Query 024838
Match_columns 262
No_of_seqs 116 out of 1723
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 15:16:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024838.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024838hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i68_A Protein EMRE; transmemb 99.2 5.7E-12 2E-16 93.9 4.7 71 156-226 34-105 (137)
2 3b5d_A Multidrug transporter E 98.8 8.3E-09 2.8E-13 74.1 7.1 70 156-225 34-104 (110)
3 2i68_A Protein EMRE; transmemb 97.8 1.5E-05 5.2E-10 59.0 3.9 52 1-58 51-103 (137)
4 3b5d_A Multidrug transporter E 97.7 2.2E-05 7.6E-10 56.0 3.6 52 1-58 51-103 (110)
5 3rko_J NADH-quinone oxidoreduc 66.4 41 0.0014 25.6 13.6 35 193-227 127-163 (184)
6 3l1l_A Arginine/agmatine antip 60.1 35 0.0012 29.2 8.3 44 186-229 388-431 (445)
7 2xq2_A Sodium/glucose cotransp 51.2 1.4E+02 0.0048 27.0 12.9 31 190-220 532-562 (593)
8 2l2t_A Receptor tyrosine-prote 49.5 11 0.00039 21.4 2.2 16 214-229 25-40 (44)
9 2ks1_B Epidermal growth factor 45.7 14 0.00047 21.1 2.1 11 216-226 28-38 (44)
10 3b9w_A Ammonium transporter fa 45.4 1.5E+02 0.0051 25.6 10.7 63 152-215 260-329 (407)
11 4aps_A DI-OR tripeptide H+ sym 39.0 1.8E+02 0.0061 24.7 12.0 26 93-119 63-89 (491)
12 1zza_A Stannin, AG8_1; helix, 31.3 70 0.0024 20.1 3.9 18 210-227 25-42 (90)
13 4aps_A DI-OR tripeptide H+ sym 25.3 3.1E+02 0.011 23.2 11.2 14 210-223 457-470 (491)
14 2jo1_A Phospholemman; FXYD1, N 24.5 29 0.001 21.7 1.2 18 209-226 22-39 (72)
15 4djk_A Probable glutamate/gamm 23.9 3.5E+02 0.012 23.3 11.9 13 211-223 451-463 (511)
16 2hac_A T-cell surface glycopro 23.6 89 0.0031 16.4 2.8 24 12-35 8-31 (33)
17 2jp3_A FXYD domain-containing 23.5 27 0.00092 21.7 0.9 18 209-226 23-40 (67)
18 2zxe_G FXYD10, phospholemman-l 22.4 46 0.0016 21.1 1.8 19 209-227 25-43 (74)
19 3o7q_A L-fucose-proton symport 22.2 3.3E+02 0.011 22.4 11.1 35 92-127 69-103 (438)
No 1
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}
Probab=99.23 E-value=5.7e-12 Score=93.92 Aligned_cols=71 Identities=10% Similarity=0.233 Sum_probs=54.3
Q ss_pred HHhhhhhhHHHHHHHHHHhhcCceeeeeh-hchHHHHHHHHHHHHhccccchhhHhHHHHHHHHHhhheecc
Q 024838 156 YSGAVSSCLNLFIQLWCIEQRGPVFVTIF-NPLTTVIVAVAAYFLVGEKLHTGCILGGLIVIIGLYSLLWGK 226 (262)
Q Consensus 156 ~~gi~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~pv~a~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 226 (262)
.+++++++++|.+|++++++++++.+..+ ..+.|++++++++++++|++++.+++|++++++|+++....+
T Consensus 34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~ 105 (137)
T 2i68_A 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS 105 (137)
T ss_dssp CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 45667889999999999999999999998 899999999999999999999999999999999999987543
No 2
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*
Probab=98.83 E-value=8.3e-09 Score=74.10 Aligned_cols=70 Identities=10% Similarity=0.235 Sum_probs=64.1
Q ss_pred HHhhhhhhHHHHHHHHHHhhcCceeeeeh-hchHHHHHHHHHHHHhccccchhhHhHHHHHHHHHhhheec
Q 024838 156 YSGAVSSCLNLFIQLWCIEQRGPVFVTIF-NPLTTVIVAVAAYFLVGEKLHTGCILGGLIVIIGLYSLLWG 225 (262)
Q Consensus 156 ~~gi~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~pv~a~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~ 225 (262)
..++++.++++.++.+++|+++.+.+-.+ ..+.|+++.++++++++|++++.+++|.++++.|+++....
T Consensus 34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~ 104 (110)
T 3b5d_A 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34556778999999999999999999888 79999999999999999999999999999999999998754
No 3
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}
Probab=97.80 E-value=1.5e-05 Score=59.05 Aligned_cols=52 Identities=17% Similarity=0.307 Sum_probs=37.5
Q ss_pred CcccchhHHHHh-hhchHHHHHHHHHHHhhhcccccCCCcchhhhhHHHHhHHHHHHHH
Q 024838 1 MKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 58 (262)
Q Consensus 1 l~~~s~~~a~~i-~~~~pi~~~ll~~~~~~E~~~~~~~~~~~~~~g~~l~~~Gv~~l~~ 58 (262)
+++.+++.+..+ .++.|++++++++++++|++++++ ++|+.+.++|++++..
T Consensus 51 lk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~------~~Gi~LIi~GV~ll~~ 103 (137)
T 2i68_A 51 LAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL 103 (137)
T ss_dssp HC-----CHHHHHHHHHHHHHHHHHHHHHC------C------HHHHHHHHHHHHHHHH
T ss_pred HHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 367788888887 899999999999999999999999 9999999999998865
No 4
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*
Probab=97.71 E-value=2.2e-05 Score=56.01 Aligned_cols=52 Identities=17% Similarity=0.307 Sum_probs=46.9
Q ss_pred CcccchhHHHHh-hhchHHHHHHHHHHHhhhcccccCCCcchhhhhHHHHhHHHHHHHH
Q 024838 1 MKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 58 (262)
Q Consensus 1 l~~~s~~~a~~i-~~~~pi~~~ll~~~~~~E~~~~~~~~~~~~~~g~~l~~~Gv~~l~~ 58 (262)
+|+.+.+.+..+ ..+.|++++++++++++|++++++ ++|+.+.++|++++..
T Consensus 51 l~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~------~~Gi~lIi~Gv~~l~~ 103 (110)
T 3b5d_A 51 LAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL 103 (110)
T ss_pred HHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 367888899777 799999999999999999999998 9999999999988864
No 5
>3rko_J NADH-quinone oxidoreductase subunit J; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli}
Probab=66.40 E-value=41 Score=25.61 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=25.5
Q ss_pred HHHHHHHhccccchhhHhHHHHHH--HHHhhheeccc
Q 024838 193 AVAAYFLVGEKLHTGCILGGLIVI--IGLYSLLWGKE 227 (262)
Q Consensus 193 ~~~~~~~~~e~~~~~~~~G~~li~--~g~~l~~~~~~ 227 (262)
--+|..++++.+-+.+..+..+.+ .|.+...++++
T Consensus 127 ~~iG~~Lft~Y~lpFElaSvlLLvAmIGAIvLarr~~ 163 (184)
T 3rko_J 127 KAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREER 163 (184)
T ss_dssp HHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 467888999999999999987654 56555554443
No 6
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=60.15 E-value=35 Score=29.23 Aligned_cols=44 Identities=7% Similarity=-0.114 Sum_probs=23.4
Q ss_pred chHHHHHHHHHHHHhccccchhhHhHHHHHHHHHhhheecccCc
Q 024838 186 PLTTVIVAVAAYFLVGEKLHTGCILGGLIVIIGLYSLLWGKEGD 229 (262)
Q Consensus 186 ~~~pv~a~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~ 229 (262)
..-++++.++..+..-..-....+.|..+++.|+.++.+.++++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~~~~~~ 431 (445)
T 3l1l_A 388 LAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRL 431 (445)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 34444454444433222222345568888888887776544433
No 7
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=51.21 E-value=1.4e+02 Score=26.96 Aligned_cols=31 Identities=23% Similarity=0.152 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhccccchhhHhHHHHHHHHHh
Q 024838 190 VIVAVAAYFLVGEKLHTGCILGGLIVIIGLY 220 (262)
Q Consensus 190 v~a~~~~~~~~~e~~~~~~~~G~~li~~g~~ 220 (262)
...++.-++++.+.....-.+...++++|++
T Consensus 532 ~~~~~~~~~~f~~~~~~~i~l~v~~~~~~~~ 562 (593)
T 2xq2_A 532 MIVLAVLYTLFWVNADAEITLIIFGVMAGVI 562 (593)
T ss_dssp HHHHHHHHHHHHHCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 4455556667777777777778888888766
No 8
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=49.45 E-value=11 Score=21.40 Aligned_cols=16 Identities=19% Similarity=0.044 Sum_probs=6.6
Q ss_pred HHHHHHhhheecccCc
Q 024838 214 IVIIGLYSLLWGKEGD 229 (262)
Q Consensus 214 li~~g~~l~~~~~~~~ 229 (262)
++.++.+++.++++++
T Consensus 25 ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 25 IVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHhhhhhhh
Confidence 3333344444444333
No 9
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=45.70 E-value=14 Score=21.06 Aligned_cols=11 Identities=9% Similarity=0.311 Sum_probs=4.3
Q ss_pred HHHHhhheecc
Q 024838 216 IIGLYSLLWGK 226 (262)
Q Consensus 216 ~~g~~l~~~~~ 226 (262)
.++.+++.+++
T Consensus 28 ~~~~~~~~RRr 38 (44)
T 2ks1_B 28 ALGIGLFMRRR 38 (44)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHhhhh
Confidence 33334444433
No 10
>3b9w_A Ammonium transporter family; membrane protein, ammonia transport, rhesus protein, transpo protein; HET: BOG; 1.30A {Nitrosomonas europaea} PDB: 3bhs_A 3b9y_A* 3b9z_A*
Probab=45.43 E-value=1.5e+02 Score=25.58 Aligned_cols=63 Identities=10% Similarity=0.054 Sum_probs=33.9
Q ss_pred HHHHHHhhhhhhHHHHHHHH----H---HhhcCceeeeehhchHHHHHHHHHHHHhccccchhhHhHHHHH
Q 024838 152 WCIIYSGAVSSCLNLFIQLW----C---IEQRGPVFVTIFNPLTTVIVAVAAYFLVGEKLHTGCILGGLIV 215 (262)
Q Consensus 152 ~~~~~~gi~~~~~~~~~~~~----~---~~~~~~~~~s~~~~~~pv~a~~~~~~~~~e~~~~~~~~G~~li 215 (262)
+..+..|++++.+++..... . ++.-++.-+-.+-.+-=+++.+...+ +....+..|++|.+.+
T Consensus 260 ~~A~iIG~iaG~i~~~~~~~l~~~l~~~l~iDD~l~a~~vHgv~Gi~G~l~~gl-fa~~~~~~Ql~g~~~~ 329 (407)
T 3b9w_A 260 VGAFVIGLLGGAISVVGFVFIQPMLESKAKTIDTCGVHNLHGLPGLLGGFSAIL-IVPGIAVAQLTGIGIT 329 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHSCCCCTTCHHHHTTHHHHHHHHHHHH-HSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCeecchHHHHHHHHHHHH-HccCCcHHHHHHHHHH
Confidence 33445566666666655432 1 23334444444444555666666554 3333355688887665
No 11
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=38.99 E-value=1.8e+02 Score=24.69 Aligned_cols=26 Identities=4% Similarity=-0.124 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHhhhh-cCChhHHHH
Q 024838 93 SCILWSSFYIMQAFTLKK-YPAKLSISA 119 (262)
Q Consensus 93 a~~~~a~~~v~~~~~~~~-~~~~~~~~~ 119 (262)
..+...+......++.++ . .......
T Consensus 63 ~~~~~~~~~~~~g~l~dr~~-g~r~~~~ 89 (491)
T 4aps_A 63 YASMVYLSGTIGGFVADRII-GARPAVF 89 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccc-cchHHHH
Confidence 344445555555555666 5 4333333
No 12
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=31.26 E-value=70 Score=20.14 Aligned_cols=18 Identities=17% Similarity=0.141 Sum_probs=11.9
Q ss_pred hHHHHHHHHHhhheeccc
Q 024838 210 LGGLIVIIGLYSLLWGKE 227 (262)
Q Consensus 210 ~G~~li~~g~~l~~~~~~ 227 (262)
......++|+|++.+-.+
T Consensus 25 aalg~li~gcwcylrlqr 42 (90)
T 1zza_A 25 AALGALILGCWCYLRLQR 42 (90)
T ss_dssp HHHHHHHHHHHTTTSSCS
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344556788888876544
No 13
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=25.28 E-value=3.1e+02 Score=23.15 Aligned_cols=14 Identities=21% Similarity=0.413 Sum_probs=5.9
Q ss_pred hHHHHHHHHHhhhe
Q 024838 210 LGGLIVIIGLYSLL 223 (262)
Q Consensus 210 ~G~~li~~g~~l~~ 223 (262)
.+...++.++++..
T Consensus 457 ~~~~~~~~~~~~~~ 470 (491)
T 4aps_A 457 FGLGSVVLGIVLVF 470 (491)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444433
No 14
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=24.52 E-value=29 Score=21.75 Aligned_cols=18 Identities=22% Similarity=0.691 Sum_probs=11.6
Q ss_pred HhHHHHHHHHHhhheecc
Q 024838 209 ILGGLIVIIGLYSLLWGK 226 (262)
Q Consensus 209 ~~G~~li~~g~~l~~~~~ 226 (262)
++++++.+.|++++..+|
T Consensus 22 ifA~vLfi~GI~iilS~K 39 (72)
T 2jo1_A 22 VIAGILFILGILIVLSRR 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCc
Confidence 456667777777766444
No 15
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=23.95 E-value=3.5e+02 Score=23.28 Aligned_cols=13 Identities=23% Similarity=0.427 Sum_probs=5.2
Q ss_pred HHHHHHHHHhhhe
Q 024838 211 GGLIVIIGLYSLL 223 (262)
Q Consensus 211 G~~li~~g~~l~~ 223 (262)
+..+++.++..+.
T Consensus 451 ~~~~~~~~i~~~~ 463 (511)
T 4djk_A 451 VSFLVVLALPFIL 463 (511)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333444444433
No 16
>2hac_A T-cell surface glycoprotein CD3 zeta chain; transmembrane, alpha helix, membrane protein; NMR {Homo sapiens}
Probab=23.65 E-value=89 Score=16.38 Aligned_cols=24 Identities=8% Similarity=0.026 Sum_probs=16.7
Q ss_pred hhhchHHHHHHHHHHHhhhccccc
Q 024838 12 VVNTIPCMTFIIAVVFRLEIVDVR 35 (262)
Q Consensus 12 i~~~~pi~~~ll~~~~~~E~~~~~ 35 (262)
+...--+...++..++.+||+...
T Consensus 8 LDgiL~iYgii~T~Ly~R~K~~~~ 31 (33)
T 2hac_A 8 LDGILFIYGVILTALFLRVKFSRS 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcc
Confidence 334445677788888898888753
No 17
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=23.49 E-value=27 Score=21.71 Aligned_cols=18 Identities=50% Similarity=0.807 Sum_probs=12.1
Q ss_pred HhHHHHHHHHHhhheecc
Q 024838 209 ILGGLIVIIGLYSLLWGK 226 (262)
Q Consensus 209 ~~G~~li~~g~~l~~~~~ 226 (262)
++++++.+.|++++..+|
T Consensus 23 ifA~vLfi~GI~iilS~k 40 (67)
T 2jp3_A 23 IFGGLLCIAGIALALSGK 40 (67)
T ss_dssp HHHHHHHHHHHHHHHTTH
T ss_pred hhHHHHHHHHHHHHHcCc
Confidence 456677778877776554
No 18
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=22.39 E-value=46 Score=21.08 Aligned_cols=19 Identities=37% Similarity=0.642 Sum_probs=12.7
Q ss_pred HhHHHHHHHHHhhheeccc
Q 024838 209 ILGGLIVIIGLYSLLWGKE 227 (262)
Q Consensus 209 ~~G~~li~~g~~l~~~~~~ 227 (262)
++++++.+.|++++..+|-
T Consensus 25 ifA~vLfi~GI~iilS~kc 43 (74)
T 2zxe_G 25 IVAAVLCVIGIIILLAGKC 43 (74)
T ss_dssp HHHHHHHHHHHHHHTTTC-
T ss_pred hhHHHHHHHHHHHHHcCcc
Confidence 4566777888887775553
No 19
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=22.22 E-value=3.3e+02 Score=22.39 Aligned_cols=35 Identities=14% Similarity=-0.149 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHhhhhcCChhHHHHHHHHHHHH
Q 024838 92 ASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAA 127 (262)
Q Consensus 92 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v 127 (262)
+..+.+.+......++.++. +............++
T Consensus 69 ~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~ 103 (438)
T 3o7q_A 69 AFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYAL 103 (438)
T ss_dssp HHHHHHHTTHHHHHHHHHHS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHh-cchHHHHHHHHHHHH
Confidence 34444555555555666666 444444443333333
Done!