Query 024830
Match_columns 262
No_of_seqs 119 out of 337
Neff 2.7
Searched_HMMs 46136
Date Fri Mar 29 07:43:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024830.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024830hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02681 DUF212: Divergent PAP 100.0 1.1E-50 2.3E-55 338.5 11.2 106 154-259 1-106 (141)
2 COG1963 Uncharacterized protei 100.0 1.9E-46 4.2E-51 317.1 11.2 109 150-258 3-111 (153)
3 cd03394 PAP2_like_5 PAP2_like_ 97.1 0.0039 8.4E-08 48.1 8.1 54 160-217 9-62 (106)
4 cd03383 PAP2_diacylglycerolkin 97.1 0.0025 5.4E-08 51.1 7.2 71 154-234 5-78 (109)
5 PF01569 PAP2: PAP2 superfamil 95.8 0.051 1.1E-06 41.0 7.2 41 193-233 48-92 (129)
6 cd03391 PAP2_containing_2_like 95.7 0.019 4.2E-07 47.9 5.0 72 161-234 54-131 (159)
7 cd03382 PAP2_dolichyldiphospha 95.6 0.087 1.9E-06 43.8 8.4 49 162-213 50-100 (159)
8 cd03388 PAP2_SPPase1 PAP2_like 95.5 0.064 1.4E-06 43.9 7.2 53 160-214 39-98 (151)
9 cd03392 PAP2_like_2 PAP2_like_ 95.5 0.059 1.3E-06 44.5 7.1 52 160-213 68-120 (182)
10 cd01610 PAP2_like PAP2_like pr 95.5 0.054 1.2E-06 39.7 6.1 53 163-217 12-74 (122)
11 cd03393 PAP2_like_3 PAP2_like_ 95.4 0.05 1.1E-06 43.0 6.1 54 159-214 18-78 (125)
12 PRK09597 lipid A 1-phosphatase 95.2 0.089 1.9E-06 46.9 7.6 71 161-233 84-156 (190)
13 cd03385 PAP2_BcrC_like PAP2_li 94.3 0.27 5.9E-06 39.7 7.8 40 192-233 75-114 (144)
14 cd03395 PAP2_like_4 PAP2_like_ 94.0 0.15 3.4E-06 42.3 6.1 71 161-234 64-143 (177)
15 PLN02525 phosphatidic acid pho 93.8 0.14 3E-06 48.9 5.9 71 164-234 45-133 (352)
16 cd03389 PAP2_lipid_A_1_phospha 93.2 0.39 8.5E-06 40.8 7.2 54 160-215 75-139 (186)
17 cd03384 PAP2_wunen PAP2, wunen 91.8 0.74 1.6E-05 38.1 7.0 20 194-213 72-91 (150)
18 COG0671 PgpB Membrane-associat 91.8 1.1 2.4E-05 35.1 7.5 44 192-235 132-181 (232)
19 PRK11837 undecaprenyl pyrophos 91.5 0.61 1.3E-05 40.8 6.4 72 159-234 64-141 (202)
20 KOG3146 Dolichyl pyrophosphate 89.7 1.2 2.6E-05 41.2 6.9 78 165-242 58-153 (228)
21 smart00014 acidPPc Acid phosph 89.5 1 2.2E-05 34.5 5.4 52 163-214 4-65 (116)
22 cd03390 PAP2_containing_1_like 89.5 0.83 1.8E-05 38.7 5.4 20 194-213 110-129 (193)
23 PRK10699 phosphatidylglyceroph 89.5 1.6 3.4E-05 40.1 7.5 41 194-234 157-199 (244)
24 cd03381 PAP2_glucose_6_phospha 88.7 1 2.2E-05 40.8 5.7 20 193-212 71-90 (235)
25 cd03396 PAP2_like_6 PAP2_like_ 86.3 4.5 9.8E-05 34.5 8.0 18 193-210 121-138 (197)
26 PLN02731 Putative lipid phosph 82.1 5.3 0.00011 38.4 7.2 19 195-213 180-198 (333)
27 PLN02250 lipid phosphate phosp 78.3 7.9 0.00017 36.7 7.0 20 194-213 161-180 (314)
28 cd03380 PAP2_like_1 PAP2_like_ 78.0 3.6 7.8E-05 35.2 4.3 25 192-216 141-165 (209)
29 cd03386 PAP2_Aur1_like PAP2_li 77.2 2.7 5.8E-05 35.4 3.3 43 192-236 115-157 (186)
30 KOG2822 Sphingoid base-phospha 72.3 3.5 7.6E-05 40.9 3.1 58 164-222 121-189 (407)
31 PF14378 PAP2_3: PAP2 superfam 58.4 13 0.00028 31.2 3.6 47 195-242 127-173 (191)
32 cd03397 PAP2_acid_phosphatase 56.2 10 0.00022 33.7 2.8 24 191-214 147-170 (232)
33 cd03398 PAP2_haloperoxidase PA 50.7 1.5E+02 0.0031 26.2 9.0 26 192-217 143-168 (232)
34 PLN02715 lipid phosphate phosp 50.3 48 0.001 31.9 6.3 20 194-213 185-204 (327)
35 PF14362 DUF4407: Domain of un 48.3 26 0.00056 31.7 4.0 64 122-185 8-75 (301)
36 PF09877 DUF2104: Predicted me 44.8 65 0.0014 26.8 5.5 72 161-232 6-94 (99)
37 COG2246 Predicted membrane pro 26.1 1.3E+02 0.0029 25.1 4.6 78 126-215 16-100 (139)
38 PF10066 DUF2304: Uncharacteri 25.5 79 0.0017 25.3 3.0 78 176-257 19-102 (115)
39 PRK11660 putative transporter; 25.0 1.3E+02 0.0029 30.0 5.1 61 160-220 286-357 (568)
40 PF02714 DUF221: Domain of unk 23.6 3.6E+02 0.0079 24.2 7.2 78 157-234 196-281 (325)
41 PF00916 Sulfate_transp: Sulfa 22.0 1.1E+02 0.0023 26.7 3.4 34 193-226 198-231 (280)
42 PF12430 ABA_GPCR: Abscisic ac 21.9 1.7E+02 0.0036 25.7 4.6 94 133-234 92-190 (196)
43 PRK13841 conjugal transfer pro 21.6 8.5E+02 0.018 24.6 10.2 111 95-231 37-162 (391)
44 TIGR00697 conserved hypothetic 20.4 1.9E+02 0.0041 25.6 4.7 37 147-183 90-129 (202)
45 TIGR00815 sulP high affinity s 20.3 1.6E+02 0.0035 29.3 4.6 65 158-223 264-340 (563)
46 KOG4491 Predicted membrane pro 20.0 1.7E+02 0.0037 28.4 4.5 61 126-198 62-133 (323)
No 1
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=100.00 E-value=1.1e-50 Score=338.48 Aligned_cols=106 Identities=51% Similarity=0.836 Sum_probs=103.9
Q ss_pred HhcChhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhcCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHHHHhhh
Q 024830 154 LAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVM 233 (262)
Q Consensus 154 Ll~N~vLiaAliAw~vAQ~iKvii~~l~~rk~D~~~lf~SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~VfAlIVM 233 (262)
|++|++|++|++||++||++|++++++++|+|||+++|+||||||||||+|+||||++|+++||+||+||+|++||+|||
T Consensus 1 l~~N~~l~~a~~a~~~AQ~iK~~~~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IVm 80 (141)
T PF02681_consen 1 LLSNKVLIAALIAWFIAQFIKVFINYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIVM 80 (141)
T ss_pred CcCChHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhhe
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHHhcC
Q 024830 234 YDAIGVRRHAGMQAEVTNIVARAVAM 259 (262)
Q Consensus 234 YDA~GVRRaaGkQA~vLN~Lieel~~ 259 (262)
|||+||||++||||++||+|++++++
T Consensus 81 yDA~GVRr~aG~qA~~lN~l~~~~~~ 106 (141)
T PF02681_consen 81 YDAMGVRRAAGKQAKVLNQLIEELEE 106 (141)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999853
No 2
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=1.9e-46 Score=317.06 Aligned_cols=109 Identities=45% Similarity=0.703 Sum_probs=107.0
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhcCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 024830 150 FVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFS 229 (262)
Q Consensus 150 ~l~~Ll~N~vLiaAliAw~vAQ~iKvii~~l~~rk~D~~~lf~SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~VfA 229 (262)
.+.++|+|.+|++|++||+.||++|++|+++++||+||+.+++||||||||||+|+||+|++|+++||+||+||||++||
T Consensus 3 ~~~~if~n~~llsal~a~~~AQvIKv~I~~~~~rk~~~~~~~sTGGMPSsHSA~VtALat~ial~~G~dS~lFaiA~vfa 82 (153)
T COG1963 3 DLMEIFTNTPLLSALVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALTEGLDSPLFAIAAVFA 82 (153)
T ss_pred hHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeecCCCCchHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccchhhhhhhhhhHHHHHHHHHhc
Q 024830 230 LIVMYDAIGVRRHAGMQAEVTNIVARAVA 258 (262)
Q Consensus 230 lIVMYDA~GVRRaaGkQA~vLN~Lieel~ 258 (262)
+||||||.||||++|+||++||+|++|+.
T Consensus 83 iIvm~DA~GVRr~aG~QA~iLN~l~~~~~ 111 (153)
T COG1963 83 IIVMYDATGVRRSAGVQARILNQLIEELV 111 (153)
T ss_pred HHHhhhhhhHHHhccchHHHHHHHHHHHH
Confidence 99999999999999999999999999984
No 3
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=97.07 E-value=0.0039 Score=48.07 Aligned_cols=54 Identities=17% Similarity=0.062 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhcCCCCchhHHHHHHHHHHHHHHhcC
Q 024830 160 FVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGV 217 (262)
Q Consensus 160 LiaAliAw~vAQ~iKvii~~l~~rk~D~~~lf~SGGMPSSHSA~VsALATaIGl~eGf 217 (262)
+.+.+++.++.+++|.+++ +.|..+. .-...+|||.|++...++++.++...+.
T Consensus 9 ~~~~~~~~~~~~~lK~~~~--r~RP~~~--~~~~~sfPSgHa~~a~~~~~~~~~~~~~ 62 (106)
T cd03394 9 AEAAALTAAVTEGLKFAVG--RARPDGS--NNGYRSFPSGHTASAFAAATFLQYRYGW 62 (106)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCCCCC--CCCCCccCcHHHHHHHHHHHHHHHHHcc
Confidence 4455666677777777654 2222221 1567799999999999999999887765
No 4
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=97.06 E-value=0.0025 Score=51.11 Aligned_cols=71 Identities=23% Similarity=0.408 Sum_probs=44.9
Q ss_pred HhcChh---HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhcCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 024830 154 LAANPT---FVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSL 230 (262)
Q Consensus 154 Ll~N~v---LiaAliAw~vAQ~iKvii~~l~~rk~D~~~lf~SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~VfAl 230 (262)
+-+|+. +.+-+++.++.+++|.+++ +.|-. .+||||.|++...++++.+.+... ....-.+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~i~~~lK~~~~--r~RP~-------~~sFPSgHt~~a~a~a~~l~~~~~-~~~~~~~~~~~a~ 74 (109)
T cd03383 5 IGESPPHVTFVSLLIVIIVVVILKAYFG--RGTPL-------EGGMPSGHAAIAFSIATAISLITN-NPIISILSVLLAV 74 (109)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHhC--CCCCC-------CCCCChHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHH
Confidence 344544 3455567888888888763 22221 368999999999999998876421 1113345556666
Q ss_pred hhhc
Q 024830 231 IVMY 234 (262)
Q Consensus 231 IVMY 234 (262)
+|.+
T Consensus 75 lv~~ 78 (109)
T cd03383 75 MVAH 78 (109)
T ss_pred HHHH
Confidence 6654
No 5
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=95.80 E-value=0.051 Score=41.02 Aligned_cols=41 Identities=22% Similarity=0.381 Sum_probs=27.5
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhcCCCCh----hHHHHHHHHhhh
Q 024830 193 SGGMPSSHSALCTALTTSVALCHGVADSL----FPVCLGFSLIVM 233 (262)
Q Consensus 193 SGGMPSSHSA~VsALATaIGl~eGf~Spl----FAIA~VfAlIVM 233 (262)
.++|||.|++...+.++.+....+..... +.+..+++++|.
T Consensus 48 ~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 92 (129)
T PF01569_consen 48 FNSFPSGHAAIAAAFAFFLAYYLGSRGWIRILLFLLAIVLAFLVA 92 (129)
T ss_dssp S-SSS-HHHHHHHHHHHHHHHHCCCCHHHSEEHHHHHHHHHHHHH
T ss_pred CCcCcchhhhhHHHHHhhhhhhhhccccccchhhHHHHHHHHHhh
Confidence 35999999999999999988887766554 334444444443
No 6
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=95.70 E-value=0.019 Score=47.91 Aligned_cols=72 Identities=13% Similarity=0.007 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccch----hhhh--hcCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHHHHhhhc
Q 024830 161 VSGLFAWMIAQSTKVFLNFFVERKWDL----RLLF--ASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMY 234 (262)
Q Consensus 161 iaAliAw~vAQ~iKvii~~l~~rk~D~----~~lf--~SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~VfAlIVMY 234 (262)
.+.+++.++.+++|..+.- .|-+.. .... ..-+|||.|++...++++.+.+..+.......+.++++++|.+
T Consensus 54 ~~~~~~~~~~~~lK~~~~r--~RP~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~~~~~~~~~~~a~~v~~ 131 (159)
T cd03391 54 LGLLLDIITVAILKALVRR--RRPAYNSPDMLDYVAVDKYSFPSGHASRAAFVARFLLNHLVLAVPLRVLLVLWATVVGI 131 (159)
T ss_pred HHHHHHHHHHHHHHHHhCC--CCCCCCCCccchhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444556677777876542 222211 1112 2338999999999999988887655333344445555666544
No 7
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=95.59 E-value=0.087 Score=43.84 Aligned_cols=49 Identities=22% Similarity=0.114 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhh--hhhcCCCCchhHHHHHHHHHHHHH
Q 024830 162 SGLFAWMIAQSTKVFLNFFVERKWDLRL--LFASGGMPSSHSALCTALTTSVAL 213 (262)
Q Consensus 162 aAliAw~vAQ~iKvii~~l~~rk~D~~~--lf~SGGMPSSHSA~VsALATaIGl 213 (262)
+.+++.++.+++|.+++ +.| -+... --..-||||.|++...++++.+.+
T Consensus 50 ~~~~~~~~~~~lK~~~~--rpR-P~~~~~~~~~~~SFPSgHa~~~~~~~~~~~l 100 (159)
T cd03382 50 GLLANEALNYVLKRIIK--EPR-PCSGAYFVRSGYGMPSSHSQFMGFFAVYLLL 100 (159)
T ss_pred HHHHHHHHHHHHHHHhC--CCC-cCCCCcCCCCCCCCCchhHHHHHHHHHHHHH
Confidence 33445555566666553 122 22111 134669999999987777766654
No 8
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=95.51 E-value=0.064 Score=43.87 Aligned_cols=53 Identities=25% Similarity=0.231 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccch---hhh----hhcCCCCchhHHHHHHHHHHHHHH
Q 024830 160 FVSGLFAWMIAQSTKVFLNFFVERKWDL---RLL----FASGGMPSSHSALCTALTTSVALC 214 (262)
Q Consensus 160 LiaAliAw~vAQ~iKvii~~l~~rk~D~---~~l----f~SGGMPSSHSA~VsALATaIGl~ 214 (262)
+.+.+++.++.+++|.+++. .|-... ... -..-||||.|++...++++.+.+.
T Consensus 39 ~~~~~~~~~~~~~lK~~~~r--~RP~~~~~~~~~~~~~~~~~SFPSgH~~~a~~~~~~l~~~ 98 (151)
T cd03388 39 VVVLALGMYIGQFIKDLFCL--PRPSSPPVVRLTMSSAALEYGFPSTHAMNATAISFYLLIY 98 (151)
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCcCCCchhhhhccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence 44555677788888988773 222211 111 133489999999999999888764
No 9
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=95.50 E-value=0.059 Score=44.54 Aligned_cols=52 Identities=19% Similarity=0.045 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhh-hhhcCCCCchhHHHHHHHHHHHHH
Q 024830 160 FVSGLFAWMIAQSTKVFLNFFVERKWDLRL-LFASGGMPSSHSALCTALTTSVAL 213 (262)
Q Consensus 160 LiaAliAw~vAQ~iKvii~~l~~rk~D~~~-lf~SGGMPSSHSA~VsALATaIGl 213 (262)
+.+.+++.++.+++|.++. +.|-..... --...+|||.|++...+++..+.+
T Consensus 68 ~~~~~~~~~~~~~lK~~~~--r~RP~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~ 120 (182)
T cd03392 68 LLALLGGGALNTLLKLLVQ--RPRPPLHLLVPEGGYSFPSGHAMGATVLYGFLAY 120 (182)
T ss_pred HHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 4445677788888888875 222221111 124568999999999888766654
No 10
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=95.46 E-value=0.054 Score=39.65 Aligned_cols=53 Identities=23% Similarity=0.159 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhh----------hhcCCCCchhHHHHHHHHHHHHHHhcC
Q 024830 163 GLFAWMIAQSTKVFLNFFVERKWDLRLL----------FASGGMPSSHSALCTALTTSVALCHGV 217 (262)
Q Consensus 163 AliAw~vAQ~iKvii~~l~~rk~D~~~l----------f~SGGMPSSHSA~VsALATaIGl~eGf 217 (262)
...+.++.+.+|.+.. +.|-+..... -...||||.|++...++++.+....+-
T Consensus 12 ~~~~~~~~~~~k~~~~--~~rP~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~ 74 (122)
T cd01610 12 LLAGLLLTGVLKYLFG--RPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPR 74 (122)
T ss_pred HHHHHHHHHHHHHHhC--CCCCChHHhcCCccchhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 3344446777887732 3333332221 235899999999999999999887664
No 11
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=95.40 E-value=0.05 Score=42.96 Aligned_cols=54 Identities=15% Similarity=0.124 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccchh-------hhhhcCCCCchhHHHHHHHHHHHHHH
Q 024830 159 TFVSGLFAWMIAQSTKVFLNFFVERKWDLR-------LLFASGGMPSSHSALCTALTTSVALC 214 (262)
Q Consensus 159 vLiaAliAw~vAQ~iKvii~~l~~rk~D~~-------~lf~SGGMPSSHSA~VsALATaIGl~ 214 (262)
.+.+.+++.++.+++|.++. +.|-.... .--...|+||.|+++..++.+.+...
T Consensus 18 ~~~~~~~~~~~~~~lK~~~~--r~RP~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~ 78 (125)
T cd03393 18 LGLALCASGYLNAALKEVFK--IPRPFTYDGIQAIYEESAGGYGFPSGHAQTSATFWGSLMLH 78 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHC--CCCcCCCcccchhccCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 45667778888888888764 22322111 11245789999999887776666543
No 12
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=95.18 E-value=0.089 Score=46.89 Aligned_cols=71 Identities=17% Similarity=0.118 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--hcccchhhhhhcCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHHHHhhh
Q 024830 161 VSGLFAWMIAQSTKVFLNFFV--ERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVM 233 (262)
Q Consensus 161 iaAliAw~vAQ~iKvii~~l~--~rk~D~~~lf~SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~VfAlIVM 233 (262)
.+.+.+.++.+++|..++-.. +-+.+.+.--.+-||||.|++...+.++.+...++.... .+.++++++|+
T Consensus 84 ~al~~~~ll~~~LK~~~~R~~~~~~r~~~~p~~~~~SFPSGHt~~af~~a~~l~~~~~~~~~--~~~l~lallVg 156 (190)
T PRK09597 84 NASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSFKKY--WWLLPLIPLTM 156 (190)
T ss_pred HHHHHHHHHHHHHHHHhccccccccccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHchhHH--HHHHHHHHHHH
Confidence 345555566667777665210 011222211123589999999998888777766666543 22334444443
No 13
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=94.31 E-value=0.27 Score=39.69 Aligned_cols=40 Identities=25% Similarity=0.239 Sum_probs=24.5
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHHHHhhh
Q 024830 192 ASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVM 233 (262)
Q Consensus 192 ~SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~VfAlIVM 233 (262)
..-+|||.|++...++++.+.+.+-- -...+.++++++|+
T Consensus 75 ~~~SFPSgH~~~~~~~~~~l~~~~~~--~~~~~~~~~a~~v~ 114 (144)
T cd03385 75 ADSSFPSDHTTLFFSIAFSLLLRRRK--WAGWILLILALLVA 114 (144)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHH
Confidence 34689999999988888766543211 12333445555544
No 14
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=94.04 E-value=0.15 Score=42.32 Aligned_cols=71 Identities=25% Similarity=0.162 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhh------hh---hcCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHHHHh
Q 024830 161 VSGLFAWMIAQSTKVFLNFFVERKWDLRL------LF---ASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLI 231 (262)
Q Consensus 161 iaAliAw~vAQ~iKvii~~l~~rk~D~~~------lf---~SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~VfAlI 231 (262)
.+.+.+.++.+++|.++.- .|-..... +. ..=++||.|++...++++.+.+..--. ....+.+++++.
T Consensus 64 ~~~~~~~~~~~~lK~~~~r--~RP~~~~~~~~~~~~~~~~~~~SFPSgHt~~a~~~~~~l~~~~~~~-~~~~~~~~~~~~ 140 (177)
T cd03395 64 AVGFADQLASGFLKPLVAR--LRPCNALDGVRLVVLGDQGGSYSFASSHAANSFALALFIWLFFRRG-LFSPVLLLWALL 140 (177)
T ss_pred HHHHHHHHHHHHHHHHhCC--CCCCCCccccccccccCCCCCCCCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 3444556677777776652 22221111 11 223799999999999999887542110 233455666666
Q ss_pred hhc
Q 024830 232 VMY 234 (262)
Q Consensus 232 VMY 234 (262)
|.+
T Consensus 141 v~~ 143 (177)
T cd03395 141 VGY 143 (177)
T ss_pred HHH
Confidence 654
No 15
>PLN02525 phosphatidic acid phosphatase family protein
Probab=93.77 E-value=0.14 Score=48.92 Aligned_cols=71 Identities=17% Similarity=0.088 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhhh--------hc-CCCCchhHHHHHHHHHHHHHH----hcCCCC-----hhHHH
Q 024830 164 LFAWMIAQSTKVFLNFFVERKWDLRLLF--------AS-GGMPSSHSALCTALTTSVALC----HGVADS-----LFPVC 225 (262)
Q Consensus 164 liAw~vAQ~iKvii~~l~~rk~D~~~lf--------~S-GGMPSSHSA~VsALATaIGl~----eGf~Sp-----lFAIA 225 (262)
.++.++.|++|-++..-+=..-...++. .. =||||+||+..++++..+.+. ....++ .++++
T Consensus 45 ~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsFPSgHt~nA~av~~~ll~~l~~~~~~~~~~~~~~~~~l~ 124 (352)
T PLN02525 45 AFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGLPSSHTLNTVCLSGYLLHYVLSYLQNVDASVIFAGLALF 124 (352)
T ss_pred HHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHH
Confidence 4455778889977763221100111121 11 289999999999998766543 111122 13445
Q ss_pred HHHHHhhhc
Q 024830 226 LGFSLIVMY 234 (262)
Q Consensus 226 ~VfAlIVMY 234 (262)
+++++.|++
T Consensus 125 ~l~allV~~ 133 (352)
T PLN02525 125 CLLVALVGF 133 (352)
T ss_pred HHHHHHHHH
Confidence 566666655
No 16
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=93.22 E-value=0.39 Score=40.82 Aligned_cols=54 Identities=24% Similarity=0.220 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhh-----------hhhcCCCCchhHHHHHHHHHHHHHHh
Q 024830 160 FVSGLFAWMIAQSTKVFLNFFVERKWDLRL-----------LFASGGMPSSHSALCTALTTSVALCH 215 (262)
Q Consensus 160 LiaAliAw~vAQ~iKvii~~l~~rk~D~~~-----------lf~SGGMPSSHSA~VsALATaIGl~e 215 (262)
+++.+++.++.+.+|.++. +.|...... --...++||.|++...++++.+++..
T Consensus 75 ~~~~~~~~~i~~~lK~~~~--R~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~~~~~~l~~~~ 139 (186)
T cd03389 75 FATVALSGILVNLLKFIIG--RARPKLLFDDGLYGFDPFHADYAFTSFPSGHSATAGAAAAALALLF 139 (186)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCCChhhcCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHH
Confidence 3334455667777777764 222221111 01223799999999999998887654
No 17
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=91.82 E-value=0.74 Score=38.09 Aligned_cols=20 Identities=30% Similarity=0.370 Sum_probs=16.3
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 024830 194 GGMPSSHSALCTALTTSVAL 213 (262)
Q Consensus 194 GGMPSSHSA~VsALATaIGl 213 (262)
=+|||.||+...+.++.+.+
T Consensus 72 ~SFPSGHs~~a~~~~~~l~l 91 (150)
T cd03384 72 LSFPSGHASLSMYAAVFLAL 91 (150)
T ss_pred cCCCcHhHHHHHHHHHHHHH
Confidence 47999999999877776654
No 18
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=91.77 E-value=1.1 Score=35.12 Aligned_cols=44 Identities=23% Similarity=0.213 Sum_probs=29.9
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHhcCCCC------hhHHHHHHHHhhhcc
Q 024830 192 ASGGMPSSHSALCTALTTSVALCHGVADS------LFPVCLGFSLIVMYD 235 (262)
Q Consensus 192 ~SGGMPSSHSA~VsALATaIGl~eGf~Sp------lFAIA~VfAlIVMYD 235 (262)
..++|||.|++...+.++..++....-.. ...+.++++..|++.
T Consensus 132 ~~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~~S 181 (232)
T COG0671 132 SGYSFPSGHAAGAAAAALLLALLLPLRRALLRRVLLLILLLLLAALVGLS 181 (232)
T ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 45679999999998888777766554432 235566666666654
No 19
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=91.47 E-value=0.61 Score=40.77 Aligned_cols=72 Identities=8% Similarity=0.142 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccch------hhhhhcCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHHHHhh
Q 024830 159 TFVSGLFAWMIAQSTKVFLNFFVERKWDL------RLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIV 232 (262)
Q Consensus 159 vLiaAliAw~vAQ~iKvii~~l~~rk~D~------~~lf~SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~VfAlIV 232 (262)
.+.+.+++.++.+++|.+++ +.|.... -.--..-.+||.|++...+.++++-+...- ....+.++++++|
T Consensus 64 ~~~~~~~~~~~~~~lk~~~~--r~RP~~~~~~~~~~~~~~~~SFPSgHa~~~~~~a~~~l~~~~~--~~~~~~~~~a~lv 139 (202)
T PRK11837 64 IAIALAISLLVSWTIGHLFP--HDRPFVEGIGYNFLHHAADDSFPSDHGTVIFTFALAFLFWHRL--WSGSLLMAIAVAI 139 (202)
T ss_pred HHHHHHHHHHHHHHHHHHhc--CCCCCCCccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 34555777888888888775 2222110 001244679999999877776543222110 1233445555555
Q ss_pred hc
Q 024830 233 MY 234 (262)
Q Consensus 233 MY 234 (262)
++
T Consensus 140 a~ 141 (202)
T PRK11837 140 AW 141 (202)
T ss_pred HH
Confidence 54
No 20
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=89.73 E-value=1.2 Score=41.18 Aligned_cols=78 Identities=24% Similarity=0.372 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhh--------hhhcCCCCchhHHHHHHHHH--HHHHHhcCCCChhHHHH--------
Q 024830 165 FAWMIAQSTKVFLNFFVERKWDLRL--------LFASGGMPSSHSALCTALTT--SVALCHGVADSLFPVCL-------- 226 (262)
Q Consensus 165 iAw~vAQ~iKvii~~l~~rk~D~~~--------lf~SGGMPSSHSA~VsALAT--aIGl~eGf~SplFAIA~-------- 226 (262)
+-.++.|++.=+++++..+.++-.| +-..=|||||||=.+.=.++ ..-..+++++--|..-.
T Consensus 58 ~~~~~G~v~Ne~in~viK~il~qpRP~~~~~~t~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~s~~~~i~s~~~l 137 (228)
T KOG3146|consen 58 IWFVIGQVSNEFINVVIKNILKQPRPVSFPDTTLRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNFSRFLFIKSGLLL 137 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 3344555555555544333222222 33444899999987754433 33445566665554433
Q ss_pred HHHHhhhcccchhhhh
Q 024830 227 GFSLIVMYDAIGVRRH 242 (262)
Q Consensus 227 VfAlIVMYDA~GVRRa 242 (262)
.++..|||-=.=.-.|
T Consensus 138 aLs~~v~~sRVyl~yH 153 (228)
T KOG3146|consen 138 ALSFYVCYSRVYLKYH 153 (228)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 5567777754333333
No 21
>smart00014 acidPPc Acid phosphatase homologues.
Probab=89.55 E-value=1 Score=34.47 Aligned_cols=52 Identities=19% Similarity=0.186 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc---------chhh-hhhcCCCCchhHHHHHHHHHHHHHH
Q 024830 163 GLFAWMIAQSTKVFLNFFVERKW---------DLRL-LFASGGMPSSHSALCTALTTSVALC 214 (262)
Q Consensus 163 AliAw~vAQ~iKvii~~l~~rk~---------D~~~-lf~SGGMPSSHSA~VsALATaIGl~ 214 (262)
.+.+-++.+++|..+..-+=-.+ +... --...++||.|++...+.++.+...
T Consensus 4 ~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~ 65 (116)
T smart00014 4 AVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLY 65 (116)
T ss_pred HHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHH
Confidence 45666677777777652221000 1111 1255789999999999998888753
No 22
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=89.52 E-value=0.83 Score=38.69 Aligned_cols=20 Identities=30% Similarity=0.341 Sum_probs=16.9
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 024830 194 GGMPSSHSALCTALTTSVAL 213 (262)
Q Consensus 194 GGMPSSHSA~VsALATaIGl 213 (262)
-+|||.|++...++++.+++
T Consensus 110 ~SFPSGHas~a~~~~~~l~l 129 (193)
T cd03390 110 KSFPSGHSSFAFAGLGFLSL 129 (193)
T ss_pred cCCCCccHHHHHHHHHHHHH
Confidence 37999999999888877765
No 23
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=89.51 E-value=1.6 Score=40.10 Aligned_cols=41 Identities=17% Similarity=0.142 Sum_probs=22.9
Q ss_pred CCCCchhHHHHHHHHH-HHHHH-hcCCCChhHHHHHHHHhhhc
Q 024830 194 GGMPSSHSALCTALTT-SVALC-HGVADSLFPVCLGFSLIVMY 234 (262)
Q Consensus 194 GGMPSSHSA~VsALAT-aIGl~-eGf~SplFAIA~VfAlIVMY 234 (262)
-||||.|++..++++. .+++- ..-....+.+.++.++.|+|
T Consensus 157 ySFPSGHa~~a~~~~l~~~~ll~~~~~~~~~~~~~~wa~~v~~ 199 (244)
T PRK10699 157 FAFPSGHTMFAASWALLAVGLLWPRRRYKTVALLMLWATGVMG 199 (244)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999998766543 22221 11112234455566666665
No 24
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=88.70 E-value=1 Score=40.84 Aligned_cols=20 Identities=30% Similarity=0.343 Sum_probs=14.6
Q ss_pred cCCCCchhHHHHHHHHHHHH
Q 024830 193 SGGMPSSHSALCTALTTSVA 212 (262)
Q Consensus 193 SGGMPSSHSA~VsALATaIG 212 (262)
..||||+|+...+++...+.
T Consensus 71 gysfPSGHam~a~a~~~~l~ 90 (235)
T cd03381 71 GPGSPSGHAMGTTAVLLVMV 90 (235)
T ss_pred CCCCCcHHHHHHHHHHHHHH
Confidence 57899999977776654443
No 25
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=86.29 E-value=4.5 Score=34.47 Aligned_cols=18 Identities=28% Similarity=0.316 Sum_probs=14.1
Q ss_pred cCCCCchhHHHHHHHHHH
Q 024830 193 SGGMPSSHSALCTALTTS 210 (262)
Q Consensus 193 SGGMPSSHSA~VsALATa 210 (262)
...+||.|++...+++..
T Consensus 121 ~~SFPSGHas~af~~~~~ 138 (197)
T cd03396 121 GCSFPSGHASAGFALLAL 138 (197)
T ss_pred CCcCCchhHHHHHHHHHH
Confidence 347999999998887543
No 26
>PLN02731 Putative lipid phosphate phosphatase
Probab=82.06 E-value=5.3 Score=38.37 Aligned_cols=19 Identities=21% Similarity=0.289 Sum_probs=16.7
Q ss_pred CCCchhHHHHHHHHHHHHH
Q 024830 195 GMPSSHSALCTALTTSVAL 213 (262)
Q Consensus 195 GMPSSHSA~VsALATaIGl 213 (262)
++||.||+...+..+.+++
T Consensus 180 SFPSGHSS~sfagl~fLsl 198 (333)
T PLN02731 180 SFPSGHTSWSFSGLGFLSL 198 (333)
T ss_pred CCCchhHHHHHHHHHHHHH
Confidence 7999999999888887776
No 27
>PLN02250 lipid phosphate phosphatase
Probab=78.28 E-value=7.9 Score=36.74 Aligned_cols=20 Identities=25% Similarity=0.278 Sum_probs=16.4
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 024830 194 GGMPSSHSALCTALTTSVAL 213 (262)
Q Consensus 194 GGMPSSHSA~VsALATaIGl 213 (262)
=.|||.||+...+..+.+++
T Consensus 161 ~SFPSGHSS~afa~~~fLsl 180 (314)
T PLN02250 161 KSFPSGHTSWSFAGLGFLSL 180 (314)
T ss_pred CCCCchhHHHHHHHHHHHHH
Confidence 37999999998888876665
No 28
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=78.01 E-value=3.6 Score=35.20 Aligned_cols=25 Identities=20% Similarity=0.169 Sum_probs=21.0
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHhc
Q 024830 192 ASGGMPSSHSALCTALTTSVALCHG 216 (262)
Q Consensus 192 ~SGGMPSSHSA~VsALATaIGl~eG 216 (262)
..+++||.|++...++++.+....+
T Consensus 141 ~~~SfPSGHa~~a~a~a~~l~~~~~ 165 (209)
T cd03380 141 KHPSYPSGHATFGGAAALVLAELFP 165 (209)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 5689999999999999988876544
No 29
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=77.23 E-value=2.7 Score=35.45 Aligned_cols=43 Identities=14% Similarity=0.070 Sum_probs=28.4
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHHHHhhhccc
Q 024830 192 ASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDA 236 (262)
Q Consensus 192 ~SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~VfAlIVMYDA 236 (262)
..+.|||.|++....++..+.....- ....+..++++.+.+-.
T Consensus 115 ~~~~fPS~H~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~i~~s~ 157 (186)
T cd03386 115 PFNAFPSLHVAWAVLAALFLWRHRRR--LLRWLAVLWPLLIWLST 157 (186)
T ss_pred CcceeCcHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 67889999999998888877765431 13445555555554433
No 30
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=72.29 E-value=3.5 Score=40.95 Aligned_cols=58 Identities=16% Similarity=0.157 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-----cchh--hhhhcCCCCchhHHHHHHHHHH----HHHHhcCCCChh
Q 024830 164 LFAWMIAQSTKVFLNFFVERK-----WDLR--LLFASGGMPSSHSALCTALTTS----VALCHGVADSLF 222 (262)
Q Consensus 164 liAw~vAQ~iKvii~~l~~rk-----~D~~--~lf~SGGMPSSHSA~VsALATa----IGl~eGf~SplF 222 (262)
..+.-+.|.+|=.+-+=+-+. +..+ .-.+. ||||||++-.+|++.. +-..+-...|.+
T Consensus 121 ~~~~Ylggc~KD~~~lPRP~sPPvvrltls~~~~~EY-G~PStHt~natais~~~~~~ls~~d~~s~p~~ 189 (407)
T KOG2822|consen 121 VLVMYLGGCIKDYWCLPRPSSPPVVRLTLSEDTTKEY-GMPSTHTMNATAISFYFFLVLSTMDRESYPIQ 189 (407)
T ss_pred HHHHHHhhhhhheeecCCCCCCCeEEEEeccchhhhh-CCCcchhhhhhHHHHHHHHHHHHhchhhhHHH
Confidence 445667888886554433221 2222 12234 6999999887777665 444455555533
No 31
>PF14378 PAP2_3: PAP2 superfamily
Probab=58.42 E-value=13 Score=31.21 Aligned_cols=47 Identities=19% Similarity=0.333 Sum_probs=27.4
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHHHHhhhcccchhhhh
Q 024830 195 GMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRH 242 (262)
Q Consensus 195 GMPSSHSA~VsALATaIGl~eGf~SplFAIA~VfAlIVMYDA~GVRRa 242 (262)
.|||-|.|...-.+..+.. .+-.--.+.+.++++++++.-....|.|
T Consensus 127 afPSlH~a~a~l~~~~~~~-~~~~~~~~~~~~~~~~~i~~stv~~~~H 173 (191)
T PF14378_consen 127 AFPSLHVAWAVLCALALWR-VGRPRWLRALFLAFNVLILFSTVYTGQH 173 (191)
T ss_pred ccCchHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 6999999985544444432 3333334456666666666554444443
No 32
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=56.20 E-value=10 Score=33.71 Aligned_cols=24 Identities=29% Similarity=0.261 Sum_probs=19.5
Q ss_pred hhcCCCCchhHHHHHHHHHHHHHH
Q 024830 191 FASGGMPSSHSALCTALTTSVALC 214 (262)
Q Consensus 191 f~SGGMPSSHSA~VsALATaIGl~ 214 (262)
-..+++||.|++...+.++.+...
T Consensus 147 ~~~~SfPSGHa~~a~a~a~~La~~ 170 (232)
T cd03397 147 AKDGSYPSGHTAAGYAWALILAEL 170 (232)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHH
Confidence 357899999999998888776544
No 33
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=50.73 E-value=1.5e+02 Score=26.23 Aligned_cols=26 Identities=23% Similarity=0.328 Sum_probs=22.1
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHhcC
Q 024830 192 ASGGMPSSHSALCTALTTSVALCHGV 217 (262)
Q Consensus 192 ~SGGMPSSHSA~VsALATaIGl~eGf 217 (262)
....+||.|++...|.++.+...-|-
T Consensus 143 ~~psyPSGHa~~a~a~a~vL~~~~~~ 168 (232)
T cd03398 143 PHPSYPSGHATFAGAAATVLKALFGS 168 (232)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHhCC
Confidence 45789999999999999998877664
No 34
>PLN02715 lipid phosphate phosphatase
Probab=50.29 E-value=48 Score=31.86 Aligned_cols=20 Identities=30% Similarity=0.338 Sum_probs=16.8
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 024830 194 GGMPSSHSALCTALTTSVAL 213 (262)
Q Consensus 194 GGMPSSHSA~VsALATaIGl 213 (262)
-.+||.||++..+..+.+++
T Consensus 185 ~SFPSGHSS~sfagl~~Lsl 204 (327)
T PLN02715 185 KSFPSGHTSWSFAGLTFLSL 204 (327)
T ss_pred CCCCchhHHHHHHHHHHHHH
Confidence 46999999999888887765
No 35
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=48.27 E-value=26 Score=31.70 Aligned_cols=64 Identities=13% Similarity=0.103 Sum_probs=44.1
Q ss_pred CccchhccccchhHHhhhcccccccccHHHHHHhcChhHHHHH----HHHHHHHHHHHHHHHHHhccc
Q 024830 122 NSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGL----FAWMIAQSTKVFLNFFVERKW 185 (262)
Q Consensus 122 ~~~~~~~~~~~g~~ll~~~~~a~~~ms~~l~~Ll~N~vLiaAl----iAw~vAQ~iKvii~~l~~rk~ 185 (262)
.+.+-...-|+|.+++.++.-|...+.-++...++++++++-+ +++++-++=..++.-.+..++
T Consensus 8 ~~~er~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~ 75 (301)
T PF14362_consen 8 SPAERNKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDG 75 (301)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 4555566678999999999999999999999999998544444 444444544555544444444
No 36
>PF09877 DUF2104: Predicted membrane protein (DUF2104); InterPro: IPR019211 This entry is found in various hypothetical archaeal proteins, has no known function.
Probab=44.78 E-value=65 Score=26.79 Aligned_cols=72 Identities=18% Similarity=0.216 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH------hcccchhhhh--hcCCC------CchhHHHHHH---HHHHHHHHhcCCCChhH
Q 024830 161 VSGLFAWMIAQSTKVFLNFFV------ERKWDLRLLF--ASGGM------PSSHSALCTA---LTTSVALCHGVADSLFP 223 (262)
Q Consensus 161 iaAliAw~vAQ~iKvii~~l~------~rk~D~~~lf--~SGGM------PSSHSA~VsA---LATaIGl~eGf~SplFA 223 (262)
..+++++++..++=....|-| +|+.|.-.+. --||+ ||+|=....+ ++..+|.+-|++.-+|.
T Consensus 6 li~~i~fiiGs~~GL~ySYkKy~~P~v~k~iD~~ALv~aiiG~~~~~vn~~~~~~~~~ig~~li~~~~GmRPGYGr~E~~ 85 (99)
T PF09877_consen 6 LIYIILFIIGSFLGLEYSYKKYREPFVEKKIDKLALVLAIIGGLILAVNSPSSPILYTIGAFLIGFPLGMRPGYGRIETV 85 (99)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhcccHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHhhhccCCCCCCeehhh
Confidence 344455555555444444443 4445555444 23554 5555444333 35567889999999999
Q ss_pred HHHHHHHhh
Q 024830 224 VCLGFSLIV 232 (262)
Q Consensus 224 IA~VfAlIV 232 (262)
+.+++|+++
T Consensus 86 iG~iiA~l~ 94 (99)
T PF09877_consen 86 IGLIIALLI 94 (99)
T ss_pred hhHHHHHHH
Confidence 999999876
No 37
>COG2246 Predicted membrane protein [Function unknown]
Probab=26.13 E-value=1.3e+02 Score=25.07 Aligned_cols=78 Identities=13% Similarity=0.275 Sum_probs=42.7
Q ss_pred hhccccchhHHhhhcccccccccHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhcCC-------CCc
Q 024830 126 YLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGG-------MPS 198 (262)
Q Consensus 126 ~~~~~~~g~~ll~~~~~a~~~ms~~l~~Ll~N~vLiaAliAw~vAQ~iKvii~~l~~rk~D~~~lf~SGG-------MPS 198 (262)
|.--|++|++.=-+ +--.+.+.++-+..++..+|+ .+=++.+|+.+|+|-++.- ++++ |-.
T Consensus 16 F~~VG~~~t~V~~~-------~~~ll~~~~~~~~~~A~~~a~----~~~ii~sf~~N~~wTF~~~-~~~~~~~~~~~~~~ 83 (139)
T COG2246 16 FAIVGGLGTLVDFA-------VLWLLVKALGVPYALANAIAY----EAAIIFSFVLNRRWTFRDR-STSRLHEFLRRLVK 83 (139)
T ss_pred HHhcchHHHHHHHH-------HHHHHHHhcccchHHHHHHHH----HHHHHHHHHHHceeeEeec-CCCcHHHHHHHHHH
Confidence 44556766654321 111233333444555555554 4557888888999988876 3332 334
Q ss_pred hhHHHHHHHHHHHHHHh
Q 024830 199 SHSALCTALTTSVALCH 215 (262)
Q Consensus 199 SHSA~VsALATaIGl~e 215 (262)
.|.+.+.++..-.+.-.
T Consensus 84 ~~~~~~lg~~~~~~~~~ 100 (139)
T COG2246 84 FNVAVLLGLAVLLLVLY 100 (139)
T ss_pred HHHHHHHhHHHHHHHHH
Confidence 55555555555554443
No 38
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=25.52 E-value=79 Score=25.29 Aligned_cols=78 Identities=14% Similarity=0.154 Sum_probs=42.9
Q ss_pred HHHHHHhcccchhhhh----hcCCC--CchhHHHHHHHHHHHHHHhcCCCChhHHHHHHHHhhhcccchhhhhhhhhhHH
Q 024830 176 FLNFFVERKWDLRLLF----ASGGM--PSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEV 249 (262)
Q Consensus 176 ii~~l~~rk~D~~~lf----~SGGM--PSSHSA~VsALATaIGl~eGf~SplFAIA~VfAlIVMYDA~GVRRaaGkQA~v 249 (262)
++..++.++.+.+... -+.++ =|----.+.-+|..+|+.+|.|- +|.+++++.+++++.-. ....+|.+-
T Consensus 19 ii~~vr~~~l~~~~~l~Wl~~~i~~l~~~ifP~~~~~vA~~lGi~~~~n~-lf~~~i~~ll~~~~~l~---~~is~le~~ 94 (115)
T PF10066_consen 19 IIRLVRKRKLRLKYSLLWLVFSIILLILSIFPNILDWVAKLLGIGRPPNL-LFYLGILFLLVIIFSLY---VRISRLEEK 94 (115)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHCCCchhHH-HHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 3445566666655432 22221 11122345567777788777555 56666666666655543 344556667
Q ss_pred HHHHHHHh
Q 024830 250 TNIVARAV 257 (262)
Q Consensus 250 LN~Lieel 257 (262)
+++|++++
T Consensus 95 i~~L~qei 102 (115)
T PF10066_consen 95 IKRLAQEI 102 (115)
T ss_pred HHHHHHHH
Confidence 77776665
No 39
>PRK11660 putative transporter; Provisional
Probab=25.00 E-value=1.3e+02 Score=29.96 Aligned_cols=61 Identities=11% Similarity=0.110 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhhh-----------hcCCCCchhHHHHHHHHHHHHHHhcCCCC
Q 024830 160 FVSGLFAWMIAQSTKVFLNFFVERKWDLRLLF-----------ASGGMPSSHSALCTALTTSVALCHGVADS 220 (262)
Q Consensus 160 LiaAliAw~vAQ~iKvii~~l~~rk~D~~~lf-----------~SGGMPSSHSA~VsALATaIGl~eGf~Sp 220 (262)
+..++++.+..-++.....-...++.|..+=+ -.||||.+++-.=+++....|-+.++++-
T Consensus 286 ~~iaiv~~iesl~~~~~~~~~~~~~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~srSa~n~~aGarT~la~i 357 (568)
T PRK11660 286 FSMAMLGAIESLLCAVVLDGMTGTKHSANSELVGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPISAV 357 (568)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHhHHHHHHHHhCcccccchHHHHHHHHhcCCCcHHHHH
Confidence 34455555444444444555566777776633 35999999876665555554444444443
No 40
>PF02714 DUF221: Domain of unknown function DUF221; InterPro: IPR003864 This domain is found in a family of hypothetical transmembrane proteins none of which have any known function, the aligned region is at 538 residues at maximum length.; GO: 0016020 membrane
Probab=23.55 E-value=3.6e+02 Score=24.16 Aligned_cols=78 Identities=9% Similarity=0.085 Sum_probs=55.0
Q ss_pred ChhHHHHH--HHHHHHHHHHHHHHHHHhccc-----chhhhh-hcCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 024830 157 NPTFVSGL--FAWMIAQSTKVFLNFFVERKW-----DLRLLF-ASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGF 228 (262)
Q Consensus 157 N~vLiaAl--iAw~vAQ~iKvii~~l~~rk~-----D~~~lf-~SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~Vf 228 (262)
|.++..++ .+.-+.|..+.++.+++.+.. |..... +...++-+..=...-+...+++.++.-+|+-.....+
T Consensus 196 ~~ii~~~~~~~~~~Ll~~~~l~~~~~~~~~~~~t~r~~~~~~~~~~~f~~~~~ya~~l~v~~i~l~ys~i~Plil~~~~~ 275 (325)
T PF02714_consen 196 NYIILQAFIGSPLELLRPPPLIIYYIRRKFFSKTPRELNELYTEPPPFDYGYQYAQMLLVFFIGLFYSPIAPLILPFGLV 275 (325)
T ss_pred HHHHHhcchhhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 44444433 345577888888777775533 233334 6677777777777888999999999999988877777
Q ss_pred HHhhhc
Q 024830 229 SLIVMY 234 (262)
Q Consensus 229 AlIVMY 234 (262)
.+.+.|
T Consensus 276 yf~l~y 281 (325)
T PF02714_consen 276 YFLLKY 281 (325)
T ss_pred HHHHHH
Confidence 777664
No 41
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=22.04 E-value=1.1e+02 Score=26.71 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=23.0
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhcCCCChhHHHH
Q 024830 193 SGGMPSSHSALCTALTTSVALCHGVADSLFPVCL 226 (262)
Q Consensus 193 SGGMPSSHSA~VsALATaIGl~eGf~SplFAIA~ 226 (262)
.||||.++|-.=+++....|-+..+++-+-++.+
T Consensus 198 ~gg~p~~~s~srs~~~~~~Ga~t~~s~~~~~~~~ 231 (280)
T PF00916_consen 198 FGGMPGSGSFSRSAVNYRAGARTRLSGLISALFV 231 (280)
T ss_pred hcccccccccccchHHHhcCcceeehhHHHHHHH
Confidence 5899999998777776666666555554444433
No 42
>PF12430 ABA_GPCR: Abscisic acid G-protein coupled receptor
Probab=21.95 E-value=1.7e+02 Score=25.75 Aligned_cols=94 Identities=16% Similarity=0.324 Sum_probs=53.5
Q ss_pred hhHHhhhcccccccccHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhcCCCCchhHHHHHHHH----
Q 024830 133 GAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALT---- 208 (262)
Q Consensus 133 g~~ll~~~~~a~~~ms~~l~~Ll~N~vLiaAliAw~vAQ~iKvii~~l~~rk~D~~~lf~SGGMPSSHSA~VsALA---- 208 (262)
|+.+++..-..-..+..++..+-...-.-+.++.-++||+.=+-+ . .--.+..+ -+|..++..+..+-
T Consensus 92 g~l~~~S~r~vl~t~~~~~~~~~~~~~~~~~~~~L~laelmGiY~---i----St~lLlRs-nLP~~~~~~i~~~Lg~~~ 163 (196)
T PF12430_consen 92 GVLFVTSIRGVLTTFSKFFRALPSSLSLSSNILVLFLAELMGIYF---I----STVLLLRS-NLPPEYSSIITEILGENS 163 (196)
T ss_pred HHHHHHhHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHH---H----HHHHHHhc-cCCHHHHHHHHHHHcccc
Confidence 444444322222233333333333333334477777888764322 1 11112333 38999988877642
Q ss_pred -HHHHHHhcCCCChhHHHHHHHHhhhc
Q 024830 209 -TSVALCHGVADSLFPVCLGFSLIVMY 234 (262)
Q Consensus 209 -TaIGl~eGf~SplFAIA~VfAlIVMY 234 (262)
.-..+.+.|-+-+|++++++.++++|
T Consensus 164 ~~~~~~~~~wFD~iFl~S~~~T~~~i~ 190 (196)
T PF12430_consen 164 LLEFNFYDRWFDKIFLISAILTAVGIY 190 (196)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 22446777888999999999999886
No 43
>PRK13841 conjugal transfer protein TrbL; Provisional
Probab=21.58 E-value=8.5e+02 Score=24.62 Aligned_cols=111 Identities=17% Similarity=0.300 Sum_probs=60.0
Q ss_pred ecchhhHHHHHHhhchhhhhhccccccCccchhccccchhHHhhhcc------cccccccHHHHHHhcChhHHHHHHHHH
Q 024830 95 ASSQTKKWASRLQAHSSQLENINVIDQNSNDYLQTGAFGAALLSVTS------TAKVKISPFVATLAANPTFVSGLFAWM 168 (262)
Q Consensus 95 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ll~~~~------~a~~~ms~~l~~Ll~N~vLiaAliAw~ 168 (262)
...+++.|...++.|-..+=-. .+.++.+- -.+....+++.++. .+++..+++.|+
T Consensus 37 f~~aas~W~~~i~~~A~~LFw~-----------------La~I~~t~a~vw~Al~~ad~~d~~AeLv-RkiL~iGFF~wI 98 (391)
T PRK13841 37 VVTAAKGWETTVMNAARSLFWI-----------------LAGIEIGIAAVWLAIQAASLDSWFAELV-RRIMFIGFFAFI 98 (391)
T ss_pred HHHHHhhhHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHcccchhhHHHHHH-HHHHHHHHHHHH
Confidence 3456778999988887653211 11122111 12445677888775 589999999999
Q ss_pred HHHH---HHHHHHHHHhcccchhhhhhcCCCCchhHHHHHH---HHHHHHHHh---cCCCChhHHHHHHHHh
Q 024830 169 IAQS---TKVFLNFFVERKWDLRLLFASGGMPSSHSALCTA---LTTSVALCH---GVADSLFPVCLGFSLI 231 (262)
Q Consensus 169 vAQ~---iKvii~~l~~rk~D~~~lf~SGGMPSSHSA~VsA---LATaIGl~e---Gf~SplFAIA~VfAlI 231 (262)
+-+. .+.+++-++ .+=. ||-.-|.|..+.. +...+.-.- .|.....+|.++++.+
T Consensus 99 L~N~~~~A~aIi~Sf~-------~lGA-~g~~lSPs~i~d~G~~I~~~i~d~~~~~~~~~n~~~I~i~lA~l 162 (391)
T PRK13841 99 LDQGPTFAKAVVDSLF-------QIGA-GGGSASPANVFDAGIRVASKMSEQAKFGLFEDNALAIAAVFAMV 162 (391)
T ss_pred HHccHHHHHHHHHHHH-------HHhc-CCCCCChHHHHHHHHHHHHHHHHhcCcccccccHHHHHHHHHHH
Confidence 9764 555555433 3223 4444455555432 233333222 3334444555555443
No 44
>TIGR00697 conserved hypothetical integral membrane protein. All known members of this family are proteins or 210-250 amino acids in length. Conserved regions of hydrophobicity suggest that all members of the family are integral membrane proteins.
Probab=20.36 E-value=1.9e+02 Score=25.60 Aligned_cols=37 Identities=19% Similarity=0.318 Sum_probs=28.7
Q ss_pred ccHHHHHHhcC--hhHHHHHHHHHHHHHHHHH-HHHHHhc
Q 024830 147 ISPFVATLAAN--PTFVSGLFAWMIAQSTKVF-LNFFVER 183 (262)
Q Consensus 147 ms~~l~~Ll~N--~vLiaAliAw~vAQ~iKvi-i~~l~~r 183 (262)
..+-++.++.+ ++.+++++|.+++|++-+- .+++|.+
T Consensus 90 ~~~af~~vf~~~~ri~~aS~~Aylisq~~dv~if~~lK~~ 129 (202)
T TIGR00697 90 SQTHFEALFSSSPRIALASLVAYIVSQLLDVKVFTFLKKR 129 (202)
T ss_pred hHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34557778877 8899999999999999954 4555654
No 45
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=20.30 E-value=1.6e+02 Score=29.27 Aligned_cols=65 Identities=11% Similarity=0.070 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHHHHH-HHHHHHHHHhcccchhhhh-----------hcCCCCchhHHHHHHHHHHHHHHhcCCCChhH
Q 024830 158 PTFVSGLFAWMIAQS-TKVFLNFFVERKWDLRLLF-----------ASGGMPSSHSALCTALTTSVALCHGVADSLFP 223 (262)
Q Consensus 158 ~vLiaAliAw~vAQ~-iKvii~~l~~rk~D~~~lf-----------~SGGMPSSHSA~VsALATaIGl~eGf~SplFA 223 (262)
..+..++++.+-.-. .|.+- -..+.++|..+=+ --||||.+||..=+++....|-+..+.+-+.+
T Consensus 264 ~a~~ia~v~~~e~l~~a~~~~-~~~~~~~d~n~El~a~G~~N~~~~~fg~~p~~~s~srs~~~~~~G~~t~~a~i~~~ 340 (563)
T TIGR00815 264 DAIAIAIVGLIESIAIARSFA-RMTGYKIDANQELVAQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTA 340 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCcHHHHHhhHHHHHHHHhCccCCCCcchHHHHHHhcCCcchHHHHHHH
Confidence 334455555444433 33332 2345567777633 35899999998776666555555555553333
No 46
>KOG4491 consensus Predicted membrane protein [Function unknown]
Probab=20.05 E-value=1.7e+02 Score=28.37 Aligned_cols=61 Identities=20% Similarity=0.390 Sum_probs=39.6
Q ss_pred hhccccchhHHhhhcccccccccHHHHHHhcChhHHHHHHHHHHHH---------HHHH-HHHHHHh-cccchhhhhhcC
Q 024830 126 YLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQ---------STKV-FLNFFVE-RKWDLRLLFASG 194 (262)
Q Consensus 126 ~~~~~~~g~~ll~~~~~a~~~ms~~l~~Ll~N~vLiaAliAw~vAQ---------~iKv-ii~~l~~-rk~D~~~lf~SG 194 (262)
+-+.||+|-.|.. |+. -..|+.+.++++-+|.+. ..|- ...|.++ +.-+|-+.+-.|
T Consensus 62 ld~SGa~~G~lV~-----------fil-tIa~h~ff~sl~~fF~sss~~tkfr~~~k~r~~s~~~eg~GQRNWvQVlCNg 129 (323)
T KOG4491|consen 62 LDHSGALGGLLVG-----------FIL-TIANHSFFTSLLMFFLSSSKLTKFRGEVKKRLDSEYKEGLGQRNWVQVLCNG 129 (323)
T ss_pred cccccchhHHHHH-----------HHH-HHhcchhHHHHHHHHHccchhhhHHHHHHHHHHHHHhhccCccchhhhhcCC
Confidence 3456666655543 332 235778888888888775 3333 3334443 577999999999
Q ss_pred CCCc
Q 024830 195 GMPS 198 (262)
Q Consensus 195 GMPS 198 (262)
|||+
T Consensus 130 gva~ 133 (323)
T KOG4491|consen 130 GVAT 133 (323)
T ss_pred cchH
Confidence 9986
Done!