Query 024831
Match_columns 262
No_of_seqs 232 out of 1771
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 15:09:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024831.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024831hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q2g_A HSP40 protein, heat sho 100.0 5.3E-52 1.8E-56 350.4 23.8 178 84-262 2-180 (180)
2 3agx_A DNAJ homolog subfamily 100.0 1.3E-50 4.6E-55 342.1 23.7 178 85-262 2-180 (181)
3 1c3g_A Heat shock protein 40; 100.0 1.6E-48 5.5E-53 326.3 18.3 169 86-258 1-170 (170)
4 3lz8_A Putative chaperone DNAJ 100.0 8.2E-48 2.8E-52 352.1 23.2 175 82-260 137-313 (329)
5 1nlt_A Protein YDJ1, mitochond 100.0 1.4E-47 4.8E-52 338.4 21.2 178 80-258 6-248 (248)
6 3i38_A Putative chaperone DNAJ 100.0 1.6E-28 5.4E-33 190.8 11.4 93 165-261 2-94 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 1.5E-27 5E-32 188.7 12.8 93 169-262 1-97 (121)
8 3i38_A Putative chaperone DNAJ 99.3 2.8E-12 9.5E-17 99.0 5.5 79 82-174 8-86 (109)
9 1xao_A YDJ1, mitochondrial pro 99.2 2.2E-11 7.4E-16 95.7 6.4 82 83-176 4-90 (121)
10 3agx_A DNAJ homolog subfamily 98.9 1.6E-09 5.6E-14 90.6 6.7 79 82-172 89-169 (181)
11 1c3g_A Heat shock protein 40; 98.9 1.4E-09 4.9E-14 90.1 5.9 78 82-171 83-162 (170)
12 2q2g_A HSP40 protein, heat sho 98.9 2.2E-09 7.6E-14 89.7 6.8 79 82-172 89-169 (180)
13 1nlt_A Protein YDJ1, mitochond 98.9 3.4E-09 1.2E-13 92.9 7.0 83 82-176 158-245 (248)
14 3lz8_A Putative chaperone DNAJ 98.7 9.8E-09 3.3E-13 93.5 5.5 77 82-172 228-304 (329)
15 2ctt_A DNAJ homolog subfamily 96.7 6.8E-05 2.3E-09 56.7 -3.1 32 85-116 1-32 (104)
16 1msz_A DNA-binding protein smu 34.3 19 0.00065 25.8 1.9 19 242-260 35-53 (86)
17 2xzz_A Protein-glutamine gamma 21.7 2.3E+02 0.0078 20.4 6.9 64 174-242 19-86 (102)
18 2dgy_A MGC11102 protein; EIF-1 21.3 2.4E+02 0.0083 20.8 6.1 61 187-259 23-89 (111)
19 1sif_A Ubiquitin; hydrophobic 21.3 73 0.0025 21.9 3.1 23 188-210 6-28 (88)
No 1
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.3e-52 Score=350.39 Aligned_cols=178 Identities=40% Similarity=0.722 Sum_probs=168.6
Q ss_pred CCCCEEEEEecchhhhccCceEEEEeeEEEEeCCCCcccccEEEEEEeCCCCCCCceEEeCccccC-CCCCCCCcEEEEE
Q 024831 84 KAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFII 162 (262)
Q Consensus 84 ~g~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~gDlv~~i 162 (262)
+++|++++|+|||||||+||+++++++|++.|++| ++.+.++++|+|||||++|++|+|+|+|++ .+++.+|||+|+|
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g-~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i 80 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHK-VRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLII 80 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTE-EEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEE
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCc-eEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEE
Confidence 36799999999999999999999999999999886 577889999999999999999999999999 5888999999999
Q ss_pred EeeCCCCeeeeccceEEEEEecHHHHhCCCEEEEecCCCcEEEEeeCCccCCCcEEEEcCCCCCCCCCCCCCCCEEEEEE
Q 024831 163 DEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFN 242 (262)
Q Consensus 163 ~~~~h~~f~R~G~DL~~~~~I~l~~Al~G~~i~i~tldG~~l~v~i~~~~~~g~~~~i~g~GmP~~~~~~~rGDL~V~~~ 242 (262)
++++|+.|+|+|+||+++++|+|++||+|++++|+||||+.+.|++|++++||++++|+|+|||..++++.+|||||+|+
T Consensus 81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~ 160 (180)
T 2q2g_A 81 QTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFD 160 (180)
T ss_dssp EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEE
T ss_pred EEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence 99999999999999999999999999999999999999998999999999999999999999998776678999999999
Q ss_pred EeCCCCCCHHHHHHHHhhCC
Q 024831 243 IKFPSKLTTEQKSGLKRLIP 262 (262)
Q Consensus 243 V~~P~~ls~~qk~~l~~~l~ 262 (262)
|+||++||++||++|+++||
T Consensus 161 V~~P~~Ls~~q~~~l~~~~p 180 (180)
T 2q2g_A 161 ICFPKSLTPEQKKLIKEALD 180 (180)
T ss_dssp EECCSCCCHHHHHHHHHHC-
T ss_pred EECCCCCCHHHHHHHHHhcC
Confidence 99999999999999999986
No 2
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=1.3e-50 Score=342.10 Aligned_cols=178 Identities=46% Similarity=0.891 Sum_probs=164.0
Q ss_pred CCCEEEEEecchhhhccCceEEEEeeEEEEeCCCC-cccccEEEEEEeCCCCCCCceEEeCccccCCCCCCCCcEEEEEE
Q 024831 85 AAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGR-PNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIID 163 (262)
Q Consensus 85 g~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~-~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~gDlv~~i~ 163 (262)
++|++++|+|||||||+||++++++++.+....|+ ++.++++++|+|||||++|++|+|+|+|++.+++.+|||+|+|+
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~ 81 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK 81 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEE
Confidence 46899999999999999999999999876543442 56788999999999999999999999999998889999999999
Q ss_pred eeCCCCeeeeccceEEEEEecHHHHhCCCEEEEecCCCcEEEEeeCCccCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEE
Q 024831 164 EKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNI 243 (262)
Q Consensus 164 ~~~h~~f~R~G~DL~~~~~I~l~~Al~G~~i~i~tldG~~l~v~i~~~~~~g~~~~i~g~GmP~~~~~~~rGDL~V~~~V 243 (262)
+++|+.|+|+|+||+++++|+|++||+|++++|+||||+.+.|++|++++||++++|+|+|||..++++.+|||||+|+|
T Consensus 82 ~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V 161 (181)
T 3agx_A 82 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEV 161 (181)
T ss_dssp ECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEE
T ss_pred EeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEE
Confidence 99999999999999999999999999999999999999989999999999999999999999987656789999999999
Q ss_pred eCCCCCCHHHHHHHHhhCC
Q 024831 244 KFPSKLTTEQKSGLKRLIP 262 (262)
Q Consensus 244 ~~P~~ls~~qk~~l~~~l~ 262 (262)
+||++||++|+++|+++||
T Consensus 162 ~~P~~ls~~q~~~l~~~~~ 180 (181)
T 3agx_A 162 IFPERIPQTSRTVLEQVLP 180 (181)
T ss_dssp ECCSCCCHHHHHHHHHHSC
T ss_pred ECCCCCCHHHHHHHHHhcc
Confidence 9999999999999999986
No 3
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=1.6e-48 Score=326.32 Aligned_cols=169 Identities=40% Similarity=0.733 Sum_probs=158.7
Q ss_pred CCEEEEEecchhhhccCceEEEEeeEEEEeCCCCcccccEEEEEEeCCCCCCCceEEeCccccCC-CCCCCCcEEEEEEe
Q 024831 86 APIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNEL-RNVIPSDLIFIIDE 164 (262)
Q Consensus 86 ~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~gDlv~~i~~ 164 (262)
+|++++|+|||||||+||++++++.|+ +.+|+ + +.++++|+|||||++|++|+|+|+|++. +++.+|||+|+|++
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~--~~~G~-~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v 76 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRK--GPHGA-S-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE 76 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEE--ETTTE-E-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEe--cCCCc-E-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEE
Confidence 489999999999999999999999987 45674 3 7889999999999999999999999954 78889999999999
Q ss_pred eCCCCeeeeccceEEEEEecHHHHhCCCEEEEecCCCcEEEEeeCCccCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEe
Q 024831 165 KPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK 244 (262)
Q Consensus 165 ~~h~~f~R~G~DL~~~~~I~l~~Al~G~~i~i~tldG~~l~v~i~~~~~~g~~~~i~g~GmP~~~~~~~rGDL~V~~~V~ 244 (262)
++|+.|+|+|+||+++++|+|++||+|++++|+||||+.++|++|++++||++++|+|+|||..++++.+|||||+|+|+
T Consensus 77 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~ 156 (170)
T 1c3g_A 77 KSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD 156 (170)
T ss_dssp CCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCB
T ss_pred ccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEE
Confidence 99999999999999999999999999999999999998899999999999999999999999876666899999999999
Q ss_pred CCCCCCHHHHHHHH
Q 024831 245 FPSKLTTEQKSGLK 258 (262)
Q Consensus 245 ~P~~ls~~qk~~l~ 258 (262)
||++||++||++|+
T Consensus 157 ~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 157 YPISLNDAQKRAID 170 (170)
T ss_dssp CCSSCCTTHHHHTC
T ss_pred CCCCCCHHHHHhhC
Confidence 99999999999874
No 4
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=8.2e-48 Score=352.14 Aligned_cols=175 Identities=21% Similarity=0.306 Sum_probs=162.9
Q ss_pred CCCCCCEEEEEecchhhhccCceEEEEeeEEEEeCCCCcccc-cEEEEEEeCCCCCCCceEEeCccccCCC-CCCCCcEE
Q 024831 82 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTT-EEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLI 159 (262)
Q Consensus 82 ~~~g~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~~~~~-~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~gDlv 159 (262)
+++++|++++|+|||+|+|+||+++|.+++.++|+.|+++.+ .++++|+|||||++|++|+|+|+|++.+ +..+|||+
T Consensus 137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~ 216 (329)
T 3lz8_A 137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLW 216 (329)
T ss_dssp CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEE
T ss_pred cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEE
Confidence 567899999999999999999999999999999998865433 6789999999999999999999999884 67899999
Q ss_pred EEEEeeCCCCeeeeccceEEEEEecHHHHhCCCEEEEecCCCcEEEEeeCCccCCCcEEEEcCCCCCCCCCCCCCCCEEE
Q 024831 160 FIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRI 239 (262)
Q Consensus 160 ~~i~~~~h~~f~R~G~DL~~~~~I~l~~Al~G~~i~i~tldG~~l~v~i~~~~~~g~~~~i~g~GmP~~~~~~~rGDL~V 239 (262)
|+|++++|+.|+|+|+||+++++|+|++||||++++|+||||+ +.|+||++++||+++||+|+|||.. ..||||||
T Consensus 217 v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~---~~rGDL~v 292 (329)
T 3lz8_A 217 LVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFA 292 (329)
T ss_dssp EEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEE
T ss_pred EEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC---CCCCCEEE
Confidence 9999999999999999999999999999999999999999998 7999999999999999999999965 47999999
Q ss_pred EEEEeCCCCCCHHHHHHHHhh
Q 024831 240 KFNIKFPSKLTTEQKSGLKRL 260 (262)
Q Consensus 240 ~~~V~~P~~ls~~qk~~l~~~ 260 (262)
+|+|+||++||++||++|+++
T Consensus 293 ~~~V~~P~~l~~~q~~~l~~~ 313 (329)
T 3lz8_A 293 VIKIVMPTKPDEKARELWQQL 313 (329)
T ss_dssp EEEECCCSSCCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 999999999999999999986
No 5
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=1.4e-47 Score=338.37 Aligned_cols=178 Identities=38% Similarity=0.665 Sum_probs=152.6
Q ss_pred CcCCCCCCEEEEEecchhhhccCceEEEEeeEEEEeC----CC----------------C--------------------
Q 024831 80 NALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDA----SG----------------R-------------------- 119 (262)
Q Consensus 80 ~~~~~g~di~~~l~itLee~~~G~~k~i~~~r~~~~~----~G----------------~-------------------- 119 (262)
+++++++|++++|+|||||||+|++|+|++.|.+.|. +| +
T Consensus 6 ~~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~ 85 (248)
T 1nlt_A 6 RGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDV 85 (248)
T ss_dssp --CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTT
T ss_pred CCCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCC
Confidence 3456899999999999999999999999999998862 22 0
Q ss_pred ---------------------cccccEEEEEEeCCCCCCCceEEeCccccCCCCCCCCcEEEEEEeeCCCCeeeeccceE
Q 024831 120 ---------------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLV 178 (262)
Q Consensus 120 ---------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~gDlv~~i~~~~h~~f~R~G~DL~ 178 (262)
++.++++++|+|||||++|++|+|+|+|++.++..+|||+|+|++++|+.|+|+|+||+
T Consensus 86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEE
Confidence 23456899999999999999999999999988889999999999999999999999999
Q ss_pred EEEEecHHHHhCCCEEEEecCCCcEEEEeeCCc--cCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEeCCCC--CCHHHH
Q 024831 179 VTQKISLVEALTGYTVQLTTLDGRTLTVPINSV--ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSK--LTTEQK 254 (262)
Q Consensus 179 ~~~~I~l~~Al~G~~i~i~tldG~~l~v~i~~~--~~~g~~~~i~g~GmP~~~~~~~rGDL~V~~~V~~P~~--ls~~qk 254 (262)
++++|+|++||+|++++|+||||+.+.|+||+. ++||++++|+|+|||..+++ .+|||||+|+|+||++ ||++||
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~ 244 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL 244 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence 999999999999999999999998899999976 99999999999999987655 7899999999999999 999999
Q ss_pred HHHH
Q 024831 255 SGLK 258 (262)
Q Consensus 255 ~~l~ 258 (262)
++|+
T Consensus 245 ~~l~ 248 (248)
T 1nlt_A 245 KKLE 248 (248)
T ss_dssp ----
T ss_pred HhhC
Confidence 9885
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.95 E-value=1.6e-28 Score=190.79 Aligned_cols=93 Identities=24% Similarity=0.334 Sum_probs=87.2
Q ss_pred eCCCCeeeeccceEEEEEecHHHHhCCCEEEEecCCCcEEEEeeCCccCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEe
Q 024831 165 KPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK 244 (262)
Q Consensus 165 ~~h~~f~R~G~DL~~~~~I~l~~Al~G~~i~i~tldG~~l~v~i~~~~~~g~~~~i~g~GmP~~~~~~~rGDL~V~~~V~ 244 (262)
++|+.|+|+|+||+++++|+|.+|++|++++|+||||+ +.|+||+++++|++++|+|+|||. . +.+|||||+|+|+
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g~~~G~~~rl~G~G~p~-~--~~~GDL~v~~~V~ 77 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVS-K--THTGDLFAVIKIV 77 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBC-S--SCBCCEEEEEEEC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCCcCcCeEEEECCccCCC-C--CCCcCEEEEEEEE
Confidence 68999999999999999999999999999999999995 999999999999999999999997 3 3799999999999
Q ss_pred CCCCCCHHHHHHHHhhC
Q 024831 245 FPSKLTTEQKSGLKRLI 261 (262)
Q Consensus 245 ~P~~ls~~qk~~l~~~l 261 (262)
||++||++|+++|++++
T Consensus 78 ~P~~Ls~~q~~~l~~l~ 94 (109)
T 3i38_A 78 MPTKPDEKARELWQQLA 94 (109)
T ss_dssp CCSSCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 99999999999999875
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.5e-27 Score=188.66 Aligned_cols=93 Identities=44% Similarity=0.700 Sum_probs=84.1
Q ss_pred CeeeeccceEEEEEecHHHHhCCCEEEEecCCCcEEEEeeCCc--cCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEeCC
Q 024831 169 LFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSV--ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFP 246 (262)
Q Consensus 169 ~f~R~G~DL~~~~~I~l~~Al~G~~i~i~tldG~~l~v~i~~~--~~~g~~~~i~g~GmP~~~~~~~rGDL~V~~~V~~P 246 (262)
.|+|+|+||+++++|+|++||||++++|+||||+.+.|+||++ ++||++++|+|+|||..+++ .+|||||+|+|+||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4999999999999999999999999999999999899999976 99999999999999987655 78999999999999
Q ss_pred CC--CCHHHHHHHHhhCC
Q 024831 247 SK--LTTEQKSGLKRLIP 262 (262)
Q Consensus 247 ~~--ls~~qk~~l~~~l~ 262 (262)
++ ||++|+++|+++++
T Consensus 80 ~~~~ls~~q~~~l~~l~~ 97 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILP 97 (121)
T ss_dssp CTTCSCHHHHHHHHHHSC
T ss_pred CCCCCCHHHHHHHHHHcc
Confidence 99 99999999999985
No 8
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.28 E-value=2.8e-12 Score=99.05 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=67.4
Q ss_pred CCCCCCEEEEEecchhhhccCceEEEEeeEEEEeCCCCcccccEEEEEEeCCCCCCCceEEeCccccCCCCCCCCcEEEE
Q 024831 82 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI 161 (262)
Q Consensus 82 ~~~g~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~gDlv~~ 161 (262)
.+++.|++++++|||.||+.|++++|... +| .++|+||+|+++|++++++|+|.+..+ .+|||+|+
T Consensus 8 ~R~G~DL~~~~~Isl~eAl~G~~i~v~tl------dG-------~~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~ 73 (109)
T 3i38_A 8 DIVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAV 73 (109)
T ss_dssp EEETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEE
T ss_pred EEECCEEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEE
Confidence 46789999999999999999999888664 45 589999999999999999999998754 78999999
Q ss_pred EEeeCCCCeeeec
Q 024831 162 IDEKPHSLFKRDG 174 (262)
Q Consensus 162 i~~~~h~~f~R~G 174 (262)
|++.-......+.
T Consensus 74 ~~V~~P~~Ls~~q 86 (109)
T 3i38_A 74 IKIVMPTKPDEKA 86 (109)
T ss_dssp EEECCCSSCCHHH
T ss_pred EEEECCCCCCHHH
Confidence 9998666554443
No 9
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.19 E-value=2.2e-11 Score=95.72 Aligned_cols=82 Identities=18% Similarity=0.161 Sum_probs=66.2
Q ss_pred CCCCCEEEEEecchhhhccCceEEEEeeEEEEeCCCCcccccEEEEEEeCCC--CCCCceEEeCccccCCCCC-CCCcEE
Q 024831 83 RKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPG--WKKGTKITFPEKGNELRNV-IPSDLI 159 (262)
Q Consensus 83 ~~g~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~gDlv 159 (262)
|++.|++++++|||.||+.|++++|... +|+ .++|+||+| +++|++++++|+|.+..+. .+|||+
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~ 71 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI 71 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT------TSC------EEEEEECTTSCCCTTCEEEETTCSCC------CCCEE
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC------CCC------EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEE
Confidence 5689999999999999999999888654 663 789999999 9999999999999986433 689999
Q ss_pred EEEEeeCCCC--eeeeccc
Q 024831 160 FIIDEKPHSL--FKRDGND 176 (262)
Q Consensus 160 ~~i~~~~h~~--f~R~G~D 176 (262)
|++++.-... +..+..+
T Consensus 72 V~~~V~~P~~~~ls~~q~~ 90 (121)
T 1xao_A 72 IKFTIKFPENHFTSEENLK 90 (121)
T ss_dssp EEEEEECCCTTCSCHHHHH
T ss_pred EEEEEECCCCCCCCHHHHH
Confidence 9999987665 5544433
No 10
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.91 E-value=1.6e-09 Score=90.62 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=67.2
Q ss_pred CCCCCCEEEEEecchhhhccCceEEEEeeEEEEeCCCCcccccEEEEEEeCCCCCCCceEEeCccccCCCC--CCCCcEE
Q 024831 82 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN--VIPSDLI 159 (262)
Q Consensus 82 ~~~g~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~gDlv 159 (262)
.+++.|++++++|||.||+.|++++|... +|+ .++|.||+++++|++++++|+|.+..+ ..+|||+
T Consensus 89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~ 156 (181)
T 3agx_A 89 KRDGSDVIYPARISLREALCGCTVNVPTL------DGR------TIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLI 156 (181)
T ss_dssp EEETTEEEEEEEEEHHHHHHCEEEEEECT------TSC------EEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEE
T ss_pred eeeCCcEEEEEEcCHHHHhCCCEEEeECC------CCC------EEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEE
Confidence 46799999999999999999999888765 663 789999999999999999999998643 4579999
Q ss_pred EEEEeeCCCCeee
Q 024831 160 FIIDEKPHSLFKR 172 (262)
Q Consensus 160 ~~i~~~~h~~f~R 172 (262)
|++++.-......
T Consensus 157 V~~~V~~P~~ls~ 169 (181)
T 3agx_A 157 IEFEVIFPERIPQ 169 (181)
T ss_dssp EEEEEECCSCCCH
T ss_pred EEEEEECCCCCCH
Confidence 9999986654443
No 11
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.90 E-value=1.4e-09 Score=90.06 Aligned_cols=78 Identities=19% Similarity=0.232 Sum_probs=66.5
Q ss_pred CCCCCCEEEEEecchhhhccCceEEEEeeEEEEeCCCCcccccEEEEEEeCCCCCCCceEEeCccccCCCC--CCCCcEE
Q 024831 82 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN--VIPSDLI 159 (262)
Q Consensus 82 ~~~g~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~gDlv 159 (262)
.+++.|++++++|||.||++|++++|... +|+ .++|.||+++++|++++++|+|.+..+ ..+|||+
T Consensus 83 ~R~G~DL~~~~~Isl~eAllG~~~~v~tl------dG~------~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~ 150 (170)
T 1c3g_A 83 KRDGDDLIYTLPLSFKESLLGFSKTIQTI------DGR------TLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLI 150 (170)
T ss_dssp EEETTEEEEEECCBHHHHHHCEEEEEECS------SSC------EEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEE
T ss_pred EEeCCcEeEEEEcCHHHHhCCCeEEeeCC------CCC------EEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEE
Confidence 46799999999999999999999988765 563 689999999999999999999998642 3579999
Q ss_pred EEEEeeCCCCee
Q 024831 160 FIIDEKPHSLFK 171 (262)
Q Consensus 160 ~~i~~~~h~~f~ 171 (262)
|++++.-.....
T Consensus 151 V~~~V~~P~~Ls 162 (170)
T 1c3g_A 151 VKYKVDYPISLN 162 (170)
T ss_dssp EEECCBCCSSCC
T ss_pred EEEEEECCCCCC
Confidence 999998655444
No 12
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.89 E-value=2.2e-09 Score=89.72 Aligned_cols=79 Identities=22% Similarity=0.177 Sum_probs=67.1
Q ss_pred CCCCCCEEEEEecchhhhccCceEEEEeeEEEEeCCCCcccccEEEEEEeCCCCCCCceEEeCccccCCCC--CCCCcEE
Q 024831 82 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN--VIPSDLI 159 (262)
Q Consensus 82 ~~~g~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~gDlv 159 (262)
.+++.||+++++|||.||+.|++++|... +|+ .++|.||+++++|++++++|+|.+..+ ..+|||+
T Consensus 89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~ 156 (180)
T 2q2g_A 89 TRDDCHLIMKVTIPLVRALTGFTCPVTTL------DNR------NLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLI 156 (180)
T ss_dssp EEETTEEEEEEEEEHHHHHHCEEEEEECT------TCC------EEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEE
T ss_pred EEcCCEEEEEEEcCHHHHhCCCEEEeeCC------CCC------EEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEE
Confidence 46799999999999999999999888765 663 789999999999999999999998642 4579999
Q ss_pred EEEEeeCCCCeee
Q 024831 160 FIIDEKPHSLFKR 172 (262)
Q Consensus 160 ~~i~~~~h~~f~R 172 (262)
|++++.-......
T Consensus 157 V~~~V~~P~~Ls~ 169 (180)
T 2q2g_A 157 LEFDICFPKSLTP 169 (180)
T ss_dssp EEEEEECCSCCCH
T ss_pred EEEEEECCCCCCH
Confidence 9999986654443
No 13
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=98.85 E-value=3.4e-09 Score=92.92 Aligned_cols=83 Identities=18% Similarity=0.163 Sum_probs=65.4
Q ss_pred CCCCCCEEEEEecchhhhccCceEEEEeeEEEEeCCCCcccccEEEEEEeCCC--CCCCceEEeCccccCCCCC-CCCcE
Q 024831 82 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPG--WKKGTKITFPEKGNELRNV-IPSDL 158 (262)
Q Consensus 82 ~~~g~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~gDl 158 (262)
.|++.||+++++|||.||+.|++++|... +|+ .++|+||+| +++|++++++|+|.+.... ..|||
T Consensus 158 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL 225 (248)
T 1nlt_A 158 KRDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNL 225 (248)
T ss_dssp EEETTEEEEEEEEEHHHHHHCBCCEEECS------SSC------EEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCE
T ss_pred eeeCCEEEEEEEeCHHHHhcCCEEEEeCC------CCC------EEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCE
Confidence 46799999999999999999999888765 563 789999999 9999999999999986432 57999
Q ss_pred EEEEEeeCCCC--eeeeccc
Q 024831 159 IFIIDEKPHSL--FKRDGND 176 (262)
Q Consensus 159 v~~i~~~~h~~--f~R~G~D 176 (262)
+|+|++.-... +..+...
T Consensus 226 ~V~~~V~~P~~~~Ls~~q~~ 245 (248)
T 1nlt_A 226 IIKFTIKDPENHFTSEENLK 245 (248)
T ss_dssp EEEEEEECCC----------
T ss_pred EEEEEEECCCCCCCCHHHHH
Confidence 99999986654 4444433
No 14
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.71 E-value=9.8e-09 Score=93.51 Aligned_cols=77 Identities=16% Similarity=0.156 Sum_probs=65.9
Q ss_pred CCCCCCEEEEEecchhhhccCceEEEEeeEEEEeCCCCcccccEEEEEEeCCCCCCCceEEeCccccCCCCCCCCcEEEE
Q 024831 82 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI 161 (262)
Q Consensus 82 ~~~g~di~~~l~itLee~~~G~~k~i~~~r~~~~~~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~gDlv~~ 161 (262)
.+++.||+++++|||.||.+|++++|... +| .++|+||+|+++|++++++|+|.+.. ..+|||+|+
T Consensus 228 ~R~G~DL~~~~~Isl~eAllG~~v~VptL------dG-------~v~l~ip~gt~~g~~~rl~G~GmP~~-~~rGDL~v~ 293 (329)
T 3lz8_A 228 DIVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAV 293 (329)
T ss_dssp EEETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEE
T ss_pred EEcCCcEEEEEECCHHHHcCCCeEEEECC------CC-------CEEEEECCCCCCCCEEEEcCCCCCCC-CCCCCEEEE
Confidence 46789999999999999999999888765 56 36899999999999999999999865 468999999
Q ss_pred EEeeCCCCeee
Q 024831 162 IDEKPHSLFKR 172 (262)
Q Consensus 162 i~~~~h~~f~R 172 (262)
|+|.-......
T Consensus 294 ~~V~~P~~l~~ 304 (329)
T 3lz8_A 294 IKIVMPTKPDE 304 (329)
T ss_dssp EEECCCSSCCH
T ss_pred EEEECCCCCCH
Confidence 99976554443
No 15
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.72 E-value=6.8e-05 Score=56.65 Aligned_cols=32 Identities=9% Similarity=0.079 Sum_probs=29.3
Q ss_pred CCCEEEEEecchhhhccCceEEEEeeEEEEeC
Q 024831 85 AAPIERTLPCSLEDLYKGTTKKMKISRDVIDA 116 (262)
Q Consensus 85 g~di~~~l~itLee~~~G~~k~i~~~r~~~~~ 116 (262)
+.|++++|+|||||||+|++++|.+.+.+.|.
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~ 32 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCE 32 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECS
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECC
Confidence 35788999999999999999999999999984
No 16
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=34.29 E-value=19 Score=25.76 Aligned_cols=19 Identities=16% Similarity=0.587 Sum_probs=16.7
Q ss_pred EEeCCCCCCHHHHHHHHhh
Q 024831 242 NIKFPSKLTTEQKSGLKRL 260 (262)
Q Consensus 242 ~V~~P~~ls~~qk~~l~~~ 260 (262)
.+.||..|++.||..+-++
T Consensus 35 ~l~FP~sLs~~eR~~IH~l 53 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQI 53 (86)
T ss_dssp EEEECTTCCSHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHH
Confidence 6889999999999998765
No 17
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=21.68 E-value=2.3e+02 Score=20.36 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=44.7
Q ss_pred ccceEEEEEe--cHHHHhCCCEEEEec--CCCcEEEEeeCCccCCCcEEEEcCCCCCCCCCCCCCCCEEEEEE
Q 024831 174 GNDLVVTQKI--SLVEALTGYTVQLTT--LDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFN 242 (262)
Q Consensus 174 G~DL~~~~~I--~l~~Al~G~~i~i~t--ldG~~l~v~i~~~~~~g~~~~i~g~GmP~~~~~~~rGDL~V~~~ 242 (262)
+..|.+++.. +|.++|.+|.+.|+. |... +++.+++ +.|+...++.-+=.|... ..-.|++.|+
T Consensus 19 ~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~-~~~~~~~-v~pg~~~~~~~~~~P~~~---G~~~L~a~f~ 86 (102)
T 2xzz_A 19 GQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRP-KILNVGD-IGGNETVTLRQSFVPVRP---GPRQLIASLD 86 (102)
T ss_dssp SSCEEEEEEEECCSSSCBCSEEEEEEETTTEEE-EEEEECC-BCTTCEEEEEEEECCCSC---SSCCCEEEEE
T ss_pred CCeEEEEEEEECCCCCcccCEEEEEECCCCCcc-eEEEcCc-CCCCCEEEEEEEEecCcc---cceEEEEEEE
Confidence 5556555444 688999999888876 4433 6777755 899999999887777543 2345777775
No 18
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.27 E-value=2.4e+02 Score=20.76 Aligned_cols=61 Identities=11% Similarity=0.116 Sum_probs=36.3
Q ss_pred HHhCCCEEEEecCCCcEEEEeeCC------ccCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEeCCCCCCHHHHHHHHh
Q 024831 187 EALTGYTVQLTTLDGRTLTVPINS------VISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKR 259 (262)
Q Consensus 187 ~Al~G~~i~i~tldG~~l~v~i~~------~~~~g~~~~i~g~GmP~~~~~~~rGDL~V~~~V~~P~~ls~~qk~~l~~ 259 (262)
++|-+..+.|...||..+...||. -|.+|+.+.+.=. |.. ...+|+++-+ ++++|.+.|++
T Consensus 23 ~~lgn~~f~V~l~nG~~~la~i~GK~Rk~IwI~~GD~VlVe~~--~yd--~~~kg~Iv~r--------~~~~qvk~L~k 89 (111)
T 2dgy_A 23 RTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVDPI--EEG--EKVKAEISFV--------LCKDHVRSLQK 89 (111)
T ss_dssp ECCSSSEEEEECTTSCEEEEECCTTCCSCCCCCSSCEEEEEEC--SSC--SSCCEEEEEE--------CCHHHHHHHHH
T ss_pred EeCCCCEEEEEeCCCCEEEEEechhhcccEEEcCCCEEEEEec--ccC--CcceEEEEEE--------eCHHHHHHHHH
Confidence 455556677888888877777775 4567777777521 211 1245665443 34666666654
No 19
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=21.26 E-value=73 Score=21.89 Aligned_cols=23 Identities=35% Similarity=0.600 Sum_probs=17.1
Q ss_pred HhCCCEEEEecCCCcEEEEeeCC
Q 024831 188 ALTGYTVQLTTLDGRTLTVPINS 210 (262)
Q Consensus 188 Al~G~~i~i~tldG~~l~v~i~~ 210 (262)
.|.|..+.|.+++|+.+.|.+++
T Consensus 6 ~~~~~~i~v~~~~G~~~~l~v~~ 28 (88)
T 1sif_A 6 HLQGLQLFIKTLTGKTFTVEMEP 28 (88)
T ss_dssp ----CEEEEEETTSCEEEEECCT
T ss_pred cccceEEEEEeCCCCEEEEEECC
Confidence 46789999999999999988864
Done!