aligned_cols=219  Identities=29%  Similarity=0.445  Sum_probs=176.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE--CCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYS--NGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      +....+++.+|++++++++||||+++++++..  ....++||||+++++|.+++...+ .++...+..++.|++.||+||
T Consensus        51 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l  130 (295)
T 3ugc_A           51 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL  130 (295)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHH
Confidence            55667789999999999999999999999854  356899999999999999998754 499999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC---CcccccccccccCcccccCCCCCcchhHHHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG---QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  161 (262)
                      |+ .|++|+||+|+||+++.++.++|+|||++........   ......++..|+|||.+.+..++.++||||||+++|+
T Consensus       131 H~-~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  209 (295)
T 3ugc_A          131 GT-KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE  209 (295)
T ss_dssp             HH-TTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             hc-CCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHH
Confidence            98 9999999999999999999999999999976543321   1223346677999999998889999999999999999


Q ss_pred             HHhCCCCCCCCCcc---------CchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          162 CATGQFPYSPPEQQ---------DGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       162 l~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |++|..|+......         ............+........ +..+++++.+++.+||+.||++|||++++++
T Consensus       210 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          210 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR-PDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCC-CcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            99999988653211         111112233344444444333 4578999999999999999999999999975


No 166
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.6e-41  Score=280.59  Aligned_cols=215  Identities=27%  Similarity=0.399  Sum_probs=178.4

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-----------------------
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-----------------------   63 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----------------------   63 (262)
                      .....+.+.+|+++++++ +||||+++++++.+.+..++||||+++++|.+++....                       
T Consensus        88 ~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (344)
T 1rjb_A           88 DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN  167 (344)
T ss_dssp             ----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC--------------------
T ss_pred             CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccc
Confidence            445667899999999999 89999999999999999999999999999999998653                       


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC--cccccccccccCcccc
Q 024828           64 TIPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ--ANTFVGTYNYMSPERI  141 (262)
Q Consensus        64 ~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~PE~~  141 (262)
                      .++...+..++.|++.||+|||+ .|++|+||+|+||+++.++.++|+|||++.........  .....+++.|+|||.+
T Consensus       168 ~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  246 (344)
T 1rjb_A          168 VLTFEDLLCFAYQVAKGMEFLEF-KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL  246 (344)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHH-TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHh
Confidence            27899999999999999999999 99999999999999999999999999999765433221  2233567789999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCC
Q 024828          142 SGGKYGYKSDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQR  220 (262)
Q Consensus       142 ~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  220 (262)
                      .+..++.++||||||+++|+|++ |..||.......      .....+..+..+ ..+..+++++.+|+.+||..||.+|
T Consensus       247 ~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~R  319 (344)
T 1rjb_A          247 FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA------NFYKLIQNGFKM-DQPFYATEEIYIIMQSCWAFDSRKR  319 (344)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH------HHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCCchhC
Confidence            88889999999999999999998 999998765432      122222333322 3335689999999999999999999


Q ss_pred             CCHHHHhcCc
Q 024828          221 LSAQELMTHP  230 (262)
Q Consensus       221 pt~~~~l~h~  230 (262)
                      ||+++++++-
T Consensus       320 ps~~~l~~~l  329 (344)
T 1rjb_A          320 PSFPNLTSFL  329 (344)
T ss_dssp             CCHHHHHHHH
T ss_pred             cCHHHHHHHH
Confidence            9999998864


No 167
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.7e-41  Score=280.93  Aligned_cols=212  Identities=25%  Similarity=0.400  Sum_probs=149.3

Q ss_pred             HHhcCCCCeeEeeceEEEE----CCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCCeeeCC
Q 024828           21 INQSSQCPYVVVCYQSFYS----NGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICEQVLKGLLYLHHEKHIIHRD   94 (262)
Q Consensus        21 ~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~d   94 (262)
                      .++.++||||+++++++..    +...++||||++|++|.+++.+.+  .+++..+..++.|++.||.|||+ .|++|+|
T Consensus        75 ~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~-~~ivH~d  153 (336)
T 3fhr_A           75 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS-HNIAHRD  153 (336)
T ss_dssp             HHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH-TTEECSC
T ss_pred             HHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCC
Confidence            3566799999999999976    455899999999999999998764  69999999999999999999999 9999999


Q ss_pred             CCCCCEEEccC---CcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 024828           95 LKPSNLLINHR---GEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYSP  171 (262)
Q Consensus        95 l~p~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  171 (262)
                      |+|+||+++.+   +.++|+|||++......  ......+++.|+|||.+.+..++.++||||||+++|+|++|..||..
T Consensus       154 lkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  231 (336)
T 3fhr_A          154 VKPENLLYTSKEKDAVLKLTDFGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS  231 (336)
T ss_dssp             CSGGGEEESCSSTTCCEEECCCTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CCHHHEEEEecCCCceEEEeccccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            99999999764   45999999998765432  22345678999999999888899999999999999999999999976


Q ss_pred             CCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          172 PEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      ................. ....+......+++++.+|+.+||+.||.+|||++++++||||+...
T Consensus       232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          232 NTGQAISPGMKRRIRLG-QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             --------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             ccchhhhhhHHHhhhcc-ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            55433211111111111 11122222346899999999999999999999999999999998654


No 168
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=2.5e-41  Score=275.17  Aligned_cols=218  Identities=20%  Similarity=0.292  Sum_probs=178.9

Q ss_pred             HHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhh
Q 024828            9 ESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ....+.+.+|+++++.+ +|++++++++++.++...++||||+ +++|.+++...+ +++...+..++.|++.||+|||+
T Consensus        46 ~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~  124 (298)
T 1csn_A           46 RSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE  124 (298)
T ss_dssp             CTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34455788999999999 7999999999999999999999999 889999998754 59999999999999999999998


Q ss_pred             cCCeeeCCCCCCCEEEccCCc-----EEEEecccccccccCCC-------CcccccccccccCcccccCCCCCcchhHHH
Q 024828           87 EKHIIHRDLKPSNLLINHRGE-----VKITDFGVSAIMASTSG-------QANTFVGTYNYMSPERISGGKYGYKSDIWS  154 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~-----~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s  154 (262)
                       .|++|+||+|+||+++.++.     ++|+|||++........       ......|+..|+|||.+.+..++.++||||
T Consensus       125 -~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s  203 (298)
T 1csn_A          125 -KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEA  203 (298)
T ss_dssp             -TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHH
T ss_pred             -CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHH
Confidence             99999999999999987765     99999999976654322       233456899999999999888999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          155 LGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       155 lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      ||+++|+|++|+.||....................... .......+++++.+++.+||+.||++|||++++++.
T Consensus       204 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          204 LGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP-LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC-HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc-HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            99999999999999988654433222222222221111 111124688999999999999999999999999753


No 169
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=3.3e-41  Score=270.88  Aligned_cols=208  Identities=27%  Similarity=0.489  Sum_probs=170.3

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH-   89 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~-   89 (262)
                      ..+.+.+|+++++.++||||+++++++.+++..++||||+++++|.+++.. ++++...+..++.|++.||+|||+ .| 
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~-~~~  126 (271)
T 3dtc_A           49 TIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHD-EAI  126 (271)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHH-SSS
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh-CCC
Confidence            346788999999999999999999999999999999999999999999864 679999999999999999999999 88 


Q ss_pred             --eeeCCCCCCCEEEcc--------CCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHH
Q 024828           90 --IIHRDLKPSNLLINH--------RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVL  159 (262)
Q Consensus        90 --i~H~dl~p~nil~~~--------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l  159 (262)
                        ++|+||+|+||+++.        ++.++|+|||.+.......  .....++..|+|||.+.+..++.++|+||||+++
T Consensus       127 ~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  204 (271)
T 3dtc_A          127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLL  204 (271)
T ss_dssp             SCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred             CceeecCCchHHEEEecccccccccCcceEEccCCccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHH
Confidence              899999999999985        6789999999987654332  2244688999999999988899999999999999


Q ss_pred             HHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          160 LECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       160 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      ++|++|+.||......       ...............+..+++++.+++.+||+.||.+|||+.+++++
T Consensus       205 ~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          205 WELLTGEVPFRGIDGL-------AVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHHHHCCCTTTTSCHH-------HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhCCCCCCCCCHH-------HHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            9999999999875432       22333334444444456789999999999999999999999999864


No 170
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=4.1e-41  Score=277.01  Aligned_cols=225  Identities=25%  Similarity=0.371  Sum_probs=176.8

Q ss_pred             ccccchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECC----eEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHH
Q 024828            2 VIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNG----AISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQV   77 (262)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l   77 (262)
                      +|+...+........+|+.++++++||||+++++++.+..    .+++||||+++++|.++++. ..++...+..++.|+
T Consensus        52 vK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi  130 (322)
T 3soc_A           52 VKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETM  130 (322)
T ss_dssp             EEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHH
T ss_pred             EEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHH
Confidence            3444455566667788999999999999999999998743    47999999999999999977 569999999999999


Q ss_pred             HHHHHHHhhcC----------CeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCC-
Q 024828           78 LKGLLYLHHEK----------HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGG-  144 (262)
Q Consensus        78 ~~~l~~lh~~~----------~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~-  144 (262)
                      +.||+|||+ .          |++|+||||+||+++.++.++|+|||++........  ......+++.|+|||++.+. 
T Consensus       131 ~~al~~LH~-~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  209 (322)
T 3soc_A          131 ARGLAYLHE-DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAI  209 (322)
T ss_dssp             HHHHHHHTC-CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHh-hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhccccc
Confidence            999999998 8          999999999999999999999999999976543322  22335789999999999863 


Q ss_pred             ----CCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchh---------hHHHHHHHHhcCCCCCCCCC-----CCCHHHH
Q 024828          145 ----KYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWT---------SFYELMEAIVDQPPPSAPSD-----QFSPEFC  206 (262)
Q Consensus       145 ----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-----~~~~~l~  206 (262)
                          .++.++|||||||++|+|++|+.||.+........         ...............+....     ..++++.
T Consensus       210 ~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  289 (322)
T 3soc_A          210 NFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLC  289 (322)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHH
T ss_pred             ccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHH
Confidence                45678899999999999999999998654432111         12222233333322222211     1234599


Q ss_pred             HHHHHhhcCCcCCCCCHHHHhc
Q 024828          207 SFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       207 ~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +|+.+||+.||++|||++++++
T Consensus       290 ~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          290 ETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999976


No 171
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=5.8e-41  Score=270.98  Aligned_cols=212  Identities=25%  Similarity=0.394  Sum_probs=169.1

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ++...+.+.+|+.++++++||||+++++++. ++..++||||+++++|.+++...+ .++...+..++.|++.||.|||+
T Consensus        56 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~  134 (281)
T 1mp8_A           56 SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES  134 (281)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4667788999999999999999999999985 456899999999999999998654 69999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC-CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh-
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG-QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT-  164 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~-  164 (262)
                       .|++|+||+|+||+++.++.++|+|||++........ ......+++.|+|||.+.+..++.++|+||||+++|+|++ 
T Consensus       135 -~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~  213 (281)
T 1mp8_A          135 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH  213 (281)
T ss_dssp             -TTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTT
T ss_pred             -CCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhc
Confidence             9999999999999999999999999999876543221 1223345678999999988889999999999999999996 


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |..||......+       ....+..+.... .+..+++++.+++.+||+.||.+|||+++++++
T Consensus       214 g~~pf~~~~~~~-------~~~~i~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          214 GVKPFQGVKNND-------VIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             SCCTTTTCCGGG-------HHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCcCCHHH-------HHHHHHcCCCCC-CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999998765432       223333333333 335789999999999999999999999999763


No 172
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.6e-41  Score=283.28  Aligned_cols=214  Identities=29%  Similarity=0.457  Sum_probs=178.4

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECC-eEEEEEeecCCCCHHHHHHhcCC---------------------
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNG-AISIILEYMDGGSLADFLKKVKT---------------------   64 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~~---------------------   64 (262)
                      .....+.+.+|++++.++ +||||+++++++.+.+ ..++||||++|++|.+++.....                     
T Consensus        65 ~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (359)
T 3vhe_A           65 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGA  144 (359)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------
T ss_pred             CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccc
Confidence            455667899999999999 7999999999988754 48999999999999999987543                     


Q ss_pred             ---------------------------------------------CCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCC
Q 024828           65 ---------------------------------------------IPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSN   99 (262)
Q Consensus        65 ---------------------------------------------~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~n   99 (262)
                                                                   +++..+..++.|++.||+|||+ .|++|+||||+|
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~-~~ivH~Dikp~N  223 (359)
T 3vhe_A          145 IPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRDLAARN  223 (359)
T ss_dssp             ---------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGG
T ss_pred             cchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhh
Confidence                                                         8999999999999999999999 999999999999


Q ss_pred             EEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCccC
Q 024828          100 LLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT-GQFPYSPPEQQD  176 (262)
Q Consensus       100 il~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~  176 (262)
                      |+++.++.++|+|||++........  ......++..|+|||++.+..++.++||||||+++|+|++ |..||......+
T Consensus       224 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  303 (359)
T 3vhe_A          224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  303 (359)
T ss_dssp             EEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             EEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH
Confidence            9999999999999999976533222  2233467788999999998889999999999999999998 999998765432


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          177 GWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                            .....+..+.... .+..+++++.+++.+||+.||.+|||++++++|
T Consensus       304 ------~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          304 ------EFCRRLKEGTRMR-APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             ------HHHHHHHHTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------HHHHHHHcCCCCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence                  2222333333332 235689999999999999999999999999876


No 173
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=5.6e-41  Score=281.37  Aligned_cols=212  Identities=26%  Similarity=0.422  Sum_probs=170.3

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .+..++++.+|++++++++||||+++++++.++...++||||+++++|.+++.+.+ .++...+..++.|++.||+|||+
T Consensus        86 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  165 (373)
T 2qol_A           86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD  165 (373)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            56677899999999999999999999999999999999999999999999998764 69999999999999999999998


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCc---ccccccccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQA---NTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  163 (262)
                       .|++|+||+|+||+++.++.++|+|||++..........   ....++..|+|||.+.+..++.++||||||+++|+++
T Consensus       166 -~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ell  244 (373)
T 2qol_A          166 -MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM  244 (373)
T ss_dssp             -TTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             -CCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHH
Confidence             999999999999999999999999999987654332211   1123466899999999888999999999999999999


Q ss_pred             h-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          164 T-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       164 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      + |+.||......       .....+..+..... ...++.++.+++.+||+.||.+|||++++++
T Consensus       245 t~g~~P~~~~~~~-------~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          245 SYGERPYWEMSNQ-------DVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             TTC-CTTTTCCHH-------HHHHHHHTTEECCC-CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCCCCCHH-------HHHHHHHcCCCCCC-CccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            8 99999765432       33344444433332 3468899999999999999999999999876


No 174
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=2.4e-41  Score=284.12  Aligned_cols=212  Identities=25%  Similarity=0.396  Sum_probs=178.7

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ..+..+++.+|++++++++||||+++++++.+++..++||||+++++|.+++...+ .++...+..++.|++.||+|||+
T Consensus       152 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~  231 (377)
T 3cbl_A          152 PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES  231 (377)
T ss_dssp             CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            45667789999999999999999999999999899999999999999999998654 59999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                       .|++|+||+|+||+++.++.++|+|||++........  ......++..|+|||.+.+..++.++||||||+++|+|++
T Consensus       232 -~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t  310 (377)
T 3cbl_A          232 -KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS  310 (377)
T ss_dssp             -TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             -CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHh
Confidence             9999999999999999999999999999875432211  1112234678999999988889999999999999999998


Q ss_pred             -CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          165 -GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       165 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                       |..||......       +....+..+...+. +..+++++.+|+.+||+.||++|||++++++
T Consensus       311 ~g~~p~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          311 LGASPYPNLSNQ-------QTREFVEKGGRLPC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             TSCCSSTTSCHH-------HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCCCHH-------HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence             99999875432       23334444443333 3568999999999999999999999999975


No 175
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=5.3e-41  Score=275.71  Aligned_cols=227  Identities=27%  Similarity=0.458  Sum_probs=177.4

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEE--------------ECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFY--------------SNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAI   73 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------------~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i   73 (262)
                      +....+++.+|++++++++||||+++++++.              +....++||||+.| +|.+++.+ ++++...+..+
T Consensus        48 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~~  125 (320)
T 2i6l_A           48 DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLLEEHARLF  125 (320)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSE-EHHHHHTT-CCCCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccCC-CHHHHhhc-CCccHHHHHHH
Confidence            4566788999999999999999999998873              34678999999975 99999975 67999999999


Q ss_pred             HHHHHHHHHHHhhcCCeeeCCCCCCCEEEc-cCCcEEEEecccccccccCC---CCcccccccccccCcccccC-CCCCc
Q 024828           74 CEQVLKGLLYLHHEKHIIHRDLKPSNLLIN-HRGEVKITDFGVSAIMASTS---GQANTFVGTYNYMSPERISG-GKYGY  148 (262)
Q Consensus        74 ~~~l~~~l~~lh~~~~i~H~dl~p~nil~~-~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~-~~~~~  148 (262)
                      +.|++.||+|||+ .|++|+||+|+||+++ .++.++|+|||.+.......   .......++..|+|||.+.+ ..++.
T Consensus       126 ~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  204 (320)
T 2i6l_A          126 MYQLLRGLKYIHS-ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTK  204 (320)
T ss_dssp             HHHHHHHHHHHHH-TTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCH
T ss_pred             HHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCc
Confidence            9999999999999 9999999999999997 45689999999987654221   12233456888999998875 56899


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHH--------HHHHhc---------CCCCC----CCCCCCCHHHHH
Q 024828          149 KSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYEL--------MEAIVD---------QPPPS----APSDQFSPEFCS  207 (262)
Q Consensus       149 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~---------~~~~~----~~~~~~~~~l~~  207 (262)
                      ++|+||||+++|+|++|+.||......+........        ......         ...+.    .....+++++.+
T Consensus       205 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (320)
T 2i6l_A          205 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVD  284 (320)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHH
T ss_pred             hhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHH
Confidence            999999999999999999999876543211111100        000000         00000    011357899999


Q ss_pred             HHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          208 FISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       208 li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      |+.+||+.||.+|||++++++||||+....
T Consensus       285 li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (320)
T 2i6l_A          285 FLEQILTFSPMDRLTAEEALSHPYMSIYSF  314 (320)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred             HHHHHcCCCccccCCHHHHhCCcccccccC
Confidence            999999999999999999999999987653


No 176
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.3e-41  Score=280.93  Aligned_cols=215  Identities=20%  Similarity=0.314  Sum_probs=176.3

Q ss_pred             HHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828           10 SARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ...+++.+|+++++++ +||||+++++++.++...++||||+ +++|.+++... +.++...+..++.|++.||+|||+ 
T Consensus        46 ~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-  123 (330)
T 2izr_A           46 SRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS-  123 (330)
T ss_dssp             CSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             cchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence            3445688999999999 9999999999999999999999999 88999999874 679999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCc-----EEEEecccccccccCCCC-------cccccccccccCcccccCCCCCcchhHHHH
Q 024828           88 KHIIHRDLKPSNLLINHRGE-----VKITDFGVSAIMASTSGQ-------ANTFVGTYNYMSPERISGGKYGYKSDIWSL  155 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~-----~~l~df~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Di~sl  155 (262)
                      .|++|+||||+||+++.++.     ++|+|||++.........       .....|++.|+|||.+.+..++.++|+|||
T Consensus       124 ~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  203 (330)
T 2izr_A          124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEAL  203 (330)
T ss_dssp             TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred             CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHH
Confidence            99999999999999998887     999999999865433221       235678999999999999889999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          156 GLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       156 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |+++|+|++|+.||................... ...........++ ++.+++.+||+.||.+||+++++++
T Consensus       204 G~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          204 GHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK-RATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHH-HHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCCCCccccccccHHHHHHHHHhhh-ccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            999999999999998865443322222221111 1111111112344 8999999999999999999998876


No 177
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=1.2e-40  Score=267.34  Aligned_cols=208  Identities=16%  Similarity=0.270  Sum_probs=175.5

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEEC--CeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSN--GAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICEQVLKGLLY   83 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~   83 (262)
                      +....+.+.+|++++++++||||+++++++.+.  ...++||||+++++|.+++.+.+  .++...+..++.|++.||.|
T Consensus        47 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~  126 (271)
T 3kmu_A           47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF  126 (271)
T ss_dssp             CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence            456678899999999999999999999999876  77899999999999999998765  48999999999999999999


Q ss_pred             HhhcCC--eeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCc---chhHHHHHHH
Q 024828           84 LHHEKH--IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGY---KSDIWSLGLV  158 (262)
Q Consensus        84 lh~~~~--i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~---~~Di~slG~~  158 (262)
                      ||+ .|  ++|+||+|+||+++.++.++++|||++....     .....+++.|+|||.+.+...+.   ++||||||++
T Consensus       127 lH~-~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~i  200 (271)
T 3kmu_A          127 LHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL  200 (271)
T ss_dssp             HTT-SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHH
T ss_pred             Hhc-CCCceecCCCccceEEEcCCcceeEEeccceeeec-----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHH
Confidence            998 89  9999999999999999999999988765422     22346789999999998765444   7999999999


Q ss_pred             HHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          159 LLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       159 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +|+|++|+.||......       ...............+..+++++.+++.+||+.||++|||++++++
T Consensus       201 l~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          201 LWELVTREVPFADLSNM-------EIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHCSCTTTTSCHH-------HHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhCCCCccccChH-------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999865432       2222333333333344678999999999999999999999999975


No 178
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1e-40  Score=280.82  Aligned_cols=231  Identities=26%  Similarity=0.447  Sum_probs=177.6

Q ss_pred             cccchhHHHHHHHHHHHHHHhcCC-CC-----eeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHH
Q 024828            3 IQMNVEESARRQIAQELKINQSSQ-CP-----YVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAIC   74 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~-h~-----~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~   74 (262)
                      |.+.......+++.+|+++++.++ |+     +|+++++.+...+..|+|||++.+ +|.+++...  +.++...+..++
T Consensus        85 K~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~  163 (382)
T 2vx3_A           85 KIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFA  163 (382)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHH
T ss_pred             EEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHH
Confidence            334445566778888999988874 44     499999999999999999999965 999999876  469999999999


Q ss_pred             HHHHHHHHHHhh-cCCeeeCCCCCCCEEEc--cCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchh
Q 024828           75 EQVLKGLLYLHH-EKHIIHRDLKPSNLLIN--HRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSD  151 (262)
Q Consensus        75 ~~l~~~l~~lh~-~~~i~H~dl~p~nil~~--~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  151 (262)
                      .|++.||.|||+ +.|++|+||||+||+++  .++.++|+|||++.....   ......+++.|+|||++.+..++.++|
T Consensus       164 ~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~D  240 (382)
T 2vx3_A          164 QQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ---RIYQYIQSRFYRSPEVLLGMPYDLAID  240 (382)
T ss_dssp             HHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC---CCCSSCSCGGGCCHHHHTTCCCCTHHH
T ss_pred             HHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc---ccccccCCccccChHHHcCCCCCcHHH
Confidence            999999999994 37999999999999995  467899999999976543   233457899999999999989999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHH----HHhcCC---------CCC---------------CCCC----
Q 024828          152 IWSLGLVLLECATGQFPYSPPEQQDGWTSFYELME----AIVDQP---------PPS---------------APSD----  199 (262)
Q Consensus       152 i~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~---------~~~---------------~~~~----  199 (262)
                      ||||||++|+|++|+.||...+..+....+.....    ......         .+.               ..+.    
T Consensus       241 iwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  320 (382)
T 2vx3_A          241 MWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKL  320 (382)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhH
Confidence            99999999999999999987654432222111100    000000         000               0000    


Q ss_pred             -------------------C----CCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          200 -------------------Q----FSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       200 -------------------~----~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                                         .    .++++.+||.+||+.||++|||++|+|+||||+...+
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~~  381 (382)
T 2vx3_A          321 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD  381 (382)
T ss_dssp             HHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC---
T ss_pred             HHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCCC
Confidence                               0    0137899999999999999999999999999987653


No 179
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.8e-41  Score=270.66  Aligned_cols=216  Identities=24%  Similarity=0.455  Sum_probs=180.5

Q ss_pred             cchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 024828            5 MNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLY   83 (262)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~   83 (262)
                      ...+....+++.+|++++++++||||+++++++.+++..++||||+++++|.+++.+. +.++...+..++.|++.||.+
T Consensus        40 ~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  119 (267)
T 3t9t_A           40 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY  119 (267)
T ss_dssp             ECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHH
Confidence            3333334568899999999999999999999999999999999999999999999875 468999999999999999999


Q ss_pred             HhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC-CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           84 LHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        84 lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      ||+ .|++|+||+|+||+++.++.++|+|||.+....... .......++..|+|||.+.+..++.++|+||||+++|+|
T Consensus       120 lH~-~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  198 (267)
T 3t9t_A          120 LEE-ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV  198 (267)
T ss_dssp             HHH-TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHh-CCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHH
Confidence            999 999999999999999999999999999987553221 112233466789999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          163 AT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       163 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      ++ |+.||......       +....+..+..... +..+++++.+++.+||+.||.+|||+++++++
T Consensus       199 ~~~g~~p~~~~~~~-------~~~~~i~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          199 FSEGKIPYENRSNS-------EVVEDISTGFRLYK-PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HTTSCCTTTTCCHH-------HHHHHHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hccCCCCCCCCCHH-------HHHHHHhcCCcCCC-CccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99 89999875432       33444444433332 35678999999999999999999999999864


No 180
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=5e-41  Score=279.89  Aligned_cols=224  Identities=27%  Similarity=0.455  Sum_probs=177.4

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCe------EEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGA------ISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGL   81 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l   81 (262)
                      ++...+++.+|+.++++++||||+++++++.....      .++||||+.+ +|.+++..  .++...+..++.|++.||
T Consensus        63 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al  139 (353)
T 3coi_A           63 SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGL--KFSEEKIQYLVYQMLKGL  139 (353)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTTTS--CCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEeccccC-CHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence            55667889999999999999999999999987643      5999999975 88887753  599999999999999999


Q ss_pred             HHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHHHHH
Q 024828           82 LYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        82 ~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~  160 (262)
                      .|||+ .|++|+||+|+||+++.++.++|+|||++......   .....++..|+|||.+.+ ..++.++|+||||++++
T Consensus       140 ~~LH~-~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~  215 (353)
T 3coi_A          140 KYIHS-AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA  215 (353)
T ss_dssp             HHHHH-TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHH
T ss_pred             HHHHH-CCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHH
Confidence            99999 99999999999999999999999999998764322   234467899999999887 56899999999999999


Q ss_pred             HHHhCCCCCCCCCccCchhhHHHH--------------------HHHHhcCCC--CCCCCCCCCHHHHHHHHHhhcCCcC
Q 024828          161 ECATGQFPYSPPEQQDGWTSFYEL--------------------MEAIVDQPP--PSAPSDQFSPEFCSFISACVQKEPQ  218 (262)
Q Consensus       161 ~l~~g~~p~~~~~~~~~~~~~~~~--------------------~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~  218 (262)
                      +|++|+.||.+.+..+........                    ...+.....  .......+++++.+|+.+||+.||+
T Consensus       216 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~  295 (353)
T 3coi_A          216 EMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVD  295 (353)
T ss_dssp             HHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTT
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcc
Confidence            999999999876543221111110                    000000000  1112246789999999999999999


Q ss_pred             CCCCHHHHhcCccccccCCc
Q 024828          219 QRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       219 ~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      +|||++++++||||+.....
T Consensus       296 ~Rpt~~e~l~hp~f~~~~~~  315 (353)
T 3coi_A          296 KRLTAAQALTHPFFEPFRDP  315 (353)
T ss_dssp             TSCCHHHHHTSGGGTTTCCG
T ss_pred             cCCCHHHHhcCcchhhccCc
Confidence            99999999999999877643


No 181
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=5e-41  Score=275.20  Aligned_cols=214  Identities=26%  Similarity=0.420  Sum_probs=179.9

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC------------------CCCHH
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK------------------TIPEE   68 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------------------~~~~~   68 (262)
                      .....+.+.+|+++++++ +||||+++++++.+++..++||||+++++|.+++....                  .++..
T Consensus        66 ~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (313)
T 1t46_A           66 HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE  145 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHH
T ss_pred             hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHH
Confidence            345678899999999999 99999999999999999999999999999999998654                  48999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC--cccccccccccCcccccCCCC
Q 024828           69 YLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ--ANTFVGTYNYMSPERISGGKY  146 (262)
Q Consensus        69 ~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~  146 (262)
                      .+..++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||++.........  .....++..|+|||.+.+..+
T Consensus       146 ~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  224 (313)
T 1t46_A          146 DLLSFSYQVAKGMAFLAS-KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY  224 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHHH-CCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCC
Confidence            999999999999999999 99999999999999999999999999998765443221  223346778999999988889


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHH
Q 024828          147 GYKSDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQE  225 (262)
Q Consensus       147 ~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  225 (262)
                      +.++||||||+++++|++ |..||.......   ..   ......... ......+++++.+++.+||+.||.+|||+++
T Consensus       225 ~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~---~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  297 (313)
T 1t46_A          225 TFESDVWSYGIFLWELFSLGSSPYPGMPVDS---KF---YKMIKEGFR-MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ  297 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---HH---HHHHHHTCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCcccchh---HH---HHHhccCCC-CCCcccCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            999999999999999998 999998765432   11   122222222 2233568999999999999999999999999


Q ss_pred             HhcC
Q 024828          226 LMTH  229 (262)
Q Consensus       226 ~l~h  229 (262)
                      ++++
T Consensus       298 ll~~  301 (313)
T 1t46_A          298 IVQL  301 (313)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9864


No 182
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=8.7e-41  Score=275.63  Aligned_cols=212  Identities=26%  Similarity=0.408  Sum_probs=176.8

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC----------------CCCHHHH
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK----------------TIPEEYL   70 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------~~~~~~~   70 (262)
                      +....+++.+|+++++++ +||||+++++++.+.+..++||||+++++|.+++.+.+                .++...+
T Consensus        65 ~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (327)
T 1fvr_A           65 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL  144 (327)
T ss_dssp             -----CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHH
T ss_pred             chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHH
Confidence            455667899999999999 89999999999999999999999999999999998754                6999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcch
Q 024828           71 AAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKS  150 (262)
Q Consensus        71 ~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~  150 (262)
                      ..++.|++.||.+||+ .|++|+||+|+||+++.++.++|+|||++....... ......++..|+|||.+.+..++.++
T Consensus       145 ~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~  222 (327)
T 1fvr_A          145 LHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNS  222 (327)
T ss_dssp             HHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHH
T ss_pred             HHHHHHHHHHHHHHHh-CCccCCCCccceEEEcCCCeEEEcccCcCccccccc-cccCCCCCccccChhhhccccCCchh
Confidence            9999999999999999 999999999999999999999999999986433221 22234567789999999888889999


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          151 DIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       151 Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |+||||+++|+|++ |+.||.....       ......+..+..... +..+++++.+|+.+||..||.+|||+++++++
T Consensus       223 Di~slG~il~ellt~g~~pf~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          223 DVWSYGVLLWEIVSLGGTPYCGMTC-------AELYEKLPQGYRLEK-PLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHGGGTCCCCC-CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cchHHHHHHHHHHcCCCCCCCCCcH-------HHHHHHhhcCCCCCC-CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999998 9999987543       234444444433333 35789999999999999999999999999885


No 183
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=8.9e-41  Score=272.45  Aligned_cols=217  Identities=24%  Similarity=0.370  Sum_probs=178.1

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEEC--CeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSN--GAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ...+.+.+|++++++++||||+++++++.+.  ...++||||+++++|.+++.+. ..++...+..++.|++.||++||+
T Consensus        65 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~  144 (302)
T 4e5w_A           65 NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS  144 (302)
T ss_dssp             CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhc
Confidence            3457889999999999999999999999876  6689999999999999999554 579999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC---CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG---QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  163 (262)
                       .|++|+||+|+||+++.++.++|+|||++........   ......++..|+|||.+.+..++.++|+||||+++|+|+
T Consensus       145 -~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  223 (302)
T 4e5w_A          145 -RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL  223 (302)
T ss_dssp             -TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred             -CCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHH
Confidence             9999999999999999999999999999876544321   223345777899999999888999999999999999999


Q ss_pred             hCCCCCCCCC--------ccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          164 TGQFPYSPPE--------QQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       164 ~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +|..|+....        ..............+..+..... +..+++++.+|+.+||+.||.+|||++++++
T Consensus       224 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          224 TYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC-PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             TTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCC-CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            9998864321        11111223334444444444333 3578999999999999999999999999975


No 184
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=5.9e-41  Score=276.62  Aligned_cols=227  Identities=37%  Similarity=0.689  Sum_probs=163.9

Q ss_pred             HHHHHHHHHHHH-HHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHH
Q 024828            9 ESARRQIAQELK-INQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-----VKTIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus         9 ~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-----~~~~~~~~~~~i~~~l~~~l~   82 (262)
                      .....++.+|+. +++.++||||+++++++.+++..++||||+.+ +|.+++..     ...++...+..++.|++.||.
T Consensus        61 ~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~  139 (327)
T 3aln_A           61 EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALN  139 (327)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHH
Confidence            445556666666 77888999999999999999999999999976 99888864     467999999999999999999


Q ss_pred             HHhhcC-CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccc----cCCCCCcchhHHHHHH
Q 024828           83 YLHHEK-HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERI----SGGKYGYKSDIWSLGL  157 (262)
Q Consensus        83 ~lh~~~-~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~----~~~~~~~~~Di~slG~  157 (262)
                      +||+ . |++|+||+|+||+++.++.++|+|||++....... ......++..|+|||.+    .+..++.++|+||||+
T Consensus       140 ~lH~-~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~  217 (327)
T 3aln_A          140 HLKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGI  217 (327)
T ss_dssp             HHHH-HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------------------------------CCSHHHHHHHHH
T ss_pred             HHhc-cCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHH
Confidence            9998 7 99999999999999999999999999987654332 22234688999999998    4556899999999999


Q ss_pred             HHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCC---CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          158 VLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSA---PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       158 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      ++|+|++|+.||.......      ........+..+..   ....+++++.+|+.+||+.||.+|||++++++||||..
T Consensus       218 il~~l~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          218 TLYELATGRFPYPKWNSVF------DQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             HHHHHHHSCCCSSCC-------------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHHHHHCCCCCCCcchHH------HHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence            9999999999997643211      11112222222221   12468899999999999999999999999999999987


Q ss_pred             cCCcccchhh
Q 024828          235 YGDLNVDLSE  244 (262)
Q Consensus       235 ~~~~~~~~~~  244 (262)
                      ..+.......
T Consensus       292 ~~~~~~~~~~  301 (327)
T 3aln_A          292 YEERAVEVAC  301 (327)
T ss_dssp             HHHSCCCHHH
T ss_pred             hHhhHHHHHH
Confidence            7655444333


No 185
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.4e-40  Score=270.02  Aligned_cols=210  Identities=21%  Similarity=0.381  Sum_probs=177.7

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ....+++.+|++++++++||||+++++++ ..+..++||||+.+++|.+++...+.++...+..++.|++.||.+||+ .
T Consensus        59 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~-~  136 (291)
T 1xbb_A           59 PALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-S  136 (291)
T ss_dssp             CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHh-C
Confidence            34577899999999999999999999999 567789999999999999999998889999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC---cccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh-
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ---ANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT-  164 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~-  164 (262)
                      |++|+||+|+||+++.++.++|+|||++.........   .....++..|+|||.+.+..++.++|+||||+++|+|++ 
T Consensus       137 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~  216 (291)
T 1xbb_A          137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY  216 (291)
T ss_dssp             TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhc
Confidence            9999999999999999999999999998765433221   112345678999999988888999999999999999999 


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |+.||......       .....+..+..+.. +..+++++.+++.+||+.||.+|||+.++++
T Consensus       217 g~~p~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          217 GQKPYRGMKGS-------EVTAMLEKGERMGC-PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             TCCSSTTCCHH-------HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCCCCCCHH-------HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999875432       23344444443333 3578999999999999999999999999975


No 186
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=2e-41  Score=284.08  Aligned_cols=230  Identities=28%  Similarity=0.477  Sum_probs=176.6

Q ss_pred             cccchhHHHHHHHHHHHHHHhcCC-----------CCeeEeeceEEEECC----eEEEEEeecCCCCHHHHHHhc--CCC
Q 024828            3 IQMNVEESARRQIAQELKINQSSQ-----------CPYVVVCYQSFYSNG----AISIILEYMDGGSLADFLKKV--KTI   65 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~--~~~   65 (262)
                      |.+..+....+.+.+|++++++++           ||||+++++++...+    ..++|||++ +++|.+++...  +.+
T Consensus        50 K~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~  128 (373)
T 1q8y_A           50 KIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGI  128 (373)
T ss_dssp             EEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCC
T ss_pred             EEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCC
Confidence            334445666778899999998885           899999999998654    789999999 77999999874  459


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhcC-CeeeCCCCCCCEEEccC------CcEEEEecccccccccCCCCcccccccccccCc
Q 024828           66 PEEYLAAICEQVLKGLLYLHHEK-HIIHRDLKPSNLLINHR------GEVKITDFGVSAIMASTSGQANTFVGTYNYMSP  138 (262)
Q Consensus        66 ~~~~~~~i~~~l~~~l~~lh~~~-~i~H~dl~p~nil~~~~------~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~P  138 (262)
                      +...+..++.|++.||+|||+ . |++|+||||+||+++.+      +.++|+|||++......   .....++..|+||
T Consensus       129 ~~~~~~~i~~qi~~aL~~lH~-~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aP  204 (373)
T 1q8y_A          129 PLIYVKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSP  204 (373)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHH-TTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCH
T ss_pred             cHHHHHHHHHHHHHHHHHHHh-cCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC---CCCCCCCccccCc
Confidence            999999999999999999998 7 99999999999999533      37999999998765432   2344789999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhh---HHHHHHHHhcCCC----------------------
Q 024828          139 ERISGGKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTS---FYELMEAIVDQPP----------------------  193 (262)
Q Consensus       139 E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~----------------------  193 (262)
                      |++.+..++.++||||||+++|+|++|+.||...........   .......+ ...+                      
T Consensus       205 E~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~  283 (373)
T 1q8y_A          205 EVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL-GELPSYLLRNGKYTRTFFNSRGLLRN  283 (373)
T ss_dssp             HHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH-CSCCHHHHHHCTTHHHHBCC--CBSS
T ss_pred             HHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhc-CCCCHHHHhccchhhhhcCCcchhcc
Confidence            999998899999999999999999999999986543221111   11111111 0000                      


Q ss_pred             ---------------CCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCc
Q 024828          194 ---------------PSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       194 ---------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~  238 (262)
                                     ....+...++++.+||.+||+.||.+|||++|+++||||+.....
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  343 (373)
T 1q8y_A          284 ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM  343 (373)
T ss_dssp             CCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTC
T ss_pred             cccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccCc
Confidence                           000112345778999999999999999999999999999986543


No 187
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.3e-40  Score=269.93  Aligned_cols=216  Identities=26%  Similarity=0.453  Sum_probs=167.2

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      +....+.+.+|++++++++||||++++++. .....++||||+.+++|.+++... ..++...+..++.|++.||.|||+
T Consensus        60 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~  138 (289)
T 3og7_A           60 TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA  138 (289)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            566778899999999999999999999954 556689999999999999999644 569999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccC--CCCcccccccccccCccccc---CCCCCcchhHHHHHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMAST--SGQANTFVGTYNYMSPERIS---GGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~~  161 (262)
                       .|++|+||+|+||+++.++.++|+|||++......  ........++..|+|||.+.   +..++.++||||||+++++
T Consensus       139 -~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e  217 (289)
T 3og7_A          139 -KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE  217 (289)
T ss_dssp             -TTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHH
T ss_pred             -CCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHH
Confidence             99999999999999999999999999998754321  12223346899999999986   5568889999999999999


Q ss_pred             HHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          162 CATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       162 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |++|+.||......+   .....................+++++.+|+.+||+.||.+|||++++++
T Consensus       218 l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          218 LMTGQLPYSNINNRD---QIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHSSCTTSSCCCHH---HHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHCCCCccccchHH---HHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            999999998754432   1222222211122222233578899999999999999999999999975


No 188
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=5.4e-41  Score=271.93  Aligned_cols=217  Identities=24%  Similarity=0.399  Sum_probs=181.8

Q ss_pred             cccchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHH
Q 024828            3 IQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAICEQVLKG   80 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~   80 (262)
                      |....+....+++.+|++++++++||||+++++++.++...++||||++|++|.+++...  ..++...+..++.|++.|
T Consensus        44 K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~  123 (288)
T 3kfa_A           44 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA  123 (288)
T ss_dssp             EEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHH
T ss_pred             EecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHH
Confidence            334445556788999999999999999999999999999999999999999999999874  358999999999999999


Q ss_pred             HHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC-CcccccccccccCcccccCCCCCcchhHHHHHHHH
Q 024828           81 LLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG-QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVL  159 (262)
Q Consensus        81 l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l  159 (262)
                      |.+||+ .|++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+..++.++|+||||+++
T Consensus       124 l~~lH~-~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  202 (288)
T 3kfa_A          124 MEYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL  202 (288)
T ss_dssp             HHHHHH-HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHHHH-CCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHH
Confidence            999999 9999999999999999999999999999876543321 12223456789999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          160 LECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       160 ~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      ++|++ |..||...+...       ....+...... ..+..+++++.+|+.+||..||.+|||++++++
T Consensus       203 ~~ll~~g~~p~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          203 WEIATYGMSPYPGIDLSQ-------VYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHHTTSCCSSTTCCGGG-------HHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHH-------HHHHHhccCCC-CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            99999 999998765432       22233333332 233578999999999999999999999999976


No 189
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.1e-40  Score=268.47  Aligned_cols=213  Identities=27%  Similarity=0.442  Sum_probs=180.3

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      +....+++.+|++++++++||||+++++++ ..+..++|||++.+++|.+++... ..++...+..++.|++.||.+||+
T Consensus        50 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~  128 (287)
T 1u59_A           50 EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE  128 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHH
Confidence            466788899999999999999999999999 556799999999999999999654 569999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC---CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG---QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  163 (262)
                       .|++|+||+|+||+++.++.++|+|||++........   ......++..|+|||.+.+..++.++|+||||+++|+|+
T Consensus       129 -~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell  207 (287)
T 1u59_A          129 -KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL  207 (287)
T ss_dssp             -TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             -CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence             9999999999999999999999999999876543321   122234578899999998888999999999999999999


Q ss_pred             h-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCc
Q 024828          164 T-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHP  230 (262)
Q Consensus       164 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~  230 (262)
                      + |+.||......       +....+..+..+.. +..+++++.+++.+||+.||.+|||+.+++++.
T Consensus       208 t~g~~p~~~~~~~-------~~~~~i~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          208 SYGQKPYKKMKGP-------EVMAFIEQGKRMEC-PPECPPELYALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             TTSCCTTTTCCTH-------HHHHHHHTTCCCCC-CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             cCCCCCcccCCHH-------HHHHHHhcCCcCCC-CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            8 99999875442       23344444443333 357899999999999999999999999999864


No 190
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=2.5e-40  Score=272.25  Aligned_cols=213  Identities=23%  Similarity=0.403  Sum_probs=180.5

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc----------CCCCHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV----------KTIPEEYLAAICEQV   77 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~----------~~~~~~~~~~i~~~l   77 (262)
                      ......++.+|++++++++||||+++++++.+++..++||||+++++|.+++...          ..++...+..++.|+
T Consensus        68 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi  147 (322)
T 1p4o_A           68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI  147 (322)
T ss_dssp             CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHH
Confidence            4456678999999999999999999999999999999999999999999999753          356999999999999


Q ss_pred             HHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCCCCCcchhHHHH
Q 024828           78 LKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGGKYGYKSDIWSL  155 (262)
Q Consensus        78 ~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~sl  155 (262)
                      +.||.+||+ .|++|+||+|+||+++.++.++|+|||++........  ......++..|+|||.+.+..++.++|+|||
T Consensus       148 ~~~l~~lH~-~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  226 (322)
T 1p4o_A          148 ADGMAYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF  226 (322)
T ss_dssp             HHHHHHHHH-TTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHHHHHH-CCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHH
Confidence            999999999 9999999999999999999999999999876543221  1223356788999999988889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          156 GLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       156 G~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |+++|+|++ |..||......       .....+..+..... ...+++++.+++.+||+.||.+|||+.+++++
T Consensus       227 G~il~el~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          227 GVVLWEIATLAEQPYQGLSNE-------QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             HHHHHHHHHTSCCTTTTSCHH-------HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhcCCCccccCCHH-------HHHHHHHcCCcCCC-CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999 89999765432       33344444443333 35789999999999999999999999999986


No 191
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-40  Score=273.22  Aligned_cols=213  Identities=25%  Similarity=0.386  Sum_probs=175.9

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .+..+.++.+|++++++++||||+++++++.+.+..++||||+++++|.+++... +.++...+..++.|++.||.+||+
T Consensus        86 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  165 (333)
T 1mqb_A           86 TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN  165 (333)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4566778999999999999999999999999999999999999999999999765 579999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC---cccccccccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ---ANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECA  163 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  163 (262)
                       .|++|+||+|+||+++.++.++|+|||++.........   .....++..|+|||.+.+..++.++||||||+++|+|+
T Consensus       166 -~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell  244 (333)
T 1mqb_A          166 -MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVM  244 (333)
T ss_dssp             -TTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHH
T ss_pred             -CCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHH
Confidence             99999999999999999999999999998765433211   11223567899999999888999999999999999999


Q ss_pred             h-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          164 T-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       164 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      + |+.||.....       .+....+..+..... +..+++++.+++.+||+.||.+||++.+++++
T Consensus       245 t~g~~pf~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          245 TYGERPYWELSN-------HEVMKAINDGFRLPT-PMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             TTSCCTTTTCCH-------HHHHHHHHTTCCCCC-CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             cCCCCCcccCCH-------HHHHHHHHCCCcCCC-cccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8 9999976543       233444444443333 35689999999999999999999999999874


No 192
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=9e-40  Score=267.54  Aligned_cols=213  Identities=27%  Similarity=0.409  Sum_probs=170.6

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ++...+.+.+|++++++++||||+++++++.+++..++||||++|++|.+++.+.+.++...+..++.|++.||.|||+ 
T Consensus        74 ~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-  152 (309)
T 2h34_A           74 DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHA-  152 (309)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            4556788999999999999999999999999999999999999999999999988899999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCC-CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                      .|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+..++.++|+||||+++|+|++|+
T Consensus       153 ~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  232 (309)
T 2h34_A          153 AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS  232 (309)
T ss_dssp             TTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSS
T ss_pred             CcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCC
Confidence            999999999999999999999999999987654322 1223446889999999999888999999999999999999999


Q ss_pred             CCCCCCCccCchhhHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHhhcCCcCCCC-CHHHHhc
Q 024828          167 FPYSPPEQQDGWTSFYELMEAIVDQPP-PSAPSDQFSPEFCSFISACVQKEPQQRL-SAQELMT  228 (262)
Q Consensus       167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rp-t~~~~l~  228 (262)
                      .||......       .....+..... +......+++++.+++.+||+.||++|| |++++++
T Consensus       233 ~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          233 PPYQGDQLS-------VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             CSSCSCHHH-------HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             CCCCCchHH-------HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            999864321       22222222222 2223457899999999999999999999 7887765


No 193
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=7.7e-41  Score=275.93  Aligned_cols=218  Identities=24%  Similarity=0.395  Sum_probs=182.6

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-------TIPEEYLAAICEQVLKG   80 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-------~~~~~~~~~i~~~l~~~   80 (262)
                      .+....++.+|+.++++++||||+++++++.+....++||||+++++|.+++....       .++...+..++.|++.|
T Consensus        73 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a  152 (327)
T 2yfx_A           73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG  152 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHH
Confidence            45667789999999999999999999999999999999999999999999998763       48999999999999999


Q ss_pred             HHHHhhcCCeeeCCCCCCCEEEccC---CcEEEEecccccccccCC--CCcccccccccccCcccccCCCCCcchhHHHH
Q 024828           81 LLYLHHEKHIIHRDLKPSNLLINHR---GEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGKYGYKSDIWSL  155 (262)
Q Consensus        81 l~~lh~~~~i~H~dl~p~nil~~~~---~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~sl  155 (262)
                      |.|||+ .|++|+||+|+||+++.+   ..++|+|||++.......  .......++..|+|||.+.+..++.++|||||
T Consensus       153 l~~LH~-~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  231 (327)
T 2yfx_A          153 CQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF  231 (327)
T ss_dssp             HHHHHH-TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHhh-CCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHH
Confidence            999999 999999999999999844   469999999987543322  22233467889999999988889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          156 GLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       156 G~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      |+++|+|++ |..||......       .....+..+.... ....+++.+.+++.+||+.||.+|||+++++++.|+-.
T Consensus       232 G~il~ellt~g~~p~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          232 GVLLWEIFSLGYMPYPSKSNQ-------EVLEFVTSGGRMD-PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             HHHHHHHHTTSCCSSTTCCHH-------HHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCCcCHH-------HHHHHHhcCCCCC-CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence            999999998 99999765432       3334444444333 33578999999999999999999999999999988643


No 194
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=2.6e-40  Score=273.52  Aligned_cols=213  Identities=23%  Similarity=0.414  Sum_probs=180.6

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC----------------CCCHHHH
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK----------------TIPEEYL   70 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------~~~~~~~   70 (262)
                      .+...+++.+|+++++++ +||||+++++++.+.+..++||||+.+++|.+++....                .++...+
T Consensus        80 ~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (334)
T 2pvf_A           80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL  159 (334)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHH
T ss_pred             cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHH
Confidence            456678899999999999 89999999999999999999999999999999998754                3899999


Q ss_pred             HHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCCCCCc
Q 024828           71 AAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGGKYGY  148 (262)
Q Consensus        71 ~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~  148 (262)
                      ..++.|++.||+|||+ .|++|+||+|+||+++.++.++|+|||++........  ......++..|+|||.+.+..++.
T Consensus       160 ~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  238 (334)
T 2pvf_A          160 VSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH  238 (334)
T ss_dssp             HHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECH
T ss_pred             HHHHHHHHHHHHHHHh-CCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcCh
Confidence            9999999999999999 9999999999999999999999999999876543321  122335677899999998888999


Q ss_pred             chhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHh
Q 024828          149 KSDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELM  227 (262)
Q Consensus       149 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l  227 (262)
                      ++||||||+++|+|++ |..||......       +....+..+.... .+..+++++.+++.+||+.||.+|||+++++
T Consensus       239 ~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  310 (334)
T 2pvf_A          239 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-------ELFKLLKEGHRMD-KPANCTNELYMMMRDCWHAVPSQRPTFKQLV  310 (334)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCHH-------HHHHHHHHTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcCcCCHH-------HHHHHHhcCCCCC-CCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            9999999999999999 99999765432       2333333343333 2357899999999999999999999999998


Q ss_pred             cC
Q 024828          228 TH  229 (262)
Q Consensus       228 ~h  229 (262)
                      ++
T Consensus       311 ~~  312 (334)
T 2pvf_A          311 ED  312 (334)
T ss_dssp             HH
T ss_pred             HH
Confidence            75


No 195
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.1e-40  Score=289.13  Aligned_cols=212  Identities=25%  Similarity=0.410  Sum_probs=179.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      +....+++.+|++++++++||||+++++++.+....++||||+++++|.+++.+.  ..++...+..++.|++.||+|||
T Consensus       256 ~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH  335 (495)
T 1opk_A          256 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE  335 (495)
T ss_dssp             SSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3345678999999999999999999999999999999999999999999999864  45899999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC-CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           86 HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                      + .|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+..++.++||||||+++|+|++
T Consensus       336 ~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t  414 (495)
T 1opk_A          336 K-KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT  414 (495)
T ss_dssp             H-TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             h-CCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHh
Confidence            9 999999999999999999999999999987653221 11122345678999999998889999999999999999999


Q ss_pred             -CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          165 -GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       165 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                       |..||...+..+       ....+..+.... .+..+++++.+||.+||+.||.+|||+.++++
T Consensus       415 ~g~~p~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          415 YGMSPYPGIDLSQ-------VYELLEKDYRME-RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             TSCCSSTTCCGGG-------HHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCCCHHH-------HHHHHHcCCCCC-CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence             999998765432       223333333333 23578999999999999999999999999976


No 196
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-39  Score=265.08  Aligned_cols=213  Identities=21%  Similarity=0.340  Sum_probs=176.0

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeE-EEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAI-SIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      .+....+.+.+|++++++++||||+++++++.+.+.. ++|+||+.+++|.+++... ..++...+..++.|++.||+||
T Consensus        61 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  140 (298)
T 3pls_A           61 TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL  140 (298)
T ss_dssp             CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence            3456678899999999999999999999999876554 9999999999999999874 5689999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccC----CCCcccccccccccCcccccCCCCCcchhHHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMAST----SGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~  160 (262)
                      |+ .|++|+||+|+||+++.++.++|+|||++......    ........++..|+|||.+.+..++.++|+||||+++|
T Consensus       141 H~-~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  219 (298)
T 3pls_A          141 AE-QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLW  219 (298)
T ss_dssp             HH-TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             Hh-CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHH
Confidence            99 99999999999999999999999999998754322    12233446788999999999888999999999999999


Q ss_pred             HHHhCCCC-CCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          161 ECATGQFP-YSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       161 ~l~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +|++|..| |...+..       .....+....... .+..+++++.+++.+||+.||.+|||++++++
T Consensus       220 ~l~~g~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          220 ELLTRGAPPYRHIDPF-------DLTHFLAQGRRLP-QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHTSCCTTTTSCGG-------GHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhhCCCCCCccCCHH-------HHHHHhhcCCCCC-CCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99995554 5443322       2223333333332 34568999999999999999999999999976


No 197
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=3e-40  Score=271.70  Aligned_cols=221  Identities=23%  Similarity=0.314  Sum_probs=178.1

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHH
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK----TIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      ....+++.+|++++++++||||+++++++.+++..++||||+++++|.+++....    .++...+..++.|++.||+||
T Consensus        76 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  155 (321)
T 2qkw_B           76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL  155 (321)
T ss_dssp             SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh
Confidence            3456789999999999999999999999999999999999999999999986543    589999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC--CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      |+ .|++|+||+|+||+++.++.++|+|||++.......  .......|+..|+|||.+.+..++.++||||||+++|+|
T Consensus       156 H~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el  234 (321)
T 2qkw_B          156 HT-RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV  234 (321)
T ss_dssp             HH-TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHH
T ss_pred             cC-CCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHH
Confidence            99 999999999999999999999999999987643222  122334588999999999888899999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCC--------CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCc
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPP--------SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHP  230 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~  230 (262)
                      ++|+.||......+..............+...        .......+..+.+++.+||+.||++|||+++++++-
T Consensus       235 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             HHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            99999998765543322211111111111111        111122356789999999999999999999999763


No 198
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=1e-40  Score=286.70  Aligned_cols=214  Identities=25%  Similarity=0.439  Sum_probs=178.1

Q ss_pred             cchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHH
Q 024828            5 MNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~   82 (262)
                      +..+....+++.+|++++++++||||+++++++. ....++||||+.+++|.+++...  ..++...+..++.|++.||+
T Consensus       220 ~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~  298 (454)
T 1qcf_A          220 MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA  298 (454)
T ss_dssp             ECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred             ecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence            3333445778999999999999999999999986 56789999999999999999754  36899999999999999999


Q ss_pred             HHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC-CCcccccccccccCcccccCCCCCcchhHHHHHHHHHH
Q 024828           83 YLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        83 ~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  161 (262)
                      |||+ .|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+..++.++||||||+++|+
T Consensus       299 ~LH~-~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~e  377 (454)
T 1qcf_A          299 FIEQ-RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME  377 (454)
T ss_dssp             HHHH-TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHh-CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHH
Confidence            9999 999999999999999999999999999997653221 11122345678999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          162 CAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       162 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |++ |+.||.+....       +....+..+...+. +..+++++.+||.+||+.||++|||++++++
T Consensus       378 l~t~g~~P~~~~~~~-------~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          378 IVTYGRIPYPGMSNP-------EVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHTTSCCSSTTCCHH-------HHHHHHHHTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHH-------HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            999 99999875432       33344444444333 3578999999999999999999999999975


No 199
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=3.1e-40  Score=272.34  Aligned_cols=220  Identities=24%  Similarity=0.426  Sum_probs=180.9

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEE--ECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFY--SNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      +....+.+.+|++++++++||||+++++++.  +....++||||+++++|.+++... ..++...+..++.|++.||+||
T Consensus        64 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l  143 (327)
T 3lxl_A           64 GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL  143 (327)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            4566778999999999999999999999886  456799999999999999999874 5699999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC---CcccccccccccCcccccCCCCCcchhHHHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG---QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  161 (262)
                      |+ .|++|+||+|+||+++.++.++|+|||.+........   ......++..|+|||.+.+..++.++||||||+++++
T Consensus       144 H~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  222 (327)
T 3lxl_A          144 GS-RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE  222 (327)
T ss_dssp             HH-TTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             Hh-CCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHH
Confidence            99 9999999999999999999999999999976543321   2223457778999999998889999999999999999


Q ss_pred             HHhCCCCCCCCCcc--------CchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          162 CATGQFPYSPPEQQ--------DGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       162 l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |++|..||......        ...............+..... +..+++++.+|+.+||+.||.+|||+++++++
T Consensus       223 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          223 LFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA-PPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCC-CCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999998653321        111222333444444444333 46789999999999999999999999999654


No 200
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=1.6e-40  Score=274.56  Aligned_cols=213  Identities=28%  Similarity=0.419  Sum_probs=178.0

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--------------CCCCHHHHHH
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--------------KTIPEEYLAA   72 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--------------~~~~~~~~~~   72 (262)
                      .....+.+.+|+++++++ +||||+++++++.+++..++||||+++++|.+++...              ..++...+..
T Consensus        89 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (333)
T 2i1m_A           89 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH  168 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHH
Confidence            446678899999999999 8999999999999999999999999999999999753              3579999999


Q ss_pred             HHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC--cccccccccccCcccccCCCCCcch
Q 024828           73 ICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ--ANTFVGTYNYMSPERISGGKYGYKS  150 (262)
Q Consensus        73 i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~  150 (262)
                      ++.|++.||+|||+ .|++|+||+|+||+++.++.++|+|||++.........  .....++..|+|||.+.+..++.++
T Consensus       169 ~~~qi~~~l~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  247 (333)
T 2i1m_A          169 FSSQVAQGMAFLAS-KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS  247 (333)
T ss_dssp             HHHHHHHHHHHHHH-TTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHHHHhc-CCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHH
Confidence            99999999999999 99999999999999999999999999998765433221  2233467789999999888899999


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          151 DIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       151 Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      ||||||+++|+|++ |..||.......   ...   ........ ...+...++++.+++.+||+.||.+|||++++++
T Consensus       248 Di~slG~il~el~t~g~~p~~~~~~~~---~~~---~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          248 DVWSYGILLWEIFSLGLNPYPGILVNS---KFY---KLVKDGYQ-MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSTTCCSSH---HHH---HHHHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCcccchhH---HHH---HHHhcCCC-CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            99999999999998 999998755432   111   12222222 2233567899999999999999999999999986


No 201
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=2.2e-40  Score=273.23  Aligned_cols=212  Identities=25%  Similarity=0.410  Sum_probs=175.9

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      +....+++.+|+.++++++||||+++++++.++. .++|++++.+++|.+++... +.++...+..++.|++.||+|||+
T Consensus        57 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~  135 (327)
T 3poz_A           57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED  135 (327)
T ss_dssp             ---CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            3455678999999999999999999999998765 78999999999999999874 579999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC--cccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ--ANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                       .|++|+||||+||+++.++.++|+|||++.........  .....++..|+|||.+.+..++.++||||||+++|+|++
T Consensus       136 -~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  214 (327)
T 3poz_A          136 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT  214 (327)
T ss_dssp             -TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             -CCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHh
Confidence             99999999999999999999999999999765433222  222345778999999998889999999999999999999


Q ss_pred             -CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          165 -GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       165 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                       |+.||......+       ....+..+.... .+..++.++.+++.+||+.||.+|||+.+++++
T Consensus       215 ~g~~p~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          215 FGSKPYDGIPASE-------ISSILEKGERLP-QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             TSCCTTTTCCGGG-------HHHHHHTTCCCC-CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             cCCCCccCCCHHH-------HHHHHHcCCCCC-CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence             999998765432       223333333333 335688999999999999999999999999875


No 202
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=5.8e-40  Score=269.02  Aligned_cols=213  Identities=22%  Similarity=0.361  Sum_probs=171.9

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECC-----eEEEEEeecCCCCHHHHHHh------cCCCCHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNG-----AISIILEYMDGGSLADFLKK------VKTIPEEYLAAICEQ   76 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~------~~~~~~~~~~~i~~~   76 (262)
                      +....+.+.+|++++++++||||+++++++.+..     ..++||||+.+++|.+++..      ...++...+..++.|
T Consensus        76 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~q  155 (313)
T 3brb_A           76 SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD  155 (313)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHH
Confidence            4566778999999999999999999999997654     35999999999999999943      356999999999999


Q ss_pred             HHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC--CCcccccccccccCcccccCCCCCcchhHHH
Q 024828           77 VLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--GQANTFVGTYNYMSPERISGGKYGYKSDIWS  154 (262)
Q Consensus        77 l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s  154 (262)
                      ++.||.|||+ .|++|+||+|+||+++.++.++|+|||++.......  .......++..|+|||.+.+..++.++|+||
T Consensus       156 i~~aL~~LH~-~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  234 (313)
T 3brb_A          156 IALGMEYLSN-RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWA  234 (313)
T ss_dssp             HHHHHHHHHT-TTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHH
T ss_pred             HHHHHHHHHh-CCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHH
Confidence            9999999998 999999999999999999999999999987654322  1222345677899999999888999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          155 LGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       155 lG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      ||+++|+|++ |..||......+       ....+..+..+.. +..+++++.+++.+||..||.+|||+++++++
T Consensus       235 lG~il~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          235 FGVTMWEIATRGMTPYPGVQNHE-------MYDYLLHGHRLKQ-PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             HHHHHHHHHTTSCCSSTTCCGGG-------HHHHHHTTCCCCC-BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCccCCHHH-------HHHHHHcCCCCCC-CccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999 899998765432       2233334433333 35789999999999999999999999999864


No 203
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=5e-40  Score=270.10  Aligned_cols=218  Identities=25%  Similarity=0.391  Sum_probs=179.2

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE--CCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYS--NGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      .....+.+.+|++++++++||||+++++++.+  ....++||||+++++|.+++.+. +++...+..++.|++.||++||
T Consensus        73 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH  151 (318)
T 3lxp_A           73 GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLH  151 (318)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            45677889999999999999999999999988  46789999999999999999774 5999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC---CcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           86 HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG---QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      + .|++|+||+|+||+++.++.++|+|||.+........   ......++..|+|||.+.+..++.++||||||+++++|
T Consensus       152 ~-~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  230 (318)
T 3lxp_A          152 A-QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL  230 (318)
T ss_dssp             H-TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             h-CCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHH
Confidence            9 9999999999999999999999999999976643321   12234567789999999988899999999999999999


Q ss_pred             HhCCCCCCCCCcc--------CchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          163 ATGQFPYSPPEQQ--------DGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       163 ~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      ++|..||......        ............+...... ..+..+++++.+|+.+||+.||.+|||++++++
T Consensus       231 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          231 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL-PRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCC-CCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            9999998753221        0111222233333334333 334678999999999999999999999999984


No 204
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=6.1e-41  Score=286.48  Aligned_cols=217  Identities=24%  Similarity=0.365  Sum_probs=163.4

Q ss_pred             HHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCC-------HHHHHHHHHHHHHHHHH
Q 024828           12 RRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIP-------EEYLAAICEQVLKGLLY   83 (262)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~-------~~~~~~i~~~l~~~l~~   83 (262)
                      .+.+.+|+++++++ +||||+++++.+.+++..|+||||+.| +|.+++...+...       ...+..++.|++.||+|
T Consensus        52 ~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~  130 (434)
T 2rio_A           52 CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH  130 (434)
T ss_dssp             HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHTC------------CCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCC-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHH
Confidence            35678999999876 899999999999999999999999965 9999998764332       22356799999999999


Q ss_pred             HhhcCCeeeCCCCCCCEEEccC-------------CcEEEEecccccccccCCC----CcccccccccccCcccccC---
Q 024828           84 LHHEKHIIHRDLKPSNLLINHR-------------GEVKITDFGVSAIMASTSG----QANTFVGTYNYMSPERISG---  143 (262)
Q Consensus        84 lh~~~~i~H~dl~p~nil~~~~-------------~~~~l~df~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~---  143 (262)
                      ||+ .|++|+||||+||+++.+             +.++|+|||++........    ......|++.|+|||++.+   
T Consensus       131 LH~-~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  209 (434)
T 2rio_A          131 LHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNN  209 (434)
T ss_dssp             HHH-TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCT
T ss_pred             HHH-CCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccc
Confidence            999 999999999999999754             3799999999987644321    1223578999999999875   


Q ss_pred             ----CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHhhcCCc
Q 024828          144 ----GKYGYKSDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPP-PSAPSDQFSPEFCSFISACVQKEP  217 (262)
Q Consensus       144 ----~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p  217 (262)
                          ..++.++|||||||++|+|++ |..||......     ............. .......+++++.+|+.+||+.||
T Consensus       210 ~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  284 (434)
T 2rio_A          210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-----ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDP  284 (434)
T ss_dssp             TSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-----HHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSG
T ss_pred             cccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-----HHHHhcCCCCcccccccccccchHHHHHHHHHHhhCCh
Confidence                568999999999999999998 99999754321     1111111111100 011111345789999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q 024828          218 QQRLSAQELMTHPFLKMY  235 (262)
Q Consensus       218 ~~Rpt~~~~l~h~~~~~~  235 (262)
                      .+|||+.++++||||...
T Consensus       285 ~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          285 LKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             GGSCCHHHHHTSGGGSCH
T ss_pred             hhCCCHHHHHhCCccCCc
Confidence            999999999999999643


No 205
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=2.3e-40  Score=267.10  Aligned_cols=214  Identities=26%  Similarity=0.458  Sum_probs=177.9

Q ss_pred             cchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHH
Q 024828            5 MNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~   82 (262)
                      ...+....+.+.+|++++++++||||+++++++.+ +..++||||+.+++|.+++....  .++...+..++.|++.||+
T Consensus        45 ~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~  123 (279)
T 1qpc_A           45 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA  123 (279)
T ss_dssp             ECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred             ecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence            33334456789999999999999999999998864 45899999999999999997653  6999999999999999999


Q ss_pred             HHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC-CcccccccccccCcccccCCCCCcchhHHHHHHHHHH
Q 024828           83 YLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG-QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        83 ~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  161 (262)
                      +||+ .|++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+..++.++|+||||+++++
T Consensus       124 ~lH~-~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  202 (279)
T 1qpc_A          124 FIEE-RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE  202 (279)
T ss_dssp             HHHH-TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             HHHH-CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHH
Confidence            9999 9999999999999999999999999999876543221 1223345678999999988889999999999999999


Q ss_pred             HHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          162 CAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       162 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |++ |+.||......       +....+..+.... .+..+++++.+++.+||..||++|||++++++
T Consensus       203 l~~~g~~p~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          203 IVTHGRIPYPGMTNP-------EVIQNLERGYRMV-RPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHTTTCCSSTTCCHH-------HHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCcccCHH-------HHHHHHhcccCCC-CcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            999 99999865432       3334444443333 33578999999999999999999999999976


No 206
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=4.9e-40  Score=265.50  Aligned_cols=212  Identities=23%  Similarity=0.362  Sum_probs=174.6

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .....+++.+|++++++++||||+++++++.++ ..++||||+.+++|.+++.+.+ .++...+..++.|++.||.+||+
T Consensus        53 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~  131 (281)
T 3cc6_A           53 TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES  131 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            456778899999999999999999999998754 4689999999999999997754 59999999999999999999998


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC-CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh-
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG-QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT-  164 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~-  164 (262)
                       .|++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+..++.++|+||||+++|+|++ 
T Consensus       132 -~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~  210 (281)
T 3cc6_A          132 -INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSF  210 (281)
T ss_dssp             -TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             -CCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhC
Confidence             9999999999999999999999999999876543221 1223356778999999988889999999999999999998 


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |+.||......+       ....+....... .+..+++.+.+++.+||..||.+|||+.+++++
T Consensus       211 g~~p~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          211 GKQPFFWLENKD-------VIGVLEKGDRLP-KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             TCCTTTTSCGGG-------HHHHHHHTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCcccCChHH-------HHHHHhcCCCCC-CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            999997655432       122222232222 235689999999999999999999999999864


No 207
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=3.1e-40  Score=267.81  Aligned_cols=211  Identities=24%  Similarity=0.362  Sum_probs=177.2

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ....+++.+|++++++++||||+++++++.++. .++|+|++.+++|.+++.+. +.++...+..++.|++.||.+||+ 
T Consensus        62 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~-  139 (291)
T 1u46_A           62 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES-  139 (291)
T ss_dssp             CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHh-
Confidence            356778999999999999999999999998765 88999999999999999765 569999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC---CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG---QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                      .|++|+||+|+||+++.++.++|+|||++........   ......++..|+|||.+.+..++.++|+||||+++++|++
T Consensus       140 ~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  219 (291)
T 1u46_A          140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT  219 (291)
T ss_dssp             TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             CCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHh
Confidence            9999999999999999999999999999876543322   1123346678999999988888999999999999999999


Q ss_pred             -CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          165 -GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       165 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                       |+.||......       .....+............+++++.+++.+||..||.+|||+.++++
T Consensus       220 ~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          220 YGQEPWIGLNGS-------QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             TSCCTTTTCCHH-------HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCcccCCHH-------HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence             99999875432       3344444444444444678999999999999999999999999986


No 208
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=1.3e-40  Score=268.52  Aligned_cols=213  Identities=23%  Similarity=0.406  Sum_probs=170.1

Q ss_pred             ccchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE-CCeEEEEEeecCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHH
Q 024828            4 QMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYS-NGAISIILEYMDGGSLADFLKKVKT--IPEEYLAAICEQVLKG   80 (262)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~i~~~l~~~   80 (262)
                      |....+...+++.+|++++++++||||+++++++.+ ++..++||||+++++|.+++.+.+.  ++...+..++.|++.|
T Consensus        50 K~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~  129 (278)
T 1byg_A           50 KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA  129 (278)
T ss_dssp             EECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred             EEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHH
Confidence            333334466789999999999999999999998654 4578999999999999999987643  8999999999999999


Q ss_pred             HHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHH
Q 024828           81 LLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        81 l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~  160 (262)
                      |++||+ .|++|+||+|+||+++.++.++|+|||++.......   ....++..|+|||.+.+..++.++|+||||++++
T Consensus       130 l~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  205 (278)
T 1byg_A          130 MEYLEG-NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW  205 (278)
T ss_dssp             HHHHHH-TTCCCSCCSGGGEEECTTSCEEECCCCC---------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHh-CCccccCCCcceEEEeCCCcEEEeeccccccccccc---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHH
Confidence            999999 999999999999999999999999999987544322   2335678899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          161 ECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       161 ~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +|++ |+.||......+       ....+..+... ..+..+++++.+++.+||+.||.+|||+.++++
T Consensus       206 ~l~t~g~~p~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          206 EIYSFGRVPYPRIPLKD-------VVPRVEKGYKM-DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHTTSCCSCTTSCGGG-------HHHHHTTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHH-------HHHHHhcCCCC-CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            9998 999998754432       22333333333 333578999999999999999999999999975


No 209
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=2.5e-39  Score=262.13  Aligned_cols=205  Identities=21%  Similarity=0.415  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCC--
Q 024828           13 RQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHEKH--   89 (262)
Q Consensus        13 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~~~--   89 (262)
                      +++.+|++++++++||||+++++++.+..  ++||||+++++|.+++.+. ..++...+..++.|++.||+|||+ .|  
T Consensus        68 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~~  144 (287)
T 4f0f_A           68 QEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNPP  144 (287)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHT-SSSC
T ss_pred             HHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHh-CCCC
Confidence            68899999999999999999999987665  6999999999999888654 479999999999999999999998 99  


Q ss_pred             eeeCCCCCCCEEEccCCc-----EEEEecccccccccCCCCcccccccccccCccccc--CCCCCcchhHHHHHHHHHHH
Q 024828           90 IIHRDLKPSNLLINHRGE-----VKITDFGVSAIMASTSGQANTFVGTYNYMSPERIS--GGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~-----~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~Di~slG~~l~~l  162 (262)
                      ++|+||+|+||+++.++.     ++|+|||++.....   ......++..|+|||.+.  +..++.++|+||||+++|+|
T Consensus       145 ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l  221 (287)
T 4f0f_A          145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI  221 (287)
T ss_dssp             CBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHH
T ss_pred             eecCCCCcceEEEeccCCCCceeEEeCCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHH
Confidence            999999999999987776     99999999875332   333457899999999984  34578999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      ++|+.||.......     ................+..+++++.+++.+||+.||.+|||++++++
T Consensus       222 ~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          222 LTGEGPFDEYSYGK-----IKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHSSCTTTTCCCCH-----HHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HcCCCCCccccccH-----HHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            99999998655432     12223333333334444678999999999999999999999999975


No 210
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.1e-40  Score=277.05  Aligned_cols=212  Identities=19%  Similarity=0.282  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHhcCCCCeeEeeceEEEE----CCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           13 RQIAQELKINQSSQCPYVVVCYQSFYS----NGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        13 ~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ..+.+|+.+++.++||||+++++++.+    ....++||||+ |++|.+++...+.+++..+..++.|++.||+|||+ .
T Consensus        93 ~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~-~  170 (345)
T 2v62_A           93 KDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHE-N  170 (345)
T ss_dssp             HHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             hHHHHHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Confidence            356788999999999999999999988    77899999999 88999999888899999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCC--cEEEEecccccccccCCC-------CcccccccccccCcccccCCCCCcchhHHHHHHHH
Q 024828           89 HIIHRDLKPSNLLINHRG--EVKITDFGVSAIMASTSG-------QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVL  159 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~--~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l  159 (262)
                      |++|+||+|+||+++.++  .++|+|||++........       ......++..|+|||.+.+..++.++||||||+++
T Consensus       171 ~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  250 (345)
T 2v62_A          171 EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM  250 (345)
T ss_dssp             TEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             CeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence            999999999999998877  999999999976533221       11345789999999999988899999999999999


Q ss_pred             HHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCC----CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          160 LECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPP----SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       160 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |+|++|+.||.......  ................    ......+++++.+++.+||..||++|||++++++
T Consensus       251 ~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          251 LRWLCGKLPWEQNLKDP--VAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHSSCTTGGGTTCH--HHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHhCCCCcccccccc--HHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            99999999996532221  1122222222211111    0112368899999999999999999999999876


No 211
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.2e-39  Score=265.29  Aligned_cols=213  Identities=25%  Similarity=0.371  Sum_probs=175.0

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEE-EECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSF-YSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      .+....+++.+|++++++++||||+++++++ ..++..++||||+.+++|.+++.+. ..++...+..++.|++.||++|
T Consensus        65 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~l  144 (298)
T 3f66_A           65 TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL  144 (298)
T ss_dssp             CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            3556678899999999999999999999985 4566789999999999999999764 5689999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC----CCcccccccccccCcccccCCCCCcchhHHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS----GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~  160 (262)
                      |+ .|++|+||+|+||+++.++.++|+|||++.......    .......++..|+|||.+.+..++.++|+||||++++
T Consensus       145 H~-~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  223 (298)
T 3f66_A          145 AS-KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW  223 (298)
T ss_dssp             HH-TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             Hh-CCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHH
Confidence            99 999999999999999999999999999987654322    1222335677899999999888999999999999999


Q ss_pred             HHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          161 ECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       161 ~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +|++ |.+||......+       .......+... ..+..+++++.+++.+||+.||.+|||++++++
T Consensus       224 ~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          224 ELMTRGAPPYPDVNTFD-------ITVYLLQGRRL-LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHTTSCCSSTTSCTTT-------HHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCCccCCHHH-------HHHHHhcCCCC-CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999 566776554432       22233333332 233568999999999999999999999999986


No 212
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.8e-40  Score=273.60  Aligned_cols=223  Identities=22%  Similarity=0.321  Sum_probs=176.1

Q ss_pred             HHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           13 RQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK----TIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        13 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      .++.+|+++++.++||||+++++++.+.+..++||||+.+++|.+++....    .++...+..++.|++.||+|||+ .
T Consensus        72 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~  150 (326)
T 3uim_A           72 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD-H  150 (326)
T ss_dssp             CHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHH-S
T ss_pred             HHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHh-C
Confidence            368999999999999999999999999999999999999999999998653    48999999999999999999999 8


Q ss_pred             ---CeeeCCCCCCCEEEccCCcEEEEecccccccccCCC-CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           89 ---HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG-QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        89 ---~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                         |++|+||+|+||+++.++.++|+|||++........ ......|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       151 ~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  230 (326)
T 3uim_A          151 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT  230 (326)
T ss_dssp             SSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHh
Confidence               999999999999999999999999999976543322 2233458999999999988889999999999999999999


Q ss_pred             CCCCCCCCCccCc-hhhHHHHHHHHhcCCCCC---------CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          165 GQFPYSPPEQQDG-WTSFYELMEAIVDQPPPS---------APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       165 g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      |+.||........ ..................         ......++++.+++.+||+.||.+|||++++++|-.-..
T Consensus       231 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~  310 (326)
T 3uim_A          231 GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG  310 (326)
T ss_dssp             CCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred             CCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence            9999963111100 011111211111111110         011122367999999999999999999999999865443


Q ss_pred             cC
Q 024828          235 YG  236 (262)
Q Consensus       235 ~~  236 (262)
                      ..
T Consensus       311 ~~  312 (326)
T 3uim_A          311 LA  312 (326)
T ss_dssp             CS
T ss_pred             hh
Confidence            33


No 213
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=4.7e-40  Score=267.27  Aligned_cols=224  Identities=21%  Similarity=0.333  Sum_probs=177.8

Q ss_pred             ccccchhHHHHHHHHHHHHHHhcCCCCeeEeeceE-EEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHH
Q 024828            2 VIQMNVEESARRQIAQELKINQSSQCPYVVVCYQS-FYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLK   79 (262)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~   79 (262)
                      ++|+........++.+|+++++.++|++++..+.. +.++...++|||++ +++|.+++.. .+.++...+..++.|++.
T Consensus        38 avK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~  116 (296)
T 4hgt_A           38 AIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMIS  116 (296)
T ss_dssp             EEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHH
T ss_pred             EEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence            34444445556678999999999988776665554 46788899999999 8899999985 457999999999999999


Q ss_pred             HHHHHhhcCCeeeCCCCCCCEEE---ccCCcEEEEecccccccccCCC-------CcccccccccccCcccccCCCCCcc
Q 024828           80 GLLYLHHEKHIIHRDLKPSNLLI---NHRGEVKITDFGVSAIMASTSG-------QANTFVGTYNYMSPERISGGKYGYK  149 (262)
Q Consensus        80 ~l~~lh~~~~i~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~  149 (262)
                      ||.|||+ .|++|+||+|+||++   +.++.++|+|||.+........       ......++..|+|||.+.+..++.+
T Consensus       117 ~l~~LH~-~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  195 (296)
T 4hgt_A          117 RIEYIHS-KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR  195 (296)
T ss_dssp             HHHHHHH-TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHH
T ss_pred             HHHHHHH-CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCch
Confidence            9999999 999999999999999   7889999999999976544322       2234578999999999999899999


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          150 SDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       150 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +||||||+++|+|++|+.||....................... .......+++++.+++.+||+.||++|||++++++
T Consensus       196 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          196 DDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            9999999999999999999987665543333333333322221 11112467899999999999999999999999976


No 214
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=2.3e-40  Score=268.36  Aligned_cols=207  Identities=20%  Similarity=0.359  Sum_probs=171.1

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKT-IPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .....+++.+|++++++++||||+++++++.+++..++||||++|++|.+++.+.+. ++...+..++.|++.||.|||+
T Consensus        52 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~  131 (289)
T 4fvq_A           52 HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE  131 (289)
T ss_dssp             GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            345567899999999999999999999999999999999999999999999987654 9999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCc--------EEEEecccccccccCCCCcccccccccccCcccccC-CCCCcchhHHHHHH
Q 024828           87 EKHIIHRDLKPSNLLINHRGE--------VKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-GKYGYKSDIWSLGL  157 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~--------~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~  157 (262)
                       .|++|+||+|+||+++.++.        ++|+|||.+.....    .....++..|+|||.+.+ ..++.++||||||+
T Consensus       132 -~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  206 (289)
T 4fvq_A          132 -NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGT  206 (289)
T ss_dssp             -TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHH
T ss_pred             -CCeECCCcCcceEEEecCCcccccccceeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHH
Confidence             99999999999999998887        99999999865422    223457888999999987 56899999999999


Q ss_pred             HHHHHHhCC-CCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          158 VLLECATGQ-FPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       158 ~l~~l~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      ++|+|++|. +|+......       ..........   ..+...++++.+|+.+||+.||.+|||+++++++
T Consensus       207 il~el~~g~~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          207 TLWEICSGGDKPLSALDSQ-------RKLQFYEDRH---QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHHHTTTCCTTTTSCHH-------HHHHHHHTTC---CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCccccchH-------HHHHHhhccC---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999954 555443221       1112222211   1223457889999999999999999999999875


No 215
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=2.3e-40  Score=284.26  Aligned_cols=215  Identities=25%  Similarity=0.446  Sum_probs=175.4

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ...+++.+|++++++++||||+++++++.+ +..++||||+++++|.+++...  ..++...+..++.|++.||+|||+ 
T Consensus       221 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-  298 (452)
T 1fmk_A          221 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-  298 (452)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence            345689999999999999999999999876 6689999999999999999753  569999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCC-CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh-C
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT-G  165 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~-g  165 (262)
                      .|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+..++.++||||||+++|+|++ |
T Consensus       299 ~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g  378 (452)
T 1fmk_A          299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG  378 (452)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCC
Confidence            999999999999999999999999999997654321 11122345678999999988889999999999999999999 9


Q ss_pred             CCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc--Cccccc
Q 024828          166 QFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT--HPFLKM  234 (262)
Q Consensus       166 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~--h~~~~~  234 (262)
                      +.||.+....       +....+..+..... +..+++++.++|.+||+.||++|||++++++  ..++..
T Consensus       379 ~~P~~~~~~~-------~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          379 RVPYPGMVNR-------EVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             CCSSTTCCHH-------HHHHHHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             CCCCCCCCHH-------HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            9999875432       34444455544433 3578999999999999999999999999986  355543


No 216
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.7e-40  Score=276.24  Aligned_cols=213  Identities=24%  Similarity=0.363  Sum_probs=169.5

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEE-ECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFY-SNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      +....+++.+|+.++++++||||+++++++. .++..++||||+++++|.+++.+. ..++...+..++.|++.||+|||
T Consensus       130 ~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH  209 (373)
T 3c1x_A          130 DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA  209 (373)
T ss_dssp             CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            4566788999999999999999999999864 456789999999999999999865 45899999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC----CcccccccccccCcccccCCCCCcchhHHHHHHHHHH
Q 024828           86 HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG----QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  161 (262)
                      + .|++|+||+|+||+++.++.++|+|||++........    ......++..|+|||.+.+..++.++||||||+++|+
T Consensus       210 ~-~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~e  288 (373)
T 3c1x_A          210 S-KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE  288 (373)
T ss_dssp             H-TTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             H-CCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHH
Confidence            9 9999999999999999999999999999875532211    1122346678999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          162 CAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       162 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |++ |.+||......+       ....+..+.... .+..+++++.+++.+||+.||++|||+++++++
T Consensus       289 llt~~~~p~~~~~~~~-------~~~~~~~~~~~~-~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          289 LMTRGAPPYPDVNTFD-------ITVYLLQGRRLL-QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHTTSCCSCTTSCSSC-------HHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCcCCCCCCCCHHH-------HHHHHHcCCCCC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999 778887655433       222333333333 235689999999999999999999999999874


No 217
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=8.9e-40  Score=268.83  Aligned_cols=207  Identities=28%  Similarity=0.466  Sum_probs=177.8

Q ss_pred             HHHHHHHHHHhcCC--CCeeEeeceEEEECCeEEEEEeecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           13 RQIAQELKINQSSQ--CPYVVVCYQSFYSNGAISIILEYMDG-GSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        13 ~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      +++.+|+.++++++  |+||+++++++.+.+..++|+|++.+ ++|.+++...+.++...+..++.|++.||+|||+ .|
T Consensus        91 ~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~  169 (320)
T 3a99_A           91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CG  169 (320)
T ss_dssp             CEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             hHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            45678999999995  59999999999999999999999975 7999999988999999999999999999999998 99


Q ss_pred             eeeCCCCCCCEEEc-cCCcEEEEecccccccccCCCCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCC
Q 024828           90 IIHRDLKPSNLLIN-HRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECATGQF  167 (262)
Q Consensus        90 i~H~dl~p~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~~  167 (262)
                      ++|+||+|+||+++ .++.++|+|||++......  ......++..|+|||++.+..+ +.++|+||||+++|+|++|+.
T Consensus       170 ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~  247 (320)
T 3a99_A          170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI  247 (320)
T ss_dssp             EECCCCSGGGEEEETTTTEEEECCCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             cEeCCCCHHHEEEeCCCCCEEEeeCccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCC
Confidence            99999999999998 6789999999998765432  2334568999999999877665 688999999999999999999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      ||....             .......  .....+++++.+|+.+||+.||++|||++++++||||+....
T Consensus       248 pf~~~~-------------~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          248 PFEHDE-------------EIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             SCCSHH-------------HHHHCCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             CCCChh-------------hhhcccc--cccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence            996521             1111111  123568999999999999999999999999999999998764


No 218
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=8.1e-40  Score=267.58  Aligned_cols=216  Identities=30%  Similarity=0.515  Sum_probs=172.4

Q ss_pred             cccchhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHH
Q 024828            3 IQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK---TIPEEYLAAICEQVLK   79 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---~~~~~~~~~i~~~l~~   79 (262)
                      +|....+...+.+.+|++++++++||||+++++++.+  ..++||||++|++|.+++....   .++...+..++.|++.
T Consensus        36 vK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~  113 (307)
T 2eva_A           36 IKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ  113 (307)
T ss_dssp             EEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHH
T ss_pred             EEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHH
Confidence            3444455667889999999999999999999998873  4789999999999999998765   3789999999999999


Q ss_pred             HHHHHhhc--CCeeeCCCCCCCEEEccCCc-EEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHH
Q 024828           80 GLLYLHHE--KHIIHRDLKPSNLLINHRGE-VKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLG  156 (262)
Q Consensus        80 ~l~~lh~~--~~i~H~dl~p~nil~~~~~~-~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  156 (262)
                      ||+|||+.  .|++|+||+|+||+++.++. ++|+|||++......   .....++..|+|||.+.+..++.++||||||
T Consensus       114 ~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  190 (307)
T 2eva_A          114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG  190 (307)
T ss_dssp             HHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------------CCTTSSCHHHHTCCCCCTHHHHHHHH
T ss_pred             HHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---cccCCCCCceEChhhhCCCCCCcHHHHHHHH
Confidence            99999972  58999999999999988886 799999998754322   2234689999999999988899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          157 LVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       157 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      +++++|++|+.||.......     .........+..+.. ...+++.+.+++.+||+.||.+|||+++++++
T Consensus       191 ~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          191 IILWEVITRRKPFDEIGGPA-----FRIMWAVHNGTRPPL-IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             HHHHHHHHTCCTTTTTCSSH-----HHHHHHHHTTCCCCC-BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHCCCCchhhCccH-----HHHHHHHhcCCCCCc-ccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            99999999999997644321     122233333333333 35789999999999999999999999999873


No 219
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=3.2e-40  Score=270.77  Aligned_cols=214  Identities=29%  Similarity=0.457  Sum_probs=178.6

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECC-eEEEEEeecCCCCHHHHHHhcCC----------------CCHHH
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNG-AISIILEYMDGGSLADFLKKVKT----------------IPEEY   69 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~~----------------~~~~~   69 (262)
                      .....+.+.+|++++.++ +||||+++++++...+ ..++||||+++++|.+++.....                ++...
T Consensus        70 ~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (316)
T 2xir_A           70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH  149 (316)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHH
T ss_pred             CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHH
Confidence            455667899999999999 7999999999987754 58999999999999999987654                89999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCCCCC
Q 024828           70 LAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGGKYG  147 (262)
Q Consensus        70 ~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~  147 (262)
                      +..++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||++........  ......++..|+|||.+.+..++
T Consensus       150 ~~~~~~qi~~al~~lH~-~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  228 (316)
T 2xir_A          150 LICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT  228 (316)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHHh-CCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcccccc
Confidence            99999999999999999 9999999999999999999999999999876543322  12234567789999999888899


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHH
Q 024828          148 YKSDIWSLGLVLLECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQEL  226 (262)
Q Consensus       148 ~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~  226 (262)
                      .++|+||||+++|+|++ |..||......+      .....+..+.... .+..+++++.+++.+||+.||.+|||+.++
T Consensus       229 ~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~el  301 (316)
T 2xir_A          229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMR-APDYTTPEMYQTMLDCWHGEPSQRPTFSEL  301 (316)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCCSH------HHHHHHHHTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCcccchhH------HHHHHhccCccCC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            99999999999999998 999998755432      2223333333322 235688999999999999999999999999


Q ss_pred             hcC
Q 024828          227 MTH  229 (262)
Q Consensus       227 l~h  229 (262)
                      ++|
T Consensus       302 l~~  304 (316)
T 2xir_A          302 VEH  304 (316)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986


No 220
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.4e-40  Score=280.63  Aligned_cols=213  Identities=24%  Similarity=0.388  Sum_probs=165.1

Q ss_pred             HHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCCee
Q 024828           14 QIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLHHEKHII   91 (262)
Q Consensus        14 ~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh~~~~i~   91 (262)
                      .+.+|+++++++ +||||+++++++.+....|+|||++.| +|.+++.... ..+...+..++.|++.||.|||+ .|++
T Consensus        63 ~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~iv  140 (432)
T 3p23_A           63 FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS-LNIV  140 (432)
T ss_dssp             ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHH-TTCC
T ss_pred             HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHH-CcCE
Confidence            466899999999 899999999999999999999999965 9999998754 35555678999999999999999 9999


Q ss_pred             eCCCCCCCEEEcc---CC--cEEEEecccccccccCC---CCcccccccccccCcccccC---CCCCcchhHHHHHHHHH
Q 024828           92 HRDLKPSNLLINH---RG--EVKITDFGVSAIMASTS---GQANTFVGTYNYMSPERISG---GKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        92 H~dl~p~nil~~~---~~--~~~l~df~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~  160 (262)
                      |+||||+||+++.   ++  .++|+|||++.......   .......|++.|+|||++.+   ..++.++|||||||++|
T Consensus       141 HrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~  220 (432)
T 3p23_A          141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY  220 (432)
T ss_dssp             CCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHH
T ss_pred             eCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHH
Confidence            9999999999953   22  58899999987654332   22334568999999999974   45788999999999999


Q ss_pred             HHHh-CCCCCCCCCccCchhhHHHHHHHHhcCCCCC--CCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccC
Q 024828          161 ECAT-GQFPYSPPEQQDGWTSFYELMEAIVDQPPPS--APSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYG  236 (262)
Q Consensus       161 ~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~  236 (262)
                      +|++ |..||......        ............  ......+..+.+|+.+||+.||.+|||++++++||||....
T Consensus       221 ellt~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~~  291 (432)
T 3p23_A          221 YVISEGSHPFGKSLQR--------QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLE  291 (432)
T ss_dssp             HHHTTSCBTTBSTTTH--------HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCHH
T ss_pred             HHHcCCCCCcchhhHH--------HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccChH
Confidence            9999 99999653321        111121111111  11223355688999999999999999999999999997643


No 221
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.3e-39  Score=268.63  Aligned_cols=211  Identities=25%  Similarity=0.413  Sum_probs=172.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      +....+.+.+|++++++++||||+++++++.++. .++|++++.+++|.+++... +.++...+..++.|++.||.|||+
T Consensus        57 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  135 (327)
T 3lzb_A           57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED  135 (327)
T ss_dssp             SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            3445678999999999999999999999998765 78999999999999999774 569999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC--cccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ--ANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                       .|++|+||||+||+++.++.++|+|||++.........  .....++..|+|||.+.+..++.++||||||+++|+|++
T Consensus       136 -~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~  214 (327)
T 3lzb_A          136 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT  214 (327)
T ss_dssp             -TTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             -CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHH
Confidence             99999999999999999999999999999765433221  222345678999999998889999999999999999999


Q ss_pred             -CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          165 -GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       165 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                       |..||......+       ....+....... .+..++.++.+++.+||..||.+|||++++++
T Consensus       215 ~g~~p~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          215 FGSKPYDGIPASE-------ISSILEKGERLP-QPPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             TSCCTTTTCCGGG-------HHHHHHTTCCCC-CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCCCHHH-------HHHHHHcCCCCC-CCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence             999998765432       223333333333 33568999999999999999999999999987


No 222
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=6e-40  Score=291.68  Aligned_cols=210  Identities=21%  Similarity=0.381  Sum_probs=176.8

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ....+++.+|++++++++||||+++++++.+ +..++||||+.+++|.+++...+.++...+..++.|++.||+|||+ .
T Consensus       411 ~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~-~  488 (635)
T 4fl3_A          411 PALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-S  488 (635)
T ss_dssp             GGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence            3456789999999999999999999999864 4589999999999999999988889999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCCC---CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh-
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG---QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT-  164 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~-  164 (262)
                      |++|+||||+||+++.++.++|+|||++........   ......++..|+|||++.+..++.++||||||+++|+|++ 
T Consensus       489 ~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~  568 (635)
T 4fl3_A          489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY  568 (635)
T ss_dssp             TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999876543221   1222345678999999998889999999999999999998 


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |+.||......       +....+..+..... +..+++++.+||.+||+.||++|||++++++
T Consensus       569 G~~Pf~~~~~~-------~~~~~i~~~~~~~~-p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          569 GQKPYRGMKGS-------EVTAMLEKGERMGC-PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             TCCSSTTCCHH-------HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCCCCCCHH-------HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            99999875442       34444555544433 3578999999999999999999999999975


No 223
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=7e-40  Score=266.35  Aligned_cols=215  Identities=21%  Similarity=0.331  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceE-EEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQS-FYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ..+++.+|+++++.++|++++..+.. +.++...++||||+ +++|.+++.. .+.++...+..++.|++.||+|||+ .
T Consensus        47 ~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~  124 (296)
T 3uzp_A           47 KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS-K  124 (296)
T ss_dssp             SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh-C
Confidence            34568899999999988776655554 46678899999999 8899999974 4579999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEE---ccCCcEEEEecccccccccCCC-------CcccccccccccCcccccCCCCCcchhHHHHHHH
Q 024828           89 HIIHRDLKPSNLLI---NHRGEVKITDFGVSAIMASTSG-------QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLV  158 (262)
Q Consensus        89 ~i~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~  158 (262)
                      |++|+||+|+||++   +.++.++|+|||.+........       ......++..|+|||.+.+..++.++||||||++
T Consensus       125 ~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  204 (296)
T 3uzp_A          125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV  204 (296)
T ss_dssp             TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHH
Confidence            99999999999999   4788999999999876654332       1234578999999999999889999999999999


Q ss_pred             HHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          159 LLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       159 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +|+|++|+.||....................... .......+++++.+++.+||+.||.+|||++++++
T Consensus       205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            9999999999987654433333333332222211 11112467899999999999999999999999976


No 224
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.1e-40  Score=271.52  Aligned_cols=210  Identities=25%  Similarity=0.485  Sum_probs=171.3

Q ss_pred             HHHHHHHHHHHHhcC----CCCeeEeeceEEEECCeEEEEEee-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Q 024828           11 ARRQIAQELKINQSS----QCPYVVVCYQSFYSNGAISIILEY-MDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l----~h~~i~~~~~~~~~~~~~~lv~e~-~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      ....+.+|+.++.++    +||||+++++++.+.+..++|+|+ +.+++|.+++.+.+.++...+..++.|++.||+|||
T Consensus        77 ~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH  156 (312)
T 2iwi_A           77 DSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH  156 (312)
T ss_dssp             --CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344566899999888    899999999999998999999999 788999999998889999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEc-cCCcEEEEecccccccccCCCCcccccccccccCcccccCCCC-CcchhHHHHHHHHHHHH
Q 024828           86 HEKHIIHRDLKPSNLLIN-HRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKY-GYKSDIWSLGLVLLECA  163 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~  163 (262)
                      + .|++|+||+|+||+++ .++.++|+|||++......  ......++..|+|||.+.+..+ +.++|+||||+++|+|+
T Consensus       157 ~-~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~  233 (312)
T 2iwi_A          157 S-RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMV  233 (312)
T ss_dssp             H-HTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHH
T ss_pred             H-CCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHH
Confidence            9 9999999999999998 7889999999998765432  2334568899999999876665 45899999999999999


Q ss_pred             hCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCCc
Q 024828          164 TGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGDL  238 (262)
Q Consensus       164 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~  238 (262)
                      +|+.||....         ..    .....  .....+++++.+++.+||+.||++|||++++++||||+...+.
T Consensus       234 ~g~~pf~~~~---------~~----~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~  293 (312)
T 2iwi_A          234 CGDIPFERDQ---------EI----LEAEL--HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED  293 (312)
T ss_dssp             HSSCSCCSHH---------HH----HHTCC--CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC----
T ss_pred             HCCCCCCChH---------HH----hhhcc--CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhc
Confidence            9999996521         11    11111  1235688999999999999999999999999999999987653


No 225
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=7.8e-40  Score=269.74  Aligned_cols=208  Identities=21%  Similarity=0.355  Sum_probs=173.5

Q ss_pred             HHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           12 RRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      .+++.+|+.++++++||||+++++++. +...++|+||+.+++|.+++... +.++...+..++.|++.||+|||+ .|+
T Consensus        59 ~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i  136 (325)
T 3kex_A           59 FQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE-HGM  136 (325)
T ss_dssp             BCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             HHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh-CCC
Confidence            356778999999999999999999886 45689999999999999999875 578999999999999999999999 999


Q ss_pred             eeCCCCCCCEEEccCCcEEEEecccccccccCCC--CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCC
Q 024828           91 IHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG--QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT-GQF  167 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~-g~~  167 (262)
                      +|+||||+||+++.++.++|+|||++........  ......++..|+|||.+.+..++.++||||||+++|+|++ |..
T Consensus       137 vH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~  216 (325)
T 3kex_A          137 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAE  216 (325)
T ss_dssp             CCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCC
Confidence            9999999999999999999999999987643322  2233456778999999998889999999999999999999 999


Q ss_pred             CCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          168 PYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      ||......       +....+..+..... +..++.++.+++.+||..||.+|||+.+++++
T Consensus       217 p~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          217 PYAGLRLA-------EVPDLLEKGERLAQ-PQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TTTTSCTT-------HHHHHHHTTCBCCC-CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             CccccCHH-------HHHHHHHcCCCCCC-CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99875443       22333333333332 34578889999999999999999999999886


No 226
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.3e-39  Score=266.18  Aligned_cols=219  Identities=26%  Similarity=0.400  Sum_probs=178.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV---KTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      .+...+.+.+|++++++++||||+++++++.+++..++||||+++++|.+++...   .+++...+..++.|++.||.||
T Consensus        70 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l  149 (307)
T 2nru_A           70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL  149 (307)
T ss_dssp             TTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3456788999999999999999999999999999999999999999999999743   4699999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC--cccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ--ANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      |+ .|++|+||+|+||+++.++.++|+|||++.........  .....++..|+|||.+.+ .++.++|+||||+++|+|
T Consensus       150 H~-~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l  227 (307)
T 2nru_A          150 HE-NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEI  227 (307)
T ss_dssp             HH-TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHH
T ss_pred             hc-CCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHH
Confidence            99 99999999999999999999999999998765432221  223468899999999875 578999999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHH-------HHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELME-------AIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      ++|..||.................       ....... .......+..+.+++.+||+.||.+|||+++++++
T Consensus       228 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          228 ITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999987665543333322211       1111111 11122345779999999999999999999999863


No 227
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=6.8e-40  Score=274.11  Aligned_cols=210  Identities=17%  Similarity=0.265  Sum_probs=168.1

Q ss_pred             HHHHHHHHHhcCCCCeeEeeceEEEEC----CeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           14 QIAQELKINQSSQCPYVVVCYQSFYSN----GAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        14 ~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      .+..|+..++.++||||+++++++.+.    ...++||||+ |++|.+++... +.++...+..++.|++.||+|||+ .
T Consensus        94 ~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~  171 (364)
T 3op5_A           94 EQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHE-H  171 (364)
T ss_dssp             HHHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             HHHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence            344566677888999999999998764    4589999999 88999999876 679999999999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEc--cCCcEEEEecccccccccCCC-------CcccccccccccCcccccCCCCCcchhHHHHHHHH
Q 024828           89 HIIHRDLKPSNLLIN--HRGEVKITDFGVSAIMASTSG-------QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVL  159 (262)
Q Consensus        89 ~i~H~dl~p~nil~~--~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l  159 (262)
                      |++|+||||+||+++  .++.++|+|||++........       ......|++.|+|||.+.+..++.++||||||+++
T Consensus       172 ~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l  251 (364)
T 3op5_A          172 EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCM  251 (364)
T ss_dssp             TEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             CeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHH
Confidence            999999999999998  788999999999976543221       11234589999999999998899999999999999


Q ss_pred             HHHHhCCCCCCCCCccCchhhHHH-----HHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          160 LECATGQFPYSPPEQQDGWTSFYE-----LMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       160 ~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |+|++|+.||..............     ....+....   .....+++++.+++.+||..+|.+||+++++++
T Consensus       252 ~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          252 IQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKC---FPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHH---SCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHh---cccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            999999999986433321111110     001111111   112467899999999999999999999999875


No 228
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-39  Score=267.26  Aligned_cols=211  Identities=27%  Similarity=0.432  Sum_probs=162.7

Q ss_pred             HHHHHHHHh--cCCCCeeEeeceEEEEC----CeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           15 IAQELKINQ--SSQCPYVVVCYQSFYSN----GAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        15 ~~~e~~~l~--~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ..+|.+++.  .++||||+++++++.+.    ...++||||+++++|.++++. ..++...+..++.|++.||.|||+ .
T Consensus        76 ~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~-~  153 (337)
T 3mdy_A           76 WFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHT-E  153 (337)
T ss_dssp             HHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHS-C
T ss_pred             hhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHH-h
Confidence            344444444  45999999999999887    789999999999999999976 579999999999999999999998 7


Q ss_pred             --------CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC----cccccccccccCcccccCCCCCcc------h
Q 024828           89 --------HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ----ANTFVGTYNYMSPERISGGKYGYK------S  150 (262)
Q Consensus        89 --------~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~~------~  150 (262)
                              |++|+||||+||+++.++.++|+|||++.........    .....|+..|+|||++.+......      +
T Consensus       154 ~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  233 (337)
T 3mdy_A          154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA  233 (337)
T ss_dssp             BCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHH
T ss_pred             hhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCcccc
Confidence                    9999999999999999999999999998765433222    124578999999999987665554      9


Q ss_pred             hHHHHHHHHHHHHhC----------CCCCCCCCccCchhhHHHHHHHHhcCCCCCCCC-----CCCCHHHHHHHHHhhcC
Q 024828          151 DIWSLGLVLLECATG----------QFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPS-----DQFSPEFCSFISACVQK  215 (262)
Q Consensus       151 Di~slG~~l~~l~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~  215 (262)
                      ||||||+++|+|++|          +.||........  ..................+     ..+++++.+|+.+||+.
T Consensus       234 DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  311 (337)
T 3mdy_A          234 DMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP--SYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAH  311 (337)
T ss_dssp             HHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCS
T ss_pred             chHHHHHHHHHHHhccCcccccccccccHhhhcCCCC--chhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhh
Confidence            999999999999999          666655433321  1112222222222211111     24556799999999999


Q ss_pred             CcCCCCCHHHHhcC
Q 024828          216 EPQQRLSAQELMTH  229 (262)
Q Consensus       216 ~p~~Rpt~~~~l~h  229 (262)
                      ||.+|||+++++++
T Consensus       312 dP~~Rps~~ell~~  325 (337)
T 3mdy_A          312 NPASRLTALRVKKT  325 (337)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCCCHHHHHHH
Confidence            99999999999875


No 229
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.9e-39  Score=264.39  Aligned_cols=212  Identities=26%  Similarity=0.435  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHhc--CCCCeeEeeceEEEE----CCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh-
Q 024828           13 RQIAQELKINQS--SQCPYVVVCYQSFYS----NGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLH-   85 (262)
Q Consensus        13 ~~~~~e~~~l~~--l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh-   85 (262)
                      ..+.+|.+++..  ++||||+++++.+.+    ....++||||+++++|.++++. ..++...+..++.|++.||+||| 
T Consensus        45 ~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~  123 (301)
T 3q4u_A           45 KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHI  123 (301)
T ss_dssp             HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHS
T ss_pred             hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHH
Confidence            444555555555  799999999998654    2458999999999999999965 57999999999999999999999 


Q ss_pred             -------hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC----cccccccccccCcccccCC------CCCc
Q 024828           86 -------HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ----ANTFVGTYNYMSPERISGG------KYGY  148 (262)
Q Consensus        86 -------~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~------~~~~  148 (262)
                             + .|++|+||||+||+++.++.++|+|||++.........    .....|++.|+|||.+.+.      .++.
T Consensus       124 ~~~~~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (301)
T 3q4u_A          124 EIFGTQGK-PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK  202 (301)
T ss_dssp             CBCSTTCB-CEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHH
T ss_pred             hhhhccCC-CCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCc
Confidence                   7 99999999999999999999999999998765433221    2234789999999999876      4457


Q ss_pred             chhHHHHHHHHHHHHhC----------CCCCCCCCccCchhhHHHHHHHHhcC-CCCCCCC----CCCCHHHHHHHHHhh
Q 024828          149 KSDIWSLGLVLLECATG----------QFPYSPPEQQDGWTSFYELMEAIVDQ-PPPSAPS----DQFSPEFCSFISACV  213 (262)
Q Consensus       149 ~~Di~slG~~l~~l~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~l~~li~~~l  213 (262)
                      ++||||||+++|+|++|          ..||.........  ........... ..+..+.    ...++++.+|+.+||
T Consensus       203 ~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  280 (301)
T 3q4u_A          203 RVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPS--FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECW  280 (301)
T ss_dssp             HHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC--HHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcc--hhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHh
Confidence            99999999999999999          8888665443321  11222222222 2222211    124567999999999


Q ss_pred             cCCcCCCCCHHHHhc
Q 024828          214 QKEPQQRLSAQELMT  228 (262)
Q Consensus       214 ~~~p~~Rpt~~~~l~  228 (262)
                      +.||++|||++++++
T Consensus       281 ~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          281 YQNPSARLTALRIKK  295 (301)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             hcChhhCCCHHHHHH
Confidence            999999999999975


No 230
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=2.8e-39  Score=261.20  Aligned_cols=207  Identities=27%  Similarity=0.417  Sum_probs=175.2

Q ss_pred             HHHHHHHHHHhcCCCCeeEeeceEEEE----------------CCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHH
Q 024828           13 RQIAQELKINQSSQCPYVVVCYQSFYS----------------NGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAIC   74 (262)
Q Consensus        13 ~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~   74 (262)
                      ..+.+|++++++++||||+++++++..                ....++||||+++++|.+++.+.  ..++...+..++
T Consensus        49 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~  128 (284)
T 2a19_B           49 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF  128 (284)
T ss_dssp             GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHH
Confidence            357799999999999999999998864                44589999999999999999764  579999999999


Q ss_pred             HHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHH
Q 024828           75 EQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWS  154 (262)
Q Consensus        75 ~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s  154 (262)
                      .|++.||.+||+ .|++|+||+|+||+++.++.++|+|||++....... ......+++.|+|||.+.+..++.++|+||
T Consensus       129 ~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  206 (284)
T 2a19_B          129 EQITKGVDYIHS-KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYA  206 (284)
T ss_dssp             HHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHH
T ss_pred             HHHHHHHHHHHh-CCeeeccCCHHHEEEcCCCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHH
Confidence            999999999999 999999999999999999999999999987654432 233456899999999999888999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccc
Q 024828          155 LGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKM  234 (262)
Q Consensus       155 lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~  234 (262)
                      ||+++++|++|..|+..         .......+.....    ...+++++.+++.+||+.||.+|||+.+++++.+.-.
T Consensus       207 lG~il~~l~~~~~~~~~---------~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          207 LGLILAELLHVCDTAFE---------TSKFFTDLRDGII----SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             HHHHHHHHHSCCSSHHH---------HHHHHHHHHTTCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCcchh---------HHHHHHHhhcccc----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            99999999999887642         1122333333322    2467899999999999999999999999999977643


No 231
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.7e-39  Score=288.06  Aligned_cols=210  Identities=27%  Similarity=0.449  Sum_probs=175.0

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhc
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHE   87 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~   87 (262)
                      ....+++.+|++++++++||||+++++++.+ +..++||||+.+++|.+++... ..++...+..++.|++.||+|||+ 
T Consensus       377 ~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~-  454 (613)
T 2ozo_A          377 KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE-  454 (613)
T ss_dssp             STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            3467789999999999999999999999976 5699999999999999999754 459999999999999999999999 


Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC---cccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ---ANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                      .|++|+||||+||+++.++.++|+|||++.........   .....++..|+|||++.+..++.++||||||+++|+|++
T Consensus       455 ~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt  534 (613)
T 2ozo_A          455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS  534 (613)
T ss_dssp             TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999765432211   112234578999999998889999999999999999998


Q ss_pred             -CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          165 -GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       165 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                       |+.||......       +....+..+.....+ ..+++++.+||.+||+.||++|||++++++
T Consensus       535 ~G~~Pf~~~~~~-------~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          535 YGQKPYKKMKGP-------EVMAFIEQGKRMECP-PECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             TSCCTTTTCCSH-------HHHHHHHTTCCCCCC-TTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             CCCCCCCCCCHH-------HHHHHHHcCCCCCCC-CcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence             99999876543       334445555544433 568999999999999999999999999854


No 232
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.8e-39  Score=267.69  Aligned_cols=219  Identities=28%  Similarity=0.440  Sum_probs=176.7

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEEC--CeEEEEEeecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSN--GAISIILEYMDGGSLADFLKKV-KTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      +....+++.+|++++++++||||+++++++...  ...++||||+++++|.+++.+. ..++...+..++.|++.||++|
T Consensus        82 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L  161 (326)
T 2w1i_A           82 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL  161 (326)
T ss_dssp             CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            455677899999999999999999999988654  3689999999999999999876 4599999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC---CcccccccccccCcccccCCCCCcchhHHHHHHHHHH
Q 024828           85 HHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG---QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLE  161 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  161 (262)
                      |+ .|++|+||+|+||+++.++.++|+|||++........   ......++..|+|||.+.+..++.++||||||+++++
T Consensus       162 H~-~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  240 (326)
T 2w1i_A          162 GT-KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE  240 (326)
T ss_dssp             HH-TTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             Hh-CCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHH
Confidence            98 9999999999999999999999999999876543322   1223356677999999988889999999999999999


Q ss_pred             HHhCCCCCCCCCc---------cCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          162 CATGQFPYSPPEQ---------QDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       162 l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |++|..|+.....         .............+....... .+..+++++.+++.+||+.||.+|||+.++++
T Consensus       241 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          241 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP-RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC-CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCC-CCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999988864311         000011122333333333333 34578999999999999999999999999975


No 233
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=1e-39  Score=268.03  Aligned_cols=215  Identities=22%  Similarity=0.339  Sum_probs=173.1

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE----CCeEEEEEeecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYS----NGAISIILEYMDGGSLADFLKK----VKTIPEEYLAAICEQVLK   79 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~   79 (262)
                      +....+.+.+|+++++.++||||+++++++..    ....++||||+.+++|.+++..    ...++...+..++.|++.
T Consensus        66 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~  145 (317)
T 2buj_A           66 EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR  145 (317)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence            56677889999999999999999999999873    3478999999999999999976    467999999999999999


Q ss_pred             HHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC---------cccccccccccCcccccCCC---CC
Q 024828           80 GLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ---------ANTFVGTYNYMSPERISGGK---YG  147 (262)
Q Consensus        80 ~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~---~~  147 (262)
                      ||+|||+ .|++|+||+|+||+++.++.++|+|||.+.........         .....++..|+|||.+.+..   ++
T Consensus       146 ~L~~LH~-~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  224 (317)
T 2buj_A          146 GLEAIHA-KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVID  224 (317)
T ss_dssp             HHHHHHH-TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEEC
T ss_pred             HHHHHHh-CCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCC
Confidence            9999999 99999999999999999999999999987654321111         11234688999999987654   68


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHh
Q 024828          148 YKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELM  227 (262)
Q Consensus       148 ~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l  227 (262)
                      .++||||||+++|+|++|+.||........  .   ......... .......+++++.+++.+||+.||.+|||+++++
T Consensus       225 ~~~Di~slG~il~el~~g~~p~~~~~~~~~--~---~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  298 (317)
T 2buj_A          225 ERTDVWSLGCVLYAMMFGEGPYDMVFQKGD--S---VALAVQNQL-SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLL  298 (317)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTHHHHHTTS--C---HHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCChhhhhcccc--h---hhHHhhccC-CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHH
Confidence            899999999999999999999964221110  1   111122222 2222356899999999999999999999999999


Q ss_pred             cC
Q 024828          228 TH  229 (262)
Q Consensus       228 ~h  229 (262)
                      ++
T Consensus       299 ~~  300 (317)
T 2buj_A          299 SQ  300 (317)
T ss_dssp             HH
T ss_pred             HH
Confidence            86


No 234
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=9.3e-40  Score=272.13  Aligned_cols=212  Identities=17%  Similarity=0.274  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHhcCCCCeeEe---------------eceEEEE-CCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHH
Q 024828           13 RQIAQELKINQSSQCPYVVV---------------CYQSFYS-NGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAIC   74 (262)
Q Consensus        13 ~~~~~e~~~l~~l~h~~i~~---------------~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~   74 (262)
                      +.+.+|++++++++||||++               +++++.. +...++||||+ +++|.+++...  +.+++..+..++
T Consensus        87 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~  165 (352)
T 2jii_A           87 GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVA  165 (352)
T ss_dssp             STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHH
T ss_pred             chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHH
Confidence            46789999999999999887               5667766 67899999999 88999999876  789999999999


Q ss_pred             HHHHHHHHHHhhcCCeeeCCCCCCCEEEccCC--cEEEEecccccccccCCC-------CcccccccccccCcccccCCC
Q 024828           75 EQVLKGLLYLHHEKHIIHRDLKPSNLLINHRG--EVKITDFGVSAIMASTSG-------QANTFVGTYNYMSPERISGGK  145 (262)
Q Consensus        75 ~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~--~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~  145 (262)
                      .|++.||.|||+ .|++|+||+|+||+++.++  .++|+|||++........       ......+++.|+|||.+.+..
T Consensus       166 ~qi~~~L~~LH~-~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  244 (352)
T 2jii_A          166 CRLLDALEFLHE-NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCG  244 (352)
T ss_dssp             HHHHHHHHHHHH-TTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHh-CCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCC
Confidence            999999999999 9999999999999999888  899999999976543221       123347899999999999888


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCC----CCCCCHHHHHHHHHhhcCCcCCCC
Q 024828          146 YGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAP----SDQFSPEFCSFISACVQKEPQQRL  221 (262)
Q Consensus       146 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rp  221 (262)
                      ++.++||||||+++|+|++|+.||.......  ...................    ...+++++.+|+.+||+.||++||
T Consensus       245 ~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  322 (352)
T 2jii_A          245 PSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT--EDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKP  322 (352)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--HHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCC
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCcCH--HHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCC
Confidence            9999999999999999999999998654221  2223333333222221111    125789999999999999999999


Q ss_pred             CHHHHhc
Q 024828          222 SAQELMT  228 (262)
Q Consensus       222 t~~~~l~  228 (262)
                      |++++++
T Consensus       323 s~~~l~~  329 (352)
T 2jii_A          323 PYAMLRN  329 (352)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999976


No 235
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=4.3e-40  Score=290.27  Aligned_cols=228  Identities=26%  Similarity=0.439  Sum_probs=179.0

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEE------CCeEEEEEeecCCCCHHHHHHhcC---CCCHHHHHHHHHHH
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYS------NGAISIILEYMDGGSLADFLKKVK---TIPEEYLAAICEQV   77 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~sL~~~l~~~~---~~~~~~~~~i~~~l   77 (262)
                      .+....+++.+|++++++++||||+++++++.+      ++..++||||++|++|.+++....   .++...+..++.|+
T Consensus        51 ~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QL  130 (676)
T 3qa8_A           51 LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI  130 (676)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHH
Confidence            356778889999999999999999999998765      677899999999999999998754   58999999999999


Q ss_pred             HHHHHHHhhcCCeeeCCCCCCCEEEccCCc---EEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHH
Q 024828           78 LKGLLYLHHEKHIIHRDLKPSNLLINHRGE---VKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWS  154 (262)
Q Consensus        78 ~~~l~~lh~~~~i~H~dl~p~nil~~~~~~---~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s  154 (262)
                      +.||+|||+ .|++|+||+|+||+++.++.   ++|+|||.+....... ......++..|+|||.+.+..++.++|+||
T Consensus       131 l~aL~yLHs-~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwS  208 (676)
T 3qa8_A          131 SSALRYLHE-NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWS  208 (676)
T ss_dssp             HHHHHHHHH-TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHH
T ss_pred             HHHHHHHHH-CCCccCCCCHHHeEeecCCCceeEEEccccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHH
Confidence            999999999 99999999999999987764   8999999998754332 334457899999999999889999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCccCchhhHHHH--HHHH-----hcC--------CCCCCCCCCCCHHHHHHHHHhhcCCcCC
Q 024828          155 LGLVLLECATGQFPYSPPEQQDGWTSFYEL--MEAI-----VDQ--------PPPSAPSDQFSPEFCSFISACVQKEPQQ  219 (262)
Q Consensus       155 lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~-----~~~--------~~~~~~~~~~~~~l~~li~~~l~~~p~~  219 (262)
                      ||+++|+|++|..||........|......  ....     ..+        ..+......+++.+.+|+.+||.+||++
T Consensus       209 LGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~k  288 (676)
T 3qa8_A          209 FGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQ  288 (676)
T ss_dssp             HHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC-
T ss_pred             HHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhh
Confidence            999999999999999764322111000000  0000     000        0011112235688999999999999999


Q ss_pred             CCCHHHHhcCccccccC
Q 024828          220 RLSAQELMTHPFLKMYG  236 (262)
Q Consensus       220 Rpt~~~~l~h~~~~~~~  236 (262)
                      |||++++++||||+...
T Consensus       289 RPTa~elL~hp~F~~l~  305 (676)
T 3qa8_A          289 RGTDPQNPNVGCFQALD  305 (676)
T ss_dssp             --CCTTCCCCTTHHHHH
T ss_pred             CcCHHHHhcCHHHHHHH
Confidence            99999999999997654


No 236
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=5.1e-40  Score=269.94  Aligned_cols=209  Identities=22%  Similarity=0.372  Sum_probs=174.0

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ..+.+.+|+.++++++||||+++++++.+....++||||++|++|.+++...+ .++...+..++.|++.||++||+ .|
T Consensus        72 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~  150 (319)
T 2y4i_B           72 QLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA-KG  150 (319)
T ss_dssp             CCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence            34567789999999999999999999999999999999999999999998764 69999999999999999999999 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccC-----CCCcccccccccccCcccccC---------CCCCcchhHHHH
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMAST-----SGQANTFVGTYNYMSPERISG---------GKYGYKSDIWSL  155 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~---------~~~~~~~Di~sl  155 (262)
                      ++|+||+|+||+++ ++.++|+|||++......     ........++..|+|||.+.+         ..++.++|||||
T Consensus       151 i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~sl  229 (319)
T 2y4i_B          151 ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL  229 (319)
T ss_dssp             CCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHH
T ss_pred             ccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHH
Confidence            99999999999997 789999999987654321     122233458889999999874         347889999999


Q ss_pred             HHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          156 GLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       156 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      |+++|+|++|+.||......       .....+..+..+......++.++.+++.+||..||.+|||++++++
T Consensus       230 G~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          230 GTIWYELHAREWPFKTQPAE-------AIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHHHHHHHHSSCSSSSCCHH-------HHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCCHH-------HHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            99999999999999865432       3344555555555555578899999999999999999999999986


No 237
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=9.8e-40  Score=285.64  Aligned_cols=216  Identities=25%  Similarity=0.443  Sum_probs=179.4

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKV--KTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ....+++.+|++++++++||||+++++++.+ +..++||||+.+++|.+++...  ..++...+..++.|++.||+|||+
T Consensus       303 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~  381 (535)
T 2h8h_A          303 TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER  381 (535)
T ss_dssp             SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            3345689999999999999999999999876 6689999999999999999753  569999999999999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCC-CCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh-
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS-GQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT-  164 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~-  164 (262)
                       .|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+..++.++||||||+++|+|++ 
T Consensus       382 -~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~  460 (535)
T 2h8h_A          382 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK  460 (535)
T ss_dssp             -TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred             -CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhC
Confidence             999999999999999999999999999987653211 11122345678999999988889999999999999999999 


Q ss_pred             CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC--ccccc
Q 024828          165 GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH--PFLKM  234 (262)
Q Consensus       165 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h--~~~~~  234 (262)
                      |+.||......       +....+..+..... +..+++++.+||.+||+.||++|||++++++.  .++..
T Consensus       461 g~~P~~~~~~~-------~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          461 GRVPYPGMVNR-------EVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             TCCSSTTCCHH-------HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             CCCCCCCCCHH-------HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            99999875432       34444445544333 35789999999999999999999999999863  55543


No 238
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=6.1e-39  Score=265.25  Aligned_cols=210  Identities=30%  Similarity=0.433  Sum_probs=156.3

Q ss_pred             hHHHHHHHHHHHHHHhcCC-CCeeEeeceEEE--------ECCeEEEEEeecCCCCHHHHHHh---cCCCCHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQ-CPYVVVCYQSFY--------SNGAISIILEYMDGGSLADFLKK---VKTIPEEYLAAICE   75 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~--------~~~~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~i~~   75 (262)
                      +....+.+.+|+.++.++. ||||+++++++.        .....+++|||+.| +|.+++..   .++++...+..++.
T Consensus        65 ~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~  143 (337)
T 3ll6_A           65 EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTVLKIFY  143 (337)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHHHHHTTCSCCHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCC-CHHHHHHHhhccCCCCHHHHHHHHH
Confidence            4566778999999999995 999999999984        33458999999964 99998865   45799999999999


Q ss_pred             HHHHHHHHHhhcCC--eeeCCCCCCCEEEccCCcEEEEecccccccccCCCC------------cccccccccccCcccc
Q 024828           76 QVLKGLLYLHHEKH--IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ------------ANTFVGTYNYMSPERI  141 (262)
Q Consensus        76 ~l~~~l~~lh~~~~--i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~------------~~~~~~~~~y~~PE~~  141 (262)
                      |++.||.|||+ .|  ++|+||+|+||+++.++.++|+|||++.........            .....+++.|+|||.+
T Consensus       144 qi~~~l~~LH~-~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  222 (337)
T 3ll6_A          144 QTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII  222 (337)
T ss_dssp             HHHHHHHHHHT-SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC------------------------------
T ss_pred             HHHHHHHHHHh-CCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence            99999999998 89  999999999999999999999999998765432211            1134588899999998


Q ss_pred             ---cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcC
Q 024828          142 ---SGGKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQ  218 (262)
Q Consensus       142 ---~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  218 (262)
                         .+..++.++||||||+++|+|++|+.||.......           ..............+..+.+|+.+||+.||.
T Consensus       223 ~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  291 (337)
T 3ll6_A          223 DLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-----------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPE  291 (337)
T ss_dssp             -CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCCTTCCSSGGGHHHHHHHSCSSGG
T ss_pred             hccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-----------hhcCcccCCcccccchHHHHHHHHHccCChh
Confidence               45668899999999999999999999997643321           1122222333456778899999999999999


Q ss_pred             CCCCHHHHhcCc
Q 024828          219 QRLSAQELMTHP  230 (262)
Q Consensus       219 ~Rpt~~~~l~h~  230 (262)
                      +|||+++++++-
T Consensus       292 ~Rps~~e~l~~l  303 (337)
T 3ll6_A          292 ERLSIAEVVHQL  303 (337)
T ss_dssp             GSCCHHHHHHHH
T ss_pred             hCcCHHHHHHHH
Confidence            999999999874


No 239
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=5.1e-39  Score=265.88  Aligned_cols=222  Identities=22%  Similarity=0.297  Sum_probs=161.1

Q ss_pred             HHHHHHHHHhcCCCCeeEeeceEEEE-----CCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828           14 QIAQELKINQSSQCPYVVVCYQSFYS-----NGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus        14 ~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      ....|+..+..++||||+++++.+..     ...+++||||+++++|.++++.. ..+...+..++.|++.||+|||+ .
T Consensus        53 ~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~-~  130 (336)
T 3g2f_A           53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHT-E  130 (336)
T ss_dssp             HHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHC-C
T ss_pred             HHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHh-h
Confidence            33445555566899999999986543     23578999999999999999764 45889999999999999999998 8


Q ss_pred             ---------CeeeCCCCCCCEEEccCCcEEEEecccccccccCC--------CCcccccccccccCcccccC-------C
Q 024828           89 ---------HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTS--------GQANTFVGTYNYMSPERISG-------G  144 (262)
Q Consensus        89 ---------~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~-------~  144 (262)
                               |++|+||||+||+++.++.++|+|||++.......        .......|+..|+|||++.+       .
T Consensus       131 ~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  210 (336)
T 3g2f_A          131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXE  210 (336)
T ss_dssp             BCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHH
T ss_pred             hccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCccccccc
Confidence                     99999999999999999999999999997654221        12223468999999999987       3


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchh-----------hHHHHHHHHhcCCCCCCCCCC------CCHHHHH
Q 024828          145 KYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWT-----------SFYELMEAIVDQPPPSAPSDQ------FSPEFCS  207 (262)
Q Consensus       145 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~------~~~~l~~  207 (262)
                      .++.++|||||||++|+|++|..||........+.           ..................+..      .++++.+
T Consensus       211 ~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  290 (336)
T 3g2f_A          211 SALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKE  290 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHH
Confidence            45678999999999999999977665433322111           111111112222211111122      3347999


Q ss_pred             HHHHhhcCCcCCCCCHHHHh------cCccccccCC
Q 024828          208 FISACVQKEPQQRLSAQELM------THPFLKMYGD  237 (262)
Q Consensus       208 li~~~l~~~p~~Rpt~~~~l------~h~~~~~~~~  237 (262)
                      ||.+||+.||++|||++|++      .++|-++...
T Consensus       291 li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~~  326 (336)
T 3g2f_A          291 TIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSV  326 (336)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC----
T ss_pred             HHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcccC
Confidence            99999999999999999994      4566655443


No 240
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=1.4e-38  Score=263.77  Aligned_cols=214  Identities=26%  Similarity=0.374  Sum_probs=170.4

Q ss_pred             HHHHHHHHHHHhc--CCCCeeEeeceEEEECC----eEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Q 024828           12 RRQIAQELKINQS--SQCPYVVVCYQSFYSNG----AISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus        12 ~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      .+.+.+|.+++..  ++||||+++++++....    ..++||||+++++|.+++.+ .+++...+..++.|++.||+|||
T Consensus        78 ~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH  156 (342)
T 1b6c_B           78 ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLH  156 (342)
T ss_dssp             HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHH
Confidence            4567788888877  79999999999998765    79999999999999999976 57899999999999999999999


Q ss_pred             --------hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC----CcccccccccccCcccccCCC------CC
Q 024828           86 --------HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG----QANTFVGTYNYMSPERISGGK------YG  147 (262)
Q Consensus        86 --------~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~------~~  147 (262)
                              + .|++|+||+|+||+++.++.++|+|||++........    ......++..|+|||.+.+..      ++
T Consensus       157 ~~~~~~~~~-~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  235 (342)
T 1b6c_B          157 MEIVGTQGK-PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF  235 (342)
T ss_dssp             CCBCSTTCB-CEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHH
T ss_pred             HHHhhhccc-CCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccC
Confidence                    7 9999999999999999999999999999876654332    223457899999999998752      33


Q ss_pred             cchhHHHHHHHHHHHHhC----------CCCCCCCCccCchhhHHHHHHHHhcCCCCCCCC-----CCCCHHHHHHHHHh
Q 024828          148 YKSDIWSLGLVLLECATG----------QFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPS-----DQFSPEFCSFISAC  212 (262)
Q Consensus       148 ~~~Di~slG~~l~~l~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~  212 (262)
                      .++||||||+++|+|++|          ..||........  ........+.........+     ...++.+.+|+.+|
T Consensus       236 ~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  313 (342)
T 1b6c_B          236 KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP--SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC  313 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc--cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHH
Confidence            689999999999999999          778876543321  1222333333322222111     12345789999999


Q ss_pred             hcCCcCCCCCHHHHhcC
Q 024828          213 VQKEPQQRLSAQELMTH  229 (262)
Q Consensus       213 l~~~p~~Rpt~~~~l~h  229 (262)
                      |+.||++|||+++++++
T Consensus       314 l~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          314 WYANGAARLTALRIKKT  330 (342)
T ss_dssp             CCSSGGGSCCHHHHHHH
T ss_pred             hccChhhCCCHHHHHHH
Confidence            99999999999999875


No 241
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=3e-38  Score=281.72  Aligned_cols=212  Identities=25%  Similarity=0.392  Sum_probs=175.9

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh
Q 024828            7 VEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVK-TIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      ..+..++++.+|+.++++++||||+++++++. ++..++||||+++++|.+++...+ .++...+..++.|++.||+|||
T Consensus       430 ~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH  508 (656)
T 2j0j_A          430 TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE  508 (656)
T ss_dssp             TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            35667789999999999999999999999985 456899999999999999998654 6899999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCC-CcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 024828           86 HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSG-QANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECAT  164 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~  164 (262)
                      + .|++|+||+|+||+++.++.++|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       509 ~-~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  587 (656)
T 2j0j_A          509 S-KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM  587 (656)
T ss_dssp             H-TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             h-CCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHH
Confidence            9 9999999999999999999999999999876543221 1122345678999999988889999999999999999997


Q ss_pred             -CCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          165 -GQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       165 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                       |..||.+....       +....+..+..... +..+++++.+++.+||..||.+|||+.++++
T Consensus       588 ~g~~Pf~~~~~~-------~~~~~i~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          588 HGVKPFQGVKNN-------DVIGRIENGERLPM-PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             TSCCTTTTCCHH-------HHHHHHHHTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCCCCCCCHH-------HHHHHHHcCCCCCC-CccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence             99999875432       23334444443333 3578999999999999999999999999975


No 242
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1.1e-38  Score=274.83  Aligned_cols=224  Identities=21%  Similarity=0.319  Sum_probs=177.7

Q ss_pred             ccccchhHHHHHHHHHHHHHHhcCCC-CeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHH
Q 024828            2 VIQMNVEESARRQIAQELKINQSSQC-PYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-VKTIPEEYLAAICEQVLK   79 (262)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~   79 (262)
                      ++|+........++.+|+++++.++| ++++.+..++.++...++||||+ +++|.+++.. .+.+++..++.++.||+.
T Consensus        36 AvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~  114 (483)
T 3sv0_A           36 AIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMIN  114 (483)
T ss_dssp             EEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred             EEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence            33433333344568899999999976 66666667777888999999999 8899999985 467999999999999999


Q ss_pred             HHHHHhhcCCeeeCCCCCCCEEE---ccCCcEEEEecccccccccCCC-------CcccccccccccCcccccCCCCCcc
Q 024828           80 GLLYLHHEKHIIHRDLKPSNLLI---NHRGEVKITDFGVSAIMASTSG-------QANTFVGTYNYMSPERISGGKYGYK  149 (262)
Q Consensus        80 ~l~~lh~~~~i~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~  149 (262)
                      ||+|||+ .|++|+||||+|||+   +.++.++|+|||++........       ......|+..|+|||.+.+..++.+
T Consensus       115 aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~  193 (483)
T 3sv0_A          115 RVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRR  193 (483)
T ss_dssp             HHHHHHH-TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHH
T ss_pred             HHHHHHH-CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChH
Confidence            9999999 999999999999999   5788999999999976654322       1224578999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc
Q 024828          150 SDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT  228 (262)
Q Consensus       150 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~  228 (262)
                      +|||||||++|+|++|+.||...........+............ ......+++++.+|+.+||..+|.+||+++++++
T Consensus       194 sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          194 DDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI-EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH-HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH-HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            99999999999999999999886654433333333222221111 1111467899999999999999999999998765


No 243
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.5e-39  Score=273.52  Aligned_cols=215  Identities=22%  Similarity=0.405  Sum_probs=172.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECC--eEEEEEeecCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHH
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNG--AISIILEYMDGGSLADFLKKVKT---IPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~~l~~l   84 (262)
                      ...+.+.+|++++++++||||+++++++.+..  ..++||||++|++|.+++.....   ++...+..++.|++.||+||
T Consensus        49 ~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L  128 (396)
T 4eut_A           49 RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL  128 (396)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            34567789999999999999999999998754  78999999999999999976543   99999999999999999999


Q ss_pred             hhcCCeeeCCCCCCCEEE----ccCCcEEEEecccccccccCCCCcccccccccccCcccccC--------CCCCcchhH
Q 024828           85 HHEKHIIHRDLKPSNLLI----NHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG--------GKYGYKSDI  152 (262)
Q Consensus        85 h~~~~i~H~dl~p~nil~----~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Di  152 (262)
                      |+ .|++|+||||+||++    +.++.++|+|||++....... ......|+..|+|||.+.+        ..++.++||
T Consensus       129 H~-~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Di  206 (396)
T 4eut_A          129 RE-NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDL  206 (396)
T ss_dssp             HH-TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHH
T ss_pred             HH-CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHH
Confidence            99 999999999999999    667779999999997654332 2334568999999999864        457789999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCC-----------------------CCCCCCHHHHHHH
Q 024828          153 WSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSA-----------------------PSDQFSPEFCSFI  209 (262)
Q Consensus       153 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~l~~li  209 (262)
                      |||||++|+|++|+.||..........   +.+..+..+.+...                       ....+++.+.+++
T Consensus       207 wSlG~il~el~tg~~Pf~~~~~~~~~~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll  283 (396)
T 4eut_A          207 WSIGVTFYHAATGSLPFRPFEGPRRNK---EVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVL  283 (396)
T ss_dssp             HHHHHHHHHHHHSSCSEECTTCTTTCH---HHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCCcccchH---HHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHH
Confidence            999999999999999997655433222   23333333322111                       1123456788999


Q ss_pred             HHhhcCCcCCCCCHHHHhcC
Q 024828          210 SACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       210 ~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      .+||..||++|||+++++++
T Consensus       284 ~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          284 ANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             HHHSCCCTTTSCCHHHHHHH
T ss_pred             HHhhccChhhhccHHHHHHH
Confidence            99999999999999998543


No 244
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=4.2e-38  Score=256.45  Aligned_cols=199  Identities=27%  Similarity=0.450  Sum_probs=157.3

Q ss_pred             HHHHHHHHHH-hcCCCCeeEeeceEEEE----CCeEEEEEeecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHh
Q 024828           13 RQIAQELKIN-QSSQCPYVVVCYQSFYS----NGAISIILEYMDGGSLADFLKKVK--TIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus        13 ~~~~~e~~~l-~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      ..+.+|+.++ +..+||||+++++++.+    +...++||||++|++|.+++...+  .++...+..++.|++.||+|||
T Consensus        55 ~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH  134 (299)
T 3m2w_A           55 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  134 (299)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3566888887 56699999999999987    677999999999999999998764  6999999999999999999999


Q ss_pred             hcCCeeeCCCCCCCEEEcc---CCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           86 HEKHIIHRDLKPSNLLINH---RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        86 ~~~~i~H~dl~p~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      + .|++|+||+|+||+++.   ++.++|+|||++....                      +..++.++|+||||+++|+|
T Consensus       135 ~-~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~----------------------~~~~~~~~DiwslG~il~el  191 (299)
T 3m2w_A          135 S-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT----------------------GEKYDKSCDMWSLGVIMYIL  191 (299)
T ss_dssp             H-TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----------------------TCGGGGHHHHHHHHHHHHHH
T ss_pred             h-CCcccCCCCHHHEEEecCCCCCcEEEeccccccccc----------------------cccCCchhhHHHHHHHHHHH
Confidence            9 99999999999999988   7889999999875422                      23467899999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCccccccCC
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSA--PSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMYGD  237 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~  237 (262)
                      ++|+.||............   ............  ....+++++.+|+.+||+.||.+|||++++++||||+....
T Consensus       192 ~tg~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          192 LCGYPPFYSNHGLAISPGM---KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             HHSSCSCCC-------CCS---CCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred             HHCCCCCCCCcchhhhHHH---HHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence            9999999765432110000   000000000000  01457899999999999999999999999999999977653


No 245
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.5e-37  Score=259.99  Aligned_cols=212  Identities=14%  Similarity=0.178  Sum_probs=169.6

Q ss_pred             HHHHHHHHHHHHhcCC---CCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHH
Q 024828           11 ARRQIAQELKINQSSQ---CPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK-----VKTIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-----~~~~~~~~~~~i~~~l~~~l~   82 (262)
                      ...++.+|+++++.++   |+||+++++.+..++..++||||++|++|.+++..     .+.+++..+..++.|++.||+
T Consensus       107 ~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~  186 (365)
T 3e7e_A          107 NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIE  186 (365)
T ss_dssp             CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHH
Confidence            3446777788777775   99999999999999999999999999999999974     456999999999999999999


Q ss_pred             HHhhcCCeeeCCCCCCCEEEcc-----------CCcEEEEeccccccccc--CCCCcccccccccccCcccccCCCCCcc
Q 024828           83 YLHHEKHIIHRDLKPSNLLINH-----------RGEVKITDFGVSAIMAS--TSGQANTFVGTYNYMSPERISGGKYGYK  149 (262)
Q Consensus        83 ~lh~~~~i~H~dl~p~nil~~~-----------~~~~~l~df~~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~  149 (262)
                      |||+ .|++|+||||+||+++.           ++.++|+|||++.....  .........|+..|+|||++.+..++.+
T Consensus       187 ~lH~-~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  265 (365)
T 3e7e_A          187 QVHD-CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQ  265 (365)
T ss_dssp             HHHT-TTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTH
T ss_pred             HHhh-CCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCcc
Confidence            9998 99999999999999988           88999999999965432  2223344578999999999999889999


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhc-
Q 024828          150 SDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMT-  228 (262)
Q Consensus       150 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~-  228 (262)
                      +|||||||++|+|++|+.||.........          ....   ......++.+.+++.+||+.+|.+|++..+.+. 
T Consensus       266 ~DiwslG~il~elltg~~pf~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~  332 (365)
T 3e7e_A          266 IDYFGVAATVYCMLFGTYMKVKNEGGECK----------PEGL---FRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ  332 (365)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCEEEETTEEE----------ECSC---CTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred             ccHHHHHHHHHHHHhCCCccccCCCCcee----------echh---ccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence            99999999999999999999654332100          0000   111134677899999999999999975444444 


Q ss_pred             --CccccccC
Q 024828          229 --HPFLKMYG  236 (262)
Q Consensus       229 --h~~~~~~~  236 (262)
                        ..|+....
T Consensus       333 ~l~~~l~~~~  342 (365)
T 3e7e_A          333 KLKKVFQQHY  342 (365)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHhh
Confidence              34554433


No 246
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.2e-39  Score=265.71  Aligned_cols=214  Identities=25%  Similarity=0.380  Sum_probs=154.2

Q ss_pred             HHHHHHHHHHHHhc--CCCCeeEeeceEEEECC----eEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 024828           11 ARRQIAQELKINQS--SQCPYVVVCYQSFYSNG----AISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus        11 ~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      ....+.+|.+++..  ++||||+++++++.+..    ..++||||+++++|.+++++ ..++...+..++.|++.||+||
T Consensus        38 ~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~l~~l  116 (303)
T 3gxj_A           38 EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHL  116 (303)
T ss_dssp             THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHH-CCBCC-CHHHHC-CHHHHHC-C
T ss_pred             chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCCCCHHHHHhc-cCcchHHHHHHHHHHHHHHHHH
Confidence            34566778888877  79999999999998866    78999999999999999976 5688888999999999999999


Q ss_pred             h--------hcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCC----cccccccccccCcccccCC------CC
Q 024828           85 H--------HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ----ANTFVGTYNYMSPERISGG------KY  146 (262)
Q Consensus        85 h--------~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~------~~  146 (262)
                      |        + .|++|+||||+||+++.++.++|+|||++.........    .....|++.|+|||++.+.      .+
T Consensus       117 H~~~~~~~~~-~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  195 (303)
T 3gxj_A          117 HMEIVGTQGK-PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES  195 (303)
T ss_dssp             CCCBCSTTCB-C-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHH
T ss_pred             HHHHhhhccC-CCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCccccccccc
Confidence            9        8 99999999999999999999999999998765443322    2234689999999999876      34


Q ss_pred             CcchhHHHHHHHHHHHHhC----------CCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCC-----CCCHHHHHHHHH
Q 024828          147 GYKSDIWSLGLVLLECATG----------QFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSD-----QFSPEFCSFISA  211 (262)
Q Consensus       147 ~~~~Di~slG~~l~~l~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~  211 (262)
                      +.++||||||+++|+|++|          ..||.........  .................+.     ..++.+.+|+.+
T Consensus       196 ~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  273 (303)
T 3gxj_A          196 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS--VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRE  273 (303)
T ss_dssp             HHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCC--CC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHT
T ss_pred             CcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCcc--HHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHH
Confidence            4689999999999999999          6677553322110  1112222222222222111     223479999999


Q ss_pred             hhcCCcCCCCCHHHHhc
Q 024828          212 CVQKEPQQRLSAQELMT  228 (262)
Q Consensus       212 ~l~~~p~~Rpt~~~~l~  228 (262)
                      ||+.||.+|||++++++
T Consensus       274 cl~~dP~~Rps~~~i~~  290 (303)
T 3gxj_A          274 CWYANGAARLTALRIKK  290 (303)
T ss_dssp             TCCSSGGGSCCHHHHHH
T ss_pred             HhccCcccCCCHHHHHH
Confidence            99999999999999976


No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1.8e-37  Score=263.37  Aligned_cols=211  Identities=17%  Similarity=0.214  Sum_probs=163.5

Q ss_pred             HHHHHHHHHHHHHhcCCC-Cee---------------------EeeceEEEE-----CCeEEEEEeecCCCCHHHHHHh-
Q 024828           10 SARRQIAQELKINQSSQC-PYV---------------------VVCYQSFYS-----NGAISIILEYMDGGSLADFLKK-   61 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h-~~i---------------------~~~~~~~~~-----~~~~~lv~e~~~~~sL~~~l~~-   61 (262)
                      ...+.+.+|+.+++.++| ++.                     ..+...+..     ....+++|+.+ +++|.++++. 
T Consensus       120 ~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l  198 (413)
T 3dzo_A          120 NAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVL  198 (413)
T ss_dssp             -CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHh
Confidence            346778999999999976 211                     111111222     23478888887 4599999852 


Q ss_pred             ------cCCCCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccc
Q 024828           62 ------VKTIPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNY  135 (262)
Q Consensus        62 ------~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y  135 (262)
                            .+.++...+..++.|++.||+|||+ .|++|+||||+||+++.++.++|+|||++......   .....| +.|
T Consensus       199 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y  273 (413)
T 3dzo_A          199 LSHSSTHKSLVHHARLQLTLQVIRLLASLHH-YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGF  273 (413)
T ss_dssp             HHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTT
T ss_pred             hcccccCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-Cce
Confidence                  2347788999999999999999998 99999999999999999999999999998765433   334567 999


Q ss_pred             cCcccc----------cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHH
Q 024828          136 MSPERI----------SGGKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEF  205 (262)
Q Consensus       136 ~~PE~~----------~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  205 (262)
                      +|||++          .+..++.++|||||||++|+|++|+.||......+.....       ..      ....+++++
T Consensus       274 ~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~-------~~------~~~~~~~~~  340 (413)
T 3dzo_A          274 APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI-------FR------SCKNIPQPV  340 (413)
T ss_dssp             CCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGG-------GS------SCCCCCHHH
T ss_pred             eCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHH-------Hh------hcccCCHHH
Confidence            999998          5556889999999999999999999999876554332211       11      113678999


Q ss_pred             HHHHHHhhcCCcCCCCCHHHHhcCccccccCCcc
Q 024828          206 CSFISACVQKEPQQRLSAQELMTHPFLKMYGDLN  239 (262)
Q Consensus       206 ~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~~~~~  239 (262)
                      .+||.+||+.||++|||+.++++||||+...+.-
T Consensus       341 ~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~~~~  374 (413)
T 3dzo_A          341 RALLEGFLRYPKEDRLLPLQAMETPEYEQLRTEL  374 (413)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHhCHHHHHHHHHH
Confidence            9999999999999999999999999998876543


No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.3e-36  Score=273.11  Aligned_cols=204  Identities=21%  Similarity=0.319  Sum_probs=168.2

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCe-----EEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 024828            8 EESARRQIAQELKINQSSQCPYVVVCYQSFYSNGA-----ISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLL   82 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-----~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~   82 (262)
                      +......+.+|++++++++||||+++++++.+.+.     .|+||||++|++|.+++..  .++...+..++.|++.||.
T Consensus       119 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~  196 (681)
T 2pzi_A          119 DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALS  196 (681)
T ss_dssp             CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHH
Confidence            45677789999999999999999999999987655     7999999999999988765  7999999999999999999


Q ss_pred             HHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHH
Q 024828           83 YLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLEC  162 (262)
Q Consensus        83 ~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  162 (262)
                      |||+ .|++|+||||+||+++. +.++|+|||++......    ....|++.|+|||++.+. .+.++||||||+++++|
T Consensus       197 ~lH~-~giiHrDlkp~NIll~~-~~~kl~DFG~a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l  269 (681)
T 2pzi_A          197 YLHS-IGLVYNDLKPENIMLTE-EQLKLIDLGAVSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAAL  269 (681)
T ss_dssp             HHHH-TTEECCCCSGGGEEECS-SCEEECCCTTCEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHH
T ss_pred             HHHH-CCCeecccChHHeEEeC-CcEEEEecccchhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHH
Confidence            9999 99999999999999976 48999999998765432    345689999999998765 48899999999999999


Q ss_pred             HhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcCcccccc
Q 024828          163 ATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTHPFLKMY  235 (262)
Q Consensus       163 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h~~~~~~  235 (262)
                      ++|..||........               ....+....++.+.++|.+||+.||.+||+..+.+.|+|+...
T Consensus       270 ~~g~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          270 TLDLPTRNGRYVDGL---------------PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             HSCCCEETTEECSSC---------------CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HhCCCCCcccccccc---------------cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence            999888865322110               0000111235789999999999999999999999999998654


No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=2.2e-36  Score=250.26  Aligned_cols=203  Identities=21%  Similarity=0.248  Sum_probs=155.3

Q ss_pred             HHHHHHHHHHHhcCC---------CCeeEeece-----------------EEEE-------------CCeEEEEEeecCC
Q 024828           12 RRQIAQELKINQSSQ---------CPYVVVCYQ-----------------SFYS-------------NGAISIILEYMDG   52 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~---------h~~i~~~~~-----------------~~~~-------------~~~~~lv~e~~~~   52 (262)
                      .+.+.+|+++++.++         ||||+++.+                 ++.+             .+..|+||||+.+
T Consensus        67 ~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~  146 (336)
T 2vuw_A           67 FEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFG  146 (336)
T ss_dssp             HHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCC
Confidence            367778888887775         555555554                 4443             6789999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh-hcCCeeeCCCCCCCEEEccCC--------------------cEEEE
Q 024828           53 GSLADFLKKVKTIPEEYLAAICEQVLKGLLYLH-HEKHIIHRDLKPSNLLINHRG--------------------EVKIT  111 (262)
Q Consensus        53 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh-~~~~i~H~dl~p~nil~~~~~--------------------~~~l~  111 (262)
                      +++.+.+.+ +.+++..+..++.|++.||+||| + .|++|+||||+||+++.++                    .++|+
T Consensus       147 g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~-~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~  224 (336)
T 2vuw_A          147 GIDLEQMRT-KLSSLATAKSILHQLTASLAVAEAS-LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSII  224 (336)
T ss_dssp             CEETGGGTT-TCCCHHHHHHHHHHHHHHHHHHHHH-HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEEC
T ss_pred             CccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHh-CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEe
Confidence            876666644 67899999999999999999999 8 9999999999999999887                    89999


Q ss_pred             ecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHH-HHHHHhCCCCCCCCCccCchhhHHHHHHHHhc
Q 024828          112 DFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLV-LLECATGQFPYSPPEQQDGWTSFYELMEAIVD  190 (262)
Q Consensus       112 df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~-l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  190 (262)
                      |||++......     ...|++.|+|||++.+.. +.++||||++++ .+++++|..||....    |  .......+..
T Consensus       225 DFG~a~~~~~~-----~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~----~--~~~~~~~~~~  292 (336)
T 2vuw_A          225 DYTLSRLERDG-----IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL----W--LHYLTDKMLK  292 (336)
T ss_dssp             CCTTCBEEETT-----EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH----H--HHHHHHHHHH
T ss_pred             eccccEecCCC-----cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh----h--hhHHHHhhhh
Confidence            99999865432     347899999999999766 899999998777 777888988884310    0  0112222221


Q ss_pred             CC-CCCCC----CCCCCHHHHHHHHHhhcCCcCCCCCHHHHh-cCcccc
Q 024828          191 QP-PPSAP----SDQFSPEFCSFISACVQKEPQQRLSAQELM-THPFLK  233 (262)
Q Consensus       191 ~~-~~~~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l-~h~~~~  233 (262)
                      .. .....    ...+++++.+||++||+.|     |++|+| +||||+
T Consensus       293 ~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          293 QMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             TCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             hhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            11 11111    1246788999999999976     999999 999995


No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=7.8e-35  Score=235.62  Aligned_cols=186  Identities=14%  Similarity=0.137  Sum_probs=151.7

Q ss_pred             HHHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 024828            9 ESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEK   88 (262)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~   88 (262)
                      +...+.+.+|+.++.+++||||+++++++.+++..|+||||++|++|.+++++ + .....+..++.|++.||+|||+ .
T Consensus        72 ~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~-~  148 (286)
T 3uqc_A           72 DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHR-A  148 (286)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHH-C
Confidence            56778899999999999999999999999999999999999999999999965 3 4566788999999999999999 9


Q ss_pred             CeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 024828           89 HIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFP  168 (262)
Q Consensus        89 ~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  168 (262)
                      |++|+||||+||+++.+|.++|++++.                    ++       .++.++||||||+++|+|++|+.|
T Consensus       149 givH~Dikp~NIll~~~g~~kl~~~~~--------------------~~-------~~~~~~Di~slG~il~elltg~~P  201 (286)
T 3uqc_A          149 GVALSIDHPSRVRVSIDGDVVLAYPAT--------------------MP-------DANPQDDIRGIGASLYALLVNRWP  201 (286)
T ss_dssp             TCCCCCCSGGGEEEETTSCEEECSCCC--------------------CT-------TCCHHHHHHHHHHHHHHHHHSEEC
T ss_pred             CCccCCCCcccEEEcCCCCEEEEeccc--------------------cC-------CCCchhHHHHHHHHHHHHHHCCCC
Confidence            999999999999999999999985432                    22       368899999999999999999999


Q ss_pred             CCCCCccCchhhHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          169 YSPPEQQDGWTSFYELMEAIVDQPPP--SAPSDQFSPEFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      |......+......    .......+  ......+++++.+++.+||+.||.+| |+.++++.
T Consensus       202 f~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          202 LPEAGVRSGLAPAE----RDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             SCCCSBCCCSEECC----BCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             CCcCCcchhhHHHH----HHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence            98765533110000    00001000  01124688999999999999999999 99999873


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.98  E-value=1.8e-33  Score=246.94  Aligned_cols=154  Identities=16%  Similarity=0.208  Sum_probs=121.8

Q ss_pred             hHHHHHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828            8 EESARRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ++..++++.+|+++|+++ +|+||+++++++++++..||||||++|++|.+++.+.++++..   .|+.||+.||+|+|+
T Consensus       281 ~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~  357 (569)
T 4azs_A          281 SQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEK  357 (569)
T ss_dssp             HHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHH
Confidence            456677899999999999 7999999999999999999999999999999999998888865   478999999999999


Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQ  166 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~  166 (262)
                       .||+||||||+|||++.+|.+||+|||++.............+||+.|++||++.+ ....++|+|++|++++.+.++.
T Consensus       358 -~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          358 -QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             -TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred             -CCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence             99999999999999999999999999999876655555566789999999999986 4577899999999888776543


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89  E-value=7e-25  Score=191.44  Aligned_cols=149  Identities=19%  Similarity=0.238  Sum_probs=125.5

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ..++++.+|++++++++||||+++..++.+....|+||||++|++|.+++.+        +..++.|++.+|.|||+ .|
T Consensus       381 ~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~-~g  451 (540)
T 3en9_A          381 IRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHK-ND  451 (540)
T ss_dssp             HHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHH-TT
T ss_pred             HHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHH-Cc
Confidence            3467789999999999999999777776677788999999999999999876        67899999999999998 99


Q ss_pred             eeeCCCCCCCEEEccCCcEEEEecccccccccCCCC-------cccccccccccCcccccC--CCCCcchhHHHHHHHHH
Q 024828           90 IIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQ-------ANTFVGTYNYMSPERISG--GKYGYKSDIWSLGLVLL  160 (262)
Q Consensus        90 i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~  160 (262)
                      ++|+||||+||+++.  .++|+|||++.........       .....|++.|+|||++.+  ..|+...|+|+..+-..
T Consensus       452 IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l  529 (540)
T 3en9_A          452 VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELM  529 (540)
T ss_dssp             EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHH
T ss_pred             CccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            999999999999987  9999999999876432211       134578999999999986  45777889999888777


Q ss_pred             HHHhCCCCC
Q 024828          161 ECATGQFPY  169 (262)
Q Consensus       161 ~l~~g~~p~  169 (262)
                      +-+.++-+|
T Consensus       530 ~~v~~r~rY  538 (540)
T 3en9_A          530 KDVERRARY  538 (540)
T ss_dssp             HHHHTCSCC
T ss_pred             HHHHhcccc
Confidence            777666554


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.74  E-value=7.4e-19  Score=141.39  Aligned_cols=106  Identities=21%  Similarity=0.245  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Q 024828           11 ARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHI   90 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i   90 (262)
                      .+..+.+|+.++++++  | +++.+++.. +..|+||||++|++|.+ +..      .....++.|++.||.+||+ .|+
T Consensus       147 ~~~~~~~E~~~l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~-~gi  214 (282)
T 1zar_A          147 AIRSARNEFRALQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYH-RGI  214 (282)
T ss_dssp             HHHHHHHHHHHHHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHH-TTE
T ss_pred             HHHHHHHHHHHHHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHH-CCC
Confidence            5678999999999999  4 666666554 44699999999999988 421      2355799999999999998 999


Q ss_pred             eeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccccccccCccccc
Q 024828           91 IHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERIS  142 (262)
Q Consensus        91 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  142 (262)
                      +|+||||+||+++ ++.++|+|||++..             ...+.|||.+.
T Consensus       215 iHrDlkp~NILl~-~~~vkl~DFG~a~~-------------~~~~~a~e~l~  252 (282)
T 1zar_A          215 VHGDLSQYNVLVS-EEGIWIIDFPQSVE-------------VGEEGWREILE  252 (282)
T ss_dssp             ECSCCSTTSEEEE-TTEEEECCCTTCEE-------------TTSTTHHHHHH
T ss_pred             EeCCCCHHHEEEE-CCcEEEEECCCCeE-------------CCCCCHHHHHH
Confidence            9999999999999 99999999998853             23456777664


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.54  E-value=4.9e-15  Score=117.59  Aligned_cols=97  Identities=16%  Similarity=0.236  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHhcCCCCee--EeeceEEEECCeEEEEEeecCC-----CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 024828           12 RRQIAQELKINQSSQCPYV--VVCYQSFYSNGAISIILEYMDG-----GSLADFLKKVKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~~-----~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      ...+.+|++++.++.|+++  +.++..    ...++||||+.+     .+|.++...   .+...+..++.|++.+|.+|
T Consensus       114 ~~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~l  186 (258)
T 1zth_A          114 FIWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRL  186 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHH
Confidence            4578899999999987764  333322    346899999942     278776543   23456788999999999999


Q ss_pred             h-hcCCeeeCCCCCCCEEEccCCcEEEEecccccc
Q 024828           85 H-HEKHIIHRDLKPSNLLINHRGEVKITDFGVSAI  118 (262)
Q Consensus        85 h-~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~  118 (262)
                      | + .|++|+||||+||+++.  .++|+|||++..
T Consensus       187 H~~-~givHrDlkp~NILl~~--~~~liDFG~a~~  218 (258)
T 1zth_A          187 YQE-AELVHADLSEYNIMYID--KVYFIDMGQAVT  218 (258)
T ss_dssp             HHT-SCEECSSCSTTSEEESS--SEEECCCTTCEE
T ss_pred             HHH-CCEEeCCCCHHHEEEcC--cEEEEECccccc
Confidence            9 8 99999999999999987  899999999864


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.24  E-value=4.2e-12  Score=105.28  Aligned_cols=95  Identities=16%  Similarity=0.167  Sum_probs=69.9

Q ss_pred             HHHHHHHHhcCCCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeeCC
Q 024828           15 IAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHIIHRD   94 (262)
Q Consensus        15 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~d   94 (262)
                      +.+|...|.++.+.++.... .+.... .++||||++|.+|..+..    .  .....++.|++.+|.+||+ .|++|+|
T Consensus       160 A~kE~~nL~rL~~~gv~vp~-p~~~~~-~~LVME~i~G~~L~~l~~----~--~~~~~l~~qll~~l~~lH~-~gIVHrD  230 (397)
T 4gyi_A          160 AIKEFAFMKALYEEGFPVPE-PIAQSR-HTIVMSLVDALPMRQVSS----V--PDPASLYADLIALILRLAK-HGLIHGD  230 (397)
T ss_dssp             HHHHHHHHHHHHHTTCSCCC-EEEEET-TEEEEECCSCEEGGGCCC----C--SCHHHHHHHHHHHHHHHHH-TTEECSC
T ss_pred             HHHHHHHHHHHHhcCCCCCe-eeeccC-ceEEEEecCCccHhhhcc----c--HHHHHHHHHHHHHHHHHHH-CCCcCCC
Confidence            45677778777555543222 222222 379999999988865422    2  2345788999999999998 9999999


Q ss_pred             CCCCCEEEccCC----------cEEEEecccccc
Q 024828           95 LKPSNLLINHRG----------EVKITDFGVSAI  118 (262)
Q Consensus        95 l~p~nil~~~~~----------~~~l~df~~~~~  118 (262)
                      |||.|||++.++          .+.++||+.+..
T Consensus       231 LKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          231 FNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             CSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            999999998776          389999997654


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.00  E-value=7.6e-10  Score=87.65  Aligned_cols=101  Identities=17%  Similarity=0.117  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHhcC-CCCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc---
Q 024828           12 RRQIAQELKINQSS-QCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHE---   87 (262)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~---   87 (262)
                      ...+.+|+.+++.+ ++..++++++++.+.+..|+|||+++|.+|.+.+.     +......++.++..+|+.||+-   
T Consensus        53 ~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~  127 (263)
T 3tm0_A           53 TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDIS  127 (263)
T ss_dssp             TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCT
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcc
Confidence            34688999999888 46778899999999999999999999999987531     1223457788889999999970   


Q ss_pred             -------------------------------------------------------CCeeeCCCCCCCEEEccCCcEEEEe
Q 024828           88 -------------------------------------------------------KHIIHRDLKPSNLLINHRGEVKITD  112 (262)
Q Consensus        88 -------------------------------------------------------~~i~H~dl~p~nil~~~~~~~~l~d  112 (262)
                                                                             .+++|+|++|.||+++.++.+.++|
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lID  207 (263)
T 3tm0_A          128 DCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFID  207 (263)
T ss_dssp             TCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECC
T ss_pred             cCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEE
Confidence                                                                   3489999999999997655567999


Q ss_pred             ccccc
Q 024828          113 FGVSA  117 (262)
Q Consensus       113 f~~~~  117 (262)
                      |+.+.
T Consensus       208 we~a~  212 (263)
T 3tm0_A          208 LGRSG  212 (263)
T ss_dssp             CTTCE
T ss_pred             chhcc
Confidence            98653


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.91  E-value=2.2e-10  Score=90.51  Aligned_cols=96  Identities=14%  Similarity=0.109  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHhcCCCCe--eEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-
Q 024828           13 RQIAQELKINQSSQCPY--VVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH-   89 (262)
Q Consensus        13 ~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~-   89 (262)
                      ..+.+|+.+++.+.+.+  +++++....+++..++||||++|.+|.  ..   ..+   ...++.+++..|..||+ .. 
T Consensus        58 ~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~---~~~---~~~~~~~l~~~l~~lh~-~~~  128 (264)
T 1nd4_A           58 NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SS---HLA---PAEKVSIMADAMRRLHT-LDP  128 (264)
T ss_dssp             SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TS---CCC---HHHHHHHHHHHHHHHTT-SCG
T ss_pred             hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cC---cCC---HhHHHHHHHHHHHHHhC-CCC
Confidence            45778898888885433  567888888888899999999998884  11   122   23566777777777776 32 


Q ss_pred             ---------------------------------------------------------eeeCCCCCCCEEEccCCcEEEEe
Q 024828           90 ---------------------------------------------------------IIHRDLKPSNLLINHRGEVKITD  112 (262)
Q Consensus        90 ---------------------------------------------------------i~H~dl~p~nil~~~~~~~~l~d  112 (262)
                                                                               ++|+|++|.||+++.++.+.++|
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD  208 (264)
T 1nd4_A          129 ATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFID  208 (264)
T ss_dssp             GGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECC
T ss_pred             CCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEc
Confidence                                                                     99999999999997665566999


Q ss_pred             ccccc
Q 024828          113 FGVSA  117 (262)
Q Consensus       113 f~~~~  117 (262)
                      |+.+.
T Consensus       209 ~~~a~  213 (264)
T 1nd4_A          209 CGRLG  213 (264)
T ss_dssp             CTTCE
T ss_pred             chhcc
Confidence            99764


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.90  E-value=1.3e-09  Score=90.34  Aligned_cols=106  Identities=19%  Similarity=0.296  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHHhcCC--CCeeEeeceEEEEC---CeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Q 024828           11 ARRQIAQELKINQSSQ--CPYVVVCYQSFYSN---GAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLH   85 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~---~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh   85 (262)
                      ...++.+|+.+++.+.  +..+++++..+.+.   +..++|||+++|..+.+.  ....++......++.+++.+|+.||
T Consensus        79 ~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH  156 (359)
T 3dxp_A           79 SAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQ--SLPGMSPAERTAIYDEMNRVIAAMH  156 (359)
T ss_dssp             ---CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCT--TCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCC--ccccCCHHHHHHHHHHHHHHHHHHh
Confidence            3467889999999886  45578888887765   458999999999777431  1134678888899999999999999


Q ss_pred             h---------------------------------------------------------cCCeeeCCCCCCCEEEccCCc-
Q 024828           86 H---------------------------------------------------------EKHIIHRDLKPSNLLINHRGE-  107 (262)
Q Consensus        86 ~---------------------------------------------------------~~~i~H~dl~p~nil~~~~~~-  107 (262)
                      +                                                         ..+++|+|+++.||+++.++. 
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~  236 (359)
T 3dxp_A          157 TVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPR  236 (359)
T ss_dssp             HSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSC
T ss_pred             CCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCc
Confidence            6                                                         146999999999999987753 


Q ss_pred             -EEEEecccccc
Q 024828          108 -VKITDFGVSAI  118 (262)
Q Consensus       108 -~~l~df~~~~~  118 (262)
                       +.++||+.+..
T Consensus       237 v~~viDwe~a~~  248 (359)
T 3dxp_A          237 VLAVLDWELSTL  248 (359)
T ss_dssp             EEEECCCTTCEE
T ss_pred             EEEEECcccccc
Confidence             68999998754


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77  E-value=3e-09  Score=86.13  Aligned_cols=164  Identities=16%  Similarity=0.197  Sum_probs=101.6

Q ss_pred             cccchhHHHHHHHHHHHHHHhcC-CCCe--eEeeceEEEECC---eEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHH
Q 024828            3 IQMNVEESARRQIAQELKINQSS-QCPY--VVVCYQSFYSNG---AISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQ   76 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l-~h~~--i~~~~~~~~~~~---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~   76 (262)
                      .|+.........+.+|..+++.+ .+..  +++++.....+.   ..|+||++++|.+|.+...  ..++.+....++.+
T Consensus        45 lR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~--~~l~~~~~~~~~~~  122 (304)
T 3sg8_A           45 FKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLL--NNLPKQSQNQAAKD  122 (304)
T ss_dssp             EEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHH--HTSCHHHHHHHHHH
T ss_pred             EEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCcccc--ccCCHHHHHHHHHH
Confidence            34444445677899999999877 3333  344444433332   3578999999988865332  24677777788888


Q ss_pred             HHHHHHHHhh---------------------------------------------------------cCCeeeCCCCCCC
Q 024828           77 VLKGLLYLHH---------------------------------------------------------EKHIIHRDLKPSN   99 (262)
Q Consensus        77 l~~~l~~lh~---------------------------------------------------------~~~i~H~dl~p~n   99 (262)
                      ++..++.||+                                                         ...++|+|++|.|
T Consensus       123 l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N  202 (304)
T 3sg8_A          123 LARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDH  202 (304)
T ss_dssp             HHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGG
T ss_pred             HHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCccc
Confidence            8888888874                                                         0247999999999


Q ss_pred             EEEcc--CCcEEEEecccccccccCCCCcccccccccccCcccccC-----CC---------CCcchhHHHHHHHHHHHH
Q 024828          100 LLINH--RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISG-----GK---------YGYKSDIWSLGLVLLECA  163 (262)
Q Consensus       100 il~~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-----~~---------~~~~~Di~slG~~l~~l~  163 (262)
                      |+++.  .+.+.++||+.+.............. ...-..|+....     +.         .....+.|+++.+++.+.
T Consensus       203 ~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~  281 (304)
T 3sg8_A          203 ILFDTEKNTICGIIDFGDAAISDPDNDFISLME-DDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKE  281 (304)
T ss_dssp             EEEETTTTEEEEECCCTTCEEECTTHHHHTTCC-TTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCEEEEEeCCCCccCChHHHHHHHHh-hccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99987  45578999998754311100000000 000012221110     00         112368899999999999


Q ss_pred             hCCCCC
Q 024828          164 TGQFPY  169 (262)
Q Consensus       164 ~g~~p~  169 (262)
                      +|+.+|
T Consensus       282 ~g~~~~  287 (304)
T 3sg8_A          282 YGYMDW  287 (304)
T ss_dssp             TTCHHH
T ss_pred             cCCHHH
Confidence            997655


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.54  E-value=1.3e-07  Score=77.14  Aligned_cols=110  Identities=16%  Similarity=0.225  Sum_probs=77.2

Q ss_pred             cccchhHHHHHHHHHHHHHHhcCCC----CeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHH
Q 024828            3 IQMNVEESARRQIAQELKINQSSQC----PYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVL   78 (262)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~h----~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~   78 (262)
                      .|+.........+.+|..+++.+.+    ..+++++..    +..++||||++|.++....  ...++......++.+++
T Consensus        62 lR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~l~~~~--~~~l~~~~~~~~~~~l~  135 (320)
T 3r70_A           62 VKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGERITYEQ--YHKLSEKEKDALAYDEA  135 (320)
T ss_dssp             EEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBCCCHHH--HTTSCHHHHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCccccccc--cccCCHHHHHHHHHHHH
Confidence            3444444445678999988888755    223455444    4568999999998886432  13456666777777777


Q ss_pred             HHHHHHhh--------------------------------------------------------------cCCeeeCCCC
Q 024828           79 KGLLYLHH--------------------------------------------------------------EKHIIHRDLK   96 (262)
Q Consensus        79 ~~l~~lh~--------------------------------------------------------------~~~i~H~dl~   96 (262)
                      ..++.||+                                                              ...++|+|++
T Consensus       136 ~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~  215 (320)
T 3r70_A          136 TFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFS  215 (320)
T ss_dssp             HHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCS
T ss_pred             HHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCC
Confidence            77777774                                                              0124999999


Q ss_pred             CCCEEEccCCcEEEEecccccc
Q 024828           97 PSNLLINHRGEVKITDFGVSAI  118 (262)
Q Consensus        97 p~nil~~~~~~~~l~df~~~~~  118 (262)
                      |.||+++.++.+.++||+.+..
T Consensus       216 ~~N~l~~~~~~~~~iD~~~~~~  237 (320)
T 3r70_A          216 ANNMIFRNNRLFGVIDFGDFNV  237 (320)
T ss_dssp             GGGEEEETTEEEEECCCTTCEE
T ss_pred             CCcEEEECCceEEEECCccccc
Confidence            9999998765579999998754


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.44  E-value=7.6e-07  Score=72.04  Aligned_cols=113  Identities=19%  Similarity=0.203  Sum_probs=74.8

Q ss_pred             ccchhHHHHHHHHHHHHHHhcCCCC---eeEeeceEEE-ECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHH
Q 024828            4 QMNVEESARRQIAQELKINQSSQCP---YVVVCYQSFY-SNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLK   79 (262)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~   79 (262)
                      |+.........+.+|.++|+.+.+.   .+++++.+.. ..+..++||++++|.++.+..-  ..++......++.++..
T Consensus        45 R~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~  122 (306)
T 3tdw_A           45 RFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGM--AVLPDDAKDRLALQLAE  122 (306)
T ss_dssp             EEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHHH--TTSCHHHHHHHHHHHHH
T ss_pred             EecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhhh--hhCCHHHHHHHHHHHHH
Confidence            3334445677899999999998542   3566666664 3456789999999988876321  12344444444444444


Q ss_pred             HHHHHhh-----------------------------------------------------------cCCeeeCCCCCCCE
Q 024828           80 GLLYLHH-----------------------------------------------------------EKHIIHRDLKPSNL  100 (262)
Q Consensus        80 ~l~~lh~-----------------------------------------------------------~~~i~H~dl~p~ni  100 (262)
                      .|+.||+                                                           ...++|+|+++.||
T Consensus       123 ~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~  202 (306)
T 3tdw_A          123 FMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHF  202 (306)
T ss_dssp             HHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGE
T ss_pred             HHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccE
Confidence            4444443                                                           13469999999999


Q ss_pred             EEcc---CCc-EEEEecccccc
Q 024828          101 LINH---RGE-VKITDFGVSAI  118 (262)
Q Consensus       101 l~~~---~~~-~~l~df~~~~~  118 (262)
                      +++.   ++. +.++||+.+..
T Consensus       203 l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          203 LTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EECTTCSSCCEEEECCCTTCEE
T ss_pred             EEecCCCCCceEEEEehhhcCC
Confidence            9987   355 47999997654


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.44  E-value=1.4e-06  Score=69.09  Aligned_cols=103  Identities=13%  Similarity=0.116  Sum_probs=74.8

Q ss_pred             HHHHHHHHHHHHhcCC-CCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh---
Q 024828           11 ARRQIAQELKINQSSQ-CPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHH---   86 (262)
Q Consensus        11 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~---   86 (262)
                      ....+.+|...|+.+. +--+++++.++.+++..++|||+++|.++.+.....    ......+..++...|..||.   
T Consensus        62 ~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~  137 (272)
T 4gkh_A           62 VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPV  137 (272)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCG
T ss_pred             CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCc
Confidence            4567888999988773 444778889999999999999999998887765431    12223444555555555553   


Q ss_pred             ------------------------------------------------------cCCeeeCCCCCCCEEEccCCcEEEEe
Q 024828           87 ------------------------------------------------------EKHIIHRDLKPSNLLINHRGEVKITD  112 (262)
Q Consensus        87 ------------------------------------------------------~~~i~H~dl~p~nil~~~~~~~~l~d  112 (262)
                                                                            ...++|+|+++.||+++.++.+-++|
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viD  217 (272)
T 4gkh_A          138 CNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCID  217 (272)
T ss_dssp             GGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECC
T ss_pred             ccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEE
Confidence                                                                  01268999999999998766677999


Q ss_pred             ccccc
Q 024828          113 FGVSA  117 (262)
Q Consensus       113 f~~~~  117 (262)
                      |+.+.
T Consensus       218 we~a~  222 (272)
T 4gkh_A          218 VGRVG  222 (272)
T ss_dssp             CTTCE
T ss_pred             Ccccc
Confidence            98764


No 263
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=98.20  E-value=3.9e-05  Score=57.95  Aligned_cols=136  Identities=18%  Similarity=0.184  Sum_probs=91.0

Q ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccccCCCCcccccc
Q 024828           53 GSLADFLKKV-KTIPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVG  131 (262)
Q Consensus        53 ~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~  131 (262)
                      -||.++++.. .++++++++.++.|.+.+|..+-..+.-...=+.|..|++..+|.|.+.+ +.+.            ..
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------~~   99 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------AG   99 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-----------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc------------cc
Confidence            4899999866 58999999999999999987763212222333557889999999887774 1110            11


Q ss_pred             cccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCccCchhhHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 024828          132 TYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYSPPEQQDGWTSFYELMEAIVDQPPPSAPSDQFSPEFCSFISA  211 (262)
Q Consensus       132 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  211 (262)
                      ...+.|||... ...+.+.-||+||+++|.-+--    .-..                      .....+++++-+||..
T Consensus       100 ~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy----gL~e----------------------~eE~eLS~~LE~LL~~  152 (229)
T 2yle_A          100 EPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY----GLKE----------------------NEERELSPPLEQLIDH  152 (229)
T ss_dssp             -------CCSS-SSSCHHHHHHHHHHHHHHHHTT----TCCT----------------------TEEECCCHHHHHHHHH
T ss_pred             ccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc----CCCc----------------------ccchhhCHHHHHHHHH
Confidence            33566887764 3456889999999999998752    2111                      1124788999999999


Q ss_pred             hhcC-------------------------CcCCCCCHHHHhc
Q 024828          212 CVQK-------------------------EPQQRLSAQELMT  228 (262)
Q Consensus       212 ~l~~-------------------------~p~~Rpt~~~~l~  228 (262)
                      |..-                         .+..|++++++++
T Consensus       153 Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~  194 (229)
T 2yle_A          153 MANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMK  194 (229)
T ss_dssp             HTTCCC--------------------CCSCCCCCCSHHHHHH
T ss_pred             HHhcccccccccccccccccccccccccccccCcCCHHHHHH
Confidence            9765                         3467888988875


No 264
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.88  E-value=1.2e-05  Score=66.48  Aligned_cols=31  Identities=19%  Similarity=0.484  Sum_probs=26.2

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccc
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAI  118 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~  118 (262)
                      ..++|+|+++.||+++.++.+.++||+.+..
T Consensus       213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~  243 (362)
T 3ovc_A          213 RHLVHADFGSNNVLTDNGRITAVIDWSEAMF  243 (362)
T ss_dssp             CEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred             cEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence            3579999999999997666778999998754


No 265
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.78  E-value=1.4e-05  Score=65.94  Aligned_cols=31  Identities=19%  Similarity=0.313  Sum_probs=25.6

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccc
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAI  118 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~  118 (262)
                      ..++|+|+++.||++++++.+.++||+.+..
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            5799999999999998544578999987653


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.56  E-value=0.00046  Score=56.20  Aligned_cols=31  Identities=16%  Similarity=0.371  Sum_probs=27.4

Q ss_pred             cCCeeeCCCCCCCEEEccCCcEEEEeccccc
Q 024828           87 EKHIIHRDLKPSNLLINHRGEVKITDFGVSA  117 (262)
Q Consensus        87 ~~~i~H~dl~p~nil~~~~~~~~l~df~~~~  117 (262)
                      ..+++|+|+++.||+++.++.+.++||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            3789999999999999878889999998653


No 267
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.27  E-value=0.00014  Score=58.36  Aligned_cols=30  Identities=23%  Similarity=0.228  Sum_probs=25.0

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccc
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAI  118 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~  118 (262)
                      ..++|+|+.+.||+ ..++.+.++||..+..
T Consensus       173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            34899999999999 5677889999987653


No 268
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=96.89  E-value=0.0012  Score=55.05  Aligned_cols=29  Identities=24%  Similarity=0.433  Sum_probs=24.8

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEeccccc
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSA  117 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~  117 (262)
                      ..++|||+++.||+++.+ .+.++||..+.
T Consensus       227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~  255 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAF  255 (397)
T ss_dssp             CEEECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CceeeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence            679999999999999765 48999997664


No 269
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.88  E-value=0.0022  Score=52.08  Aligned_cols=31  Identities=29%  Similarity=0.458  Sum_probs=26.7

Q ss_pred             CCeeeCCCCCCCEEEccC----CcEEEEecccccc
Q 024828           88 KHIIHRDLKPSNLLINHR----GEVKITDFGVSAI  118 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~----~~~~l~df~~~~~  118 (262)
                      ..++|+|+++.||+++.+    +.+.++||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            579999999999999764    6799999997754


No 270
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.69  E-value=0.0023  Score=51.68  Aligned_cols=44  Identities=18%  Similarity=0.089  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHhcCC---CCeeEeeceEEEECCeEEEEEeecCCCCH
Q 024828           12 RRQIAQELKINQSSQ---CPYVVVCYQSFYSNGAISIILEYMDGGSL   55 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~sL   55 (262)
                      ...+..|...|+.+.   ...+++++......+..++||||++|..+
T Consensus        72 ~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           72 RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            567888988888873   36788888888878889999999998754


No 271
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.26  E-value=0.0052  Score=48.94  Aligned_cols=40  Identities=10%  Similarity=-0.141  Sum_probs=30.5

Q ss_pred             HHHHHHHHHHHhcCCCC---eeEeeceEEEECCeEEEEEeecCCCCH
Q 024828           12 RRQIAQELKINQSSQCP---YVVVCYQSFYSNGAISIILEYMDGGSL   55 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~lv~e~~~~~sL   55 (262)
                      ...+.+|++.|+.+.+.   .+++++...    ..++||||++|.++
T Consensus        55 ~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~~   97 (288)
T 3d1u_A           55 DGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERPP   97 (288)
T ss_dssp             TTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCCC
T ss_pred             hHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCCC
Confidence            35788999999999654   566777653    36899999998764


No 272
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=95.51  E-value=0.013  Score=49.20  Aligned_cols=30  Identities=20%  Similarity=0.402  Sum_probs=26.7

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccc
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAI  118 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~  118 (262)
                      ..++|||+++.||+++.++ +.++||+.+..
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            7899999999999998766 99999987754


No 273
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=93.97  E-value=0.39  Score=36.22  Aligned_cols=114  Identities=11%  Similarity=0.139  Sum_probs=76.6

Q ss_pred             CCCeeEeeceEEEECCeEEEEEeecC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH-HHhhcCCeeeCCCCCCCEEEc
Q 024828           26 QCPYVVVCYQSFYSNGAISIILEYMD-GGSLADFLKKVKTIPEEYLAAICEQVLKGLL-YLHHEKHIIHRDLKPSNLLIN  103 (262)
Q Consensus        26 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~-~lh~~~~i~H~dl~p~nil~~  103 (262)
                      .||++  -..+-.+++.+.+.++.-+ +.+... ++   ..+...++.++.+|+.... +++   .-+|--++|+|++++
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i~---~~~~~eKlrll~nl~~L~~~~~~---~r~tf~l~P~NL~f~  118 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-IR---KTTLLSRIRAAIHLVSKVKHHSA---RRLIFIVCPENLMFN  118 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-HH---TSCHHHHHHHHHHHHHHHSSCCS---SSEECCCCGGGEEEC
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-HH---hcCHHHHHHHHHHHHHHHHHhhh---CceeEEEeCceEEEe
Confidence            57777  4444466777777777653 334443 33   4789999999999988766 444   368999999999999


Q ss_pred             cCCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 024828          104 HRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYS  170 (262)
Q Consensus       104 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  170 (262)
                      .++.+++.-.|.-.                 -+||.-     .+...=.-..=|++..++.++..|.
T Consensus       119 ~~~~p~i~hRGi~~-----------------~lpP~e-----~~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          119 RALEPFFLHVGVKE-----------------SLPPDE-----WDDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             TTCCEEESCCEETT-----------------TBSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             CCCcEEEEEcCCcc-----------------cCCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            99999998766421                 123322     1222223366688888888877663


No 274
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=93.64  E-value=0.021  Score=45.89  Aligned_cols=31  Identities=23%  Similarity=0.253  Sum_probs=25.7

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccc
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAI  118 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~  118 (262)
                      .+++|+|+++.||+++.++.+.++||+.+..
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            4699999999999998765568999987643


No 275
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=93.41  E-value=0.082  Score=42.50  Aligned_cols=28  Identities=18%  Similarity=0.198  Sum_probs=24.4

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEeccccc
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSA  117 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~  117 (262)
                      ..++|+|+++.||+++ + .+.++||+.+.
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            5689999999999998 4 89999998764


No 276
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=93.35  E-value=0.068  Score=45.46  Aligned_cols=36  Identities=31%  Similarity=0.294  Sum_probs=23.3

Q ss_pred             HHHHHHHhcCCCCee-EeeceEEEECCeEEEEEeecCCCCH
Q 024828           16 AQELKINQSSQCPYV-VVCYQSFYSNGAISIILEYMDGGSL   55 (262)
Q Consensus        16 ~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~sL   55 (262)
                      .+|..+++.+...++ +++++.+.  +.  +|++|++|.+|
T Consensus       152 ~~E~~vl~~L~~~gl~P~ll~~~~--~G--~v~e~I~G~~l  188 (458)
T 2qg7_A          152 EREKKISCILYNKNIAKKIYVFFT--NG--RIEEFMDGYAL  188 (458)
T ss_dssp             HHHHHHHHHHTTSSSBCCEEEEET--TE--EEEECCCSEEC
T ss_pred             HHHHHHHHHHHhcCCCCCEEEEeC--Ce--EEEEeeCCccC
Confidence            478888887754444 56666653  22  59999987444


No 277
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=93.26  E-value=0.073  Score=43.27  Aligned_cols=31  Identities=19%  Similarity=0.428  Sum_probs=27.1

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccc
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAI  118 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~  118 (262)
                      .+++|+|+.+.||+++.++.+.++||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            5699999999999998778899999987653


No 278
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=92.90  E-value=0.28  Score=36.92  Aligned_cols=115  Identities=10%  Similarity=0.084  Sum_probs=77.2

Q ss_pred             CCCeeEeeceEEEECCeEEEEEeecC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEcc
Q 024828           26 QCPYVVVCYQSFYSNGAISIILEYMD-GGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINH  104 (262)
Q Consensus        26 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~  104 (262)
                      .||+++.. .+-.+++.+.+.++.-+ +.+... +   ...+....+.++.+|+....++++   -+|--++|+|++++.
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i---k~~~~~eKlr~l~ni~~l~~~~~~---r~tf~L~P~NL~f~~  114 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I---KSFTKNEKLRYLLNIKNLEEVNRT---RYTFVLAPDELFFTR  114 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G---GGSCHHHHHHHHHHGGGGGGGGGS---SEECCCSGGGEEECT
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H---HhcCHHHHHHHHHHHHHHHHHhcC---ceEEEEecceEEEcC
Confidence            57888766 56666676666555543 223332 2   347899999999999887755543   588999999999999


Q ss_pred             CCcEEEEecccccccccCCCCcccccccccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 024828          105 RGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERISGGKYGYKSDIWSLGLVLLECATGQFPYS  170 (262)
Q Consensus       105 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  170 (262)
                      ++.+++.--|+-..                 ++|.     ..+...=.-..=|++..+++++..|.
T Consensus       115 ~~~p~i~~RGik~~-----------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          115 DGLPIAKTRGLQNV-----------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             TSCEEESCCEETTT-----------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             CCCEEEEEccCccC-----------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            99999886664221                 2222     12223333466688889999887774


No 279
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=92.72  E-value=0.14  Score=42.06  Aligned_cols=29  Identities=24%  Similarity=0.460  Sum_probs=23.9

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEeccccc
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSA  117 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~  117 (262)
                      .+++|+|+++.||+++.+ .+.++||..+.
T Consensus       212 ~~l~HgDl~~~Nil~~~~-~~~lID~e~a~  240 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNK-CLRLIDFEYSG  240 (369)
T ss_dssp             EEEECSCCCGGGEEECC--CEEECCCTTCE
T ss_pred             eEEEeCCCCcccEEecCC-cEEEEEecCCC
Confidence            458999999999999654 48999998764


No 280
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=92.35  E-value=0.055  Score=45.61  Aligned_cols=18  Identities=28%  Similarity=0.497  Sum_probs=15.2

Q ss_pred             CCeeeCCCCCCCEEEccC
Q 024828           88 KHIIHRDLKPSNLLINHR  105 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~  105 (262)
                      ..++|+|+.+.||+++.+
T Consensus       249 ~v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          249 VTFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EEEECSCCCGGGEEEEC-
T ss_pred             eEEEeCCCCCCeEEeeCC
Confidence            358999999999999875


No 281
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=91.69  E-value=0.11  Score=43.02  Aligned_cols=103  Identities=15%  Similarity=0.142  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHhcCC-CCeeEeeceEEEECCeEEEEEeecCCCCHH--------------HHHH---hc-----CCCC--
Q 024828           12 RRQIAQELKINQSSQ-CPYVVVCYQSFYSNGAISIILEYMDGGSLA--------------DFLK---KV-----KTIP--   66 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~--------------~~l~---~~-----~~~~--   66 (262)
                      ...+.+|.++++.+. +.-.+++++.+.+  .  +|+||++|.+|.              ..+.   ..     +...  
T Consensus        97 ~~~~~rE~~vl~~L~~~gv~P~ll~~~~~--g--~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l  172 (379)
T 3feg_A           97 VDSLVLESVMFAILAERSLGPQLYGVFPE--G--RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWL  172 (379)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSCCEEEEETT--E--EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEcCC--c--cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccH
Confidence            455668988888773 2223566655543  2  999999985542              1111   10     1111  


Q ss_pred             HHHHHHHHHHHHH-------------------HHHHHh----h---cCCeeeCCCCCCCEEEccC----CcEEEEecccc
Q 024828           67 EEYLAAICEQVLK-------------------GLLYLH----H---EKHIIHRDLKPSNLLINHR----GEVKITDFGVS  116 (262)
Q Consensus        67 ~~~~~~i~~~l~~-------------------~l~~lh----~---~~~i~H~dl~p~nil~~~~----~~~~l~df~~~  116 (262)
                      ...+..+..++-.                   .+..|.    .   ...++|+|+.+.||+++.+    +.+.++||..+
T Consensus       173 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a  252 (379)
T 3feg_A          173 FGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS  252 (379)
T ss_dssp             HHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred             HHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence            2344445544321                   122222    1   2358999999999999876    68999999876


Q ss_pred             cc
Q 024828          117 AI  118 (262)
Q Consensus       117 ~~  118 (262)
                      ..
T Consensus       253 ~~  254 (379)
T 3feg_A          253 SY  254 (379)
T ss_dssp             EE
T ss_pred             Cc
Confidence            43


No 282
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.61  E-value=0.11  Score=43.34  Aligned_cols=30  Identities=23%  Similarity=0.366  Sum_probs=26.0

Q ss_pred             CCeeeCCCCCCCEEEccC------CcEEEEeccccc
Q 024828           88 KHIIHRDLKPSNLLINHR------GEVKITDFGVSA  117 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~------~~~~l~df~~~~  117 (262)
                      ..++|+|+.+.||+++.+      +.+.++||..+.
T Consensus       244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             eeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            358999999999999876      789999998764


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.35  E-value=0.28  Score=40.86  Aligned_cols=30  Identities=23%  Similarity=0.418  Sum_probs=24.7

Q ss_pred             CeeeCCCCCCCEEEc------cCCcEEEEecccccc
Q 024828           89 HIIHRDLKPSNLLIN------HRGEVKITDFGVSAI  118 (262)
Q Consensus        89 ~i~H~dl~p~nil~~------~~~~~~l~df~~~~~  118 (262)
                      .++|+|+.+.||++.      .++.+.++||.+|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            368999999999993      456799999988754


No 284
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=85.45  E-value=0.67  Score=38.88  Aligned_cols=30  Identities=33%  Similarity=0.581  Sum_probs=25.8

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEecccccc
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDFGVSAI  118 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df~~~~~  118 (262)
                      ..++|+|+.+.||+ +.++.+.++||..+..
T Consensus       262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             EEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             ceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            35899999999999 7778899999987753


No 285
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=77.72  E-value=12  Score=33.56  Aligned_cols=45  Identities=24%  Similarity=0.327  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHH--HHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEeccccc
Q 024828           68 EYLAAICEQVL--KGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSA  117 (262)
Q Consensus        68 ~~~~~i~~~l~--~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~  117 (262)
                      ..+..++..++  ..+.|+   .|+  +|=+++||+++.+|.+.=+|||..-
T Consensus       529 ~ar~nF~~SlA~~Svv~YI---LGl--GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          529 EVMDTYIKSCAGYCVITYL---LGV--GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HTC--CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             HHHHHHHHHHHHHHHHHHH---ccC--CCCCCcceEEeCCCCEEEEeehhhh
Confidence            34455555543  334555   333  7889999999999999999999864


No 286
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=74.40  E-value=1.1  Score=35.23  Aligned_cols=25  Identities=32%  Similarity=0.359  Sum_probs=20.0

Q ss_pred             CCeeeCCCCCCCEEEccCCcEEEEec
Q 024828           88 KHIIHRDLKPSNLLINHRGEVKITDF  113 (262)
Q Consensus        88 ~~i~H~dl~p~nil~~~~~~~~l~df  113 (262)
                      ..++|+|+.+.|++++.++. .+.|-
T Consensus       188 p~LvHGDlw~gNvl~~~~g~-~~iDp  212 (288)
T 3f7w_A          188 PARIHGDLWNGNVLWQDDGA-VVIDP  212 (288)
T ss_dssp             CEEECSCCSGGGEEEETTEE-EECSC
T ss_pred             CeeeecCCCCCcEEEcCCCe-EEEec
Confidence            46999999999999988774 45553


No 287
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=66.84  E-value=35  Score=29.97  Aligned_cols=81  Identities=17%  Similarity=0.315  Sum_probs=48.0

Q ss_pred             EeeceEEEECCeEEEEEeecCCCCHHHHHHh----------cCC-------CCHHHHHHHHHHHH--HHHHHHhhcCCee
Q 024828           31 VVCYQSFYSNGAISIILEYMDGGSLADFLKK----------VKT-------IPEEYLAAICEQVL--KGLLYLHHEKHII   91 (262)
Q Consensus        31 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~----------~~~-------~~~~~~~~i~~~l~--~~l~~lh~~~~i~   91 (262)
                      +..|.+...+....+ .|++++.++.+.+.+          ..+       ........++..++  ..+.|+   .|+ 
T Consensus       402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YI---LGi-  476 (614)
T 3ls8_A          402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYI---LGV-  476 (614)
T ss_dssp             CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHH---HTC-
T ss_pred             eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhhee---eec-
Confidence            344555554444333 466665555555432          211       11334455555544  345555   333 


Q ss_pred             eCCCCCCCEEEccCCcEEEEeccccc
Q 024828           92 HRDLKPSNLLINHRGEVKITDFGVSA  117 (262)
Q Consensus        92 H~dl~p~nil~~~~~~~~l~df~~~~  117 (262)
                       ||=+++||+++.+|++.=+|||..-
T Consensus       477 -gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          477 -GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             -CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             -cCCCCcceeEcCCCCEeeeehHHhh
Confidence             6888999999999999999999863


No 288
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=59.76  E-value=1.4  Score=36.32  Aligned_cols=17  Identities=6%  Similarity=0.182  Sum_probs=13.9

Q ss_pred             HHHHHHHHHHHHHhhcCC
Q 024828           72 AICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        72 ~i~~~l~~~l~~lh~~~~   89 (262)
                      .+..+++..|+.||+ ..
T Consensus       146 ~~~~~ia~~La~LH~-~~  162 (379)
T 3feg_A          146 VLSAAIATKMAQFHG-ME  162 (379)
T ss_dssp             HHHHHHHHHHHHHHT-CC
T ss_pred             HHHHHHHHHHHHHhC-CC
Confidence            467789999999998 54


No 289
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=47.82  E-value=37  Score=31.72  Aligned_cols=25  Identities=28%  Similarity=0.437  Sum_probs=22.4

Q ss_pred             CCCCCCCEEEccCCcEEEEeccccc
Q 024828           93 RDLKPSNLLINHRGEVKITDFGVSA  117 (262)
Q Consensus        93 ~dl~p~nil~~~~~~~~l~df~~~~  117 (262)
                      ||=+++||+++.+|.+.=+|||..-
T Consensus       804 gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          804 GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             cCCCCcceEEecCCCEEEEeehhhh
Confidence            7889999999999999999999864


No 290
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=44.42  E-value=10  Score=31.46  Aligned_cols=62  Identities=11%  Similarity=0.142  Sum_probs=39.7

Q ss_pred             HHHHHHHHhcCC-CCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           15 IAQELKINQSSQ-CPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        15 ~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      +..|..+++.+. +--.+++++.+..  .  +|++|++|.+|..     ..+.   -..+..+++..|+.||+ ..
T Consensus       121 ~~~E~~~l~~L~~~Gi~Pkl~~~~~~--G--~i~efI~G~~L~~-----~dl~---~p~~~~~iA~~L~~LH~-~~  183 (401)
T 3f2s_A          121 MVLESVMFAILAERSLGPKLYGIFPQ--G--RLEQFIPSRRLDT-----EELS---LPDISAEIAEKMATFHG-MK  183 (401)
T ss_dssp             HHHHHHHHHHHHHTTSSCCEEEEETT--E--EEEECCCEEECCG-----GGGG---SHHHHHHHHHHHHHHHT-CC
T ss_pred             hHHHHHHHHHHHhcCCCCeEEEEeCC--C--eEEEecCCccCCH-----HHHh---hHHHHHHHHHHHHHHhC-CC
Confidence            345888887773 3335567766642  2  8999999855431     0111   13467888999999997 54


No 291
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
Probab=41.28  E-value=15  Score=22.97  Aligned_cols=33  Identities=27%  Similarity=0.658  Sum_probs=27.4

Q ss_pred             HHHHHHHhhcCCcCCCCCHHHHhc-----CccccccCC
Q 024828          205 FCSFISACVQKEPQQRLSAQELMT-----HPFLKMYGD  237 (262)
Q Consensus       205 l~~li~~~l~~~p~~Rpt~~~~l~-----h~~~~~~~~  237 (262)
                      -..||..++.-.|++|.|..||.+     .|||+..++
T Consensus        10 Y~~LI~~Ai~~sp~~~ltL~eIY~~i~~~fpyy~~~~~   47 (85)
T 3bpy_A           10 YAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGD   47 (85)
T ss_dssp             HHHHHHHHHHHSTTSCBCHHHHHHHHHHHCGGGTTCTT
T ss_pred             HHHHHHHHHHhCCcCCccHHHHHHHHHHhCcchhcCcc
Confidence            457889999999999999999864     599987753


No 292
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=40.74  E-value=1  Score=38.42  Aligned_cols=31  Identities=3%  Similarity=-0.035  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeEeeceEEEEC
Q 024828           10 SARRQIAQELKINQSSQCPYVVVCYQSFYSN   40 (262)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   40 (262)
                      ...++|..|++++.+++|+|+|++.++|...
T Consensus       321 ~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          321 QGSETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             ccHHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            3467899999999999999999999988753


No 293
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=39.86  E-value=11  Score=29.80  Aligned_cols=64  Identities=16%  Similarity=0.040  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHHhcCCC--CeeEeeceE-----EEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 024828           12 RRQIAQELKINQSSQC--PYVVVCYQS-----FYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYL   84 (262)
Q Consensus        12 ~~~~~~e~~~l~~l~h--~~i~~~~~~-----~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~l   84 (262)
                      ...+..|..+++.+..  -.+++++..     ...++..++++++++|.++.       ..+.    ..+.++...|+.+
T Consensus        64 ~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~-------~~~~----~~~~~~g~~La~l  132 (328)
T 1zyl_A           64 ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFE-------ADNI----DQMEAVGRYLGRM  132 (328)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECC-------SSCH----HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCCCCCC-------CCCH----HHHHHHHHHHHHH
Confidence            4456677777776631  123444432     23456778999999885432       1122    3356777888888


Q ss_pred             hh
Q 024828           85 HH   86 (262)
Q Consensus        85 h~   86 (262)
                      |.
T Consensus       133 H~  134 (328)
T 1zyl_A          133 HQ  134 (328)
T ss_dssp             HH
T ss_pred             HH
Confidence            87


No 294
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=38.63  E-value=64  Score=30.59  Aligned_cols=25  Identities=24%  Similarity=0.454  Sum_probs=22.9

Q ss_pred             CCCCCCCEEEccCCcEEEEeccccc
Q 024828           93 RDLKPSNLLINHRGEVKITDFGVSA  117 (262)
Q Consensus        93 ~dl~p~nil~~~~~~~~l~df~~~~  117 (262)
                      ||=+++||+++.+|.+.=+|||..-
T Consensus       940 GDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          940 GDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             CCCCCccEEEecCCCEEEEeehhhh
Confidence            7889999999999999999999763


No 295
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP; 1.87A {Homo sapiens} SCOP: a.4.5.14 PDB: 3co6_C*
Probab=31.73  E-value=25  Score=23.16  Aligned_cols=33  Identities=27%  Similarity=0.658  Sum_probs=27.8

Q ss_pred             HHHHHHHhhcCCcCCCCCHHHHhc-----CccccccCC
Q 024828          205 FCSFISACVQKEPQQRLSAQELMT-----HPFLKMYGD  237 (262)
Q Consensus       205 l~~li~~~l~~~p~~Rpt~~~~l~-----h~~~~~~~~  237 (262)
                      -..||..++.-.|.+|.|..||.+     .|||+..++
T Consensus        29 Y~~LI~~AI~~sp~~~LtL~eIY~~I~~~fPyyr~~~~   66 (110)
T 3l2c_A           29 YAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGD   66 (110)
T ss_dssp             HHHHHHHHHHHSTTSCBCHHHHHHHHHHHCGGGTTCTT
T ss_pred             HHHHHHHHHHhCCccCcCHHHHHHHHHHhCchhhcCcc
Confidence            567999999999999999999875     499987653


No 296
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=31.51  E-value=1.4e+02  Score=25.75  Aligned_cols=64  Identities=19%  Similarity=0.226  Sum_probs=55.2

Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeeCCCCCCCEEEccCCcEEEEecccccccc
Q 024828           53 GSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMA  120 (262)
Q Consensus        53 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~i~H~dl~p~nil~~~~~~~~l~df~~~~~~~  120 (262)
                      ..|--++++   .+.+++...+.+--.|+..|.. .||.-||.-..|+=++..|+|...|++-.+.+.
T Consensus       420 tPLNLYL~~---a~~~~~~~av~eYG~AIKqLAa-ANIFPGDML~KNFGVTRhgRVVFYDYDEI~ylT  483 (578)
T 3eps_A          420 VPLNIWLEQ---VEGQQLRDAIEEYGNAIRQLAA-ANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMT  483 (578)
T ss_dssp             EEHHHHHHH---CCTHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCGGGCEEST
T ss_pred             cchhHHHhh---CCHHHHHHHHHHHHHHHHHHHH-hcCCCcccccccCCccccceEEEecccceeeec
Confidence            367777776   4667788889999999999998 999999999999999999999999998766554


No 297
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=28.88  E-value=22  Score=29.65  Aligned_cols=59  Identities=27%  Similarity=0.352  Sum_probs=35.5

Q ss_pred             HHHHHHHhcCC-CCeeEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828           16 AQELKINQSSQ-CPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus        16 ~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      .+|.++++.+. +.-.+++++.+  .+  ++|++|++|.+|..     ..+.   ...++.+++..|+.||+
T Consensus       121 ~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~efI~G~~l~~-----~~l~---~~~~~~~ia~~La~LH~  180 (424)
T 3mes_A          121 KVELDVFRYLSNINIAPNIIADF--PE--GRIEEFIDGEPLTT-----KQLQ---LTHICVEVAKNMGSLHI  180 (424)
T ss_dssp             HHHHHHHHHHHHTTSSCCEEEEE--TT--EEEEECCCSEECCT-----GGGG---SHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhcCCCCCEEEEc--CC--CEEEEEeCCccCCh-----hhcC---CHHHHHHHHHHHHHHhc
Confidence            46777776663 22234555433  23  68999999855421     0111   12467788999999998


No 298
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=28.62  E-value=18  Score=30.10  Aligned_cols=64  Identities=20%  Similarity=0.207  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHhcCCCCe-eEeeceEEEECCeEEEEEeecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 024828           13 RQIAQELKINQSSQCPY-VVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHHEKH   89 (262)
Q Consensus        13 ~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~~~~   89 (262)
                      ..+.+|..+++.+...+ .+++++.+.  +.  +|++|++|.+|...     .+.   ...++.+++..|+.||. ..
T Consensus       120 ~~li~E~~~l~~L~~~g~~P~l~~~~~--~g--~v~e~l~G~~l~~~-----~l~---~~~~~~~ia~~La~LH~-~~  184 (429)
T 1nw1_A          120 SHLVAESVIFTLLSERHLGPKLYGIFS--GG--RLEEYIPSRPLSCH-----EIS---LAHMSTKIAKRVAKVHQ-LE  184 (429)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCEEEEET--TE--EEECCCCEEECCTT-----GGG---SHHHHHHHHHHHHHHTT-CC
T ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEeC--CC--EEEEEeCCcccChh-----hcC---CHHHHHHHHHHHHHHhC-Cc
Confidence            44557888888774223 356665543  22  89999987554311     111   12457788899999997 44


No 299
>3coa_C Forkhead box protein O1; winged helix, forkhead domain, chromosomal rearrangement; HET: DNA; 2.20A {Homo sapiens} PDB: 3co7_C* 2k86_A 2uzk_A
Probab=28.17  E-value=36  Score=22.64  Aligned_cols=32  Identities=19%  Similarity=0.554  Sum_probs=26.8

Q ss_pred             HHHHHHHhhcCCcCCCCCHHHHhc-----CccccccC
Q 024828          205 FCSFISACVQKEPQQRLSAQELMT-----HPFLKMYG  236 (262)
Q Consensus       205 l~~li~~~l~~~p~~Rpt~~~~l~-----h~~~~~~~  236 (262)
                      -..||...+.-.|++|.|..||.+     .|||+..+
T Consensus        16 Ya~LI~~AI~~sp~~~LTL~eIY~~I~~~fPyyr~~~   52 (117)
T 3coa_C           16 YADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDKG   52 (117)
T ss_dssp             HHHHHHHHHHTSTTSCBCHHHHHHHHHHHCGGGTTCC
T ss_pred             HHHHHHHHHHhCCCCCccHHHHHHHHHHhCcccccCC
Confidence            567899999999999999999864     48888765


No 300
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=25.97  E-value=80  Score=25.91  Aligned_cols=52  Identities=13%  Similarity=-0.014  Sum_probs=32.7

Q ss_pred             CeeEeeceEEEECCeEEEEEeec-CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Q 024828           28 PYVVVCYQSFYSNGAISIILEYM-DG-GSLADFLKKVKTIPEEYLAAICEQVLKGLLYLHH   86 (262)
Q Consensus        28 ~~i~~~~~~~~~~~~~~lv~e~~-~~-~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~lh~   86 (262)
                      ..+++++.+.  .+..++|||++ +| ..+...+......+     ..+.++...|+.+|.
T Consensus        99 ~~vP~v~~~~--~~~~~lv~e~l~~g~~~l~~~l~~~~~~~-----~~~~~lg~~La~lH~  152 (420)
T 2pyw_A           99 DHVPEVYHFD--RTMALIGMRYLEPPHIILRKGLIAGIEYP-----FLADHMSDYMAKTLF  152 (420)
T ss_dssp             GGSCCEEEEE--TTTTEEEECCCCTTCEEHHHHHHHTCCCT-----THHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEC--CCccEEEEeecCCcchhHHHHHhcCCCCH-----HHHHHHHHHHHHHHH
Confidence            4556666654  45678999999 87 45555544322222     245667777888886


No 301
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=25.69  E-value=29  Score=32.27  Aligned_cols=25  Identities=28%  Similarity=0.444  Sum_probs=22.7

Q ss_pred             CCCCCCCEEEccCCcEEEEeccccc
Q 024828           93 RDLKPSNLLINHRGEVKITDFGVSA  117 (262)
Q Consensus        93 ~dl~p~nil~~~~~~~~l~df~~~~  117 (262)
                      ||=+++||+++.+|.+.=+|||..-
T Consensus       788 gDRH~~NILid~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          788 GDRHSDNIMIRESGQLFHIDFGHFL  812 (940)
T ss_dssp             CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred             CCCCcccEEEecCCCEEEEeehhhh
Confidence            7889999999999999999999763


No 302
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=23.04  E-value=59  Score=21.11  Aligned_cols=26  Identities=12%  Similarity=0.286  Sum_probs=22.5

Q ss_pred             HHHHHHHHhhcCCcCCCCCHHHHhcC
Q 024828          204 EFCSFISACVQKEPQQRLSAQELMTH  229 (262)
Q Consensus       204 ~l~~li~~~l~~~p~~Rpt~~~~l~h  229 (262)
                      .+++.|-.++..+|.++.|+.++.+.
T Consensus        51 ~iRN~iI~~yr~nP~~yLT~t~~r~~   76 (104)
T 2fq3_A           51 RYRNFMVNSYRLNPNEYFSVTTARRN   76 (104)
T ss_dssp             HHHHHHHHHHHHCTTSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHhCCceeeeHHHHHHH
Confidence            46889999999999999999988754


No 303
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=20.68  E-value=59  Score=30.79  Aligned_cols=25  Identities=28%  Similarity=0.442  Sum_probs=22.6

Q ss_pred             CCCCCCCEEEccCCcEEEEeccccc
Q 024828           93 RDLKPSNLLINHRGEVKITDFGVSA  117 (262)
Q Consensus        93 ~dl~p~nil~~~~~~~~l~df~~~~  117 (262)
                      +|=+++||+++.+|++.=+|||..-
T Consensus       937 gDRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          937 GDRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred             cCCCCcceEEeCCCCEEEEeehhhh
Confidence            6888999999999999999999863


Done!